RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ERCC8 (Homo sapiens)

Ensembl gene IDs: ENSG00000049167

Ensembl transcript IDs: ENST00000265038.10, ENST00000381118.7, ENST00000439176.6, ENST00000477893.1, ENST00000495985.5, ENST00000497892.6, ENST00000643034.1, ENST00000643708.1, ENST00000647431.1, ENST00000647486.1, ENST00000675042.2, ENST00000675229.1, ENST00000675378.1, ENST00000675452.2, ENST00000675920.1, ENST00000676185.1, ENST00000682041.1, ENST00000682217.1, ENST00000682246.1, ENST00000682375.1, ENST00000682380.1, ENST00000682418.1, ENST00000682750.1, ENST00000682874.1, ENST00000683199.1, ENST00000683216.1, ENST00000683460.1, ENST00000683688.1, ENST00000684394.1, ENST00000684453.1, ENST00000684621.1

Found 624 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GATGATACCATCATGCAGGGTGTAGAGAAGCTGGAATTAAGTGTTTaGGCCACATGGGAGAAGCAGCTCTCCTGCTCCTGGTGGTGTTTT +
Preference number: 1 (lower is better)
Translates to: DDTIMQGVEKLELSV*ATWEKQLSCSWWCF
Trigger: AAAACACCACCAGGAGCAGGAGAGCTGCTTCTCCCATGTGGCTCAAACACTTAATTCCAGCTTCTCTACACCCTGCATGATGGTATCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR CCA 90 bp AAGTTTACCAGTATCTTCATGAGGAGTGGTCAGTCAAGAGGACATTaGGCACCTGAAAAGTCCTACACACAGAGAACTAAGAGAGGTCGC +
Preference number: 1 (lower is better)
Translates to: KFTSIFMRSGQSRGH*APEKSYTQRTKRGR
Trigger: GCGACCTCTCTTAGTTCTCTGTGTGTAGGACTTTTCAGGTGCCCAATGTCCTCTTGACTGACCACTCCTCATGAAGATACTGGTAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR TCA 90 bp AGAGCGGTTATCAATCCACTAGCACAAAGTTTACCAGTATCTTCATaGGGAGTGGTCAGTCAAGAGGACATTGGGCACCTGAAAAGTCCT +
Preference number: 1 (lower is better)
Translates to: RAVINPLAQSLPVSS*GVVSQEDIGHLKSP
Trigger: AGGACTTTTCAGGTGCCCAATGTCCTCTTGACTGACCACTCCTCATGAAGATACTGGTAAACTTTGTGCTAGTGGATTGATAACCGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR GCA 90 bp GATCTGCCTGTCTCAGCTCACAAAGTGTTAGGATTACAACCACCGTaGCCGGCCAATAGCTTTTTCAAACTAGCTTTTTCAAAGGTCAAA +
Preference number: 1 (lower is better)
Translates to: DLPVSAHKVLGLQPP*PANSFFKLAFSKVK
Trigger: TTTGACCTTTGAAAAAGCTAGTTTGAAAAAGCTATTGGCCGGGCACGGTGGTTGTAATCCTAACACTTTGTGAGCTGAGACAGGCAGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR TCA 90 bp GACAAGCTCTCATTTAGTACTGTTGCTAATCCTTGCCACAATGGATaGAATGAACAAAAGAAAACTGGCTTGTGCCAGTCACCTGAGCCA +
Preference number: 1 (lower is better)
Translates to: DKLSFSTVANPCHNG*NEQKKTGLCQSPEP
Trigger: TGGCTCAGGTGACTGGCACAAGCCAGTTTTCTTTTGTTCATTTCATCCATTGTGGCAAGGATTAGCAACAGTACTAAATGAGAGCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR GCA 90 bp CATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTaGAGTCTCTGCTACCACTATAAAGTTCCTGGAAATTTGACTGAA +
Preference number: 1 (lower is better)
Translates to: HQELVHIRMEPKPEC*SLCYHYKVPGNLTE
Trigger: TTCAGTCAAATTTCCAGGAACTTTATAGTGGTAGCAGAGACTGCAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR GCA 90 bp CATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTaGAGTCTCTGCTACCACTATAAAGTTCCTACAAAACAGGGAAAA +
Preference number: 1 (lower is better)
Translates to: HQELVHIRMEPKPEC*SLCYHYKVPTKQGK
Trigger: TTTTCCCTGTTTTGTAGGAACTTTATAGTGGTAGCAGAGACTGCAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675378.1
3UTR GCA 90 bp CTCTGCCAATGGAACACACTGCTTTACATGTGTAATAAGATTGTCTaGTGGAGTTCTCAAGGTCATAAAGTACAATCACACCATCTGAAC +
Preference number: 1 (lower is better)
Translates to: LCQWNTLLYMCNKIV*WSSQGHKVQSHHLN
Trigger: GTTCAGATGGTGTGATTGTACTTTATGACCTTGAGAACTCCAGCAGACAATCTTATTACACATGTAAAGCAGTGTGTTCCATTGGCAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
3UTR GCA 90 bp CTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTGCAGTCTCTaGTACCACTATAAAGTTCCTACAAAACAGGGAAAATACCAACTA +
Preference number: 1 (lower is better)
Translates to: LVHIRMEPKPECCSL*YHYKVPTKQGKYQL
Trigger: TAGTTGGTATTTTCCCTGTTTTGTAGGAACTTTATAGTGGTAGCAGAGACTGCAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675378.1
3UTR TCA 90 bp GCAGTGTTTGCTGATTCAACAGCTTGTGACTTTTTCCCATTATGTTaGTCAAGAGTAATCAAACATCCTGATGCTCTTCTCACATCCCAT +
Preference number: 1 (lower is better)
Translates to: AVFADSTACDFFPLC*SRVIKHPDALLTSH
Trigger: ATGGGATGTGAGAAGAGCATCAGGATGTTTGATTACTCTTGATCAACATAATGGGAAAAAGTCACAAGCTGTTGAATCAGCAAACACTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000647486.1
3UTR CCA 90 bp TATATAGGATTGCAATATGAAAGAACACAGTCTAGGTTAATAACTTaGTTTGTGGCAGCAGGGGTAAGGACTGGGGAATGTGGTACTAAT +
Preference number: 1 (lower is better)
Translates to: YIGLQYERTQSRLIT*FVAAGVRTGECGTN
Trigger: ATTAGTACCACATTCCCCAGTCCTTACCCCTGCTGCCACAAACCAAGTTATTAACCTAGACTGTGTTCTTTCATATTGCAATCCTATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR GCA 90 bp GACAAAAAGGTACTAAAGATGATATTCATCCTTCTTCATCACTGCTaGTCCAGGCATCTTCAAAGGCCGGATTTAATTGTGATTTTGTTG +
Preference number: 1 (lower is better)
Translates to: DKKVLKMIFILLHHC*SRHLQRPDLIVILL
Trigger: CAACAAAATCACAATTAAATCCGGCCTTTGAAGATGCCTGGAGCAGCAGTGATGAAGAAGGATGAATATCATCTTTAGTACCTTTTTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
3UTR GCA 90 bp AGAGACAAAAAGGTACTAAAGATGATATTCATCCTTCTTCATCACTaGTGCTCCAGGCATCTTCAAAGGCCGGATTTAATTGTGATTTTG +
Preference number: 1 (lower is better)
Translates to: RDKKVLKMIFILLHH*CSRHLQRPDLIVIL
Trigger: CAAAATCACAATTAAATCCGGCCTTTGAAGATGCCTGGAGCAGCAGTGATGAAGAAGGATGAATATCATCTTTAGTACCTTTTTGTCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
3UTR GCA 90 bp GGCTTATATCCAAAGGATATGAAATCAGTATGTCAAAGAGATATCTaGACTACCAGGTTCACTGCAGCATTATTCACAATAGCCAGGATA +
Preference number: 1 (lower is better)
Translates to: GLYPKDMKSVCQRDI*TTRFTAALFTIARI
Trigger: TATCCTGGCTATTGTGAATAATGCTGCAGTGAACCTGGTAGTGCAGATATCTCTTTGACATACTGATTTCATATCCTTTGGATATAAGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR CCA 90 bp AGCCAAGACAGCGTGAAAGGAAAACATATAAAATGTACAAGGCACTaGAGAGAAGTTATACATGATCGCTGCCTTCATAATAGATTCATT +
Preference number: 1 (lower is better)
Translates to: SQDSVKGKHIKCTRH*REVIHDRCLHNRFI
Trigger: AATGAATCTATTATGAAGGCAGCGATCATGTATAACTTCTCTCCAGTGCCTTGTACATTTTATATGTTTTCCTTTCACGCTGTCTTGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR TCA 90 bp GTCAACAGTTTTATAATGTCCCTTAAGCATAGTTATCTGTTCTCCTaGGTAAACTGTATAAACAGCAATGGTGCTACCATATGGTACAAA +
Preference number: 1 (lower is better)
Translates to: VNSFIMSLKHSYLFS*VNCINSNGATIWYK
Trigger: TTTGTACCATATGGTAGCACCATTGCTGTTTATACAGTTTACTCAGGAGAACAGATAACTATGCTTAAGGGACATTATAAAACTGTTGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000647486.1
3UTR TCA 90 bp AAAGACAGTTCTCAAAAGAAGACATGCAAATGGCCAGCAGATATATaGAAAAATTATCAACATCAGCAGTCACCAGGGAAATGCAAATTA +
Preference number: 1 (lower is better)
Translates to: KDSSQKKTCKWPADI*KNYQHQQSPGKCKL
Trigger: TAATTTGCATTTCCCTGGTGACTGCTGATGTTGATAATTTTTTCATATATCTGCTGGCCATTTGCATGTCTTCTTTTGAGAACTGTCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR-3UTR TCA 90 bp CAGAAGAGCATGAACTCGGAGAGCGGTTATCAATCCACTAGCACAAAGTTTACCAGTGATTCCCCAGCCTaGGTCTCCCAAGTAGCTGGG +
Preference number: 2 (lower is better)
Translates to: QKSMNSESGYQSTSTKFTSDSPA*VSQVAG
Trigger: CCCAGCTACTTGGGAGACTCAGGCTGGGGAATCACT...GGTAAACTTTGTGCTAGTGGATTGATAACCGCTCTCCGAGTTCATGCTCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR-3UTR TCA 90 bp TGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAGGCAGGAGAATTGCTTaGACCTGGGAGGTGAAGGTT +
Preference number: 2 (lower is better)
Translates to: CYLYCSNEGFPRPQHLGSGRRIA*TWEVKV
Trigger: AACCTTCACCTCCCAGGTTCAAGCAATTCTCCTGCC...TGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR-3UTR GCA 90 bp GGAGTGGTCAGTCAAGAGGACATTGGGCACCTGAAAAGTCCTACACACAGAGAACTGAGGCAGGAAAATTaGTTGAACCTGGGAAGCGGA +
Preference number: 2 (lower is better)
Translates to: GVVSQEDIGHLKSPTHRELRQEN*LNLGSG
Trigger: TCCGCTTCCCAGGTTCAAGCAATTTTCCTGCCTCAG...TTCTCTGTGTGTAGGACTTTTCAGGTGCCCAATGTCCTCTTGACTGACCACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR-3UTR TCA 90 bp TACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACAGCTGAAGGTCACAACTaGGGTACAACGACTTGTGTT +
Preference number: 2 (lower is better)
Translates to: YCSNEGFPRPQHLGSRNTAEGHN*GTTTCV
Trigger: AACACAAGTCGTTGTACCTCAGTTGTGACCTTCAGC...TGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
ENST00000676185.1
3UTR-3UTR TCA 90 bp GTGGCAGCAGGGGTAAGGACTGGGGAATGTGGTACTAATGTGGAAAGAGAGGGGGTTAAAAGCCTCCTGTaGTGCACATTTTGGATAGTA +
Preference number: 2 (lower is better)
Translates to: VAAGVRTGECGTNVEREGVKSLL*CTFWIV
Trigger: TACTATCCAAAATGTGCATCACAGGAGGCTTTTAAC...CCCCTCTCTTTCCACATTAGTACCACATTCCCCAGTCCTTACCCCTGCTGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR-3UTR TCA 90 bp TGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAGCTGAAGGTCACAACTaGGGTACAACGACTTGTGTT +
Preference number: 2 (lower is better)
Translates to: CYLYCSNEGFPRPQHLGSAEGHN*GTTTCV
Trigger: AACACAAGTCGTTGTACCTCAGTTGTGACCTTCAGC...TGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
ENST00000676185.1
3UTR-3UTR TCA 90 bp CTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTGCAGTCTCTGCTACCACTATCTGTACCAACAGTaGGGAGGTGAAGTCCATCAC +
Preference number: 2 (lower is better)
Translates to: LVHIRMEPKPECCSLCYHYLYQQ*GGEVHH
Trigger: GTGATGGACTTCACCTCCTCACTGTTGGTACAGATA...GTGGTAGCAGAGACTGCAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR GCA 90 bp GTGGCAGCAGGGGTAAGGACTGGGGAATGTGGTACTAATGTGGAAAGAGAGGGGTCTCAAAAGAAGACATaGAAATGGCCAGCAGATATA +
Preference number: 2 (lower is better)
Translates to: VAAGVRTGECGTNVEREGSQKKT*KWPADI
Trigger: TATATCTGCTGGCCATTTGCATGTCTTCTTTTGAGA...CCCCTCTCTTTCCACATTAGTACCACATTCCCCAGTCCTTACCCCTGCTGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR CAA 90 bp GGAGAAGCAGCTCTCCTGCTCCTGGTGGTGTTTTTACAGAAGGTGTaGACAAGCTCTCATTTAGTACTGTTGCTAATCCTTGCCACAATG +
Preference number: 2 (lower is better)
Translates to: GEAALLLLVVFLQKV*TSSHLVLLLILATM
Trigger: CATTGTGGCAAGGATTAGCAACAGTACTAAATGAGAGCTTGTCAACACCTTCTGTAAAAACACCACCAGGAGCAGGAGAGCTGCTTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR-3UTR TCA 90 bp TGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGAGAAAGTCAATACTaGTGGCCTCCACTTGCTGAT +
Preference number: 2 (lower is better)
Translates to: CYLYCSNEGFPRPQHLGSRESQY*WPPLAD
Trigger: ATCAGCAAGTGGAGGCCATCAGTATTGACTTTCTCT...TGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
ENST00000676185.1
3UTR-3UTR TCA 90 bp AGGTACAACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAAATGAGCTTGATGTaGACATGCCAGTGTCATGAG +
Preference number: 2 (lower is better)
Translates to: RYNDLCYLYCSNEGFPRPQMSLM*TCQCHE
Trigger: CTCATGACACTGGCATGTTCACATCAAGCTCATTTG...TGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTTGTACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
3UTR-3UTR GCA 90 bp AACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTTCTTCATCACTGCTaGTCCAGGCATCTTCAAAGG +
Preference number: 2 (lower is better)
Translates to: NDLCYLYCSNEGFPRPQHLLHHC*SRHLQR
Trigger: CCTTTGAAGATGCCTGGAGCAGCAGTGATGAAGAAG...ATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
3UTR-3UTR GCA 90 bp TGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAATCCTTCTTCATCACTaGTGCTCCAGGCATCTTCAA +
Preference number: 2 (lower is better)
Translates to: CYLYCSNEGFPRPQHLGSILLHH*CSRHLQ
Trigger: TTGAAGATGCCTGGAGCAGCAGTGATGAAGAAGGAT...TGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
3UTR-3UTR TCA 90 bp CTTCATCACTGCTGCTCCAGGCATCTTCAAAGGCCGGATTTAATTGTGATTTTGGCTGAAGGTCACAACTaGGGTACAACGACTTGTGTT +
Preference number: 2 (lower is better)
Translates to: LHHCCSRHLQRPDLIVILAEGHN*GTTTCV
Trigger: AACACAAGTCGTTGTACCTCAGTTGTGACCTTCAGC...CAAAATCACAATTAAATCCGGCCTTTGAAGATGCCTGGAGCAGCAGTGATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
3UTR-3UTR TCA 90 bp ATTCCAGAGCCTCATTCGATTATCTGTACCAACAGTGAGGAGGTGAAGTCCATCAGAGAAAGTCAATACTaGTGGCCTCCACTTGCTGAT +
Preference number: 2 (lower is better)
Translates to: IPEPHSIICTNSEEVKSIRESQY*WPPLAD
Trigger: ATCAGCAAGTGGAGGCCATCAGTATTGACTTTCTCT...GATGGACTTCACCTCCTCACTGTTGGTACAGATAATCGAATGAGGCTCTGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR TCA 90 bp GCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTGACGATAGTAGGAGACATTaGGCCCCAAAATGTTTAACA +
Preference number: 2 (lower is better)
Translates to: AMRAFPGHNIWDQGTHFDDSRRH*APKCLT
Trigger: TGTTAAACATTTTGGGGCTCAATGTCTCCTACTATC...GTCAAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
ENST00000676185.1
3UTR-3UTR TCA 90 bp TGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACAGTTAAAAGCCTCCTGTaGTGCACATTTTGGATAGTA +
Preference number: 2 (lower is better)
Translates to: CTVAMRAFPGHNIWDQGTVKSLL*CTFWIV
Trigger: TACTATCCAAAATGTGCATCACAGGAGGCTTTTAAC...TGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
ENST00000676185.1
3UTR-3UTR TCA 90 bp TGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACGTCCTTTTTGTATCTaGAATCAGTTTGGCTGGATA +
Preference number: 2 (lower is better)
Translates to: CTVAMRAFPGHNIWDQGTRPFCI*NQFGWI
Trigger: TATCCAGCCAAACTGATTTCAGATACAAAAAGGACG...TGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381118.7
3UTR-3UTR TCA 90 bp TGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACAGAGAACAACAGTCTCTaGATTCTTGTGTTGTTGACA +
Preference number: 2 (lower is better)
Translates to: CTVAMRAFPGHNIWDQGTENNSL*ILVLLT
Trigger: TGTCAACAACACAAGAATTCAGAGACTGTTGTTCTC...TGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381118.7
3UTR-3UTR TCA 90 bp CTTCATCACTGCTGCTCCAGGCATCTTCAAAGGCCGGATTTAATTGTGATTTTGAACATGCCAGTGTCATaGGGATACCACTGTACAGTC +
Preference number: 2 (lower is better)
Translates to: LHHCCSRHLQRPDLIVILNMPVS*GYHCTV
Trigger: GACTGTACAGTGGTATCCTCATGACACTGGCATGTT...CAAAATCACAATTAAATCCGGCCTTTGAAGATGCCTGGAGCAGCAGTGATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
3UTR-3UTR TCA 90 bp CTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTGCAGTCTCTGCTACCACTACAAAAACAAATTCTaGACTGCAGCCACAGGAGAC +
Preference number: 2 (lower is better)
Translates to: LVHIRMEPKPECCSLCYHYKNKF*TAATGD
Trigger: GTCTCCTGTGGCTGCAGTTCAGAATTTGTTTTTGTA...GTGGTAGCAGAGACTGCAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR GCA 90 bp AACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCATCAGGATGATCTCTaGCAATGGAACACACTGCTT +
Preference number: 2 (lower is better)
Translates to: NDLCYLYCSNEGFPRPQHHQDDL*QWNTLL
Trigger: AAGCAGTGTGTTCCATTGGCAGAGATCATCCTGATG...ATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
3UTR-3UTR GCA 90 bp GGAGTGGTCAGTCAAGAGGACATTGGGCACCTGAAAAGTCCTACACACAGAGAAAAAACATGGAGAAAATaGTCCATGACATTGGTCTGG +
Preference number: 2 (lower is better)
Translates to: GVVSQEDIGHLKSPTHREKTWRK*SMTLVW
Trigger: CCAGACCAATGTCATGGAGCATTTTCTCCATGTTTT...TTCTCTGTGTGTAGGACTTTTCAGGTGCCCAATGTCCTCTTGACTGACCACTCC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR-3UTR CCA 90 bp TCTAGTACCAACTGCTACCAAACAGTGCTTGGTGGAGACTGGAGACATATGATGCCAGGCCACAACATCTaGGATCAAGGAACACATTTT +
Preference number: 2 (lower is better)
Translates to: SSTNCYQTVLGGDWRHMMPGHNI*DQGTHF
Trigger: AAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGG...CATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTGGTACTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR CCA 90 bp AACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTACCAAACAGTGCTTaGTGGAGACTGGAGACATAT +
Preference number: 2 (lower is better)
Translates to: NDLCYLYCSNEGFPRPQHLPNSA*WRLETY
Trigger: ATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAG...ATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR CCA 90 bp AGTGCTTGGTGGAGACTGGAGACATATGATGACTATAAACTGTTTCCTCAAAATTTTGAGAGGCCGAGGTaGGTGGATCAACGGAGGTCA +
Preference number: 2 (lower is better)
Translates to: SAWWRLETYDDYKLFPQNFERPR*VDQRRS
Trigger: TGACCTCCGTTGATCCACCCACCTCGGCCTCTCAAA...ATTTTGAGGAAACAGTTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643708.1
3UTR-3UTR CCA 90 bp ATAATCATTCTTGGCAAAATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTATTAACCGGGCGCAGTaGCGGGAGCCTGTAATCCCA +
Preference number: 2 (lower is better)
Translates to: IIILGKIILKGGNEQADSINRAQ*REPVIP
Trigger: TGGGATTACAGGCTCCCGCCACTGCGCCCGGTTAAT...ACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGATTTTGCCAAGAATGATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR-3UTR TCA 90 bp AACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATGTTCATAAAATCTGCTaGAGGTCACAACTGAGGTAC +
Preference number: 2 (lower is better)
Translates to: NDLCYLYCSNEGFPRPQHVHKIC*RSQLRY
Trigger: GTACCTCAGTTGTGACCTTCAGCAGATTTTATGAAC...ATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
ENST00000676185.1
3UTR-3UTR TCA 90 bp CATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTGCAGTCTCGTTCATAAAATCTGCTaGAGGTCACAACTGAGGTAC +
Preference number: 2 (lower is better)
Translates to: HQELVHIRMEPKPECCSLVHKIC*RSQLRY
Trigger: GTACCTCAGTTGTGACCTTCAGCAGATTTTATGAAC...GAGACTGCAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
3UTR-3UTR TCA 90 bp GCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTGACGTCATTCTGGTTGAATaGTTTCATTCTCTGGTTGAT +
Preference number: 2 (lower is better)
Translates to: AMRAFPGHNIWDQGTHFDVILVE*FHSLVD
Trigger: ATCAACCAGAGAATGAAATCATTCAACCAGAATGAC...GTCAAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
3UTR-3UTR TCA 90 bp AACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATAGTAATCAAACATCCTaGTGCTCTTCTCACATCCCA +
Preference number: 2 (lower is better)
Translates to: NDLCYLYCSNEGFPRPQHSNQTS*CSSHIP
Trigger: TGGGATGTGAGAAGAGCATCAGGATGTTTGATTACT...ATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR TCA 90 bp AGGTACAACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCATCCTGGAAATTTGACTaGAATACACAGCAGTCAACA +
Preference number: 2 (lower is better)
Translates to: RYNDLCYLYCSNEGFPRPSWKFD*NTQQST
Trigger: TGTTGACTGCTGTGTATTTCAGTCAAATTTCCAGGA...TGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTTGTACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR GCA 90 bp TGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACAGCCAATGGAACACACTaGTTTACATGTGTAATAAGA +
Preference number: 2 (lower is better)
Translates to: CTVAMRAFPGHNIWDQGTANGTH*FTCVIR
Trigger: TCTTATTACACATGTAAAGCAGTGTGTTCCATTGGC...TGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
3UTR-3UTR GCA 90 bp AGGTACAACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCAGAATGTTGCAGTCTCTaGTACCACTATAAAGTTCCT +
Preference number: 2 (lower is better)
Translates to: RYNDLCYLYCSNEGFPRPECCSL*YHYKVP
Trigger: AGGAACTTTATAGTGGTAGCAGAGACTGCAACATTC...TGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTTGTACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
3UTR-3UTR CCA 90 bp GAATGTGAGAACAGGATCCAGACTTCAAGTCACAAAGTTGTACTTTGGGTCCTCCCAGGCCACAACATCTaGGATCAAGGAACACATTTT +
Preference number: 2 (lower is better)
Translates to: ECENRIQTSSHKVVLWVLPGHNI*DQGTHF
Trigger: AAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGG...GAGGACCCAAAGTACAACTTTGTGACTTGAAGTCTGGATCCTGTTCTCACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR CCA 90 bp AAGTCACAAAGTTGTACTTTGGGTCCTCTAGTACCAACTGCTACCAAACAGTGCCCAGGCCACAACATCTaGGATCAAGGAACACATTTT +
Preference number: 2 (lower is better)
Translates to: KSQSCTLGPLVPTATKQCPGHNI*DQGTHF
Trigger: AAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGG...GCACTGTTTGGTAGCAGTTGGTACTAGAGGACCCAAAGTACAACTTTGTGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR CCA 90 bp TTGGGTCCTCTAGTACCAACTGCTACCAAACAGTGCTTGGTGGAGACTGGAGACAATGATTTCATTCTCTaGTTGATTCCTAAGGAATGG +
Preference number: 2 (lower is better)
Translates to: LGPLVPTATKQCLVETGDNDFIL*LIPKEW
Trigger: CCATTCCTTAGGAATCAACCAGAGAATGAAATCATT...GTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTGGTACTAGAGGACCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381118.7
3UTR-3UTR TCA 90 bp ATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGGCTGAAGGTCACAACTaGGGTACAACGACTTGTGTT +
Preference number: 2 (lower is better)
Translates to: IILKGGNEQADSTASKRKAEGHN*GTTTCV
Trigger: AACACAAGTCGTTGTACCTCAGTTGTGACCTTCAGC...CTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
ENST00000676185.1
3UTR-3UTR TCA 90 bp CATCATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTGCAGTGTTCATAAAATCTGCTaGAGGTCACAACTGAGGTAC +
Preference number: 2 (lower is better)
Translates to: HHQELVHIRMEPKPECCSVHKIC*RSQLRY
Trigger: GTACCTCAGTTGTGACCTTCAGCAGATTTTATGAAC...ACTGCAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
3UTR-3UTR TCA 90 bp TCTTCATCACTGCTGCTCCAGGCATCTTCAAAGGCCGGATTTAATTGTGATTTTAGAGAAAGTCAATACTaGTGGCCTCCACTTGCTGAT +
Preference number: 2 (lower is better)
Translates to: SSSLLLQASSKAGFNCDFRESQY*WPPLAD
Trigger: ATCAGCAAGTGGAGGCCATCAGTATTGACTTTCTCT...AAAATCACAATTAAATCCGGCCTTTGAAGATGCCTGGAGCAGCAGTGATGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
3UTR-3UTR TCA 90 bp CATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTGCAGTCTCGATAGTAGGAGACATTaGGCCCCAAAATGTTTAACA +
Preference number: 2 (lower is better)
Translates to: HQELVHIRMEPKPECCSLDSRRH*APKCLT
Trigger: TGTTAAACATTTTGGGGCTCAATGTCTCCTACTATC...GAGACTGCAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
3UTR-3UTR TCA 90 bp TGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGTTATCTGTTCTCCTaGGTAAACTGTATAAACAGC +
Preference number: 2 (lower is better)
Translates to: CYLYCSNEGFPRPQHLGSSYLFS*VNCINS
Trigger: GCTGTTTATACAGTTTACTCAGGAGAACAGATAACT...TGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR TCA 90 bp TCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTAAGGTTGCAGTGAGCTaGGATCAAAACACTGCACTC +
Preference number: 2 (lower is better)
Translates to: SFLKVETSRLIVQQVRESKVAVS*DQNTAL
Trigger: GAGTGCAGTGTTTTGATCTCAGCTCACTGCAACCTT...ACTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR-3UTR GCA 90 bp CAACTGCTACCAAACAGTGCTTGGTGGAGACTGGAGACATATGATGACTATAAACATCAGGATGATCTCTaGCAATGGAACACACTGCTT +
Preference number: 2 (lower is better)
Translates to: QLLPNSAWWRLETYDDYKHQDDL*QWNTLL
Trigger: AAGCAGTGTGTTCCATTGGCAGAGATCATCCTGATG...TTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
3UTR-3UTR CCA 90 bp TCATCACTGCTGCTCCAGGCATCTTCAAAGGCCGGATTTAATTGTGATTTTGTTCCAGGCCACAACATCTaGGATCAAGGAACACATTTT +
Preference number: 2 (lower is better)
Translates to: SSLLLQASSKAGFNCDFVPGHNI*DQGTHF
Trigger: AAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGG...AACAAAATCACAATTAAATCCGGCCTTTGAAGATGCCTGGAGCAGCAGTGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
3UTR-3UTR CCA 90 bp CATCATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTGCAGTGTGCTTGGTGGAGACTaGAGACATATGATGACTATA +
Preference number: 2 (lower is better)
Translates to: HHQELVHIRMEPKPECCSVLGGD*RHMMTI
Trigger: TATAGTCATCATATGTCTCCAGTCTCCACCAAGCAC...ACTGCAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR TCA 90 bp TCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTAGAGAAAGTCAATACTaGTGGCCTCCACTTGCTGAT +
Preference number: 2 (lower is better)
Translates to: SFLKVETSRLIVQQVRESRESQY*WPPLAD
Trigger: ATCAGCAAGTGGAGGCCATCAGTATTGACTTTCTCT...ACTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
ENST00000676185.1
3UTR-3UTR TCA 90 bp CATCATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTGCAGTGATAGTAGGAGACATTaGGCCCCAAAATGTTTAACA +
Preference number: 2 (lower is better)
Translates to: HHQELVHIRMEPKPECCSDSRRH*APKCLT
Trigger: TGTTAAACATTTTGGGGCTCAATGTCTCCTACTATC...ACTGCAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
3UTR-3UTR TCA 90 bp TGTCAGCACTTGCTGTTGCCAAGATATAGTCATAACGTGGAGACCAGGAAACTGCACATTTTATTTCCTTaGGCATCTTGGATAAGAAGC +
Preference number: 2 (lower is better)
Translates to: CQHLLLPRYSHNVETRKLHILFP*ASWIRS
Trigger: GCTTCTTATCCAAGATGCTCAAGGAAATAAAATGTG...CAGTTTCCTGGTCTCCACGTTATGACTATATCTTGGCAACAGCAAGTGCTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381118.7
3UTR-3UTR TCA 90 bp GCAAAATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGACCAACAGTGAGGAGGTaGAGTCCATCACTTGTAAAA +
Preference number: 2 (lower is better)
Translates to: AKSFLKVETSRLIVQQVRPTVRR*SPSLVK
Trigger: TTTTACAAGTGATGGACTTCACCTCCTCACTGTTGG...TCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGATTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR GCA 90 bp TCTAGTACCAACTGCTACCAAACAGTGCTTGGTGGAGACTGGAGACATATGATGGCCAATGGAACACACTaGTTTACATGTGTAATAAGA +
Preference number: 2 (lower is better)
Translates to: SSTNCYQTVLGGDWRHMMANGTH*FTCVIR
Trigger: TCTTATTACACATGTAAAGCAGTGTGTTCCATTGGC...CATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTGGTACTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
3UTR-3UTR GCA 90 bp TCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTATCCTTCTTCATCACTaGTGCTCCAGGCATCTTCAA +
Preference number: 2 (lower is better)
Translates to: SFLKVETSRLIVQQVRESILLHH*CSRHLQ
Trigger: TTGAAGATGCCTGGAGCAGCAGTGATGAAGAAGGAT...ACTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
3UTR-3UTR CCA 90 bp TCATCATCATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTGGTGCTTGGTGGAGACTaGAGACATATGATGACTATA +
Preference number: 2 (lower is better)
Translates to: SSSSGTGSYKDGTQARMLVLGGD*RHMMTI
Trigger: TATAGTCATCATATGTCTCCAGTCTCCACCAAGCAC...CAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATGATGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR CCA 90 bp TCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTCTACCAAACAGTGCTTaGTGGAGACTGGAGACATAT +
Preference number: 2 (lower is better)
Translates to: SFLKVETSRLIVQQVRESLPNSA*WRLETY
Trigger: ATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAG...ACTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR CCA 90 bp CCATATGGTACAAAAACAAATTCTGAACTGCAGCCACAGGAGACAGTGAATTTCCTACCAAACAGTGCTTaGTGGAGACTGGAGACATAT +
Preference number: 2 (lower is better)
Translates to: PYGTKTNSELQPQETVNFLPNSA*WRLETY
Trigger: ATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAG...GAAATTCACTGTCTCCTGTGGCTGCAGTTCAGAATTTGTTTTTGTACCATATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR TCA 90 bp ATAATCATTCTTGGCAAAATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTGCTGAAGGTCACAACTaGGGTACAACGACTTGTGTT +
Preference number: 2 (lower is better)
Translates to: IIILGKIILKGGNEQADSAEGHN*GTTTCV
Trigger: AACACAAGTCGTTGTACCTCAGTTGTGACCTTCAGC...ACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGATTTTGCCAAGAATGATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
ENST00000676185.1
3UTR-3UTR TCA 90 bp TCTTCATCACTGCTGCTCCAGGCATCTTCAAAGGCCGGATTTAATTGTGATTTTGATAGTAGGAGACATTaGGCCCCAAAATGTTTAACA +
Preference number: 2 (lower is better)
Translates to: SSSLLLQASSKAGFNCDFDSRRH*APKCLT
Trigger: TGTTAAACATTTTGGGGCTCAATGTCTCCTACTATC...AAAATCACAATTAAATCCGGCCTTTGAAGATGCCTGGAGCAGCAGTGATGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
3UTR-3UTR TCA 90 bp TCATCATCATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTGGATAGTAGGAGACATTaGGCCCCAAAATGTTTAACA +
Preference number: 2 (lower is better)
Translates to: SSSSGTGSYKDGTQARMLDSRRH*APKCLT
Trigger: TGTTAAACATTTTGGGGCTCAATGTCTCCTACTATC...CAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATGATGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
3UTR-3UTR TCA 90 bp TCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTAGTAATCAAACATCCTaGTGCTCTTCTCACATCCCA +
Preference number: 2 (lower is better)
Translates to: SFLKVETSRLIVQQVRESSNQTS*CSSHIP
Trigger: TGGGATGTGAGAAGAGCATCAGGATGTTTGATTACT...ACTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR GCA 90 bp ATAATCATTCTTGGCAAAATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTCTTCTTCATCACTGCTaGTCCAGGCATCTTCAAAGG +
Preference number: 2 (lower is better)
Translates to: IIILGKIILKGGNEQADSLLHHC*SRHLQR
Trigger: CCTTTGAAGATGCCTGGAGCAGCAGTGATGAAGAAG...ACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGATTTTGCCAAGAATGATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
3UTR-3UTR GCA 90 bp AACAGAAGAACTAGCACTATCCTGAGCCCTAGATTTAACCTTCCGATGTCCAGAGGGACATTCACAAAATaGAGTATGATGCAGTTAACA +
Preference number: 2 (lower is better)
Translates to: NRRTSTILSPRFNLPMSRGTFTK*SMMQLT
Trigger: TGTTAACTGCATCATACTGCATTTTGTGAATGTCCC...TCTGGACATCGGAAGGTTAAATCTAGGGCTCAGGATAGTGCTAGTTCTTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR-3UTR CCA 90 bp TCTAGTACCAACTGCTACCAAACAGTGCTTGGTGGAGACTGGAGACATATGATGTCTCTCTTGTCATTCTaGTTGAATGATTTCATTCTC +
Preference number: 2 (lower is better)
Translates to: SSTNCYQTVLGGDWRHMMSLLSF*LNDFIL
Trigger: GAGAATGAAATCATTCAACCAGAATGACAAGAGAGA...CATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTGGTACTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
3UTR-3UTR CCA 90 bp AACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATAATAAGATTGTCTGCTaGAGTTCTCAAGGTCATAAA +
Preference number: 2 (lower is better)
Translates to: NDLCYLYCSNEGFPRPQHNKIVC*SSQGHK
Trigger: TTTATGACCTTGAGAACTCCAGCAGACAATCTTATT...ATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
3UTR-3UTR CCA 90 bp TTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTCAATACGATGATCTCTGCCAATaGAACACACTGCTTTACATG +
Preference number: 2 (lower is better)
Translates to: LKVETSRLIVQQVRESQYDDLCQ*NTLLYM
Trigger: CATGTAAAGCAGTGTGTTCCATTGGCAGAGATCATC...GTATTGACTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
3UTR-3UTR CCA 90 bp GATTTTGTTGTAGTCTCATCATCATCAGGAACTGGTTCATATAAGGATGGAACCCCAAACAGTGCTTGGTaGAGACTGGAGACATATGAT +
Preference number: 2 (lower is better)
Translates to: DFVVVSSSSGTGSYKDGTPNSAW*RLETYD
Trigger: ATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGG...GGTTCCATCCTTATATGAACCAGTTCCTGATGATGATGAGACTACAACAAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR CAA 90 bp ATGATCTCTGCCAATGGAACACACTGCTTTACATGTGTAATAAGATaGTCTGCTGGAGTTCTCAAGGTCATAAAGTACAATCACACCATC +
Preference number: 2 (lower is better)
Translates to: MISANGTHCFTCVIR*SAGVLKVIKYNHTI
Trigger: GATGGTGTGATTGTACTTTATGACCTTGAGAACTCCAGCAGACAATCTTATTACACATGTAAAGCAGTGTGTTCCATTGGCAGAGATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
3UTR-3UTR TCA 90 bp ATAATCATTCTTGGCAAAATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTAGAGAAAGTCAATACTaGTGGCCTCCACTTGCTGAT +
Preference number: 2 (lower is better)
Translates to: IIILGKIILKGGNEQADSRESQY*WPPLAD
Trigger: ATCAGCAAGTGGAGGCCATCAGTATTGACTTTCTCT...ACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGATTTTGCCAAGAATGATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
ENST00000676185.1
3UTR-3UTR TCA 90 bp TCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTGTTAAAAGCCTCCTGTaGTGCACATTTTGGATAGTA +
Preference number: 2 (lower is better)
Translates to: SFLKVETSRLIVQQVRESVKSLL*CTFWIV
Trigger: TACTATCCAAAATGTGCATCACAGGAGGCTTTTAAC...ACTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
ENST00000676185.1
3UTR-3UTR GCA 90 bp GTGTGTTTTCTCCATTGGAACTATTCCAGAGCCTCATTCGATTATCTGTACCAACGTCAATCCTTAAGTTaGTGTCTCTCTTGTCATTCT +
Preference number: 2 (lower is better)
Translates to: VCFLHWNYSRASFDYLYQRQSLS*CLSCHS
Trigger: AGAATGACAAGAGAGACAGCAACTTAAGGATTGACG...TTGGTACAGATAATCGAATGAGGCTCTGGAATAGTTCCAATGGAGAAAACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
3UTR-3UTR GCA 90 bp GCAAAATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGACGTCAATCCTTAAGTTaGTGTCTCTCTTGTCATTCT +
Preference number: 2 (lower is better)
Translates to: AKSFLKVETSRLIVQQVRRQSLS*CLSCHS
Trigger: AGAATGACAAGAGAGACAGCAACTTAAGGATTGACG...TCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGATTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
3UTR-3UTR GCA 90 bp GATTTTGTTGTAGTCTCATCATCATCAGGAACTGGTTCATATAAGGATGGAACCGTCAGCACTTGCTGTTaGCAAGATATAGTCATAACG +
Preference number: 2 (lower is better)
Translates to: DFVVVSSSSGTGSYKDGTVSTCC*QDIVIT
Trigger: CGTTATGACTATATCTTGGCAACAGCAAGTGCTGAC...GGTTCCATCCTTATATGAACCAGTTCCTGATGATGATGAGACTACAACAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR GCA 90 bp ATCAAACATCCTGATGCTCTTCTCACATCCCATAATTTTACTCTACTGTCAGCAGCTCTCCTCTTATCTTaGTGTTGCCAAGATATAGTC +
Preference number: 2 (lower is better)
Translates to: IKHPDALLTSHNFTLLSAALLLS*CCQDIV
Trigger: GACTATATCTTGGCAACAGCAAGATAAGAGGAGAGC...TGCTGACAGTAGAGTAAAATTATGGGATGTGAGAAGAGCATCAGGATGTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647486.1
3UTR-3UTR CCA 90 bp AAGTCACAAAGTTGTACTTTGGGTCCTCTAGTACCAACTGCTACCAAACAGTGCAATAAGATTGTCTGCTaGAGTTCTCAAGGTCATAAA +
Preference number: 2 (lower is better)
Translates to: KSQSCTLGPLVPTATKQCNKIVC*SSQGHK
Trigger: TTTATGACCTTGAGAACTCCAGCAGACAATCTTATT...GCACTGTTTGGTAGCAGTTGGTACTAGAGGACCCAAAGTACAACTTTGTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
3UTR-3UTR CCA 90 bp AGTGCTTGGTGGAGACTGGAGACATATGATGACTATAAACTGTTTCCTCAAAATGATGATCTCTGCCAATaGAACACACTGCTTTACATG +
Preference number: 2 (lower is better)
Translates to: SAWWRLETYDDYKLFPQNDDLCQ*NTLLYM
Trigger: CATGTAAAGCAGTGTGTTCCATTGGCAGAGATCATC...ATTTTGAGGAAACAGTTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
3UTR-3UTR TCA 90 bp ATAATCATTCTTGGCAAAATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTGTTCATAAAATCTGCTaGAGGTCACAACTGAGGTAC +
Preference number: 2 (lower is better)
Translates to: IIILGKIILKGGNEQADSVHKIC*RSQLRY
Trigger: GTACCTCAGTTGTGACCTTCAGCAGATTTTATGAAC...ACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGATTTTGCCAAGAATGATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
ENST00000676185.1
3UTR-3UTR TCA 90 bp GATTTTGTTGTAGTCTCATCATCATCAGGAACTGGTTCATATAAGGATGGAACCGATAGTAGGAGACATTaGGCCCCAAAATGTTTAACA +
Preference number: 2 (lower is better)
Translates to: DFVVVSSSSGTGSYKDGTDSRRH*APKCLT
Trigger: TGTTAAACATTTTGGGGCTCAATGTCTCCTACTATC...GGTTCCATCCTTATATGAACCAGTTCCTGATGATGATGAGACTACAACAAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
3UTR-3UTR TCA 90 bp GCAAAATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGATTAACTTTCCCATTATaGGCAGTGTTTGCTGATTCA +
Preference number: 2 (lower is better)
Translates to: AKSFLKVETSRLIVQQVRLTFPL*AVFADS
Trigger: TGAATCAGCAAACACTGCTCATAATGGGAAAGTTAA...TCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGATTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR GCA 90 bp TTTTCTCCATTGGAACTATTCCAGAGCCTCATTCGATTATCTGTACCAACAGTGCTCTTATCTTGCTGTTaGCAAGATATAGTCATAACG +
Preference number: 2 (lower is better)
Translates to: FSPLELFQSLIRLSVPTVLLSCC*QDIVIT
Trigger: CGTTATGACTATATCTTGGCAACAGCAAGATAAGAG...CACTGTTGGTACAGATAATCGAATGAGGCTCTGGAATAGTTCCAATGGAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647486.1
3UTR-3UTR CCA 90 bp ATTTGGTCATACCTTAATGAGTTTCACAGAAAAAGAGTTCAAGCATTAGCGCAACCAGGCCACAACATCTaGGATCAAGGAACACATTTT +
Preference number: 2 (lower is better)
Translates to: IWSYLNEFHRKRVQALAQPGHNI*DQGTHF
Trigger: AAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGG...TTGCGCTAATGCTTGAACTCTTTTTCTGTGAAACTCATTAAGGTATGACCAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
ENST00000676185.1
3UTR-3UTR TCA 90 bp ATTTGGTCATACCTTAATGAGTTTCACAGAAAAAGAGTTCAAGCATTAGCGCAAGTTCATAAAATCTGCTaGAGGTCACAACTGAGGTAC +
Preference number: 2 (lower is better)
Translates to: IWSYLNEFHRKRVQALAQVHKIC*RSQLRY
Trigger: GTACCTCAGTTGTGACCTTCAGCAGATTTTATGAAC...TTGCGCTAATGCTTGAACTCTTTTTCTGTGAAACTCATTAAGGTATGACCAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
ENST00000676185.1
3UTR CAA 90 bp CAAAAGTCTCCCCTAATTATCACAGTCAGGCCTGAATTAGTAACCTaGAATATCAAACACAAACTCTCAAAGTATAGGACAGAAACAACA +
Preference number: 2 (lower is better)
Translates to: QKSPLIITVRPELVT*NIKHKLSKYRTETT
Trigger: TGTTGTTTCTGTCCTATACTTTGAGAGTTTGTGTTTGATATTCAAGGTTACTAATTCAGGCCTGACTGTGATAATTAGGGGAGACTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR-3UTR TCA 90 bp ATTTGGTCATACCTTAATGAGTTTCACAGAAAAAGAGTTCAAGCATTAGCGCAAGATAGTAGGAGACATTaGGCCCCAAAATGTTTAACA +
Preference number: 2 (lower is better)
Translates to: IWSYLNEFHRKRVQALAQDSRRH*APKCLT
Trigger: TGTTAAACATTTTGGGGCTCAATGTCTCCTACTATC...TTGCGCTAATGCTTGAACTCTTTTTCTGTGAAACTCATTAAGGTATGACCAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
ENST00000676185.1
3UTR-3UTR TCA 90 bp AGAGTAATCAAACATCCTGATGCTCTTCTCACATCCCATAATTTTACTCTACTGGTCATTCTGGTTGAATaGTTTCATTCTCTGGTTGAT +
Preference number: 2 (lower is better)
Translates to: RVIKHPDALLTSHNFTLLVILVE*FHSLVD
Trigger: ATCAACCAGAGAATGAAATCATTCAACCAGAATGAC...CAGTAGAGTAAAATTATGGGATGTGAGAAGAGCATCAGGATGTTTGATTACTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
3UTR-3UTR GCA 90 bp ATAATCATTCTTGGCAAAATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTTGTAATAAGATTGTCTaGTGGAGTTCTCAAGGTCAT +
Preference number: 2 (lower is better)
Translates to: IIILGKIILKGGNEQADSCNKIV*WSSQGH
Trigger: ATGACCTTGAGAACTCCAGCAGACAATCTTATTACA...ACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGATTTTGCCAAGAATGATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
3UTR-3UTR CCA 90 bp TTGCTGTTGCCAAGATATAGTCATAACGTGGAGACCAGGAAACTGCTAATATTTTCTCTCTTGTCATTCTaGTTGAATGATTTCATTCTC +
Preference number: 2 (lower is better)
Translates to: LLLPRYSHNVETRKLLIFSLLSF*LNDFIL
Trigger: GAGAATGAAATCATTCAACCAGAATGACAAGAGAGA...AAATATTAGCAGTTTCCTGGTCTCCACGTTATGACTATATCTTGGCAACAGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
3UTR GCA 72 bp ACTGGCTTGTGCCAGTCACCTGAGCCAATAAATTGTTaGCTTAAAGAGCTGACTACAGGCTGGCCGCGGTGG +
Preference number: 3 (lower is better)
Translates to: TGLCQSPEPINC*LKELTTGWPRW
Trigger: CCACCGCGGCCAGCCTGTAGTCAGCTCTTTAAGGCAACAATTTATTGGCTCAGGTGACTGGCACAAGCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR-3UTR CAA 90 bp GTGGCAGCAGGGGTAAGGACTGGGGAATGTGGTACTAATGTGGAAAGAGAGGGGCAGGAGCTAGGGTTGTaGGAGAAACATTGGTCAAAG +
Preference number: 3 (lower is better)
Translates to: VAAGVRTGECGTNVEREGQELGL*EKHWSK
Trigger: CTTTGACCAATGTTTCTCCAACAACCCTAGCTCCTG...CCCCTCTCTTTCCACATTAGTACCACATTCCCCAGTCCTTACCCCTGCTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR-3UTR CAA 90 bp GCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTGACAACGACTTGTGTTACTaGTACTGTAGCAATGAGGGC +
Preference number: 3 (lower is better)
Translates to: AMRAFPGHNIWDQGTHFDNDLCY*YCSNEG
Trigger: GCCCTCATTGCTACAGTACAAGTAACACAAGTCGTT...GTCAAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
ENST00000676185.1
3UTR-3UTR CAA 90 bp TGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACTCTACTGTCAGCACTaGCTGTTGCCAAGATATAGT +
Preference number: 3 (lower is better)
Translates to: CTVAMRAFPGHNIWDQGTLYCQH*LLPRYS
Trigger: ACTATATCTTGGCAACAGCAAGTGCTGACAGTAGAG...TGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR CAA 90 bp AACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATACCCAAGCCAGAATGTaGCAGTCTCTGCTACCACTA +
Preference number: 3 (lower is better)
Translates to: NDLCYLYCSNEGFPRPQHTQARM*QSLLPL
Trigger: TAGTGGTAGCAGAGACTGCAACATTCTGGCTTGGGT...ATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
3UTR-3UTR CAA 90 bp TGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACATGTCAGCACTTGCTGTaGCCAAGATATAGTCATAAC +
Preference number: 3 (lower is better)
Translates to: CTVAMRAFPGHNIWDQGTCQHLL*PRYSHN
Trigger: GTTATGACTATATCTTGGCAACAGCAAGTGCTGACA...TGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR CAA 90 bp AGGTACAACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACTCTACTGTCAGCACTaGCTGTTGCCAAGATATAGT +
Preference number: 3 (lower is better)
Translates to: RYNDLCYLYCSNEGFPRPLYCQH*LLPRYS
Trigger: ACTATATCTTGGCAACAGCAAGTGCTGACAGTAGAG...TGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTTGTACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR CAA 90 bp GCAAAATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAAGGCGGGTGGATCATTaGAGGTCAGCAGTTCGCAAC +
Preference number: 3 (lower is better)
Translates to: AKSFLKVETSRLIVQQVRRRVDH*RSAVRN
Trigger: GTTGCGAACTGCTGACCTCAAATGATCCACCCGCCT...TCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGATTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR-3UTR CAA 90 bp TCTTCATCACTGCTGCTCCAGGCATCTTCAAAGGCCGGATTTAATTGTGATTTTGCTACCAAACAGTGCTaGGTGGAGACTGGAGACATA +
Preference number: 3 (lower is better)
Translates to: SSSLLLQASSKAGFNCDFATKQC*VETGDI
Trigger: TATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGC...AAAATCACAATTAAATCCGGCCTTTGAAGATGCCTGGAGCAGCAGTGATGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR TCA 72 bp AGGCTGATAGTACAGCAAGTAAGAGAAAGTCAATACTaGTGGCCTCCACTTGCTGATCCTCTGAGACTGCAT +
Preference number: 3 (lower is better)
Translates to: RLIVQQVRESQY*WPPLADPLRLH
Trigger: ATGCAGTCTCAGAGGATCAGCAAGTGGAGGCCATCAGTATTGACTTTCTCTTACTTGCTGTACTATCAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
ENST00000676185.1
3UTR CCA 72 bp AGTATCTTCATGAGGAGTGGTCAGTCAAGAGGACATTaGGCACCTGAAAAGTCCTACACACAGAGAACTAAG +
Preference number: 3 (lower is better)
Translates to: SIFMRSGQSRGH*APEKSYTQRTK
Trigger: CTTAGTTCTCTGTGTGTAGGACTTTTCAGGTGCCCAATGTCCTCTTGACTGACCACTCCTCATGAAGATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR-3UTR CAA 90 bp GAATGTGAGAACAGGATCCAGACTTCAAGTCACAAAGTTGTACTTTGGGTCCTCAACGACTTGTGTTACTaGTACTGTAGCAATGAGGGC +
Preference number: 3 (lower is better)
Translates to: ECENRIQTSSHKVVLWVLNDLCY*YCSNEG
Trigger: GCCCTCATTGCTACAGTACAAGTAACACAAGTCGTT...GAGGACCCAAAGTACAACTTTGTGACTTGAAGTCTGGATCCTGTTCTCACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR CAA 90 bp CTTCATCACTGCTGCTCCAGGCATCTTCAAAGGCCGGATTTAATTGTGATTTTGCTGAGGTACAACGACTaGTGTTACTTGTACTGTAGC +
Preference number: 3 (lower is better)
Translates to: LHHCCSRHLQRPDLIVILLRYND*CYLYCS
Trigger: GCTACAGTACAAGTAACACAAGTCGTTGTACCTCAG...CAAAATCACAATTAAATCCGGCCTTTGAAGATGCCTGGAGCAGCAGTGATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
3UTR-3UTR CAA 90 bp GTGTGTTTTCTCCATTGGAACTATTCCAGAGCCTCATTCGATTATCTGTACCAAGCTACCAAACAGTGCTaGGTGGAGACTGGAGACATA +
Preference number: 3 (lower is better)
Translates to: VCFLHWNYSRASFDYLYQATKQC*VETGDI
Trigger: TATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGC...TTGGTACAGATAATCGAATGAGGCTCTGGAATAGTTCCAATGGAGAAAACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR CAA 90 bp AACAGAAGAACTAGCACTATCCTGAGCCCTAGATTTAACCTTCCGATGTCCAGACTAATTGTGCTAGGCTaGCCATTCCATTTCTGGCAT +
Preference number: 3 (lower is better)
Translates to: NRRTSTILSPRFNLPMSRLIVLG*PFHFWH
Trigger: ATGCCAGAAATGGAATGGCAAGCCTAGCACAATTAG...TCTGGACATCGGAAGGTTAAATCTAGGGCTCAGGATAGTGCTAGTTCTTCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR-3UTR CAA 90 bp TGTCAGCACTTGCTGTTGCCAAGATATAGTCATAACGTGGAGACCAGGAAACTGAAGTTGCTGTCTCTCTaGTCATTCTGGTTGAATGAT +
Preference number: 3 (lower is better)
Translates to: CQHLLLPRYSHNVETRKLKLLSL*SFWLND
Trigger: ATCATTCAACCAGAATGACAAGAGAGACAGCAACTT...CAGTTTCCTGGTCTCCACGTTATGACTATATCTTGGCAACAGCAAGTGCTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
3UTR-3UTR CAA 90 bp TCATCATCATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTGGCGTCAATCCTTAAGTaGCTGTCTCTCTTGTCATTC +
Preference number: 3 (lower is better)
Translates to: SSSSGTGSYKDGTQARMLASILK*LSLLSF
Trigger: GAATGACAAGAGAGACAGCAACTTAAGGATTGACGC...CAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATGATGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
3UTR-3UTR CAA 90 bp ATTCCAGAGCCTCATTCGATTATCTGTACCAACAGTGAGGAGGTGAAGTCCATCACATGTGTAATAAGATaGTCTGCTGGAGTTCTCAAG +
Preference number: 3 (lower is better)
Translates to: IPEPHSIICTNSEEVKSITCVIR*SAGVLK
Trigger: CTTGAGAACTCCAGCAGACAATCTTATTACACATGT...GATGGACTTCACCTCCTCACTGTTGGTACAGATAATCGAATGAGGCTCTGGAAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
3UTR-3UTR CAA 90 bp GATTTTGTTGTAGTCTCATCATCATCAGGAACTGGTTCATATAAGGATGGAACCGCTACCAAACAGTGCTaGGTGGAGACTGGAGACATA +
Preference number: 3 (lower is better)
Translates to: DFVVVSSSSGTGSYKDGTATKQC*VETGDI
Trigger: TATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGC...GGTTCCATCCTTATATGAACCAGTTCCTGATGATGATGAGACTACAACAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR TCA 72 bp TTATCAAATGAGCTTGATGTGAACATGCCAGTGTCATaGGGATACCACTGTACAGTCTCCACACTGTATCTG +
Preference number: 3 (lower is better)
Translates to: LSNELDVNMPVS*GYHCTVSTLYL
Trigger: CAGATACAGTGTGGAGACTGTACAGTGGTATCCTCATGACACTGGCATGTTCACATCAAGCTCATTTGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
3UTR GCA 72 bp CTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTaGAGTCTCTGCTACCACTATAAAGTTCCTGGAAAT +
Preference number: 3 (lower is better)
Translates to: LVHIRMEPKPEC*SLCYHYKVPGN
Trigger: ATTTCCAGGAACTTTATAGTGGTAGCAGAGACTGCAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR CCA 72 bp TTGCAATATGAAAGAACACAGTCTAGGTTAATAACTTaGTTTGTGGCAGCAGGGGTAAGGACTGGGGAATGT +
Preference number: 3 (lower is better)
Translates to: LQYERTQSRLIT*FVAAGVRTGEC
Trigger: ACATTCCCCAGTCCTTACCCCTGCTGCCACAAACCAAGTTATTAACCTAGACTGTGTTCTTTCATATTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR-3UTR CAA 90 bp ATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGAACGACTTGTGTTACTaGTACTGTAGCAATGAGGGC +
Preference number: 3 (lower is better)
Translates to: IILKGGNEQADSTASKRKNDLCY*YCSNEG
Trigger: GCCCTCATTGCTACAGTACAAGTAACACAAGTCGTT...CTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
ENST00000676185.1
3UTR-3UTR CAA 90 bp ATTGGAACTATTCCAGAGCCTCATTCGATTATCTGTACCAACAGTGAGGAGGTGAAGTTGCTGTCTCTCTaGTCATTCTGGTTGAATGAT +
Preference number: 3 (lower is better)
Translates to: IGTIPEPHSIICTNSEEVKLLSL*SFWLND
Trigger: ATCATTCAACCAGAATGACAAGAGAGACAGCAACTT...CACCTCCTCACTGTTGGTACAGATAATCGAATGAGGCTCTGGAATAGTTCCAAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
3UTR-3UTR CAA 90 bp CTTCATCACTGCTGCTCCAGGCATCTTCAAAGGCCGGATTTAATTGTGATTTTGACATGTGTAATAAGATaGTCTGCTGGAGTTCTCAAG +
Preference number: 3 (lower is better)
Translates to: LHHCCSRHLQRPDLIVILTCVIR*SAGVLK
Trigger: CTTGAGAACTCCAGCAGACAATCTTATTACACATGT...CAAAATCACAATTAAATCCGGCCTTTGAAGATGCCTGGAGCAGCAGTGATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
3UTR-3UTR CAA 90 bp TCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTATAATCACGTGTGGGTaGACACAGACGGAGACAATA +
Preference number: 3 (lower is better)
Translates to: SFLKVETSRLIVQQVRESIITCG*TQTETI
Trigger: TATTGTCTCCGTCTGTGTCAACCCACACGTGATTAT...ACTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR GCA 72 bp GTGAACATCAGGATGATCTCTGCCAATGGAACACACTaGTTTACATGTGTAATAAGATTGTCTGCTGGAGTT +
Preference number: 3 (lower is better)
Translates to: VNIRMISANGTH*FTCVIRLSAGV
Trigger: AACTCCAGCAGACAATCTTATTACACATGTAAAGCAGTGTGTTCCATTGGCAGAGATCATCCTGATGTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
3UTR GCA 72 bp GTACTAAAGATGATATTCATCCTTCTTCATCACTGCTaGTCCAGGCATCTTCAAAGGCCGGATTTAATTGTG +
Preference number: 3 (lower is better)
Translates to: VLKMIFILLHHC*SRHLQRPDLIV
Trigger: CACAATTAAATCCGGCCTTTGAAGATGCCTGGAGCAGCAGTGATGAAGAAGGATGAATATCATCTTTAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000675378.1
3UTR GCA 72 bp CTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTaGAGTCTCTGCTACCACTATAAAGTTCCTACAAAA +
Preference number: 3 (lower is better)
Translates to: LVHIRMEPKPEC*SLCYHYKVPTK
Trigger: TTTTGTAGGAACTTTATAGTGGTAGCAGAGACTGCAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675378.1
3UTR CCA 72 bp AGTACCAACTGCTACCAAACAGTGCTTGGTGGAGACTaGAGACATATGATGACTATAAACTGTTTCCTCAAA +
Preference number: 3 (lower is better)
Translates to: STNCYQTVLGGD*RHMMTINCFLK
Trigger: TTTGAGGAAACAGTTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTGGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR CAA 90 bp TCTGTTCTCCTGAGTAAACTGTATAAACAGCAATGGTGCTACCATATGGTACAAAACGACTTGTGTTACTaGTACTGTAGCAATGAGGGC +
Preference number: 3 (lower is better)
Translates to: SVLLSKLYKQQWCYHMVQNDLCY*YCSNEG
Trigger: GCCCTCATTGCTACAGTACAAGTAACACAAGTCGTT...TTGTACCATATGGTAGCACCATTGCTGTTTATACAGTTTACTCAGGAGAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR CAA 90 bp CAACTGCTACCAAACAGTGCTTGGTGGAGACTGGAGACATATGATGACTATAAAACATGTGTAATAAGATaGTCTGCTGGAGTTCTCAAG +
Preference number: 3 (lower is better)
Translates to: QLLPNSAWWRLETYDDYKTCVIR*SAGVLK
Trigger: CTTGAGAACTCCAGCAGACAATCTTATTACACATGT...TTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
3UTR-3UTR CAA 90 bp GTGTGTTTTCTCCATTGGAACTATTCCAGAGCCTCATTCGATTATCTGTACCAACTTCAAGTCACAAAGTaGTACTTTGGGTCCTCTAGT +
Preference number: 3 (lower is better)
Translates to: VCFLHWNYSRASFDYLYQLQVTK*YFGSSS
Trigger: ACTAGAGGACCCAAAGTACAACTTTGTGACTTGAAG...TTGGTACAGATAATCGAATGAGGCTCTGGAATAGTTCCAATGGAGAAAACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR CAA 90 bp ATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGCTTCAAGTCACAAAGTaGTACTTTGGGTCCTCTAGT +
Preference number: 3 (lower is better)
Translates to: IILKGGNEQADSTASKRKLQVTK*YFGSSS
Trigger: ACTAGAGGACCCAAAGTACAACTTTGTGACTTGAAG...CTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR CAA 90 bp AACAGAAGAACTAGCACTATCCTGAGCCCTAGATTTAACCTTCCGATGTCCAGAAAAACCAAAGTGGCTTaGGAATTCTCAACTGCAATA +
Preference number: 3 (lower is better)
Translates to: NRRTSTILSPRFNLPMSRKTKVA*EFSTAI
Trigger: TATTGCAGTTGAGAATTCCAAAGCCACTTTGGTTTT...TCTGGACATCGGAAGGTTAAATCTAGGGCTCAGGATAGTGCTAGTTCTTCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR-3UTR CAA 90 bp GTGTGTTTTCTCCATTGGAACTATTCCAGAGCCTCATTCGATTATCTGTACCAACTCTTGTCATTCTGGTaGAATGATTTCATTCTCTGG +
Preference number: 3 (lower is better)
Translates to: VCFLHWNYSRASFDYLYQLLSFW*NDFILW
Trigger: CCAGAGAATGAAATCATTCAACCAGAATGACAAGAG...TTGGTACAGATAATCGAATGAGGCTCTGGAATAGTTCCAATGGAGAAAACACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
3UTR-3UTR CAA 90 bp TTGCCAAGATATAGTCATAACGTGGAGACCAGGAAACTGCTAATATTTCTTGTCCTTCAAGTCACAAAGTaGTACTTTGGGTCCTCTAGT +
Preference number: 3 (lower is better)
Translates to: LPRYSHNVETRKLLIFLVLQVTK*YFGSSS
Trigger: ACTAGAGGACCCAAAGTACAACTTTGTGACTTGAAG...GACAAGAAATATTAGCAGTTTCCTGGTCTCCACGTTATGACTATATCTTGGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR CAA 90 bp GATTTTGTTGTAGTCTCATCATCATCAGGAACTGGTTCATATAAGGATGGAACCCTTCAAGTCACAAAGTaGTACTTTGGGTCCTCTAGT +
Preference number: 3 (lower is better)
Translates to: DFVVVSSSSGTGSYKDGTLQVTK*YFGSSS
Trigger: ACTAGAGGACCCAAAGTACAACTTTGTGACTTGAAG...GGTTCCATCCTTATATGAACCAGTTCCTGATGATGATGAGACTACAACAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR CAA 90 bp GATTTTGTTGTAGTCTCATCATCATCAGGAACTGGTTCATATAAGGATGGAACCCATTATGAGCAGTGTTaGCTGATTCAACAGCTTGTG +
Preference number: 3 (lower is better)
Translates to: DFVVVSSSSGTGSYKDGTHYEQC*LIQQLV
Trigger: CACAAGCTGTTGAATCAGCAAACACTGCTCATAATG...GGTTCCATCCTTATATGAACCAGTTCCTGATGATGATGAGACTACAACAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
3UTR-3UTR CAA 90 bp TCTGTTCTCCTGAGTAAACTGTATAAACAGCAATGGTGCTACCATATGGTACAAAGCTCTCCTCTTATCTaGCTGTTGCCAAGATATAGT +
Preference number: 3 (lower is better)
Translates to: SVLLSKLYKQQWCYHMVQSSPLI*LLPRYS
Trigger: ACTATATCTTGGCAACAGCAAGATAAGAGGAGAGCT...TTGTACCATATGGTAGCACCATTGCTGTTTATACAGTTTACTCAGGAGAACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647486.1
3UTR TCA 72 bp AGCCTCATTCGATTATCTGTACCAACAGTGAGGAGGTaGAGTCCATCACTTGTAAAACATAAGCCATTAACT +
Preference number: 3 (lower is better)
Translates to: SLIRLSVPTVRR*SPSLVKHKPLT
Trigger: AGTTAATGGCTTATGTTTTACAAGTGATGGACTTCACCTCCTCACTGTTGGTACAGATAATCGAATGAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000647486.1
3UTR GCA 72 bp AGTATGTCAAAGAGATATCTGCACTACCAGGTTCACTaGAGCATTATTCACAATAGCCAGGATATGGTATCA +
Preference number: 3 (lower is better)
Translates to: SMSKRYLHYQVH*SIIHNSQDMVS
Trigger: TGATACCATATCCTGGCTATTGTGAATAATGCTGCAGTGAACCTGGTAGTGCAGATATCTCTTTGACATACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR CCA 72 bp GCGTCAATCCTTAAGTTGCTGTCTCTCTTGTCATTCTaGTTGAATGATTTCATTCTCTGGTTGATTCCTAAG +
Preference number: 3 (lower is better)
Translates to: ASILKLLSLLSF*LNDFILWLIPK
Trigger: CTTAGGAATCAACCAGAGAATGAAATCATTCAACCAGAATGACAAGAGAGACAGCAACTTAAGGATTGACGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381118.7
3UTR-3UTR CAA 90 bp AGTGCTTGGTGGAGACTGGAGACATATGATGACTATAAACTGTTTCCTCAAAATCTCTTGTCATTCTGGTaGAATGATTTCATTCTCTGG +
Preference number: 3 (lower is better)
Translates to: SAWWRLETYDDYKLFPQNLLSFW*NDFILW
Trigger: CCAGAGAATGAAATCATTCAACCAGAATGACAAGAG...ATTTTGAGGAAACAGTTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
3UTR-3UTR CAA 90 bp AGATATAGTCATAACGTGGAGACCAGGAAACTGCTAATATTTCTTGTCTGTGACCCTCTTATCTTGCTGTaGCCAAGATATAGTCATAAC +
Preference number: 3 (lower is better)
Translates to: RYSHNVETRKLLIFLVCDPLILL*PRYSHN
Trigger: GTTATGACTATATCTTGGCAACAGCAAGATAAGAGG...GTCACAGACAAGAAATATTAGCAGTTTCCTGGTCTCCACGTTATGACTATATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647486.1
3UTR TCA 72 bp GCTGATTCAACAGCTTGTGACTTTTTCCCATTATGTTaGTCAAGAGTAATCAAACATCCTGATGCTCTTCTC +
Preference number: 3 (lower is better)
Translates to: ADSTACDFFPLC*SRVIKHPDALL
Trigger: GAGAAGAGCATCAGGATGTTTGATTACTCTTGATCAACATAATGGGAAAAAGTCACAAGCTGTTGAATCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000647486.1
3UTR GCA 72 bp CCAAAGGATATGAAATCAGTATGTCAAAGAGATATCTaGACTACCAGGTTCACTGCAGCATTATTCACAATA +
Preference number: 3 (lower is better)
Translates to: PKDMKSVCQRDI*TTRFTAALFTI
Trigger: TATTGTGAATAATGCTGCAGTGAACCTGGTAGTGCAGATATCTCTTTGACATACTGATTTCATATCCTTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR CCA 72 bp TCTCTCTTGTCATTCTGGTTGAATGATTTCATTCTCTaGTTGATTCCTAAGGAATGGCTAATGAGAACAACA +
Preference number: 3 (lower is better)
Translates to: SLLSFWLNDFIL*LIPKEWLMRTT
Trigger: TGTTGTTCTCATTAGCCATTCCTTAGGAATCAACCAGAGAATGAAATCATTCAACCAGAATGACAAGAGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381118.7
3UTR TCA 72 bp GATGTAAAGTGTTCTTACCACAAAATGGTAACCATGTaGGGCATATGTCAGTTAGCTAGATTTAGTCATTCT +
Preference number: 3 (lower is better)
Translates to: DVKCSYHKMVTM*GICQLARFSHS
Trigger: AGAATGACTAAATCTAGCTAACTGACATATGCCTCACATGGTTACCATTTTGTGGTAAGAACACTTTACATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR GCA 72 bp TGTACAAGGCACTGGAGAGAAGTTATACATGATCGCTaGCTTCATAATAGATTCATTGATATACAATGTGAA +
Preference number: 3 (lower is better)
Translates to: CTRHWREVIHDR*LHNRFIDIQCE
Trigger: TTCACATTGTATATCAATGAATCTATTATGAAGGCAGCGATCATGTATAACTTCTCTCCAGTGCCTTGTACA
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR CCA 72 bp TTGAATGATTTCATTCTCTGGTTGATTCCTAAGGAATaGCTAATGAGAACAACAGTCTCTGAATTCTTGTGT +
Preference number: 3 (lower is better)
Translates to: LNDFILWLIPKE*LMRTTVSEFLC
Trigger: ACACAAGAATTCAGAGACTGTTGTTCTCATTAGCCATTCCTTAGGAATCAACCAGAGAATGAAATCATTCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381118.7
3UTR TCA 72 bp TTTATAATGTCCCTTAAGCATAGTTATCTGTTCTCCTaGGTAAACTGTATAAACAGCAATGGTGCTACCATA +
Preference number: 3 (lower is better)
Translates to: FIMSLKHSYLFS*VNCINSNGATI
Trigger: TATGGTAGCACCATTGCTGTTTATACAGTTTACTCAGGAGAACAGATAACTATGCTTAAGGGACATTATAAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
ENST00000647486.1
CDS-3UTR TCA 90 bp GGTACAACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACCACTGGACGTCGCCATaGCAGAGCTCAGGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: GTTTCVTCTVAMRAFPGHHWTSP*QSSGAG
Trigger: TCCCGCCCCTGAGCTCTGTCATGGCGACGTCCAGTG...GTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTTGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp GTGGCAGCAGGGGTAAGGACTGGGGAATGTGGTACTAATGTGGAAAGAGAGGGGCCATTCTCCTGCCTCTaGTGCCCAAAGTGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: VAAGVRTGECGTNVEREGPFSCL*CPKCWV
Trigger: AACCCAGCACTTTGGGCATCAGAGGCAGGAGAATGG...CCCCTCTCTTTCCACATTAGTACCACATTCCCCAGTCCTTACCCCTGCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR TCA 90 bp GTGGCAGCAGGGGTAAGGACTGGGGAATGTGGTACTAATGTGGAAAGAGAGGGGGGCAGGAGAATTGCTTaGACCTGGGAGGTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: VAAGVRTGECGTNVEREGGRRIA*TWEVKV
Trigger: AACCTTCACCTCCCAGGTTCAAGCAATTCTCCTGCC...CCCCTCTCTTTCCACATTAGTACCACATTCCCCAGTCCTTACCCCTGCTGCCAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR TCA 90 bp TACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACAAAGCGGAGGTTGCAGTaGGCTGAGATGGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: YCSNEGFPRPQHLGSRNTKRRLQ*AEMAPL
Trigger: CAGTGGCGCCATCTCAGCTCACTGCAACCTCCGCTT...TGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR CCA 90 bp TACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATGTCCTCACACCGGCTaGAGCACTGGACGTCGCCAT +
Preference number: 4 (lower is better)
Translates to: YCSNEGFPRPQHLGSRNTCPHTG*STGRRH
Trigger: ATGGCGACGTCCAGTGCTCCAGCCGGTGTGAGGACA...TGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CCA 90 bp GGTCCTCTAGTACCAACTGCTACCAAACAGTGCTTGGTGGAGACTGGAGACATATGTCCTCACACCGGCTaGAGCACTGGACGTCGCCAT +
Preference number: 4 (lower is better)
Translates to: GPLVPTATKQCLVETGDICPHTG*STGRRH
Trigger: ATGGCGACGTCCAGTGCTCCAGCCGGTGTGAGGACA...TATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTGGTACTAGAGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CCA 90 bp TTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGAGAGCTGACTACAGGCTaGCCGCGGTGGCTCATGCCT +
Preference number: 4 (lower is better)
Translates to: LCYLYCSNEGFPRPQHLGELTTG*PRWLMP
Trigger: AGGCATGAGCCACCGCGGCCAGCCTGTAGTCAGCTC...TCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR GCA 90 bp GGTACAACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACCTGAGGTCACACCATTaGCCTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: GTTTCVTCTVAMRAFPGHLRSHH*PPAWAT
Trigger: TGTTGCCCAGGCTGGAGGGCAATGGTGTGACCTCAG...GTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTTGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR TCA 90 bp TCATCATCATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTGCACTGGACGTCGCCATaGCAGAGCTCAGGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: SSSSGTGSYKDGTQARMLHWTSP*QSSGAG
Trigger: TCCCGCCCCTGAGCTCTGTCATGGCGACGTCCAGTG...CAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATGATGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675378.1
CDS-3UTR TCA 90 bp TTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGAAGTGATTCCCCAGCCTaGGTCTCCCAAGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LCYLYCSNEGFPRPQHLGSDSPA*VSQVAG
Trigger: CCCAGCTACTTGGGAGACTCAGGCTGGGGAATCACT...TCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR CCA 90 bp TCTAGTACCAACTGCTACCAAACAGTGCTTGGTGGAGACTGGAGACATATGATGTGTCCTCACACCGGCTaGAGCACTGGACGTCGCCAT +
Preference number: 4 (lower is better)
Translates to: SSTNCYQTVLGGDWRHMMCPHTG*STGRRH
Trigger: ATGGCGACGTCCAGTGCTCCAGCCGGTGTGAGGACA...CATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTGGTACTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CCA 90 bp GGTCCTCTAGTACCAACTGCTACCAAACAGTGCTTGGTGGAGACTGGAGACATATCCTCCAAACCCGTTTaGCGTGCGGACAAAAACCCC +
Preference number: 4 (lower is better)
Translates to: GPLVPTATKQCLVETGDISSKPV*RADKNP
Trigger: GGGGTTTTTGTCCGCACGCCAAACGGGTTTGGAGGA...TATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTGGTACTAGAGGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CCA 90 bp GTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTATTAACCGGGCGCAGTaGCGGGAGCCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: VAMRAFPGHNIWDQGTHFINRAQ*REPVIP
Trigger: TGGGATTACAGGCTCCCGCCACTGCGCCCGGTTAAT...AAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR TCA 90 bp ATTGGAACTATTCCAGAGCCTCATTCGATTATCTGTACCAACAGTGAGGAGGTGACGGGGAGGTTGCAGTaGGCTGAGATTGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: IGTIPEPHSIICTNSEEVTGRLQ*AEIAPL
Trigger: CAGTGGCGCAATCTCAGCTCACTGCAACCTCCCCGT...CACCTCCTCACTGTTGGTACAGATAATCGAATGAGGCTCTGGAATAGTTCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643708.1
CDS-3UTR TCA 90 bp GGTACAACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACGGCAGGAAAATTGCTTaGACCTGGGAAGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GTTTCVTCTVAMRAFPGHGRKIA*TWEAEV
Trigger: AACCTCCGCTTCCCAGGTTCAAGCAATTTTCCTGCC...GTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTTGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR TCA 90 bp CAGAAGAGCATGAACTCGGAGAGCGGTTATCAATCCACTAGCACAAAGTTTACCGATCTCCTGACCTCGTaGTCCATCCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QKSMNSESGYQSTSTKFTDLLTS*SIHLSL
Trigger: GAGGCTGAGGTGGATGGATCACGAGGTCAGGAGATC...GGTAAACTTTGTGCTAGTGGATTGATAACCGCTCTCCGAGTTCATGCTCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR TCA 90 bp TTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGAATGGTCTCGATCTCCTaGCCTCGTGATCCATCCACC +
Preference number: 4 (lower is better)
Translates to: LCYLYCSNEGFPRPQHLGMVSIS*PRDPST
Trigger: GGTGGATGGATCACGAGGTCAGGAGATCGAGACCAT...TCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR GCA 90 bp GTCTCATCATCATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTGCGCCACTGGCCACTaGACTCCAGCATGGGTGACA +
Preference number: 4 (lower is better)
Translates to: VSSSSGTGSYKDGTQARMCATGH*TPAWVT
Trigger: TGTCACCCATGCTGGAGTGCAGTGGCCAGTGGCGCA...CATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATGATGATGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643708.1
CDS-3UTR GCA 90 bp GTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAAGGCGTGAGCCACCATaGCCAGCCCTTCCTTCATTT +
Preference number: 4 (lower is better)
Translates to: VTCTVAMRAFPGHNIWDQRREPP*PALPSF
Trigger: AAATGAAGGAAGGGCTGGGCATGGTGGCTCACGCCT...TTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR GCA 90 bp GCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTGACTTCACGCCATTCTCCTaGCTCAGCCTCCCAAATAGC +
Preference number: 4 (lower is better)
Translates to: AMRAFPGHNIWDQGTHFDFTPFS*LSLPNS
Trigger: GCTATTTGGGAGGCTGAGGCAGGAGAATGGCGTGAA...GTCAAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR CCA 90 bp GTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAATCCTCCAAACCCGTTTaGCGTGCGGACAAAAACCCC +
Preference number: 4 (lower is better)
Translates to: VTCTVAMRAFPGHNIWDQSSKPV*RADKNP
Trigger: GGGGTTTTTGTCCGCACGCCAAACGGGTTTGGAGGA...TTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
3UTR CAA 72 bp CATCATGCAGGGTGTAGAGAAGCTGGAATTAAGTGTTaGAGCCACATGGGAGAAGCAGCTCTCCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: HHAGCREAGIKC*SHMGEAALLLL
Trigger: CAGGAGCAGGAGAGCTGCTTCTCCCATGTGGCTCAAACACTTAATTCCAGCTTCTCTACACCCTGCATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR TCA 90 bp TTGGGTCCTCTAGTACCAACTGCTACCAAACAGTGCTTGGTGGAGACTGGAGACGCTGAAGGTCACAACTaGGGTACAACGACTTGTGTT +
Preference number: 4 (lower is better)
Translates to: LGPLVPTATKQCLVETGDAEGHN*GTTTCV
Trigger: AACACAAGTCGTTGTACCTCAGTTGTGACCTTCAGC...GTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTGGTACTAGAGGACCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR TCA 90 bp AAGTCACAAAGTTGTACTTTGGGTCCTCTAGTACCAACTGCTACCAAACAGTGCGCACTCCAGCATGGGTaGCAGAGCGAGACTCCGTTT +
Preference number: 4 (lower is better)
Translates to: KSQSCTLGPLVPTATKQCALQHG*QSETPF
Trigger: AAACGGAGTCTCGCTCTGTCACCCATGCTGGAGTGC...GCACTGTTTGGTAGCAGTTGGTACTAGAGGACCCAAAGTACAACTTTGTGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643708.1
CDS-3UTR TCA 90 bp GTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTACTCCTGAGCTCAAGTaGTCTGCCTGTCTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: VAMRAFPGHNIWDQGTHFTPELK*SACLSS
Trigger: TGAGCTGAGACAGGCAGATCACTTGAGCTCAGGAGT...AAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR GCA 90 bp GTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAACAAACCCGTTTGGCGTaGGGACAAAAACCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: VTCTVAMRAFPGHNIWDQQTRLA*GQKPQH
Trigger: ATGCTGGGGTTTTTGTCCGCACGCCAAACGGGTTTG...TTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR GCA 90 bp TTGGGTCCTCTAGTACCAACTGCTACCAAACAGTGCTTGGTGGAGACTGGAGACCTTCTTCATCACTGCTaGTCCAGGCATCTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LGPLVPTATKQCLVETGDLLHHC*SRHLQR
Trigger: CCTTTGAAGATGCCTGGAGCAGCAGTGATGAAGAAG...GTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTGGTACTAGAGGACCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CCA 90 bp TCTTCATCACTGCTGCTCCAGGCATCTTCAAAGGCCGGATTTAATTGTGATTTTTGTCCTCACACCGGCTaGAGCACTGGACGTCGCCAT +
Preference number: 4 (lower is better)
Translates to: SSSLLLQASSKAGFNCDFCPHTG*STGRRH
Trigger: ATGGCGACGTCCAGTGCTCCAGCCGGTGTGAGGACA...AAAATCACAATTAAATCCGGCCTTTGAAGATGCCTGGAGCAGCAGTGATGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR CCA 90 bp ATTCCAGAGCCTCATTCGATTATCTGTACCAACAGTGAGGAGGTGAAGTCCATCTTTGAGAGGCCGAGGTaGGTGGATCAACGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: IPEPHSIICTNSEEVKSIFERPR*VDQRRS
Trigger: TGACCTCCGTTGATCCACCCACCTCGGCCTCTCAAA...GATGGACTTCACCTCCTCACTGTTGGTACAGATAATCGAATGAGGCTCTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643708.1
CDS-3UTR TCA 90 bp AAGTCACAAAGTTGTACTTTGGGTCCTCTAGTACCAACTGCTACCAAACAGTGCCAAAACTCTCCGTGTTaGCTCTGCTCTCCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: KSQSCTLGPLVPTATKQCQNSPC*LCSPKA
Trigger: CGCCTTCGGAGAGCAGAGTCAACACGGAGAGTTTTG...GCACTGTTTGGTAGCAGTTGGTACTAGAGGACCCAAAGTACAACTTTGTGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR TCA 90 bp TGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACAAACATGCCAGTGTCATaGGGATACCACTGTACAGTC +
Preference number: 4 (lower is better)
Translates to: CTVAMRAFPGHNIWDQGTNMPVS*GYHCTV
Trigger: GACTGTACAGTGGTATCCTCATGACACTGGCATGTT...TGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp GGTCCTCTAGTACCAACTGCTACCAAACAGTGCTTGGTGGAGACTGGAGACATAAACATGCCAGTGTCATaGGGATACCACTGTACAGTC +
Preference number: 4 (lower is better)
Translates to: GPLVPTATKQCLVETGDINMPVS*GYHCTV
Trigger: GACTGTACAGTGGTATCCTCATGACACTGGCATGTT...TATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTGGTACTAGAGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR TCA 90 bp GCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTGACTATCTGTACCAACAGTaGGGAGGTGAAGTCCATCAC +
Preference number: 4 (lower is better)
Translates to: AMRAFPGHNIWDQGTHFDYLYQQ*GGEVHH
Trigger: GTGATGGACTTCACCTCCTCACTGTTGGTACAGATA...GTCAAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp TGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACAGCTGAAGGTCACAACTaGGGTACAACGACTTGTGTT +
Preference number: 4 (lower is better)
Translates to: CTVAMRAFPGHNIWDQGTAEGHN*GTTTCV
Trigger: AACACAAGTCGTTGTACCTCAGTTGTGACCTTCAGC...TGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp GGTACAACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAAGGTTGCAGTGAGCTaGGATCAAAACACTGCACTC +
Preference number: 4 (lower is better)
Translates to: GTTTCVTCTVAMRAFPGHKVAVS*DQNTAL
Trigger: GAGTGCAGTGTTTTGATCTCAGCTCACTGCAACCTT...GTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTTGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR TCA 90 bp GTGGCAGCAGGGGTAAGGACTGGGGAATGTGGTACTAATGTGGAAAGAGAGGGGAATGGGCAAAGAACCTaGAAAGACAGTTCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: VAAGVRTGECGTNVEREGNGQRT*KDSSQK
Trigger: CTTTTGAGAACTGTCTTTTCAGGTTCTTTGCCCATT...CCCCTCTCTTTCCACATTAGTACCACATTCCCCAGTCCTTACCCCTGCTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR TCA 90 bp AACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATGAACAGGGGACCAGCTaGAAACAACTGGGGGACATT +
Preference number: 4 (lower is better)
Translates to: NDLCYLYCSNEGFPRPQHEQGTS*KQLGDI
Trigger: AATGTCCCCCAGTTGTTTTCAGCTGGTCCCCTGTTC...ATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR TCA 90 bp AGGTACAACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCAAGGACATTGGGCACCTaGAAAGTCCTACACACAGAG +
Preference number: 4 (lower is better)
Translates to: RYNDLCYLYCSNEGFPRPRTLGT*KVLHTE
Trigger: CTCTGTGTGTAGGACTTTTCAGGTGCCCAATGTCCT...TGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTTGTACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR TCA 90 bp CAGAAGAGCATGAACTCGGAGAGCGGTTATCAATCCACTAGCACAAAGTTTACCGACCTCAGAAGAGCATaGACTCGGAGAGCGGTTATC +
Preference number: 4 (lower is better)
Translates to: QKSMNSESGYQSTSTKFTDLRRA*TRRAVI
Trigger: GATAACCGCTCTCCGAGTTCATGCTCTTCTGAGGTC...GGTAAACTTTGTGCTAGTGGATTGATAACCGCTCTCCGAGTTCATGCTCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR TCA 90 bp TACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACACTGGAATTAAGTGTTTaGGCCACATGGGAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: YCSNEGFPRPQHLGSRNTLELSV*ATWEKQ
Trigger: CTGCTTCTCCCATGTGGCTCAAACACTTAATTCCAG...TGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR GCA 90 bp GTGGCAGCAGGGGTAAGGACTGGGGAATGTGGTACTAATGTGGAAAGAGAGGGGGAATGTTGCAGTCTCTaGTACCACTATAAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: VAAGVRTGECGTNVEREGECCSL*YHYKVP
Trigger: AGGAACTTTATAGTGGTAGCAGAGACTGCAACATTC...CCCCTCTCTTTCCACATTAGTACCACATTCCCCAGTCCTTACCCCTGCTGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR GCA 90 bp GCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTGACCCCAAGCCAGAATGTTaGAGTCTCTGCTACCACTAT +
Preference number: 4 (lower is better)
Translates to: AMRAFPGHNIWDQGTHFDPKPEC*SLCYHY
Trigger: ATAGTGGTAGCAGAGACTGCAACATTCTGGCTTGGG...GTCAAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR GCA 90 bp TACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACACCCAAGCCAGAATGTTaGAGTCTCTGCTACCACTAT +
Preference number: 4 (lower is better)
Translates to: YCSNEGFPRPQHLGSRNTPKPEC*SLCYHY
Trigger: ATAGTGGTAGCAGAGACTGCAACATTCTGGCTTGGG...TGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CCA 90 bp AACAGAAGAACTAGCACTATCCTGAGCCCTAGATTTAACCTTCCGATGTCCAGATCCTCCAAACCCGTTTaGCGTGCGGACAAAAACCCC +
Preference number: 4 (lower is better)
Translates to: NRRTSTILSPRFNLPMSRSSKPV*RADKNP
Trigger: GGGGTTTTTGTCCGCACGCCAAACGGGTTTGGAGGA...TCTGGACATCGGAAGGTTAAATCTAGGGCTCAGGATAGTGCTAGTTCTTCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR TCA 90 bp GTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTAACATGCCAGTGTCATaGGGATACCACTGTACAGTC +
Preference number: 4 (lower is better)
Translates to: VAMRAFPGHNIWDQGTHFNMPVS*GYHCTV
Trigger: GACTGTACAGTGGTATCCTCATGACACTGGCATGTT...AAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp GTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTTATCTGTACCAACAGTaGGGAGGTGAAGTCCATCAC +
Preference number: 4 (lower is better)
Translates to: VAMRAFPGHNIWDQGTHFYLYQQ*GGEVHH
Trigger: GTGATGGACTTCACCTCCTCACTGTTGGTACAGATA...AAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR GCA 90 bp TTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGACCCAAGCCAGAATGTTaGAGTCTCTGCTACCACTAT +
Preference number: 4 (lower is better)
Translates to: LCYLYCSNEGFPRPQHLGPKPEC*SLCYHY
Trigger: ATAGTGGTAGCAGAGACTGCAACATTCTGGCTTGGG...TCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR GCA 90 bp CAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTGCAGTCTCTGCCTTCTTCATCACTGCTaGTCCAGGCATCTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: QELVHIRMEPKPECCSLCLLHHC*SRHLQR
Trigger: CCTTTGAAGATGCCTGGAGCAGCAGTGATGAAGAAG...GCAGAGACTGCAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR GCA 90 bp AACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGAGGCAGGAAAATTaGTTGAACCTGGGAAGCGGA +
Preference number: 4 (lower is better)
Translates to: NDLCYLYCSNEGFPRPQHLRQEN*LNLGSG
Trigger: TCCGCTTCCCAGGTTCAAGCAATTTTCCTGCCTCAG...ATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR CCA 90 bp AGTGCTTGGTGGAGACTGGAGACATATGATGACTATAAACTGTTTCCTCAAAATTGTCCTCACACCGGCTaGAGCACTGGACGTCGCCAT +
Preference number: 4 (lower is better)
Translates to: SAWWRLETYDDYKLFPQNCPHTG*STGRRH
Trigger: ATGGCGACGTCCAGTGCTCCAGCCGGTGTGAGGACA...ATTTTGAGGAAACAGTTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CCA 90 bp TTGGGTCCTCTAGTACCAACTGCTACCAAACAGTGCTTGGTGGAGACTGGAGACTTAATTCCACCGCCGTaGATTCTTTCAACATCTCTG +
Preference number: 4 (lower is better)
Translates to: LGPLVPTATKQCLVETGDLIPPP*ILSTSL
Trigger: CAGAGATGTTGAAAGAATCCACGGCGGTGGAATTAA...GTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTGGTACTAGAGGACCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CCA 90 bp GCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTGACCTACCAAACAGTGCTTaGTGGAGACTGGAGACATAT +
Preference number: 4 (lower is better)
Translates to: AMRAFPGHNIWDQGTHFDLPNSA*WRLETY
Trigger: ATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAG...GTCAAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CCA 90 bp GGTCCTCTAGTACCAACTGCTACCAAACAGTGCTTGGTGGAGACTGGAGACATACTACCAAACAGTGCTTaGTGGAGACTGGAGACATAT +
Preference number: 4 (lower is better)
Translates to: GPLVPTATKQCLVETGDILPNSA*WRLETY
Trigger: ATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAG...TATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTGGTACTAGAGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CCA 90 bp GGTACAACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACCTACCAAACAGTGCTTaGTGGAGACTGGAGACATAT +
Preference number: 4 (lower is better)
Translates to: GTTTCVTCTVAMRAFPGHLPNSA*WRLETY
Trigger: ATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAG...GTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTTGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp GCAAAATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGACAAAACTCTCCGTGTTaGCTCTGCTCTCCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: AKSFLKVETSRLIVQQVRQNSPC*LCSPKA
Trigger: CGCCTTCGGAGAGCAGAGTCAACACGGAGAGTTTTG...TCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGATTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp CATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTGCAGTCTCAACATGCCAGTGTCATaGGGATACCACTGTACAGTC +
Preference number: 4 (lower is better)
Translates to: HQELVHIRMEPKPECCSLNMPVS*GYHCTV
Trigger: GACTGTACAGTGGTATCCTCATGACACTGGCATGTT...GAGACTGCAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR TCA 90 bp GTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTCAAATGAGCTTGATGTaGACATGCCAGTGTCATGAG +
Preference number: 4 (lower is better)
Translates to: VAMRAFPGHNIWDQGTHFQMSLM*TCQCHE
Trigger: CTCATGACACTGGCATGTTCACATCAAGCTCATTTG...AAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp TGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCACAAATGAGCTTGATGTaGACATGCCAGTGTCATGAG +
Preference number: 4 (lower is better)
Translates to: CYLYCSNEGFPRPQHLGSQMSLM*TCQCHE
Trigger: CTCATGACACTGGCATGTTCACATCAAGCTCATTTG...TGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp TGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACAAGTAATCAAACATCCTaGTGCTCTTCTCACATCCCA +
Preference number: 4 (lower is better)
Translates to: CTVAMRAFPGHNIWDQGTSNQTS*CSSHIP
Trigger: TGGGATGTGAGAAGAGCATCAGGATGTTTGATTACT...TGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp GTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAACCAACAGTGAGGAGGTaGAGTCCATCACTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: VTCTVAMRAFPGHNIWDQPTVRR*SPSLVK
Trigger: TTTTACAAGTGATGGACTTCACCTCCTCACTGTTGG...TTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp TGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCACCAACAGTGAGGAGGTaGAGTCCATCACTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: CYLYCSNEGFPRPQHLGSPTVRR*SPSLVK
Trigger: TTTTACAAGTGATGGACTTCACCTCCTCACTGTTGG...TGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp TACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATACAAAAACAAATTCTaGACTGCAGCCACAGGAGAC +
Preference number: 4 (lower is better)
Translates to: YCSNEGFPRPQHLGSRNTYKNKF*TAATGD
Trigger: GTCTCCTGTGGCTGCAGTTCAGAATTTGTTTTTGTA...TGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp TACAACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAAGCTGAAGGTCACAACTaGGGTACAACGACTTGTGTT +
Preference number: 4 (lower is better)
Translates to: YNDLCYLYCSNEGFPRPQAEGHN*GTTTCV
Trigger: AACACAAGTCGTTGTACCTCAGTTGTGACCTTCAGC...TTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp TACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACAGTTCATAAAATCTGCTaGAGGTCACAACTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: YCSNEGFPRPQHLGSRNTVHKIC*RSQLRY
Trigger: GTACCTCAGTTGTGACCTTCAGCAGATTTTATGAAC...TGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp GCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTGACGTTCATAAAATCTGCTaGAGGTCACAACTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: AMRAFPGHNIWDQGTHFDVHKIC*RSQLRY
Trigger: GTACCTCAGTTGTGACCTTCAGCAGATTTTATGAAC...GTCAAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp GTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAAGAGAAAGTCAATACTaGTGGCCTCCACTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: VTCTVAMRAFPGHNIWDQRESQY*WPPLAD
Trigger: ATCAGCAAGTGGAGGCCATCAGTATTGACTTTCTCT...TTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp AACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATGGTTTGGACCTTCATTaGAAGAGCTCCCAAGAAGTC +
Preference number: 4 (lower is better)
Translates to: NDLCYLYCSNEGFPRPQHGLDLH*KSSQEV
Trigger: GACTTCTTGGGAGCTCTTTCAATGAAGGTCCAAACC...ATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR TCA 90 bp GTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGAACTAGCACTATCCTaGGCCCTAGATTTAACCTTC +
Preference number: 4 (lower is better)
Translates to: VTCTVAMRAFPGHNIWDQELALS*ALDLTF
Trigger: GAAGGTTAAATCTAGGGCTCAGGATAGTGCTAGTTC...TTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR TCA 90 bp TGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACAGACTCAGGACTTTTaGTTTCCAGTCCACTGTTAT +
Preference number: 4 (lower is better)
Translates to: CTVAMRAFPGHNIWDQGTQTQDF*FPVHCY
Trigger: ATAACAGTGGACTGGAAATCAAAAGTCCTGAGTCTG...TGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR GCA 90 bp AGGTACAACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACATCAGGATGATCTCTaGCAATGGAACACACTGCTT +
Preference number: 4 (lower is better)
Translates to: RYNDLCYLYCSNEGFPRPHQDDL*QWNTLL
Trigger: AAGCAGTGTGTTCCATTGGCAGAGATCATCCTGATG...TGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTTGTACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR GCA 90 bp CCAGAGCCTCATTCGATTATCTGTACCAACAGTGAGGAGGTGAAGTCCATCACTCATCAGGATGATCTCTaGCAATGGAACACACTGCTT +
Preference number: 4 (lower is better)
Translates to: PEPHSIICTNSEEVKSITHQDDL*QWNTLL
Trigger: AAGCAGTGTGTTCCATTGGCAGAGATCATCCTGATG...AGTGATGGACTTCACCTCCTCACTGTTGGTACAGATAATCGAATGAGGCTCTGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR GCA 90 bp GTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAACATCAGGATGATCTCTaGCAATGGAACACACTGCTT +
Preference number: 4 (lower is better)
Translates to: VTCTVAMRAFPGHNIWDQHQDDL*QWNTLL
Trigger: AAGCAGTGTGTTCCATTGGCAGAGATCATCCTGATG...TTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR GCA 90 bp GGTCCTCTAGTACCAACTGCTACCAAACAGTGCTTGGTGGAGACTGGAGACATAGTCAGCACTTGCTGTTaGCAAGATATAGTCATAACG +
Preference number: 4 (lower is better)
Translates to: GPLVPTATKQCLVETGDIVSTCC*QDIVIT
Trigger: CGTTATGACTATATCTTGGCAACAGCAAGTGCTGAC...TATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTGGTACTAGAGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR GCA 90 bp TGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACAGTCAGCACTTGCTGTTaGCAAGATATAGTCATAACG +
Preference number: 4 (lower is better)
Translates to: CTVAMRAFPGHNIWDQGTVSTCC*QDIVIT
Trigger: CGTTATGACTATATCTTGGCAACAGCAAGTGCTGAC...TGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR GCA 90 bp TTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGAATCCTTCTTCATCACTaGTGCTCCAGGCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: LCYLYCSNEGFPRPQHLGILLHH*CSRHLQ
Trigger: TTGAAGATGCCTGGAGCAGCAGTGATGAAGAAGGAT...TCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR GCA 90 bp GCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTGACTTAAGCCAGATTCCCTaGCAGGATATTTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: AMRAFPGHNIWDQGTHFDLSQIP*QDIFCL
Trigger: CAAGCAGAAAATATCCTGGCAGGGAATCTGGCTTAA...GTCAAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR GCA 90 bp AGATATAGTCATAACGTGGAGACCAGGAAACTGCTAATATTTCTTGTCTGTGACTCAGGACGGGGAGGTTaGAGTGAGCTGAGATTGCGC +
Preference number: 4 (lower is better)
Translates to: RYSHNVETRKLLIFLVCDSGRGG*SELRLR
Trigger: GCGCAATCTCAGCTCACTGCAACCTCCCCGTCCTGA...GTCACAGACAAGAAATATTAGCAGTTTCCTGGTCTCCACGTTATGACTATATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643708.1
CDS-3UTR CCA 90 bp TCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTTCCTCCAAACCCGTTTaGCGTGCGGACAAAAACCCC +
Preference number: 4 (lower is better)
Translates to: SFLKVETSRLIVQQVRESSSKPV*RADKNP
Trigger: GGGGTTTTTGTCCGCACGCCAAACGGGTTTGGAGGA...ACTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CCA 90 bp AACAGTGCTTGGTGGAGACTGGAGACATATGATGACTATAAACTGTTTCCTCAATCCTCCAAACCCGTTTaGCGTGCGGACAAAAACCCC +
Preference number: 4 (lower is better)
Translates to: NSAWWRLETYDDYKLFPQSSKPV*RADKNP
Trigger: GGGGTTTTTGTCCGCACGCCAAACGGGTTTGGAGGA...TTGAGGAAACAGTTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CCA 90 bp GATCTTTATTTCCCTGCTGAGTCTCAACAACCAGCACAAAGTACATTAGTCATGTCCTCCAAACCCGTTTaGCGTGCGGACAAAAACCCC +
Preference number: 4 (lower is better)
Translates to: DLYFPAESQQPAQSTLVMSSKPV*RADKNP
Trigger: GGGGTTTTTGTCCGCACGCCAAACGGGTTTGGAGGA...CATGACTAATGTACTTTGTGCTGGTTGTTGAGACTCAGCAGGGAAATAAAGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497892.6
ENST00000675229.1
CDS-3UTR CCA 90 bp GCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTGACTTAATTCCACCGCCGTaGATTCTTTCAACATCTCTG +
Preference number: 4 (lower is better)
Translates to: AMRAFPGHNIWDQGTHFDLIPPP*ILSTSL
Trigger: CAGAGATGTTGAAAGAATCCACGGCGGTGGAATTAA...GTCAAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CCA 90 bp GCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTGACGATGATCTCTGCCAATaGAACACACTGCTTTACATG +
Preference number: 4 (lower is better)
Translates to: AMRAFPGHNIWDQGTHFDDDLCQ*NTLLYM
Trigger: CATGTAAAGCAGTGTGTTCCATTGGCAGAGATCATC...GTCAAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CCA 90 bp GTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTCCAAACAGTGCTTGGTaGAGACTGGAGACATATGAT +
Preference number: 4 (lower is better)
Translates to: VAMRAFPGHNIWDQGTHFPNSAW*RLETYD
Trigger: ATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGG...AAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CCA 90 bp AGGTACAACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACCAGGCCACAACATCTaGGATCAAGGAACACATTTT +
Preference number: 4 (lower is better)
Translates to: RYNDLCYLYCSNEGFPRPPGHNI*DQGTHF
Trigger: AAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGG...TGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTTGTACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CCA 90 bp GCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTGACTCTAGGTTAATAACTTaGTTTGTGGCAGCAGGGGTA +
Preference number: 4 (lower is better)
Translates to: AMRAFPGHNIWDQGTHFDSRLIT*FVAAGV
Trigger: TACCCCTGCTGCCACAAACCAAGTTATTAACCTAGA...GTCAAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR CCA 90 bp GCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTGACTATCTTCATGAGGAGTaGTCAGTCAAGAGGACATTG +
Preference number: 4 (lower is better)
Translates to: AMRAFPGHNIWDQGTHFDYLHEE*SVKRTL
Trigger: CAATGTCCTCTTGACTGACCACTCCTCATGAAGATA...GTCAAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR CCA 90 bp CAGAAGAGCATGAACTCGGAGAGCGGTTATCAATCCACTAGCACAAAGTTTACCCTCTCCTGCTCCTGGTaGTGTTTTTACAGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: QKSMNSESGYQSTSTKFTLSCSW*CFYRRC
Trigger: ACACCTTCTGTAAAAACACCACCAGGAGCAGGAGAG...GGTAAACTTTGTGCTAGTGGATTGATAACCGCTCTCCGAGTTCATGCTCTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR CCA 90 bp ATAATCATTCTTGGCAAAATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTCAGGCCGGAGTGCAGTaGCGCAATCTCGGCTTACTG +
Preference number: 4 (lower is better)
Translates to: IIILGKIILKGGNEQADSQAGVQ*RNLGLL
Trigger: CAGTAAGCCGAGATTGCGCCACTGCACTCCGGCCTG...ACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGATTTTGCCAAGAATGATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR TCA 90 bp AGTGCTTGGTGGAGACTGGAGACATATGATGACTATAAACTGTTTCCTCAAAATCAAAACTCTCCGTGTTaGCTCTGCTCTCCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: SAWWRLETYDDYKLFPQNQNSPC*LCSPKA
Trigger: CGCCTTCGGAGAGCAGAGTCAACACGGAGAGTTTTG...ATTTTGAGGAAACAGTTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR TCA 90 bp TTGCCAAGATATAGTCATAACGTGGAGACCAGGAAACTGCTAATATTTCTTGTCCAAAACTCTCCGTGTTaGCTCTGCTCTCCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: LPRYSHNVETRKLLIFLVQNSPC*LCSPKA
Trigger: CGCCTTCGGAGAGCAGAGTCAACACGGAGAGTTTTG...GACAAGAAATATTAGCAGTTTCCTGGTCTCCACGTTATGACTATATCTTGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR TCA 90 bp CAGAAGAGCATGAACTCGGAGAGCGGTTATCAATCCACTAGCACAAAGTTTACCCAAATGAGCTTGATGTaGACATGCCAGTGTCATGAG +
Preference number: 4 (lower is better)
Translates to: QKSMNSESGYQSTSTKFTQMSLM*TCQCHE
Trigger: CTCATGACACTGGCATGTTCACATCAAGCTCATTTG...GGTAAACTTTGTGCTAGTGGATTGATAACCGCTCTCCGAGTTCATGCTCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR TCA 90 bp GTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTAGTAATCAAACATCCTaGTGCTCTTCTCACATCCCA +
Preference number: 4 (lower is better)
Translates to: VAMRAFPGHNIWDQGTHFSNQTS*CSSHIP
Trigger: TGGGATGTGAGAAGAGCATCAGGATGTTTGATTACT...AAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp TCTAGTACCAACTGCTACCAAACAGTGCTTGGTGGAGACTGGAGACATATGATGCCAACAGTGAGGAGGTaGAGTCCATCACTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: SSTNCYQTVLGGDWRHMMPTVRR*SPSLVK
Trigger: TTTTACAAGTGATGGACTTCACCTCCTCACTGTTGG...CATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTGGTACTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR TCA 90 bp AAGTCACAAAGTTGTACTTTGGGTCCTCTAGTACCAACTGCTACCAAACAGTGCTATCTGTACCAACAGTaGGGAGGTGAAGTCCATCAC +
Preference number: 4 (lower is better)
Translates to: KSQSCTLGPLVPTATKQCYLYQQ*GGEVHH
Trigger: GTGATGGACTTCACCTCCTCACTGTTGGTACAGATA...GCACTGTTTGGTAGCAGTTGGTACTAGAGGACCCAAAGTACAACTTTGTGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR TCA 90 bp TGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCATACAAAAACAAATTCTaGACTGCAGCCACAGGAGAC +
Preference number: 4 (lower is better)
Translates to: CYLYCSNEGFPRPQHLGSYKNKF*TAATGD
Trigger: GTCTCCTGTGGCTGCAGTTCAGAATTTGTTTTTGTA...TGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp GTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAATACAAAAACAAATTCTaGACTGCAGCCACAGGAGAC +
Preference number: 4 (lower is better)
Translates to: VTCTVAMRAFPGHNIWDQYKNKF*TAATGD
Trigger: GTCTCCTGTGGCTGCAGTTCAGAATTTGTTTTTGTA...TTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp TTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATACAAAAACAAATTCTaGACTGCAGCCACAGGAGAC +
Preference number: 4 (lower is better)
Translates to: LCYLYCSNEGFPRPQHLGYKNKF*TAATGD
Trigger: GTCTCCTGTGGCTGCAGTTCAGAATTTGTTTTTGTA...TCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp GGTCCTCTAGTACCAACTGCTACCAAACAGTGCTTGGTGGAGACTGGAGACATATCCTGGAAATTTGACTaGAATACACAGCAGTCAACA +
Preference number: 4 (lower is better)
Translates to: GPLVPTATKQCLVETGDISWKFD*NTQQST
Trigger: TGTTGACTGCTGTGTATTTCAGTCAAATTTCCAGGA...TATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTGGTACTAGAGGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR TCA 90 bp GCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTGACTCCTGGAAATTTGACTaGAATACACAGCAGTCAACA +
Preference number: 4 (lower is better)
Translates to: AMRAFPGHNIWDQGTHFDSWKFD*NTQQST
Trigger: TGTTGACTGCTGTGTATTTCAGTCAAATTTCCAGGA...GTCAAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000676185.1
CDS-3UTR TCA 90 bp TTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGAGTTCATAAAATCTGCTaGAGGTCACAACTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: LCYLYCSNEGFPRPQHLGVHKIC*RSQLRY
Trigger: GTACCTCAGTTGTGACCTTCAGCAGATTTTATGAAC...TCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp AGGTACAACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCAGTTCATAAAATCTGCTaGAGGTCACAACTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: RYNDLCYLYCSNEGFPRPVHKIC*RSQLRY
Trigger: GTACCTCAGTTGTGACCTTCAGCAGATTTTATGAAC...TGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTTGTACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp TACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACAGATAGTAGGAGACATTaGGCCCCAAAATGTTTAACA +
Preference number: 4 (lower is better)
Translates to: YCSNEGFPRPQHLGSRNTDSRRH*APKCLT
Trigger: TGTTAAACATTTTGGGGCTCAATGTCTCCTACTATC...TGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR GCA 90 bp GTGTGTTTTCTCCATTGGAACTATTCCAGAGCCTCATTCGATTATCTGTACCAACAAACCCGTTTGGCGTaGGGACAAAAACCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: VCFLHWNYSRASFDYLYQQTRLA*GQKPQH
Trigger: ATGCTGGGGTTTTTGTCCGCACGCCAAACGGGTTTG...TTGGTACAGATAATCGAATGAGGCTCTGGAATAGTTCCAATGGAGAAAACACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR GCA 90 bp AACAGTGCTTGGTGGAGACTGGAGACATATGATGACTATAAACTGTTTCCTCAACAAACCCGTTTGGCGTaGGGACAAAAACCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: NSAWWRLETYDDYKLFPQQTRLA*GQKPQH
Trigger: ATGCTGGGGTTTTTGTCCGCACGCCAAACGGGTTTG...TTGAGGAAACAGTTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR GCA 90 bp TTTTCTCCATTGGAACTATTCCAGAGCCTCATTCGATTATCTGTACCAACAGTGCAAACCCGTTTGGCGTaGGGACAAAAACCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: FSPLELFQSLIRLSVPTVQTRLA*GQKPQH
Trigger: ATGCTGGGGTTTTTGTCCGCACGCCAAACGGGTTTG...CACTGTTGGTACAGATAATCGAATGAGGCTCTGGAATAGTTCCAATGGAGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR GCA 90 bp TTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGAGTCAGCACTTGCTGTTaGCAAGATATAGTCATAACG +
Preference number: 4 (lower is better)
Translates to: LCYLYCSNEGFPRPQHLGVSTCC*QDIVIT
Trigger: CGTTATGACTATATCTTGGCAACAGCAAGTGCTGAC...TCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR GCA 90 bp GCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTGACGAATGTTGCAGTCTCTaGTACCACTATAAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: AMRAFPGHNIWDQGTHFDECCSL*YHYKVP
Trigger: AGGAACTTTATAGTGGTAGCAGAGACTGCAACATTC...GTCAAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR GCA 90 bp AAGTCACAAAGTTGTACTTTGGGTCCTCTAGTACCAACTGCTACCAAACAGTGCCCCAAGCCAGAATGTTaGAGTCTCTGCTACCACTAT +
Preference number: 4 (lower is better)
Translates to: KSQSCTLGPLVPTATKQCPKPEC*SLCYHY
Trigger: ATAGTGGTAGCAGAGACTGCAACATTCTGGCTTGGG...GCACTGTTTGGTAGCAGTTGGTACTAGAGGACCCAAAGTACAACTTTGTGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR GCA 90 bp CTTCATCACTGCTGCTCCAGGCATCTTCAAAGGCCGGATTTAATTGTGATTTTGCTTCTTCATCACTGCTaGTCCAGGCATCTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LHHCCSRHLQRPDLIVILLLHHC*SRHLQR
Trigger: CCTTTGAAGATGCCTGGAGCAGCAGTGATGAAGAAG...CAAAATCACAATTAAATCCGGCCTTTGAAGATGCCTGGAGCAGCAGTGATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR GCA 90 bp CATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTGCAGTCTCATCCTTCTTCATCACTaGTGCTCCAGGCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: HQELVHIRMEPKPECCSLILLHH*CSRHLQ
Trigger: TTGAAGATGCCTGGAGCAGCAGTGATGAAGAAGGAT...GAGACTGCAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR CCA 90 bp TCTGTTCTCCTGAGTAAACTGTATAAACAGCAATGGTGCTACCATATGGTACAATCCTCCAAACCCGTTTaGCGTGCGGACAAAAACCCC +
Preference number: 4 (lower is better)
Translates to: SVLLSKLYKQQWCYHMVQSSKPV*RADKNP
Trigger: GGGGTTTTTGTCCGCACGCCAAACGGGTTTGGAGGA...TTGTACCATATGGTAGCACCATTGCTGTTTATACAGTTTACTCAGGAGAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CCA 90 bp GTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTTTAATTCCACCGCCGTaGATTCTTTCAACATCTCTG +
Preference number: 4 (lower is better)
Translates to: VAMRAFPGHNIWDQGTHFLIPPP*ILSTSL
Trigger: CAGAGATGTTGAAAGAATCCACGGCGGTGGAATTAA...AAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CCA 90 bp TTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGAGTGCTTGGTGGAGACTaGAGACATATGATGACTATA +
Preference number: 4 (lower is better)
Translates to: LCYLYCSNEGFPRPQHLGVLGGD*RHMMTI
Trigger: TATAGTCATCATATGTCTCCAGTCTCCACCAAGCAC...TCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CCA 90 bp AACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCCAAACAGTGCTTGGTaGAGACTGGAGACATATGAT +
Preference number: 4 (lower is better)
Translates to: NDLCYLYCSNEGFPRPQHPNSAW*RLETYD
Trigger: ATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGG...ATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CCA 90 bp TACAACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACCAGGCCACAACATCTaGGATCAAGGAACACATTTT +
Preference number: 4 (lower is better)
Translates to: YNDLCYLYCSNEGFPRPQPGHNI*DQGTHF
Trigger: AAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGG...TTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CCA 90 bp AGAGTAATCAAACATCCTGATGCTCTTCTCACATCCCATAATTTTACTCTACTGCTGAGATTGCGCCACTaGCCACTGCACTCCAGCATG +
Preference number: 4 (lower is better)
Translates to: RVIKHPDALLTSHNFTLLLRLRH*PLHSSM
Trigger: CATGCTGGAGTGCAGTGGCCAGTGGCGCAATCTCAG...CAGTAGAGTAAAATTATGGGATGTGAGAAGAGCATCAGGATGTTTGATTACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643708.1
CDS-3UTR CCA 90 bp ATAATCATTCTTGGCAAAATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTCTCTGTCACTCAGGGTaGAGTGCAGTGGGGCGATCT +
Preference number: 4 (lower is better)
Translates to: IIILGKIILKGGNEQADSLCHSG*SAVGRS
Trigger: AGATCGCCCCACTGCACTCCACCCTGAGTGACAGAG...ACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGATTTTGCCAAGAATGATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR CAA 72 bp GAACAGGATCCAGACTTCAAGTCACAAAGTTGTACTTaGGGTCCTCTAGTACCAACTGCTACCAAACAGTGC +
Preference number: 4 (lower is better)
Translates to: EQDPDFKSQSCT*GPLVPTATKQC
Trigger: GCACTGTTTGGTAGCAGTTGGTACTAGAGGACCCAAAGTACAACTTTGTGACTTGAAGTCTGGATCCTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
CDS-3UTR TCA 90 bp AGAGTAATCAAACATCCTGATGCTCTTCTCACATCCCATAATTTTACTCTACTGCAAAACTCTCCGTGTTaGCTCTGCTCTCCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: RVIKHPDALLTSHNFTLLQNSPC*LCSPKA
Trigger: CGCCTTCGGAGAGCAGAGTCAACACGGAGAGTTTTG...CAGTAGAGTAAAATTATGGGATGTGAGAAGAGCATCAGGATGTTTGATTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR TCA 90 bp GAACAGGATCCAGACTTCAAGTCACAAAGTTGTACTTTGGGTCCTCTAGTACCACAAATGAGCTTGATGTaGACATGCCAGTGTCATGAG +
Preference number: 4 (lower is better)
Translates to: EQDPDFKSQSCTLGPLVPQMSLM*TCQCHE
Trigger: CTCATGACACTGGCATGTTCACATCAAGCTCATTTG...TGGTACTAGAGGACCCAAAGTACAACTTTGTGACTTGAAGTCTGGATCCTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR TCA 90 bp TACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACAAGTTATCTGTTCTCCTaGGTAAACTGTATAAACAGC +
Preference number: 4 (lower is better)
Translates to: YCSNEGFPRPQHLGSRNTSYLFS*VNCINS
Trigger: GCTGTTTATACAGTTTACTCAGGAGAACAGATAACT...TGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp TTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCCTGGAAATTTGACTaGAATACACAGCAGTCAACA +
Preference number: 4 (lower is better)
Translates to: LCYLYCSNEGFPRPQHLGSWKFD*NTQQST
Trigger: TGTTGACTGCTGTGTATTTCAGTCAAATTTCCAGGA...TCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000676185.1
CDS-3UTR TCA 90 bp GAATGTGAGAACAGGATCCAGACTTCAAGTCACAAAGTTGTACTTTGGGTCCTCAGAGAAAGTCAATACTaGTGGCCTCCACTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: ECENRIQTSSHKVVLWVLRESQY*WPPLAD
Trigger: ATCAGCAAGTGGAGGCCATCAGTATTGACTTTCTCT...GAGGACCCAAAGTACAACTTTGTGACTTGAAGTCTGGATCCTGTTCTCACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR TCA 90 bp TGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAGATAGTAGGAGACATTaGGCCCCAAAATGTTTAACA +
Preference number: 4 (lower is better)
Translates to: CYLYCSNEGFPRPQHLGSDSRRH*APKCLT
Trigger: TGTTAAACATTTTGGGGCTCAATGTCTCCTACTATC...TGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp CCAGAGCCTCATTCGATTATCTGTACCAACAGTGAGGAGGTGAAGTCCATCACTGTTAAAAGCCTCCTGTaGTGCACATTTTGGATAGTA +
Preference number: 4 (lower is better)
Translates to: PEPHSIICTNSEEVKSITVKSLL*CTFWIV
Trigger: TACTATCCAAAATGTGCATCACAGGAGGCTTTTAAC...AGTGATGGACTTCACCTCCTCACTGTTGGTACAGATAATCGAATGAGGCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR TCA 90 bp ACCAACTGCTACCAAACAGTGCTTGGTGGAGACTGGAGACATATGATGACTATAATACCCTGTAGAATGTaGGAACAGGATCCAGACTTC +
Preference number: 4 (lower is better)
Translates to: TNCYQTVLGGDWRHMMTIIPCRM*EQDPDF
Trigger: GAAGTCTGGATCCTGTTCTCACATTCTACAGGGTAT...TATAGTCATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497892.6
CDS-3UTR TCA 90 bp CAGAAGAGCATGAACTCGGAGAGCGGTTATCAATCCACTAGCACAAAGTTTACCGTGTTGGCAAGGATGTaGAGAAAAAGGATTTCTTGC +
Preference number: 4 (lower is better)
Translates to: QKSMNSESGYQSTSTKFTVLARM*RKRISC
Trigger: GCAAGAAATCCTTTTTCTTCACATCCTTGCCAACAC...GGTAAACTTTGTGCTAGTGGATTGATAACCGCTCTCCGAGTTCATGCTCTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR GCA 90 bp GGTACAACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACTGTAATAAGATTGTCTaGTGGAGTTCTCAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: GTTTCVTCTVAMRAFPGHCNKIV*WSSQGH
Trigger: ATGACCTTGAGAACTCCAGCAGACAATCTTATTACA...GTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTTGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR GCA 90 bp GAACAGGATCCAGACTTCAAGTCACAAAGTTGTACTTTGGGTCCTCTAGTACCACATCAGGATGATCTCTaGCAATGGAACACACTGCTT +
Preference number: 4 (lower is better)
Translates to: EQDPDFKSQSCTLGPLVPHQDDL*QWNTLL
Trigger: AAGCAGTGTGTTCCATTGGCAGAGATCATCCTGATG...TGGTACTAGAGGACCCAAAGTACAACTTTGTGACTTGAAGTCTGGATCCTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR GCA 90 bp AACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATGTCAGCACTTGCTGTTaGCAAGATATAGTCATAACG +
Preference number: 4 (lower is better)
Translates to: NDLCYLYCSNEGFPRPQHVSTCC*QDIVIT
Trigger: CGTTATGACTATATCTTGGCAACAGCAAGTGCTGAC...ATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR GCA 90 bp TGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAGAATGTTGCAGTCTCTaGTACCACTATAAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: CYLYCSNEGFPRPQHLGSECCSL*YHYKVP
Trigger: AGGAACTTTATAGTGGTAGCAGAGACTGCAACATTC...TGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR GCA 90 bp TACAACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAATTAAGCCAGATTCCCTaGCAGGATATTTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: YNDLCYLYCSNEGFPRPQLSQIP*QDIFCL
Trigger: CAAGCAGAAAATATCCTGGCAGGGAATCTGGCTTAA...TTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR GCA 90 bp TACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACAGTAATTAGCTTTCCCTaGTATATTTTTCGACAGGCA +
Preference number: 4 (lower is better)
Translates to: YCSNEGFPRPQHLGSRNTVISFP*YIFRQA
Trigger: TGCCTGTCGAAAAATATAGCAGGGAAAGCTAATTAC...TGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR GCA 90 bp AACAGAAGAACTAGCACTATCCTGAGCCCTAGATTTAACCTTCCGATGTCCAGAAAGAAAACTGGCTTGTaGCAGTCACCTGAGCCAATA +
Preference number: 4 (lower is better)
Translates to: NRRTSTILSPRFNLPMSRKKTGL*QSPEPI
Trigger: TATTGGCTCAGGTGACTGGCACAAGCCAGTTTTCTT...TCTGGACATCGGAAGGTTAAATCTAGGGCTCAGGATAGTGCTAGTTCTTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR CCA 90 bp CAGAAGAGCATGAACTCGGAGAGCGGTTATCAATCCACTAGCACAAAGTTTACCTTAATTCCACCGCCGTaGATTCTTTCAACATCTCTG +
Preference number: 4 (lower is better)
Translates to: QKSMNSESGYQSTSTKFTLIPPP*ILSTSL
Trigger: CAGAGATGTTGAAAGAATCCACGGCGGTGGAATTAA...GGTAAACTTTGTGCTAGTGGATTGATAACCGCTCTCCGAGTTCATGCTCTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR CCA 90 bp TACAACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAAGATGATCTCTGCCAATaGAACACACTGCTTTACATG +
Preference number: 4 (lower is better)
Translates to: YNDLCYLYCSNEGFPRPQDDLCQ*NTLLYM
Trigger: CATGTAAAGCAGTGTGTTCCATTGGCAGAGATCATC...TTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CCA 90 bp CATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTGCAGTCTCGTGCTTGGTGGAGACTaGAGACATATGATGACTATA +
Preference number: 4 (lower is better)
Translates to: HQELVHIRMEPKPECCSLVLGGD*RHMMTI
Trigger: TATAGTCATCATATGTCTCCAGTCTCCACCAAGCAC...GAGACTGCAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR CCA 90 bp ACCAACTGCTACCAAACAGTGCTTGGTGGAGACTGGAGACATATGATGACTATACCAAACAGTGCTTGGTaGAGACTGGAGACATATGAT +
Preference number: 4 (lower is better)
Translates to: TNCYQTVLGGDWRHMMTIPNSAW*RLETYD
Trigger: ATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGG...TATAGTCATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CCA 90 bp CTTCATCACTGCTGCTCCAGGCATCTTCAAAGGCCGGATTTAATTGTGATTTTGCTACCAAACAGTGCTTaGTGGAGACTGGAGACATAT +
Preference number: 4 (lower is better)
Translates to: LHHCCSRHLQRPDLIVILLPNSA*WRLETY
Trigger: ATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAG...CAAAATCACAATTAAATCCGGCCTTTGAAGATGCCTGGAGCAGCAGTGATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR CCA 90 bp GGTACAACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACCTGTATAAACAGCAATaGTGCTACCATATGGTACAA +
Preference number: 4 (lower is better)
Translates to: GTTTCVTCTVAMRAFPGHLYKQQ*CYHMVQ
Trigger: TTGTACCATATGGTAGCACCATTGCTGTTTATACAG...GTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTTGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CCA 90 bp GGTACAACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAATGTGGTACTAATGTaGAAAGAGAGGGGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: GTTTCVTCTVAMRAFPGHNVVLM*KERGVY
Trigger: ATAAACACCCCTCTCTTTCCACATTAGTACCACATT...GTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTTGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR CAA 72 bp GCTCTCCTGCTCCTGGTGGTGTTTTTACAGAAGGTGTaGACAAGCTCTCATTTAGTACTGTTGCTAATCCTT +
Preference number: 4 (lower is better)
Translates to: ALLLLVVFLQKV*TSSHLVLLLIL
Trigger: AAGGATTAGCAACAGTACTAAATGAGAGCTTGTCAACACCTTCTGTAAAAACACCACCAGGAGCAGGAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR TCA 90 bp TCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTAACATGCCAGTGTCATaGGGATACCACTGTACAGTC +
Preference number: 4 (lower is better)
Translates to: SFLKVETSRLIVQQVRESNMPVS*GYHCTV
Trigger: GACTGTACAGTGGTATCCTCATGACACTGGCATGTT...ACTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp GATCTTTATTTCCCTGCTGAGTCTCAACAACCAGCACAAAGTACATTAGTCATGAACATGCCAGTGTCATaGGGATACCACTGTACAGTC +
Preference number: 4 (lower is better)
Translates to: DLYFPAESQQPAQSTLVMNMPVS*GYHCTV
Trigger: GACTGTACAGTGGTATCCTCATGACACTGGCATGTT...CATGACTAATGTACTTTGTGCTGGTTGTTGAGACTCAGCAGGGAAATAAAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497892.6
ENST00000675229.1
CDS-3UTR TCA 90 bp ATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGAACATGCCAGTGTCATaGGGATACCACTGTACAGTC +
Preference number: 4 (lower is better)
Translates to: IILKGGNEQADSTASKRKNMPVS*GYHCTV
Trigger: GACTGTACAGTGGTATCCTCATGACACTGGCATGTT...CTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp GAACAGGATCCAGACTTCAAGTCACAAAGTTGTACTTTGGGTCCTCTAGTACCAAGTAATCAAACATCCTaGTGCTCTTCTCACATCCCA +
Preference number: 4 (lower is better)
Translates to: EQDPDFKSQSCTLGPLVPSNQTS*CSSHIP
Trigger: TGGGATGTGAGAAGAGCATCAGGATGTTTGATTACT...TGGTACTAGAGGACCCAAAGTACAACTTTGTGACTTGAAGTCTGGATCCTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR TCA 90 bp GTCTCATCATCATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGAGTAATCAAACATCCTaGTGCTCTTCTCACATCCCA +
Preference number: 4 (lower is better)
Translates to: VSSSSGTGSYKDGTQARMSNQTS*CSSHIP
Trigger: TGGGATGTGAGAAGAGCATCAGGATGTTTGATTACT...CATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATGATGATGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR TCA 90 bp AACAGTGCTTGGTGGAGACTGGAGACATATGATGACTATAAACTGTTTCCTCAATATCTGTACCAACAGTaGGGAGGTGAAGTCCATCAC +
Preference number: 4 (lower is better)
Translates to: NSAWWRLETYDDYKLFPQYLYQQ*GGEVHH
Trigger: GTGATGGACTTCACCTCCTCACTGTTGGTACAGATA...TTGAGGAAACAGTTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR TCA 90 bp CTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTGCAGTCTCTGCTACCACAGTTATCTGTTCTCCTaGGTAAACTGTATAAACAGC +
Preference number: 4 (lower is better)
Translates to: LVHIRMEPKPECCSLCYHSYLFS*VNCINS
Trigger: GCTGTTTATACAGTTTACTCAGGAGAACAGATAACT...GTGGTAGCAGAGACTGCAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR TCA 90 bp AGGTACAACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCAAGTTATCTGTTCTCCTaGGTAAACTGTATAAACAGC +
Preference number: 4 (lower is better)
Translates to: RYNDLCYLYCSNEGFPRPSYLFS*VNCINS
Trigger: GCTGTTTATACAGTTTACTCAGGAGAACAGATAACT...TGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTTGTACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp TTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTCAATACGCTGAAGGTCACAACTaGGGTACAACGACTTGTGTT +
Preference number: 4 (lower is better)
Translates to: LKVETSRLIVQQVRESQYAEGHN*GTTTCV
Trigger: AACACAAGTCGTTGTACCTCAGTTGTGACCTTCAGC...GTATTGACTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp AGGTACAACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACCACAATGGATGAAATaGACAAAAGAAAACTGGCTT +
Preference number: 4 (lower is better)
Translates to: RYNDLCYLYCSNEGFPRPPQWMK*TKENWL
Trigger: AAGCCAGTTTTCTTTTGTTCATTTCATCCATTGTGG...TGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTTGTACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR GCA 90 bp AGAGTAATCAAACATCCTGATGCTCTTCTCACATCCCATAATTTTACTCTACTGCAAACCCGTTTGGCGTaGGGACAAAAACCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: RVIKHPDALLTSHNFTLLQTRLA*GQKPQH
Trigger: ATGCTGGGGTTTTTGTCCGCACGCCAAACGGGTTTG...CAGTAGAGTAAAATTATGGGATGTGAGAAGAGCATCAGGATGTTTGATTACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR GCA 90 bp GTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTTGTAATAAGATTGTCTaGTGGAGTTCTCAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: VAMRAFPGHNIWDQGTHFCNKIV*WSSQGH
Trigger: ATGACCTTGAGAACTCCAGCAGACAATCTTATTACA...AAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR GCA 90 bp TTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGAGCCAATGGAACACACTaGTTTACATGTGTAATAAGA +
Preference number: 4 (lower is better)
Translates to: LCYLYCSNEGFPRPQHLGANGTH*FTCVIR
Trigger: TCTTATTACACATGTAAAGCAGTGTGTTCCATTGGC...TCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR GCA 90 bp AGACTTCAAGTCACAAAGTTGTACTTTGGGTCCTCTAGTACCAACTGCTACCAACATCAGGATGATCTCTaGCAATGGAACACACTGCTT +
Preference number: 4 (lower is better)
Translates to: RLQVTKLYFGSSSTNCYQHQDDL*QWNTLL
Trigger: AAGCAGTGTGTTCCATTGGCAGAGATCATCCTGATG...TTGGTAGCAGTTGGTACTAGAGGACCCAAAGTACAACTTTGTGACTTGAAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR GCA 90 bp AAGTCACAAAGTTGTACTTTGGGTCCTCTAGTACCAACTGCTACCAAACAGTGCGTCAGCACTTGCTGTTaGCAAGATATAGTCATAACG +
Preference number: 4 (lower is better)
Translates to: KSQSCTLGPLVPTATKQCVSTCC*QDIVIT
Trigger: CGTTATGACTATATCTTGGCAACAGCAAGTGCTGAC...GCACTGTTTGGTAGCAGTTGGTACTAGAGGACCCAAAGTACAACTTTGTGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR GCA 90 bp TTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTCAATACCTTCTTCATCACTGCTaGTCCAGGCATCTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LKVETSRLIVQQVRESQYLLHHC*SRHLQR
Trigger: CCTTTGAAGATGCCTGGAGCAGCAGTGATGAAGAAG...GTATTGACTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR GCA 90 bp AGACTTCAAGTCACAAAGTTGTACTTTGGGTCCTCTAGTACCAACTGCTACCAAATCCTTCTTCATCACTaGTGCTCCAGGCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: RLQVTKLYFGSSSTNCYQILLHH*CSRHLQ
Trigger: TTGAAGATGCCTGGAGCAGCAGTGATGAAGAAGGAT...TTGGTAGCAGTTGGTACTAGAGGACCCAAAGTACAACTTTGTGACTTGAAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR GCA 90 bp TCTAGTACCAACTGCTACCAAACAGTGCTTGGTGGAGACTGGAGACATATGATGCGTCAATCCTTAAGTTaGTGTCTCTCTTGTCATTCT +
Preference number: 4 (lower is better)
Translates to: SSTNCYQTVLGGDWRHMMRQSLS*CLSCHS
Trigger: AGAATGACAAGAGAGACAGCAACTTAAGGATTGACG...CATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTGGTACTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
CDS-3UTR GCA 90 bp GAATGTGAGAACAGGATCCAGACTTCAAGTCACAAAGTTGTACTTTGGGTCCTCTTAAGCCAGATTCCCTaGCAGGATATTTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: ECENRIQTSSHKVVLWVLLSQIP*QDIFCL
Trigger: CAAGCAGAAAATATCCTGGCAGGGAATCTGGCTTAA...GAGGACCCAAAGTACAACTTTGTGACTTGAAGTCTGGATCCTGTTCTCACATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
CDS-3UTR GCA 90 bp CTTCATCACTGCTGCTCCAGGCATCTTCAAAGGCCGGATTTAATTGTGATTTTGTTAAGCCAGATTCCCTaGCAGGATATTTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LHHCCSRHLQRPDLIVILLSQIP*QDIFCL
Trigger: CAAGCAGAAAATATCCTGGCAGGGAATCTGGCTTAA...CAAAATCACAATTAAATCCGGCCTTTGAAGATGCCTGGAGCAGCAGTGATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000675378.1
CDS-3UTR GCA 90 bp TTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGAGAGCCAATAAATTGTTaGCTTAAAGAGCTGACTACA +
Preference number: 4 (lower is better)
Translates to: LCYLYCSNEGFPRPQHLGEPINC*LKELTT
Trigger: TGTAGTCAGCTCTTTAAGGCAACAATTTATTGGCTC...TCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR CCA 90 bp ATTTGGTCATACCTTAATGAGTTTCACAGAAAAAGAGTTCAAGCATTAGCGCAATCCTCCAAACCCGTTTaGCGTGCGGACAAAAACCCC +
Preference number: 4 (lower is better)
Translates to: IWSYLNEFHRKRVQALAQSSKPV*RADKNP
Trigger: GGGGTTTTTGTCCGCACGCCAAACGGGTTTGGAGGA...TTGCGCTAATGCTTGAACTCTTTTTCTGTGAAACTCATTAAGGTATGACCAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CCA 90 bp TGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACAAATAAGATTGTCTGCTaGAGTTCTCAAGGTCATAAA +
Preference number: 4 (lower is better)
Translates to: CTVAMRAFPGHNIWDQGTNKIVC*SSQGHK
Trigger: TTTATGACCTTGAGAACTCCAGCAGACAATCTTATT...TGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CCA 90 bp CTTCATCACTGCTGCTCCAGGCATCTTCAAAGGCCGGATTTAATTGTGATTTTGGATGATCTCTGCCAATaGAACACACTGCTTTACATG +
Preference number: 4 (lower is better)
Translates to: LHHCCSRHLQRPDLIVILDDLCQ*NTLLYM
Trigger: CATGTAAAGCAGTGTGTTCCATTGGCAGAGATCATC...CAAAATCACAATTAAATCCGGCCTTTGAAGATGCCTGGAGCAGCAGTGATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR CCA 90 bp AAGTCACAAAGTTGTACTTTGGGTCCTCTAGTACCAACTGCTACCAAACAGTGCGTGCTTGGTGGAGACTaGAGACATATGATGACTATA +
Preference number: 4 (lower is better)
Translates to: KSQSCTLGPLVPTATKQCVLGGD*RHMMTI
Trigger: TATAGTCATCATATGTCTCCAGTCTCCACCAAGCAC...GCACTGTTTGGTAGCAGTTGGTACTAGAGGACCCAAAGTACAACTTTGTGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CCA 90 bp ATTGGAACTATTCCAGAGCCTCATTCGATTATCTGTACCAACAGTGAGGAGGTGGTGCTTGGTGGAGACTaGAGACATATGATGACTATA +
Preference number: 4 (lower is better)
Translates to: IGTIPEPHSIICTNSEEVVLGGD*RHMMTI
Trigger: TATAGTCATCATATGTCTCCAGTCTCCACCAAGCAC...CACCTCCTCACTGTTGGTACAGATAATCGAATGAGGCTCTGGAATAGTTCCAAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CCA 90 bp GTCTCATCATCATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGGTGCTTGGTGGAGACTaGAGACATATGATGACTATA +
Preference number: 4 (lower is better)
Translates to: VSSSSGTGSYKDGTQARMVLGGD*RHMMTI
Trigger: TATAGTCATCATATGTCTCCAGTCTCCACCAAGCAC...CATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATGATGATGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR CCA 90 bp TCATCACTGCTGCTCCAGGCATCTTCAAAGGCCGGATTTAATTGTGATTTTGTTCCAAACAGTGCTTGGTaGAGACTGGAGACATATGAT +
Preference number: 4 (lower is better)
Translates to: SSLLLQASSKAGFNCDFVPNSAW*RLETYD
Trigger: ATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGG...AACAAAATCACAATTAAATCCGGCCTTTGAAGATGCCTGGAGCAGCAGTGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR CCA 90 bp GTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTCTGTATAAACAGCAATaGTGCTACCATATGGTACAA +
Preference number: 4 (lower is better)
Translates to: VAMRAFPGHNIWDQGTHFLYKQQ*CYHMVQ
Trigger: TTGTACCATATGGTAGCACCATTGCTGTTTATACAG...AAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CCA 90 bp TTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGACTGTATAAACAGCAATaGTGCTACCATATGGTACAA +
Preference number: 4 (lower is better)
Translates to: LCYLYCSNEGFPRPQHLGLYKQQ*CYHMVQ
Trigger: TTGTACCATATGGTAGCACCATTGCTGTTTATACAG...TCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CCA 90 bp GTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAATTAGTACAGCCATTATaGAAGACAGTATGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: VTCTVAMRAFPGHNIWDQLVQPL*KTVWSF
Trigger: GAAACTCCATACTGTCTTCCATAATGGCTGTACTAA...TTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR CCA 90 bp ATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGCAGTCAAGAGGACATTaGGCACCTGAAAAGTCCTAC +
Preference number: 4 (lower is better)
Translates to: IILKGGNEQADSTASKRKQSRGH*APEKSY
Trigger: GTAGGACTTTTCAGGTGCCCAATGTCCTCTTGACTG...CTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR CAA 72 bp AATGTGAGAACAGGATCCAGACTTCAAGTCACAAAGTaGTACTTTGGGTCCTCTAGTACCAACTGCTACCAA +
Preference number: 4 (lower is better)
Translates to: NVRTGSRLQVTK*YFGSSSTNCYQ
Trigger: TTGGTAGCAGTTGGTACTAGAGGACCCAAAGTACAACTTTGTGACTTGAAGTCTGGATCCTGTTCTCACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
ENST00000647431.1
CDS-3UTR TCA 90 bp TTTTCTCCATTGGAACTATTCCAGAGCCTCATTCGATTATCTGTACCAACAGTGCAAATGAGCTTGATGTaGACATGCCAGTGTCATGAG +
Preference number: 4 (lower is better)
Translates to: FSPLELFQSLIRLSVPTVQMSLM*TCQCHE
Trigger: CTCATGACACTGGCATGTTCACATCAAGCTCATTTG...CACTGTTGGTACAGATAATCGAATGAGGCTCTGGAATAGTTCCAATGGAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR TCA 90 bp GATCTTTATTTCCCTGCTGAGTCTCAACAACCAGCACAAAGTACATTAGTCATGCAAATGAGCTTGATGTaGACATGCCAGTGTCATGAG +
Preference number: 4 (lower is better)
Translates to: DLYFPAESQQPAQSTLVMQMSLM*TCQCHE
Trigger: CTCATGACACTGGCATGTTCACATCAAGCTCATTTG...CATGACTAATGTACTTTGTGCTGGTTGTTGAGACTCAGCAGGGAAATAAAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497892.6
ENST00000675229.1
CDS-3UTR TCA 90 bp TACAACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAATTAACTTTCCCATTATaGGCAGTGTTTGCTGATTCA +
Preference number: 4 (lower is better)
Translates to: YNDLCYLYCSNEGFPRPQLTFPL*AVFADS
Trigger: TGAATCAGCAAACACTGCTCATAATGGGAAAGTTAA...TTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp ATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGCCAACAGTGAGGAGGTaGAGTCCATCACTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: IILKGGNEQADSTASKRKPTVRR*SPSLVK
Trigger: TTTTACAAGTGATGGACTTCACCTCCTCACTGTTGG...CTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp TACCAAACAGTGCTTGGTGGAGACTGGAGACATATGATGACTATAAACTGTTTCCCAACAGTGAGGAGGTaGAGTCCATCACTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: YQTVLGGDWRHMMTINCFPTVRR*SPSLVK
Trigger: TTTTACAAGTGATGGACTTCACCTCCTCACTGTTGG...GAAACAGTTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR TCA 90 bp GTCTCATCATCATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTCCTGGAAATTTGACTaGAATACACAGCAGTCAACA +
Preference number: 4 (lower is better)
Translates to: VSSSSGTGSYKDGTQARMSWKFD*NTQQST
Trigger: TGTTGACTGCTGTGTATTTCAGTCAAATTTCCAGGA...CATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATGATGATGAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR TCA 90 bp GATTTTGTTGTAGTCTCATCATCATCAGGAACTGGTTCATATAAGGATGGAACCGCTGAAGGTCACAACTaGGGTACAACGACTTGTGTT +
Preference number: 4 (lower is better)
Translates to: DFVVVSSSSGTGSYKDGTAEGHN*GTTTCV
Trigger: AACACAAGTCGTTGTACCTCAGTTGTGACCTTCAGC...GGTTCCATCCTTATATGAACCAGTTCCTGATGATGATGAGACTACAACAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR TCA 90 bp TCATCATCATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTGGTTCATAAAATCTGCTaGAGGTCACAACTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: SSSSGTGSYKDGTQARMLVHKIC*RSQLRY
Trigger: GTACCTCAGTTGTGACCTTCAGCAGATTTTATGAAC...CAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATGATGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR TCA 90 bp ATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGAGAGAAAGTCAATACTaGTGGCCTCCACTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: IILKGGNEQADSTASKRKRESQY*WPPLAD
Trigger: ATCAGCAAGTGGAGGCCATCAGTATTGACTTTCTCT...CTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp CTTCATCACTGCTGCTCCAGGCATCTTCAAAGGCCGGATTTAATTGTGATTTTGGTTAAAAGCCTCCTGTaGTGCACATTTTGGATAGTA +
Preference number: 4 (lower is better)
Translates to: LHHCCSRHLQRPDLIVILVKSLL*CTFWIV
Trigger: TACTATCCAAAATGTGCATCACAGGAGGCTTTTAAC...CAAAATCACAATTAAATCCGGCCTTTGAAGATGCCTGGAGCAGCAGTGATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR TCA 90 bp GAATGTGAGAACAGGATCCAGACTTCAAGTCACAAAGTTGTACTTTGGGTCCTCCGTCCTTTTTGTATCTaGAATCAGTTTGGCTGGATA +
Preference number: 4 (lower is better)
Translates to: ECENRIQTSSHKVVLWVLRPFCI*NQFGWI
Trigger: TATCCAGCCAAACTGATTTCAGATACAAAAAGGACG...GAGGACCCAAAGTACAACTTTGTGACTTGAAGTCTGGATCCTGTTCTCACATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381118.7
CDS-3UTR TCA 90 bp GATCTTTATTTCCCTGCTGAGTCTCAACAACCAGCACAAAGTACATTAGTCATGATACCCTGTAGAATGTaGGAACAGGATCCAGACTTC +
Preference number: 4 (lower is better)
Translates to: DLYFPAESQQPAQSTLVMIPCRM*EQDPDF
Trigger: GAAGTCTGGATCCTGTTCTCACATTCTACAGGGTAT...CATGACTAATGTACTTTGTGCTGGTTGTTGAGACTCAGCAGGGAAATAAAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497892.6
ENST00000675229.1
CDS-3UTR TCA 90 bp CAGAAGAGCATGAACTCGGAGAGCGGTTATCAATCCACTAGCACAAAGTTTACCAGAAGAAAATATACCTaGGCTGAGAAAAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: QKSMNSESGYQSTSTKFTRRKYT*AEKRFG
Trigger: TCCAAACCTTTTCTCAGCTCAGGTATATTTTCTTCT...GGTAAACTTTGTGCTAGTGGATTGATAACCGCTCTCCGAGTTCATGCTCTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR TCA 90 bp GTCTCATCATCATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGCATCTGCTCCATTGGTaGTATGAAAAGATCTGGAAA +
Preference number: 4 (lower is better)
Translates to: VSSSSGTGSYKDGTQARMHLLHW*YEKIWK
Trigger: TTTCCAGATCTTTTCATATCACCAATGGAGCAGATG...CATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATGATGATGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675378.1
CDS-3UTR GCA 90 bp TACCAAACAGTGCTTGGTGGAGACTGGAGACATATGATGACTATAAACTGTTTCCATCAGGATGATCTCTaGCAATGGAACACACTGCTT +
Preference number: 4 (lower is better)
Translates to: YQTVLGGDWRHMMTINCFHQDDL*QWNTLL
Trigger: AAGCAGTGTGTTCCATTGGCAGAGATCATCCTGATG...GAAACAGTTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR GCA 90 bp GATCTTTATTTCCCTGCTGAGTCTCAACAACCAGCACAAAGTACATTAGTCATGCATCAGGATGATCTCTaGCAATGGAACACACTGCTT +
Preference number: 4 (lower is better)
Translates to: DLYFPAESQQPAQSTLVMHQDDL*QWNTLL
Trigger: AAGCAGTGTGTTCCATTGGCAGAGATCATCCTGATG...CATGACTAATGTACTTTGTGCTGGTTGTTGAGACTCAGCAGGGAAATAAAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497892.6
ENST00000675229.1
CDS-3UTR GCA 90 bp TTTGTTGTAGTCTCATCATCATCAGGAACTGGTTCATATAAGGATGGAACCCAACCCAAGCCAGAATGTTaGAGTCTCTGCTACCACTAT +
Preference number: 4 (lower is better)
Translates to: FVVVSSSSGTGSYKDGTQPKPEC*SLCYHY
Trigger: ATAGTGGTAGCAGAGACTGCAACATTCTGGCTTGGG...TTGGGTTCCATCCTTATATGAACCAGTTCCTGATGATGATGAGACTACAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR GCA 90 bp AGATATAGTCATAACGTGGAGACCAGGAAACTGCTAATATTTCTTGTCTGTGACCCCAAGCCAGAATGTTaGAGTCTCTGCTACCACTAT +
Preference number: 4 (lower is better)
Translates to: RYSHNVETRKLLIFLVCDPKPEC*SLCYHY
Trigger: ATAGTGGTAGCAGAGACTGCAACATTCTGGCTTGGG...GTCACAGACAAGAAATATTAGCAGTTTCCTGGTCTCCACGTTATGACTATATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR GCA 90 bp GATTTTGTTGTAGTCTCATCATCATCAGGAACTGGTTCATATAAGGATGGAACCCTTCTTCATCACTGCTaGTCCAGGCATCTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: DFVVVSSSSGTGSYKDGTLLHHC*SRHLQR
Trigger: CCTTTGAAGATGCCTGGAGCAGCAGTGATGAAGAAG...GGTTCCATCCTTATATGAACCAGTTCCTGATGATGATGAGACTACAACAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR GCA 90 bp GCAAAATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAATCCTTCTTCATCACTaGTGCTCCAGGCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: AKSFLKVETSRLIVQQVRILLHH*CSRHLQ
Trigger: TTGAAGATGCCTGGAGCAGCAGTGATGAAGAAGGAT...TCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGATTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR GCA 90 bp TCAAACATCCTGATGCTCTTCTCACATCCCATAATTTTACTCTACTGTCAGCACATCCTTCTTCATCACTaGTGCTCCAGGCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: SNILMLFSHPIILLYCQHILLHH*CSRHLQ
Trigger: TTGAAGATGCCTGGAGCAGCAGTGATGAAGAAGGAT...GTGCTGACAGTAGAGTAAAATTATGGGATGTGAGAAGAGCATCAGGATGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR GCA 90 bp ATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGATCCTTCTTCATCACTaGTGCTCCAGGCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: IILKGGNEQADSTASKRKILLHH*CSRHLQ
Trigger: TTGAAGATGCCTGGAGCAGCAGTGATGAAGAAGGAT...CTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR GCA 90 bp GAATGTGAGAACAGGATCCAGACTTCAAGTCACAAAGTTGTACTTTGGGTCCTCCGTCAATCCTTAAGTTaGTGTCTCTCTTGTCATTCT +
Preference number: 4 (lower is better)
Translates to: ECENRIQTSSHKVVLWVLRQSLS*CLSCHS
Trigger: AGAATGACAAGAGAGACAGCAACTTAAGGATTGACG...GAGGACCCAAAGTACAACTTTGTGACTTGAAGTCTGGATCCTGTTCTCACATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
CDS-3UTR GCA 90 bp CAGAAGAGCATGAACTCGGAGAGCGGTTATCAATCCACTAGCACAAAGTTTACCTCTCAAAAGAAGACATaGAAATGGCCAGCAGATATA +
Preference number: 4 (lower is better)
Translates to: QKSMNSESGYQSTSTKFTSQKKT*KWPADI
Trigger: TATATCTGCTGGCCATTTGCATGTCTTCTTTTGAGA...GGTAAACTTTGTGCTAGTGGATTGATAACCGCTCTCCGAGTTCATGCTCTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR GCA 90 bp TACAACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAAAGTAAAACAGTTACTTaGAGTTTGGAAGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: YNDLCYLYCSNEGFPRPQSKTVT*SLEADF
Trigger: GAAGTCTGCTTCCAAACTGCAAGTAACTGTTTTACT...TTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR CCA 90 bp CAACTGCTACCAAACAGTGCTTGGTGGAGACTGGAGACATATGATGACTATAAATTAATTCCACCGCCGTaGATTCTTTCAACATCTCTG +
Preference number: 4 (lower is better)
Translates to: QLLPNSAWWRLETYDDYKLIPPP*ILSTSL
Trigger: CAGAGATGTTGAAAGAATCCACGGCGGTGGAATTAA...TTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CCA 90 bp TGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAATAAGATTGTCTGCTaGAGTTCTCAAGGTCATAAA +
Preference number: 4 (lower is better)
Translates to: CYLYCSNEGFPRPQHLGSNKIVC*SSQGHK
Trigger: TTTATGACCTTGAGAACTCCAGCAGACAATCTTATT...TGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CCA 90 bp GATCTTTATTTCCCTGCTGAGTCTCAACAACCAGCACAAAGTACATTAGTCATGCCAAACAGTGCTTGGTaGAGACTGGAGACATATGAT +
Preference number: 4 (lower is better)
Translates to: DLYFPAESQQPAQSTLVMPNSAW*RLETYD
Trigger: ATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGG...CATGACTAATGTACTTTGTGCTGGTTGTTGAGACTCAGCAGGGAAATAAAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497892.6
ENST00000675229.1
CDS-3UTR CCA 90 bp ATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGCCAAACAGTGCTTGGTaGAGACTGGAGACATATGAT +
Preference number: 4 (lower is better)
Translates to: IILKGGNEQADSTASKRKPNSAW*RLETYD
Trigger: ATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGG...CTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CCA 90 bp GATCTTTATTTCCCTGCTGAGTCTCAACAACCAGCACAAAGTACATTAGTCATGCTACCAAACAGTGCTTaGTGGAGACTGGAGACATAT +
Preference number: 4 (lower is better)
Translates to: DLYFPAESQQPAQSTLVMLPNSA*WRLETY
Trigger: ATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAG...CATGACTAATGTACTTTGTGCTGGTTGTTGAGACTCAGCAGGGAAATAAAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497892.6
ENST00000675229.1
CDS-3UTR CCA 90 bp TTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTCAATACCTACCAAACAGTGCTTaGTGGAGACTGGAGACATAT +
Preference number: 4 (lower is better)
Translates to: LKVETSRLIVQQVRESQYLPNSA*WRLETY
Trigger: ATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAG...GTATTGACTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CCA 90 bp TTTTCTCCATTGGAACTATTCCAGAGCCTCATTCGATTATCTGTACCAACAGTGCCAGGCCACAACATCTaGGATCAAGGAACACATTTT +
Preference number: 4 (lower is better)
Translates to: FSPLELFQSLIRLSVPTVPGHNI*DQGTHF
Trigger: AAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGG...CACTGTTGGTACAGATAATCGAATGAGGCTCTGGAATAGTTCCAATGGAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CCA 90 bp ATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGCCAGGCCACAACATCTaGGATCAAGGAACACATTTT +
Preference number: 4 (lower is better)
Translates to: IILKGGNEQADSTASKRKPGHNI*DQGTHF
Trigger: AAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGG...CTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CCA 90 bp CAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTGCAGTCTCTGCTCTCTCTTGTCATTCTaGTTGAATGATTTCATTCTC +
Preference number: 4 (lower is better)
Translates to: QELVHIRMEPKPECCSLCSLLSF*LNDFIL
Trigger: GAGAATGAAATCATTCAACCAGAATGACAAGAGAGA...GCAGAGACTGCAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
CDS-3UTR TCA 90 bp CATCATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTGCAGTTTAACTTTCCCATTATaGGCAGTGTTTGCTGATTCA +
Preference number: 4 (lower is better)
Translates to: HHQELVHIRMEPKPECCSLTFPL*AVFADS
Trigger: TGAATCAGCAAACACTGCTCATAATGGGAAAGTTAA...ACTGCAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR TCA 90 bp GTGTGTTTTCTCCATTGGAACTATTCCAGAGCCTCATTCGATTATCTGTACCAATACAAAAACAAATTCTaGACTGCAGCCACAGGAGAC +
Preference number: 4 (lower is better)
Translates to: VCFLHWNYSRASFDYLYQYKNKF*TAATGD
Trigger: GTCTCCTGTGGCTGCAGTTCAGAATTTGTTTTTGTA...TTGGTACAGATAATCGAATGAGGCTCTGGAATAGTTCCAATGGAGAAAACACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR TCA 90 bp TACTGTCAGCACTTGCTGTTGCCAAGATATAGTCATAACGTGGAGACCAGGAAAATTTCATTCTCTGGTTaGTTCTATCTCCCTTCAACA +
Preference number: 4 (lower is better)
Translates to: YCQHLLLPRYSHNVETRKISFSG*FYLPST
Trigger: TGTTGAAGGGAGATAGAATCAACCAGAGAATGAAAT...TTTCCTGGTCTCCACGTTATGACTATATCTTGGCAACAGCAAGTGCTGACAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643034.1
CDS-3UTR TCA 90 bp ATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTTACACAATAGTGGATaGTACCATCATGCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: IILKGGNEQADSTASKRKLHNSG*YHHAGC
Trigger: ACACCCTGCATGATGGTATCATCCACTATTGTGTAA...CTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR GCA 90 bp GTCTCATCATCATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTGTAATAAGATTGTCTaGTGGAGTTCTCAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: VSSSSGTGSYKDGTQARMCNKIV*WSSQGH
Trigger: ATGACCTTGAGAACTCCAGCAGACAATCTTATTACA...CATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATGATGATGAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR GCA 90 bp TCTTCATCACTGCTGCTCCAGGCATCTTCAAAGGCCGGATTTAATTGTGATTTTGAATGTTGCAGTCTCTaGTACCACTATAAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: SSSLLLQASSKAGFNCDFECCSL*YHYKVP
Trigger: AGGAACTTTATAGTGGTAGCAGAGACTGCAACATTC...AAAATCACAATTAAATCCGGCCTTTGAAGATGCCTGGAGCAGCAGTGATGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR GCA 90 bp AACAGAAGAACTAGCACTATCCTGAGCCCTAGATTTAACCTTCCGATGTCCAGACAGTCACCAGGGAAATaGAAATTAAAACAACGAGAT +
Preference number: 4 (lower is better)
Translates to: NRRTSTILSPRFNLPMSRQSPGK*KLKQRD
Trigger: ATCTCGTTGTTTTAATTTGCATTTCCCTGGTGACTG...TCTGGACATCGGAAGGTTAAATCTAGGGCTCAGGATAGTGCTAGTTCTTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR GCA 90 bp TCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTGCAGCAAAAGAAGTATaGCTTCTGTATCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: SFLKVETSRLIVQQVRESAAKEV*LLYLRM
Trigger: CATCCTCAGATACAGAAGGCATACTTCTTTTGCTGC...ACTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR CCA 90 bp GCAAAATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGATTAATTCCACCGCCGTaGATTCTTTCAACATCTCTG +
Preference number: 4 (lower is better)
Translates to: AKSFLKVETSRLIVQQVRLIPPP*ILSTSL
Trigger: CAGAGATGTTGAAAGAATCCACGGCGGTGGAATTAA...TCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGATTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CCA 90 bp GATCTTTATTTCCCTGCTGAGTCTCAACAACCAGCACAAAGTACATTAGTCATGTTAATTCCACCGCCGTaGATTCTTTCAACATCTCTG +
Preference number: 4 (lower is better)
Translates to: DLYFPAESQQPAQSTLVMLIPPP*ILSTSL
Trigger: CAGAGATGTTGAAAGAATCCACGGCGGTGGAATTAA...CATGACTAATGTACTTTGTGCTGGTTGTTGAGACTCAGCAGGGAAATAAAGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497892.6
ENST00000675229.1
CDS-3UTR CCA 90 bp TCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTGATGATCTCTGCCAATaGAACACACTGCTTTACATG +
Preference number: 4 (lower is better)
Translates to: SFLKVETSRLIVQQVRESDDLCQ*NTLLYM
Trigger: CATGTAAAGCAGTGTGTTCCATTGGCAGAGATCATC...ACTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CCA 90 bp GCAAAATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGATGATCTCTGCCAATaGAACACACTGCTTTACATG +
Preference number: 4 (lower is better)
Translates to: AKSFLKVETSRLIVQQVRDDLCQ*NTLLYM
Trigger: CATGTAAAGCAGTGTGTTCCATTGGCAGAGATCATC...TCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGATTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CCA 90 bp AACAGTGCTTGGTGGAGACTGGAGACATATGATGACTATAAACTGTTTCCTCAAGATGATCTCTGCCAATaGAACACACTGCTTTACATG +
Preference number: 4 (lower is better)
Translates to: NSAWWRLETYDDYKLFPQDDLCQ*NTLLYM
Trigger: CATGTAAAGCAGTGTGTTCCATTGGCAGAGATCATC...TTGAGGAAACAGTTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CCA 90 bp GATCTTTATTTCCCTGCTGAGTCTCAACAACCAGCACAAAGTACATTAGTCATGGATGATCTCTGCCAATaGAACACACTGCTTTACATG +
Preference number: 4 (lower is better)
Translates to: DLYFPAESQQPAQSTLVMDDLCQ*NTLLYM
Trigger: CATGTAAAGCAGTGTGTTCCATTGGCAGAGATCATC...CATGACTAATGTACTTTGTGCTGGTTGTTGAGACTCAGCAGGGAAATAAAGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497892.6
ENST00000675229.1
CDS-3UTR CCA 90 bp GATCTTTATTTCCCTGCTGAGTCTCAACAACCAGCACAAAGTACATTAGTCATGGTGCTTGGTGGAGACTaGAGACATATGATGACTATA +
Preference number: 4 (lower is better)
Translates to: DLYFPAESQQPAQSTLVMVLGGD*RHMMTI
Trigger: TATAGTCATCATATGTCTCCAGTCTCCACCAAGCAC...CATGACTAATGTACTTTGTGCTGGTTGTTGAGACTCAGCAGGGAAATAAAGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497892.6
ENST00000675229.1
CDS-3UTR CCA 90 bp ATCAAACATCCTGATGCTCTTCTCACATCCCATAATTTTACTCTACTGTCAGCACCAAACAGTGCTTGGTaGAGACTGGAGACATATGAT +
Preference number: 4 (lower is better)
Translates to: IKHPDALLTSHNFTLLSAPNSAW*RLETYD
Trigger: ATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGG...TGCTGACAGTAGAGTAAAATTATGGGATGTGAGAAGAGCATCAGGATGTTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CCA 90 bp TTTGTTGTAGTCTCATCATCATCAGGAACTGGTTCATATAAGGATGGAACCCAACTACCAAACAGTGCTTaGTGGAGACTGGAGACATAT +
Preference number: 4 (lower is better)
Translates to: FVVVSSSSGTGSYKDGTQLPNSA*WRLETY
Trigger: ATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAG...TTGGGTTCCATCCTTATATGAACCAGTTCCTGATGATGATGAGACTACAACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR CCA 90 bp CATCATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTGCAGTCTGTATAAACAGCAATaGTGCTACCATATGGTACAA +
Preference number: 4 (lower is better)
Translates to: HHQELVHIRMEPKPECCSLYKQQ*CYHMVQ
Trigger: TTGTACCATATGGTAGCACCATTGCTGTTTATACAG...ACTGCAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR CCA 90 bp AACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATAATGATTTCATTCTCTaGTTGATTCCTAAGGAATGG +
Preference number: 4 (lower is better)
Translates to: NDLCYLYCSNEGFPRPQHNDFIL*LIPKEW
Trigger: CCATTCCTTAGGAATCAACCAGAGAATGAAATCATT...ATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381118.7
CDS-3UTR TCA 90 bp AGAGTAATCAAACATCCTGATGCTCTTCTCACATCCCATAATTTTACTCTACTGCAAATGAGCTTGATGTaGACATGCCAGTGTCATGAG +
Preference number: 4 (lower is better)
Translates to: RVIKHPDALLTSHNFTLLQMSLM*TCQCHE
Trigger: CTCATGACACTGGCATGTTCACATCAAGCTCATTTG...CAGTAGAGTAAAATTATGGGATGTGAGAAGAGCATCAGGATGTTTGATTACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR TCA 90 bp ATCAAACATCCTGATGCTCTTCTCACATCCCATAATTTTACTCTACTGTCAGCAAGTAATCAAACATCCTaGTGCTCTTCTCACATCCCA +
Preference number: 4 (lower is better)
Translates to: IKHPDALLTSHNFTLLSASNQTS*CSSHIP
Trigger: TGGGATGTGAGAAGAGCATCAGGATGTTTGATTACT...TGCTGACAGTAGAGTAAAATTATGGGATGTGAGAAGAGCATCAGGATGTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR TCA 90 bp ATTTGGTCATACCTTAATGAGTTTCACAGAAAAAGAGTTCAAGCATTAGCGCAATATCTGTACCAACAGTaGGGAGGTGAAGTCCATCAC +
Preference number: 4 (lower is better)
Translates to: IWSYLNEFHRKRVQALAQYLYQQ*GGEVHH
Trigger: GTGATGGACTTCACCTCCTCACTGTTGGTACAGATA...TTGCGCTAATGCTTGAACTCTTTTTCTGTGAAACTCATTAAGGTATGACCAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp TTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTCAATACTCCTGGAAATTTGACTaGAATACACAGCAGTCAACA +
Preference number: 4 (lower is better)
Translates to: LKVETSRLIVQQVRESQYSWKFD*NTQQST
Trigger: TGTTGACTGCTGTGTATTTCAGTCAAATTTCCAGGA...GTATTGACTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000676185.1
CDS-3UTR TCA 90 bp TTTGTTGTAGTCTCATCATCATCAGGAACTGGTTCATATAAGGATGGAACCCAAGTTCATAAAATCTGCTaGAGGTCACAACTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: FVVVSSSSGTGSYKDGTQVHKIC*RSQLRY
Trigger: GTACCTCAGTTGTGACCTTCAGCAGATTTTATGAAC...TTGGGTTCCATCCTTATATGAACCAGTTCCTGATGATGATGAGACTACAACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR TCA 90 bp TTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTCAATACGATAGTAGGAGACATTaGGCCCCAAAATGTTTAACA +
Preference number: 4 (lower is better)
Translates to: LKVETSRLIVQQVRESQYDSRRH*APKCLT
Trigger: TGTTAAACATTTTGGGGCTCAATGTCTCCTACTATC...GTATTGACTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp TACCAAACAGTGCTTGGTGGAGACTGGAGACATATGATGACTATAAACTGTTTCGATAGTAGGAGACATTaGGCCCCAAAATGTTTAACA +
Preference number: 4 (lower is better)
Translates to: YQTVLGGDWRHMMTINCFDSRRH*APKCLT
Trigger: TGTTAAACATTTTGGGGCTCAATGTCTCCTACTATC...GAAACAGTTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR TCA 90 bp TTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTCAATACGTTAAAAGCCTCCTGTaGTGCACATTTTGGATAGTA +
Preference number: 4 (lower is better)
Translates to: LKVETSRLIVQQVRESQYVKSLL*CTFWIV
Trigger: TACTATCCAAAATGTGCATCACAGGAGGCTTTTAAC...GTATTGACTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp AACAGTGCTTGGTGGAGACTGGAGACATATGATGACTATAAACTGTTTCCTCAAGTTAAAAGCCTCCTGTaGTGCACATTTTGGATAGTA +
Preference number: 4 (lower is better)
Translates to: NSAWWRLETYDDYKLFPQVKSLL*CTFWIV
Trigger: TACTATCCAAAATGTGCATCACAGGAGGCTTTTAAC...TTGAGGAAACAGTTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR TCA 90 bp ATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGGTTAAAAGCCTCCTGTaGTGCACATTTTGGATAGTA +
Preference number: 4 (lower is better)
Translates to: IILKGGNEQADSTASKRKVKSLL*CTFWIV
Trigger: TACTATCCAAAATGTGCATCACAGGAGGCTTTTAAC...CTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp ATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGAAAATATACCTGAGCTaGGAAAAGGTTTGGACCTTC +
Preference number: 4 (lower is better)
Translates to: IILKGGNEQADSTASKRKKIYLS*EKVWTF
Trigger: GAAGGTCCAAACCTTTTCTCAGCTCAGGTATATTTT...CTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR GCA 90 bp AGACTTCAAGTCACAAAGTTGTACTTTGGGTCCTCTAGTACCAACTGCTACCAATGTAATAAGATTGTCTaGTGGAGTTCTCAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: RLQVTKLYFGSSSTNCYQCNKIV*WSSQGH
Trigger: ATGACCTTGAGAACTCCAGCAGACAATCTTATTACA...TTGGTAGCAGTTGGTACTAGAGGACCCAAAGTACAACTTTGTGACTTGAAGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR GCA 90 bp CAACTGCTACCAAACAGTGCTTGGTGGAGACTGGAGACATATGATGACTATAAAGCCAATGGAACACACTaGTTTACATGTGTAATAAGA +
Preference number: 4 (lower is better)
Translates to: QLLPNSAWWRLETYDDYKANGTH*FTCVIR
Trigger: TCTTATTACACATGTAAAGCAGTGTGTTCCATTGGC...TTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR GCA 90 bp TCATCACTGCTGCTCCAGGCATCTTCAAAGGCCGGATTTAATTGTGATTTTGTTGCCAATGGAACACACTaGTTTACATGTGTAATAAGA +
Preference number: 4 (lower is better)
Translates to: SSLLLQASSKAGFNCDFVANGTH*FTCVIR
Trigger: TCTTATTACACATGTAAAGCAGTGTGTTCCATTGGC...AACAAAATCACAATTAAATCCGGCCTTTGAAGATGCCTGGAGCAGCAGTGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR GCA 90 bp AGTGCTTGGTGGAGACTGGAGACATATGATGACTATAAACTGTTTCCTCAAAATGTCAGCACTTGCTGTTaGCAAGATATAGTCATAACG +
Preference number: 4 (lower is better)
Translates to: SAWWRLETYDDYKLFPQNVSTCC*QDIVIT
Trigger: CGTTATGACTATATCTTGGCAACAGCAAGTGCTGAC...ATTTTGAGGAAACAGTTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR GCA 90 bp TTTTCTCCATTGGAACTATTCCAGAGCCTCATTCGATTATCTGTACCAACAGTGGAATGTTGCAGTCTCTaGTACCACTATAAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: FSPLELFQSLIRLSVPTVECCSL*YHYKVP
Trigger: AGGAACTTTATAGTGGTAGCAGAGACTGCAACATTC...CACTGTTGGTACAGATAATCGAATGAGGCTCTGGAATAGTTCCAATGGAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CCA 90 bp GAATGTGAGAACAGGATCCAGACTTCAAGTCACAAAGTTGTACTTTGGGTCCTCAATAAGATTGTCTGCTaGAGTTCTCAAGGTCATAAA +
Preference number: 4 (lower is better)
Translates to: ECENRIQTSSHKVVLWVLNKIVC*SSQGHK
Trigger: TTTATGACCTTGAGAACTCCAGCAGACAATCTTATT...GAGGACCCAAAGTACAACTTTGTGACTTGAAGTCTGGATCCTGTTCTCACATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CCA 90 bp TTTGTTGTAGTCTCATCATCATCAGGAACTGGTTCATATAAGGATGGAACCCAAGATGATCTCTGCCAATaGAACACACTGCTTTACATG +
Preference number: 4 (lower is better)
Translates to: FVVVSSSSGTGSYKDGTQDDLCQ*NTLLYM
Trigger: CATGTAAAGCAGTGTGTTCCATTGGCAGAGATCATC...TTGGGTTCCATCCTTATATGAACCAGTTCCTGATGATGATGAGACTACAACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR CCA 90 bp GAATGTGAGAACAGGATCCAGACTTCAAGTCACAAAGTTGTACTTTGGGTCCTCTCTCTCTTGTCATTCTaGTTGAATGATTTCATTCTC +
Preference number: 4 (lower is better)
Translates to: ECENRIQTSSHKVVLWVLSLLSF*LNDFIL
Trigger: GAGAATGAAATCATTCAACCAGAATGACAAGAGAGA...GAGGACCCAAAGTACAACTTTGTGACTTGAAGTCTGGATCCTGTTCTCACATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
CDS-3UTR CCA 90 bp AAGTCACAAAGTTGTACTTTGGGTCCTCTAGTACCAACTGCTACCAAACAGTGCTCTCTCTTGTCATTCTaGTTGAATGATTTCATTCTC +
Preference number: 4 (lower is better)
Translates to: KSQSCTLGPLVPTATKQCSLLSF*LNDFIL
Trigger: GAGAATGAAATCATTCAACCAGAATGACAAGAGAGA...GCACTGTTTGGTAGCAGTTGGTACTAGAGGACCCAAAGTACAACTTTGTGACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
CDS-3UTR CCA 90 bp GTCTCATCATCATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGAATGATTTCATTCTCTaGTTGATTCTATCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: VSSSSGTGSYKDGTQARMNDFIL*LILSPF
Trigger: GAAGGGAGATAGAATCAACCAGAGAATGAAATCATT...CATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATGATGATGAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643034.1
CDS-3UTR CCA 90 bp TCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTCAGTTACTTGCAGTTTaGAAGCAGACTTCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: SFLKVETSRLIVQQVRESQLLAV*KQTSFF
Trigger: GAAAAAGGAAGTCTGCTTCCAAACTGCAAGTAACTG...ACTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR TCA 90 bp ATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTTAACTTTCCCATTATaGGCAGTGTTTGCTGATTCA +
Preference number: 4 (lower is better)
Translates to: IILKGGNEQADSTASKRKLTFPL*AVFADS
Trigger: TGAATCAGCAAACACTGCTCATAATGGGAAAGTTAA...CTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp TCAAACATCCTGATGCTCTTCTCACATCCCATAATTTTACTCTACTGTCAGCACAGTTATCTGTTCTCCTaGGTAAACTGTATAAACAGC +
Preference number: 4 (lower is better)
Translates to: SNILMLFSHPIILLYCQHSYLFS*VNCINS
Trigger: GCTGTTTATACAGTTTACTCAGGAGAACAGATAACT...GTGCTGACAGTAGAGTAAAATTATGGGATGTGAGAAGAGCATCAGGATGTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR TCA 90 bp ATTTGGTCATACCTTAATGAGTTTCACAGAAAAAGAGTTCAAGCATTAGCGCAAAGAGAAAGTCAATACTaGTGGCCTCCACTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: IWSYLNEFHRKRVQALAQRESQY*WPPLAD
Trigger: ATCAGCAAGTGGAGGCCATCAGTATTGACTTTCTCT...TTGCGCTAATGCTTGAACTCTTTTTCTGTGAAACTCATTAAGGTATGACCAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp ATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGCACATTTTATTTCCTTaGGCATCTTGGATAAGAAGC +
Preference number: 4 (lower is better)
Translates to: IILKGGNEQADSTASKRKHILFP*ASWIRS
Trigger: GCTTCTTATCCAAGATGCTCAAGGAAATAAAATGTG...CTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381118.7
CDS-3UTR TCA 90 bp GATTTTGTTGTAGTCTCATCATCATCAGGAACTGGTTCATATAAGGATGGAACCGAGAACAACAGTCTCTaGATTCTTGTGTTGTTGACA +
Preference number: 4 (lower is better)
Translates to: DFVVVSSSSGTGSYKDGTENNSL*ILVLLT
Trigger: TGTCAACAACACAAGAATTCAGAGACTGTTGTTCTC...GGTTCCATCCTTATATGAACCAGTTCCTGATGATGATGAGACTACAACAAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381118.7
CDS-3UTR TCA 90 bp TTTTCTCCATTGGAACTATTCCAGAGCCTCATTCGATTATCTGTACCAACAGTGGTCATTCTGGTTGAATaGTTTCATTCTCTGGTTGAT +
Preference number: 4 (lower is better)
Translates to: FSPLELFQSLIRLSVPTVVILVE*FHSLVD
Trigger: ATCAACCAGAGAATGAAATCATTCAACCAGAATGAC...CACTGTTGGTACAGATAATCGAATGAGGCTCTGGAATAGTTCCAATGGAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
CDS-3UTR TCA 90 bp GATCTTTATTTCCCTGCTGAGTCTCAACAACCAGCACAAAGTACATTAGTCATGGTCATTCTGGTTGAATaGTTTCATTCTCTGGTTGAT +
Preference number: 4 (lower is better)
Translates to: DLYFPAESQQPAQSTLVMVILVE*FHSLVD
Trigger: ATCAACCAGAGAATGAAATCATTCAACCAGAATGAC...CATGACTAATGTACTTTGTGCTGGTTGTTGAGACTCAGCAGGGAAATAAAGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497892.6
CDS-3UTR TCA 90 bp GCAAAATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGATATCACAGTCAGGCCTaGATTAGTAACCTTGAATAT +
Preference number: 4 (lower is better)
Translates to: AKSFLKVETSRLIVQQVRYHSQA*ISNLEY
Trigger: ATATTCAAGGTTACTAATTCAGGCCTGACTGTGATA...TCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGATTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR TCA 90 bp ATTTGGTCATACCTTAATGAGTTTCACAGAAAAAGAGTTCAAGCATTAGCGCAATATAAGTACCTTAGGTaGCGAAAGGACAGCCAAGAC +
Preference number: 4 (lower is better)
Translates to: IWSYLNEFHRKRVQALAQYKYLR*RKDSQD
Trigger: GTCTTGGCTGTCCTTTCGTCACCTAAGGTACTTATA...TTGCGCTAATGCTTGAACTCTTTTTCTGTGAAACTCATTAAGGTATGACCAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR TCA 90 bp TCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTGGAATCAAAGTGAAGTaGACAAATGGCCTAAGTATT +
Preference number: 4 (lower is better)
Translates to: SFLKVETSRLIVQQVRESGIKVK*TNGLSI
Trigger: AATACTTAGGCCATTTGTTCACTTCACTTTGATTCC...ACTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR GCA 90 bp ATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTGTAATAAGATTGTCTaGTGGAGTTCTCAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: IILKGGNEQADSTASKRKCNKIV*WSSQGH
Trigger: ATGACCTTGAGAACTCCAGCAGACAATCTTATTACA...CTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR GCA 90 bp GATCTTTATTTCCCTGCTGAGTCTCAACAACCAGCACAAAGTACATTAGTCATGTGTAATAAGATTGTCTaGTGGAGTTCTCAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: DLYFPAESQQPAQSTLVMCNKIV*WSSQGH
Trigger: ATGACCTTGAGAACTCCAGCAGACAATCTTATTACA...CATGACTAATGTACTTTGTGCTGGTTGTTGAGACTCAGCAGGGAAATAAAGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497892.6
ENST00000675229.1
CDS-3UTR GCA 90 bp GATCTTTATTTCCCTGCTGAGTCTCAACAACCAGCACAAAGTACATTAGTCATGGCCAATGGAACACACTaGTTTACATGTGTAATAAGA +
Preference number: 4 (lower is better)
Translates to: DLYFPAESQQPAQSTLVMANGTH*FTCVIR
Trigger: TCTTATTACACATGTAAAGCAGTGTGTTCCATTGGC...CATGACTAATGTACTTTGTGCTGGTTGTTGAGACTCAGCAGGGAAATAAAGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497892.6
ENST00000675229.1
CDS-3UTR GCA 90 bp ATTTGGTCATACCTTAATGAGTTTCACAGAAAAAGAGTTCAAGCATTAGCGCAACATCAGGATGATCTCTaGCAATGGAACACACTGCTT +
Preference number: 4 (lower is better)
Translates to: IWSYLNEFHRKRVQALAQHQDDL*QWNTLL
Trigger: AAGCAGTGTGTTCCATTGGCAGAGATCATCCTGATG...TTGCGCTAATGCTTGAACTCTTTTTCTGTGAAACTCATTAAGGTATGACCAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR GCA 90 bp TTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTCAATACGGGACATTCACAAAATaGAGTATGATGCAGTTAACA +
Preference number: 4 (lower is better)
Translates to: LKVETSRLIVQQVRESQYGTFTK*SMMQLT
Trigger: TGTTAACTGCATCATACTGCATTTTGTGAATGTCCC...GTATTGACTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR CCA 90 bp TCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTAAACCAAAGTGGCTTTaGAATTCTCAACTGCAATAC +
Preference number: 4 (lower is better)
Translates to: SFLKVETSRLIVQQVRESKPKWL*NSQLQY
Trigger: GTATTGCAGTTGAGAATTCCAAAGCCACTTTGGTTT...ACTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR TCA 90 bp AGAGTAATCAAACATCCTGATGCTCTTCTCACATCCCATAATTTTACTCTACTGGTTAAAAGCCTCCTGTaGTGCACATTTTGGATAGTA +
Preference number: 4 (lower is better)
Translates to: RVIKHPDALLTSHNFTLLVKSLL*CTFWIV
Trigger: TACTATCCAAAATGTGCATCACAGGAGGCTTTTAAC...CAGTAGAGTAAAATTATGGGATGTGAGAAGAGCATCAGGATGTTTGATTACTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR TCA 90 bp TTTGTTGTAGTCTCATCATCATCAGGAACTGGTTCATATAAGGATGGAACCCAAGTCATTCTGGTTGAATaGTTTCATTCTCTGGTTGAT +
Preference number: 4 (lower is better)
Translates to: FVVVSSSSGTGSYKDGTQVILVE*FHSLVD
Trigger: ATCAACCAGAGAATGAAATCATTCAACCAGAATGAC...TTGGGTTCCATCCTTATATGAACCAGTTCCTGATGATGATGAGACTACAACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
CDS-3UTR GCA 90 bp AGTGCTTGGTGGAGACTGGAGACATATGATGACTATAAACTGTTTCCTCAAAATGCCAATGGAACACACTaGTTTACATGTGTAATAAGA +
Preference number: 4 (lower is better)
Translates to: SAWWRLETYDDYKLFPQNANGTH*FTCVIR
Trigger: TCTTATTACACATGTAAAGCAGTGTGTTCCATTGGC...ATTTTGAGGAAACAGTTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR GCA 90 bp ATAATCATTCTTGGCAAAATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTCGTCAATCCTTAAGTTaGTGTCTCTCTTGTCATTCT +
Preference number: 4 (lower is better)
Translates to: IIILGKIILKGGNEQADSRQSLS*CLSCHS
Trigger: AGAATGACAAGAGAGACAGCAACTTAAGGATTGACG...ACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGATTTTGCCAAGAATGATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
CDS-3UTR CCA 90 bp TACCAAACAGTGCTTGGTGGAGACTGGAGACATATGATGACTATAAACTGTTTCAATAAGATTGTCTGCTaGAGTTCTCAAGGTCATAAA +
Preference number: 4 (lower is better)
Translates to: YQTVLGGDWRHMMTINCFNKIVC*SSQGHK
Trigger: TTTATGACCTTGAGAACTCCAGCAGACAATCTTATT...GAAACAGTTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CCA 90 bp GATCTTTATTTCCCTGCTGAGTCTCAACAACCAGCACAAAGTACATTAGTCATGAATAAGATTGTCTGCTaGAGTTCTCAAGGTCATAAA +
Preference number: 4 (lower is better)
Translates to: DLYFPAESQQPAQSTLVMNKIVC*SSQGHK
Trigger: TTTATGACCTTGAGAACTCCAGCAGACAATCTTATT...CATGACTAATGTACTTTGTGCTGGTTGTTGAGACTCAGCAGGGAAATAAAGATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497892.6
ENST00000675229.1
CDS-3UTR CCA 90 bp ATTTGGTCATACCTTAATGAGTTTCACAGAAAAAGAGTTCAAGCATTAGCGCAAGTGCTTGGTGGAGACTaGAGACATATGATGACTATA +
Preference number: 4 (lower is better)
Translates to: IWSYLNEFHRKRVQALAQVLGGD*RHMMTI
Trigger: TATAGTCATCATATGTCTCCAGTCTCCACCAAGCAC...TTGCGCTAATGCTTGAACTCTTTTTCTGTGAAACTCATTAAGGTATGACCAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CCA 90 bp ATCAAACATCCTGATGCTCTTCTCACATCCCATAATTTTACTCTACTGTCAGCACTGTATAAACAGCAATaGTGCTACCATATGGTACAA +
Preference number: 4 (lower is better)
Translates to: IKHPDALLTSHNFTLLSALYKQQ*CYHMVQ
Trigger: TTGTACCATATGGTAGCACCATTGCTGTTTATACAG...TGCTGACAGTAGAGTAAAATTATGGGATGTGAGAAGAGCATCAGGATGTTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
3UTR CAA 72 bp CCCCTAATTATCACAGTCAGGCCTGAATTAGTAACCTaGAATATCAAACACAAACTCTCAAAGTATAGGACA +
Preference number: 4 (lower is better)
Translates to: PLIITVRPELVT*NIKHKLSKYRT
Trigger: TGTCCTATACTTTGAGAGTTTGTGTTTGATATTCAAGGTTACTAATTCAGGCCTGACTGTGATAATTAGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
3UTR CAA 72 bp TTACAGAAGGTGTTGACAAGCTCTCATTTAGTACTGTaGCTAATCCTTGCCACAATGGATGAAATGAACAAA +
Preference number: 4 (lower is better)
Translates to: LQKVLTSSHLVL*LILATMDEMNK
Trigger: TTTGTTCATTTCATCCATTGTGGCAAGGATTAGCAACAGTACTAAATGAGAGCTTGTCAACACCTTCTGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR TCA 90 bp ATAATCATTCTTGGCAAAATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTTTAACTTTCCCATTATaGGCAGTGTTTGCTGATTCA +
Preference number: 4 (lower is better)
Translates to: IIILGKIILKGGNEQADSLTFPL*AVFADS
Trigger: TGAATCAGCAAACACTGCTCATAATGGGAAAGTTAA...ACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGATTTTGCCAAGAATGATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR TCA 90 bp GTAATCAAACATCCTGATGCTCTTCTCACATCCCATAATTTTACTCTACTGTCATTAACTTTCCCATTATaGGCAGTGTTTGCTGATTCA +
Preference number: 4 (lower is better)
Translates to: VIKHPDALLTSHNFTLLSLTFPL*AVFADS
Trigger: TGAATCAGCAAACACTGCTCATAATGGGAAAGTTAA...TGACAGTAGAGTAAAATTATGGGATGTGAGAAGAGCATCAGGATGTTTGATTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR GCA 90 bp GTAATCAAACATCCTGATGCTCTTCTCACATCCCATAATTTTACTCTACTGTCATGTAATAAGATTGTCTaGTGGAGTTCTCAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: VIKHPDALLTSHNFTLLSCNKIV*WSSQGH
Trigger: ATGACCTTGAGAACTCCAGCAGACAATCTTATTACA...TGACAGTAGAGTAAAATTATGGGATGTGAGAAGAGCATCAGGATGTTTGATTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CCA 90 bp TTGCTGTTGCCAAGATATAGTCATAACGTGGAGACCAGGAAACTGCTAATATTTAATAAGATTGTCTGCTaGAGTTCTCAAGGTCATAAA +
Preference number: 4 (lower is better)
Translates to: LLLPRYSHNVETRKLLIFNKIVC*SSQGHK
Trigger: TTTATGACCTTGAGAACTCCAGCAGACAATCTTATT...AAATATTAGCAGTTTCCTGGTCTCCACGTTATGACTATATCTTGGCAACAGCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR TCA 90 bp ATTTGGTCATACCTTAATGAGTTTCACAGAAAAAGAGTTCAAGCATTAGCGCAAAGTTATCTGTTCTCCTaGGTAAACTGTATAAACAGC +
Preference number: 4 (lower is better)
Translates to: IWSYLNEFHRKRVQALAQSYLFS*VNCINS
Trigger: GCTGTTTATACAGTTTACTCAGGAGAACAGATAACT...TTGCGCTAATGCTTGAACTCTTTTTCTGTGAAACTCATTAAGGTATGACCAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CCA 90 bp ATAATCATTCTTGGCAAAATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTCTTTTTAGTATAAACTaGACACAAGGAACACTTCAG +
Preference number: 4 (lower is better)
Translates to: IIILGKIILKGGNEQADSLFSIN*TQGTLQ
Trigger: CTGAAGTGTTCCTTGTGTCCAGTTTATACTAAAAAG...ACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGATTTTGCCAAGAATGATTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR CCA 90 bp ATTTGGTCATACCTTAATGAGTTTCACAGAAAAAGAGTTCAAGCATTAGCGCAAAATAAGATTGTCTGCTaGAGTTCTCAAGGTCATAAA +
Preference number: 4 (lower is better)
Translates to: IWSYLNEFHRKRVQALAQNKIVC*SSQGHK
Trigger: TTTATGACCTTGAGAACTCCAGCAGACAATCTTATT...TTGCGCTAATGCTTGAACTCTTTTTCTGTGAAACTCATTAAGGTATGACCAAAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CCA 90 bp ATTTGGTCATACCTTAATGAGTTTCACAGAAAAAGAGTTCAAGCATTAGCGCAAAAATGTACAAGGCACTaGAGAGAAGTTATACATGAT +
Preference number: 4 (lower is better)
Translates to: IWSYLNEFHRKRVQALAQKCTRH*REVIHD
Trigger: ATCATGTATAACTTCTCTCCAGTGCCTTGTACATTT...TTGCGCTAATGCTTGAACTCTTTTTCTGTGAAACTCATTAAGGTATGACCAAAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR CAA 90 bp TACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACAGTCCTCCAAACCCGTTaGGCGTGCGGACAAAAACCC +
Preference number: 5 (lower is better)
Translates to: YCSNEGFPRPQHLGSRNTVLQTR*ACGQKP
Trigger: GGGTTTTTGTCCGCACGCCAAACGGGTTTGGAGGAC...TGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS TCA 90 bp ACTCACAAGCCTTTAGTGGCTTTCCATCTCACCCAGAGAAAAGCCTaGCCCCTTACAAAGGCTTGCAGGGCCCATATGATCTGGCACCCT +
Preference number: 5 (lower is better)
Translates to: THKPLVAFHLTQRKA*PLTKACRAHMIWHP
Trigger: AGGGTGCCAGATCATATGGGCCCTGCAAGCCTTTGTAAGGGGTCAGGCTTTTCTCTGGGTGAGATGGAAAGCCACTAAAGGCTTGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684394.1
CDS TCA 90 bp TACATGGATGATGTAGCCAGCACTGCCTCTCAGTTCCGTATAACCTaGGCTACCACACCCAGGACGCTGTCACTACCTAGAATTGCCCCT +
Preference number: 5 (lower is better)
Translates to: YMDDVASTASQFRIT*ATTPRTLSLPRIAP
Trigger: AGGGGCAATTCTAGGTAGTGACAGCGTCCTGGGTGTGGTAGCTCAGGTTATACGGAACTGAGAGGCAGTGCTGGCTACATCATCCATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683216.1
CDS GCA 90 bp GGTCCCAGGGAAGGGGCTGAGGCTGGAGGTCGCTTGGGGGCTTGGTaGAGCAGCTGTTTACCAGCCAGTAGGATATATAAATATTTATAT +
Preference number: 5 (lower is better)
Translates to: GPREGAEAGGRLGAW*SSCLPASRIYKYLY
Trigger: ATATAAATATTTATATATCCTACTGGCTGGTAAACAGCTGCTGCACCAAGCCCCCAAGCGACCTCCAGCCTCAGCCCCTTCCCTGGGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000683216.1
ENST00000683688.1
CDS-3UTR CAA 90 bp AGGTACAACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCAGTCCTCCAAACCCGTTaGGCGTGCGGACAAAAACCC +
Preference number: 5 (lower is better)
Translates to: RYNDLCYLYCSNEGFPRPVLQTR*ACGQKP
Trigger: GGGTTTTTGTCCGCACGCCAAACGGGTTTGGAGGAC...TGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTTGTACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp GGTCCTCTAGTACCAACTGCTACCAAACAGTGCTTGGTGGAGACTGGAGACATACCAAAACTCTCCGTGTaGACTCTGCTCTCCGAAGGC +
Preference number: 5 (lower is better)
Translates to: GPLVPTATKQCLVETGDIPKLSV*TLLSEG
Trigger: GCCTTCGGAGAGCAGAGTCAACACGGAGAGTTTTGG...TATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTGGTACTAGAGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CAA 90 bp TGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCACCAAAACTCTCCGTGTaGACTCTGCTCTCCGAAGGC +
Preference number: 5 (lower is better)
Translates to: CYLYCSNEGFPRPQHLGSPKLSV*TLLSEG
Trigger: GCCTTCGGAGAGCAGAGTCAACACGGAGAGTTTTGG...TGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp GTGGCAGCAGGGGTAAGGACTGGGGAATGTGGTACTAATGTGGAAAGAGAGGGGCTCTACTGTCAGCACTaGCTGTTGCCAAGATATAGT +
Preference number: 5 (lower is better)
Translates to: VAAGVRTGECGTNVEREGLYCQH*LLPRYS
Trigger: ACTATATCTTGGCAACAGCAAGTGCTGACAGTAGAG...CCCCTCTCTTTCCACATTAGTACCACATTCCCCAGTCCTTACCCCTGCTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR CAA 90 bp GGTACAACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAGGCAGGAAAATTGCTaGAACCTGGGAAGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: GTTTCVTCTVAMRAFPGHRQENC*NLGSGG
Trigger: ACCTCCGCTTCCCAGGTTCAAGCAATTTTCCTGCCT...GTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTTGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR CAA 90 bp CAACTGCTACCAAACAGTGCTTGGTGGAGACTGGAGACATATGATGACTATAAAGTCCTCCAAACCCGTTaGGCGTGCGGACAAAAACCC +
Preference number: 5 (lower is better)
Translates to: QLLPNSAWWRLETYDDYKVLQTR*ACGQKP
Trigger: GGGTTTTTGTCCGCACGCCAAACGGGTTTGGAGGAC...TTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CAA 90 bp GTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTGCTACCAAACAGTGCTaGGTGGAGACTGGAGACATA +
Preference number: 5 (lower is better)
Translates to: VAMRAFPGHNIWDQGTHFATKQC*VETGDI
Trigger: TATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGC...AAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp GTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGCTACCAAACAGTGCTaGGTGGAGACTGGAGACATA +
Preference number: 5 (lower is better)
Translates to: VTCTVAMRAFPGHNIWDQATKQC*VETGDI
Trigger: TATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGC...TTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp TGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAGCTACCAAACAGTGCTaGGTGGAGACTGGAGACATA +
Preference number: 5 (lower is better)
Translates to: CYLYCSNEGFPRPQHLGSATKQC*VETGDI
Trigger: TATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGC...TGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp TTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGAGCTACCAAACAGTGCTaGGTGGAGACTGGAGACATA +
Preference number: 5 (lower is better)
Translates to: LCYLYCSNEGFPRPQHLGATKQC*VETGDI
Trigger: TATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGC...TCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp GAACAGGATCCAGACTTCAAGTCACAAAGTTGTACTTTGGGTCCTCTAGTACCAAGGCAGGAGAATCACTaGAACTCAGGACGGGGAGGT +
Preference number: 5 (lower is better)
Translates to: EQDPDFKSQSCTLGPLVPRQENH*NSGRGG
Trigger: ACCTCCCCGTCCTGAGTTCAAGTGATTCTCCTGCCT...TGGTACTAGAGGACCCAAAGTACAACTTTGTGACTTGAAGTCTGGATCCTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643708.1
CDS TCA 90 bp CAGGCCAAATGTCACCTTAGTGAAGCCTACCCTGACTTCCCTATGTaGAACAGCAACTCCAACGTCCCAGTATTTCCTGTGATCCTTTCT +
Preference number: 5 (lower is better)
Translates to: QAKCHLSEAYPDFPM*NSNSNVPVFPVILS
Trigger: AGAAAGGATCACAGGAAATACTGGGACGTTGGAGTTGCTGTTTCACATAGGGAAGTCAGGGTAGGCTTCACTAAGGTGACATTTGGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684394.1
CDS-3UTR CAA 90 bp TTTTCTCCATTGGAACTATTCCAGAGCCTCATTCGATTATCTGTACCAACAGTGGTCCTCCAAACCCGTTaGGCGTGCGGACAAAAACCC +
Preference number: 5 (lower is better)
Translates to: FSPLELFQSLIRLSVPTVVLQTR*ACGQKP
Trigger: GGGTTTTTGTCCGCACGCCAAACGGGTTTGGAGGAC...CACTGTTGGTACAGATAATCGAATGAGGCTCTGGAATAGTTCCAATGGAGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CAA 90 bp GATCTTTATTTCCCTGCTGAGTCTCAACAACCAGCACAAAGTACATTAGTCATGGTCCTCCAAACCCGTTaGGCGTGCGGACAAAAACCC +
Preference number: 5 (lower is better)
Translates to: DLYFPAESQQPAQSTLVMVLQTR*ACGQKP
Trigger: GGGTTTTTGTCCGCACGCCAAACGGGTTTGGAGGAC...CATGACTAATGTACTTTGTGCTGGTTGTTGAGACTCAGCAGGGAAATAAAGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497892.6
ENST00000675229.1
CDS-3UTR CAA 90 bp TCTTCATCACTGCTGCTCCAGGCATCTTCAAAGGCCGGATTTAATTGTGATTTTCCAAAACTCTCCGTGTaGACTCTGCTCTCCGAAGGC +
Preference number: 5 (lower is better)
Translates to: SSSLLLQASSKAGFNCDFPKLSV*TLLSEG
Trigger: GCCTTCGGAGAGCAGAGTCAACACGGAGAGTTTTGG...AAAATCACAATTAAATCCGGCCTTTGAAGATGCCTGGAGCAGCAGTGATGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR CAA 90 bp TTGGGTCCTCTAGTACCAACTGCTACCAAACAGTGCTTGGTGGAGACTGGAGACCTTCAAGTCACAAAGTaGTACTTTGGGTCCTCTAGT +
Preference number: 5 (lower is better)
Translates to: LGPLVPTATKQCLVETGDLQVTK*YFGSSS
Trigger: ACTAGAGGACCCAAAGTACAACTTTGTGACTTGAAG...GTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTGGTACTAGAGGACCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CAA 90 bp GCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTGACCTCTACTGTCAGCACTaGCTGTTGCCAAGATATAGT +
Preference number: 5 (lower is better)
Translates to: AMRAFPGHNIWDQGTHFDLYCQH*LLPRYS
Trigger: ACTATATCTTGGCAACAGCAAGTGCTGACAGTAGAG...GTCAAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp TACAACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAAACCCAAGCCAGAATGTaGCAGTCTCTGCTACCACTA +
Preference number: 5 (lower is better)
Translates to: YNDLCYLYCSNEGFPRPQTQARM*QSLLPL
Trigger: TAGTGGTAGCAGAGACTGCAACATTCTGGCTTGGGT...TTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp ATTCCAGAGCCTCATTCGATTATCTGTACCAACAGTGAGGAGGTGAAGTCCATCACCCAAGCCAGAATGTaGCAGTCTCTGCTACCACTA +
Preference number: 5 (lower is better)
Translates to: IPEPHSIICTNSEEVKSITQARM*QSLLPL
Trigger: TAGTGGTAGCAGAGACTGCAACATTCTGGCTTGGGT...GATGGACTTCACCTCCTCACTGTTGGTACAGATAATCGAATGAGGCTCTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CAA 90 bp GGTCCTCTAGTACCAACTGCTACCAAACAGTGCTTGGTGGAGACTGGAGACATAAACGACTTGTGTTACTaGTACTGTAGCAATGAGGGC +
Preference number: 5 (lower is better)
Translates to: GPLVPTATKQCLVETGDINDLCY*YCSNEG
Trigger: GCCCTCATTGCTACAGTACAAGTAACACAAGTCGTT...TATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTGGTACTAGAGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CAA 90 bp GCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTGACCTGAGGTACAACGACTaGTGTTACTTGTACTGTAGC +
Preference number: 5 (lower is better)
Translates to: AMRAFPGHNIWDQGTHFDLRYND*CYLYCS
Trigger: GCTACAGTACAAGTAACACAAGTCGTTGTACCTCAG...GTCAAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp TGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCACAGGAGCTAGGGTTGTaGGAGAAACATTGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: CYLYCSNEGFPRPQHLGSQELGL*EKHWSK
Trigger: CTTTGACCAATGTTTCTCCAACAACCCTAGCTCCTG...TGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR CAA 90 bp TTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGAGCTGGAATTAAGTGTTaGAGCCACATGGGAGAAGCA +
Preference number: 5 (lower is better)
Translates to: LCYLYCSNEGFPRPQHLGAGIKC*SHMGEA
Trigger: TGCTTCTCCCATGTGGCTCAAACACTTAATTCCAGC...TCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS CCA 90 bp GGCTTCTCATACATCACAGGCCACACAACTGATTACTACACCAAGTaGCTGGCTGGAGTAACAGTATTGATTACTTTCCTGACCAGCATC +
Preference number: 5 (lower is better)
Translates to: GFSYITGHTTDYYTK*LAGVTVLITFLTSI
Trigger: GATGCTGGTCAGGAAAGTAATCAATACTGTTACTCCAGCCAGCCACTTGGTGTAGTAATCAGTTGTGTGGCCTGTGATGTATGAGAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675920.1
ENST00000682041.1
ENST00000682874.1
CDS-3UTR CAA 90 bp GCAAAATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGACCAAAACTCTCCGTGTaGACTCTGCTCTCCGAAGGC +
Preference number: 5 (lower is better)
Translates to: AKSFLKVETSRLIVQQVRPKLSV*TLLSEG
Trigger: GCCTTCGGAGAGCAGAGTCAACACGGAGAGTTTTGG...TCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGATTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp GATCTTTATTTCCCTGCTGAGTCTCAACAACCAGCACAAAGTACATTAGTCATGCCAAAACTCTCCGTGTaGACTCTGCTCTCCGAAGGC +
Preference number: 5 (lower is better)
Translates to: DLYFPAESQQPAQSTLVMPKLSV*TLLSEG
Trigger: GCCTTCGGAGAGCAGAGTCAACACGGAGAGTTTTGG...CATGACTAATGTACTTTGTGCTGGTTGTTGAGACTCAGCAGGGAAATAAAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497892.6
ENST00000675229.1
CDS-3UTR CAA 90 bp GCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTGACTCACAAAGTTGTACTTaGGGTCCTCTAGTACCAACT +
Preference number: 5 (lower is better)
Translates to: AMRAFPGHNIWDQGTHFDSQSCT*GPLVPT
Trigger: AGTTGGTACTAGAGGACCCAAAGTACAACTTTGTGA...GTCAAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp GGTCCTCTAGTACCAACTGCTACCAAACAGTGCTTGGTGGAGACTGGAGACATACTTCAAGTCACAAAGTaGTACTTTGGGTCCTCTAGT +
Preference number: 5 (lower is better)
Translates to: GPLVPTATKQCLVETGDILQVTK*YFGSSS
Trigger: ACTAGAGGACCCAAAGTACAACTTTGTGACTTGAAG...TATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTGGTACTAGAGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CAA 90 bp TGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACTTCAAGTCACAAAGTaGTACTTTGGGTCCTCTAGT +
Preference number: 5 (lower is better)
Translates to: CTVAMRAFPGHNIWDQGTLQVTK*YFGSSS
Trigger: ACTAGAGGACCCAAAGTACAACTTTGTGACTTGAAG...TGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp TTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGACTCTACTGTCAGCACTaGCTGTTGCCAAGATATAGT +
Preference number: 5 (lower is better)
Translates to: LCYLYCSNEGFPRPQHLGLYCQH*LLPRYS
Trigger: ACTATATCTTGGCAACAGCAAGTGCTGACAGTAGAG...TCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp TACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACACATTATGAGCAGTGTTaGCTGATTCAACAGCTTGTG +
Preference number: 5 (lower is better)
Translates to: YCSNEGFPRPQHLGSRNTHYEQC*LIQQLV
Trigger: CACAAGCTGTTGAATCAGCAAACACTGCTCATAATG...TGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp AACAGAAGAACTAGCACTATCCTGAGCCCTAGATTTAACCTTCCGATGTCCAGAACCCAAGCCAGAATGTaGCAGTCTCTGCTACCACTA +
Preference number: 5 (lower is better)
Translates to: NRRTSTILSPRFNLPMSRTQARM*QSLLPL
Trigger: TAGTGGTAGCAGAGACTGCAACATTCTGGCTTGGGT...TCTGGACATCGGAAGGTTAAATCTAGGGCTCAGGATAGTGCTAGTTCTTCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR CAA 90 bp GTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAAACGACTTGTGTTACTaGTACTGTAGCAATGAGGGC +
Preference number: 5 (lower is better)
Translates to: VTCTVAMRAFPGHNIWDQNDLCY*YCSNEG
Trigger: GCCCTCATTGCTACAGTACAAGTAACACAAGTCGTT...TTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp TGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAACGACTTGTGTTACTaGTACTGTAGCAATGAGGGC +
Preference number: 5 (lower is better)
Translates to: CYLYCSNEGFPRPQHLGSNDLCY*YCSNEG
Trigger: GCCCTCATTGCTACAGTACAAGTAACACAAGTCGTT...TGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp ATAATCATTCTTGGCAAAATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTTGCAGTGAGCTGAGATaGCGCCACTGGCCACTGCAC +
Preference number: 5 (lower is better)
Translates to: IIILGKIILKGGNEQADSCSELR*RHWPLH
Trigger: GTGCAGTGGCCAGTGGCGCAATCTCAGCTCACTGCA...ACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGATTTTGCCAAGAATGATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643708.1
CDS-3UTR CAA 90 bp ATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGAGGCGGGTGGATCATTaGAGGTCAGCAGTTCGCAAC +
Preference number: 5 (lower is better)
Translates to: IILKGGNEQADSTASKRKRRVDH*RSAVRN
Trigger: GTTGCGAACTGCTGACCTCAAATGATCCACCCGCCT...CTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR CAA 90 bp CAGAAGAGCATGAACTCGGAGAGCGGTTATCAATCCACTAGCACAAAGTTTACCTACCAGGAGCTAGGGTaGTTGGAGAAACATTGGTCA +
Preference number: 5 (lower is better)
Translates to: QKSMNSESGYQSTSTKFTYQELG*LEKHWS
Trigger: TGACCAATGTTTCTCCAACAACCCTAGCTCCTGGTA...GGTAAACTTTGTGCTAGTGGATTGATAACCGCTCTCCGAGTTCATGCTCTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR CAA 90 bp GTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAAATAAACATGTAGCCTaGAACAGGGGACCAGCTGAA +
Preference number: 5 (lower is better)
Translates to: VTCTVAMRAFPGHNIWDQNKHVA*NRGPAE
Trigger: TTCAGCTGGTCCCCTGTTCAAGGCTACATGTTTATT...TTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS CCA 90 bp GTTGATGTCATGGAGAACTTGGAATGCCAGGCTGAGTTTAGACAATaGGAATCCCTAGAGGGTTTGGGTAGTGACATGATGAAACTGCTT +
Preference number: 5 (lower is better)
Translates to: VDVMENLECQAEFRQ*ESLEGLGSDMMKLL
Trigger: AAGCAGTTTCATCATGTCACTACCCAAACCCTCTAGGGATTCCCATTGTCTAAACTCAGCCTGGCATTCCAAGTTCTCCATGACATCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682380.1
ENST00000682750.1
CDS-3UTR CAA 90 bp AGATATAGTCATAACGTGGAGACCAGGAAACTGCTAATATTTCTTGTCTGTGACCCAAAACTCTCCGTGTaGACTCTGCTCTCCGAAGGC +
Preference number: 5 (lower is better)
Translates to: RYSHNVETRKLLIFLVCDPKLSV*TLLSEG
Trigger: GCCTTCGGAGAGCAGAGTCAACACGGAGAGTTTTGG...GTCACAGACAAGAAATATTAGCAGTTTCCTGGTCTCCACGTTATGACTATATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CAA 90 bp TTGCTGTTGCCAAGATATAGTCATAACGTGGAGACCAGGAAACTGCTAATATTTCCAAAACTCTCCGTGTaGACTCTGCTCTCCGAAGGC +
Preference number: 5 (lower is better)
Translates to: LLLPRYSHNVETRKLLIFPKLSV*TLLSEG
Trigger: GCCTTCGGAGAGCAGAGTCAACACGGAGAGTTTTGG...AAATATTAGCAGTTTCCTGGTCTCCACGTTATGACTATATCTTGGCAACAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CAA 90 bp TGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACAACATGTGTAATAAGATaGTCTGCTGGAGTTCTCAAG +
Preference number: 5 (lower is better)
Translates to: CTVAMRAFPGHNIWDQGTTCVIR*SAGVLK
Trigger: CTTGAGAACTCCAGCAGACAATCTTATTACACATGT...TGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp AGACTTCAAGTCACAAAGTTGTACTTTGGGTCCTCTAGTACCAACTGCTACCAAGCTACCAAACAGTGCTaGGTGGAGACTGGAGACATA +
Preference number: 5 (lower is better)
Translates to: RLQVTKLYFGSSSTNCYQATKQC*VETGDI
Trigger: TATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGC...TTGGTAGCAGTTGGTACTAGAGGACCCAAAGTACAACTTTGTGACTTGAAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CAA 90 bp GTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTTCACAAAGTTGTACTTaGGGTCCTCTAGTACCAACT +
Preference number: 5 (lower is better)
Translates to: VAMRAFPGHNIWDQGTHFSQSCT*GPLVPT
Trigger: AGTTGGTACTAGAGGACCCAAAGTACAACTTTGTGA...AAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp TGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCATCACAAAGTTGTACTTaGGGTCCTCTAGTACCAACT +
Preference number: 5 (lower is better)
Translates to: CYLYCSNEGFPRPQHLGSSQSCT*GPLVPT
Trigger: AGTTGGTACTAGAGGACCCAAAGTACAACTTTGTGA...TGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp CTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTGCAGTCTCTGCTACCACTGTCAGCACTTGCTGTaGCCAAGATATAGTCATAAC +
Preference number: 5 (lower is better)
Translates to: LVHIRMEPKPECCSLCYHCQHLL*PRYSHN
Trigger: GTTATGACTATATCTTGGCAACAGCAAGTGCTGACA...GTGGTAGCAGAGACTGCAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR CAA 90 bp TTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGACATTATGAGCAGTGTTaGCTGATTCAACAGCTTGTG +
Preference number: 5 (lower is better)
Translates to: LCYLYCSNEGFPRPQHLGHYEQC*LIQQLV
Trigger: CACAAGCTGTTGAATCAGCAAACACTGCTCATAATG...TCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp CAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTGCAGTCTCTGCCATTATGAGCAGTGTTaGCTGATTCAACAGCTTGTG +
Preference number: 5 (lower is better)
Translates to: QELVHIRMEPKPECCSLCHYEQC*LIQQLV
Trigger: CACAAGCTGTTGAATCAGCAAACACTGCTCATAATG...GCAGAGACTGCAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR CAA 90 bp AGACTTCAAGTCACAAAGTTGTACTTTGGGTCCTCTAGTACCAACTGCTACCAAACCCAAGCCAGAATGTaGCAGTCTCTGCTACCACTA +
Preference number: 5 (lower is better)
Translates to: RLQVTKLYFGSSSTNCYQTQARM*QSLLPL
Trigger: TAGTGGTAGCAGAGACTGCAACATTCTGGCTTGGGT...TTGGTAGCAGTTGGTACTAGAGGACCCAAAGTACAACTTTGTGACTTGAAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CAA 90 bp CAGAAGAGCATGAACTCGGAGAGCGGTTATCAATCCACTAGCACAAAGTTTACCATAATCACGTGTGGGTaGACACAGACGGAGACAATA +
Preference number: 5 (lower is better)
Translates to: QKSMNSESGYQSTSTKFTIITCG*TQTETI
Trigger: TATTGTCTCCGTCTGTGTCAACCCACACGTGATTAT...GGTAAACTTTGTGCTAGTGGATTGATAACCGCTCTCCGAGTTCATGCTCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR CAA 90 bp TTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGAACAGACTCAGGACTTTaGATTTCCAGTCCACTGTTA +
Preference number: 5 (lower is better)
Translates to: LCYLYCSNEGFPRPQHLGTDSGL*ISSPLL
Trigger: TAACAGTGGACTGGAAATCAAAAGTCCTGAGTCTGT...TCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS GCA 90 bp TATTCCCATTTACAGATGAGAAAGACACACAGAGGTTTGGACATTTaGCCAATGTCATACAGCTGTCAGCAGCACAGCCAGGATATGAAC +
Preference number: 5 (lower is better)
Translates to: YSHLQMRKTHRGLDI*PMSYSCQQHSQDMN
Trigger: GTTCATATCCTGGCTGTGCTGCTGACAGCTGTATGACATTGGGCAAATGTCCAAACCTCTGTGTGTCTTTCTCATCTGTAAATGGGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477893.1
ENST00000682380.1
ENST00000682750.1
CDS CCA 90 bp GTATATAGTTCTGTACTGGGGGCGCACTTTGACTGGTTAGCTCTTTaGAAAGATATTAGAGTCCAGACTGCTATAGCTCCTTCTGGTCTT +
Preference number: 5 (lower is better)
Translates to: VYSSVLGAHFDWLAL*KDIRVQTAIAPSGL
Trigger: AAGACCAGAAGGAGCTATAGCAGTCTGGACTCTAATATCTTTCCAAAGAGCTAACCAGTCAAAGTGCGCCCCCAGTACAGAACTATATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682041.1
CDS-3UTR CAA 90 bp ATAATCATTCTTGGCAAAATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTCCAAAACTCTCCGTGTaGACTCTGCTCTCCGAAGGC +
Preference number: 5 (lower is better)
Translates to: IIILGKIILKGGNEQADSPKLSV*TLLSEG
Trigger: GCCTTCGGAGAGCAGAGTCAACACGGAGAGTTTTGG...ACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGATTTTGCCAAGAATGATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp GTAGCAATGAGGGCTTTCCCAGGCCACAACATCTGGGATCAAGGAACACATTTTACATGTGTAATAAGATaGTCTGCTGGAGTTCTCAAG +
Preference number: 5 (lower is better)
Translates to: VAMRAFPGHNIWDQGTHFTCVIR*SAGVLK
Trigger: CTTGAGAACTCCAGCAGACAATCTTATTACACATGT...AAAATGTGTTCCTTGATCCCAGATGTTGTGGCCTGGGAAAGCCCTCATTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp GATCTTTATTTCCCTGCTGAGTCTCAACAACCAGCACAAAGTACATTAGTCATGGCTACCAAACAGTGCTaGGTGGAGACTGGAGACATA +
Preference number: 5 (lower is better)
Translates to: DLYFPAESQQPAQSTLVMATKQC*VETGDI
Trigger: TATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGC...CATGACTAATGTACTTTGTGCTGGTTGTTGAGACTCAGCAGGGAAATAAAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497892.6
ENST00000675229.1
CDS-3UTR CAA 90 bp CATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTGCAGTCTCTGTCAGCACTTGCTGTaGCCAAGATATAGTCATAAC +
Preference number: 5 (lower is better)
Translates to: HQELVHIRMEPKPECCSLCQHLL*PRYSHN
Trigger: GTTATGACTATATCTTGGCAACAGCAAGTGCTGACA...GAGACTGCAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR CAA 90 bp ATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGACCCAAGCCAGAATGTaGCAGTCTCTGCTACCACTA +
Preference number: 5 (lower is better)
Translates to: IILKGGNEQADSTASKRKTQARM*QSLLPL
Trigger: TAGTGGTAGCAGAGACTGCAACATTCTGGCTTGGGT...CTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp GAATGTGAGAACAGGATCCAGACTTCAAGTCACAAAGTTGTACTTTGGGTCCTCCTGAGGTACAACGACTaGTGTTACTTGTACTGTAGC +
Preference number: 5 (lower is better)
Translates to: ECENRIQTSSHKVVLWVLLRYND*CYLYCS
Trigger: GCTACAGTACAAGTAACACAAGTCGTTGTACCTCAG...GAGGACCCAAAGTACAACTTTGTGACTTGAAGTCTGGATCCTGTTCTCACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CAA 90 bp CTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTGCAGTCTCTGCTACCACCTCTTGTCATTCTGGTaGAATGATTTCATTCTCTGG +
Preference number: 5 (lower is better)
Translates to: LVHIRMEPKPECCSLCYHLLSFW*NDFILW
Trigger: CCAGAGAATGAAATCATTCAACCAGAATGACAAGAG...GTGGTAGCAGAGACTGCAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
CDS GCA 90 bp GGATTTCAAGGTCCAATACCAATACCAAGGTCAACTGCCAATATCTaGAATTCCTTTGCTAACATCCTTCCACTTGTCAAGACTTCACCC +
Preference number: 5 (lower is better)
Translates to: GFQGPIPIPRSTANI*NSFANILPLVKTSP
Trigger: GGGTGAAGTCTTGACAAGTGGAAGGATGTTAGCAAAGGAATTGCAGATATTGGCAGTTGACCTTGGTATTGGTATTGGACCTTGAAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683216.1
CDS CCA 90 bp CAGTTTTCCTCAGTATATAGTTCTGTACTGGGGGCGCACTTTGACTaGTTAGCTCTTTGGAAAGATATTAGAGTCCAGACTGCTATAGCT +
Preference number: 5 (lower is better)
Translates to: QFSSVYSSVLGAHFD*LALWKDIRVQTAIA
Trigger: AGCTATAGCAGTCTGGACTCTAATATCTTTCCAAAGAGCTAACCAGTCAAAGTGCGCCCCCAGTACAGAACTATATACTGAGGAAAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682041.1
CDS-3UTR CAA 90 bp TACAACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAAACATGTGTAATAAGATaGTCTGCTGGAGTTCTCAAG +
Preference number: 5 (lower is better)
Translates to: YNDLCYLYCSNEGFPRPQTCVIR*SAGVLK
Trigger: CTTGAGAACTCCAGCAGACAATCTTATTACACATGT...TTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp AGTGCTTGGTGGAGACTGGAGACATATGATGACTATAAACTGTTTCCTCAAAATGCTACCAAACAGTGCTaGGTGGAGACTGGAGACATA +
Preference number: 5 (lower is better)
Translates to: SAWWRLETYDDYKLFPQNATKQC*VETGDI
Trigger: TATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGC...ATTTTGAGGAAACAGTTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CAA 90 bp TTGCTGTTGCCAAGATATAGTCATAACGTGGAGACCAGGAAACTGCTAATATTTGCTACCAAACAGTGCTaGGTGGAGACTGGAGACATA +
Preference number: 5 (lower is better)
Translates to: LLLPRYSHNVETRKLLIFATKQC*VETGDI
Trigger: TATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGC...AAATATTAGCAGTTTCCTGGTCTCCACGTTATGACTATATCTTGGCAACAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CAA 90 bp CTTCATCACTGCTGCTCCAGGCATCTTCAAAGGCCGGATTTAATTGTGATTTTGCTTCAAGTCACAAAGTaGTACTTTGGGTCCTCTAGT +
Preference number: 5 (lower is better)
Translates to: LHHCCSRHLQRPDLIVILLQVTK*YFGSSS
Trigger: ACTAGAGGACCCAAAGTACAACTTTGTGACTTGAAG...CAAAATCACAATTAAATCCGGCCTTTGAAGATGCCTGGAGCAGCAGTGATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR CAA 90 bp GAACAGGATCCAGACTTCAAGTCACAAAGTTGTACTTTGGGTCCTCTAGTACCACATTATGAGCAGTGTTaGCTGATTCAACAGCTTGTG +
Preference number: 5 (lower is better)
Translates to: EQDPDFKSQSCTLGPLVPHYEQC*LIQQLV
Trigger: CACAAGCTGTTGAATCAGCAAACACTGCTCATAATG...TGGTACTAGAGGACCCAAAGTACAACTTTGTGACTTGAAGTCTGGATCCTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CAA 90 bp TCTGTTCTCCTGAGTAAACTGTATAAACAGCAATGGTGCTACCATATGGTACAAACCCAAGCCAGAATGTaGCAGTCTCTGCTACCACTA +
Preference number: 5 (lower is better)
Translates to: SVLLSKLYKQQWCYHMVQTQARM*QSLLPL
Trigger: TAGTGGTAGCAGAGACTGCAACATTCTGGCTTGGGT...TTGTACCATATGGTAGCACCATTGCTGTTTATACAGTTTACTCAGGAGAACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CAA 90 bp TCATCATCATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTGAACGACTTGTGTTACTaGTACTGTAGCAATGAGGGC +
Preference number: 5 (lower is better)
Translates to: SSSSGTGSYKDGTQARMLNDLCY*YCSNEG
Trigger: GCCCTCATTGCTACAGTACAAGTAACACAAGTCGTT...CAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATGATGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR CAA 90 bp AACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATACAGTTACTTGCAGTTaGGAAGCAGACTTCCTTTTT +
Preference number: 5 (lower is better)
Translates to: NDLCYLYCSNEGFPRPQHTVTCS*EADFLF
Trigger: AAAAAGGAAGTCTGCTTCCAAACTGCAAGTAACTGT...ATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS GCA 90 bp CATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTaGAGTCTCTGCTACCACTATAAAGTTCAAGTGTGTTTTCTCCAT +
Preference number: 5 (lower is better)
Translates to: HQELVHIRMEPKPEC*SLCYHYKVQVCFLH
Trigger: ATGGAGAAAACACACTTGAACTTTATAGTGGTAGCAGAGACTGCAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682217.1
ENST00000684621.1
CDS CCA 90 bp TACTTTGGGTCCTCTAGTACCAAAAACCTGCTACCAAACAGTGCTTaGTGGAGACTGGAGACATATGATGACTATAAACTGTTTCCTCAA +
Preference number: 5 (lower is better)
Translates to: YFGSSSTKNLLPNSA*WRLETYDDYKLFPQ
Trigger: TTGAGGAAACAGTTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGGTTTTTGGTACTAGAGGACCCAAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000495985.5
ENST00000683216.1
CDS-3UTR CAA 90 bp CATCATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTGCAGTACATGTGTAATAAGATaGTCTGCTGGAGTTCTCAAG +
Preference number: 5 (lower is better)
Translates to: HHQELVHIRMEPKPECCSTCVIR*SAGVLK
Trigger: CTTGAGAACTCCAGCAGACAATCTTATTACACATGT...ACTGCAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR CAA 90 bp TCATCATCATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTGTGTCAGCACTTGCTGTaGCCAAGATATAGTCATAAC +
Preference number: 5 (lower is better)
Translates to: SSSSGTGSYKDGTQARMLCQHLL*PRYSHN
Trigger: GTTATGACTATATCTTGGCAACAGCAAGTGCTGACA...CAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATGATGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR CAA 90 bp TCAAACATCCTGATGCTCTTCTCACATCCCATAATTTTACTCTACTGTCAGCACCTCTACTGTCAGCACTaGCTGTTGCCAAGATATAGT +
Preference number: 5 (lower is better)
Translates to: SNILMLFSHPIILLYCQHLYCQH*LLPRYS
Trigger: ACTATATCTTGGCAACAGCAAGTGCTGACAGTAGAG...GTGCTGACAGTAGAGTAAAATTATGGGATGTGAGAAGAGCATCAGGATGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CAA 90 bp TTTTCTCCATTGGAACTATTCCAGAGCCTCATTCGATTATCTGTACCAACAGTGCTCTACTGTCAGCACTaGCTGTTGCCAAGATATAGT +
Preference number: 5 (lower is better)
Translates to: FSPLELFQSLIRLSVPTVLYCQH*LLPRYS
Trigger: ACTATATCTTGGCAACAGCAAGTGCTGACAGTAGAG...CACTGTTGGTACAGATAATCGAATGAGGCTCTGGAATAGTTCCAATGGAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CAA 90 bp TTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTCAATACCTGAGGTACAACGACTaGTGTTACTTGTACTGTAGC +
Preference number: 5 (lower is better)
Translates to: LKVETSRLIVQQVRESQYLRYND*CYLYCS
Trigger: GCTACAGTACAAGTAACACAAGTCGTTGTACCTCAG...GTATTGACTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp GCAAAATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGACTGAGGTACAACGACTaGTGTTACTTGTACTGTAGC +
Preference number: 5 (lower is better)
Translates to: AKSFLKVETSRLIVQQVRLRYND*CYLYCS
Trigger: GCTACAGTACAAGTAACACAAGTCGTTGTACCTCAG...TCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGATTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp AAGTCACAAAGTTGTACTTTGGGTCCTCTAGTACCAACTGCTACCAAACAGTGCCTCTTGTCATTCTGGTaGAATGATTTCATTCTCTGG +
Preference number: 5 (lower is better)
Translates to: KSQSCTLGPLVPTATKQCLLSFW*NDFILW
Trigger: CCAGAGAATGAAATCATTCAACCAGAATGACAAGAG...GCACTGTTTGGTAGCAGTTGGTACTAGAGGACCCAAAGTACAACTTTGTGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
CDS-3UTR CAA 90 bp GAATGTGAGAACAGGATCCAGACTTCAAGTCACAAAGTTGTACTTTGGGTCCTCCTCTTGTCATTCTGGTaGAATGATTTCATTCTCTGG +
Preference number: 5 (lower is better)
Translates to: ECENRIQTSSHKVVLWVLLLSFW*NDFILW
Trigger: CCAGAGAATGAAATCATTCAACCAGAATGACAAGAG...GAGGACCCAAAGTACAACTTTGTGACTTGAAGTCTGGATCCTGTTCTCACATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
CDS-3UTR CAA 90 bp AACAGTGCTTGGTGGAGACTGGAGACATATGATGACTATAAACTGTTTCCTCAAGCGTCAATCCTTAAGTaGCTGTCTCTCTTGTCATTC +
Preference number: 5 (lower is better)
Translates to: NSAWWRLETYDDYKLFPQASILK*LSLLSF
Trigger: GAATGACAAGAGAGACAGCAACTTAAGGATTGACGC...TTGAGGAAACAGTTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
CDS-3UTR CAA 90 bp GAATGTGAGAACAGGATCCAGACTTCAAGTCACAAAGTTGTACTTTGGGTCCTCGATTTCATTCTCTGGTaGATTCTATCTCCCTTCAAC +
Preference number: 5 (lower is better)
Translates to: ECENRIQTSSHKVVLWVLDFILW*ILSPFN
Trigger: GTTGAAGGGAGATAGAATCAACCAGAGAATGAAATC...GAGGACCCAAAGTACAACTTTGTGACTTGAAGTCTGGATCCTGTTCTCACATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643034.1
CDS-3UTR CAA 90 bp CATCAGGAACTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTGCAGTCTCCCGTTTGTAATGTATTaGTATCCCATACTTTCAGAG +
Preference number: 5 (lower is better)
Translates to: HQELVHIRMEPKPECCSLPFVMY*YPILSE
Trigger: CTCTGAAAGTATGGGATACAAATACATTACAAACGG...GAGACTGCAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAGTTCCTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643708.1
CDS-3UTR CAA 90 bp AACGACTTGTGTTACTTGTACTGTAGCAATGAGGGCTTTCCCAGGCCACAACATAAAACCAAAGTGGCTTaGGAATTCTCAACTGCAATA +
Preference number: 5 (lower is better)
Translates to: NDLCYLYCSNEGFPRPQHKTKVA*EFSTAI
Trigger: TATTGCAGTTGAGAATTCCAAAGCCACTTTGGTTTT...ATGTTGTGGCCTGGGAAAGCCCTCATTGCTACAGTACAAGTAACACAAGTCGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR CAA 90 bp TTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTCAATACCTAATTGTGCTAGGCTaGCCATTCCATTTCTGGCAT +
Preference number: 5 (lower is better)
Translates to: LKVETSRLIVQQVRESQYLIVLG*PFHFWH
Trigger: ATGCCAGAAATGGAATGGCAAGCCTAGCACAATTAG...GTATTGACTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR CAA 90 bp ATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGCTGTATCTGAGGATGTaGCTGATAGAGCTAGCAAGA +
Preference number: 5 (lower is better)
Translates to: IILKGGNEQADSTASKRKLYLRM*LIELAR
Trigger: TCTTGCTAGCTCTATCAGCAACATCCTCAGATACAG...CTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR CAA 90 bp ATAATCATTCTTGGCAAAATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTCAAAAGAAAACTGGCTaGTGCCAGTCACCTGAGCCA +
Preference number: 5 (lower is better)
Translates to: IIILGKIILKGGNEQADSQKKTG*CQSPEP
Trigger: TGGCTCAGGTGACTGGCACAAGCCAGTTTTCTTTTG...ACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGATTTTGCCAAGAATGATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR CAA 90 bp AACAGTGCTTGGTGGAGACTGGAGACATATGATGACTATAAACTGTTTCCTCAATCACAAAGTTGTACTTaGGGTCCTCTAGTACCAACT +
Preference number: 5 (lower is better)
Translates to: NSAWWRLETYDDYKLFPQSQSCT*GPLVPT
Trigger: AGTTGGTACTAGAGGACCCAAAGTACAACTTTGTGA...TTGAGGAAACAGTTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CAA 90 bp GATCTTTATTTCCCTGCTGAGTCTCAACAACCAGCACAAAGTACATTAGTCATGTCACAAAGTTGTACTTaGGGTCCTCTAGTACCAACT +
Preference number: 5 (lower is better)
Translates to: DLYFPAESQQPAQSTLVMSQSCT*GPLVPT
Trigger: AGTTGGTACTAGAGGACCCAAAGTACAACTTTGTGA...CATGACTAATGTACTTTGTGCTGGTTGTTGAGACTCAGCAGGGAAATAAAGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497892.6
ENST00000675229.1
CDS-3UTR CAA 90 bp GATCTTTATTTCCCTGCTGAGTCTCAACAACCAGCACAAAGTACATTAGTCATGCTTCAAGTCACAAAGTaGTACTTTGGGTCCTCTAGT +
Preference number: 5 (lower is better)
Translates to: DLYFPAESQQPAQSTLVMLQVTK*YFGSSS
Trigger: ACTAGAGGACCCAAAGTACAACTTTGTGACTTGAAG...CATGACTAATGTACTTTGTGCTGGTTGTTGAGACTCAGCAGGGAAATAAAGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497892.6
ENST00000675229.1
CDS-3UTR CAA 90 bp GCAAAATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGACTTCAAGTCACAAAGTaGTACTTTGGGTCCTCTAGT +
Preference number: 5 (lower is better)
Translates to: AKSFLKVETSRLIVQQVRLQVTK*YFGSSS
Trigger: ACTAGAGGACCCAAAGTACAACTTTGTGACTTGAAG...TCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGATTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp TCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTTGTCAGCACTTGCTGTaGCCAAGATATAGTCATAAC +
Preference number: 5 (lower is better)
Translates to: SFLKVETSRLIVQQVRESCQHLL*PRYSHN
Trigger: GTTATGACTATATCTTGGCAACAGCAAGTGCTGACA...ACTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp AACAGTGCTTGGTGGAGACTGGAGACATATGATGACTATAAACTGTTTCCTCAATGTCAGCACTTGCTGTaGCCAAGATATAGTCATAAC +
Preference number: 5 (lower is better)
Translates to: NSAWWRLETYDDYKLFPQCQHLL*PRYSHN
Trigger: GTTATGACTATATCTTGGCAACAGCAAGTGCTGACA...TTGAGGAAACAGTTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CAA 90 bp TCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTCATTATGAGCAGTGTTaGCTGATTCAACAGCTTGTG +
Preference number: 5 (lower is better)
Translates to: SFLKVETSRLIVQQVRESHYEQC*LIQQLV
Trigger: CACAAGCTGTTGAATCAGCAAACACTGCTCATAATG...ACTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp TTGCCAAGATATAGTCATAACGTGGAGACCAGGAAACTGCTAATATTTCTTGTCCTGAGGTACAACGACTaGTGTTACTTGTACTGTAGC +
Preference number: 5 (lower is better)
Translates to: LPRYSHNVETRKLLIFLVLRYND*CYLYCS
Trigger: GCTACAGTACAAGTAACACAAGTCGTTGTACCTCAG...GACAAGAAATATTAGCAGTTTCCTGGTCTCCACGTTATGACTATATCTTGGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CAA 90 bp TCTGTTCTCCTGAGTAAACTGTATAAACAGCAATGGTGCTACCATATGGTACAAGCGTCAATCCTTAAGTaGCTGTCTCTCTTGTCATTC +
Preference number: 5 (lower is better)
Translates to: SVLLSKLYKQQWCYHMVQASILK*LSLLSF
Trigger: GAATGACAAGAGAGACAGCAACTTAAGGATTGACGC...TTGTACCATATGGTAGCACCATTGCTGTTTATACAGTTTACTCAGGAGAACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
CDS-3UTR CAA 90 bp ATTTGGTCATACCTTAATGAGTTTCACAGAAAAAGAGTTCAAGCATTAGCGCAAACCAAGGGGACAAGATaGAAAGTAGAATGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: IWSYLNEFHRKRVQALAQTKGTR*KVEWPG
Trigger: CCCAGGCCATTCTACTTTCAATCTTGTCCCCTTGGT...TTGCGCTAATGCTTGAACTCTTTTTCTGTGAAACTCATTAAGGTATGACCAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS TCA 90 bp ATACTGCTTTTGATTAATAGTGGCAGCAGTGGTGGCAACTGTTTATaGCGTGCCAGGTCTTACGTTAATCATGTTGTGCATATTATCTCA +
Preference number: 5 (lower is better)
Translates to: ILLLINSGSSGGNCL*RARSYVNHVVHIIS
Trigger: TGAGATAATATGCACAACATGATTAACGTAAGACCTGGCACGTCATAAACAGTTGCCACCACTGCTGCCACTATTAATCAAAAGCAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682041.1
CDS CCA 90 bp AAGTTGCTGTCTCTCTTGTCATTCTGGTTGAATGATTTCATTCTCTaGTTGATTCCTAAGGAATGGTATCTCCCTTCAACAGGTTCAATG +
Preference number: 5 (lower is better)
Translates to: KLLSLLSFWLNDFIL*LIPKEWYLPSTGSM
Trigger: CATTGAACCTGTTGAAGGGAGATACCATTCCTTAGGAATCAACCAGAGAATGAAATCATTCAACCAGAATGACAAGAGAGACAGCAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497892.6
ENST00000682380.1
CDS CCA 90 bp AAGTTGCTGTCTCTCTTGTCATTCTGGTTGAATGATTTCATTCTCTaGTTGATTCTATCTCCCTTCAACAGGTTCAATGTCAAGGGTGTT +
Preference number: 5 (lower is better)
Translates to: KLLSLLSFWLNDFIL*LILSPFNRFNVKGV
Trigger: AACACCCTTGACATTGAACCTGTTGAAGGGAGATAGAATCAACCAGAGAATGAAATCATTCAACCAGAATGACAAGAGAGACAGCAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643034.1
CDS-3UTR CAA 90 bp TTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTCAATACACATGTGTAATAAGATaGTCTGCTGGAGTTCTCAAG +
Preference number: 5 (lower is better)
Translates to: LKVETSRLIVQQVRESQYTCVIR*SAGVLK
Trigger: CTTGAGAACTCCAGCAGACAATCTTATTACACATGT...GTATTGACTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp TACCAAACAGTGCTTGGTGGAGACTGGAGACATATGATGACTATAAACTGTTTCACATGTGTAATAAGATaGTCTGCTGGAGTTCTCAAG +
Preference number: 5 (lower is better)
Translates to: YQTVLGGDWRHMMTINCFTCVIR*SAGVLK
Trigger: CTTGAGAACTCCAGCAGACAATCTTATTACACATGT...GAAACAGTTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CAA 90 bp GATCTTTATTTCCCTGCTGAGTCTCAACAACCAGCACAAAGTACATTAGTCATGACATGTGTAATAAGATaGTCTGCTGGAGTTCTCAAG +
Preference number: 5 (lower is better)
Translates to: DLYFPAESQQPAQSTLVMTCVIR*SAGVLK
Trigger: CTTGAGAACTCCAGCAGACAATCTTATTACACATGT...CATGACTAATGTACTTTGTGCTGGTTGTTGAGACTCAGCAGGGAAATAAAGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497892.6
ENST00000675229.1
CDS-3UTR CAA 90 bp TTTGTTGTAGTCTCATCATCATCAGGAACTGGTTCATATAAGGATGGAACCCAATCACAAAGTTGTACTTaGGGTCCTCTAGTACCAACT +
Preference number: 5 (lower is better)
Translates to: FVVVSSSSGTGSYKDGTQSQSCT*GPLVPT
Trigger: AGTTGGTACTAGAGGACCCAAAGTACAACTTTGTGA...TTGGGTTCCATCCTTATATGAACCAGTTCCTGATGATGATGAGACTACAACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
CDS-3UTR CAA 90 bp ATAATCATTCTTGGCAAAATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTCTCTACTGTCAGCACTaGCTGTTGCCAAGATATAGT +
Preference number: 5 (lower is better)
Translates to: IIILGKIILKGGNEQADSLYCQH*LLPRYS
Trigger: ACTATATCTTGGCAACAGCAAGTGCTGACAGTAGAG...ACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGATTTTGCCAAGAATGATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp TCTGTTCTCCTGAGTAAACTGTATAAACAGCAATGGTGCTACCATATGGTACAACATTATGAGCAGTGTTaGCTGATTCAACAGCTTGTG +
Preference number: 5 (lower is better)
Translates to: SVLLSKLYKQQWCYHMVQHYEQC*LIQQLV
Trigger: CACAAGCTGTTGAATCAGCAAACACTGCTCATAATG...TTGTACCATATGGTAGCACCATTGCTGTTTATACAGTTTACTCAGGAGAACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS-3UTR CAA 90 bp AGAGTAATCAAACATCCTGATGCTCTTCTCACATCCCATAATTTTACTCTACTGGCGTCAATCCTTAAGTaGCTGTCTCTCTTGTCATTC +
Preference number: 5 (lower is better)
Translates to: RVIKHPDALLTSHNFTLLASILK*LSLLSF
Trigger: GAATGACAAGAGAGACAGCAACTTAAGGATTGACGC...CAGTAGAGTAAAATTATGGGATGTGAGAAGAGCATCAGGATGTTTGATTACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
CDS-3UTR CAA 90 bp TTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTCAATACAAATGCTCCATGACATaGGTCTGGGCAATGATTTTT +
Preference number: 5 (lower is better)
Translates to: LKVETSRLIVQQVRESQYKCSMT*VWAMIF
Trigger: AAAAATCATTGCCCAGACCAATGTCATGGAGCATTT...GTATTGACTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS-3UTR CAA 90 bp TTAAAGGTGGAAACGAGCAGGCTGATAGTACAGCAAGTAAGAGAAAGTCAATACTCTCATTTAGTACTGTaGCTAATCCTTGCCACAATG +
Preference number: 5 (lower is better)
Translates to: LKVETSRLIVQQVRESQYSHLVL*LILATM
Trigger: CATTGTGGCAAGGATTAGCAACAGTACTAAATGAGA...GTATTGACTTTCTCTTACTTGCTGTACTATCAGCCTGCTCGTTTCCACCTTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS TCA 90 bp CAGATTCAAAACACGATCAGTTTAGTTGCAGCAAAGCATTTGTGTTaGAAACTGGTAGAACATAGGATTGAAGGAACAAGGGTTGATGTC +
Preference number: 5 (lower is better)
Translates to: QIQNTISLVAAKHLC*KLVEHRIEGTRVDV
Trigger: GACATCAACCCTTGTTCCTTCAATCCTATGTTCTACCAGTTTTCAACACAAATGCTTTGCTGCAACTAAACTGATCGTGTTTTGAATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682380.1
ENST00000682750.1
CDS TCA 90 bp TTGAAAATCTCTGCCAGATTTGTGTATTCTGTCTGGTTTCCAATCTaGTTTTCAGTGACACCTTTACAGCTCTCATGGTGGATGGTAAAT +
Preference number: 5 (lower is better)
Translates to: LKISARFVYSVWFPI*FSVTPLQLSWWMVN
Trigger: ATTTACCATCCACCATGAGAGCTGTAAAGGTGTCACTGAAAATCAGATTGGAAACCAGACAGAATACACAAATCTGGCAGAGATTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000682041.1
ENST00000682874.1
CDS-3UTR CAA 90 bp ATAATCATTCTTGGCAAAATCATTCTTAAAGGTGGAAACGAGCAGGCTGATAGTCTTCAAGTCACAAAGTaGTACTTTGGGTCCTCTAGT +
Preference number: 5 (lower is better)
Translates to: IIILGKIILKGGNEQADSLQVTK*YFGSSS
Trigger: ACTAGAGGACCCAAAGTACAACTTTGTGACTTGAAG...ACTATCAGCCTGCTCGTTTCCACCTTTAAGAATGATTTTGCCAAGAATGATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp ATTTGGTCATACCTTAATGAGTTTCACAGAAAAAGAGTTCAAGCATTAGCGCAAAACGACTTGTGTTACTaGTACTGTAGCAATGAGGGC +
Preference number: 5 (lower is better)
Translates to: IWSYLNEFHRKRVQALAQNDLCY*YCSNEG
Trigger: GCCCTCATTGCTACAGTACAAGTAACACAAGTCGTT...TTGCGCTAATGCTTGAACTCTTTTTCTGTGAAACTCATTAAGGTATGACCAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
ENST00000675378.1
ENST00000676185.1
CDS-3UTR CAA 90 bp AGATATAGTCATAACGTGGAGACCAGGAAACTGCTAATATTTCTTGTCTGTGACAAGTTGCTGTCTCTCTaGTCATTCTGGTTGAATGAT +
Preference number: 5 (lower is better)
Translates to: RYSHNVETRKLLIFLVCDKLLSL*SFWLND
Trigger: ATCATTCAACCAGAATGACAAGAGAGACAGCAACTT...GTCACAGACAAGAAATATTAGCAGTTTCCTGGTCTCCACGTTATGACTATATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
CDS-3UTR CAA 90 bp AGTGCTTGGTGGAGACTGGAGACATATGATGACTATAAACTGTTTCCTCAAAATAAGTTGCTGTCTCTCTaGTCATTCTGGTTGAATGAT +
Preference number: 5 (lower is better)
Translates to: SAWWRLETYDDYKLFPQNKLLSL*SFWLND
Trigger: ATCATTCAACCAGAATGACAAGAGAGACAGCAACTT...ATTTTGAGGAAACAGTTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000497892.6
ENST00000643034.1
CDS-3UTR CAA 90 bp TTGCTGTTGCCAAGATATAGTCATAACGTGGAGACCAGGAAACTGCTAATATTTAAGTTGCTGTCTCTCTaGTCATTCTGGTTGAATGAT +
Preference number: 5 (lower is better)
Translates to: LLLPRYSHNVETRKLLIFKLLSL*SFWLND
Trigger: ATCATTCAACCAGAATGACAAGAGAGACAGCAACTT...AAATATTAGCAGTTTCCTGGTCTCCACGTTATGACTATATCTTGGCAACAGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000381118.7
ENST00000643034.1
CDS-3UTR CAA 90 bp ATTTGGTCATACCTTAATGAGTTTCACAGAAAAAGAGTTCAAGCATTAGCGCAAAGGTTTGGACCTTCATaGAAAGAGCTCCCAAGAAGT +
Preference number: 5 (lower is better)
Translates to: IWSYLNEFHRKRVQALAQRFGPS*KELPRS
Trigger: ACTTCTTGGGAGCTCTTTCAATGAAGGTCCAAACCT...TTGCGCTAATGCTTGAACTCTTTTTCTGTGAAACTCATTAAGGTATGACCAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676185.1
CDS GCA 90 bp CAAGTTCTCAAAAAGTTTTATTTAACTTACAGCTGCCTAACTGGCTaGAATTCAACAGAAGAGCTTGAAGATGTATATCCCATGCCTGTT +
Preference number: 5 (lower is better)
Translates to: QVLKKFYLTYSCLTG*NSTEELEDVYPMPV
Trigger: AACAGGCATGGGATATACATCTTCAAGCTCTTCTGTTGAATTGCAGCCAGTTAGGCAGCTGTAAGTTAAATAAAACTTTTTGAGAACTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000683216.1
ENST00000683688.1
CDS-3UTR CAA 90 bp AGAGTAATCAAACATCCTGATGCTCTTCTCACATCCCATAATTTTACTCTACTGACATGTGTAATAAGATaGTCTGCTGGAGTTCTCAAG +
Preference number: 5 (lower is better)
Translates to: RVIKHPDALLTSHNFTLLTCVIR*SAGVLK
Trigger: CTTGAGAACTCCAGCAGACAATCTTATTACACATGT...CAGTAGAGTAAAATTATGGGATGTGAGAAGAGCATCAGGATGTTTGATTACTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381118.7
ENST00000643034.1
ENST00000643708.1
CDS TCA 90 bp CTTTGTAGACTGCCCTTCACATTTGGCTTGTCTTATGTTTCCTCATaGTTAAATTTGAGTGATACAATTTGGTCAGGAATATCACAGAAG +
Preference number: 5 (lower is better)
Translates to: LCRLPFTFGLSYVSS*LNLSDTIWSGISQK
Trigger: CTTCTGTGATATTCCTGACCAAATTGTATCACTCAAATTTAATCATGAGGAAACATAAGACAAGCCAAATGTGAAGGGCAGTCTACAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683216.1
ENST00000683688.1
CDS TCA 90 bp TTTAATCCTCACAACCATACTATAATCATTATTCCCATTTACAGATaGGAAAGACACACAGAGGTTTGGACATTTGCCCAATGTCATACA +
Preference number: 5 (lower is better)
Translates to: FNPHNHTIIIIPIYR*ERHTEVWTFAQCHT
Trigger: TGTATGACATTGGGCAAATGTCCAAACCTCTGTGTGTCTTTCTCATCTGTAAATGGGAATAATGATTATAGTATGGTTGTGAGGATTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477893.1
ENST00000682380.1
ENST00000682750.1
CDS TCA 90 bp CTTCACATTTGGCTTGTCTTATGTTTCCTCATGATTAAATTTGAGTaGTACAATTTGGTCAGGAATATCACAGAAGTGATGTCCCATAAC +
Preference number: 5 (lower is better)
Translates to: LHIWLVLCFLMIKFE*YNLVRNITEVMSHN
Trigger: GTTATGGGACATCACTTCTGTGATATTCCTGACCAAATTGTATCACTCAAATTTAATCATGAGGAAACATAAGACAAGCCAAATGTGAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683216.1
ENST00000683688.1
CDS TCA 72 bp GGAGAATCACTTGAACTCAGGACGGGGAGGTTGCAGTaGGCTGAGATTGCGCCACTGGCCACTGCACTCCAG +
Preference number: 6 (lower is better)
Translates to: GESLELRTGRLQ*AEIAPLATALQ
Trigger: CTGGAGTGCAGTGGCCAGTGGCGCAATCTCAGCTCACTGCAACCTCCCCGTCCTGAGTTCAAGTGATTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000643708.1
ENST00000682375.1
ENST00000682418.1
ENST00000683460.1
CDS CAA 72 bp TGCTCTCCGAAGGCGAAGAGGGTCCTCCAAACCCGTTaGGCGTGCGGACAAAAACCCCAGCATATCGTGTCC +
Preference number: 6 (lower is better)
Translates to: CSPKAKRVLQTR*ACGQKPQHIVS
Trigger: GGACACGATATGCTGGGGTTTTTGTCCGCACGCCAAACGGGTTTGGAGGACCCTCTTCGCCTTCGGAGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 24 transcripts:
ENST00000265038.10
ENST00000381118.7
ENST00000439176.6
ENST00000477893.1
ENST00000497892.6
ENST00000643034.1
ENST00000643708.1
ENST00000675042.2
ENST00000675229.1
ENST00000675378.1
ENST00000675452.2
ENST00000676185.1
ENST00000682041.1
ENST00000682217.1
ENST00000682246.1
ENST00000682375.1
ENST00000682380.1
ENST00000682418.1
ENST00000682874.1
ENST00000683199.1
ENST00000683460.1
ENST00000684394.1
ENST00000684453.1
ENST00000684621.1
CDS CCA 72 bp CCAGGCGTGGTGGCGGGTACCTGTAATCCCAACTACTaGGACTATAGGTGCATGCCACTGGCAAGAAATGCT +
Preference number: 6 (lower is better)
Translates to: PGVVAGTCNPNY*DYRCMPLARNA
Trigger: AGCATTTCTTGCCAGTGGCATGCACCTATAGTCCCAGTAGTTGGGATTACAGGTACCCGCCACCACGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683688.1
CDS TCA 72 bp AAGCCTGACCCCTTACAAAGGCTTGCAGGGCCCATATaGTCTGGCACCCTAGTTCCTTCTGTTCCTCATCTG +
Preference number: 6 (lower is better)
Translates to: KPDPLQRLAGPI*SGTLVPSVPHL
Trigger: CAGATGAGGAACAGAAGGAACTAGGGTGCCAGATCATATGGGCCCTGCAAGCCTTTGTAAGGGGTCAGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684394.1
CDS GCA 72 bp GTTGGAGTAGGGTCTTGTAGGTCCCCTTTTAGTTGCTaGGTTAAGGTGACGTCTAAGAGGTCCCAGGGAAGG +
Preference number: 6 (lower is better)
Translates to: VGVGSCRSPFSC*VKVTSKRSQGR
Trigger: CCTTCCCTGGGACCTCTTAGACGTCACCTTAACGCAGCAACTAAAAGGGGACCTACAAGACCCTACTCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000683216.1
ENST00000683688.1
CDS GCA 72 bp AGGGTTGGAGTAGGGTCTTGTAGGTCCCCTTTTAGTTaGTGCGTTAAGGTGACGTCTAAGAGGTCCCAGGGA +
Preference number: 6 (lower is better)
Translates to: RVGVGSCRSPFS*CVKVTSKRSQG
Trigger: TCCCTGGGACCTCTTAGACGTCACCTTAACGCAGCAACTAAAAGGGGACCTACAAGACCCTACTCCAACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000683216.1
ENST00000683688.1
CDS GCA 72 bp AGTGTGGCTGCCTCTCCTTCCAAATCTTACACCTTTTaGTACCCTAGAGACAGCAAGGTCAACTCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: SVAASPSKSYTF*YPRDSKVNSSS
Trigger: GGAGGAGGAGTTGACCTTGCTGTCTCTAGGGTAGCAAAAGGTGTAAGATTTGGAAGGAGAGGCAGCCACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682418.1
CDS GCA 72 bp GATCAGTCAATTAGTTACCAACACTGCCATCAGCATTaGCAGAGAGGTGGAGGGCAGACATCATGGAATCAG +
Preference number: 6 (lower is better)
Translates to: DQSISYQHCHQH*QRGGGQTSWNQ
Trigger: CTGATTCCATGATGTCTGCCCTCCACCTCTCTGGCAATGCTGATGGCAGTGTTGGTAACTAATTGACTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682246.1
CDS GCA 72 bp TCTTGCCTCAGTCTCCCAGGTACCTGGGACTATAGGTaGATGCCACTGGCAAGAAATGCTTTAAAAGTCTCT +
Preference number: 6 (lower is better)
Translates to: SCLSLPGTWDYR*MPLARNALKVS
Trigger: AGAGACTTTTAAAGCATTTCTTGCCAGTGGCATGCACCTATAGTCCCAGGTACCTGGGAGACTGAGGCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684621.1
CDS GCA 72 bp TTACAGATGAGAAAGACACACAGAGGTTTGGACATTTaGCCAATGTCATACAGCTGTCAGCAGCACAGCCAG +
Preference number: 6 (lower is better)
Translates to: LQMRKTHRGLDI*PMSYSCQQHSQ
Trigger: CTGGCTGTGCTGCTGACAGCTGTATGACATTGGGCAAATGTCCAAACCTCTGTGTGTCTTTCTCATCTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477893.1
ENST00000682380.1
ENST00000682750.1
CDS GCA 72 bp GAAGGAACAAGGGTTGATGTCATGGAGAACTTGGAATaGCAGGCTGAGTTTAGACAATGGGAATCCCTAGAG +
Preference number: 6 (lower is better)
Translates to: EGTRVDVMENLE*QAEFRQWESLE
Trigger: CTCTAGGGATTCCCATTGTCTAAACTCAGCCTGGCATTCCAAGTTCTCCATGACATCAACCCTTGTTCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682380.1
ENST00000682750.1
CDS GCA 72 bp GCGGGTACCTGTAATCCCAACTACTGGGACTATAGGTaGATGCCACTGGCAAGAAATGCTTTAAAAGTCTCT +
Preference number: 6 (lower is better)
Translates to: AGTCNPNYWDYR*MPLARNALKVS
Trigger: AGAGACTTTTAAAGCATTTCTTGCCAGTGGCATGCACCTATAGTCCCAGTAGTTGGGATTACAGGTACCCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683688.1
CDS CCA 72 bp ATGGAGAACTTGGAATGCCAGGCTGAGTTTAGACAATaGGAATCCCTAGAGGGTTTGGGTAGTGACATGATG +
Preference number: 6 (lower is better)
Translates to: MENLECQAEFRQ*ESLEGLGSDMM
Trigger: CATCATGTCACTACCCAAACCCTCTAGGGATTCCCATTGTCTAAACTCAGCCTGGCATTCCAAGTTCTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682380.1
ENST00000682750.1
CDS CCA 72 bp TCTGTACTGGGGGCGCACTTTGACTGGTTAGCTCTTTaGAAAGATATTAGAGTCCAGACTGCTATAGCTCCT +
Preference number: 6 (lower is better)
Translates to: SVLGAHFDWLAL*KDIRVQTAIAP
Trigger: AGGAGCTATAGCAGTCTGGACTCTAATATCTTTCCAAAGAGCTAACCAGTCAAAGTGCGCCCCCAGTACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682041.1
CDS CAA 90 bp GTAGAACATAGGATTGAAGGAACAAGGGTTGATGTCATGGAGAACTaGGAATGCCAGGCTGAGTTTAGACAATGGGAATCCCTAGAGGGT +
Preference number: 6 (lower is better)
Translates to: VEHRIEGTRVDVMEN*ECQAEFRQWESLEG
Trigger: ACCCTCTAGGGATTCCCATTGTCTAAACTCAGCCTGGCATTCCAAGTTCTCCATGACATCAACCCTTGTTCCTTCAATCCTATGTTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682380.1
ENST00000682750.1
CDS CAA 90 bp GCTGCAATTCAACAGAAGAGCTTGAAGATGTATATCCCATGCCTGTaGAGAAGTTTACTTCATAAGGGGAAGCTTGGGGTGATGCACAGC +
Preference number: 6 (lower is better)
Translates to: AAIQQKSLKMYIPCL*RSLLHKGKLGVMHS
Trigger: GCTGTGCATCACCCCAAGCTTCCCCTTATGAAGTAAACTTCTCAACAGGCATGGGATATACATCTTCAAGCTCTTCTGTTGAATTGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000683216.1
ENST00000683688.1
CDS CCA 72 bp ACCGTGCCTGGCCTGTCAAAAGTGTGTTTTCTCCATTaGAACTATTCCAGAGCCTCATTCGATTATCTGTAC +
Preference number: 6 (lower is better)
Translates to: TVPGLSKVCFLH*NYSRASFDYLY
Trigger: GTACAGATAATCGAATGAGGCTCTGGAATAGTTCCAATGGAGAAAACACACTTTTGACAGGCCAGGCACGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265038.10
CDS CAA 72 bp TTTACAGATGAGAAAGACACACAGAGGTTTGGACATTaGCCCAATGTCATACAGCTGTCAGCAGCACAGCCA +
Preference number: 6 (lower is better)
Translates to: FTDEKDTQRFGH*PNVIQLSAAQP
Trigger: TGGCTGTGCTGCTGACAGCTGTATGACATTGGGCAAATGTCCAAACCTCTGTGTGTCTTTCTCATCTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477893.1
ENST00000682380.1
ENST00000682750.1
CDS CAA 72 bp AGGATTGAAGGAACAAGGGTTGATGTCATGGAGAACTaGGAATGCCAGGCTGAGTTTAGACAATGGGAATCC +
Preference number: 6 (lower is better)
Translates to: RIEGTRVDVMEN*ECQAEFRQWES
Trigger: GGATTCCCATTGTCTAAACTCAGCCTGGCATTCCAAGTTCTCCATGACATCAACCCTTGTTCCTTCAATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682380.1
ENST00000682750.1
CDS CAA 90 bp GGAACCCCTAACAGTTCCTTTCATCTACTTCTCTTCCTCTCCAGCTaGGATTTCAAGGTCCAATACCAATACCAAGGTCAACTGCCAATA +
Preference number: 6 (lower is better)
Translates to: GTPNSSFHLLLFLSS*DFKVQYQYQGQLPI
Trigger: TATTGGCAGTTGACCTTGGTATTGGTATTGGACCTTGAAATCCAAGCTGGAGAGGAAGAGAAGTAGATGAAAGGAACTGTTAGGGGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683216.1
CDS TCA 72 bp CTTAGGAGAAGGGAAGAGTTGCAAGGGAAAGGGACTTaGGGTAGGGAATACAACAGATTCAAAACACGATCA +
Preference number: 6 (lower is better)
Translates to: LRRREELQGKGT*GREYNRFKTRS
Trigger: TGATCGTGTTTTGAATCTGTTGTATTCCCTACCTCAAGTCCCTTTCCCTTGCAACTCTTCCCTTCTCCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682380.1
ENST00000682750.1
CDS CAA 72 bp GATTACTACACCAAGTGGCTGGCTGGAGTAACAGTATaGATTACTTTCCTGACCAGCATCCAAACCCAAAAG +
Preference number: 6 (lower is better)
Translates to: DYYTKWLAGVTV*ITFLTSIQTQK
Trigger: CTTTTGGGTTTGGATGCTGGTCAGGAAAGTAATCAATACTGTTACTCCAGCCAGCCACTTGGTGTAGTAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675920.1
ENST00000682041.1
ENST00000682874.1
CDS CAA 72 bp CAACAGAAGAGCTTGAAGATGTATATCCCATGCCTGTaGAGAAGTTTACTTCATAAGGGGAAGCTTGGGGTG +
Preference number: 6 (lower is better)
Translates to: QQKSLKMYIPCL*RSLLHKGKLGV
Trigger: CACCCCAAGCTTCCCCTTATGAAGTAAACTTCTCAACAGGCATGGGATATACATCTTCAAGCTCTTCTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000683216.1
ENST00000683688.1
CDS CAA 90 bp TTATTCCCATTTACAGATGAGAAAGACACACAGAGGTTTGGACATTaGCCCAATGTCATACAGCTGTCAGCAGCACAGCCAGGATATGAA +
Preference number: 6 (lower is better)
Translates to: LFPFTDEKDTQRFGH*PNVIQLSAAQPGYE
Trigger: TTCATATCCTGGCTGTGCTGCTGACAGCTGTATGACATTGGGCAAATGTCCAAACCTCTGTGTGTCTTTCTCATCTGTAAATGGGAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477893.1
ENST00000682380.1
ENST00000682750.1
CDS CAA 90 bp GCTACCACACCCAGGACGCTGTCACTACCTAGAATTGCCCCTTCTTaGAAATCATACATTTCAGTTATCTATGACCACAATCTTCTACCA +
Preference number: 6 (lower is better)
Translates to: ATTPRTLSLPRIAPS*KSYISVIYDHNLLP
Trigger: TGGTAGAAGATTGTGGTCATAGATAACTGAAATGTATGATTTCAAAGAAGGGGCAATTCTAGGTAGTGACAGCGTCCTGGGTGTGGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683216.1
CDS TCA 72 bp TTGATTAATAGTGGCAGCAGTGGTGGCAACTGTTTATaGCGTGCCAGGTCTTACGTTAATCATGTTGTGCAT +
Preference number: 6 (lower is better)
Translates to: LINSGSSGGNCL*RARSYVNHVVH
Trigger: ATGCACAACATGATTAACGTAAGACCTGGCACGTCATAAACAGTTGCCACCACTGCTGCCACTATTAATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682041.1
CDS GCA 72 bp CTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTaGAGTCTCTGCTACCACTATAAAGTTCAAGTGTGT +
Preference number: 6 (lower is better)
Translates to: LVHIRMEPKPEC*SLCYHYKVQVC
Trigger: ACACACTTGAACTTTATAGTGGTAGCAGAGACTGCAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682217.1
ENST00000684621.1
CDS GCA 72 bp GGTCCAATACCAATACCAAGGTCAACTGCCAATATCTaGAATTCCTTTGCTAACATCCTTCCACTTGTCAAG +
Preference number: 6 (lower is better)
Translates to: GPIPIPRSTANI*NSFANILPLVK
Trigger: CTTGACAAGTGGAAGGATGTTAGCAAAGGAATTGCAGATATTGGCAGTTGACCTTGGTATTGGTATTGGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683216.1
CDS CCA 72 bp TCAGTATATAGTTCTGTACTGGGGGCGCACTTTGACTaGTTAGCTCTTTGGAAAGATATTAGAGTCCAGACT +
Preference number: 6 (lower is better)
Translates to: SVYSSVLGAHFD*LALWKDIRVQT
Trigger: AGTCTGGACTCTAATATCTTTCCAAAGAGCTAACCAGTCAAAGTGCGCCCCCAGTACAGAACTATATACTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682041.1
CDS CAA 72 bp GAACAGGATCCAGACTTCAAGTCACAAAGTTGTACTTaGGGTCCTCTAGTACCAAAAACCTGCTACCAAACA +
Preference number: 6 (lower is better)
Translates to: EQDPDFKSQSCT*GPLVPKTCYQT
Trigger: TGTTTGGTAGCAGGTTTTTGGTACTAGAGGACCCAAAGTACAACTTTGTGACTTGAAGTCTGGATCCTGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000495985.5
ENST00000683216.1
CDS CAA 72 bp CAATACCAAGGTCAACTGCCAATATCTGCAATTCCTTaGCTAACATCCTTCCACTTGTCAAGACTTCACCCT +
Preference number: 6 (lower is better)
Translates to: QYQGQLPISAIP*LTSFHLSRLHP
Trigger: AGGGTGAAGTCTTGACAAGTGGAAGGATGTTAGCAAAGGAATTGCAGATATTGGCAGTTGACCTTGGTATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683216.1
CDS GCA 72 bp ATTACGATGTATTTCCATAGTTATACCAAGTGTGGCTaGCTCTCCTTCCAAATCTTACACCTTTTGCTACCC +
Preference number: 6 (lower is better)
Translates to: ITMYFHSYTKCG*LSFQILHLLLP
Trigger: GGGTAGCAAAAGGTGTAAGATTTGGAAGGAGAGGCAGCCACACTTGGTATAACTATGGAAATACATCGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682418.1
CDS GCA 72 bp CCATCTTCTCCCAGTTTGAGCTGCTGTAGTCAAATTTaGTTGCTAAGTTTTCAACCAACCTGTTGGTTACTT +
Preference number: 6 (lower is better)
Translates to: PSSPSLSCCSQI*LLSFQPTCWLL
Trigger: AAGTAACCAACAGGTTGGTTGAAAACTTAGCAAGCAAATTTGACTACAGCAGCTCAAACTGGGAGAAGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682041.1
CDS GCA 72 bp CTGGTTCATATAAGGATGGAACCCAAGCCAGAATGTTaGAGTCTCTGCTACCACTATAAAGTTCCTATAACA +
Preference number: 6 (lower is better)
Translates to: LVHIRMEPKPEC*SLCYHYKVPIT
Trigger: TGTTATAGGAACTTTATAGTGGTAGCAGAGACTGCAACATTCTGGCTTGGGTTCCATCCTTATATGAACCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683216.1
ENST00000683688.1
CDS CCA 72 bp CCAAAAACCTGCTACCAAACAGTGCTTGGTGGAGACTaGAGACATATGATGACTATAAACTGTTTCCTCAAA +
Preference number: 6 (lower is better)
Translates to: PKTCYQTVLGGD*RHMMTINCFLK
Trigger: TTTGAGGAAACAGTTTATAGTCATCATATGTCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGGTTTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000495985.5
ENST00000683216.1
CDS CAA 72 bp AATGTGAGAACAGGATCCAGACTTCAAGTCACAAAGTaGTACTTTGGGTCCTCTAGTACCAAAAACCTGCTA +
Preference number: 6 (lower is better)
Translates to: NVRTGSRLQVTK*YFGSSSTKNLL
Trigger: TAGCAGGTTTTTGGTACTAGAGGACCCAAAGTACAACTTTGTGACTTGAAGTCTGGATCCTGTTCTCACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000495985.5
ENST00000683216.1
CDS CAA 72 bp CAGGCTGAGTTTAGACAATGGGAATCCCTAGAGGGTTaGGGTAGTGACATGATGAAACTGCTTTATAATAAG +
Preference number: 6 (lower is better)
Translates to: QAEFRQWESLEG*GSDMMKLLYNK
Trigger: CTTATTATAAAGCAGTTTCATCATGTCACTACCCAAACCCTCTAGGGATTCCCATTGTCTAAACTCAGCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682380.1
ENST00000682750.1
CDS CAA 72 bp TCTTCTCCCAGTTTGAGCTGCTGTAGTCAAATTTGCTaGCTAAGTTTTCAACCAACCTGTTGGTTACTTTGG +
Preference number: 6 (lower is better)
Translates to: SSPSLSCCSQIC*LSFQPTCWLLW
Trigger: CCAAAGTAACCAACAGGTTGGTTGAAAACTTAGCAAGCAAATTTGACTACAGCAGCTCAAACTGGGAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682041.1
CDS CAA 90 bp TTGCTGTCTCTCTTGTCATTCTGGTTGAATGATTTCATTCTCTGGTaGATTCCTAAGGAATGGTATCTCCCTTCAACAGGTTCAATGTCA +
Preference number: 6 (lower is better)
Translates to: LLSLLSFWLNDFILW*IPKEWYLPSTGSMS
Trigger: TGACATTGAACCTGTTGAAGGGAGATACCATTCCTTAGGAATCAACCAGAGAATGAAATCATTCAACCAGAATGACAAGAGAGACAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497892.6
ENST00000682380.1
CDS GCA 72 bp CTCCATGAGGATAGGACTTTTCCATGTTTTGCCAACTaGTGTCTAATACTGCCTGGCAAATTAAATGCTAAT +
Preference number: 6 (lower is better)
Translates to: LHEDRTFPCFAN*CLILPGKLNAN
Trigger: ATTAGCATTTAATTTGCCAGGCAGTATTAGACAGCAGTTGGCAAAACATGGAAAAGTCCTATCCTCATGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684394.1
CDS CCA 72 bp TTGAATGATTTCATTCTCTGGTTGATTCCTAAGGAATaGTATCTCCCTTCAACAGGTTCAATGTCAAGGGTG +
Preference number: 6 (lower is better)
Translates to: LNDFILWLIPKE*YLPSTGSMSRV
Trigger: CACCCTTGACATTGAACCTGTTGAAGGGAGATACCATTCCTTAGGAATCAACCAGAGAATGAAATCATTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497892.6
ENST00000682380.1
CDS CAA 72 bp CTCTTGTCATTCTGGTTGAATGATTTCATTCTCTGGTaGATTCCTAAGGAATGGTATCTCCCTTCAACAGGT +
Preference number: 6 (lower is better)
Translates to: LLSFWLNDFILW*IPKEWYLPSTG
Trigger: ACCTGTTGAAGGGAGATACCATTCCTTAGGAATCAACCAGAGAATGAAATCATTCAACCAGAATGACAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497892.6
ENST00000682380.1
CDS CAA 72 bp TTGCTTGCTAAGTTTTCAACCAACCTGTTGGTTACTTaGGACTTATCCAGGTATATCAGATGCCTTATCGCT +
Preference number: 6 (lower is better)
Translates to: LLAKFSTNLLVT*DLSRYIRCLIA
Trigger: AGCGATAAGGCATCTGATATACCTGGATAAGTCCAAAGTAACCAACAGGTTGGTTGAAAACTTAGCAAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682041.1
CDS CAA 90 bp TTGGAATGCCAGGCTGAGTTTAGACAATGGGAATCCCTAGAGGGTTaGGGTAGTGACATGATGAAACTGCTTTATAATAAGATTAATTCT +
Preference number: 6 (lower is better)
Translates to: LECQAEFRQWESLEG*GSDMMKLLYNKINS
Trigger: AGAATTAATCTTATTATAAAGCAGTTTCATCATGTCACTACCCAAACCCTCTAGGGATTCCCATTGTCTAAACTCAGCCTGGCATTCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682380.1
ENST00000682750.1
CDS CAA 90 bp TGGAACAGTTCTTCAGTCTCTTTGGCTTTTCTGACTTTGATAATTTaGGATATACAGCAGTTACTTTGTAGACTGCCCTTCACATTTGGC +
Preference number: 6 (lower is better)
Translates to: WNSSSVSLAFLTLII*DIQQLLCRLPFTFG
Trigger: GCCAAATGTGAAGGGCAGTCTACAAAGTAACTGCTGTATATCCAAAATTATCAAAGTCAGAAAAGCCAAAGAGACTGAAGAACTGTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683216.1
ENST00000683688.1
CDS TCA 72 bp CATGCTAAAGTAAGATGTTTCTCATATACTAGTAGATaGGACCATGGTGGAAGTATCTCCCTTCAACAGGTT +
Preference number: 6 (lower is better)
Translates to: HAKVRCFSYTSR*DHGGSISLQQV
Trigger: AACCTGTTGAAGGGAGATACTTCCACCATGGTCTCATCTACTAGTATATGAGAAACATCTTACTTTAGCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682874.1
CDS CCA 72 bp TCTCTCTTGTCATTCTGGTTGAATGATTTCATTCTCTaGTTGATTCCTAAGGAATGGTATCTCCCTTCAACA +
Preference number: 6 (lower is better)
Translates to: SLLSFWLNDFIL*LIPKEWYLPST
Trigger: TGTTGAAGGGAGATACCATTCCTTAGGAATCAACCAGAGAATGAAATCATTCAACCAGAATGACAAGAGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497892.6
ENST00000682380.1
CDS CCA 72 bp GCGTCAATCCTTAAGTTGCTGTCTCTCTTGTCATTCTaGTTGAATGATTTCATTCTCTGGTTGATTCTATCT +
Preference number: 6 (lower is better)
Translates to: ASILKLLSLLSF*LNDFILWLILS
Trigger: AGATAGAATCAACCAGAGAATGAAATCATTCAACCAGAATGACAAGAGAGACAGCAACTTAAGGATTGACGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643034.1
CDS CAA 72 bp TCAATCCTTAAGTTGCTGTCTCTCTTGTCATTCTGGTaGAATGATTTCATTCTCTGGTTGATTCTATCTCCC +
Preference number: 6 (lower is better)
Translates to: SILKLLSLLSFW*NDFILWLILSP
Trigger: GGGAGATAGAATCAACCAGAGAATGAAATCATTCAACCAGAATGACAAGAGAGACAGCAACTTAAGGATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643034.1
CDS CAA 72 bp GGGCTGAAAGGAGTAAAAGTATATGTAATACTGCTTTaGATTAATAGTGGCAGCAGTGGTGGCAACTGTTTA +
Preference number: 6 (lower is better)
Translates to: GLKGVKVYVILL*INSGSSGGNCL
Trigger: TAAACAGTTGCCACCACTGCTGCCACTATTAATCAAAAGCAGTATTACATATACTTTTACTCCTTTCAGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682041.1
CDS TCA 72 bp GATAGAACTAAAAGGGACCTTAGACACCATCTAGTCTaGCACTTTAATTTTATAGCTGAAGAGACCTTTGCT +
Preference number: 6 (lower is better)
Translates to: DRTKRDLRHHLV*HFNFIAEETFA
Trigger: AGCAAAGGTCTCTTCAGCTATAAAATTAAAGTGTCAGACTAGATGGTGTCTAAGGTCCCTTTTAGTTCTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000682380.1
ENST00000682750.1
CDS TCA 72 bp CTGAGCTTCAATAAAGACTTCAGTGAAGAAACCATATaGGCGTCTACTAAAATAGGCCAAGTTCTCAAAAAG +
Preference number: 6 (lower is better)
Translates to: LSFNKDFSEETI*ASTKIGQVLKK
Trigger: CTTTTTGAGAACTTGGCCTATTTTAGTAGACGCTCATATGGTTTCTTCACTGAAGTCTTTATTGAAGCTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000683216.1
ENST00000683688.1
CDS CCA 72 bp ACAAATCTCATAAGTGGCAGAATGGAACTAGAACTCTaGCATCTACAGTCTTGGCTCAATGTAATTGTAAAA +
Preference number: 6 (lower is better)
Translates to: TNLISGRMELEL*HLQSWLNVIVK
Trigger: TTTTACAATTACATTGAGCCAAGACTGTAGATGCCAGAGTTCTAGTTCCATTCTGCCACTTATGAGATTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682380.1
ENST00000682750.1
CDS CAA 72 bp TCTTCAGTCTCTTTGGCTTTTCTGACTTTGATAATTTaGGATATACAGCAGTTACTTTGTAGACTGCCCTTC +
Preference number: 6 (lower is better)
Translates to: SSVSLAFLTLII*DIQQLLCRLPF
Trigger: GAAGGGCAGTCTACAAAGTAACTGCTGTATATCCAAAATTATCAAAGTCAGAAAAGCCAAAGAGACTGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683216.1
ENST00000683688.1
CDS GCA 72 bp TATGTAGGTCAGTTTCTGGGATACCTTAGTTACCTATaGATGAATTACTTTTACTTTGATCAAGTCCACTGT +
Preference number: 6 (lower is better)
Translates to: YVGQFLGYLSYL*MNYFYFDQVHC
Trigger: ACAGTGGACTTGATCAAAGTAAAAGTAATTCATGCATAGGTAACTAAGGTATCCCAGAAACTGACCTACATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684394.1
CDS CAA 72 bp ACTGTTTATGACGTGCCAGGTCTTACGTTAATCATGTaGTGCATATTATCTCAATCTTCAAAACAAGCTTGT +
Preference number: 6 (lower is better)
Translates to: TVYDVPGLTLIM*CILSQSSKQAC
Trigger: ACAAGCTTGTTTTGAAGATTGAGATAATATGCACAACATGATTAACGTAAGACCTGGCACGTCATAAACAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682041.1
CDS CAA 72 bp TTCCTCCACCTCCATTTAAGATGCTTTTACTATGACTaGGTTAAGATTACCTTAAGGTGTTTCCAACTACAT +
Preference number: 6 (lower is better)
Translates to: FLHLHLRCFYYD*VKITLRCFQLH
Trigger: ATGTAGTTGGAAACACCTTAAGGTAATCTTAACCAAGTCATAGTAAAAGCATCTTAAATGGAGGTGGAGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683688.1
CDS TCA 72 bp CTAATGAGAACAACAGTCTCTGAATTCTTGTGTTGTTaGCAATTTATCCGTCCTTTTTGTATTATCTCCCTT +
Preference number: 6 (lower is better)
Translates to: LMRTTVSEFLCC*QFIRPFCIISL
Trigger: AAGGGAGATAATACAAAAAGGACGGATAAATTGTCAACAACACAAGAATTCAGAGACTGTTGTTCTCATTAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675452.2
CDS TCA 72 bp GGTTTTGTACGGTCTTTTAAGAGTAATGCAGTGTTATaGCGAATTGTAAGTAGGAGAATATGTTCAGAATTG +
Preference number: 6 (lower is better)
Translates to: GFVRSFKSNAVL*RIVSRRICSEL
Trigger: CAATTCTGAACATATTCTCCTACTTACAATTCGTCATAACACTGCATTACTCTTAAAAGACCGTACAAAACC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682041.1
CDS CAA 72 bp CATGTTGTGCATATTATCTCAATCTTCAAAACAAGCTaGTTAGGTAGGTACTATTGTTCCCATTGTATAGCT +
Preference number: 6 (lower is better)
Translates to: HVVHIISIFKTS*LGRYYCSHCIA
Trigger: AGCTATACAATGGGAACAATAGTACCTACCTAACAAGCTTGTTTTGAAGATTGAGATAATATGCACAACATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682041.1