RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ERCC6 (Homo sapiens)

Ensembl gene IDs: ENSG00000225830

Ensembl transcript IDs: ENST00000355832.10, ENST00000447839.7, ENST00000462247.1, ENST00000465653.1, ENST00000475116.1, ENST00000479652.1, ENST00000515869.1, ENST00000623073.3, ENST00000623115.3, ENST00000623318.1, ENST00000623788.1, ENST00000624341.3, ENST00000679552.1, ENST00000679596.1, ENST00000679811.1, ENST00000679974.1, ENST00000680107.1, ENST00000680233.1, ENST00000681632.1, ENST00000681659.1

Found 1152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGCCAGTCCAGGTGGGAACACCAGACACTGCTCCCAGACACCGCTaGCGAGAGAGCCTCAGTGCTTTCAGGGCATCCTGGGCCACTCGG +
Preference number: 1 (lower is better)
Translates to: WPVQVGTPDTAPRHR*RESLSAFRASWATR
Trigger: CCGAGTGGCCCAGGATGCCCTGAAAGCACTGAGGCTCTCTCGTCAGCGGTGTCTGGGAGCAGTGTCTGGTGTTCCCACCTGGACTGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR GCA 90 bp AACACCAGACACTGCTCCCAGACACCGCTGACGAGAGAGCCTCAGTaGTTTCAGGGCATCCTGGGCCACTCGGTTGGCTTCTGCCTCCAC +
Preference number: 1 (lower is better)
Translates to: NTRHCSQTPLTREPQ*FQGILGHSVGFCLH
Trigger: GTGGAGGCAGAAGCCAACCGAGTGGCCCAGGATGCCCTGAAAGCACTGAGGCTCTCTCGTCAGCGGTGTCTGGGAGCAGTGTCTGGTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR GCA 90 bp ACCAGAAATCCCCCTGTGGCCAGTCCAGGTGGGAACACCAGACACTaGTCCCAGACACCGCTGACGAGAGAGCCTCAGTGCTTTCAGGGC +
Preference number: 1 (lower is better)
Translates to: TRNPPVASPGGNTRH*SQTPLTREPQCFQG
Trigger: GCCCTGAAAGCACTGAGGCTCTCTCGTCAGCGGTGTCTGGGAGCAGTGTCTGGTGTTCCCACCTGGACTGGCCACAGGGGGATTTCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR CCA 90 bp CCTTCTCCACGTCAACGAGCTGGGAGGCACGGCTGGCCTCATGGATaGCATTGTCCACCTGCTGAAGCACTCCCTGTTCCAGCACGTCCT +
Preference number: 1 (lower is better)
Translates to: PSPRQRAGRHGWPHG*HCPPAEALPVPARP
Trigger: AGGACGTGCTGGAACAGGGAGTGCTTCAGCAGGTGGACAATGCCATCCATGAGGCCAGCCGTGCCTCCCAGCTCGTTGACGTGGAGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR CCA 90 bp GGAGAGAAGACAGCCTGCCAGCCTGCAGACAAGAGAGGCCTGGAGTaGTGTCACTTCATGGTAACAACGGCTGGGTCTGCTGTGGGCTGC +
Preference number: 1 (lower is better)
Translates to: GEKTACQPADKRGLE*CHFMVTTAGSAVGC
Trigger: GCAGCCCACAGCAGACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR CCA 90 bp AGCCCGTCGCAAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTaGAGAGAAGACAGCCTGCCAGCCTGCAGACAAGAGAGGCCTGGA +
Preference number: 1 (lower is better)
Translates to: SPSQGMQRQAQDEGN*REDSLPACRQERPG
Trigger: TCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTTGCGACGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR CCA 90 bp ATGGTGCCCGCAGTCAGGAGCCTGTACACAGTCACTTGCTTCTTCTaGCCTATTCTCCATGCTCGCTCCCGGGCCTGCGTGTCCGTGCTT +
Preference number: 1 (lower is better)
Translates to: MVPAVRSLYTVTCFF*PILHARSRACVSVL
Trigger: AAGCACGGACACGCAGGCCCGGGAGCGAGCATGGAGAATAGGCCAGAAGAAGCAAGTGACTGTGTACAGGCTCCTGACTGCGGGCACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR CCA 90 bp CCGACCGATACTCCTTCTCCACGTCAACGAGCTGGGAGGCACGGCTaGCCTCATGGATGGCATTGTCCACCTGCTGAAGCACTCCCTGTT +
Preference number: 1 (lower is better)
Translates to: PTDTPSPRQRAGRHG*PHGWHCPPAEALPV
Trigger: AACAGGGAGTGCTTCAGCAGGTGGACAATGCCATCCATGAGGCCAGCCGTGCCTCCCAGCTCGTTGACGTGGAGAAGGAGTATCGGTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR GCA 90 bp GAGCCTCAGTGCTTTCAGGGCATCCTGGGCCACTCGGTTGGCTTCTaGCTCCACCAGTACATAATCTGGGCTGGCTCCATCCATGATGGC +
Preference number: 1 (lower is better)
Translates to: EPQCFQGILGHSVGF*LHQYIIWAGSIHDG
Trigger: GCCATCATGGATGGAGCCAGCCCAGATTATGTACTGGTGGAGGCAGAAGCCAACCGAGTGGCCCAGGATGCCCTGAAAGCACTGAGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR GCA 90 bp TGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTaGCAGCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATG +
Preference number: 1 (lower is better)
Translates to: CKGRRKTKATGEKTA*QPADKRGLEWCHFM
Trigger: CATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR TCA 90 bp AGACTCTTCACCCTCAGAGTCTCCCTCTGCCTCTGGCCTCATGTCTaGCTCCCAAGGTCTCCTTGCCTTTGGCAATCCCACTTTCCCCTG +
Preference number: 1 (lower is better)
Translates to: RLFTLRVSLCLWPHV*LPRSPCLWQSHFPL
Trigger: CAGGGGAAAGTGGGATTGCCAAAGGCAAGGAGACCTTGGGAGTCAGACATGAGGCCAGAGGCAGAGGGAGACTCTGAGGGTGAAGAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR CCA 90 bp CATACCTCTGGACAGGGAGCTGAGGGAGACGGAGCTCTGTTTTCTTaGCTGCACCCACTGAAATGGGAGGGAGGGAGTGAGTGTGTTGTG +
Preference number: 1 (lower is better)
Translates to: HTSGQGAEGDGALFS*LHPLKWEGGSECVV
Trigger: CACAACACACTCACTCCCTCCCTCCCATTTCAGTGGGTGCAGCCAAGAAAACAGAGCTCCGTCTCCCTCAGCTCCCTGTCCAGAGGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681659.1
3UTR GCA 90 bp GGCTGGAATCCAAACCGCAGAAACAAGAAAGCCCGTCGCAAGGAATaGAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCC +
Preference number: 1 (lower is better)
Translates to: GWNPNRRNKKARRKE*KGRRKTKATGEKTA
Trigger: GGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTTGCGACGGGCTTTCTTGTTTCTGCGGTTTGGATTCCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR CCA 90 bp ATCCTGGGCCACTCGGTTGGCTTCTGCCTCCACCAGTACATAATCTaGGCTGGCTCCATCCATGATGGCATCGTGCTTCATGACACTGTG +
Preference number: 1 (lower is better)
Translates to: ILGHSVGFCLHQYII*AGSIHDGIVLHDTV
Trigger: CACAGTGTCATGAAGCACGATGCCATCATGGATGGAGCCAGCCCAGATTATGTACTGGTGGAGGCAGAAGCCAACCGAGTGGCCCAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR TCA 90 bp CTGGCAGGCCAACTTCTCCTTCCTCAACACATCACTTCCATCTCTTaGGATGCCAGGTCACTACTGAAGCTCCCATTGGCCTCCCAGCCA +
Preference number: 1 (lower is better)
Translates to: LAGQLLLPQHITSIS*DARSLLKLPLASQP
Trigger: TGGCTGGGAGGCCAATGGGAGCTTCAGTAGTGACCTGGCATCTCAAGAGATGGAAGTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR CCA 90 bp TCAAACTCCTGCAGTATCTCCCTGGTGCTGGCCTGGCCATCAGTGTaGGCCTGGAAAGCGATGAAGTTTCTCATCTCCACCAGAAGGTCA +
Preference number: 1 (lower is better)
Translates to: SNSCSISLVLAWPSV*AWKAMKFLISTRRS
Trigger: TGACCTTCTGGTGGAGATGAGAAACTTCATCGCTTTCCAGGCCCACACTGATGGCCAGGCCAGCACCAGGGAGATACTGCAGGAGTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR GCA 90 bp AGGCCAACTTCTCCTTCCTCAACACATCACTTCCATCTCTTGAGATaGCAGGTCACTACTGAAGCTCCCATTGGCCTCCCAGCCAGCAAG +
Preference number: 1 (lower is better)
Translates to: RPTSPSSTHHFHLLR*QVTTEAPIGLPASK
Trigger: CTTGCTGGCTGGGAGGCCAATGGGAGCTTCAGTAGTGACCTGGCATCTCAAGAGATGGAAGTGATGTGTTGAGGAAGGAGAAGTTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR GCA 90 bp TCAGCTTCTTCCCCAGAACTTGGGAAAAAGTCATCATCAATCTCCTaGACTGGCACTTTCTTCTGCCGTTTCCCGCCCTTGGGCAGAGGC +
Preference number: 1 (lower is better)
Translates to: SASSPELGKKSSSIS*TGTFFCRFPPLGRG
Trigger: GCCTCTGCCCAAGGGCGGGAAACGGCAGAAGAAAGTGCCAGTGCAGGAGATTGATGATGACTTTTTCCCAAGTTCTGGGGAAGAAGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR CCA 90 bp TTCTTCCCCAGAACTTGGGAAAAAGTCATCATCAATCTCCTGCACTaGCACTTTCTTCTGCCGTTTCCCGCCCTTGGGCAGAGGCTTCAG +
Preference number: 1 (lower is better)
Translates to: FFPRTWEKVIINLLH*HFLLPFPALGQRLQ
Trigger: CTGAAGCCTCTGCCCAAGGGCGGGAAACGGCAGAAGAAAGTGCCAGTGCAGGAGATTGATGATGACTTTTTCCCAAGTTCTGGGGAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR TCA 90 bp TTCCTCAACACATCACTTCCATCTCTTGAGATGCCAGGTCACTACTaGAGCTCCCATTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCA +
Preference number: 1 (lower is better)
Translates to: FLNTSLPSLEMPGHY*SSHWPPSQQERGMS
Trigger: TGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAATGGGAGCTTCAGTAGTGACCTGGCATCTCAAGAGATGGAAGTGATGTGTTGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR CCA 90 bp TCTGACTCCCAAGGTCTCCTTGCCTTTGGCAATCCCACTTTCCCCTaGAACTGCAAAGCCCTCTTCTGGAGTTTCTTGATGTGCTTTTTC +
Preference number: 1 (lower is better)
Translates to: SDSQGLLAFGNPTFP*NCKALFWSFLMCFF
Trigger: GAAAAAGCACATCAAGAAACTCCAGAAGAGGGCTTTGCAGTTCCAGGGGAAAGTGGGATTGCCAAAGGCAAGGAGACCTTGGGAGTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR GCA 90 bp CCCATTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTaGATACCCTGCTTCTTTAAAGGGCCAATTGGGAAGTTTAAAACT +
Preference number: 1 (lower is better)
Translates to: PIGLPASKKGECQGE*IPCFFKGPIGKFKT
Trigger: AGTTTTAAACTTCCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR CCA 90 bp TTCTCAATAGTTCTCGGAAGACACAAGACTGTGATGCAGATAACTTaGATTCAAACTCCTGCAGTATCTCCCTGGTGCTGGCCTGGCCAT +
Preference number: 1 (lower is better)
Translates to: FSIVLGRHKTVMQIT*IQTPAVSPWCWPGH
Trigger: ATGGCCAGGCCAGCACCAGGGAGATACTGCAGGAGTTTGAATCCAAGTTATCTGCATCACAGTCTTGTGTCTTCCGAGAACTATTGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR CCA 90 bp TCCTCCTTCTCCTACAGAAGCAGCTTCAGCTTCTTCCCCAGAACTTaGGAAAAAGTCATCATCAATCTCCTGCACTGGCACTTTCTTCTG +
Preference number: 1 (lower is better)
Translates to: SSFSYRSSFSFFPRT*EKVIINLLHWHFLL
Trigger: CAGAAGAAAGTGCCAGTGCAGGAGATTGATGATGACTTTTTCCCAAGTTCTGGGGAAGAAGCTGAAGCTGCTTCTGTAGGAGAAGGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR CCA 90 bp AAACTTGGCGTCTCTGCAATGCTTAGAGTTCTTAGGCTTTTGCTTTaGTCTCAGATGTTTCTCCAGGGTCTCTTCTTCTGCCACACTATG +
Preference number: 1 (lower is better)
Translates to: KLGVSAMLRVLRLLL*SQMFLQGLFFCHTM
Trigger: CATAGTGTGGCAGAAGAAGAGACCCTGGAGAAACATCTGAGACCAAAGCAAAAGCCTAAGAACTCTAAGCATTGCAGAGACGCCAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR CCA 90 bp GTTTTCACTGTCTTGCTTCTGGTAACGCCTTTTCTTCACCAGGTGTaGAATTCGAGTTCCTTCAAACTTGGCGTCTCTGCAATGCTTAGA +
Preference number: 1 (lower is better)
Translates to: VFTVLLLVTPFLHQV*NSSSFKLGVSAMLR
Trigger: TCTAAGCATTGCAGAGACGCCAAGTTTGAAGGAACTCGAATTCCACACCTGGTGAAGAAAAGGCGTTACCAGAAGCAAGACAGTGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR CCA 90 bp GGTCTGCTCCAAAGGCTGGTTGAATCCTTCTTTTTAGATGGCATTTaGGTGTCTGAACATCTGATCCAGTTCCTGCAAAAATTGCACTTG +
Preference number: 1 (lower is better)
Translates to: GLLQRLVESFFLDGI*VSEHLIQFLQKLHL
Trigger: CAAGTGCAATTTTTGCAGGAACTGGATCAGATGTTCAGACACCCAAATGCCATCTAAAAAGAAGGATTCAACCAGCCTTTGGAGCAGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR GCA 90 bp GCAGAACTGAGACAAAAACTGGAACAAGGACCACCTTGCTCCTACTaGATTATAGCTTTTGATAGTATTTGCTACTTGAAGAGGAGGCTA +
Preference number: 1 (lower is better)
Translates to: AELRQKLEQGPPCSY*IIAFDSICYLKRRL
Trigger: TAGCCTCCTCTTCAAGTAGCAAATACTATCAAAAGCTATAATGCAGTAGGAGCAAGGTGGTCCTTGTTCCAGTTTTTGTCTCAGTTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR GCA 90 bp ATGATGCCATCCTGGCACTTCTCTGTTGGAGATGTTGATGAAGGATaGTGCACAGAGAAGTTAGAATTCCTTTTCTTACCAAATCTACTC +
Preference number: 1 (lower is better)
Translates to: MMPSWHFSVGDVDEG*CTEKLEFLFLPNLL
Trigger: GAGTAGATTTGGTAAGAAAAGGAATTCTAACTTCTCTGTGCAGCATCCTTCATCAACATCTCCAACAGAGAAGTGCCAGGATGGCATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR CCA 90 bp GGCATCATTTACAGATATGTTAGAAGCAGGGAACTTCTTGCGTTTTaGAACATCATGGTCTGCTCCAAAGGCTGGTTGAATCCTTCTTTT +
Preference number: 1 (lower is better)
Translates to: GIIYRYVRSRELLAF*NIMVCSKGWLNPSF
Trigger: AAAAGAAGGATTCAACCAGCCTTTGGAGCAGACCATGATGTTCCAAAACGCAAGAAGTTCCCTGCTTCTAACATATCTGTAAATGATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR GCA 90 bp ATGCCATCCTGGCACTTCTCTGTTGGAGATGTTGATGAAGGATGCTaGACAGAGAAGTTAGAATTCCTTTTCTTACCAAATCTACTCTTT +
Preference number: 1 (lower is better)
Translates to: MPSWHFSVGDVDEGC*TEKLEFLFLPNLLF
Trigger: AAAGAGTAGATTTGGTAAGAAAAGGAATTCTAACTTCTCTGTGCAGCATCCTTCATCAACATCTCCAACAGAGAAGTGCCAGGATGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR CCA 90 bp TATTCTGGCTTGAGTTTCCAAATTCCTTCACCACCAGAAGTTCTATaGAAAGTGCACAGATTTCTCAATAGTTCTCGGAAGACACAAGAC +
Preference number: 1 (lower is better)
Translates to: YSGLSFQIPSPPEVL*KVHRFLNSSRKTQD
Trigger: GTCTTGTGTCTTCCGAGAACTATTGAGAAATCTGTGCACTTTCCATAGAACTTCTGGTGGTGAAGGAATTTGGAAACTCAAGCCAGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR TCA 90 bp GACTCAACAACAATCATTTTCCCAGAACGTTTCCAGTACCCAAACTaGTCTTCTTCTAGTTCATCATCAGGAAGACCTTTGAGATTCTTG +
Preference number: 1 (lower is better)
Translates to: DSTTIIFPERFQYPN*SSSSSSSGRPLRFL
Trigger: CAAGAATCTCAAAGGTCTTCCTGATGATGAACTAGAAGAAGATCAGTTTGGGTACTGGAAACGTTCTGGGAAAATGATTGTTGTTGAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR GCA 90 bp CTCAATACAGTTTATGTTTCAGACACTATAAGTATGATACCCAAATaGTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGG +
Preference number: 1 (lower is better)
Translates to: LNTVYVSDTISMIPK*FMSEQGQQITLRTR
Trigger: CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTATCATACTTATAGTGTCTGAAACATAAACTGTATTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR CCA 90 bp GGCCAACATAACACTAATAGGCAATGTACGGTAGAGATCTACAAATaGCCAATAAACATGGAAATGTTTGATTTTGTACGTAATCAGGGA +
Preference number: 1 (lower is better)
Translates to: GQHNTNRQCTVEIYK*PINMEMFDFVRNQG
Trigger: TCCCTGATTACGTACAAAATCAAACATTTCCATGTTTATTGGCCATTTGTAGATCTCTACCGTACATTGCCTATTAGTGTTATGTTGGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR GCA 90 bp GAGAGGAAAAGAGCATGCCAGAGAATACAAATCCAAGAAACAAACTaGACTAAGACAGCTAAGAAGAAATTTCAGGAATACGATGAATTT +
Preference number: 1 (lower is better)
Translates to: ERKRACQRIQIQETN*TKTAKKKFQEYDEF
Trigger: AAATTCATCGTATTCCTGAAATTTCTTCTTAGCTGTCTTAGTGCAGTTTGTTTCTTGGATTTGTATTCTCTGGCATGCTCTTTTCCTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp AACACCAGACACTGCTCCCAGACACCGCTGACGAGAGAGCCTCAGTGCTTTCAGTTGCCCCCGTCAGGTTaGCACCTAAGCCGCCCACCC +
Preference number: 2 (lower is better)
Translates to: NTRHCSQTPLTREPQCFQLPPSG*HLSRPP
Trigger: GGGTGGGCGGCTTAGGTGTCAACCTGACGGGGGCAA...CTGAAAGCACTGAGGCTCTCTCGTCAGCGGTGTCTGGGAGCAGTGTCTGGTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR GCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGACAGCCTGCCAGCCTaGAGACAAGAGAGGCCTGGA +
Preference number: 2 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWDSLPA*RQERPG
Trigger: TCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTC...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR GCA 90 bp TGGGCAGCAGGGCAGAAGCTTCCTGCAGGTGCCCGCTTTCACTTTCTAAACGCTGACAGCCTGCCAGCCTaGAGACAAGAGAGGCCTGGA +
Preference number: 2 (lower is better)
Translates to: WAAGQKLPAGARFHFLNADSLPA*RQERPG
Trigger: TCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTC...AGCGTTTAGAAAGTGAAAGCGGGCACCTGCAGGAAGCTTCTGCCCTGCTGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR GCA 90 bp CTGAGGGATCTGGGTACCAAAAGGTGTCATCTGGCCAGTGCGGATGAGCTCTTCTCCACACCCAAACCCTaGAGCTCAAGGGCCTGGGCG +
Preference number: 2 (lower is better)
Translates to: LRDLGTKRCHLASADELFSTPKP*SSRAWA
Trigger: CGCCCAGGCCCTTGAGCTGCAGGGTTTGGGTGTGGA...GAAGAGCTCATCCGCACTGGCCAGATGACACCTTTTGGTACCCAGATCCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR-3UTR TCA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTAGCGAGGGGCCCGGATaGAGAGTCTGCATCTTCTGC +
Preference number: 2 (lower is better)
Translates to: PARRHGNNVSDLHTETPPSEGPG*RVCIFC
Trigger: GCAGAAGATGCAGACTCTTCATCCGGGCCCCTCGCT...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGCATGGTAACAACGGCTaGGTCTGCTGTGGGCTGCAG +
Preference number: 2 (lower is better)
Translates to: ECKGRRKTKATGEKTACQHGNNG*VCCGLQ
Trigger: CTGCAGCCCACAGCAGACCCAGCCGTTGTTACCATG...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CCA 90 bp ATCTGGGTACCAAAAGGTGTCATCTGGCCAGTGCGGATGAGCTCTTCCCAGGCAGCACGGCTGGCCTCATaGATGGCATTGTCCACCTGC +
Preference number: 2 (lower is better)
Translates to: IWVPKGVIWPVRMSSSQAARLAS*MALSTC
Trigger: GCAGGTGGACAATGCCATCCATGAGGCCAGCCGTGC...TGCCTGGGAAGAGCTCATCCGCACTGGCCAGATGACACCTTTTGGTACCCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR-3UTR CCA 90 bp ATCTGGGTACCAAAAGGTGTCATCTGGCCAGTGCGGATGAGCTCTTCCCAGGCAGCTGGGAGGCACGGCTaGCCTCATGGATGGCATTGT +
Preference number: 2 (lower is better)
Translates to: IWVPKGVIWPVRMSSSQAAGRHG*PHGWHC
Trigger: ACAATGCCATCCATGAGGCCAGCCGTGCCTCCCAGC...TGCCTGGGAAGAGCTCATCCGCACTGGCCAGATGACACCTTTTGGTACCCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR-3UTR CCA 90 bp GGGAAATACTCAGACTCTTCACCCTCAGAGTCTCCCTCTGCCTCTGGCCTCATGGCATGCTGCCAAGACTaGATGGCCCCGGCTCTGCAT +
Preference number: 2 (lower is better)
Translates to: GKYSDSSPSESPSASGLMACCQD*MAPALH
Trigger: ATGCAGAGCCGGGGCCATCCAGTCTTGGCAGCATGC...CATGAGGCCAGAGGCAGAGGGAGACTCTGAGGGTGAAGAGTCTGAGTATTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR-3UTR TCA 90 bp GGGAAATACTCAGACTCTTCACCCTCAGAGTCTCCCTCTGCCTCTGGCCTCATGGCATTGTCCACCTGCTaGAGCACTCCCTGTTCCAGC +
Preference number: 2 (lower is better)
Translates to: GKYSDSSPSESPSASGLMALSTC*STPCSS
Trigger: GCTGGAACAGGGAGTGCTTCAGCAGGTGGACAATGC...CATGAGGCCAGAGGCAGAGGGAGACTCTGAGGGTGAAGAGTCTGAGTATTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR-3UTR GCA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTACGAGAGAGCCTCAGTaGTTTCAGGGCATCCTGGGC +
Preference number: 2 (lower is better)
Translates to: PARRHGNNVSDLHTETPPTREPQ*FQGILG
Trigger: GCCCAGGATGCCCTGAAAGCACTGAGGCTCTCTCGT...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTCATGGTAACAACGGCTaGGTCTGCTGTGGGCTGCAG +
Preference number: 2 (lower is better)
Translates to: LASQPARKGNVKESAYPAHGNNG*VCCGLQ
Trigger: CTGCAGCCCACAGCAGACCCAGCCGTTGTTACCATG...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR CAA 90 bp AGCTCTTGCCACTTGAAGCTGGAGGGGATAAGAAATGCTGGCATCTaGCCCCTCCCTGTGAGGTACCATACCTCTGGACAGGGAGCTGAG +
Preference number: 2 (lower is better)
Translates to: SSCHLKLEGIRNAGI*PLPVRYHTSGQGAE
Trigger: CTCAGCTCCCTGTCCAGAGGTATGGTACCTCACAGGGAGGGGCAAGATGCCAGCATTTCTTATCCCCTCCAGCTTCAAGTGGCAAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681659.1
3UTR-3UTR TCA 90 bp AACACCAGACACTGCTCCCAGACACCGCTGACGAGAGAGCCTCAGTGCTTTCAGCAGAACCCTCCTCTCTaGGTCACATGGATGAGCAGA +
Preference number: 2 (lower is better)
Translates to: NTRHCSQTPLTREPQCFQQNPPL*VTWMSR
Trigger: TCTGCTCATCCATGTGACTCAGAGAGGAGGGTTCTG...CTGAAAGCACTGAGGCTCTCTCGTCAGCGGTGTCTGGGAGCAGTGTCTGGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR GCA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTGCAGTATCTCCCTGGTaGTGGCCTGGCCATCAGTGT +
Preference number: 2 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLAVSPW*WPGHQC
Trigger: ACACTGATGGCCAGGCCAGCACCAGGGAGATACTGC...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGCAAGACGAAGGCAACTaGAGAGAAGACAGCCTGCCA +
Preference number: 2 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWQDEGN*REDSLP
Trigger: TGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTG...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CCA 90 bp AACACCAGACACTGCTCCCAGACACCGCTGACGAGAGAGCCTCAGTGCTTTCAGCAAGACGAAGGCAACTaGAGAGAAGACAGCCTGCCA +
Preference number: 2 (lower is better)
Translates to: NTRHCSQTPLTREPQCFQQDEGN*REDSLP
Trigger: TGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTG...CTGAAAGCACTGAGGCTCTCTCGTCAGCGGTGTCTGGGAGCAGTGTCTGGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR CAA 90 bp ACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACTTCCATCTCTaGAGATGCCAGGTCACTACTGAAGCTCCCATTGGCCTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: TGRPTSPSSTHHFHL*RCQVTTEAPIGLPA
Trigger: GGCTGGGAGGCCAATGGGAGCTTCAGTAGTGACCTGGCATCTCAAGAGATGGAAGTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTCAGAACCCTCCTCTCTaGGTCACATGGATGAGCAGA +
Preference number: 2 (lower is better)
Translates to: LASQPARKGNVKESAYPAQNPPL*VTWMSR
Trigger: TCTGCTCATCCATGTGACTCAGAGAGGAGGGTTCTG...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR GCA 90 bp AGAAGACAGCCTGCCAGCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCACACTCGGTTGGCTTCTaGCTCCACCAGTACATAATC +
Preference number: 2 (lower is better)
Translates to: RRQPASLQTREAWSGVTSHSVGF*LHQYII
Trigger: GATTATGTACTGGTGGAGGCAGAAGCCAACCGAGTG...TGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR GCA 90 bp ATAATCTTCATCTCCATCATCTCGGTATCTTCCCACTTTCCGACCTCCTCCTCCAGACAGGTCCGCCTCTaGCCCCTCCACCTCGTCATC +
Preference number: 2 (lower is better)
Translates to: IIFISIISVSSHFPTSSSRQVRL*PLHLVI
Trigger: GATGACGAGGTGGAGGGGGCAGAGGCGGACCTGTCT...GGAGGAGGAGGTCGGAAAGTGGGAAGATACCGAGATGATGGAGATGAAGATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR-3UTR CCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGAGAGCAGTTCAAGACTaGCAGGCCAACTTCTCCTTC +
Preference number: 2 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWRAVQD*QANFSF
Trigger: GAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCT...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCACTTGCTTCTTCTaGCCTATTCTCCATGCTCGC +
Preference number: 2 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWVTCFF*PILHAR
Trigger: GCGAGCATGGAGAATAGGCCAGAAGAAGCAAGTGAC...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR TCA 90 bp CCCTGTGGCCAGTCCAGGTGGGAACACCAGACACTGCTCCCAGACACCGCTGACGGTAAGAAAATAAACTaGGGATCAAAGCAACACCAT +
Preference number: 2 (lower is better)
Translates to: PCGQSRWEHQTLLPDTADGKKIN*GSKQHH
Trigger: ATGGTGTTGCTTTGATCCTCAGTTTATTTTCTTACC...GTCAGCGGTGTCTGGGAGCAGTGTCTGGTGTTCCCACCTGGACTGGCCACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR TCA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTGAAGTAGTCTTAAGCTaGGCAGCCAGACGTCCAGGT +
Preference number: 2 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLEVVLS*AARRPG
Trigger: ACCTGGACGTCTGGCTGCTCAGCTTAAGACTACTTC...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp ATAATCTTCATCTCCATCATCTCGGTATCTTCCCACTTTCCGACCTCCTCCTCCTCTGGCCAGTGCGGATaGGCTCTTCCCAGGCAGTCT +
Preference number: 2 (lower is better)
Translates to: IIFISIISVSSHFPTSSSSGQCG*ALPRQS
Trigger: AGACTGCCTGGGAAGAGCTCATCCGCACTGGCCAGA...GGAGGAGGAGGTCGGAAAGTGGGAAGATACCGAGATGATGGAGATGAAGATTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR-3UTR GCA 90 bp GCTTCAGCTCATAGTCAGTACCATCTCCAGACAGGTCCGCCTCTGCCCCCTCCAAGGATGGCCTGGAGATaGTTTTGTTTTGCAGTGATC +
Preference number: 2 (lower is better)
Translates to: ASAHSQYHLQTGPPLPPPRMAWR*FCFAVI
Trigger: GATCACTGCAAAACAAAAGCATCTCCAGGCCATCCT...TGGAGGGGGCAGAGGCGGACCTGTCTGGAGATGGTACTGACTATGAGCTGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR-3UTR CCA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTCAGACAAGAGAGGCCTaGAGTGGTGTCACTTCATGG +
Preference number: 2 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLQTREA*SGVTSW
Trigger: CCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTG...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CCA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTAGAGCAGTTCAAGACTaGCAGGCCAACTTCTCCTTC +
Preference number: 2 (lower is better)
Translates to: PARRHGNNVSDLHTETPPRAVQD*QANFSF
Trigger: GAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCT...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CCA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTAGATCTTTTCTTCAATaGTGCCCGCAGTCAGGAGCC +
Preference number: 2 (lower is better)
Translates to: PARRHGNNVSDLHTETPPRSFLQ*CPQSGA
Trigger: GGCTCCTGACTGCGGGCACCATTGAAGAAAAGATCT...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CCA 90 bp TGGGCAGCAGGGCAGAAGCTTCCTGCAGGTGCCCGCTTTCACTTTCTAAACGCTCTTGTTTCAGTGCTCTaGGATGCATCAGGACTAGTC +
Preference number: 2 (lower is better)
Translates to: WAAGQKLPAGARFHFLNALVSVL*DASGLV
Trigger: GACTAGTCCTGATGCATCCCAGAGCACTGAAACAAG...AGCGTTTAGAAAGTGAAAGCGGGCACCTGCAGGAAGCTTCTGCCCTGCTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CCA 90 bp TGGGCAGCAGGGCAGAAGCTTCCTGCAGGTGCCCGCTTTCACTTTCTAAACGCTCACCAGTACATAATCTaGGCTGGCTCCATCCATGAT +
Preference number: 2 (lower is better)
Translates to: WAAGQKLPAGARFHFLNAHQYII*AGSIHD
Trigger: ATCATGGATGGAGCCAGCCCAGATTATGTACTGGTG...AGCGTTTAGAAAGTGAAAGCGGGCACCTGCAGGAAGCTTCTGCCCTGCTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CCA 90 bp GCTTCAGCTCATAGTCAGTACCATCTCCAGACAGGTCCGCCTCTGCCCCCTCCACATCCTCCTCCAGACTaGCGTGATCTAGTTCAATTT +
Preference number: 2 (lower is better)
Translates to: ASAHSQYHLQTGPPLPPPHPPPD*RDLVQF
Trigger: AAATTGAACTAGATCACGCCAGTCTGGAGGAGGATG...TGGAGGGGGCAGAGGCGGACCTGTCTGGAGATGGTACTGACTATGAGCTGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR-3UTR TCA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTATCACTTCCATCTCTTaGGATGCCAGGTCACTACTG +
Preference number: 2 (lower is better)
Translates to: PARRHGNNVSDLHTETPPITSIS*DARSLL
Trigger: CAGTAGTGACCTGGCATCTCAAGAGATGGAAGTGAT...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTCACCAAATGACAGCGTaGGGAGTGTGGTTGGTAGAA +
Preference number: 2 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLHQMTA*GVWLVE
Trigger: TTCTACCAACCACACTCCTCACGCTGTCATTTGGTG...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTAACAGCAATACTCGCTaGCCCTGCTTGTGCCATATT +
Preference number: 2 (lower is better)
Translates to: LASQPARKGNVKESAYPANSNTR*PCLCHI
Trigger: AATATGGCACAAGCAGGGTCAGCGAGTATTGCTGTT...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR TCA 90 bp GGGAAATACTCAGACTCTTCACCCTCAGAGTCTCCCTCTGCCTCTGGCCTCATGTCCTCCAGACTGGCGTaGTCTAGTTCAATTTTCACC +
Preference number: 2 (lower is better)
Translates to: GKYSDSSPSESPSASGLMSSRLA*SSSIFT
Trigger: GGTGAAAATTGAACTAGATCACGCCAGTCTGGAGGA...CATGAGGCCAGAGGCAGAGGGAGACTCTGAGGGTGAAGAGTCTGAGTATTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR-3UTR TCA 90 bp GCTTCAGCTCATAGTCAGTACCATCTCCAGACAGGTCCGCCTCTGCCCCCTCCATTTTTCTCCTGTTTCTaGGGGATCTGGGTACCAAAA +
Preference number: 2 (lower is better)
Translates to: ASAHSQYHLQTGPPLPPPFFSCF*GIWVPK
Trigger: TTTTGGTACCCAGATCCCTCAGAAACAGGAGAAAAA...TGGAGGGGGCAGAGGCGGACCTGTCTGGAGATGGTACTGACTATGAGCTGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR-3UTR CCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCAAGAGAGGCCTGGAGTaGTGTCACTTCATGGTAACA +
Preference number: 2 (lower is better)
Translates to: KECKGRRKTKATGEKTACKRGLE*CHFMVT
Trigger: TGTTACCATGAAGTGACACCACTCCAGGCCTCTCTT...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCCGTTTTGGAACATCATaGTCTGCTCCAAAGGCTGGT +
Preference number: 2 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVRFGTS*SAPKAG
Trigger: ACCAGCCTTTGGAGCAGACCATGATGTTCCAAAACG...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CCA 90 bp AGAAGACAGCCTGCCAGCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCACTGTTTGAGCCTGGCTaGGTCTTTCTCTTTTGTAAG +
Preference number: 2 (lower is better)
Translates to: RRQPASLQTREAWSGVTSLFEPG*VFLFCK
Trigger: CTTACAAAAGAGAAAGACCCAGCCAGGCTCAAACAG...TGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CCA 90 bp AACTGCAAAGCCCTCTTCTGGAGTTTCTTGATGTGCTTTTTCAAACGCTCCTCTTCCACGTCAACGAGCTaGGAGGCACGGCTGGCCTCA +
Preference number: 2 (lower is better)
Translates to: NCKALFWSFLMCFFKRSSSTSTS*EARLAS
Trigger: TGAGGCCAGCCGTGCCTCCCAGCTCGTTGACGTGGA...AGAGGAGCGTTTGAAAAAGCACATCAAGAAACTCCAGAAGAGGGCTTTGCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR-3UTR CCA 90 bp ATCTGGGTACCAAAAGGTGTCATCTGGCCAGTGCGGATGAGCTCTTCCCAGGCACCTCCAAGGATGGCCTaGAGATGCTTTTGTTTTGCA +
Preference number: 2 (lower is better)
Translates to: IWVPKGVIWPVRMSSSQAPPRMA*RCFCFA
Trigger: TGCAAAACAAAAGCATCTCCAGGCCATCCTTGGAGG...TGCCTGGGAAGAGCTCATCCGCACTGGCCAGATGACACCTTTTGGTACCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR-3UTR TCA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTTCTAACTGTGCTCCCTaGCAGCATCTTTTGGGTAAA +
Preference number: 2 (lower is better)
Translates to: PARRHGNNVSDLHTETPPSNCAP*QHLLGK
Trigger: TTTACCCAAAAGATGCTGTCAGGGAGCACAGTTAGA...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTAAAGCCAGGGTAAACTaGATACCCTACAGCTTTCCA +
Preference number: 2 (lower is better)
Translates to: PARRHGNNVSDLHTETPPKARVN*IPYSFP
Trigger: TGGAAAGCTGTAGGGTATTCAGTTTACCCTGGCTTT...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTGGCATTTGGGTGTCTaGACATCTGATCCAGTTCCT +
Preference number: 2 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLWHLGV*TSDPVP
Trigger: AGGAACTGGATCAGATGTTCAGACACCCAAATGCCA...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR GCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGAAGCAGGGAACTTCTTaGGTTTTGGAACATCATGGT +
Preference number: 2 (lower is better)
Translates to: ECKGRRKTKATGEKTACQKQGTS*VLEHHG
Trigger: ACCATGATGTTCCAAAACGCAAGAAGTTCCCTGCTT...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR GCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGTTCTGGTCCAGATACTaGATTTGTCTCTTCTCCAAG +
Preference number: 2 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWFWSRY*ICLFSK
Trigger: CTTGGAGAAGAGACAAATGCAGTATCTGGACCAGAA...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR GCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGAAACATAATCGTCATTaGTCTGTTCCTTGGCCTCAC +
Preference number: 2 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWKHNRH*SVPWPH
Trigger: GTGAGGCCAAGGAACAGAGCAATGACGATTATGTTT...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CCA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACCAGACAAGAGAGGCCTaGAGTGGTGTCACTTCATGG +
Preference number: 2 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHQTREA*SGVTSW
Trigger: CCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTG...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTAAGGGTTTGGAGAAATaGGTCCTTTTATGGAGGGTG +
Preference number: 2 (lower is better)
Translates to: LASQPARKGNVKESAYPAKGLEK*VLLWRV
Trigger: CACCCTCCATAAAAGGACCCATTTCTCCAAACCCTT...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCGAACTTCTTGCGTTTTaGAACATCATGGTCTGCTCC +
Preference number: 2 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVELLAF*NIMVCS
Trigger: GGAGCAGACCATGATGTTCCAAAACGCAAGAAGTTC...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CCA 90 bp AACACCAGACACTGCTCCCAGACACCGCTGACGAGAGAGCCTCAGTGCTTTCAGCTTAGGCTTTTGCTTTaGTCTCAGATGTTTCTCCAG +
Preference number: 2 (lower is better)
Translates to: NTRHCSQTPLTREPQCFQLRLLL*SQMFLQ
Trigger: CTGGAGAAACATCTGAGACCAAAGCAAAAGCCTAAG...CTGAAAGCACTGAGGCTCTCTCGTCAGCGGTGTCTGGGAGCAGTGTCTGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR TCA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTGCAGTCTGTGTCATGTaGTTCTCTAAATGCATGGAG +
Preference number: 2 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLAVCVM*FSKCME
Trigger: CTCCATGCATTTAGAGAATCACATGACACAGACTGC...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp TGCCACTTGAAGCTGGAGGGGATAAGAAATGCTGGCATCTTGCCCCTCCCTGTGGGAAGAATGGGAAAATaGCATTATAGCAGCAGTCTG +
Preference number: 2 (lower is better)
Translates to: CHLKLEGIRNAGILPLPVGRMGK*HYSSSL
Trigger: CAGACTGCTGCTATAATGTCATTTTCCCATTCTTCC...CACAGGGAGGGGCAAGATGCCAGCATTTCTTATCCCCTCCAGCTTCAAGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000681659.1
3UTR-3UTR TCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGTTCCAGTACCCAAACTaGTCTTCTTCTAGTTCATCA +
Preference number: 2 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWFQYPN*SSSSSS
Trigger: TGATGAACTAGAAGAAGATCAGTTTGGGTACTGGAA...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR TCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGTTGTCAAAAACTGCTTaGAGATTTGTCGGTGGTAGA +
Preference number: 2 (lower is better)
Translates to: ECKGRRKTKATGEKTACQLSKTA*RFVGGR
Trigger: TCTACCACCGACAAATCTTCAAGCAGTTTTTGACAA...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR TCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGTGGCATCGTGCTTCATaGCACTGTGCACGCCAACTG +
Preference number: 2 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRWHRAS*HCARQL
Trigger: CAGTTGGCGTGCACAGTGTCATGAAGCACGATGCCA...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR TCA 90 bp AACTGCAAAGCCCTCTTCTGGAGTTTCTTGATGTGCTTTTTCAAACGCTCCTCTTCTCCTGGACAGGCATaGGCATGCTGCCAAGACTGG +
Preference number: 2 (lower is better)
Translates to: NCKALFWSFLMCFFKRSSSPGQA*ACCQDW
Trigger: CCAGTCTTGGCAGCATGCTCATGCCTGTCCAGGAGA...AGAGGAGCGTTTGAAAAAGCACATCAAGAAACTCCAGAAGAGGGCTTTGCAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR-3UTR GCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGGGGAGGCAGACTATTaGTTGAACATTTTTAATGGT +
Preference number: 2 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWGEADY*LNIFNG
Trigger: ACCATTAAAAATGTTCAAGCAATAGTCTGCCTCCCC...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR GCA 90 bp TTAGCAGTATTCTGGCTTGAGTTTCCAAATTCCTTCACCACCAGAAGTTCTATGCTGGCCTATTCTCCATaGTCGCTCCCGGGCCTGCGT +
Preference number: 2 (lower is better)
Translates to: LAVFWLEFPNSFTTRSSMLAYSP*SLPGLR
Trigger: ACGCAGGCCCGGGAGCGAGCATGGAGAATAGGCCAG...CATAGAACTTCTGGTGGTGAAGGAATTTGGAAACTCAAGCCAGAATACTGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CCA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTCCTGACAGCATCTTTTaGGTAAAGGAACAAATGTGC +
Preference number: 2 (lower is better)
Translates to: PARRHGNNVSDLHTETPPPDSIF*VKEQMC
Trigger: GCACATTTGTTCCTTTACCCAAAAGATGCTGTCAGG...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTGCTTTCATCACCAGATaGCATAGAAGTTTTGCCTGT +
Preference number: 2 (lower is better)
Translates to: LASQPARKGNVKESAYPAAFITR*HRSFAC
Trigger: ACAGGCAAAACTTCTATGCCATCTGGTGATGAAAGC...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CCA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGTGTGGCCAGTCCAGGTaGGAACACCAGACACTGCTC +
Preference number: 2 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRCGQSR*EHQTLL
Trigger: GAGCAGTGTCTGGTGTTCCCACCTGGACTGGCCACA...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CCA 90 bp AACTGCAAAGCCCTCTTCTGGAGTTTCTTGATGTGCTTTTTCAAACGCTCCTCTTCCCAGGCAGTCTCCTaGACAGGCATGAGCATGCTG +
Preference number: 2 (lower is better)
Translates to: NCKALFWSFLMCFFKRSSSQAVS*TGMSML
Trigger: CAGCATGCTCATGCCTGTCCAGGAGACTGCCTGGGA...AGAGGAGCGTTTGAAAAAGCACATCAAGAAACTCCAGAAGAGGGCTTTGCAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR-3UTR TCA 90 bp CCTGTGAGGTACCATACCTCTGGACAGGGAGCTGAGGGAGACGGAGCTCTGTTTGGTAAGAAAATAAACTaGGGATCAAAGCAACACCAT +
Preference number: 2 (lower is better)
Translates to: PVRYHTSGQGAEGDGALFGKKIN*GSKQHH
Trigger: ATGGTGTTGCTTTGATCCTCAGTTTATTTTCTTACC...AAACAGAGCTCCGTCTCCCTCAGCTCCCTGTCCAGAGGTATGGTACCTCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681659.1
3UTR-3UTR TCA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCAGTCAGATCTCCACACTaGGACACCACCTTCCCAAGA +
Preference number: 2 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSVRSPH*DTTFPR
Trigger: TCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGAC...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp GTAGTGAGATACAAACAGCCTTGGCTGGAATCCAAACCGCAGAAACAAGAAAGCGTCAGATCTCCACACTaGGACACCACCTTCCCAAGA +
Preference number: 2 (lower is better)
Translates to: VVRYKQPWLESKPQKQESVRSPH*DTTFPR
Trigger: TCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGAC...GCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGGAAGTAGTCTTAAGCTaGGCAGCCAGACGTCCAGGT +
Preference number: 2 (lower is better)
Translates to: IPKCFMSEQGQQITLRTREVVLS*AARRPG
Trigger: ACCTGGACGTCTGGCTGCTCAGCTTAAGACTACTTC...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp GAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTGCTCTATTGTGCCCAGAGCCAAGAATaGAAGGTGTGTGCAGAGCAG +
Preference number: 2 (lower is better)
Translates to: EVTYRGAQNSKQTLLLYCAQSQE*KVCAEQ
Trigger: CTGCTCTGCACACACCTTTCATTCTTGGCTCTGGGC...ACAATAGAGCAGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680107.1
3UTR-3UTR GCA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGGGAGAGAAGACAGCCTaGCAGCCTGCAGACAAGAGA +
Preference number: 2 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRGEKTA*QPADKR
Trigger: TCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCTCTCC...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR GCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGCTTTTGATAGTATTTaGTACTTGAAGAGGAGGCTA +
Preference number: 2 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWAFDSI*YLKRRL
Trigger: TAGCCTCCTCTTCAAGTAGCAAATACTATCAAAAGC...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR GCA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTCCACCTTGCTCCTACTaGATTATAGCTTTTGATAGT +
Preference number: 2 (lower is better)
Translates to: PARRHGNNVSDLHTETPPPPCSY*IIAFDS
Trigger: ACTATCAAAAGCTATAATGCAGTAGGAGCAAGGTGG...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR GCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGGGGCCTGCGTGTCCGTaGTTGGGTTCCAGTCTGGGT +
Preference number: 2 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLGPACP*LGSSLG
Trigger: ACCCAGACTGGAACCCAAGCACGGACACGCAGGCCC...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR GCA 90 bp GGGAAATACTCAGACTCTTCACCCTCAGAGTCTCCCTCTGCCTCTGGCCTCATGCAGTTTTGCTTGATCTaGCAAATACTTTTCGAAGCC +
Preference number: 2 (lower is better)
Translates to: GKYSDSSPSESPSASGLMQFCLI*QILFEA
Trigger: GGCTTCGAAAAGTATTTGGCAGATCAAGCAAAACTG...CATGAGGCCAGAGGCAGAGGGAGACTCTGAGGGTGAAGAGTCTGAGTATTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR-3UTR GCA 90 bp GGGAAATACTCAGACTCTTCACCCTCAGAGTCTCCCTCTGCCTCTGGCCTCATGTGGAGTTTCTTGATGTaGTTTTTCAAACGCTCCTCT +
Preference number: 2 (lower is better)
Translates to: GKYSDSSPSESPSASGLMWSFLM*FFKRSS
Trigger: AGAGGAGCGTTTGAAAAAGCACATCAAGAAACTCCA...CATGAGGCCAGAGGCAGAGGGAGACTCTGAGGGTGAAGAGTCTGAGTATTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR-3UTR CCA 90 bp TGGGCAGCAGGGCAGAAGCTTCCTGCAGGTGCCCGCTTTCACTTTCTAAACGCTCCTGACCTTTGTGGGTaGCAAATGGTAAATATAAAT +
Preference number: 2 (lower is better)
Translates to: WAAGQKLPAGARFHFLNAPDLCG*QMVNIN
Trigger: ATTTATATTTACCATTTGCCACCCACAAAGGTCAGG...AGCGTTTAGAAAGTGAAAGCGGGCACCTGCAGGAAGCTTCTGCCCTGCTGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CCA 90 bp AGAAGACAGCCTGCCAGCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCAGTGCATGCATGTGTGTaGTTTTTATGTACCTACTTT +
Preference number: 2 (lower is better)
Translates to: RRQPASLQTREAWSGVTSVHACV*FLCTYF
Trigger: AAAGTAGGTACATAAAAACCACACACATGCATGCAC...TGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CCA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGCCATCAGTGTGGGCCTaGAAAGCGATGAAGTTTCTC +
Preference number: 2 (lower is better)
Translates to: KGECQGECIPCFFKGPIGPSVWA*KAMKFL
Trigger: GAGAAACTTCATCGCTTTCCAGGCCCACACTGATGG...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CCA 90 bp ATAATCTTCATCTCCATCATCTCGGTATCTTCCCACTTTCCGACCTCCTCCTCCCTGCTCCTCCAAGGATaGCCTGGAGATGCTTTTGTT +
Preference number: 2 (lower is better)
Translates to: IIFISIISVSSHFPTSSSLLLQG*PGDAFV
Trigger: AACAAAAGCATCTCCAGGCCATCCTTGGAGGAGCAG...GGAGGAGGAGGTCGGAAAGTGGGAAGATACCGAGATGATGGAGATGAAGATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR-3UTR TCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCAATTTACCAGTACCTTaGAAAGAGGATCTTTCCAAG +
Preference number: 2 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVNLPVP*KEDLSK
Trigger: CTTGGAAAGATCCTCTTTTCAAGGTACTGGTAAATT...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTATAGTATTTGCTACTTaGAGAGGAGGCTATACCTTG +
Preference number: 2 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLIVFAT*RGGYTL
Trigger: CAAGGTATAGCCTCCTCTTCAAGTAGCAAATACTAT...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGATGCAAAGCACCAAATaGCAGCGTGAGGAGTGTGGT +
Preference number: 2 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRMQSTK*QREECG
Trigger: ACCACACTCCTCACGCTGTCATTTGGTGCTTTGCAT...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTTCTTCTGCCACACTATaGTGTTTTGTTTTTGACTTG +
Preference number: 2 (lower is better)
Translates to: PARRHGNNVSDLHTETPPSSATL*CFVFDL
Trigger: CAAGTCAAAAACAAAACATCATAGTGTGGCAGAAGA...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR TCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGCTTGGCTGCACCCACTaGAATGGGAGGGAGGGAGTG +
Preference number: 2 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLLGCTH*NGREGV
Trigger: CACTCCCTCCCTCCCATTTCAGTGGGTGCAGCCAAG...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681659.1
3UTR-3UTR GCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTAGTATGATACCCAAATaGTTCATGAGTGAACAAGGT +
Preference number: 2 (lower is better)
Translates to: LASQPARKGNVKESAYPASMIPK*FMSEQG
Trigger: ACCTTGTTCACTCATGAAGCATTTGGGTATCATACT...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR GCA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGTTCAGTGCTCTGGGATaGATCAGGACTAGTCAGAGT +
Preference number: 2 (lower is better)
Translates to: KGECQGECIPCFFKGPIGFSALG*IRTSQS
Trigger: ACTCTGACTAGTCCTGATGCATCCCAGAGCACTGAA...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR GCA 90 bp TTGGGAAAAAGTCATCATCAATCTCCTGCACTGGCACTTTCTTCTGCCGTTTCCCTCCCAAGGTCTCCTTaGCTTTGGCAATCCCACTTT +
Preference number: 2 (lower is better)
Translates to: LGKSHHQSPALALSSAVSLPRSP*LWQSHF
Trigger: AAAGTGGGATTGCCAAAGGCAAGGAGACCTTGGGAG...GGAAACGGCAGAAGAAAGTGCCAGTGCAGGAGATTGATGATGACTTTTTCCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR-3UTR CCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGGGAACAGGTGCAAGATaGTGTGGGGGTGGGGAGGCA +
Preference number: 2 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLGTGAR*CGGGEA
Trigger: TGCCTCCCCACCCCCACACCATCTTGCACCTGTTCC...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTGATTCTCTAAATGCATaGAGAATACACACCAAACCT +
Preference number: 2 (lower is better)
Translates to: LASQPARKGNVKESAYPADSLNA*RIHTKP
Trigger: AGGTTTGGTGTGTATTCTCCATGCATTTAGAGAATC...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CCA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTGATTCTCTAAATGCATaGAGAATACACACCAAACCT +
Preference number: 2 (lower is better)
Translates to: PARRHGNNVSDLHTETPPDSLNA*RIHTKP
Trigger: AGGTTTGGTGTGTATTCTCCATGCATTTAGAGAATC...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CCA 90 bp AGAAGACAGCCTGCCAGCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCAGAAGAAACACAAATATaGATGTGTCCTCATTGTATC +
Preference number: 2 (lower is better)
Translates to: RRQPASLQTREAWSGVTSEETQI*MCPHCI
Trigger: GATACAATGAGGACACATCCATATTTGTGTTTCTTC...TGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGTCTCTTCAGATGATGTaGCATCATTTACAGATATGT +
Preference number: 2 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWSLQMM*HHLQIC
Trigger: ACATATCTGTAAATGATGCCACATCATCTGAAGAGA...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CCA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTTTCTTCACCAGGTGTaGAATTCGAGTTCCTTCAAA +
Preference number: 2 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLFLHQV*NSSSFK
Trigger: TTTGAAGGAACTCGAATTCCACACCTGGTGAAGAAA...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CCA 90 bp TTGGGAAAAAGTCATCATCAATCTCCTGCACTGGCACTTTCTTCTGCCGTTTCCGTTTTTATTTTGCACTaGGGCTGGAGGCGTGACTGG +
Preference number: 2 (lower is better)
Translates to: LGKSHHQSPALALSSAVSVFILH*GWRRDW
Trigger: CCAGTCACGCCTCCAGCCCCAGTGCAAAATAAAAAC...GGAAACGGCAGAAGAAAGTGCCAGTGCAGGAGATTGATGATGACTTTTTCCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR CAA 90 bp TCACAGAACCACAAACACATAAACAGTAGTGAGATACAAACAGCCTaGGCTGGAATCCAAACCGCAGAAACAAGAAAGCCCGTCGCAAGG +
Preference number: 2 (lower is better)
Translates to: SQNHKHINSSEIQTA*AGIQTAETRKPVAR
Trigger: CCTTGCGACGGGCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTACTGTTTATGTGTTTGTGGTTCTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR CAA 90 bp TCCTTCAAACTTGGCGTCTCTGCAATGCTTAGAGTTCTTAGGCTTTaGCTTTGGTCTCAGATGTTTCTCCAGGGTCTCTTCTTCTGCCAC +
Preference number: 2 (lower is better)
Translates to: SFKLGVSAMLRVLRL*LWSQMFLQGLFFCH
Trigger: GTGGCAGAAGAAGAGACCCTGGAGAAACATCTGAGACCAAAGCAAAAGCCTAAGAACTCTAAGCATTGCAGAGACGCCAAGTTTGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR TCA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGCAAATGCTTCATGAGTaGACAAGGTCAGCAGATCAC +
Preference number: 2 (lower is better)
Translates to: KGECQGECIPCFFKGPIGQMLHE*TRSADH
Trigger: GTGATCTGCTGACCTTGTTCACTCATGAAGCATTTG...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGATCACTTCCATCTCTTaGGATGCCAGGTCACTACTG +
Preference number: 2 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRITSIS*DARSLL
Trigger: CAGTAGTGACCTGGCATCTCAAGAGATGGAAGTGAT...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTAGATTTCTCTTCAGATaGTGTGGCATCATTTACAGA +
Preference number: 2 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLRFLFR*CGIIYR
Trigger: TCTGTAAATGATGCCACATCATCTGAAGAGAAATCT...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR TCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGTCTTGCCCCTCCCTGTaGGGTACCATACCTCTGGAC +
Preference number: 2 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLSCPSL*GTIPLD
Trigger: GTCCAGAGGTATGGTACCTCACAGGGAGGGGCAAGA...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681659.1
3UTR-3UTR GCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATGGGAACACCAGACACTaGTCCCAGACACCGCTGACG +
Preference number: 2 (lower is better)
Translates to: IYIINPTILCRQSYTYRNGNTRH*SQTPLT
Trigger: CGTCAGCGGTGTCTGGGAGCAGTGTCTGGTGTTCCC...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR GCA 90 bp TTAGCAGTATTCTGGCTTGAGTTTCCAAATTCCTTCACCACCAGAAGTTCTATGAGGGCAGAAGCTTCCTaGAGGTGCCCGCTTTCACTT +
Preference number: 2 (lower is better)
Translates to: LAVFWLEFPNSFTTRSSMRAEAS*RCPLSL
Trigger: AAGTGAAAGCGGGCACCTGCAGGAAGCTTCTGCCCT...CATAGAACTTCTGGTGGTGAAGGAATTTGGAAACTCAAGCCAGAATACTGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR GCA 90 bp GTAGTGAGATACAAACAGCCTTGGCTGGAATCCAAACCGCAGAAACAAGAAAGCTTGGATTCAAACTCCTaGAGTATCTCCCTGGTGCTG +
Preference number: 2 (lower is better)
Translates to: VVRYKQPWLESKPQKQESLDSNS*SISLVL
Trigger: CAGCACCAGGGAGATACTGCAGGAGTTTGAATCCAA...GCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CCA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACCCTGACAGCATCTTTTaGGTAAAGGAACAAATGTGC +
Preference number: 2 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHPDSIF*VKEQMC
Trigger: GCACATTTGTTCCTTTACCCAAAAGATGCTGTCAGG...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTGTAGAGATCTACAAATaGCCAATAAACATGGAAATG +
Preference number: 2 (lower is better)
Translates to: LASQPARKGNVKESAYPAVEIYK*PINMEM
Trigger: CATTTCCATGTTTATTGGCCATTTGTAGATCTCTAC...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGCCAGAAATCCCCCTGTaGCCAGTCCAGGTGGGAACA +
Preference number: 2 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLPEIPL*PVQVGT
Trigger: TGTTCCCACCTGGACTGGCCACAGGGGGATTTCTGG...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATGTATCTCCCTGGTGCTaGCCTGGCCATCAGTGTGGG +
Preference number: 2 (lower is better)
Translates to: IYIINPTILCRQSYTYRNVSPWC*PGHQCG
Trigger: CCCACACTGATGGCCAGGCCAGCACCAGGGAGATAC...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CCA 90 bp ATAATCTTCATCTCCATCATCTCGGTATCTTCCCACTTTCCGACCTCCTCCTCCATCAATCTCCTGCACTaGCACTTTCTTCTGCCGTTT +
Preference number: 2 (lower is better)
Translates to: IIFISIISVSSHFPTSSSINLLH*HFLLPF
Trigger: AAACGGCAGAAGAAAGTGCCAGTGCAGGAGATTGAT...GGAGGAGGAGGTCGGAAAGTGGGAAGATACCGAGATGATGGAGATGAAGATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR-3UTR TCA 90 bp GTAGTGAGATACAAACAGCCTTGGCTGGAATCCAAACCGCAGAAACAAGAAAGCTCTAACTGTGCTCCCTaGCAGCATCTTTTGGGTAAA +
Preference number: 2 (lower is better)
Translates to: VVRYKQPWLESKPQKQESSNCAP*QHLLGK
Trigger: TTTACCCAAAAGATGCTGTCAGGGAGCACAGTTAGA...GCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp GTAGTGAGATACAAACAGCCTTGGCTGGAATCCAAACCGCAGAAACAAGAAAGCCAAATGCTTCATGAGTaGACAAGGTCAGCAGATCAC +
Preference number: 2 (lower is better)
Translates to: VVRYKQPWLESKPQKQESQMLHE*TRSADH
Trigger: GTGATCTGCTGACCTTGTTCACTCATGAAGCATTTG...GCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACATAGTATTTGCTACTTaGAGAGGAGGCTATACCTTG +
Preference number: 2 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHIVFAT*RGGYTL
Trigger: CAAGGTATAGCCTCCTCTTCAAGTAGCAAATACTAT...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR GCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGGAAAAAGATGCCCTCTaGTTAAAGGAAAGCCAGGGT +
Preference number: 2 (lower is better)
Translates to: IPKCFMSEQGQQITLRTREKDAL*LKESQG
Trigger: ACCCTGGCTTTCCTTTAAGCAGAGGGCATCTTTTTC...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR GCA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACGAGAGGAAAAGAGCATaGCAGAGAATACAAATCCAA +
Preference number: 2 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHERKRA*QRIQIQ
Trigger: TTGGATTTGTATTCTCTGGCATGCTCTTTTCCTCTC...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR GCA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACGGGGAGGCAGACTATTaGTTGAACATTTTTAATGGT +
Preference number: 2 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHGEADY*LNIFNG
Trigger: ACCATTAAAAATGTTCAAGCAATAGTCTGCCTCCCC...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR GCA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCAGGAGAGTGCATACCCTaGTTCTTTAAAGGGCCAATT +
Preference number: 2 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSGECIP*FFKGPI
Trigger: AATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCC...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR GCA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTCGATTAGAAGTTACTaGATTTACTTCAGCTCCTTT +
Preference number: 2 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLSIRSY*IYFSSF
Trigger: AAAGGAGCTGAAGTAAATGCAGTAACTTCTAATCGA...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR GCA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGCAGGGTCTCTTCTTCTaGCACACTATGATGTTTTGT +
Preference number: 2 (lower is better)
Translates to: KGECQGECIPCFFKGPIGQGLFF*HTMMFC
Trigger: ACAAAACATCATAGTGTGGCAGAAGAAGAGACCCTG...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CCA 90 bp ATCATTGCTAGTTACATTACTACTCATGTGAGGGTCATCTTTCAAAGGATCACTCATGGTAACAACGGCTaGGTCTGCTGTGGGCTGCAG +
Preference number: 2 (lower is better)
Translates to: IIASYITTHVRVIFQRITHGNNG*VCCGLQ
Trigger: CTGCAGCCCACAGCAGACCCAGCCGTTGTTACCATG...AGTGATCCTTTGAAAGATGACCCTCACATGAGTAGTAATGTAACTAGCAATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR TCA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACAATTTACCAGTACCTTaGAAAGAGGATCTTTCCAAG +
Preference number: 2 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHNLPVP*KEDLSK
Trigger: CTTGGAAAGATCCTCTTTTCAAGGTACTGGTAAATT...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGCAGAACCCTCCTCTCTaGGTCACATGGATGAGCAGA +
Preference number: 2 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLQNPPL*VTWMSR
Trigger: TCTGCTCATCCATGTGACTCAGAGAGGAGGGTTCTG...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGGCAGTCTGTGTCATGTaGTTCTCTAAATGCATGGAG +
Preference number: 2 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRAVCVM*FSKCME
Trigger: CTCCATGCATTTAGAGAATCACATGACACAGACTGC...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp GTAGTGAGATACAAACAGCCTTGGCTGGAATCCAAACCGCAGAAACAAGAAAGCGGAAGAATGGGAAAATaGCATTATAGCAGCAGTCTG +
Preference number: 2 (lower is better)
Translates to: VVRYKQPWLESKPQKQESGRMGK*HYSSSL
Trigger: CAGACTGCTGCTATAATGTCATTTTCCCATTCTTCC...GCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGAAAGGAACTTGCCCATaGATGGCAAAACACAATGCA +
Preference number: 2 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRKGTCP*MAKHNA
Trigger: TGCATTGTGTTTTGCCATTCATGGGCAAGTTCCTTT...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGAGTCTGGGTCATAGATaGCAACTCTGTTTGCCCCCG +
Preference number: 2 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLSLGHR*QLCLPP
Trigger: CGGGGGCAAACAGAGTTGTCATCTATGACCCAGACT...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR GCA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGTGGAACATCATGGTCTaGTCCAAAGGCTGGTTGAAT +
Preference number: 2 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRWNIMV*SKGWLN
Trigger: ATTCAACCAGCCTTTGGAGCAGACCATGATGTTCCA...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGCAGACAAGAGAGGCCTaGAGTGGTGTCACTTCATGG +
Preference number: 2 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMQTREA*SGVTSW
Trigger: CCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTG...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CCA 90 bp GTAGTGAGATACAAACAGCCTTGGCTGGAATCCAAACCGCAGAAACAAGAAAGCGATACCACTTACTGTTaGCAAGGGTTTGGAGAAATG +
Preference number: 2 (lower is better)
Translates to: VVRYKQPWLESKPQKQESDTTYC*QGFGEM
Trigger: CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATC...GCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGAGCCGCCCACCCGCGTaGTCAGAAGAAACACAAATA +
Preference number: 2 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLSRPPA*SEETQI
Trigger: TATTTGTGTTTCTTCTGACCACGCGGGTGGGCGGCT...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CCA 90 bp ATCATTGCTAGTTACATTACTACTCATGTGAGGGTCATCTTTCAAAGGATCACTCTGCGTGTCCGTGCTTaGGTTCCAGTCTGGGTCATA +
Preference number: 2 (lower is better)
Translates to: IIASYITTHVRVIFQRITLRVRA*VPVWVI
Trigger: TATGACCCAGACTGGAACCCAAGCACGGACACGCAG...AGTGATCCTTTGAAAGATGACCCTCACATGAGTAGTAATGTAACTAGCAATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR TCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGTCCTTTTATGGAGGGTaGATTGATGCAAGCAATTCT +
Preference number: 2 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRSFYGG*IDASNS
Trigger: AGAATTGCTTGCATCAATTCACCCTCCATAAAAGGA...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGATGCAAAGCACCAAATaGCAGCGTGAGGAGTGTGGT +
Preference number: 2 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLMQSTK*QREECG
Trigger: ACCACACTCCTCACGCTGTCATTTGGTGCTTTGCAT...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp GAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTGCTCTATTGTAAAGTTGTGTTCTTATaGCATTCAGCGCATCGCGTT +
Preference number: 2 (lower is better)
Translates to: EVTYRGAQNSKQTLLLYCKVVFL*HSAHRV
Trigger: AACGCGATGCGCTGAATGTCATAAGAACACAACTTT...ACAATAGAGCAGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680107.1
3UTR-3UTR TCA 90 bp GAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTGCTCTATTGTACCTGCTATTCAGTGTaGTATTCAACGGAACACTTC +
Preference number: 2 (lower is better)
Translates to: EVTYRGAQNSKQTLLLYCTCYSV*YSTEHF
Trigger: GAAGTGTTCCGTTGAATATCACACTGAATAGCAGGT...ACAATAGAGCAGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680107.1
3UTR-3UTR GCA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGATCCAAGAAACAAACTaGACTAAGACAGCTAAGAAG +
Preference number: 2 (lower is better)
Translates to: KGECQGECIPCFFKGPIGIQETN*TKTAKK
Trigger: CTTCTTAGCTGTCTTAGTGCAGTTTGTTTCTTGGAT...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR GCA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCACCACCTTGCTCCTACTaGATTATAGCTTTTGATAGT +
Preference number: 2 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSPPCSY*IIAFDS
Trigger: ACTATCAAAAGCTATAATGCAGTAGGAGCAAGGTGG...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR GCA 90 bp GTAGTGAGATACAAACAGCCTTGGCTGGAATCCAAACCGCAGAAACAAGAAAGCACCATTCTACTTAACTaGATTGTTCTCCAAGTCCCT +
Preference number: 2 (lower is better)
Translates to: VVRYKQPWLESKPQKQESTILLN*IVLQVP
Trigger: AGGGACTTGGAGAACAATGCAGTTAAGTAGAATGGT...GCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR GCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGAATCCAACAATTCTGTaGAGGCAGAGCTATACTTAC +
Preference number: 2 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRNPTIL*RQSYTY
Trigger: GTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR GCA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCAGATGTTGATGAAGGATaGTGCACAGAGAAGTTAGAA +
Preference number: 2 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSDVDEG*CTEKLE
Trigger: TTCTAACTTCTCTGTGCAGCATCCTTCATCAACATC...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR GCA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGGCTCTTCCACTAAAATaGTCAGGGACATTATCTTTT +
Preference number: 2 (lower is better)
Translates to: KGECQGECIPCFFKGPIGALPLK*SGTLSF
Trigger: AAAAGATAATGTCCCTGAGCATTTTAGTGGAAGAGC...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGTCTGGCAGAATCAGGTaGTTTCTAGCTCTCATTTTA +
Preference number: 2 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRSGRIR*FLALIL
Trigger: TAAAATGAGAGCTAGAAACCACCTGATTCTGCCAGA...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CCA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCAGTGATGCAGATAACTTaGATTCAAACTCCTGCAGTA +
Preference number: 2 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSVMQIT*IQTPAV
Trigger: TACTGCAGGAGTTTGAATCCAAGTTATCTGCATCAC...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR TCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGAGCATCTGCCTTGACTaGGAAAACAGCAATACTCGC +
Preference number: 2 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMSICLD*ENSNTR
Trigger: GCGAGTATTGCTGTTTTCTCAGTCAAGGCAGATGCT...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR TCA 90 bp GCATTCTGTAGTATGATAGGTTTTCTATTTCAGACAGCTAAGAATGCCTTACAGTATCTCAGGAGGTGGTaGCACCTGCTATTCAGTGTG +
Preference number: 2 (lower is better)
Translates to: AFCSMIGFLFQTAKNALQYLRRW*HLLFSV
Trigger: CACACTGAATAGCAGGTGTCACCACCTCCTGAGATA...CTGTAAGGCATTCTTAGCTGTCTGAAATAGAAAACCTATCATACTACAGAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680107.1
3UTR-3UTR GCA 90 bp GTAGTGAGATACAAACAGCCTTGGCTGGAATCCAAACCGCAGAAACAAGAAAGCATCCAAGAAACAAACTaGACTAAGACAGCTAAGAAG +
Preference number: 2 (lower is better)
Translates to: VVRYKQPWLESKPQKQESIQETN*TKTAKK
Trigger: CTTCTTAGCTGTCTTAGTGCAGTTTGTTTCTTGGAT...GCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR GCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGGCTTTTGATAGTATTTaGTACTTGAAGAGGAGGCTA +
Preference number: 2 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRAFDSI*YLKRRL
Trigger: TAGCCTCCTCTTCAAGTAGCAAATACTATCAAAAGC...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR GCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATTCTTTTCTTCAATGGTaGCCGCAGTCAGGAGCCTGT +
Preference number: 2 (lower is better)
Translates to: IYIINPTILCRQSYTYRNSFLQW*PQSGAC
Trigger: ACAGGCTCCTGACTGCGGGCACCATTGAAGAAAAGA...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR GCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATTCCATGATGGCATCGTaGTTCATGACACTGTGCACG +
Preference number: 2 (lower is better)
Translates to: IYIINPTILCRQSYTYRNSMMAS*FMTLCT
Trigger: CGTGCACAGTGTCATGAAGCACGATGCCATCATGGA...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR GCA 90 bp AAACTTCAAGGAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTAGAATGAAAGGTGTGTaGAGAGCAGGAAGCAGAATT +
Preference number: 2 (lower is better)
Translates to: KLQGGHLPWCSKFKTDLTRMKGV*RAGSRI
Trigger: AATTCTGCTTCCTGCTCTGCACACACCTTTCATTCT...AGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTCCTTGAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680107.1
3UTR-3UTR CCA 90 bp GTAGTGAGATACAAACAGCCTTGGCTGGAATCCAAACCGCAGAAACAAGAAAGCCCTGACCTTTGTGGGTaGCAAATGGTAAATATAAAT +
Preference number: 2 (lower is better)
Translates to: VVRYKQPWLESKPQKQESPDLCG*QMVNIN
Trigger: ATTTATATTTACCATTTGCCACCCACAAAGGTCAGG...GCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CCA 90 bp GTAGTGAGATACAAACAGCCTTGGCTGGAATCCAAACCGCAGAAACAAGAAAGCGTGCATGCATGTGTGTaGTTTTTATGTACCTACTTT +
Preference number: 2 (lower is better)
Translates to: VVRYKQPWLESKPQKQESVHACV*FLCTYF
Trigger: AAAGTAGGTACATAAAAACCACACACATGCATGCAC...GCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGAAGAGAGGCCTGGAGTaGTGTCACTTCATGGTAACA +
Preference number: 2 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLKRGLE*CHFMVT
Trigger: TGTTACCATGAAGTGACACCACTCCAGGCCTCTCTT...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CCA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGCAAGACGAAGGCAACTaGAGAGAAGACAGCCTGCCA +
Preference number: 2 (lower is better)
Translates to: ETFPYIICKLVKVALYIRQDEGN*REDSLP
Trigger: TGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTG...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
3UTR-3UTR CCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGTGTTTAGCAGTATTCTaGCTTGAGTTTCCAAATTCC +
Preference number: 2 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRCLAVF*LEFPNS
Trigger: GGAATTTGGAAACTCAAGCCAGAATACTGCTAAACA...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CCA 90 bp TTGGGAAAAAGTCATCATCAATCTCCTGCACTGGCACTTTCTTCTGCCGTTTCCTTTTGGACAGAACTCTaGCTTTCTTGTTTGGTTTGT +
Preference number: 2 (lower is better)
Translates to: LGKSHHQSPALALSSAVSFWTEL*LSCLVC
Trigger: ACAAACCAAACAAGAAAGCCAGAGTTCTGTCCAAAA...GGAAACGGCAGAAGAAAGTGCCAGTGCAGGAGATTGATGATGACTTTTTCCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR-3UTR TCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGTCTAACTGTGCTCCCTaGCAGCATCTTTTGGGTAAA +
Preference number: 2 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMSNCAP*QHLLGK
Trigger: TTTACCCAAAAGATGCTGTCAGGGAGCACAGTTAGA...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGCAGTCTGTGTCATGTaGTTCTCTAAATGCATGGAG +
Preference number: 2 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMAVCVM*FSKCME
Trigger: CTCCATGCATTTAGAGAATCACATGACACAGACTGC...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp ATCATTGCTAGTTACATTACTACTCATGTGAGGGTCATCTTTCAAAGGATCACTGTCCAGCATCTGCCTTaGCTGAGAAAACAGCAATAC +
Preference number: 2 (lower is better)
Translates to: IIASYITTHVRVIFQRITVQHLP*LRKQQY
Trigger: GTATTGCTGTTTTCTCAGTCAAGGCAGATGCTGGAC...AGTGATCCTTTGAAAGATGACCCTCACATGAGTAGTAATGTAACTAGCAATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR TCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGAATCAGTGGCTGTCTTaGAGCTATTGTAGTGGTACC +
Preference number: 2 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLNQWLS*SYCSGT
Trigger: GGTACCACTACAATAGCTTCAAGACAGCCACTGATT...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR GCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGGAAAAAGATGCCCTCTaGTTAAAGGAAAGCCAGGGT +
Preference number: 2 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLEKDAL*LKESQG
Trigger: ACCCTGGCTTTCCTTTAAGCAGAGGGCATCTTTTTC...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR GCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGCTGTACACAGTCACTTaGTTCTTCTGGCCTATTCTC +
Preference number: 2 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMLYTVT*FFWPIL
Trigger: GAGAATAGGCCAGAAGAAGCAAGTGACTGTGTACAG...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR GCA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGCTATTTGTCAAAAACTaGTTGAAGATTTGTCGGTGG +
Preference number: 2 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRLFVKN*LKICRW
Trigger: CCACCGACAAATCTTCAAGCAGTTTTTGACAAATAG...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR GCA 90 bp ATCATTGCTAGTTACATTACTACTCATGTGAGGGTCATCTTTCAAAGGATCACTTTGCACTTGTTTCAGTaGTCTGGGATGCATCAGGAC +
Preference number: 2 (lower is better)
Translates to: IIASYITTHVRVIFQRITLHLFQ*SGMHQD
Trigger: GTCCTGATGCATCCCAGAGCACTGAAACAAGTGCAA...AGTGATCCTTTGAAAGATGACCCTCACATGAGTAGTAATGTAACTAGCAATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR GCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATGAAGCTTCCTGCAGGTaGCCGCTTTCACTTTCTAAA +
Preference number: 2 (lower is better)
Translates to: IYIINPTILCRQSYTYRNEASCR*PLSLSK
Trigger: TTTAGAAAGTGAAAGCGGGCACCTGCAGGAAGCTTC...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAAGAGAGGCCTGGAGTaGTGTCACTTCATGGTAACA +
Preference number: 2 (lower is better)
Translates to: IYIINPTILCRQSYTYRNKRGLE*CHFMVT
Trigger: TGTTACCATGAAGTGACACCACTCCAGGCCTCTCTT...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CCA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCAGTAGAGATCTACAAATaGCCAATAAACATGGAAATG +
Preference number: 2 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSVEIYK*PINMEM
Trigger: CATTTCCATGTTTATTGGCCATTTGTAGATCTCTAC...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp GCCTCAGATTTCTCTTCAGATGATGTGGCATCATTTACAGATATGTTAGAAGCATGGTACCATCCATCTTaGGATAGGTATACTTTTGGG +
Preference number: 2 (lower is better)
Translates to: ASDFSSDDVASFTDMLEAWYHPS*DRYTFG
Trigger: CCCAAAAGTATACCTATCTCAAGATGGATGGTACCA...TGCTTCTAACATATCTGTAAATGATGCCACATCATCTGAAGAGAAATCTGAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR TCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATGCTCCAAAGGCTGGTTaGATCCTTCTTTTTAGATGG +
Preference number: 2 (lower is better)
Translates to: IYIINPTILCRQSYTYRNAPKAG*ILLFRW
Trigger: CCATCTAAAAAGAAGGATTCAACCAGCCTTTGGAGC...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGCCTGACAGCATCTTTTaGGTAAAGGAACAAATGTGC +
Preference number: 2 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMPDSIF*VKEQMC
Trigger: GCACATTTGTTCCTTTACCCAAAAGATGCTGTCAGG...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp TTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGGAAAAAAGCCAGGGTAAACTaGATACCCTACAGCTTTCCA +
Preference number: 2 (lower is better)
Translates to: FPYIICKLVKVALYIRRKKARVN*IPYSFP
Trigger: TGGAAAGCTGTAGGGTATTCAGTTTACCCTGGCTTT...TTTCCTCCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
3UTR-3UTR TCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGTCCTTTTATGGAGGGTaGATTGATGCAAGCAATTCT +
Preference number: 2 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMSFYGG*IDASNS
Trigger: AGAATTGCTTGCATCAATTCACCCTCCATAAAAGGA...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR GCA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGGAAAAAGATGCCCTCTaGTTAAAGGAAAGCCAGGGT +
Preference number: 2 (lower is better)
Translates to: ETFPYIICKLVKVALYIREKDAL*LKESQG
Trigger: ACCCTGGCTTTCCTTTAAGCAGAGGGCATCTTTTTC...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
3UTR-3UTR GCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGAGAGGAAAAGAGCATaGCAGAGAATACAAATCCAA +
Preference number: 2 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMERKRA*QRIQIQ
Trigger: TTGGATTTGTATTCTCTGGCATGCTCTTTTCCTCTC...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR GCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGGGGGAGGCAGACTATTaGTTGAACATTTTTAATGGT +
Preference number: 2 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLGEADY*LNIFNG
Trigger: ACCATTAAAAATGTTCAAGCAATAGTCTGCCTCCCC...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR CAA 90 bp ACCTGGATCCACAGGACAGAAATAGACAACTTAGCATGTGATGAGTaGAAAGCTGACATTTTAAACTGGTGGAGAAAAGAATATTTGTTG +
Preference number: 2 (lower is better)
Translates to: TWIHRTEIDNLACDE*KADILNWWRKEYLL
Trigger: CAACAAATATTCTTTTCTCCACCAGTTTAAAATGTCAGCTTTCAACTCATCACATGCTAAGTTGTCTATTTCTGTCCTGTGGATCCAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp TTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGGAAAAAAGGAACTTGCCCATaGATGGCAAAACACAATGCA +
Preference number: 2 (lower is better)
Translates to: FPYIICKLVKVALYIRRKKGTCP*MAKHNA
Trigger: TGCATTGTGTTTTGCCATTCATGGGCAAGTTCCTTT...TTTCCTCCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
3UTR-3UTR TCA 90 bp GCATTCTGTAGTATGATAGGTTTTCTATTTCAGACAGCTAAGAATGCCTTACAGCTTAATTGGCAAATCTaGGCAGATGAAATACCCTCA +
Preference number: 2 (lower is better)
Translates to: AFCSMIGFLFQTAKNALQLNWQI*ADEIPS
Trigger: TGAGGGTATTTCATCTGCTCAGATTTGCCAATTAAG...CTGTAAGGCATTCTTAGCTGTCTGAAATAGAAAACCTATCATACTACAGAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680107.1
3UTR-3UTR CCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGTGCATGCATGTGTGTaGTTTTTATGTACCTACTTT +
Preference number: 2 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMVHACV*FLCTYF
Trigger: AAAGTAGGTACATAAAAACCACACACATGCATGCAC...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR TCA 90 bp GCATTCTGTAGTATGATAGGTTTTCTATTTCAGACAGCTAAGAATGCCTTACAGTGTTCCATTGTTATGTaGCGTTCCAAAATTGGAACA +
Preference number: 2 (lower is better)
Translates to: AFCSMIGFLFQTAKNALQCSIVM*RSKIGT
Trigger: TGTTCCAATTTTGGAACGTCACATAACAATGGAACA...CTGTAAGGCATTCTTAGCTGTCTGAAATAGAAAACCTATCATACTACAGAATGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680107.1
3UTR-3UTR CCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATGATTCTCTAAATGCATaGAGAATACACACCAAACCT +
Preference number: 2 (lower is better)
Translates to: IYIINPTILCRQSYTYRNDSLNA*RIHTKP
Trigger: AGGTTTGGTGTGTATTCTCCATGCATTTAGAGAATC...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATTTTTTAGATGGCATTTaGGTGTCTGAACATCTGATC +
Preference number: 2 (lower is better)
Translates to: IYIINPTILCRQSYTYRNFLDGI*VSEHLI
Trigger: GATCAGATGTTCAGACACCCAAATGCCATCTAAAAA...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR CAA 90 bp CAGACCTTACTGCTCTATTGTAATATTTTTATGTTGCAAGGATCATaGTACACAGAGCAGTTTAAATCTACACCGTCTGTAAGGAAAAAG +
Preference number: 2 (lower is better)
Translates to: QTLLLYCNIFMLQGS*YTEQFKSTPSVRKK
Trigger: CTTTTTCCTTACAGACGGTGTAGATTTAAACTGCTCTGTGTACAATGATCCTTGCAACATAAAAATATTACAATAGAGCAGTAAGGTCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000680107.1
3UTR-3UTR GCA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGGCTTTTGATAGTATTTaGTACTTGAAGAGGAGGCTA +
Preference number: 2 (lower is better)
Translates to: ETFPYIICKLVKVALYIRAFDSI*YLKRRL
Trigger: TAGCCTCCTCTTCAAGTAGCAAATACTATCAAAAGC...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
3UTR GCA 72 bp CACTGCTCCCAGACACCGCTGACGAGAGAGCCTCAGTaGTTTCAGGGCATCCTGGGCCACTCGGTTGGCTTC +
Preference number: 3 (lower is better)
Translates to: HCSQTPLTREPQ*FQGILGHSVGF
Trigger: GAAGCCAACCGAGTGGCCCAGGATGCCCTGAAAGCACTGAGGCTCTCTCGTCAGCGGTGTCTGGGAGCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR CCA 72 bp CTGGTGCACCAGAAATCCCCCTGTGGCCAGTCCAGGTaGGAACACCAGACACTGCTCCCAGACACCGCTGAC +
Preference number: 3 (lower is better)
Translates to: LVHQKSPCGQSR*EHQTLLPDTAD
Trigger: GTCAGCGGTGTCTGGGAGCAGTGTCTGGTGTTCCCACCTGGACTGGCCACAGGGGGATTTCTGGTGCACCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR TCA 72 bp CAGGTGGGAACACCAGACACTGCTCCCAGACACCGCTaGCGAGAGAGCCTCAGTGCTTTCAGGGCATCCTGG +
Preference number: 3 (lower is better)
Translates to: QVGTPDTAPRHR*RESLSAFRASW
Trigger: CCAGGATGCCCTGAAAGCACTGAGGCTCTCTCGTCAGCGGTGTCTGGGAGCAGTGTCTGGTGTTCCCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR CCA 72 bp CGTCAACGAGCTGGGAGGCACGGCTGGCCTCATGGATaGCATTGTCCACCTGCTGAAGCACTCCCTGTTCCA +
Preference number: 3 (lower is better)
Translates to: RQRAGRHGWPHG*HCPPAEALPVP
Trigger: TGGAACAGGGAGTGCTTCAGCAGGTGGACAATGCCATCCATGAGGCCAGCCGTGCCTCCCAGCTCGTTGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR CCA 72 bp AGGACCGACCGATACTCCTTCTCCACGTCAACGAGCTaGGAGGCACGGCTGGCCTCATGGATGGCATTGTCC +
Preference number: 3 (lower is better)
Translates to: RTDRYSFSTSTS*EARLASWMALS
Trigger: GGACAATGCCATCCATGAGGCCAGCCGTGCCTCCCAGCTCGTTGACGTGGAGAAGGAGTATCGGTCGGTCCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR GCA 72 bp AGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTaGCAGCCTGCAGACAAGAGAGGCCTGGAGTGGTGT +
Preference number: 3 (lower is better)
Translates to: RRKTKATGEKTA*QPADKRGLEWC
Trigger: ACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR CCA 72 bp GCAGTCAGGAGCCTGTACACAGTCACTTGCTTCTTCTaGCCTATTCTCCATGCTCGCTCCCGGGCCTGCGTG +
Preference number: 3 (lower is better)
Translates to: AVRSLYTVTCFF*PILHARSRACV
Trigger: CACGCAGGCCCGGGAGCGAGCATGGAGAATAGGCCAGAAGAAGCAAGTGACTGTGTACAGGCTCCTGACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR CCA 72 bp ACTCCTTCTCCACGTCAACGAGCTGGGAGGCACGGCTaGCCTCATGGATGGCATTGTCCACCTGCTGAAGCA +
Preference number: 3 (lower is better)
Translates to: TPSPRQRAGRHG*PHGWHCPPAEA
Trigger: TGCTTCAGCAGGTGGACAATGCCATCCATGAGGCCAGCCGTGCCTCCCAGCTCGTTGACGTGGAGAAGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR-3UTR CAA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCTTTGCCCCCGTCAGGTaGACACCTAAGCCGCCCACC +
Preference number: 3 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVFAPVR*TPKPPT
Trigger: GGTGGGCGGCTTAGGTGTCAACCTGACGGGGGCAAA...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CAA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTCCTGCGTGTCCGTGCTaGGGTTCCAGTCTGGGTCAT +
Preference number: 3 (lower is better)
Translates to: LASQPARKGNVKESAYPAPACPC*GSSLGH
Trigger: ATGACCCAGACTGGAACCCAAGCACGGACACGCAGG...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR GCA 72 bp ATGGTGCCCGCAGTCAGGAGCCTGTACACAGTCACTTaGTTCTTCTGGCCTATTCTCCATGCTCGCTCCCGG +
Preference number: 3 (lower is better)
Translates to: MVPAVRSLYTVT*FFWPILHARSR
Trigger: CCGGGAGCGAGCATGGAGAATAGGCCAGAAGAAGCAAGTGACTGTGTACAGGCTCCTGACTGCGGGCACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR GCA 72 bp TGCTTTCAGGGCATCCTGGGCCACTCGGTTGGCTTCTaGCTCCACCAGTACATAATCTGGGCTGGCTCCATC +
Preference number: 3 (lower is better)
Translates to: CFQGILGHSVGF*LHQYIIWAGSI
Trigger: GATGGAGCCAGCCCAGATTATGTACTGGTGGAGGCAGAAGCCAACCGAGTGGCCCAGGATGCCCTGAAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR TCA 72 bp GATGGCCCCGGCTCTGCATCCTCCTCCAGACTGGCGTaGTCTAGTTCAATTTTCACCTCTGCTCCTCCAAGG +
Preference number: 3 (lower is better)
Translates to: DGPGSASSSRLA*SSSIFTSAPPR
Trigger: CCTTGGAGGAGCAGAGGTGAAAATTGAACTAGATCACGCCAGTCTGGAGGAGGATGCAGAGCCGGGGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR CCA 72 bp CAAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTaGAGAGAAGACAGCCTGCCAGCCTGCAGACAAGAG +
Preference number: 3 (lower is better)
Translates to: QGMQRQAQDEGN*REDSLPACRQE
Trigger: CTCTTGTCTGCAGGCTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR CCA 72 bp AGTTTCTCATCTCCACCAGAAGGTCATCGTGTTCTGTaGTGGGCAGCAGGGCAGAAGCTTCCTGCAGGTGCC +
Preference number: 3 (lower is better)
Translates to: SFSSPPEGHRVL*WAAGQKLPAGA
Trigger: GGCACCTGCAGGAAGCTTCTGCCCTGCTGCCCACCACAGAACACGATGACCTTCTGGTGGAGATGAGAAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR CCA 72 bp TGCAGTATCTCCCTGGTGCTGGCCTGGCCATCAGTGTaGGCCTGGAAAGCGATGAAGTTTCTCATCTCCACC +
Preference number: 3 (lower is better)
Translates to: CSISLVLAWPSV*AWKAMKFLIST
Trigger: GGTGGAGATGAGAAACTTCATCGCTTTCCAGGCCCACACTGATGGCCAGGCCAGCACCAGGGAGATACTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR CCA 72 bp GACTGGATGGCCCCGGCTCTGCATCCTCCTCCAGACTaGCGTGATCTAGTTCAATTTTCACCTCTGCTCCTC +
Preference number: 3 (lower is better)
Translates to: DWMAPALHPPPD*RDLVQFSPLLL
Trigger: GAGGAGCAGAGGTGAAAATTGAACTAGATCACGCCAGTCTGGAGGAGGATGCAGAGCCGGGGCCATCCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR GCA 72 bp CCAAACCGCAGAAACAAGAAAGCCCGTCGCAAGGAATaGAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAG +
Preference number: 3 (lower is better)
Translates to: PNRRNKKARRKE*KGRRKTKATGE
Trigger: CTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTTGCGACGGGCTTTCTTGTTTCTGCGGTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CAA 90 bp AGAAGACAGCCTGCCAGCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCAGGAACAAGGACCACCTaGCTCCTACTGCATTATAGC +
Preference number: 3 (lower is better)
Translates to: RRQPASLQTREAWSGVTSGTRTT*LLLHYS
Trigger: GCTATAATGCAGTAGGAGCAAGGTGGTCCTTGTTCC...TGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR TCA 72 bp TGCTGGCCTGGCCATCAGTGTGGGCCTGGAAAGCGATaGAGTTTCTCATCTCCACCAGAAGGTCATCGTGTT +
Preference number: 3 (lower is better)
Translates to: CWPGHQCGPGKR*SFSSPPEGHRV
Trigger: AACACGATGACCTTCTGGTGGAGATGAGAAACTTCATCGCTTTCCAGGCCCACACTGATGGCCAGGCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR CCA 72 bp CACTCGGTTGGCTTCTGCCTCCACCAGTACATAATCTaGGCTGGCTCCATCCATGATGGCATCGTGCTTCAT +
Preference number: 3 (lower is better)
Translates to: HSVGFCLHQYII*AGSIHDGIVLH
Trigger: ATGAAGCACGATGCCATCATGGATGGAGCCAGCCCAGATTATGTACTGGTGGAGGCAGAAGCCAACCGAGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR CCA 72 bp CAGATAACTTGGATTCAAACTCCTGCAGTATCTCCCTaGTGCTGGCCTGGCCATCAGTGTGGGCCTGGAAAG +
Preference number: 3 (lower is better)
Translates to: QITWIQTPAVSP*CWPGHQCGPGK
Trigger: CTTTCCAGGCCCACACTGATGGCCAGGCCAGCACCAGGGAGATACTGCAGGAGTTTGAATCCAAGTTATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR CCA 72 bp GACGGAGCTCTGTTTTCTTGGCTGCACCCACTGAAATaGGAGGGAGGGAGTGAGTGTGTTGTGGCTGAAATG +
Preference number: 3 (lower is better)
Translates to: DGALFSWLHPLK*EGGSECVVAEM
Trigger: CATTTCAGCCACAACACACTCACTCCCTCCCTCCCATTTCAGTGGGTGCAGCCAAGAAAACAGAGCTCCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681659.1
3UTR CCA 72 bp CTCTTGCCACTTGAAGCTGGAGGGGATAAGAAATGCTaGCATCTTGCCCCTCCCTGTGAGGTACCATACCTC +
Preference number: 3 (lower is better)
Translates to: LLPLEAGGDKKC*HLAPPCEVPYL
Trigger: GAGGTATGGTACCTCACAGGGAGGGGCAAGATGCCAGCATTTCTTATCCCCTCCAGCTTCAAGTGGCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681659.1
3UTR-3UTR CAA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGCATCACTTCCATCTCTaGAGATGCCAGGTCACTACT +
Preference number: 3 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWHHFHL*RCQVTT
Trigger: AGTAGTGACCTGGCATCTCAAGAGATGGAAGTGATG...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CAA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGGGAACTTCTTGCGTTTaGGAACATCATGGTCTGCTC +
Preference number: 3 (lower is better)
Translates to: ECKGRRKTKATGEKTACQGTSCV*EHHGLL
Trigger: GAGCAGACCATGATGTTCCAAAACGCAAGAAGTTCC...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CAA 90 bp AGAAGACAGCCTGCCAGCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATTCTACTTAACTGCATaGTTCTCCAAGTCCCTCCAG +
Preference number: 3 (lower is better)
Translates to: RRQPASLQTREAWSGVTSFYLTA*FSKSLQ
Trigger: CTGGAGGGACTTGGAGAACAATGCAGTTAAGTAGAA...TGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CAA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCGAAGCAGGGAACTTCTaGCGTTTTGGAACATCATGG +
Preference number: 3 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVEAGNF*RFGTSW
Trigger: CCATGATGTTCCAAAACGCAAGAAGTTCCCTGCTTC...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CAA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTCATCACTTCCATCTCTaGAGATGCCAGGTCACTACT +
Preference number: 3 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLHHFHL*RCQVTT
Trigger: AGTAGTGACCTGGCATCTCAAGAGATGGAAGTGATG...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CAA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTACTGTTGGCAAGGGTTaGGAGAAATGGGTCCTTTTA +
Preference number: 3 (lower is better)
Translates to: LASQPARKGNVKESAYPATVGKG*EKWVLL
Trigger: TAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGT...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CAA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCATGGATGTGTCCTCATaGTATCTCGTAATCAGTGGC +
Preference number: 3 (lower is better)
Translates to: KECKGRRKTKATGEKTACMDVSS*YLVISG
Trigger: GCCACTGATTACGAGATACAATGAGGACACATCCAT...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR GCA 72 bp CTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTaGATACCCTGCTTCTTTAAAGGGCCAATTGGGAAG +
Preference number: 3 (lower is better)
Translates to: LPASKKGECQGE*IPCFFKGPIGK
Trigger: CTTCCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR GCA 72 bp TCTCCTTCCTCAACACATCACTTCCATCTCTTGAGATaGCAGGTCACTACTGAAGCTCCCATTGGCCTCCCA +
Preference number: 3 (lower is better)
Translates to: SPSSTHHFHLLR*QVTTEAPIGLP
Trigger: TGGGAGGCCAATGGGAGCTTCAGTAGTGACCTGGCATCTCAAGAGATGGAAGTGATGTGTTGAGGAAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR GCA 72 bp CAAGACTGTGATGCAGATAACTTGGATTCAAACTCCTaGAGTATCTCCCTGGTGCTGGCCTGGCCATCAGTG +
Preference number: 3 (lower is better)
Translates to: QDCDADNLDSNS*SISLVLAWPSV
Trigger: CACTGATGGCCAGGCCAGCACCAGGGAGATACTGCAGGAGTTTGAATCCAAGTTATCTGCATCACAGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR GCA 72 bp TCCCCAGAACTTGGGAAAAAGTCATCATCAATCTCCTaGACTGGCACTTTCTTCTGCCGTTTCCCGCCCTTG +
Preference number: 3 (lower is better)
Translates to: SPELGKKSSSIS*TGTFFCRFPPL
Trigger: CAAGGGCGGGAAACGGCAGAAGAAAGTGCCAGTGCAGGAGATTGATGATGACTTTTTCCCAAGTTCTGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR CCA 72 bp AGAACTTGGGAAAAAGTCATCATCAATCTCCTGCACTaGCACTTTCTTCTGCCGTTTCCCGCCCTTGGGCAG +
Preference number: 3 (lower is better)
Translates to: RTWEKVIINLLH*HFLLPFPALGQ
Trigger: CTGCCCAAGGGCGGGAAACGGCAGAAGAAAGTGCCAGTGCAGGAGATTGATGATGACTTTTTCCCAAGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR-3UTR CAA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGAAAACCGCCTTTGTTTaGGGTCTTTTAGCACTCTAT +
Preference number: 3 (lower is better)
Translates to: ECKGRRKTKATGEKTACQKTAFV*GLLALY
Trigger: ATAGAGTGCTAAAAGACCCAAAACAAAGGCGGTTTT...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CAA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTCTGTTCCTGAAGAATTaGAACATTCCCCATTTCCAC +
Preference number: 3 (lower is better)
Translates to: PARRHGNNVSDLHTETPPLFLKN*NIPHFH
Trigger: GTGGAAATGGGGAATGTTCAAATTCTTCAGGAACAG...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CAA 90 bp AACACCAGACACTGCTCCCAGACACCGCTGACGAGAGAGCCTCAGTGCTTTCAGGATGGCATAGAAGTTTaGCCTGTTCCTGAAGAATTT +
Preference number: 3 (lower is better)
Translates to: NTRHCSQTPLTREPQCFQDGIEV*PVPEEF
Trigger: AAATTCTTCAGGAACAGGCAAAACTTCTATGCCATC...CTGAAAGCACTGAGGCTCTCTCGTCAGCGGTGTCTGGGAGCAGTGTCTGGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CAA 90 bp ATAATCTTCATCTCCATCATCTCGGTATCTTCCCACTTTCCGACCTCCTCCTCCAAGGTCTCCTTGCCTTaGGCAATCCCACTTTCCCCT +
Preference number: 3 (lower is better)
Translates to: IIFISIISVSSHFPTSSSKVSLP*AIPLSP
Trigger: AGGGGAAAGTGGGATTGCCAAAGGCAAGGAGACCTT...GGAGGAGGAGGTCGGAAAGTGGGAAGATACCGAGATGATGGAGATGAAGATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR TCA 72 bp CAACTTCTCCTTCCTCAACACATCACTTCCATCTCTTaGGATGCCAGGTCACTACTGAAGCTCCCATTGGCC +
Preference number: 3 (lower is better)
Translates to: QLLLPQHITSIS*DARSLLKLPLA
Trigger: GGCCAATGGGAGCTTCAGTAGTGACCTGGCATCTCAAGAGATGGAAGTGATGTGTTGAGGAAGGAGAAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CAA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGCAATTTACCAGTACCTaGAAAAGAGGATCTTTCCAA +
Preference number: 3 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWQFTST*KRGSFQ
Trigger: TTGGAAAGATCCTCTTTTCAAGGTACTGGTAAATTG...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CAA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGAGGCAGACTATTGCTaGAACATTTTTAATGGTGAT +
Preference number: 3 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWEADYC*NIFNGD
Trigger: ATCACCATTAAAAATGTTCAAGCAATAGTCTGCCTC...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CAA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACTCCTTGGCCTCACTCTaGTTTTCACTGTCTTGCTTC +
Preference number: 3 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHSLASL*FSLSCF
Trigger: GAAGCAAGACAGTGAAAACAAGAGTGAGGCCAAGGA...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CAA 90 bp TTGGGAAAAAGTCATCATCAATCTCCTGCACTGGCACTTTCTTCTGCCGTTTCCACTCCCAAGGTCTCCTaGCCTTTGGCAATCCCACTT +
Preference number: 3 (lower is better)
Translates to: LGKSHHQSPALALSSAVSTPKVS*PLAIPL
Trigger: AAGTGGGATTGCCAAAGGCAAGGAGACCTTGGGAGT...GGAAACGGCAGAAGAAAGTGCCAGTGCAGGAGATTGATGATGACTTTTTCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR CCA 72 bp GTCTTGCTTCTGGTAACGCCTTTTCTTCACCAGGTGTaGAATTCGAGTTCCTTCAAACTTGGCGTCTCTGCA +
Preference number: 3 (lower is better)
Translates to: VLLLVTPFLHQV*NSSSFKLGVSA
Trigger: TGCAGAGACGCCAAGTTTGAAGGAACTCGAATTCCACACCTGGTGAAGAAAAGGCGTTACCAGAAGCAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CAA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAATTTACCAGTACCTaGAAAAGAGGATCTTTCCAA +
Preference number: 3 (lower is better)
Translates to: KECKGRRKTKATGEKTACQFTST*KRGSFQ
Trigger: TTGGAAAGATCCTCTTTTCAAGGTACTGGTAAATTG...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CAA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTCAATTTACCAGTACCTaGAAAAGAGGATCTTTCCAA +
Preference number: 3 (lower is better)
Translates to: PARRHGNNVSDLHTETPPQFTST*KRGSFQ
Trigger: TTGGAAAGATCCTCTTTTCAAGGTACTGGTAAATTG...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CAA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGGGAACAAGGACCACCTaGCTCCTACTGCATTATAGC +
Preference number: 3 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRGTRTT*LLLHYS
Trigger: GCTATAATGCAGTAGGAGCAAGGTGGTCCTTGTTCC...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CAA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACCTGCAAAAATTGCACTaGTTTCAGTGCTCTGGGATG +
Preference number: 3 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHLQKLH*FQCSGM
Trigger: CATCCCAGAGCACTGAAACAAGTGCAATTTTTGCAG...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CAA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGGAGATACAAACAGCCTaGGCTGGAATCCAAACCGCA +
Preference number: 3 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWREIQTA*AGIQTA
Trigger: TGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTC...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CAA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGTTCTACTTAACTGCATaGTTCTCCAAGTCCCTCCAG +
Preference number: 3 (lower is better)
Translates to: KGECQGECIPCFFKGPIGFYLTA*FSKSLQ
Trigger: CTGGAGGGACTTGGAGAACAATGCAGTTAAGTAGAA...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CAA 90 bp TTGGGAAAAAGTCATCATCAATCTCCTGCACTGGCACTTTCTTCTGCCGTTTCCTGGTTTGTTTTTATTTaGCACTGGGGCTGGAGGCGT +
Preference number: 3 (lower is better)
Translates to: LGKSHHQSPALALSSAVSWFVFI*HWGWRR
Trigger: ACGCCTCCAGCCCCAGTGCAAAATAAAAACAAACCA...GGAAACGGCAGAAGAAAGTGCCAGTGCAGGAGATTGATGATGACTTTTTCCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000679596.1
3UTR-3UTR CAA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACGATAGTATTTGCTACTaGAAGAGGAGGCTATACCTT +
Preference number: 3 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHDSICY*KRRLYL
Trigger: AAGGTATAGCCTCCTCTTCAAGTAGCAAATACTATC...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CAA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGCCTGTACACAGTCACTaGCTTCTTCTGGCCTATTCT +
Preference number: 3 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRPVHSH*LLLAYS
Trigger: AGAATAGGCCAGAAGAAGCAAGTGACTGTGTACAGG...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR TCA 72 bp GCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGGTaGATTGATGCAAGCAATTCTGCTACATCCACTGAC +
Preference number: 3 (lower is better)
Translates to: ARVWRNGSFYGG*IDASNSATSTD
Trigger: GTCAGTGGATGTAGCAGAATTGCTTGCATCAATTCACCCTCCATAAAAGGACCCATTTCTCCAAACCCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CAA 90 bp TGTCTCTTCTCCAAGCCTATCATTGCTAGTTACATTACTACTCATGTGAGGGTCTCATCAGGAAGACCTTaGAGATTCTTGGGACCTCCA +
Preference number: 3 (lower is better)
Translates to: CLFSKPIIASYITTHVRVSSGRP*RFLGPP
Trigger: TGGAGGTCCCAAGAATCTCAAAGGTCTTCCTGATGA...GACCCTCACATGAGTAGTAATGTAACTAGCAATGATAGGCTTGGAGAAGAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CAA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGTGTGATGCAGATAACTaGGATTCAAACTCCTGCAGT +
Preference number: 3 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRCDADN*DSNSCS
Trigger: ACTGCAGGAGTTTGAATCCAAGTTATCTGCATCACA...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR GCA 72 bp GGAATTCGAGTTCCTTCAAACTTGGCGTCTCTGCAATaGTTAGAGTTCTTAGGCTTTTGCTTTGGTCTCAGA +
Preference number: 3 (lower is better)
Translates to: GIRVPSNLASLQ*LEFLGFCFGLR
Trigger: TCTGAGACCAAAGCAAAAGCCTAAGAACTCTAAGCATTGCAGAGACGCCAAGTTTGAAGGAACTCGAATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR CCA 72 bp CCAGTTCCTGCAAAAATTGCACTTGTTTCAGTGCTCTaGGATGCATCAGGACTAGTCAGAGTAAATAGCTCA +
Preference number: 3 (lower is better)
Translates to: PVPAKIALVSVL*DASGLVRVNSS
Trigger: TGAGCTATTTACTCTGACTAGTCCTGATGCATCCCAGAGCACTGAAACAAGTGCAATTTTTGCAGGAACTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CAA 90 bp GTAGTGAGATACAAACAGCCTTGGCTGGAATCCAAACCGCAGAAACAAGAAAGCGATAGTATTTGCTACTaGAAGAGGAGGCTATACCTT +
Preference number: 3 (lower is better)
Translates to: VVRYKQPWLESKPQKQESDSICY*KRRLYL
Trigger: AAGGTATAGCCTCCTCTTCAAGTAGCAAATACTATC...GCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CAA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGGGAACAAGGACCACCTaGCTCCTACTGCATTATAGC +
Preference number: 3 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLGTRTT*LLLHYS
Trigger: GCTATAATGCAGTAGGAGCAAGGTGGTCCTTGTTCC...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CAA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCATTTATGGAGGGTGAATaGATGCAAGCAATTCTGCTA +
Preference number: 3 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSFMEGE*MQAILL
Trigger: TAGCAGAATTGCTTGCATCAATTCACCCTCCATAAA...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CAA 90 bp TGTCTCTTCTCCAAGCCTATCATTGCTAGTTACATTACTACTCATGTGAGGGTCAGACCTTTGAGATTCTaGGGACCTCCAGAAAAGAGA +
Preference number: 3 (lower is better)
Translates to: CLFSKPIIASYITTHVRVRPLRF*GPPEKR
Trigger: TCTCTTTTCTGGAGGTCCCAAGAATCTCAAAGGTCT...GACCCTCACATGAGTAGTAATGTAACTAGCAATGATAGGCTTGGAGAAGAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CAA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGCAGTTCCTGCAAAAATaGCACTTGTTTCAGTGCTCT +
Preference number: 3 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRQFLQK*HLFQCS
Trigger: AGAGCACTGAAACAAGTGCAATTTTTGCAGGAACTG...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CAA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGTCTCCAAGCCTATCATaGCTAGTTACATTACTACTC +
Preference number: 3 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRSPSLS*LVTLLL
Trigger: GAGTAGTAATGTAACTAGCAATGATAGGCTTGGAGA...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR TCA 72 bp AAGACTGATATAGACAATTATGCCCAGAGCCAAGAATaGAAGGTGTGTGCAGAGCAGGAAGCAGAATTAGTC +
Preference number: 3 (lower is better)
Translates to: KTDIDNYAQSQE*KVCAEQEAELV
Trigger: GACTAATTCTGCTTCCTGCTCTGCACACACCTTTCATTCTTGGCTCTGGGCATAATTGTCTATATCAGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680107.1
3UTR GCA 72 bp AGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTaGTTCTTTAAAGGGCCAATTGGGAAGTTTAAAACT +
Preference number: 3 (lower is better)
Translates to: SKKGECQGECIP*FFKGPIGKFKT
Trigger: AGTTTTAAACTTCCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR GCA 72 bp ATTCCTAGGACAGTGGGTCCACAGGGCCCTTCACATTaGCATTCTGGAAGTGAAAATCTAAAAGATATTTCA +
Preference number: 3 (lower is better)
Translates to: IPRTVGPQGPSH*HSGSENLKDIS
Trigger: TGAAATATCTTTTAGATTTTCACTTCCAGAATGGCAATGTGAAGGGCCCTGTGGACCCACTGTCCTAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
3UTR GCA 72 bp TCCTGGCACTTCTCTGTTGGAGATGTTGATGAAGGATaGTGCACAGAGAAGTTAGAATTCCTTTTCTTACCA +
Preference number: 3 (lower is better)
Translates to: SWHFSVGDVDEG*CTEKLEFLFLP
Trigger: TGGTAAGAAAAGGAATTCTAACTTCTCTGTGCAGCATCCTTCATCAACATCTCCAACAGAGAAGTGCCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR CCA 72 bp TACAGATATGTTAGAAGCAGGGAACTTCTTGCGTTTTaGAACATCATGGTCTGCTCCAAAGGCTGGTTGAAT +
Preference number: 3 (lower is better)
Translates to: YRYVRSRELLAF*NIMVCSKGWLN
Trigger: ATTCAACCAGCCTTTGGAGCAGACCATGATGTTCCAAAACGCAAGAAGTTCCCTGCTTCTAACATATCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CAA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATGAGATACAAACAGCCTaGGCTGGAATCCAAACCGCA +
Preference number: 3 (lower is better)
Translates to: IYIINPTILCRQSYTYRNEIQTA*AGIQTA
Trigger: TGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTC...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CAA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGGATAGTATTTGCTACTaGAAGAGGAGGCTATACCTT +
Preference number: 3 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRDSICY*KRRLYL
Trigger: AAGGTATAGCCTCCTCTTCAAGTAGCAAATACTATC...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CAA 90 bp GCATTCTGTAGTATGATAGGTTTTCTATTTCAGACAGCTAAGAATGCCTTACAGCTTTCCCCGAATAAATaGTTTGCACCCGTGACGACC +
Preference number: 3 (lower is better)
Translates to: AFCSMIGFLFQTAKNALQLSPNK*FAPVTT
Trigger: GGTCGTCACGGGTGCAAACAATTTATTCGGGGAAAG...CTGTAAGGCATTCTTAGCTGTCTGAAATAGAAAACCTATCATACTACAGAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680107.1
3UTR TCA 72 bp TGTGTCCTCATTGTATCTCGTAATCAGTGGCTGTCTTaGAGCTATTGTAGTGGTACCATCCATCTTGAGATA +
Preference number: 3 (lower is better)
Translates to: CVLIVSRNQWLS*SYCSGTIHLEI
Trigger: TATCTCAAGATGGATGGTACCACTACAATAGCTTCAAGACAGCCACTGATTACGAGATACAATGAGGACACA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CAA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGGAGGCAGACTATTGCTaGAACATTTTTAATGGTGAT +
Preference number: 3 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWREADYC*NIFNGD
Trigger: ATCACCATTAAAAATGTTCAAGCAATAGTCTGCCTC...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CAA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGGTCCAGATACTGCATTaGTCTCTTCTCCAAGCCTAT +
Preference number: 3 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLVQILH*SLLQAY
Trigger: ATAGGCTTGGAGAAGAGACAAATGCAGTATCTGGAC...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CAA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGTCATTGCTCTGTTCCTaGGCCTCACTCTTGTTTTCA +
Preference number: 3 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLSLLCS*ASLLFS
Trigger: TGAAAACAAGAGTGAGGCCAAGGAACAGAGCAATGA...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR-3UTR CAA 90 bp GAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTGCTCTATTGTATGTTGCAAGGATCATaGTACACAGAGCAGTTTAAA +
Preference number: 3 (lower is better)
Translates to: EVTYRGAQNSKQTLLLYCMLQGS*YTEQFK
Trigger: TTTAAACTGCTCTGTGTACAATGATCCTTGCAACAT...ACAATAGAGCAGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680107.1
3UTR-3UTR CAA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATTTCTACTTAACTGCATaGTTCTCCAAGTCCCTCCAG +
Preference number: 3 (lower is better)
Translates to: IYIINPTILCRQSYTYRNFYLTA*FSKSLQ
Trigger: CTGGAGGGACTTGGAGAACAATGCAGTTAAGTAGAA...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR TCA 72 bp ACAATCATTTTCCCAGAACGTTTCCAGTACCCAAACTaGTCTTCTTCTAGTTCATCATCAGGAAGACCTTTG +
Preference number: 3 (lower is better)
Translates to: TIIFPERFQYPN*SSSSSSSGRPL
Trigger: CAAAGGTCTTCCTGATGATGAACTAGAAGAAGATCAGTTTGGGTACTGGAAACGTTCTGGGAAAATGATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR CCA 72 bp ACAAAACAACCTATCGATATTGATACCACTTACTGTTaGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAG +
Preference number: 3 (lower is better)
Translates to: TKQPIDIDTTYC*QGFGEMGPFME
Trigger: CTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR GCA 72 bp AGACAAAAACTGGAACAAGGACCACCTTGCTCCTACTaGATTATAGCTTTTGATAGTATTTGCTACTTGAAG +
Preference number: 3 (lower is better)
Translates to: RQKLEQGPPCSY*IIAFDSICYLK
Trigger: CTTCAAGTAGCAAATACTATCAAAAGCTATAATGCAGTAGGAGCAAGGTGGTCCTTGTTCCAGTTTTTGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CAA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGAGGAGGCTATACCTaGTCTAGCTCAATACAGTTT +
Preference number: 3 (lower is better)
Translates to: ETFPYIICKLVKVALYIRRGGYT*SSSIQF
Trigger: AAACTGTATTGAGCTAGACAAGGTATAGCCTCCTCT...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
3UTR GCA 72 bp AGAGCATGCCAGAGAATACAAATCCAAGAAACAAACTaGACTAAGACAGCTAAGAAGAAATTTCAGGAATAC +
Preference number: 3 (lower is better)
Translates to: RACQRIQIQETN*TKTAKKKFQEY
Trigger: GTATTCCTGAAATTTCTTCTTAGCTGTCTTAGTGCAGTTTGTTTCTTGGATTTGTATTCTCTGGCATGCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR-3UTR CAA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGGAGGCAGACTATTGCTaGAACATTTTTAATGGTGAT +
Preference number: 3 (lower is better)
Translates to: ETFPYIICKLVKVALYIREADYC*NIFNGD
Trigger: ATCACCATTAAAAATGTTCAAGCAATAGTCTGCCTC...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
3UTR GCA 72 bp AATTCTGAGGTAGACATCATGCAAACAAACATCAAGTaGAGCCAACTTCCATTGACAAACATGATTATTAAT +
Preference number: 3 (lower is better)
Translates to: NSEVDIMQTNIK*SQLPLTNMIIN
Trigger: ATTAATAATCATGTTTGTCAATGGAAGTTGGCTGCACTTGATGTTTGTTTGCATGATGTCTACCTCAGAATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR CCA 72 bp AACACTAATAGGCAATGTACGGTAGAGATCTACAAATaGCCAATAAACATGGAAATGTTTGATTTTGTACGT +
Preference number: 3 (lower is better)
Translates to: NTNRQCTVEIYK*PINMEMFDFVR
Trigger: ACGTACAAAATCAAACATTTCCATGTTTATTGGCCATTTGTAGATCTCTACCGTACATTGCCTATTAGTGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGCGCCGCCAGCCGCCTTaGAACCCAGCTCGACGGGCC +
Preference number: 4 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWRRQPP*NPARRA
Trigger: GGCCCGTCGAGCTGGGTTCCAAGGCGGCTGGCGGCG...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp GCTTCAGCTCATAGTCAGTACCATCTCCAGACAGGTCCGCCTCTGCCCCCTCCAAGACAGGTCCGCCTCTaGCCCCTCCACCTCGTCATC +
Preference number: 4 (lower is better)
Translates to: ASAHSQYHLQTGPPLPPPRQVRL*PLHLVI
Trigger: GATGACGAGGTGGAGGGGGCAGAGGCGGACCTGTCT...TGGAGGGGGCAGAGGCGGACCTGTCTGGAGATGGTACTGACTATGAGCTGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR GCA 90 bp CCCTGTGGCCAGTCCAGGTGGGAACACCAGACACTGCTCCCAGACACCGCTGACAGGGCAGAAGCTTCCTaGAGGTGCCCGCTTTCACTT +
Preference number: 4 (lower is better)
Translates to: PCGQSRWEHQTLLPDTADRAEAS*RCPLSL
Trigger: AAGTGAAAGCGGGCACCTGCAGGAAGCTTCTGCCCT...GTCAGCGGTGTCTGGGAGCAGTGTCTGGTGTTCCCACCTGGACTGGCCACAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR GCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGGGGCCTGCGTGTCCGTaGTTGGGTTCCAGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: ECKGRRKTKATGEKTACQGPACP*LGSSLG
Trigger: ACCCAGACTGGAACCCAAGCACGGACACGCAGGCCC...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTGACTCCGACTTCTGCTaGTGCGGGGAGGCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLDSDFC*CGEARG
Trigger: GCCACGGGCCTCCCCGCACCAGCAGAAGTCGGAGTC...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355832.10
CDS-3UTR CCA 90 bp CTCCCTGTTCCAGCACGTCCTGGTCATAGACGTCCACACCCAAACCCTGCAGCTGGCTGGAGGCGTGACTaGGGCTGGAGCTTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: LPVPARPGHRRPHPNPAAGWRRD*GWSFSS
Trigger: GCTAGAAAAGCTCCAGCCCCAGTCACGCCTCCAGCC...AGCTGCAGGGTTTGGGTGTGGACGTCTATGACCAGGACGTGCTGGAACAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR TCA 90 bp CTGAGGGATCTGGGTACCAAAAGGTGTCATCTGGCCAGTGCGGATGAGCTCTTCTCTCCTCGGAGCTGCTaGTGCGCACCCCACAGCAGA +
Preference number: 4 (lower is better)
Translates to: LRDLGTKRCHLASADELFSPRSC*CAPHSR
Trigger: TCTGCTGTGGGGTGCGCATCAGCAGCTCCGAGGAGA...GAAGAGCTCATCCGCACTGGCCAGATGACACCTTTTGGTACCCAGATCCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR TCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGTCTGGCCAGTGCGGATaGGCTCTTCCCAGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: ECKGRRKTKATGEKTACQSGQCG*ALPRQS
Trigger: AGACTGCCTGGGAAGAGCTCATCCGCACTGGCCAGA...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTGCTCCCAGACACCGCTaGCGAGAGAGCCTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: LASQPARKGNVKESAYPAAPRHR*RESLSA
Trigger: AGCACTGAGGCTCTCTCGTCAGCGGTGTCTGGGAGC...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGAGCGAGGGGCCCGGATaGAGAGTCTGCATCTTCTGC +
Preference number: 4 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWSEGPG*RVCIFC
Trigger: GCAGAAGATGCAGACTCTTCATCCGGGCCCCTCGCT...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AGAAGACAGCCTGCCAGCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCACTTGGCTGCACCCACTaGAATGGGAGGGAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: RRQPASLQTREAWSGVTSLGCTH*NGREGV
Trigger: CACTCCCTCCCTCCCATTTCAGTGGGTGCAGCCAAG...TGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR GCA 90 bp ATCTGGGTACCAAAAGGTGTCATCTGGCCAGTGCGGATGAGCTCTTCCCAGGCATCCACACCCAAACCCTaGAGCTCAAGGGCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: IWVPKGVIWPVRMSSSQASTPKP*SSRAWA
Trigger: CGCCCAGGCCCTTGAGCTGCAGGGTTTGGGTGTGGA...TGCCTGGGAAGAGCTCATCCGCACTGGCCAGATGACACCTTTTGGTACCCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR GCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTAGACAGGTCCGCCTCTaGCCCCTCCACCTCGTCATC +
Preference number: 4 (lower is better)
Translates to: LASQPARKGNVKESAYPARQVRL*PLHLVI
Trigger: GATGACGAGGTGGAGGGGGCAGAGGCGGACCTGTCT...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGGGAACACCAGACACTaGTCCCAGACACCGCTGACG +
Preference number: 4 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWGNTRH*SQTPLT
Trigger: CGTCAGCGGTGTCTGGGAGCAGTGTCTGGTGTTCCC...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp GGGAAATACTCAGACTCTTCACCCTCAGAGTCTCCCTCTGCCTCTGGCCTCATGACCCCACAGCAGAGGTaGACAGCCCGTCACCCACAG +
Preference number: 4 (lower is better)
Translates to: GKYSDSSPSESPSASGLMTPQQR*TARHPQ
Trigger: CTGTGGGTGACGGGCTGTCCACCTCTGCTGTGGGGT...CATGAGGCCAGAGGCAGAGGGAGACTCTGAGGGTGAAGAGTCTGAGTATTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR CCA 90 bp ATCTGGGTACCAAAAGGTGTCATCTGGCCAGTGCGGATGAGCTCTTCCCAGGCATGCAGCTCAAGGGCCTaGGCGCTAGGCTCTACTGCC +
Preference number: 4 (lower is better)
Translates to: IWVPKGVIWPVRMSSSQACSSRA*ALGSTA
Trigger: GGCAGTAGAGCCTAGCGCCCAGGCCCTTGAGCTGCA...TGCCTGGGAAGAGCTCATCCGCACTGGCCAGATGACACCTTTTGGTACCCAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR CCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCTGCAGCTCAAGGGCCTaGGCGCTAGGCTCTACTGCC +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVCSSRA*ALGSTA
Trigger: GGCAGTAGAGCCTAGCGCCCAGGCCCTTGAGCTGCA...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCCACGTCAACGAGCTaGGAGGCACGGCTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: LASQPARKGNVKESAYPASTSTS*EARLAS
Trigger: TGAGGCCAGCCGTGCCTCCCAGCTCGTTGACGTGGA...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp GGGAAATACTCAGACTCTTCACCCTCAGAGTCTCCCTCTGCCTCTGGCCTCATGGCTGCCAAGACTGGATaGCCCCGGCTCTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: GKYSDSSPSESPSASGLMAAKTG*PRLCIL
Trigger: GAGGATGCAGAGCCGGGGCCATCCAGTCTTGGCAGC...CATGAGGCCAGAGGCAGAGGGAGACTCTGAGGGTGAAGAGTCTGAGTATTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR CCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGGCATGCTGCCAAGACTaGATGGCCCCGGCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: ECKGRRKTKATGEKTACQACCQD*MAPALH
Trigger: ATGCAGAGCCGGGGCCATCCAGTCTTGGCAGCATGC...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGCCTGGGCCACTCGGTTaGCTTCTGCCTCCACCAGTA +
Preference number: 4 (lower is better)
Translates to: ECKGRRKTKATGEKTACQPGPLG*LLPPPV
Trigger: TACTGGTGGAGGCAGAAGCCAACCGAGTGGCCCAGG...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp CCTGTGAGGTACCATACCTCTGGACAGGGAGCTGAGGGAGACGGAGCTCTGTTTGTATCTCCCTGGTGCTaGCCTGGCCATCAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: PVRYHTSGQGAEGDGALFVSPWC*PGHQCG
Trigger: CCCACACTGATGGCCAGGCCAGCACCAGGGAGATAC...AAACAGAGCTCCGTCTCCCTCAGCTCCCTGTCCAGAGGTATGGTACCTCACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR CCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGGGAACAGGTGCAAGATaGTGTGGGGGTGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: ECKGRRKTKATGEKTACQGTGAR*CGGGEA
Trigger: TGCCTCCCCACCCCCACACCATCTTGCACCTGTTCC...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTCTCCTCGGAGCTGCTaGTGCGCACCCCACAGCAGA +
Preference number: 4 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLSPRSC*CAPHSR
Trigger: TCTGCTGTGGGGTGCGCATCAGCAGCTCCGAGGAGA...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp CTCCCTGTTCCAGCACGTCCTGGTCATAGACGTCCACACCCAAACCCTGCAGCTTCTACTGCCTGGATCTaGTGTCGGTCGATGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LPVPARPGHRRPHPNPAASTAWI*CRSMCS
Trigger: GCTGCACATCGACCGACATCAGATCCAGGCAGTAGA...AGCTGCAGGGTTTGGGTGTGGACGTCTATGACCAGGACGTGCTGGAACAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR TCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGTCTCCTGGACAGGCATaGGCATGCTGCCAAGACTGG +
Preference number: 4 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWSPGQA*ACCQDW
Trigger: CCAGTCTTGGCAGCATGCTCATGCCTGTCCAGGAGA...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp TGCCACTTGAAGCTGGAGGGGATAAGAAATGCTGGCATCTTGCCCCTCCCTGTGTCTGGCCAGTGCGGATaGGCTCTTCCCAGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: CHLKLEGIRNAGILPLPVSGQCG*ALPRQS
Trigger: AGACTGCCTGGGAAGAGCTCATCCGCACTGGCCAGA...CACAGGGAGGGGCAAGATGCCAGCATTTCTTATCCCCTCCAGCTTCAAGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR GCA 90 bp ATGACAACTCTGTTTGCCCCCGTCAGGTTGACACCTAAGCCGCCCACCCGCGTGGATGACAACTCTGTTTaGCCCCGTCAGGTTGACACC +
Preference number: 4 (lower is better)
Translates to: MTTLFAPVRLTPKPPTRVDDNSV*PRQVDT
Trigger: GGTGTCAACCTGACGGGGGCAAACAGAGTTGTCATC...CACGCGGGTGGGCGGCTTAGGTGTCAACCTGACGGGGGCAAACAGAGTTGTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR GCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCGACAGCCTGCCAGCCTaGAGACAAGAGAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVDSLPA*RQERPG
Trigger: TCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTC...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp GTAGTGAGATACAAACAGCCTTGGCTGGAATCCAAACCGCAGAAACAAGAAAGCCAGCTCGACGGGCCGTaGCGCCTGCGCCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: VVRYKQPWLESKPQKQESQLDGP*RLRPQL
Trigger: GAGCTGAGGGCGCAGGCGCCACGGCCCGTCGAGCTG...GCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355832.10
CDS-3UTR CCA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTGCACGGCTGGCCTCATaGATGGCATTGTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: PARRHGNNVSDLHTETPPARLAS*MALSTC
Trigger: GCAGGTGGACAATGCCATCCATGAGGCCAGCCGTGC...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCGCTGGGAGGCACGGCTaGCCTCATGGATGGCATTGT +
Preference number: 4 (lower is better)
Translates to: KECKGRRKTKATGEKTACAGRHG*PHGWHC
Trigger: ACAATGCCATCCATGAGGCCAGCCGTGCCTCCCAGC...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp CTGAGGGATCTGGGTACCAAAAGGTGTCATCTGGCCAGTGCGGATGAGCTCTTCGCTGGGAGGCACGGCTaGCCTCATGGATGGCATTGT +
Preference number: 4 (lower is better)
Translates to: LRDLGTKRCHLASADELFAGRHG*PHGWHC
Trigger: ACAATGCCATCCATGAGGCCAGCCGTGCCTCCCAGC...GAAGAGCTCATCCGCACTGGCCAGATGACACCTTTTGGTACCCAGATCCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR CCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGTCCCAGGCAGTCTCCTaGACAGGCATGAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWSQAVS*TGMSML
Trigger: CAGCATGCTCATGCCTGTCCAGGAGACTGCCTGGGA...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCGGCTGGAGGCGTGACTaGGGCTGGAGCTTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: KECKGRRKTKATGEKTACGWRRD*GWSFSS
Trigger: GCTAGAAAAGCTCCAGCCCCAGTCACGCCTCCAGCC...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp GGGAAATACTCAGACTCTTCACCCTCAGAGTCTCCCTCTGCCTCTGGCCTCATGGCCGTTTCCCGCCCTTaGGCAGAGGCTTCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: GKYSDSSPSESPSASGLMAVSRP*AEASAH
Trigger: ATGAGCTGAAGCCTCTGCCCAAGGGCGGGAAACGGC...CATGAGGCCAGAGGCAGAGGGAGACTCTGAGGGTGAAGAGTCTGAGTATTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR CCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCGCCGTTTCCCGCCCTTaGGCAGAGGCTTCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: KECKGRRKTKATGEKTACAVSRP*AEASAH
Trigger: ATGAGCTGAAGCCTCTGCCCAAGGGCGGGAAACGGC...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGTGTGGCCAGTCCAGGTaGGAACACCAGACACTGCTC +
Preference number: 4 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWCGQSR*EHQTLL
Trigger: GAGCAGTGTCTGGTGTTCCCACCTGGACTGGCCACA...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp CCTGTGAGGTACCATACCTCTGGACAGGGAGCTGAGGGAGACGGAGCTCTGTTTTGTGGCCAGTCCAGGTaGGAACACCAGACACTGCTC +
Preference number: 4 (lower is better)
Translates to: PVRYHTSGQGAEGDGALFCGQSR*EHQTLL
Trigger: GAGCAGTGTCTGGTGTTCCCACCTGGACTGGCCACA...AAACAGAGCTCCGTCTCCCTCAGCTCCCTGTCCAGAGGTATGGTACCTCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR CCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGCCAGAAATCCCCCTGTaGCCAGTCCAGGTGGGAACA +
Preference number: 4 (lower is better)
Translates to: ECKGRRKTKATGEKTACQPEIPL*PVQVGT
Trigger: TGTTCCCACCTGGACTGGCCACAGGGGGATTTCTGG...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp CCTGTGAGGTACCATACCTCTGGACAGGGAGCTGAGGGAGACGGAGCTCTGTTTGGTCATCGTGTTCTGTaGTGGGCAGCAGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PVRYHTSGQGAEGDGALFGHRVL*WAAGQK
Trigger: CTTCTGCCCTGCTGCCCACCACAGAACACGATGACC...AAACAGAGCTCCGTCTCCCTCAGCTCCCTGTCCAGAGGTATGGTACCTCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR CCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCGTATCTCCCTGGTGCTaGCCTGGCCATCAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: KECKGRRKTKATGEKTACVSPWC*PGHQCG
Trigger: CCCACACTGATGGCCAGGCCAGCACCAGGGAGATAC...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp TGCCACTTGAAGCTGGAGGGGATAAGAAATGCTGGCATCTTGCCCCTCCCTGTGCCTGCAGTATCTCCCTaGTGCTGGCCTGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: CHLKLEGIRNAGILPLPVPAVSP*CWPGHQ
Trigger: CTGATGGCCAGGCCAGCACCAGGGAGATACTGCAGG...CACAGGGAGGGGCAAGATGCCAGCATTTCTTATCCCCTCCAGCTTCAAGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR CCA 90 bp ATGACAACTCTGTTTGCCCCCGTCAGGTTGACACCTAAGCCGCCCACCCGCGTGCAAGACGAAGGCAACTaGAGAGAAGACAGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: MTTLFAPVRLTPKPPTRVQDEGN*REDSLP
Trigger: TGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTG...CACGCGGGTGGGCGGCTTAGGTGTCAACCTGACGGGGGCAAACAGAGTTGTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR TCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTGCATTGTCCACCTGCTaGAGCACTCCCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LASQPARKGNVKESAYPAALSTC*STPCSS
Trigger: GCTGGAACAGGGAGTGCTTCAGCAGGTGGACAATGC...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp ATCTGGGTACCAAAAGGTGTCATCTGGCCAGTGCGGATGAGCTCTTCCCAGGCAGCATTGTCCACCTGCTaGAGCACTCCCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: IWVPKGVIWPVRMSSSQAALSTC*STPCSS
Trigger: GCTGGAACAGGGAGTGCTTCAGCAGGTGGACAATGC...TGCCTGGGAAGAGCTCATCCGCACTGGCCAGATGACACCTTTTGGTACCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR TCA 90 bp ATCTGGGTACCAAAAGGTGTCATCTGGCCAGTGCGGATGAGCTCTTCCCAGGCATCTCCTGGACAGGCATaGGCATGCTGCCAAGACTGG +
Preference number: 4 (lower is better)
Translates to: IWVPKGVIWPVRMSSSQASPGQA*ACCQDW
Trigger: CCAGTCTTGGCAGCATGCTCATGCCTGTCCAGGAGA...TGCCTGGGAAGAGCTCATCCGCACTGGCCAGATGACACCTTTTGGTACCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR TCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCTCTCCTGGACAGGCATaGGCATGCTGCCAAGACTGG +
Preference number: 4 (lower is better)
Translates to: KECKGRRKTKATGEKTACSPGQA*ACCQDW
Trigger: CCAGTCTTGGCAGCATGCTCATGCCTGTCCAGGAGA...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGTGGCATCGTGCTTCATaGCACTGTGCACGCCAACTG +
Preference number: 4 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWWHRAS*HCARQL
Trigger: CAGTTGGCGTGCACAGTGTCATGAAGCACGATGCCA...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTAGCGAGGGGCCCGGATaGAGAGTCTGCATCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLSEGPG*RVCIFC
Trigger: GCAGAAGATGCAGACTCTTCATCCGGGCCCCTCGCT...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTACTGGCACTTTCTTCTaGCGTTTCCCGCCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: PARRHGNNVSDLHTETPPTGTFF*RFPPLG
Trigger: GCCCAAGGGCGGGAAACGGCAGAAGAAAGTGCCAGT...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp ATGACAACTCTGTTTGCCCCCGTCAGGTTGACACCTAAGCCGCCCACCCGCGTGTCCATGATGGCATCGTaGTTCATGACACTGTGCACG +
Preference number: 4 (lower is better)
Translates to: MTTLFAPVRLTPKPPTRVSMMAS*FMTLCT
Trigger: CGTGCACAGTGTCATGAAGCACGATGCCATCATGGA...CACGCGGGTGGGCGGCTTAGGTGTCAACCTGACGGGGGCAAACAGAGTTGTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR GCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGAGGGCAGAAGCTTCCTaGAGGTGCCCGCTTTCACTT +
Preference number: 4 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWRAEAS*RCPLSL
Trigger: AAGTGAAAGCGGGCACCTGCAGGAAGCTTCTGCCCT...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCGCAGTATCTCCCTGGTaGTGGCCTGGCCATCAGTGT +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVAVSPW*WPGHQC
Trigger: ACACTGATGGCCAGGCCAGCACCAGGGAGATACTGC...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp GAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTGCTCTATTGTCAGCTCGACGGGCCGTaGCGCCTGCGCCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: EVTYRGAQNSKQTLLLYCQLDGP*RLRPQL
Trigger: GAGCTGAGGGCGCAGGCGCCACGGCCCGTCGAGCTG...ACAATAGAGCAGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR CCA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTGCACGGCTGGCCTCATaGATGGCATTGTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLARLAS*MALSTC
Trigger: GCAGGTGGACAATGCCATCCATGAGGCCAGCCGTGC...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp GCTTCAGCTCATAGTCAGTACCATCTCCAGACAGGTCCGCCTCTGCCCCCTCCACCAAAAGGTGTCATCTaGCCAGTGCGGATGAGCTCT +
Preference number: 4 (lower is better)
Translates to: ASAHSQYHLQTGPPLPPPPKGVI*PVRMSS
Trigger: AGAGCTCATCCGCACTGGCCAGATGACACCTTTTGG...TGGAGGGGGCAGAGGCGGACCTGTCTGGAGATGGTACTGACTATGAGCTGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR CCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGCTGCGTGTCCGTGCTTaGGTTCCAGTCTGGGTCATA +
Preference number: 4 (lower is better)
Translates to: ECKGRRKTKATGEKTACQLRVRA*VPVWVI
Trigger: TATGACCCAGACTGGAACCCAAGCACGGACACGCAG...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp CCCTGTGGCCAGTCCAGGTGGGAACACCAGACACTGCTCCCAGACACCGCTGACGAACTTCTTGCGTTTTaGAACATCATGGTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PCGQSRWEHQTLLPDTADELLAF*NIMVCS
Trigger: GGAGCAGACCATGATGTTCCAAAACGCAAGAAGTTC...GTCAGCGGTGTCTGGGAGCAGTGTCTGGTGTTCCCACCTGGACTGGCCACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR CCA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTCCTGGGCCACTCGGTTaGCTTCTGCCTCCACCAGTA +
Preference number: 4 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLPGPLG*LLPPPV
Trigger: TACTGGTGGAGGCAGAAGCCAACCGAGTGGCCCAGG...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCGCTTTCAGGGCATCCTaGGCCACTCGGTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVAFRAS*ATRLAS
Trigger: AGAAGCCAACCGAGTGGCCCAGGATGCCCTGAAAGC...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTGGTCATCGTGTTCTGTaGTGGGCAGCAGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LASQPARKGNVKESAYPAGHRVL*WAAGQK
Trigger: CTTCTGCCCTGCTGCCCACCACAGAACACGATGACC...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR CAA 72 bp AATGGTGCCCGCAGTCAGGAGCCTGTACACAGTCACTaGCTTCTTCTGGCCTATTCTCCATGCTCGCTCCCG +
Preference number: 4 (lower is better)
Translates to: NGARSQEPVHSH*LLLAYSPCSLP
Trigger: CGGGAGCGAGCATGGAGAATAGGCCAGAAGAAGCAAGTGACTGTGTACAGGCTCCTGACTGCGGGCACCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR TCA 90 bp CTCCCTGTTCCAGCACGTCCTGGTCATAGACGTCCACACCCAAACCCTGCAGCTCTCCTGAGTTTGACTTaGGTGGGGGATTCCCTCATT +
Preference number: 4 (lower is better)
Translates to: LPVPARPGHRRPHPNPAALLSLT*VGDSLI
Trigger: AATGAGGGAATCCCCCACTCAAGTCAAACTCAGGAG...AGCTGCAGGGTTTGGGTGTGGACGTCTATGACCAGGACGTGCTGGAACAGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR TCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCTCTACTGCCTGGATCTaGTGTCGGTCGATGTGCAGC +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVSTAWI*CRSMCS
Trigger: GCTGCACATCGACCGACATCAGATCCAGGCAGTAGA...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTGTGAGCCAGACAGAATaGTCCGATGAGGGGTGCGAA +
Preference number: 4 (lower is better)
Translates to: PARRHGNNVSDLHTETPPVSQTE*SDEGCE
Trigger: TTCGCACCCCTCATCGGATCATTCTGTCTGGCTCAC...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp TGGGCAGCAGGGCAGAAGCTTCCTGCAGGTGCCCGCTTTCACTTTCTAAACGCTAGTCTGGGTCATAGATaGCAACTCTGTTTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: WAAGQKLPAGARFHFLNASLGHR*QLCLPP
Trigger: CGGGGGCAAACAGAGTTGTCATCTATGACCCAGACT...AGCGTTTAGAAAGTGAAAGCGGGCACCTGCAGGAAGCTTCTGCCCTGCTGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR TCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCAGATCTCCACACTaGGACACCACCTTCCCAAGA +
Preference number: 4 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWVRSPH*DTTFPR
Trigger: TCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGAC...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp CCTGTGAGGTACCATACCTCTGGACAGGGAGCTGAGGGAGACGGAGCTCTGTTTGTCAGATCTCCACACTaGGACACCACCTTCCCAAGA +
Preference number: 4 (lower is better)
Translates to: PVRYHTSGQGAEGDGALFVRSPH*DTTFPR
Trigger: TCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGAC...AAACAGAGCTCCGTCTCCCTCAGCTCCCTGTCCAGAGGTATGGTACCTCACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR TCA 90 bp AACACCAGACACTGCTCCCAGACACCGCTGACGAGAGAGCCTCAGTGCTTTCAGGAAGTAGTCTTAAGCTaGGCAGCCAGACGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: NTRHCSQTPLTREPQCFQEVVLS*AARRPG
Trigger: ACCTGGACGTCTGGCTGCTCAGCTTAAGACTACTTC...CTGAAAGCACTGAGGCTCTCTCGTCAGCGGTGTCTGGGAGCAGTGTCTGGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR GCA 90 bp ATGACAACTCTGTTTGCCCCCGTCAGGTTGACACCTAAGCCGCCCACCCGCGTGTTCAGTGCTCTGGGATaGATCAGGACTAGTCAGAGT +
Preference number: 4 (lower is better)
Translates to: MTTLFAPVRLTPKPPTRVFSALG*IRTSQS
Trigger: ACTCTGACTAGTCCTGATGCATCCCAGAGCACTGAA...CACGCGGGTGGGCGGCTTAGGTGTCAACCTGACGGGGGCAAACAGAGTTGTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR CCA 90 bp AGAAGACAGCCTGCCAGCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCACCAAAAGGTGTCATCTaGCCAGTGCGGATGAGCTCT +
Preference number: 4 (lower is better)
Translates to: RRQPASLQTREAWSGVTSPKGVI*PVRMSS
Trigger: AGAGCTCATCCGCACTGGCCAGATGACACCTTTTGG...TGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp TGGGCAGCAGGGCAGAAGCTTCCTGCAGGTGCCCGCTTTCACTTTCTAAACGCTAGCCGCCCACCCGCGTaGTCAGAAGAAACACAAATA +
Preference number: 4 (lower is better)
Translates to: WAAGQKLPAGARFHFLNASRPPA*SEETQI
Trigger: TATTTGTGTTTCTTCTGACCACGCGGGTGGGCGGCT...AGCGTTTAGAAAGTGAAAGCGGGCACCTGCAGGAAGCTTCTGCCCTGCTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR CCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTCTGCGTGTCCGTGCTTaGGTTCCAGTCTGGGTCATA +
Preference number: 4 (lower is better)
Translates to: LASQPARKGNVKESAYPALRVRA*VPVWVI
Trigger: TATGACCCAGACTGGAACCCAAGCACGGACACGCAG...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCTGCGTGTCCGTGCTTaGGTTCCAGTCTGGGTCATA +
Preference number: 4 (lower is better)
Translates to: KECKGRRKTKATGEKTACLRVRA*VPVWVI
Trigger: TATGACCCAGACTGGAACCCAAGCACGGACACGCAG...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTCCAGAAATCCCCCTGTaGCCAGTCCAGGTGGGAACA +
Preference number: 4 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLPEIPL*PVQVGT
Trigger: TGTTCCCACCTGGACTGGCCACAGGGGGATTTCTGG...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGCAGACAAGAGAGGCCTaGAGTGGTGTCACTTCATGG +
Preference number: 4 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWQTREA*SGVTSW
Trigger: CCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTG...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp TGCCACTTGAAGCTGGAGGGGATAAGAAATGCTGGCATCTTGCCCCTCCCTGTGCTGCACCCACTGAAATaGGAGGGAGGGAGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: CHLKLEGIRNAGILPLPVLHPLK*EGGSEC
Trigger: ACACTCACTCCCTCCCTCCCATTTCAGTGGGTGCAG...CACAGGGAGGGGCAAGATGCCAGCATTTCTTATCCCCTCCAGCTTCAAGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR TCA 90 bp CTCCCTGTTCCAGCACGTCCTGGTCATAGACGTCCACACCCAAACCCTGCAGCTTCCTCCAGACTGGCGTaGTCTAGTTCAATTTTCACC +
Preference number: 4 (lower is better)
Translates to: LPVPARPGHRRPHPNPAASSRLA*SSSIFT
Trigger: GGTGAAAATTGAACTAGATCACGCCAGTCTGGAGGA...AGCTGCAGGGTTTGGGTGTGGACGTCTATGACCAGGACGTGCTGGAACAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR TCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGTTGCCCCCGTCAGGTTaGCACCTAAGCCGCCCACCC +
Preference number: 4 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRLPPSG*HLSRPP
Trigger: GGGTGGGCGGCTTAGGTGTCAACCTGACGGGGGCAA...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCAGTCTGGGTCATAGATaGCAACTCTGTTTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: KECKGRRKTKATGEKTACSLGHR*QLCLPP
Trigger: CGGGGGCAAACAGAGTTGTCATCTATGACCCAGACT...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCGTCAGATCTCCACACTaGGACACCACCTTCCCAAGA +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVVRSPH*DTTFPR
Trigger: TCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGAC...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGCACCAAATGACAGCGTaGGGAGTGTGGTTGGTAGAA +
Preference number: 4 (lower is better)
Translates to: ECKGRRKTKATGEKTACQHQMTA*GVWLVE
Trigger: TTCTACCAACCACACTCCTCACGCTGTCATTTGGTG...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGATGCAAAGCACCAAATaGCAGCGTGAGGAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: ECKGRRKTKATGEKTACQMQSTK*QREECG
Trigger: ACCACACTCCTCACGCTGTCATTTGGTGCTTTGCAT...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp CTCCCTGTTCCAGCACGTCCTGGTCATAGACGTCCACACCCAAACCCTGCAGCTTTCAATTTTCACCTCTaGTCCTCCAAGGATGGCCTG +
Preference number: 4 (lower is better)
Translates to: LPVPARPGHRRPHPNPAAFNFHL*SSKDGL
Trigger: CAGGCCATCCTTGGAGGAGCAGAGGTGAAAATTGAA...AGCTGCAGGGTTTGGGTGTGGACGTCTATGACCAGGACGTGCTGGAACAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR GCA 90 bp AGAAGACAGCCTGCCAGCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCAATGGGGACGGAGAACTaGTCCATAAACACAGGCAAC +
Preference number: 4 (lower is better)
Translates to: RRQPASLQTREAWSGVTSMGTEN*SINTGN
Trigger: GTTGCCTGTGTTTATGGAGCAGTTCTCCGTCCCCAT...TGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACGACAGCCTGCCAGCCTaGAGACAAGAGAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHDSLPA*RQERPG
Trigger: TCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTC...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGCTGCTCCTCCAAGGATaGCCTGGAGATGCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: ECKGRRKTKATGEKTACQLLLQG*PGDAFV
Trigger: AACAAAAGCATCTCCAGGCCATCCTTGGAGGAGCAG...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp CTGAGGGATCTGGGTACCAAAAGGTGTCATCTGGCCAGTGCGGATGAGCTCTTCAGGTCTCCTTGCCTTTaGCAATCCCACTTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: LRDLGTKRCHLASADELFRSPCL*QSHFPL
Trigger: CAGGGGAAAGTGGGATTGCCAAAGGCAAGGAGACCT...GAAGAGCTCATCCGCACTGGCCAGATGACACCTTTTGGTACCCAGATCCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR CCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTAGCCGCCCACCCGCGTaGTCAGAAGAAACACAAATA +
Preference number: 4 (lower is better)
Translates to: LASQPARKGNVKESAYPASRPPA*SEETQI
Trigger: TATTTGTGTTTCTTCTGACCACGCGGGTGGGCGGCT...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp TGCCACTTGAAGCTGGAGGGGATAAGAAATGCTGGCATCTTGCCCCTCCCTGTGCAGACAAGAGAGGCCTaGAGTGGTGTCACTTCATGG +
Preference number: 4 (lower is better)
Translates to: CHLKLEGIRNAGILPLPVQTREA*SGVTSW
Trigger: CCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTG...CACAGGGAGGGGCAAGATGCCAGCATTTCTTATCCCCTCCAGCTTCAAGTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR CCA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTCAAGACGAAGGCAACTaGAGAGAAGACAGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: PARRHGNNVSDLHTETPPQDEGN*REDSLP
Trigger: TGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTG...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACGGAACAGGTGCAAGATaGTGTGGGGGTGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHGTGAR*CGGGEA
Trigger: TGCCTCCCCACCCCCACACCATCTTGCACCTGTTCC...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp TGGGCAGCAGGGCAGAAGCTTCCTGCAGGTGCCCGCTTTCACTTTCTAAACGCTAGAGCAGTTCAAGACTaGCAGGCCAACTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: WAAGQKLPAGARFHFLNARAVQD*QANFSF
Trigger: GAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCT...AGCGTTTAGAAAGTGAAAGCGGGCACCTGCAGGAAGCTTCTGCCCTGCTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR CAA 72 bp CACTTGAAGCTGGAGGGGATAAGAAATGCTGGCATCTaGCCCCTCCCTGTGAGGTACCATACCTCTGGACAG +
Preference number: 4 (lower is better)
Translates to: HLKLEGIRNAGI*PLPVRYHTSGQ
Trigger: CTGTCCAGAGGTATGGTACCTCACAGGGAGGGGCAAGATGCCAGCATTTCTTATCCCCTCCAGCTTCAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR TCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCTCCTGAGTTTGACTTaGGTGGGGGATTCCCTCATT +
Preference number: 4 (lower is better)
Translates to: KECKGRRKTKATGEKTACLLSLT*VGDSLI
Trigger: AATGAGGGAATCCCCCACTCAAGTCAAACTCAGGAG...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCTTGAACCACGAGTCCTaGTCTTGCTGTAGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVLNHES*SCCSSD
Trigger: GTCTGAGCTACAGCAAGATCAGGACTCGTGGTTCAA...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355832.10
CDS-3UTR TCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGGTTTGCAAGCAAGGGTaGCAGCAGCATTTGGATTTC +
Preference number: 4 (lower is better)
Translates to: ECKGRRKTKATGEKTACQVCKQG*QQHLDF
Trigger: GAAATCCAAATGCTGCTGTCACCCTTGCTTGCAAAC...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp CCTGTGAGGTACCATACCTCTGGACAGGGAGCTGAGGGAGACGGAGCTCTGTTTGTTATTTTGCATCGGTaGGCCAGACAGAATGATCCG +
Preference number: 4 (lower is better)
Translates to: PVRYHTSGQGAEGDGALFVILHR*ARQNDP
Trigger: CGGATCATTCTGTCTGGCTCACCGATGCAAAATAAC...AAACAGAGCTCCGTCTCCCTCAGCTCCCTGTCCAGAGGTATGGTACCTCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR TCA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTAGTCTGGGTCATAGATaGCAACTCTGTTTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLSLGHR*QLCLPP
Trigger: CGGGGGCAAACAGAGTTGTCATCTATGACCCAGACT...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGTTCCCTCCTTTTTCATaGTGCCATCCTGGCACTTCT +
Preference number: 4 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWFPPFS*CHPGTS
Trigger: AGAAGTGCCAGGATGGCATCATGAAAAAGGAGGGAA...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AACACCAGACACTGCTCCCAGACACCGCTGACGAGAGAGCCTCAGTGCTTTCAGATCACTTCCATCTCTTaGGATGCCAGGTCACTACTG +
Preference number: 4 (lower is better)
Translates to: NTRHCSQTPLTREPQCFQITSIS*DARSLL
Trigger: CAGTAGTGACCTGGCATCTCAAGAGATGGAAGTGAT...CTGAAAGCACTGAGGCTCTCTCGTCAGCGGTGTCTGGGAGCAGTGTCTGGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR TCA 90 bp ATGACAACTCTGTTTGCCCCCGTCAGGTTGACACCTAAGCCGCCCACCCGCGTGAAAGGAACTTGCCCATaGATGGCAAAACACAATGCA +
Preference number: 4 (lower is better)
Translates to: MTTLFAPVRLTPKPPTRVKGTCP*MAKHNA
Trigger: TGCATTGTGTTTTGCCATTCATGGGCAAGTTCCTTT...CACGCGGGTGGGCGGCTTAGGTGTCAACCTGACGGGGGCAAACAGAGTTGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR GCA 90 bp CTCCCTGTTCCAGCACGTCCTGGTCATAGACGTCCACACCCAAACCCTGCAGCTAGGATGGCCTGGAGATaGTTTTGTTTTGCAGTGATC +
Preference number: 4 (lower is better)
Translates to: LPVPARPGHRRPHPNPAARMAWR*FCFAVI
Trigger: GATCACTGCAAAACAAAAGCATCTCCAGGCCATCCT...AGCTGCAGGGTTTGGGTGTGGACGTCTATGACCAGGACGTGCTGGAACAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR GCA 90 bp CCTGTGAGGTACCATACCTCTGGACAGGGAGCTGAGGGAGACGGAGCTCTGTTTTTCAATTTTCACCTCTaGTCCTCCAAGGATGGCCTG +
Preference number: 4 (lower is better)
Translates to: PVRYHTSGQGAEGDGALFFNFHL*SSKDGL
Trigger: CAGGCCATCCTTGGAGGAGCAGAGGTGAAAATTGAA...AAACAGAGCTCCGTCTCCCTCAGCTCCCTGTCCAGAGGTATGGTACCTCACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR GCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCTCCCAAGGTCTCCTTaGCTTTGGCAATCCCACTTT +
Preference number: 4 (lower is better)
Translates to: KECKGRRKTKATGEKTACLPRSP*LWQSHF
Trigger: AAAGTGGGATTGCCAAAGGCAAGGAGACCTTGGGAG...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp CTGAGGGATCTGGGTACCAAAAGGTGTCATCTGGCCAGTGCGGATGAGCTCTTCCTCCCAAGGTCTCCTTaGCTTTGGCAATCCCACTTT +
Preference number: 4 (lower is better)
Translates to: LRDLGTKRCHLASADELFLPRSP*LWQSHF
Trigger: AAAGTGGGATTGCCAAAGGCAAGGAGACCTTGGGAG...GAAGAGCTCATCCGCACTGGCCAGATGACACCTTTTGGTACCCAGATCCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR GCA 90 bp AGAAGACAGCCTGCCAGCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATCTCGGAGGTTATTTTaGATCGGTGAGCCAGACAGA +
Preference number: 4 (lower is better)
Translates to: RRQPASLQTREAWSGVTSSRRLF*IGEPDR
Trigger: TCTGTCTGGCTCACCGATGCAAAATAACCTCCGAGA...TGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCATGGGGACGGAGAACTaGTCCATAAACACAGGCAAC +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVMGTEN*SINTGN
Trigger: GTTGCCTGTGTTTATGGAGCAGTTCTCCGTCCCCAT...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGGGGCCTGCGTGTCCGTaGTTGGGTTCCAGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRGPACP*LGSSLG
Trigger: ACCCAGACTGGAACCCAAGCACGGACACGCAGGCCC...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCAGGGCCTGCGTGTCCGTaGTTGGGTTCCAGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSGPACP*LGSSLG
Trigger: ACCCAGACTGGAACCCAAGCACGGACACGCAGGCCC...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGCTGGCCTATTCTCCATaGTCGCTCCCGGGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRLAYSP*SLPGLR
Trigger: ACGCAGGCCCGGGAGCGAGCATGGAGAATAGGCCAG...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGGGGAACACCAGACACTaGTCCCAGACACCGCTGACG +
Preference number: 4 (lower is better)
Translates to: KGECQGECIPCFFKGPIGGNTRH*SQTPLT
Trigger: CGTCAGCGGTGTCTGGGAGCAGTGTCTGGTGTTCCC...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AGAAGACAGCCTGCCAGCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCAGAAGCTTCCTGCAGGTaGCCGCTTTCACTTTCTAAA +
Preference number: 4 (lower is better)
Translates to: RRQPASLQTREAWSGVTSEASCR*PLSLSK
Trigger: TTTAGAAAGTGAAAGCGGGCACCTGCAGGAAGCTTC...TGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACGCAGTATCTCCCTGGTaGTGGCCTGGCCATCAGTGT +
Preference number: 4 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHAVSPW*WPGHQC
Trigger: ACACTGATGGCCAGGCCAGCACCAGGGAGATACTGC...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGTTGGATTCAAACTCCTaGAGTATCTCCCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWLDSNS*SISLVL
Trigger: CAGCACCAGGGAGATACTGCAGGAGTTTGAATCCAA...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGTTGGATTCAAACTCCTaGAGTATCTCCCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: ECKGRRKTKATGEKTACQLDSNS*SISLVL
Trigger: CAGCACCAGGGAGATACTGCAGGAGTTTGAATCCAA...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp CCTGTGAGGTACCATACCTCTGGACAGGGAGCTGAGGGAGACGGAGCTCTGTTTCATGAATTTAGCTCTTaGCACTTGAAGCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PVRYHTSGQGAEGDGALFHEFSS*HLKLEG
Trigger: CCCCTCCAGCTTCAAGTGGCAAGAGCTAAATTCATG...AAACAGAGCTCCGTCTCCCTCAGCTCCCTGTCCAGAGGTATGGTACCTCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR CCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGTGCAGCTCAAGGGCCTaGGCGCTAGGCTCTACTGCC +
Preference number: 4 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRCSSRA*ALGSTA
Trigger: GGCAGTAGAGCCTAGCGCCCAGGCCCTTGAGCTGCA...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGTCCACGTCAACGAGCTaGGAGGCACGGCTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRSTSTS*EARLAS
Trigger: TGAGGCCAGCCGTGCCTCCCAGCTCGTTGACGTGGA...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp GGGAAATACTCAGACTCTTCACCCTCAGAGTCTCCCTCTGCCTCTGGCCTCATGCTGCTCCTCCAAGGATaGCCTGGAGATGCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: GKYSDSSPSESPSASGLMLLLQG*PGDAFV
Trigger: AACAAAAGCATCTCCAGGCCATCCTTGGAGGAGCAG...CATGAGGCCAGAGGCAGAGGGAGACTCTGAGGGTGAAGAGTCTGAGTATTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR CCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCTGCTCCTCCAAGGATaGCCTGGAGATGCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: KECKGRRKTKATGEKTACLLLQG*PGDAFV
Trigger: AACAAAAGCATCTCCAGGCCATCCTTGGAGGAGCAG...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp ATAATCTTCATCTCCATCATCTCGGTATCTTCCCACTTTCCGACCTCCTCCTCCGCATGCTGCCAAGACTaGATGGCCCCGGCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: IIFISIISVSSHFPTSSSACCQD*MAPALH
Trigger: ATGCAGAGCCGGGGCCATCCAGTCTTGGCAGCATGC...GGAGGAGGAGGTCGGAAAGTGGGAAGATACCGAGATGATGGAGATGAAGATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR CCA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTAGGTCTCCTTGCCTTTaGCAATCCCACTTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLRSPCL*QSHFPL
Trigger: CAGGGGAAAGTGGGATTGCCAAAGGCAAGGAGACCT...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp CTCCCTGTTCCAGCACGTCCTGGTCATAGACGTCCACACCCAAACCCTGCAGCTATCAATCTCCTGCACTaGCACTTTCTTCTGCCGTTT +
Preference number: 4 (lower is better)
Translates to: LPVPARPGHRRPHPNPAAINLLH*HFLLPF
Trigger: AAACGGCAGAAGAAAGTGCCAGTGCAGGAGATTGAT...AGCTGCAGGGTTTGGGTGTGGACGTCTATGACCAGGACGTGCTGGAACAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR CCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCAGATCTTTTCTTCAATaGTGCCCGCAGTCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVRSFLQ*CPQSGA
Trigger: GGCTCCTGACTGCGGGCACCATTGAAGAAAAGATCT...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp AGAAGACAGCCTGCCAGCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCACTTGTTTCAGTGCTCTaGGATGCATCAGGACTAGTC +
Preference number: 4 (lower is better)
Translates to: RRQPASLQTREAWSGVTSLVSVL*DASGLV
Trigger: GACTAGTCCTGATGCATCCCAGAGCACTGAAACAAG...TGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGCGTTTTGGAACATCATaGTCTGCTCCAAAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: ECKGRRKTKATGEKTACQRFGTS*SAPKAG
Trigger: ACCAGCCTTTGGAGCAGACCATGATGTTCCAAAACG...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTCCATCAGTGTGGGCCTaGAAAGCGATGAAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: LASQPARKGNVKESAYPAPSVWA*KAMKFL
Trigger: GAGAAACTTCATCGCTTTCCAGGCCCACACTGATGG...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGCCTGCAGTATCTCCCTaGTGCTGGCCTGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: KGECQGECIPCFFKGPIGPAVSP*CWPGHQ
Trigger: CTGATGGCCAGGCCAGCACCAGGGAGATACTGCAGG...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGAAGAGAGGCCTGGAGTaGTGTCACTTCATGGTAACA +
Preference number: 4 (lower is better)
Translates to: ECKGRRKTKATGEKTACQKRGLE*CHFMVT
Trigger: TGTTACCATGAAGTGACACCACTCCAGGCCTCTCTT...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTAGAGCAGTTCAAGACTaGCAGGCCAACTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LASQPARKGNVKESAYPARAVQD*QANFSF
Trigger: GAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCT...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp ATAATCTTCATCTCCATCATCTCGGTATCTTCCCACTTTCCGACCTCCTCCTCCCTCTGGCCTCATGTCTaGCTCCCAAGGTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: IIFISIISVSSHFPTSSSLWPHV*LPRSPC
Trigger: GCAAGGAGACCTTGGGAGTCAGACATGAGGCCAGAG...GGAGGAGGAGGTCGGAAAGTGGGAAGATACCGAGATGATGGAGATGAAGATTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR TCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCAGCATCTGCCTTGACTaGGAAAACAGCAATACTCGC +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVSICLD*ENSNTR
Trigger: GCGAGTATTGCTGTTTTCTCAGTCAAGGCAGATGCT...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTGTCCAGCATCTGCCTTaGCTGAGAAAACAGCAATAC +
Preference number: 4 (lower is better)
Translates to: LASQPARKGNVKESAYPAVQHLP*LRKQQY
Trigger: GTATTGCTGTTTTCTCAGTCAAGGCAGATGCTGGAC...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp TGGGCAGCAGGGCAGAAGCTTCCTGCAGGTGCCCGCTTTCACTTTCTAAACGCTAATCAGTGGCTGTCTTaGAGCTATTGTAGTGGTACC +
Preference number: 4 (lower is better)
Translates to: WAAGQKLPAGARFHFLNANQWLS*SYCSGT
Trigger: GGTACCACTACAATAGCTTCAAGACAGCCACTGATT...AGCGTTTAGAAAGTGAAAGCGGGCACCTGCAGGAAGCTTCTGCCCTGCTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR TCA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTTGGCATTTGGGTGTCTaGACATCTGATCCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: PARRHGNNVSDLHTETPPWHLGV*TSDPVP
Trigger: AGGAACTGGATCAGATGTTCAGACACCCAAATGCCA...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AGAAGACAGCCTGCCAGCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCAGCTCCAAAGGCTGGTTaGATCCTTCTTTTTAGATGG +
Preference number: 4 (lower is better)
Translates to: RRQPASLQTREAWSGVTSAPKAG*ILLFRW
Trigger: CCATCTAAAAAGAAGGATTCAACCAGCCTTTGGAGC...TGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCCAAAAAGCTTCTGTTTaGGCCTGGCTGGGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVQKASV*AWLGLS
Trigger: AGAAAGACCCAGCCAGGCTCAAACAGAAGCTTTTTG...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGGCTCCCAGACACCGCTaGCGAGAGAGCCTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRAPRHR*RESLSA
Trigger: AGCACTGAGGCTCTCTCGTCAGCGGTGTCTGGGAGC...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTATCACTTCCATCTCTTaGGATGCCAGGTCACTACTG +
Preference number: 4 (lower is better)
Translates to: LASQPARKGNVKESAYPAITSIS*DARSLL
Trigger: CAGTAGTGACCTGGCATCTCAAGAGATGGAAGTGAT...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTATGCAAAGCACCAAATaGCAGCGTGAGGAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLMQSTK*QREECG
Trigger: ACCACACTCCTCACGCTGTCATTTGGTGCTTTGCAT...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp ATAATCTTCATCTCCATCATCTCGGTATCTTCCCACTTTCCGACCTCCTCCTCCGGCGCTAGGCTCTACTaGCTGGATCTGATGTCGGTC +
Preference number: 4 (lower is better)
Translates to: IIFISIISVSSHFPTSSSGARLY*LDLMSV
Trigger: GACCGACATCAGATCCAGGCAGTAGAGCCTAGCGCC...GGAGGAGGAGGTCGGAAAGTGGGAAGATACCGAGATGATGGAGATGAAGATTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR GCA 90 bp GAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTGCTCTATTGTTCCACACCCAAACCCTaGAGCTCAAGGGCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: EVTYRGAQNSKQTLLLYCSTPKP*SSRAWA
Trigger: CGCCCAGGCCCTTGAGCTGCAGGGTTTGGGTGTGGA...ACAATAGAGCAGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR GCA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGCCTGCCTGCTGGCAGTaGAATTCCCACAGCCACCTA +
Preference number: 4 (lower is better)
Translates to: KGECQGECIPCFFKGPIGPACWQ*NSHSHL
Trigger: TAGGTGGCTGTGGGAATTGCACTGCCAGCAGGCAGG...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355832.10
CDS-3UTR GCA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGCTGGCCTATTCTCCATaGTCGCTCCCGGGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRLAYSP*SLPGLR
Trigger: ACGCAGGCCCGGGAGCGAGCATGGAGAATAGGCCAG...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTTCAGTGCTCTGGGATaGATCAGGACTAGTCAGAGT +
Preference number: 4 (lower is better)
Translates to: LASQPARKGNVKESAYPAFSALG*IRTSQS
Trigger: ACTCTGACTAGTCCTGATGCATCCCAGAGCACTGAA...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp TGCCACTTGAAGCTGGAGGGGATAAGAAATGCTGGCATCTTGCCCCTCCCTGTGTTGCACTTGTTTCAGTaGTCTGGGATGCATCAGGAC +
Preference number: 4 (lower is better)
Translates to: CHLKLEGIRNAGILPLPVLHLFQ*SGMHQD
Trigger: GTCCTGATGCATCCCAGAGCACTGAAACAAGTGCAA...CACAGGGAGGGGCAAGATGCCAGCATTTCTTATCCCCTCCAGCTTCAAGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR GCA 90 bp ATGACAACTCTGTTTGCCCCCGTCAGGTTGACACCTAAGCCGCCCACCCGCGTGGAGTTCTTAGGCTTTTaGTTTGGTCTCAGATGTTTC +
Preference number: 4 (lower is better)
Translates to: MTTLFAPVRLTPKPPTRVEFLGF*FGLRCF
Trigger: GAAACATCTGAGACCAAAGCAAAAGCCTAAGAACTC...CACGCGGGTGGGCGGCTTAGGTGTCAACCTGACGGGGGCAAACAGAGTTGTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR GCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGAAAAAGATGCCCTCTaGTTAAAGGAAAGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWEKDAL*LKESQG
Trigger: ACCCTGGCTTTCCTTTAAGCAGAGGGCATCTTTTTC...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp TTTGTCGGTGGTAGATCTTTTCTTCAATGGTGCCCGCAGTCAGGAGCCTGTACAGGAGAGAAGACAGCCTaGCAGCCTGCAGACAAGAGA +
Preference number: 4 (lower is better)
Translates to: FVGGRSFLQWCPQSGACTGEKTA*QPADKR
Trigger: TCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCTCTCC...TGTACAGGCTCCTGACTGCGGGCACCATTGAAGAAAAGATCTACCACCGACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR GCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGGGAGAGTGCATACCCTaGTTCTTTAAAGGGCCAATT +
Preference number: 4 (lower is better)
Translates to: ECKGRRKTKATGEKTACQGECIP*FFKGPI
Trigger: AATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCC...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp GCATTCTGTAGTATGATAGGTTTTCTATTTCAGACAGCTAAGAATGCCTTACAGCGCCGCCAGCCGCCTTaGAACCCAGCTCGACGGGCC +
Preference number: 4 (lower is better)
Translates to: AFCSMIGFLFQTAKNALQRRQPP*NPARRA
Trigger: GGCCCGTCGAGCTGGGTTCCAAGGCGGCTGGCGGCG...CTGTAAGGCATTCTTAGCTGTCTGAAATAGAAAACCTATCATACTACAGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR CCA 90 bp TTGGGAAAAAGTCATCATCAATCTCCTGCACTGGCACTTTCTTCTGCCGTTTCCGCACGGCTGGCCTCATaGATGGCATTGTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: LGKSHHQSPALALSSAVSARLAS*MALSTC
Trigger: GCAGGTGGACAATGCCATCCATGAGGCCAGCCGTGC...GGAAACGGCAGAAGAAAGTGCCAGTGCAGGAGATTGATGATGACTTTTTCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR CCA 90 bp GAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTGCTCTATTGTTCCACGTCAACGAGCTaGGAGGCACGGCTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: EVTYRGAQNSKQTLLLYCSTSTS*EARLAS
Trigger: TGAGGCCAGCCGTGCCTCCCAGCTCGTTGACGTGGA...ACAATAGAGCAGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR CCA 90 bp ATAATCTTCATCTCCATCATCTCGGTATCTTCCCACTTTCCGACCTCCTCCTCCTCCCAGGCAGTCTCCTaGACAGGCATGAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: IIFISIISVSSHFPTSSSSQAVS*TGMSML
Trigger: CAGCATGCTCATGCCTGTCCAGGAGACTGCCTGGGA...GGAGGAGGAGGTCGGAAAGTGGGAAGATACCGAGATGATGGAGATGAAGATTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR CCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCCTTCCTCCTCCTCTGTaGGGAAATACTCAGACTCTT +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVLPPPL*GNTQTL
Trigger: AAGAGTCTGAGTATTTCCCCACAGAGGAGGAGGAAG...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGGCCGTTTCCCGCCCTTaGGCAGAGGCTTCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRAVSRP*AEASAH
Trigger: ATGAGCTGAAGCCTCTGCCCAAGGGCGGGAAACGGC...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGATCAATCTCCTGCACTaGCACTTTCTTCTGCCGTTT +
Preference number: 4 (lower is better)
Translates to: ECKGRRKTKATGEKTACQINLLH*HFLLPF
Trigger: AAACGGCAGAAGAAAGTGCCAGTGCAGGAGATTGAT...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTCTTGTTTCAGTGCTCTaGGATGCATCAGGACTAGTC +
Preference number: 4 (lower is better)
Translates to: LASQPARKGNVKESAYPALVSVL*DASGLV
Trigger: GACTAGTCCTGATGCATCCCAGAGCACTGAAACAAG...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGGAACTTCTTGCGTTTTaGAACATCATGGTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ECKGRRKTKATGEKTACQELLAF*NIMVCS
Trigger: GGAGCAGACCATGATGTTCCAAAACGCAAGAAGTTC...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp TGCCACTTGAAGCTGGAGGGGATAAGAAATGCTGGCATCTTGCCCCTCCCTGTGCACCAGTACATAATCTaGGCTGGCTCCATCCATGAT +
Preference number: 4 (lower is better)
Translates to: CHLKLEGIRNAGILPLPVHQYII*AGSIHD
Trigger: ATCATGGATGGAGCCAGCCCAGATTATGTACTGGTG...CACAGGGAGGGGCAAGATGCCAGCATTTCTTATCCCCTCCAGCTTCAAGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR CCA 90 bp AGAAGACAGCCTGCCAGCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATTCATGATGCCATCCTaGCACTTCTCTGTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: RRQPASLQTREAWSGVTSFMMPS*HFSVGD
Trigger: ATCTCCAACAGAGAAGTGCCAGGATGGCATCATGAA...TGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp ATGACAACTCTGTTTGCCCCCGTCAGGTTGACACCTAAGCCGCCCACCCGCGTGTCTGGCAGAATCAGGTaGTTTCTAGCTCTCATTTTA +
Preference number: 4 (lower is better)
Translates to: MTTLFAPVRLTPKPPTRVSGRIR*FLALIL
Trigger: TAAAATGAGAGCTAGAAACCACCTGATTCTGCCAGA...CACGCGGGTGGGCGGCTTAGGTGTCAACCTGACGGGGGCAAACAGAGTTGTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR CCA 90 bp GGGAAATACTCAGACTCTTCACCCTCAGAGTCTCCCTCTGCCTCTGGCCTCATGGTGTTCGAGGCATCTTaGGACTTAACCGCTGCTTAT +
Preference number: 4 (lower is better)
Translates to: GKYSDSSPSESPSASGLMVFEAS*DLTAAY
Trigger: ATAAGCAGCGGTTAAGTCCCAAGATGCCTCGAACAC...CATGAGGCCAGAGGCAGAGGGAGACTCTGAGGGTGAAGAGTCTGAGTATTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR TCA 90 bp AAACTTCAAGGAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTTCTCCTCGGAGCTGCTaGTGCGCACCCCACAGCAGA +
Preference number: 4 (lower is better)
Translates to: KLQGGHLPWCSKFKTDLTSPRSC*CAPHSR
Trigger: TCTGCTGTGGGGTGCGCATCAGCAGCTCCGAGGAGA...AGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTCCTTGAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR TCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGCTCAAACCTGTAATTTaGACCACGAGTCCTGATCTT +
Preference number: 4 (lower is better)
Translates to: ECKGRRKTKATGEKTACQLKPVI*TTSPDL
Trigger: AAGATCAGGACTCGTGGTTCAAATTACAGGTTTGAG...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355832.10
CDS-3UTR TCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCAATTCCTTCACCCACTaGTGCATCACTGTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVNSFTH*CITVVG
Trigger: TCCAACAACAGTGATGCATCAGTGGGTGAAGGAATT...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCACTTGTAAGCAGTTTTaGCCTGTACTGGGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: KECKGRRKTKATGEKTACTCKQF*PVLGKH
Trigger: ATGCTTCCCCAGTACAGGTCAAAACTGCTTACAAGT...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTAACAGCAATACTCGCTaGCCCTGCTTGTGCCATATT +
Preference number: 4 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLNSNTR*PCLCHI
Trigger: AATATGGCACAAGCAGGGTCAGCGAGTATTGCTGTT...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCGCTCCAAAGGCTGGTTaGATCCTTCTTTTTAGATGG +
Preference number: 4 (lower is better)
Translates to: KECKGRRKTKATGEKTACAPKAG*ILLFRW
Trigger: CCATCTAAAAAGAAGGATTCAACCAGCCTTTGGAGC...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp CCTGTGAGGTACCATACCTCTGGACAGGGAGCTGAGGGAGACGGAGCTCTGTTTATTTCCACTAATCACTaGCAACTCTTCTGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: PVRYHTSGQGAEGDGALFISTNH*QLFWSR
Trigger: TCTGGACCAGAAGAGTTGTCAGTGATTAGTGGAAAT...AAACAGAGCTCCGTCTCCCTCAGCTCCCTGTCCAGAGGTATGGTACCTCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR TCA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGTGGCATCGTGCTTCATaGCACTGTGCACGCCAACTG +
Preference number: 4 (lower is better)
Translates to: KGECQGECIPCFFKGPIGWHRAS*HCARQL
Trigger: CAGTTGGCGTGCACAGTGTCATGAAGCACGATGCCA...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp TGTCTCTTCTCCAAGCCTATCATTGCTAGTTACATTACTACTCATGTGAGGGTCGCTCCCAGACACCGCTaGCGAGAGAGCCTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: CLFSKPIIASYITTHVRVAPRHR*RESLSA
Trigger: AGCACTGAGGCTCTCTCGTCAGCGGTGTCTGGGAGC...GACCCTCACATGAGTAGTAATGTAACTAGCAATGATAGGCTTGGAGAAGAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR TCA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGAGCGAGGGGCCCGGATaGAGAGTCTGCATCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRSEGPG*RVCIFC
Trigger: GCAGAAGATGCAGACTCTTCATCCGGGCCCCTCGCT...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp TGGGCAGCAGGGCAGAAGCTTCCTGCAGGTGCCCGCTTTCACTTTCTAAACGCTAGCAGTATTCTGGCTTaGGTTTCCAAATTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: WAAGQKLPAGARFHFLNASSILA*VSKFLH
Trigger: GTGAAGGAATTTGGAAACTCAAGCCAGAATACTGCT...AGCGTTTAGAAAGTGAAAGCGGGCACCTGCAGGAAGCTTCTGCCCTGCTGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR TCA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACCAGAACCCTCCTCTCTaGGTCACATGGATGAGCAGA +
Preference number: 4 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHQNPPL*VTWMSR
Trigger: TCTGCTCATCCATGTGACTCAGAGAGGAGGGTTCTG...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAAATGCTTCATGAGTaGACAAGGTCAGCAGATCAC +
Preference number: 4 (lower is better)
Translates to: KECKGRRKTKATGEKTACQMLHE*TRSADH
Trigger: GTGATCTGCTGACCTTGTTCACTCATGAAGCATTTG...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCGCAGTCTGTGTCATGTaGTTCTCTAAATGCATGGAG +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVAVCVM*FSKCME
Trigger: CTCCATGCATTTAGAGAATCACATGACACAGACTGC...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AACACCAGACACTGCTCCCAGACACCGCTGACGAGAGAGCCTCAGTGCTTTCAGGGAAGAATGGGAAAATaGCATTATAGCAGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: NTRHCSQTPLTREPQCFQGRMGK*HYSSSL
Trigger: CAGACTGCTGCTATAATGTCATTTTCCCATTCTTCC...CTGAAAGCACTGAGGCTCTCTCGTCAGCGGTGTCTGGGAGCAGTGTCTGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR TCA 90 bp GTAGTGAGATACAAACAGCCTTGGCTGGAATCCAAACCGCAGAAACAAGAAAGCTCTTGCCCCTCCCTGTaGGGTACCATACCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: VVRYKQPWLESKPQKQESSCPSL*GTIPLD
Trigger: GTCCAGAGGTATGGTACCTCACAGGGAGGGGCAAGA...GCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR TCA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTTATCTGCCAGTTGGCTaGCAATTTCTTCTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: PARRHGNNVSDLHTETPPYLPVG*QFLLPV
Trigger: AACTGGCAGAAGAAATTGTCAGCCAACTGGCAGATA...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR GCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGGGCGCTAGGCTCTACTaGCTGGATCTGATGTCGGTC +
Preference number: 4 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRGARLY*LDLMSV
Trigger: GACCGACATCAGATCCAGGCAGTAGAGCCTAGCGCC...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp TTGGGAAAAAGTCATCATCAATCTCCTGCACTGGCACTTTCTTCTGCCGTTTCCACTGGCACTTTCTTCTaGCGTTTCCCGCCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: LGKSHHQSPALALSSAVSTGTFF*RFPPLG
Trigger: GCCCAAGGGCGGGAAACGGCAGAAGAAAGTGCCAGT...GGAAACGGCAGAAGAAAGTGCCAGTGCAGGAGATTGATGATGACTTTTTCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR GCA 90 bp ATCTGGGTACCAAAAGGTGTCATCTGGCCAGTGCGGATGAGCTCTTCCCAGGCATCATCATCAATCTCCTaGACTGGCACTTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: IWVPKGVIWPVRMSSSQASSSIS*TGTFFC
Trigger: GCAGAAGAAAGTGCCAGTGCAGGAGATTGATGATGA...TGCCTGGGAAGAGCTCATCCGCACTGGCCAGATGACACCTTTTGGTACCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR GCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCTGGAACATCATGGTCTaGTCCAAAGGCTGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: KECKGRRKTKATGEKTACWNIMV*SKGWLN
Trigger: ATTCAACCAGCCTTTGGAGCAGACCATGATGTTCCA...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGAAGCAGGGAACTTCTTaGGTTTTGGAACATCATGGT +
Preference number: 4 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWKQGTS*VLEHHG
Trigger: ACCATGATGTTCCAAAACGCAAGAAGTTCCCTGCTT...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGAAACATAATCGTCATTaGTCTGTTCCTTGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: ECKGRRKTKATGEKTACQKHNRH*SVPWPH
Trigger: GTGAGGCCAAGGAACAGAGCAATGACGATTATGTTT...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTGAAAAAGATGCCCTCTaGTTAAAGGAAAGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LASQPARKGNVKESAYPAEKDAL*LKESQG
Trigger: ACCCTGGCTTTCCTTTAAGCAGAGGGCATCTTTTTC...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTGGAGAGTGCATACCCTaGTTCTTTAAAGGGCCAATT +
Preference number: 4 (lower is better)
Translates to: LASQPARKGNVKESAYPAGECIP*FFKGPI
Trigger: AATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCC...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGGGCCCTTCACATTaGCATTCTGGAAGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: KECKGRRKTKATGEKTACQGPSH*HSGSEN
Trigger: ATTTTCACTTCCAGAATGGCAATGTGAAGGGCCCTG...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp AAACTTCAAGGAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTTGCAGCTCAAGGGCCTaGGCGCTAGGCTCTACTGCC +
Preference number: 4 (lower is better)
Translates to: KLQGGHLPWCSKFKTDLTCSSRA*ALGSTA
Trigger: GGCAGTAGAGCCTAGCGCCCAGGCCCTTGAGCTGCA...AGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTCCTTGAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR CCA 90 bp GAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTGCTCTATTGTGCTGGGAGGCACGGCTaGCCTCATGGATGGCATTGT +
Preference number: 4 (lower is better)
Translates to: EVTYRGAQNSKQTLLLYCAGRHG*PHGWHC
Trigger: ACAATGCCATCCATGAGGCCAGCCGTGCCTCCCAGC...ACAATAGAGCAGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR CCA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTCCTCCAAGGATGGCCTaGAGATGCTTTTGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLPPRMA*RCFCFA
Trigger: TGCAAAACAAAAGCATCTCCAGGCCATCCTTGGAGG...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCATCCCAGGCAGTCTCCTaGACAGGCATGAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSSQAVS*TGMSML
Trigger: CAGCATGCTCATGCCTGTCCAGGAGACTGCCTGGGA...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCCTGTTTGAGCCTGGCTaGGTCTTTCTCTTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVLFEPG*VFLFCK
Trigger: CTTACAAAAGAGAAAGACCCAGCCAGGCTCAAACAG...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGTGTGGCCAGTCCAGGTaGGAACACCAGACACTGCTC +
Preference number: 4 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRCGQSR*EHQTLL
Trigger: GAGCAGTGTCTGGTGTTCCCACCTGGACTGGCCACA...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGCCTGACAGCATCTTTTaGGTAAAGGAACAAATGTGC +
Preference number: 4 (lower is better)
Translates to: ECKGRRKTKATGEKTACQPDSIF*VKEQMC
Trigger: GCACATTTGTTCCTTTACCCAAAAGATGCTGTCAGG...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp GTAGTGAGATACAAACAGCCTTGGCTGGAATCCAAACCGCAGAAACAAGAAAGCCATGGTAACAACGGCTaGGTCTGCTGTGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VVRYKQPWLESKPQKQESHGNNG*VCCGLQ
Trigger: CTGCAGCCCACAGCAGACCCAGCCGTTGTTACCATG...GCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTAAGGGTTTGGAGAAATaGGTCCTTTTATGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: PARRHGNNVSDLHTETPPKGLEK*VLLWRV
Trigger: CACCCTCCATAAAAGGACCCATTTCTCCAAACCCTT...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp CCTGTGAGGTACCATACCTCTGGACAGGGAGCTGAGGGAGACGGAGCTCTGTTTCTGTTGGCAAGGGTTTaGAGAAATGGGTCCTTTTAT +
Preference number: 4 (lower is better)
Translates to: PVRYHTSGQGAEGDGALFLLARV*RNGSFY
Trigger: ATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAG...AAACAGAGCTCCGTCTCCCTCAGCTCCCTGTCCAGAGGTATGGTACCTCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR CCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGATACCACTTACTGTTaGCAAGGGTTTGGAGAAATG +
Preference number: 4 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWDTTYC*QGFGEM
Trigger: CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATC...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp GGGAAATACTCAGACTCTTCACCCTCAGAGTCTCCCTCTGCCTCTGGCCTCATGTTTTTCTCCTGTTTCTaGGGGATCTGGGTACCAAAA +
Preference number: 4 (lower is better)
Translates to: GKYSDSSPSESPSASGLMFFSCF*GIWVPK
Trigger: TTTTGGTACCCAGATCCCTCAGAAACAGGAGAAAAA...CATGAGGCCAGAGGCAGAGGGAGACTCTGAGGGTGAAGAGTCTGAGTATTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR TCA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACACTTTCCCGGGAAGATaGAGTCAAAGAGCGACCACA +
Preference number: 4 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHTFPGR*SQRATT
Trigger: TGTGGTCGCTCTTTGACTTCATCTTCCCGGGAAAGT...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTGGTACCATCCATCTTaGGATAGGTATACTTTTGGG +
Preference number: 4 (lower is better)
Translates to: LASQPARKGNVKESAYPAWYHPS*DRYTFG
Trigger: CCCAAAAGTATACCTATCTCAAGATGGATGGTACCA...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTAATCAGTGGCTGTCTTaGAGCTATTGTAGTGGTACC +
Preference number: 4 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLNQWLS*SYCSGT
Trigger: GGTACCACTACAATAGCTTCAAGACAGCCACTGATT...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGTTGCCCCCGTCAGGTTaGCACCTAAGCCGCCCACCC +
Preference number: 4 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLLPPSG*HLSRPP
Trigger: GGGTGGGCGGCTTAGGTGTCAACCTGACGGGGGCAA...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGACATTACTACTCATGTaGGGGTCATCTTTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: ECKGRRKTKATGEKTACQTLLLM*GSSFKG
Trigger: TCCTTTGAAAGATGACCCTCACATGAGTAGTAATGT...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTATTTCCACTAATCACTaGCAACTCTTCTGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: PARRHGNNVSDLHTETPPISTNH*QLFWSR
Trigger: TCTGGACCAGAAGAGTTGTCAGTGATTAGTGGAAAT...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTAAAGCCAGGGTAAACTaGATACCCTACAGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLKARVN*IPYSFP
Trigger: TGGAAAGCTGTAGGGTATTCAGTTTACCCTGGCTTT...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCGGAAGAATGGGAAAATaGCATTATAGCAGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVGRMGK*HYSSSL
Trigger: CAGACTGCTGCTATAATGTCATTTTCCCATTCTTCC...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGGAAGTAGTCTTAAGCTaGGCAGCCAGACGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: KGECQGECIPCFFKGPIGEVVLS*AARRPG
Trigger: ACCTGGACGTCTGGCTGCTCAGCTTAAGACTACTTC...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp CCTGTGAGGTACCATACCTCTGGACAGGGAGCTGAGGGAGACGGAGCTCTGTTTACAACCTATCGATATTaGTACCACTTACTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: PVRYHTSGQGAEGDGALFTTYRY*YHLLLA
Trigger: TGCCAACAGTAAGTGGTATCAATATCGATAGGTTGT...AAACAGAGCTCCGTCTCCCTCAGCTCCCTGTCCAGAGGTATGGTACCTCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR TCA 90 bp TTTGTCGGTGGTAGATCTTTTCTTCAATGGTGCCCGCAGTCAGGAGCCTGTACACACCAAATGACAGCGTaGGGAGTGTGGTTGGTAGAA +
Preference number: 4 (lower is better)
Translates to: FVGGRSFLQWCPQSGACTHQMTA*GVWLVE
Trigger: TTCTACCAACCACACTCCTCACGCTGTCATTTGGTG...TGTACAGGCTCCTGACTGCGGGCACCATTGAAGAAAAGATCTACCACCGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR TCA 90 bp ATCTGGGTACCAAAAGGTGTCATCTGGCCAGTGCGGATGAGCTCTTCCCAGGCAAAAGTTGTGTTCTTATaGCATTCAGCGCATCGCGTT +
Preference number: 4 (lower is better)
Translates to: IWVPKGVIWPVRMSSSQAKVVFL*HSAHRV
Trigger: AACGCGATGCGCTGAATGTCATAAGAACACAACTTT...TGCCTGGGAAGAGCTCATCCGCACTGGCCAGATGACACCTTTTGGTACCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR GCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGAGCGACTCCGACTTCTaGTGGTGCGGGGAGGCCCGT +
Preference number: 4 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMSDSDF*WCGEAR
Trigger: ACGGGCCTCCCCGCACCAGCAGAAGTCGGAGTCGCT...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355832.10
CDS-3UTR GCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGACGGGCCGTGGCGCCTaGGCCCTCAGCTCAACCATA +
Preference number: 4 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLTGRGA*ALSSTI
Trigger: TATGGTTGAGCTGAGGGCGCAGGCGCCACGGCCCGT...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355832.10
CDS-3UTR GCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGCAGTTTTGCTTGATCTaGCAAATACTTTTCGAAGCC +
Preference number: 4 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWQFCLI*QILFEA
Trigger: GGCTTCGAAAAGTATTTGGCAGATCAAGCAAAACTG...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCTTATCTGGATGGTCTTaGCCAATCCCATTTCATCTC +
Preference number: 4 (lower is better)
Translates to: KECKGRRKTKATGEKTACLSGWS*PIPFHL
Trigger: GAGATGAAATGGGATTGGGCAAGACCATCCAGATAA...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355832.10
CDS-3UTR GCA 90 bp AACACCAGACACTGCTCCCAGACACCGCTGACGAGAGAGCCTCAGTGCTTTCAGAGTTCCTGCAAAAATTaGACTTGTTTCAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: NTRHCSQTPLTREPQCFQSSCKN*TCFSAL
Trigger: CAGAGCACTGAAACAAGTGCAATTTTTGCAGGAACT...CTGAAAGCACTGAGGCTCTCTCGTCAGCGGTGTCTGGGAGCAGTGTCTGGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR GCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCAAGCAGGGAACTTCTTaGGTTTTGGAACATCATGGT +
Preference number: 4 (lower is better)
Translates to: KECKGRRKTKATGEKTACKQGTS*VLEHHG
Trigger: ACCATGATGTTCCAAAACGCAAGAAGTTCCCTGCTT...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCTTCTGGTCCAGATACTaGATTTGTCTCTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: KECKGRRKTKATGEKTACFWSRY*ICLFSK
Trigger: CTTGGAGAAGAGACAAATGCAGTATCTGGACCAGAA...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTCAGGGTCTCTTCTTCTaGCACACTATGATGTTTTGT +
Preference number: 4 (lower is better)
Translates to: PARRHGNNVSDLHTETPPQGLFF*HTMMFC
Trigger: ACAAAACATCATAGTGTGGCAGAAGAAGAGACCCTG...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGAGTTCTTAGGCTTTTaGTTTGGTCTCAGATGTTTC +
Preference number: 4 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWEFLGF*FGLRCF
Trigger: GAAACATCTGAGACCAAAGCAAAAGCCTAAGAACTC...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AGAAGACAGCCTGCCAGCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCAGATGTTGATGAAGGATaGTGCACAGAGAAGTTAGAA +
Preference number: 4 (lower is better)
Translates to: RRQPASLQTREAWSGVTSDVDEG*CTEKLE
Trigger: TTCTAACTTCTCTGTGCAGCATCCTTCATCAACATC...TGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AGAAGACAGCCTGCCAGCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCAGAGAGGAAAAGAGCATaGCAGAGAATACAAATCCAA +
Preference number: 4 (lower is better)
Translates to: RRQPASLQTREAWSGVTSERKRA*QRIQIQ
Trigger: TTGGATTTGTATTCTCTGGCATGCTCTTTTCCTCTC...TGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AGAAGACAGCCTGCCAGCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCAACCATTCTACTTAACTaGATTGTTCTCCAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: RRQPASLQTREAWSGVTSTILLN*IVLQVP
Trigger: AGGGACTTGGAGAACAATGCAGTTAAGTAGAATGGT...TGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AGAAGACAGCCTGCCAGCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCACTCTCTTATTCTATCTaGCAGTTGGCTGACAATTTC +
Preference number: 4 (lower is better)
Translates to: RRQPASLQTREAWSGVTSLSYSI*QLADNF
Trigger: GAAATTGTCAGCCAACTGGCAGATAGAATAAGAGAG...TGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR CCA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTGGTGACAGCAGCATTTaGATTTCGAATTTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: PARRHGNNVSDLHTETPPGDSSI*ISNFVS
Trigger: GGACACAAAATTCGAAATCCAAATGCTGCTGTCACC...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp TGCCACTTGAAGCTGGAGGGGATAAGAAATGCTGGCATCTTGCCCCTCCCTGTGGGTGACAGCAGCATTTaGATTTCGAATTTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: CHLKLEGIRNAGILPLPVGDSSI*ISNFVS
Trigger: GGACACAAAATTCGAAATCCAAATGCTGCTGTCACC...CACAGGGAGGGGCAAGATGCCAGCATTTCTTATCCCCTCCAGCTTCAAGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR CCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCCTTAGGCTTTTGCTTTaGTCTCAGATGTTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVLRLLL*SQMFLQ
Trigger: CTGGAGAAACATCTGAGACCAAAGCAAAAGCCTAAG...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGGCTTTCAGGGCATCCTaGGCCACTCGGTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRAFRAS*ATRLAS
Trigger: AGAAGCCAACCGAGTGGCCCAGGATGCCCTGAAAGC...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTTCATGATGCCATCCTaGCACTTCTCTGTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLFMMPS*HFSVGD
Trigger: ATCTCCAACAGAGAAGTGCCAGGATGGCATCATGAA...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp TCTTCTTCTAGTTCATCATCAGGAAGACCTTTGAGATTCTTGGGACCTCCAGAACCTGCAGTATCTCCCTaGTGCTGGCCTGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: SSSSSSSGRPLRFLGPPEPAVSP*CWPGHQ
Trigger: CTGATGGCCAGGCCAGCACCAGGGAGATACTGCAGG...TTCTGGAGGTCCCAAGAATCTCAAAGGTCTTCCTGATGATGAACTAGAAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR CCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGGTGATGCAGATAACTTaGATTCAAACTCCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: ECKGRRKTKATGEKTACQVMQIT*IQTPAV
Trigger: TACTGCAGGAGTTTGAATCCAAGTTATCTGCATCAC...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCCCTGACAGCATCTTTTaGGTAAAGGAACAAATGTGC +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVPDSIF*VKEQMC
Trigger: GCACATTTGTTCCTTTACCCAAAAGATGCTGTCAGG...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCTGTTGGCAAGGGTTTaGAGAAATGGGTCCTTTTAT +
Preference number: 4 (lower is better)
Translates to: KECKGRRKTKATGEKTACLLARV*RNGSFY
Trigger: ATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAG...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTCTAGACCCCCTAACTTaGAAAGACCTGAAGAAGTTA +
Preference number: 4 (lower is better)
Translates to: PARRHGNNVSDLHTETPPLDPLT*KDLKKL
Trigger: TAACTTCTTCAGGTCTTTCCAAGTTAGGGGGTCTAG...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR TCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGTCTCCTCGGAGCTGCTaGTGCGCACCCCACAGCAGA +
Preference number: 4 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMSPRSC*CAPHSR
Trigger: TCTGCTGTGGGGTGCGCATCAGCAGCTCCGAGGAGA...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGTCTACTGCCTGGATCTaGTGTCGGTCGATGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRSTAWI*CRSMCS
Trigger: GCTGCACATCGACCGACATCAGATCCAGGCAGTAGA...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp AAACTTCAAGGAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTGCATTGTCCACCTGCTaGAGCACTCCCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: KLQGGHLPWCSKFKTDLTALSTC*STPCSS
Trigger: GCTGGAACAGGGAGTGCTTCAGCAGGTGGACAATGC...AGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTCCTTGAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR TCA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCACTGCTGGTGGCAGCTTaGGGGCTAAGCTGTTCAATA +
Preference number: 4 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSLLVAA*GLSCSI
Trigger: TATTGAACAGCTTAGCCCTCAAGCTGCCACCAGCAG...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGGACAGAATGATCCGATaGGGGGTGCGAAACTGTTTG +
Preference number: 4 (lower is better)
Translates to: KGECQGECIPCFFKGPIGDRMIR*GVRNCL
Trigger: CAAACAGTTTCGCACCCCTCATCGGATCATTCTGTC...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCTTCCAGTACCCAAACTaGTCTTCTTCTAGTTCATCA +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVFQYPN*SSSSSS
Trigger: TGATGAACTAGAAGAAGATCAGTTTGGGTACTGGAA...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTTCCAGTACCCAAACTaGTCTTCTTCTAGTTCATCA +
Preference number: 4 (lower is better)
Translates to: LASQPARKGNVKESAYPAFQYPN*SSSSSS
Trigger: TGATGAACTAGAAGAAGATCAGTTTGGGTACTGGAA...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACAGCATCTGCCTTGACTaGGAAAACAGCAATACTCGC +
Preference number: 4 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHSICLD*ENSNTR
Trigger: GCGAGTATTGCTGTTTTCTCAGTCAAGGCAGATGCT...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACGTCCAGCATCTGCCTTaGCTGAGAAAACAGCAATAC +
Preference number: 4 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHVQHLP*LRKQQY
Trigger: GTATTGCTGTTTTCTCAGTCAAGGCAGATGCTGGAC...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp ATCATTGCTAGTTACATTACTACTCATGTGAGGGTCATCTTTCAAAGGATCACTTTGCCCCCGTCAGGTTaGCACCTAAGCCGCCCACCC +
Preference number: 4 (lower is better)
Translates to: IIASYITTHVRVIFQRITLPPSG*HLSRPP
Trigger: GGGTGGGCGGCTTAGGTGTCAACCTGACGGGGGCAA...AGTGATCCTTTGAAAGATGACCCTCACATGAGTAGTAATGTAACTAGCAATGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR TCA 90 bp CCTGTGAGGTACCATACCTCTGGACAGGGAGCTGAGGGAGACGGAGCTCTGTTTAGAGATCATTGGATTTaGAAAACCGCCTTTGTTTTG +
Preference number: 4 (lower is better)
Translates to: PVRYHTSGQGAEGDGALFRDHWI*KTAFVL
Trigger: CAAAACAAAGGCGGTTTTTCAAATCCAATGATCTCT...AAACAGAGCTCCGTCTCCCTCAGCTCCCTGTCCAGAGGTATGGTACCTCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR TCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGAGATTTCTCTTCAGATaGTGTGGCATCATTTACAGA +
Preference number: 4 (lower is better)
Translates to: ECKGRRKTKATGEKTACQRFLFR*CGIIYR
Trigger: TCTGTAAATGATGCCACATCATCTGAAGAGAAATCT...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCACATTACTACTCATGTaGGGGTCATCTTTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: KECKGRRKTKATGEKTACTLLLM*GSSFKG
Trigger: TCCTTTGAAAGATGACCCTCACATGAGTAGTAATGT...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp TTTGTCGGTGGTAGATCTTTTCTTCAATGGTGCCCGCAGTCAGGAGCCTGTACACAAAAAGCTTCTGTTTaGGCCTGGCTGGGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: FVGGRSFLQWCPQSGACTQKASV*AWLGLS
Trigger: AGAAAGACCCAGCCAGGCTCAAACAGAAGCTTTTTG...TGTACAGGCTCCTGACTGCGGGCACCATTGAAGAAAAGATCTACCACCGACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR TCA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACTTCCCTCCTTTTTCATaGTGCCATCCTGGCACTTCT +
Preference number: 4 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHFPPFS*CHPGTS
Trigger: AGAAGTGCCAGGATGGCATCATGAAAAAGGAGGGAA...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp CCTGTGAGGTACCATACCTCTGGACAGGGAGCTGAGGGAGACGGAGCTCTGTTTAATTTACCAGTACCTTaGAAAGAGGATCTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: PVRYHTSGQGAEGDGALFNLPVP*KEDLSK
Trigger: CTTGGAAAGATCCTCTTTTCAAGGTACTGGTAAATT...AAACAGAGCTCCGTCTCCCTCAGCTCCCTGTCCAGAGGTATGGTACCTCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR TCA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCACAGAACCCTCCTCTCTaGGTCACATGGATGAGCAGA +
Preference number: 4 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSQNPPL*VTWMSR
Trigger: TCTGCTCATCCATGTGACTCAGAGAGGAGGGTTCTG...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCATAGTATTTGCTACTTaGAGAGGAGGCTATACCTTG +
Preference number: 4 (lower is better)
Translates to: KECKGRRKTKATGEKTACIVFAT*RGGYTL
Trigger: CAAGGTATAGCCTCCTCTTCAAGTAGCAAATACTAT...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTACAACCTATCGATATTaGTACCACTTACTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: LASQPARKGNVKESAYPATTYRY*YHLLLA
Trigger: TGCCAACAGTAAGTGGTATCAATATCGATAGGTTGT...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp ATAATCTTCATCTCCATCATCTCGGTATCTTCCCACTTTCCGACCTCCTCCTCCTATCTCAGGAGGTGGTaGCACCTGCTATTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: IIFISIISVSSHFPTSSSYLRRW*HLLFSV
Trigger: CACACTGAATAGCAGGTGTCACCACCTCCTGAGATA...GGAGGAGGAGGTCGGAAAGTGGGAAGATACCGAGATGATGGAGATGAAGATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR GCA 90 bp GCATTCTGTAGTATGATAGGTTTTCTATTTCAGACAGCTAAGAATGCCTTACAGACGGGCCGTGGCGCCTaGGCCCTCAGCTCAACCATA +
Preference number: 4 (lower is better)
Translates to: AFCSMIGFLFQTAKNALQTGRGA*ALSSTI
Trigger: TATGGTTGAGCTGAGGGCGCAGGCGCCACGGCCCGT...CTGTAAGGCATTCTTAGCTGTCTGAAATAGAAAACCTATCATACTACAGAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR GCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGTCCACACCCAAACCCTaGAGCTCAAGGGCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMSTPKP*SSRAWA
Trigger: CGCCCAGGCCCTTGAGCTGCAGGGTTTGGGTGTGGA...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp ATCTGGGTACCAAAAGGTGTCATCTGGCCAGTGCGGATGAGCTCTTCCCAGGCACAGTTTTGCTTGATCTaGCAAATACTTTTCGAAGCC +
Preference number: 4 (lower is better)
Translates to: IWVPKGVIWPVRMSSSQAQFCLI*QILFEA
Trigger: GGCTTCGAAAAGTATTTGGCAGATCAAGCAAAACTG...TGCCTGGGAAGAGCTCATCCGCACTGGCCAGATGACACCTTTTGGTACCCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR GCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCTGGAGTTTCTTGATGTaGTTTTTCAAACGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVWSFLM*FFKRSS
Trigger: AGAGGAGCGTTTGAAAAAGCACATCAAGAAACTCCA...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGAGAATTCCTCCTGCCTaGTGGCAGTGCAATTCCCAC +
Preference number: 4 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRRIPPA*WQCNSH
Trigger: GTGGGAATTGCACTGCCAGCAGGCAGGAGGAATTCT...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355832.10
CDS-3UTR GCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCAGAGATCAGGGTGGTTaGAAATTTTTCTTAGGGCTA +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVRDQGG*KFFLGL
Trigger: TAGCCCTAAGAAAAATTTGCAACCACCCTGATCTCT...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTAGAGATCAGGGTGGTTaGAAATTTTTCTTAGGGCTA +
Preference number: 4 (lower is better)
Translates to: PARRHGNNVSDLHTETPPRDQGG*KFFLGL
Trigger: TAGCCCTAAGAAAAATTTGCAACCACCCTGATCTCT...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCAGATGACAACTCTGTTTaGCCCCGTCAGGTTGACACC +
Preference number: 4 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSDDNSV*PRQVDT
Trigger: GGTGTCAACCTGACGGGGGCAAACAGAGTTGTCATC...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCAGTTCCTGCAAAAATTaGACTTGTTTCAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: KECKGRRKTKATGEKTACSSCKN*TCFSAL
Trigger: CAGAGCACTGAAACAAGTGCAATTTTTGCAGGAACT...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTTCTGGTCCAGATACTaGATTTGTCTCTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLFWSRY*ICLFSK
Trigger: CTTGGAGAAGAGACAAATGCAGTATCTGGACCAGAA...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AGAAGACAGCCTGCCAGCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCAGCTCTTCCACTAAAATaGTCAGGGACATTATCTTTT +
Preference number: 4 (lower is better)
Translates to: RRQPASLQTREAWSGVTSALPLK*SGTLSF
Trigger: AAAAGATAATGTCCCTGAGCATTTTAGTGGAAGAGC...TGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACTTGGATTCAAACTCCTaGAGTATCTCCCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHLDSNS*SISLVL
Trigger: CAGCACCAGGGAGATACTGCAGGAGTTTGAATCCAA...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTGAGAGGAAAAGAGCATaGCAGAGAATACAAATCCAA +
Preference number: 4 (lower is better)
Translates to: PARRHGNNVSDLHTETPPERKRA*QRIQIQ
Trigger: TTGGATTTGTATTCTCTGGCATGCTCTTTTCCTCTC...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGAGTATGATACCCAAATaGTTCATGAGTGAACAAGGT +
Preference number: 4 (lower is better)
Translates to: ECKGRRKTKATGEKTACQSMIPK*FMSEQG
Trigger: ACCTTGTTCACTCATGAAGCATTTGGGTATCATACT...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCCACCTTGCTCCTACTaGATTATAGCTTTTGATAGT +
Preference number: 4 (lower is better)
Translates to: KECKGRRKTKATGEKTACPPCSY*IIAFDS
Trigger: ACTATCAAAAGCTATAATGCAGTAGGAGCAAGGTGG...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCAATCCAACAATTCTGTaGAGGCAGAGCTATACTTAC +
Preference number: 4 (lower is better)
Translates to: KECKGRRKTKATGEKTACNPTIL*RQSYTY
Trigger: GTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCAATCCAACAATTCTGTaGAGGCAGAGCTATACTTAC +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVNPTIL*RQSYTY
Trigger: GTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGGGAGGGGATAAGAAATaGTGGCATCTTGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRGGDKK*WHLAPP
Trigger: GGGAGGGGCAAGATGCCAGCATTTCTTATCCCCTCC...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR GCA 90 bp AAACTTCAAGGAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTGAGGCATCTTGGGACTaGATCCTCCTCCAGACTGGC +
Preference number: 4 (lower is better)
Translates to: KLQGGHLPWCSKFKTDLTEASWD*ILLQTG
Trigger: GCCAGTCTGGAGGAGGATGCAGTCCCAAGATGCCTC...AGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTCCTTGAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR CCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGGCTGCCAAGACTGGATaGCCCCGGCTCTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLAAKTG*PRLCIL
Trigger: GAGGATGCAGAGCCGGGGCCATCCAGTCTTGGCAGC...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp ATAATCTTCATCTCCATCATCTCGGTATCTTCCCACTTTCCGACCTCCTCCTCCGTTTTTATTTTGCACTaGGGCTGGAGGCGTGACTGG +
Preference number: 4 (lower is better)
Translates to: IIFISIISVSSHFPTSSSVFILH*GWRRDW
Trigger: CCAGTCACGCCTCCAGCCCCAGTGCAAAATAAAAAC...GGAGGAGGAGGTCGGAAAGTGGGAAGATACCGAGATGATGGAGATGAAGATTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR CCA 90 bp AGAAGACAGCCTGCCAGCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCACTAACACCTGTCTGCTaGTACTTAAAAAGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: RRQPASLQTREAWSGVTSLTPVC*YLKSFL
Trigger: CAAAAAGCTTTTTAAGTACCAGCAGACAGGTGTTAG...TGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000355832.10
CDS-3UTR CCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCATGCATCACTGTTGTTaGACAGACAATTACAGTTGG +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVMHHCC*TDNYSW
Trigger: CCAACTGTAATTGTCTGTCCAACAACAGTGATGCAT...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCAAGCCGCCCACCCGCGTaGTCAGAAGAAACACAAATA +
Preference number: 4 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSSRPPA*SEETQI
Trigger: TATTTGTGTTTCTTCTGACCACGCGGGTGGGCGGCT...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGTTTTTAGATGGCATTTaGGTGTCTGAACATCTGATC +
Preference number: 4 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWFLDGI*VSEHLI
Trigger: GATCAGATGTTCAGACACCCAAATGCCATCTAAAAA...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCTTTCTTCACCAGGTGTaGAATTCGAGTTCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVFLHQV*NSSSFK
Trigger: TTTGAAGGAACTCGAATTCCACACCTGGTGAAGAAA...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCTCTGGCAGAATCAGGTaGTTTCTAGCTCTCATTTTA +
Preference number: 4 (lower is better)
Translates to: KECKGRRKTKATGEKTACSGRIR*FLALIL
Trigger: TAAAATGAGAGCTAGAAACCACCTGATTCTGCCAGA...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTGTGATGCAGATAACTTaGATTCAAACTCCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: LASQPARKGNVKESAYPAVMQIT*IQTPAV
Trigger: TACTGCAGGAGTTTGAATCCAAGTTATCTGCATCAC...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp AGAAGACAGCCTGCCAGCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGTTTAGCAGTATTCTaGCTTGAGTTTCCAAATTCC +
Preference number: 4 (lower is better)
Translates to: RRQPASLQTREAWSGVTSCLAVF*LEFPNS
Trigger: GGAATTTGGAAACTCAAGCCAGAATACTGCTAAACA...TGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGCCTGACCTTTGTGGGTaGCAAATGGTAAATATAAAT +
Preference number: 4 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWPDLCG*QMVNIN
Trigger: ATTTATATTTACCATTTGCCACCCACAAAGGTCAGG...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGGTGCATGCATGTGTGTaGTTTTTATGTACCTACTTT +
Preference number: 4 (lower is better)
Translates to: ECKGRRKTKATGEKTACQVHACV*FLCTYF
Trigger: AAAGTAGGTACATAAAAACCACACACATGCATGCAC...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTGCATGCATGTGTGTaGTTTTTATGTACCTACTTT +
Preference number: 4 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWVHACV*FLCTYF
Trigger: AAAGTAGGTACATAAAAACCACACACATGCATGCAC...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp TTTGTCGGTGGTAGATCTTTTCTTCAATGGTGCCCGCAGTCAGGAGCCTGTACAAAGAGAGGCCTGGAGTaGTGTCACTTCATGGTAACA +
Preference number: 4 (lower is better)
Translates to: FVGGRSFLQWCPQSGACTKRGLE*CHFMVT
Trigger: TGTTACCATGAAGTGACACCACTCCAGGCCTCTCTT...TGTACAGGCTCCTGACTGCGGGCACCATTGAAGAAAAGATCTACCACCGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR CCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGGATTCTCTAAATGCATaGAGAATACACACCAAACCT +
Preference number: 4 (lower is better)
Translates to: ECKGRRKTKATGEKTACQDSLNA*RIHTKP
Trigger: AGGTTTGGTGTGTATTCTCCATGCATTTAGAGAATC...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCCACCACTTTCTTGCTTaGTTGCCATTTCTTCATTAT +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVHHFLA*LPFLHY
Trigger: ATAATGAAGAAATGGCAATCAAGCAAGAAAGTGGTG...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp ATCTGGGTACCAAAAGGTGTCATCTGGCCAGTGCGGATGAGCTCTTCCCAGGCACACCACTTTCTTGCTTaGTTGCCATTTCTTCATTAT +
Preference number: 4 (lower is better)
Translates to: IWVPKGVIWPVRMSSSQAHHFLA*LPFLHY
Trigger: ATAATGAAGAAATGGCAATCAAGCAAGAAAGTGGTG...TGCCTGGGAAGAGCTCATCCGCACTGGCCAGATGACACCTTTTGGTACCCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR TCA 90 bp AAACTTCAAGGAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTATGTCGTACATGACGTaGGGTCATCCAGGACCGACC +
Preference number: 4 (lower is better)
Translates to: KLQGGHLPWCSKFKTDLTMSYMT*GHPGPT
Trigger: GGTCGGTCCTGGATGACCTCACGTCATGTACGACAT...AGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTCCTTGAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR TCA 90 bp GAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTGCTCTATTGTCTGCTGGTGGCAGCTTaGGGGCTAAGCTGTTCAATA +
Preference number: 4 (lower is better)
Translates to: EVTYRGAQNSKQTLLLYCLLVAA*GLSCSI
Trigger: TATTGAACAGCTTAGCCCTCAAGCTGCCACCAGCAG...ACAATAGAGCAGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR TCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCATACTTTTCGAAGCCTaGTGCTTCATTAAGCATGAT +
Preference number: 4 (lower is better)
Translates to: KECKGRRKTKATGEKTACILFEA*CFIKHD
Trigger: ATCATGCTTAATGAAGCATCAGGCTTCGAAAAGTAT...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCAACTTTCCCGGGAAGATaGAGTCAAAGAGCGACCACA +
Preference number: 4 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSTFPGR*SQRATT
Trigger: TGTGGTCGCTCTTTGACTTCATCTTCCCGGGAAAGT...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACACTTGTAAGCAGTTTTaGCCTGTACTGGGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHTCKQF*PVLGKH
Trigger: ATGCTTCCCCAGTACAGGTCAAAACTGCTTACAAGT...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACAATCAGTGGCTGTCTTaGAGCTATTGTAGTGGTACC +
Preference number: 4 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHNQWLS*SYCSGT
Trigger: GGTACCACTACAATAGCTTCAAGACAGCCACTGATT...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCTCTTCTGCCACACTATaGTGTTTTGTTTTTGACTTG +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVSSATL*CFVFDL
Trigger: CAAGTCAAAAACAAAACATCATAGTGTGGCAGAAGA...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTAATTTACCAGTACCTTaGAAAGAGGATCTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: LASQPARKGNVKESAYPANLPVP*KEDLSK
Trigger: CTTGGAAAGATCCTCTTTTCAAGGTACTGGTAAATT...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTGGTAAGAAAATAAACTaGGGATCAAAGCAACACCAT +
Preference number: 4 (lower is better)
Translates to: PARRHGNNVSDLHTETPPGKKIN*GSKQHH
Trigger: ATGGTGTTGCTTTGATCCTCAGTTTATTTTCTTACC...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACGCAGTCTGTGTCATGTaGTTCTCTAAATGCATGGAG +
Preference number: 4 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHAVCVM*FSKCME
Trigger: CTCCATGCATTTAGAGAATCACATGACACAGACTGC...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGATCACTTCCATCTCTTaGGATGCCAGGTCACTACTG +
Preference number: 4 (lower is better)
Translates to: KGECQGECIPCFFKGPIGITSIS*DARSLL
Trigger: CAGTAGTGACCTGGCATCTCAAGAGATGGAAGTGAT...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCTACCAGAAAAGACTTTaGGGACAATCATTCTACCAT +
Preference number: 4 (lower is better)
Translates to: KECKGRRKTKATGEKTACYQKRL*GQSFYH
Trigger: ATGGTAGAATGATTGTCCTCAAAGTCTTTTCTGGTA...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp AAACTTCAAGGAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTGCCCAGAGCCAAGAATaGAAGGTGTGTGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: KLQGGHLPWCSKFKTDLTAQSQE*KVCAEQ
Trigger: CTGCTCTGCACACACCTTTCATTCTTGGCTCTGGGC...AGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTCCTTGAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR GCA 90 bp GGGAAATACTCAGACTCTTCACCCTCAGAGTCTCCCTCTGCCTCTGGCCTCATGTGGAGCTTTTCTAGCTaGTCTTTTATTACAACCTTG +
Preference number: 4 (lower is better)
Translates to: GKYSDSSPSESPSASGLMWSFSS*SFITTL
Trigger: CAAGGTTGTAATAAAAGAGCAGCTAGAAAAGCTCCA...CATGAGGCCAGAGGCAGAGGGAGACTCTGAGGGTGAAGAGTCTGAGTATTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR GCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCTGGAGCTTTTCTAGCTaGTCTTTTATTACAACCTTG +
Preference number: 4 (lower is better)
Translates to: KECKGRRKTKATGEKTACWSFSS*SFITTL
Trigger: CAAGGTTGTAATAAAAGAGCAGCTAGAAAAGCTCCA...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGACAGGTCCGCCTCTaGCCCCTCCACCTCGTCATC +
Preference number: 4 (lower is better)
Translates to: IYIINPTILCRQSYTYRNRQVRL*PLHLVI
Trigger: GATGACGAGGTGGAGGGGGCAGAGGCGGACCTGTCT...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATCTGGCCTATTCTCCATaGTCGCTCCCGGGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: IYIINPTILCRQSYTYRNLAYSP*SLPGLR
Trigger: ACGCAGGCCCGGGAGCGAGCATGGAGAATAGGCCAG...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCATCTTTTCTTCAATGGTaGCCGCAGTCAGGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSSFLQW*PQSGAC
Trigger: ACAGGCTCCTGACTGCGGGCACCATTGAAGAAAAGA...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGTTGCACTTGTTTCAGTaGTCTGGGATGCATCAGGAC +
Preference number: 4 (lower is better)
Translates to: KGECQGECIPCFFKGPIGLHLFQ*SGMHQD
Trigger: GTCCTGATGCATCCCAGAGCACTGAAACAAGTGCAA...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTAGTTCCTGCAAAAATTaGACTTGTTTCAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLSSCKN*TCFSAL
Trigger: CAGAGCACTGAAACAAGTGCAATTTTTGCAGGAACT...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGTCGATTAGAAGTTACTaGATTTACTTCAGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: ECKGRRKTKATGEKTACQSIRSY*IYFSSF
Trigger: AAAGGAGCTGAAGTAAATGCAGTAACTTCTAATCGA...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCACACTCGGTTGGCTTCTaGCTCCACCAGTACATAATC +
Preference number: 4 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSHSVGF*LHQYII
Trigger: GATTATGTACTGGTGGAGGCAGAAGCCAACCGAGTG...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGGAACACCAGACACTaGTCCCAGACACCGCTGACG +
Preference number: 4 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMGNTRH*SQTPLT
Trigger: CGTCAGCGGTGTCTGGGAGCAGTGTCTGGTGTTCCC...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCGCTCTTCCACTAAAATaGTCAGGGACATTATCTTTT +
Preference number: 4 (lower is better)
Translates to: KECKGRRKTKATGEKTACALPLK*SGTLSF
Trigger: AAAAGATAATGTCCCTGAGCATTTTAGTGGAAGAGC...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCGCTCTTCCACTAAAATaGTCAGGGACATTATCTTTT +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVALPLK*SGTLSF
Trigger: AAAAGATAATGTCCCTGAGCATTTTAGTGGAAGAGC...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCAGTATGATACCCAAATaGTTCATGAGTGAACAAGGT +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVSMIPK*FMSEQG
Trigger: ACCTTGTTCACTCATGAAGCATTTGGGTATCATACT...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTGCTTTTGATAGTATTTaGTACTTGAAGAGGAGGCTA +
Preference number: 4 (lower is better)
Translates to: LASQPARKGNVKESAYPAAFDSI*YLKRRL
Trigger: TAGCCTCCTCTTCAAGTAGCAAATACTATCAAAAGC...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTACCATTCTACTTAACTaGATTGTTCTCCAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLTILLN*IVLQVP
Trigger: AGGGACTTGGAGAACAATGCAGTTAAGTAGAATGGT...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGCTGACAATTTCTTCTaGCAGTTCAAATCTACTATT +
Preference number: 4 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWADNFF*QFKSTI
Trigger: AATAGTAGATTTGAACTGGCAGAAGAAATTGTCAGC...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR CCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATACCCCACAGCAGAGGTaGACAGCCCGTCACCCACAG +
Preference number: 4 (lower is better)
Translates to: IYIINPTILCRQSYTYRNTPQQR*TARHPQ
Trigger: CTGTGGGTGACGGGCTGTCCACCTCTGCTGTGGGGT...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp GCATTCTGTAGTATGATAGGTTTTCTATTTCAGACAGCTAAGAATGCCTTACAGACCCCACAGCAGAGGTaGACAGCCCGTCACCCACAG +
Preference number: 4 (lower is better)
Translates to: AFCSMIGFLFQTAKNALQTPQQR*TARHPQ
Trigger: CTGTGGGTGACGGGCTGTCCACCTCTGCTGTGGGGT...CTGTAAGGCATTCTTAGCTGTCTGAAATAGAAAACCTATCATACTACAGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR CCA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGCCTCCAAGGATGGCCTaGAGATGCTTTTGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: KGECQGECIPCFFKGPIGPPRMA*RCFCFA
Trigger: TGCAAAACAAAAGCATCTCCAGGCCATCCTTGGAGG...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATGCTGCCAAGACTGGATaGCCCCGGCTCTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: IYIINPTILCRQSYTYRNAAKTG*PRLCIL
Trigger: GAGGATGCAGAGCCGGGGCCATCCAGTCTTGGCAGC...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGGTTTTTATTTTGCACTaGGGCTGGAGGCGTGACTGG +
Preference number: 4 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRVFILH*GWRRDW
Trigger: CCAGTCACGCCTCCAGCCCCAGTGCAAAATAAAAAC...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCTTTTGGACAGAACTCTaGCTTTCTTGTTTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVFWTEL*LSCLVC
Trigger: ACAAACCAAACAAGAAAGCCAGAGTTCTGTCCAAAA...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp TGCCACTTGAAGCTGGAGGGGATAAGAAATGCTGGCATCTTGCCCCTCCCTGTGTTTTGGACAGAACTCTaGCTTTCTTGTTTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: CHLKLEGIRNAGILPLPVFWTEL*LSCLVC
Trigger: ACAAACCAAACAAGAAAGCCAGAGTTCTGTCCAAAA...CACAGGGAGGGGCAAGATGCCAGCATTTCTTATCCCCTCCAGCTTCAAGTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR CCA 90 bp ATAATCTTCATCTCCATCATCTCGGTATCTTCCCACTTTCCGACCTCCTCCTCCCTTCCTCCTCCTCTGTaGGGAAATACTCAGACTCTT +
Preference number: 4 (lower is better)
Translates to: IIFISIISVSSHFPTSSSLPPPL*GNTQTL
Trigger: AAGAGTCTGAGTATTTCCCCACAGAGGAGGAGGAAG...GGAGGAGGAGGTCGGAAAGTGGGAAGATACCGAGATGATGGAGATGAAGATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR CCA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACAAGAAGGCAATTATCTaGATGGTCTTGCCCAATCCC +
Preference number: 4 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHKKAII*MVLPNP
Trigger: GGGATTGGGCAAGACCATCCAGATAATTGCCTTCTT...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355832.10
CDS-3UTR CCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCGTAGGTATGGATTTATaGTATCTCGTAAGACACATG +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVVGMDL*YLVRHM
Trigger: CATGTGTCTTACGAGATACCATAAATCCATACCTAC...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGAAGAAACACAAATATaGATGTGTCCTCATTGTATC +
Preference number: 4 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWEETQI*MCPHCI
Trigger: GATACAATGAGGACACATCCATATTTGTGTTTCTTC...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp GTAGTGAGATACAAACAGCCTTGGCTGGAATCCAAACCGCAGAAACAAGAAAGCAGATCTTTTCTTCAATaGTGCCCGCAGTCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: VVRYKQPWLESKPQKQESRSFLQ*CPQSGA
Trigger: GGCTCCTGACTGCGGGCACCATTGAAGAAAAGATCT...GCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGTCTCTTCAGATGATGTaGCATCATTTACAGATATGT +
Preference number: 4 (lower is better)
Translates to: ECKGRRKTKATGEKTACQSLQMM*HHLQIC
Trigger: ACATATCTGTAAATGATGCCACATCATCTGAAGAGA...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp CCTGTGAGGTACCATACCTCTGGACAGGGAGCTGAGGGAGACGGAGCTCTGTTTTCTCTTCAGATGATGTaGCATCATTTACAGATATGT +
Preference number: 4 (lower is better)
Translates to: PVRYHTSGQGAEGDGALFSLQMM*HHLQIC
Trigger: ACATATCTGTAAATGATGCCACATCATCTGAAGAGA...AAACAGAGCTCCGTCTCCCTCAGCTCCCTGTCCAGAGGTATGGTACCTCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR CCA 90 bp TTTGTCGGTGGTAGATCTTTTCTTCAATGGTGCCCGCAGTCAGGAGCCTGTACATTCATGATGCCATCCTaGCACTTCTCTGTTGGAGAT +
Preference number: 4 (lower is better)
Translates to: FVGGRSFLQWCPQSGACTFMMPS*HFSVGD
Trigger: ATCTCCAACAGAGAAGTGCCAGGATGGCATCATGAA...TGTACAGGCTCCTGACTGCGGGCACCATTGAAGAAAAGATCTACCACCGACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR CCA 90 bp TTAGCAGTATTCTGGCTTGAGTTTCCAAATTCCTTCACCACCAGAAGTTCTATGGGTCATCGTGTTCTGTaGTGGGCAGCAGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LAVFWLEFPNSFTTRSSMGHRVL*WAAGQK
Trigger: CTTCTGCCCTGCTGCCCACCACAGAACACGATGACC...CATAGAACTTCTGGTGGTGAAGGAATTTGGAAACTCAAGCCAGAATACTGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR CCA 90 bp GTAGTGAGATACAAACAGCCTTGGCTGGAATCCAAACCGCAGAAACAAGAAAGCCCATCAGTGTGGGCCTaGAAAGCGATGAAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: VVRYKQPWLESKPQKQESPSVWA*KAMKFL
Trigger: GAGAAACTTCATCGCTTTCCAGGCCCACACTGATGG...GCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTCCTGACCTTTGTGGGTaGCAAATGGTAAATATAAAT +
Preference number: 4 (lower is better)
Translates to: LASQPARKGNVKESAYPAPDLCG*QMVNIN
Trigger: ATTTATATTTACCATTTGCCACCCACAAAGGTCAGG...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGCAGACAAGAGAGGCCTaGAGTGGTGTCACTTCATGG +
Preference number: 4 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRQTREA*SGVTSW
Trigger: CCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTG...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp GTAGTGAGATACAAACAGCCTTGGCTGGAATCCAAACCGCAGAAACAAGAAAGCGGGGATTCCCTCATTTaGCATTCTCTACAGACCAGG +
Preference number: 4 (lower is better)
Translates to: VVRYKQPWLESKPQKQESGDSLI*HSLQTR
Trigger: CCTGGTCTGTAGAGAATGCCAAATGAGGGAATCCCC...GCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR CCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGGGAGCTCTGTTTTCTTaGCTGCACCCACTGAAATGG +
Preference number: 4 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRGALFS*LHPLKW
Trigger: CCATTTCAGTGGGTGCAGCCAAGAAAACAGAGCTCC...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR CCA 90 bp AAACTTCAAGGAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTGTGTTCGAGGCATCTTaGGACTGCATCCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: KLQGGHLPWCSKFKTDLTVFEAS*DCILLQ
Trigger: CTGGAGGAGGATGCAGTCCCAAGATGCCTCGAACAC...AGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTCCTTGAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR TCA 90 bp GAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTGCTCTATTGTCTCCTGAGTTTGACTTaGGTGGGGGATTCCCTCATT +
Preference number: 4 (lower is better)
Translates to: EVTYRGAQNSKQTLLLYCLLSLT*VGDSLI
Trigger: AATGAGGGAATCCCCCACTCAAGTCAAACTCAGGAG...ACAATAGAGCAGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR TCA 90 bp GTAGTGAGATACAAACAGCCTTGGCTGGAATCCAAACCGCAGAAACAAGAAAGCAATCTAGTTTCCTGTTaGTGTCTCTGCTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: VVRYKQPWLESKPQKQESNLVSC*CLCWWQ
Trigger: CTGCCACCAGCAGAGACATCAACAGGAAACTAGATT...GCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCATCCTCCAGACTGGCGTaGTCTAGTTCAATTTTCACC +
Preference number: 4 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSSSRLA*SSSIFT
Trigger: GGTGAAAATTGAACTAGATCACGCCAGTCTGGAGGA...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGGACAGAATGATCCGATaGGGGGTGCGAAACTGTTTG +
Preference number: 4 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRDRMIR*GVRNCL
Trigger: CAAACAGTTTCGCACCCCTCATCGGATCATTCTGTC...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGGTTATTTTGCATCGGTaGGCCAGACAGAATGATCCG +
Preference number: 4 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRVILHR*ARQNDP
Trigger: CGGATCATTCTGTCTGGCTCACCGATGCAAAATAAC...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp TTTGTCGGTGGTAGATCTTTTCTTCAATGGTGCCCGCAGTCAGGAGCCTGTACATGGTACCATCCATCTTaGGATAGGTATACTTTTGGG +
Preference number: 4 (lower is better)
Translates to: FVGGRSFLQWCPQSGACTWYHPS*DRYTFG
Trigger: CCCAAAAGTATACCTATCTCAAGATGGATGGTACCA...TGTACAGGCTCCTGACTGCGGGCACCATTGAAGAAAAGATCTACCACCGACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR TCA 90 bp GTAGTGAGATACAAACAGCCTTGGCTGGAATCCAAACCGCAGAAACAAGAAAGCTGGCATTTGGGTGTCTaGACATCTGATCCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: VVRYKQPWLESKPQKQESWHLGV*TSDPVP
Trigger: AGGAACTGGATCAGATGTTCAGACACCCAAATGCCA...GCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACAGCAGTATTCTGGCTTaGGTTTCCAAATTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHSSILA*VSKFLH
Trigger: GTGAAGGAATTTGGAAACTCAAGCCAGAATACTGCT...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGTCTAACTGTGCTCCCTaGCAGCATCTTTTGGGTAAA +
Preference number: 4 (lower is better)
Translates to: KGECQGECIPCFFKGPIGSNCAP*QHLLGK
Trigger: TTTACCCAAAAGATGCTGTCAGGGAGCACAGTTAGA...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp TGTCTCTTCTCCAAGCCTATCATTGCTAGTTACATTACTACTCATGTGAGGGTCCAGAACCCTCCTCTCTaGGTCACATGGATGAGCAGA +
Preference number: 4 (lower is better)
Translates to: CLFSKPIIASYITTHVRVQNPPL*VTWMSR
Trigger: TCTGCTCATCCATGTGACTCAGAGAGGAGGGTTCTG...GACCCTCACATGAGTAGTAATGTAACTAGCAATGATAGGCTTGGAGAAGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR TCA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACGGAAGAATGGGAAAATaGCATTATAGCAGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHGRMGK*HYSSSL
Trigger: CAGACTGCTGCTATAATGTCATTTTCCCATTCTTCC...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp GAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTGCTCTATTGTTATCTCAGGAGGTGGTaGCACCTGCTATTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: EVTYRGAQNSKQTLLLYCYLRRW*HLLFSV
Trigger: CACACTGAATAGCAGGTGTCACCACCTCCTGAGATA...ACAATAGAGCAGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR GCA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGTCCACACCCAAACCCTaGAGCTCAAGGGCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: ETFPYIICKLVKVALYIRSTPKP*SSRAWA
Trigger: CGCCCAGGCCCTTGAGCTGCAGGGTTTGGGTGTGGA...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGTCTTTTCTTCAATGGTaGCCGCAGTCAGGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRSFLQW*PQSGAC
Trigger: ACAGGCTCCTGACTGCGGGCACCATTGAAGAAAAGA...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGTTGCACTTGTTTCAGTaGTCTGGGATGCATCAGGAC +
Preference number: 4 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRLHLFQ*SGMHQD
Trigger: GTCCTGATGCATCCCAGAGCACTGAAACAAGTGCAA...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCGATTAGAAGTTACTaGATTTACTTCAGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LASQPARKGNVKESAYPASIRSY*IYFSSF
Trigger: AAAGGAGCTGAAGTAAATGCAGTAACTTCTAATCGA...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACCAGGGTCTCTTCTTCTaGCACACTATGATGTTTTGT +
Preference number: 4 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHQGLFF*HTMMFC
Trigger: ACAAAACATCATAGTGTGGCAGAAGAAGAGACCCTG...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGACGAGAGAGCCTCAGTaGTTTCAGGGCATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLTREPQ*FQGILG
Trigger: GCCCAGGATGCCCTGAAAGCACTGAGGCTCTCTCGT...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCAGAAGCTTCCTGCAGGTaGCCGCTTTCACTTTCTAAA +
Preference number: 4 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSEASCR*PLSLSK
Trigger: TTTAGAAAGTGAAAGCGGGCACCTGCAGGAAGCTTC...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp ATCATTGCTAGTTACATTACTACTCATGTGAGGGTCATCTTTCAAAGGATCACTGACAGCCTGCCAGCCTaGAGACAAGAGAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: IIASYITTHVRVIFQRITDSLPA*RQERPG
Trigger: TCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTC...AGTGATCCTTTGAAAGATGACCCTCACATGAGTAGTAATGTAACTAGCAATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR GCA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTATCCAAGAAACAAACTaGACTAAGACAGCTAAGAAG +
Preference number: 4 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLIQETN*TKTAKK
Trigger: CTTCTTAGCTGTCTTAGTGCAGTTTGTTTCTTGGAT...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGACCCCACAGCAGAGGTaGACAGCCCGTCACCCACAG +
Preference number: 4 (lower is better)
Translates to: ETFPYIICKLVKVALYIRTPQQR*TARHPQ
Trigger: CTGTGGGTGACGGGCTGTCCACCTCTGCTGTGGGGT...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp GCATTCTGTAGTATGATAGGTTTTCTATTTCAGACAGCTAAGAATGCCTTACAGGCACGGCTGGCCTCATaGATGGCATTGTCCACCTGC +
Preference number: 4 (lower is better)
Translates to: AFCSMIGFLFQTAKNALQARLAS*MALSTC
Trigger: GCAGGTGGACAATGCCATCCATGAGGCCAGCCGTGC...CTGTAAGGCATTCTTAGCTGTCTGAAATAGAAAACCTATCATACTACAGAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR CCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATGCTGGGAGGCACGGCTaGCCTCATGGATGGCATTGT +
Preference number: 4 (lower is better)
Translates to: IYIINPTILCRQSYTYRNAGRHG*PHGWHC
Trigger: ACAATGCCATCCATGAGGCCAGCCGTGCCTCCCAGC...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp GAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTGCTCTATTGTCTGCTCCTCCAAGGATaGCCTGGAGATGCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: EVTYRGAQNSKQTLLLYCLLLQG*PGDAFV
Trigger: AACAAAAGCATCTCCAGGCCATCCTTGGAGGAGCAG...ACAATAGAGCAGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR CCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATGCATGCTGCCAAGACTaGATGGCCCCGGCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: IYIINPTILCRQSYTYRNACCQD*MAPALH
Trigger: ATGCAGAGCCGGGGCCATCCAGTCTTGGCAGCATGC...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATGGCTGGAGGCGTGACTaGGGCTGGAGCTTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: IYIINPTILCRQSYTYRNGWRRD*GWSFSS
Trigger: GCTAGAAAAGCTCCAGCCCCAGTCACGCCTCCAGCC...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGGTTTTTATTTTGCACTaGGGCTGGAGGCGTGACTGG +
Preference number: 4 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRVFILH*GWRRDW
Trigger: CCAGTCACGCCTCCAGCCCCAGTGCAAAATAAAAAC...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGCTTCCTCCTCCTCTGTaGGGAAATACTCAGACTCTT +
Preference number: 4 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRLPPPL*GNTQTL
Trigger: AAGAGTCTGAGTATTTCCCCACAGAGGAGGAGGAAG...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGGTCACTTGCTTCTTCTaGCCTATTCTCCATGCTCGC +
Preference number: 4 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRVTCFF*PILHAR
Trigger: GCGAGCATGGAGAATAGGCCAGAAGAAGCAAGTGAC...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCACGTTTTGGAACATCATaGTCTGCTCCAAAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSRFGTS*SAPKAG
Trigger: ACCAGCCTTTGGAGCAGACCATGATGTTCCAAAACG...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATCCTGGGCCACTCGGTTaGCTTCTGCCTCCACCAGTA +
Preference number: 4 (lower is better)
Translates to: IYIINPTILCRQSYTYRNPGPLG*LLPPPV
Trigger: TACTGGTGGAGGCAGAAGCCAACCGAGTGGCCCAGG...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGCCAGAAATCCCCCTGTaGCCAGTCCAGGTGGGAACA +
Preference number: 4 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMPEIPL*PVQVGT
Trigger: TGTTCCCACCTGGACTGGCCACAGGGGGATTTCTGG...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp ATCATTGCTAGTTACATTACTACTCATGTGAGGGTCATCTTTCAAAGGATCACTGTATCTCCCTGGTGCTaGCCTGGCCATCAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: IIASYITTHVRVIFQRITVSPWC*PGHQCG
Trigger: CCCACACTGATGGCCAGGCCAGCACCAGGGAGATAC...AGTGATCCTTTGAAAGATGACCCTCACATGAGTAGTAATGTAACTAGCAATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR CCA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTGTGCATGCATGTGTGTaGTTTTTATGTACCTACTTT +
Preference number: 4 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLVHACV*FLCTYF
Trigger: AAAGTAGGTACATAAAAACCACACACATGCATGCAC...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGCATGGTAACAACGGCTaGGTCTGCTGTGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMHGNNG*VCCGLQ
Trigger: CTGCAGCCCACAGCAGACCCAGCCGTTGTTACCATG...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp GTAGTGAGATACAAACAGCCTTGGCTGGAATCCAAACCGCAGAAACAAGAAAGCAAGAGAGGCCTGGAGTaGTGTCACTTCATGGTAACA +
Preference number: 4 (lower is better)
Translates to: VVRYKQPWLESKPQKQESKRGLE*CHFMVT
Trigger: TGTTACCATGAAGTGACACCACTCCAGGCCTCTCTT...GCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACGATACCACTTACTGTTaGCAAGGGTTTGGAGAAATG +
Preference number: 4 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHDTTYC*QGFGEM
Trigger: CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATC...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTGTAGAGATCTACAAATaGCCAATAAACATGGAAATG +
Preference number: 4 (lower is better)
Translates to: PARRHGNNVSDLHTETPPVEIYK*PINMEM
Trigger: CATTTCCATGTTTATTGGCCATTTGTAGATCTCTAC...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCGTAGAGATCTACAAATaGCCAATAAACATGGAAATG +
Preference number: 4 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVVEIYK*PINMEM
Trigger: CATTTCCATGTTTATTGGCCATTTGTAGATCTCTAC...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp GAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTGCTCTATTGTAATCTAGTTTCCTGTTaGTGTCTCTGCTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: EVTYRGAQNSKQTLLLYCNLVSC*CLCWWQ
Trigger: CTGCCACCAGCAGAGACATCAACAGGAAACTAGATT...ACAATAGAGCAGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR TCA 90 bp GAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTGCTCTATTGTTCCTCCAGACTGGCGTaGTCTAGTTCAATTTTCACC +
Preference number: 4 (lower is better)
Translates to: EVTYRGAQNSKQTLLLYCSSRLA*SSSIFT
Trigger: GGTGAAAATTGAACTAGATCACGCCAGTCTGGAGGA...ACAATAGAGCAGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR TCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATCTCTGGCCTCATGTCTaGCTCCCAAGGTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: IYIINPTILCRQSYTYRNLWPHV*LPRSPC
Trigger: GCAAGGAGACCTTGGGAGTCAGACATGAGGCCAGAG...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGTAGAATTGCCACTCTaGACGGAGGCCACCACGTGT +
Preference number: 4 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMVELPL*TEATTC
Trigger: ACACGTGGTGGCCTCCGTTCAGAGTGGCAATTCTAC...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp GTAGTGAGATACAAACAGCCTTGGCTGGAATCCAAACCGCAGAAACAAGAAAGCGCTCCAAAGGCTGGTTaGATCCTTCTTTTTAGATGG +
Preference number: 4 (lower is better)
Translates to: VVRYKQPWLESKPQKQESAPKAG*ILLFRW
Trigger: CCATCTAAAAAGAAGGATTCAACCAGCCTTTGGAGC...GCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGAGCAGTATTCTGGCTTaGGTTTCCAAATTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: KGECQGECIPCFFKGPIGSSILA*VSKFLH
Trigger: GTGAAGGAATTTGGAAACTCAAGCCAGAATACTGCT...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCAAAAGCCAGGGTAAACTaGATACCCTACAGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSKARVN*IPYSFP
Trigger: TGGAAAGCTGTAGGGTATTCAGTTTACCCTGGCTTT...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGCAAATGCTTCATGAGTaGACAAGGTCAGCAGATCAC +
Preference number: 4 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRQMLHE*TRSADH
Trigger: GTGATCTGCTGACCTTGTTCACTCATGAAGCATTTG...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACTCCTTTTATGGAGGGTaGATTGATGCAAGCAATTCT +
Preference number: 4 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHSFYGG*IDASNS
Trigger: AGAATTGCTTGCATCAATTCACCCTCCATAAAAGGA...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGATAGATGTGAATGACTaGAGAACCTCCTGCATCTCT +
Preference number: 4 (lower is better)
Translates to: KGECQGECIPCFFKGPIGIDVND*RTSCIS
Trigger: AGAGATGCAGGAGGTTCTTCAGTCATTCACATCTAT...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR GCA 90 bp TGTCTCTTCTCCAAGCCTATCATTGCTAGTTACATTACTACTCATGTGAGGGTCTCTTTTCTTCAATGGTaGCCGCAGTCAGGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: CLFSKPIIASYITTHVRVSFLQW*PQSGAC
Trigger: ACAGGCTCCTGACTGCGGGCACCATTGAAGAAAAGA...GACCCTCACATGAGTAGTAATGTAACTAGCAATGATAGGCTTGGAGAAGAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR GCA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGGAAGCTTCCTGCAGGTaGCCGCTTTCACTTTCTAAA +
Preference number: 4 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWREASCR*PLSLSK
Trigger: TTTAGAAAGTGAAAGCGGGCACCTGCAGGAAGCTTC...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGAGAGAAGACAGCCTaGCAGCCTGCAGACAAGAGA +
Preference number: 4 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMGEKTA*QPADKR
Trigger: TCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCTCTCC...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp GAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTGCTCTATTGTCCTCCAAGGATGGCCTaGAGATGCTTTTGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: EVTYRGAQNSKQTLLLYCPPRMA*RCFCFA
Trigger: TGCAAAACAAAAGCATCTCCAGGCCATCCTTGGAGG...ACAATAGAGCAGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR CCA 90 bp TTGGGAAAAAGTCATCATCAATCTCCTGCACTGGCACTTTCTTCTGCCGTTTCCCATCCTCCTCCAGACTaGCGTGATCTAGTTCAATTT +
Preference number: 4 (lower is better)
Translates to: LGKSHHQSPALALSSAVSHPPPD*RDLVQF
Trigger: AAATTGAACTAGATCACGCCAGTCTGGAGGAGGATG...GGAAACGGCAGAAGAAAGTGCCAGTGCAGGAGATTGATGATGACTTTTTCCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR CCA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCACTGTTTGAGCCTGGCTaGGTCTTTCTCTTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSLFEPG*VFLFCK
Trigger: CTTACAAAAGAGAAAGACCCAGCCAGGCTCAAACAG...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATGCTTTCAGGGCATCCTaGGCCACTCGGTTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: IYIINPTILCRQSYTYRNAFRAS*ATRLAS
Trigger: AGAAGCCAACCGAGTGGCCCAGGATGCCCTGAAAGC...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGGGAACAGGTGCAAGATaGTGTGGGGGTGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: ETFPYIICKLVKVALYIRGTGAR*CGGGEA
Trigger: TGCCTCCCCACCCCCACACCATCTTGCACCTGTTCC...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp GTAGTGAGATACAAACAGCCTTGGCTGGAATCCAAACCGCAGAAACAAGAAAGCAAGGGTTTGGAGAAATaGGTCCTTTTATGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: VVRYKQPWLESKPQKQESKGLEK*VLLWRV
Trigger: CACCCTCCATAAAAGGACCCATTTCTCCAAACCCTT...GCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGCTGTTGGCAAGGGTTTaGAGAAATGGGTCCTTTTAT +
Preference number: 4 (lower is better)
Translates to: KGECQGECIPCFFKGPIGLLARV*RNGSFY
Trigger: ATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAG...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp GCATTCTGTAGTATGATAGGTTTTCTATTTCAGACAGCTAAGAATGCCTTACAGTCTACTGCCTGGATCTaGTGTCGGTCGATGTGCAGC +
Preference number: 4 (lower is better)
Translates to: AFCSMIGFLFQTAKNALQSTAWI*CRSMCS
Trigger: GCTGCACATCGACCGACATCAGATCCAGGCAGTAGA...CTGTAAGGCATTCTTAGCTGTCTGAAATAGAAAACCTATCATACTACAGAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR TCA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGGCATTGTCCACCTGCTaGAGCACTCCCTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: ETFPYIICKLVKVALYIRALSTC*STPCSS
Trigger: GCTGGAACAGGGAGTGCTTCAGCAGGTGGACAATGC...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATATGTCGTACATGACGTaGGGTCATCCAGGACCGACC +
Preference number: 4 (lower is better)
Translates to: IYIINPTILCRQSYTYRNMSYMT*GHPGPT
Trigger: GGTCGGTCCTGGATGACCTCACGTCATGTACGACAT...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGCTGCTGGTGGCAGCTTaGGGGCTAAGCTGTTCAATA +
Preference number: 4 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMLLVAA*GLSCSI
Trigger: TATTGAACAGCTTAGCCCTCAAGCTGCCACCAGCAG...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp TTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGGAAACTCTGGCCTCATGTCTaGCTCCCAAGGTCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: FPYIICKLVKVALYIRRKLWPHV*LPRSPC
Trigger: GCAAGGAGACCTTGGGAGTCAGACATGAGGCCAGAG...TTTCCTCCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp TTTGTCGGTGGTAGATCTTTTCTTCAATGGTGCCCGCAGTCAGGAGCCTGTACATCTTCTGCCACACTATaGTGTTTTGTTTTTGACTTG +
Preference number: 4 (lower is better)
Translates to: FVGGRSFLQWCPQSGACTSSATL*CFVFDL
Trigger: CAAGTCAAAAACAAAACATCATAGTGTGGCAGAAGA...TGTACAGGCTCCTGACTGCGGGCACCATTGAAGAAAAGATCTACCACCGACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR TCA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGACAACCTATCGATATTaGTACCACTTACTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: KGECQGECIPCFFKGPIGTTYRY*YHLLLA
Trigger: TGCCAACAGTAAGTGGTATCAATATCGATAGGTTGT...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGCCAAGTATAAGACACTaGAGAGGGGGAGAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRPSIRH*RGGERK
Trigger: TTTCCTTTCTCCCCCTCTTCAGTGTCTTATACTTGG...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGAGGATGGCCTGGAGATaGTTTTGTTTTGCAGTGATC +
Preference number: 4 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRRMAWR*FCFAVI
Trigger: GATCACTGCAAAACAAAAGCATCTCCAGGCCATCCT...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp AAACTTCAAGGAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTTTCAATTTTCACCTCTaGTCCTCCAAGGATGGCCTG +
Preference number: 4 (lower is better)
Translates to: KLQGGHLPWCSKFKTDLTFNFHL*SSKDGL
Trigger: CAGGCCATCCTTGGAGGAGCAGAGGTGAAAATTGAA...AGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTCCTTGAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR GCA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGTGGAGTTTCTTGATGTaGTTTTTCAAACGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: KGECQGECIPCFFKGPIGWSFLM*FFKRSS
Trigger: AGAGGAGCGTTTGAAAAAGCACATCAAGAAACTCCA...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGACTGGCACTTTCTTCTaGCGTTTCCCGCCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: ETFPYIICKLVKVALYIRTGTFF*RFPPLG
Trigger: GCCCAAGGGCGGGAAACGGCAGAAGAAAGTGCCAGT...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGCTGTACACAGTCACTTaGTTCTTCTGGCCTATTCTC +
Preference number: 4 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRLYTVT*FFWPIL
Trigger: GAGAATAGGCCAGAAGAAGCAAGTGACTGTGTACAG...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCAAAACATAATCGTCATTaGTCTGTTCCTTGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSKHNRH*SVPWPH
Trigger: GTGAGGCCAAGGAACAGAGCAATGACGATTATGTTT...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp TTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGGAAAACGAGAGAGCCTCAGTaGTTTCAGGGCATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: FPYIICKLVKVALYIRRKTREPQ*FQGILG
Trigger: GCCCAGGATGCCCTGAAAGCACTGAGGCTCTCTCGT...TTTCCTCCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp TTTGTCGGTGGTAGATCTTTTCTTCAATGGTGCCCGCAGTCAGGAGCCTGTACAGCTTTTGATAGTATTTaGTACTTGAAGAGGAGGCTA +
Preference number: 4 (lower is better)
Translates to: FVGGRSFLQWCPQSGACTAFDSI*YLKRRL
Trigger: TAGCCTCCTCTTCAAGTAGCAAATACTATCAAAAGC...TGTACAGGCTCCTGACTGCGGGCACCATTGAAGAAAAGATCTACCACCGACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR GCA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGGGAGAGTGCATACCCTaGTTCTTTAAAGGGCCAATT +
Preference number: 4 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRGECIP*FFKGPI
Trigger: AATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCC...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACTTTTTAGATGGCATTTaGGTGTCTGAACATCTGATC +
Preference number: 4 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHFLDGI*VSEHLI
Trigger: GATCAGATGTTCAGACACCCAAATGCCATCTAAAAA...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp GTAGTGAGATACAAACAGCCTTGGCTGGAATCCAAACCGCAGAAACAAGAAAGCGCTTTCATCACCAGATaGCATAGAAGTTTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: VVRYKQPWLESKPQKQESAFITR*HRSFAC
Trigger: ACAGGCAAAACTTCTATGCCATCTGGTGATGAAAGC...GCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCACTTAGGCTTTTGCTTTaGTCTCAGATGTTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSLRLLL*SQMFLQ
Trigger: CTGGAGAAACATCTGAGACCAAAGCAAAAGCCTAAG...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGTTTCTTCACCAGGTGTaGAATTCGAGTTCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: KGECQGECIPCFFKGPIGFLHQV*NSSSFK
Trigger: TTTGAAGGAACTCGAATTCCACACCTGGTGAAGAAA...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp TTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGGAAACATGGTAACAACGGCTaGGTCTGCTGTGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: FPYIICKLVKVALYIRRKHGNNG*VCCGLQ
Trigger: CTGCAGCCCACAGCAGACCCAGCCGTTGTTACCATG...TTTCCTCCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp GAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTGCTCTATTGTGGAGGTCACCTACCGTaGTGCTCAAAATTCAAAACA +
Preference number: 4 (lower is better)
Translates to: EVTYRGAQNSKQTLLLYCGGHLP*CSKFKT
Trigger: TGTTTTGAATTTTGAGCACCACGGTAGGTGACCTCC...ACAATAGAGCAGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000680107.1
3UTR CAA 72 bp CACAAACACATAAACAGTAGTGAGATACAAACAGCCTaGGCTGGAATCCAAACCGCAGAAACAAGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: HKHINSSEIQTA*AGIQTAETRKP
Trigger: GGGCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTACTGTTTATGTGTTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR CAA 72 bp TTCTCTGTATTGTTAAAACCATTCTACTTAACTGCATaGTTCTCCAAGTCCCTCCAGCCAGGAGGCACGGTA +
Preference number: 4 (lower is better)
Translates to: FSVLLKPFYLTA*FSKSLQPGGTV
Trigger: TACCGTGCCTCCTGGCTGGAGGGACTTGGAGAACAATGCAGTTAAGTAGAATGGTTTTAACAATACAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR CAA 72 bp TCTTCTAGTTCATCATCAGGAAGACCTTTGAGATTCTaGGGACCTCCAGAAAAGAGATCAGGGTGGTTGCAA +
Preference number: 4 (lower is better)
Translates to: SSSSSSGRPLRF*GPPEKRSGWLQ
Trigger: TTGCAACCACCCTGATCTCTTTTCTGGAGGTCCCAAGAATCTCAAAGGTCTTCCTGATGATGAACTAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
3UTR CAA 72 bp TTCTTCACCAGGTGTGGAATTCGAGTTCCTTCAAACTaGGCGTCTCTGCAATGCTTAGAGTTCTTAGGCTTT +
Preference number: 4 (lower is better)
Translates to: FFTRCGIRVPSN*ASLQCLEFLGF
Trigger: AAAGCCTAAGAACTCTAAGCATTGCAGAGACGCCAAGTTTGAAGGAACTCGAATTCCACACCTGGTGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR TCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGCTCCTGAGTTTGACTTaGGTGGGGGATTCCCTCATT +
Preference number: 4 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMLLSLT*VGDSLI
Trigger: AATGAGGGAATCCCCCACTCAAGTCAAACTCAGGAG...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp GTAGTGAGATACAAACAGCCTTGGCTGGAATCCAAACCGCAGAAACAAGAAAGCTTATTACTGACAGGTTaGCTCTGTAAACAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: VVRYKQPWLESKPQKQESLLLTG*LCKQSC
Trigger: GCAAGACTGTTTACAGAGTCAACCTGTCAGTAATAA...GCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp TTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGGAAAATGTCGTACATGACGTaGGGTCATCCAGGACCGACC +
Preference number: 4 (lower is better)
Translates to: FPYIICKLVKVALYIRRKMSYMT*GHPGPT
Trigger: GGTCGGTCCTGGATGACCTCACGTCATGTACGACAT...TTTCCTCCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp ATAATCTTCATCTCCATCATCTCGGTATCTTCCCACTTTCCGACCTCCTCCTCCATACTTTTCGAAGCCTaGTGCTTCATTAAGCATGAT +
Preference number: 4 (lower is better)
Translates to: IIFISIISVSSHFPTSSSILFEA*CFIKHD
Trigger: ATCATGCTTAATGAAGCATCAGGCTTCGAAAAGTAT...GGAGGAGGAGGTCGGAAAGTGGGAAGATACCGAGATGATGGAGATGAAGATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR TCA 90 bp TTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGGAAAGTAGAATTGCCACTCTaGACGGAGGCCACCACGTGT +
Preference number: 4 (lower is better)
Translates to: FPYIICKLVKVALYIRRKVELPL*TEATTC
Trigger: ACACGTGGTGGCCTCCGTTCAGAGTGGCAATTCTAC...TTTCCTCCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp TTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGGAAAGTGAGCCAGACAGAATaGTCCGATGAGGGGTGCGAA +
Preference number: 4 (lower is better)
Translates to: FPYIICKLVKVALYIRRKVSQTE*SDEGCE
Trigger: TTCGCACCCCTCATCGGATCATTCTGTCTGGCTCAC...TTTCCTCCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp TTAGCAGTATTCTGGCTTGAGTTTCCAAATTCCTTCACCACCAGAAGTTCTATGAACAGCAATACTCGCTaGCCCTGCTTGTGCCATATT +
Preference number: 4 (lower is better)
Translates to: LAVFWLEFPNSFTTRSSMNSNTR*PCLCHI
Trigger: AATATGGCACAAGCAGGGTCAGCGAGTATTGCTGTT...CATAGAACTTCTGGTGGTGAAGGAATTTGGAAACTCAAGCCAGAATACTGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR TCA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGTGGTACCATCCATCTTaGGATAGGTATACTTTTGGG +
Preference number: 4 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRWYHPS*DRYTFG
Trigger: CCCAAAAGTATACCTATCTCAAGATGGATGGTACCA...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp GTAGTGAGATACAAACAGCCTTGGCTGGAATCCAAACCGCAGAAACAAGAAAGCTTGTCAAAAACTGCTTaGAGATTTGTCGGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: VVRYKQPWLESKPQKQESLSKTA*RFVGGR
Trigger: TCTACCACCGACAAATCTTCAAGCAGTTTTTGACAA...GCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCAACATTACTACTCATGTaGGGGTCATCTTTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSTLLLM*GSSFKG
Trigger: TCCTTTGAAAGATGACCCTCACATGAGTAGTAATGT...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp TTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGGAAATGGCATCGTGCTTCATaGCACTGTGCACGCCAACTG +
Preference number: 4 (lower is better)
Translates to: FPYIICKLVKVALYIRRKWHRAS*HCARQL
Trigger: CAGTTGGCGTGCACAGTGTCATGAAGCACGATGCCA...TTTCCTCCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp TCTTCTTCTAGTTCATCATCAGGAAGACCTTTGAGATTCTTGGGACCTCCAGAAAAAGCCAGGGTAAACTaGATACCCTACAGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: SSSSSSSGRPLRFLGPPEKARVN*IPYSFP
Trigger: TGGAAAGCTGTAGGGTATTCAGTTTACCCTGGCTTT...TTCTGGAGGTCCCAAGAATCTCAAAGGTCTTCCTGATGATGAACTAGAAGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR TCA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGGGTAAGAAAATAAACTaGGGATCAAAGCAACACCAT +
Preference number: 4 (lower is better)
Translates to: KGECQGECIPCFFKGPIGGKKIN*GSKQHH
Trigger: ATGGTGTTGCTTTGATCCTCAGTTTATTTTCTTACC...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp TGTCTCTTCTCCAAGCCTATCATTGCTAGTTACATTACTACTCATGTGAGGGTCCCAAGTATAAGACACTaGAGAGGGGGAGAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: CLFSKPIIASYITTHVRVPSIRH*RGGERK
Trigger: TTTCCTTTCTCCCCCTCTTCAGTGTCTTATACTTGG...GACCCTCACATGAGTAGTAATGTAACTAGCAATGATAGGCTTGGAGAAGAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR TCA 90 bp AACTGCAAAGCCCTCTTCTGGAGTTTCTTGATGTGCTTTTTCAAACGCTCCTCTACCTGCTATTCAGTGTaGTATTCAACGGAACACTTC +
Preference number: 4 (lower is better)
Translates to: NCKALFWSFLMCFFKRSSTCYSV*YSTEHF
Trigger: GAAGTGTTCCGTTGAATATCACACTGAATAGCAGGT...AGAGGAGCGTTTGAAAAAGCACATCAAGAAACTCCAGAAGAGGGCTTTGCAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR GCA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCACACCTAACACCTGTCTaGTGGTACTTAAAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSHLTPV*WYLKSF
Trigger: AAAGCTTTTTAAGTACCAGCAGACAGGTGTTAGGTG...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355832.10
CDS-3UTR GCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATGATGACAACTCTGTTTaGCCCCGTCAGGTTGACACC +
Preference number: 4 (lower is better)
Translates to: IYIINPTILCRQSYTYRNDDNSV*PRQVDT
Trigger: GGTGTCAACCTGACGGGGGCAAACAGAGTTGTCATC...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCAGAGTTCTTAGGCTTTTaGTTTGGTCTCAGATGTTTC +
Preference number: 4 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSEFLGF*FGLRCF
Trigger: GAAACATCTGAGACCAAAGCAAAAGCCTAAGAACTC...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGAAACATAATCGTCATTaGTCTGTTCCTTGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRKHNRH*SVPWPH
Trigger: GTGAGGCCAAGGAACAGAGCAATGACGATTATGTTT...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGCACTCGGTTGGCTTCTaGCTCCACCAGTACATAATC +
Preference number: 4 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMHSVGF*LHQYII
Trigger: GATTATGTACTGGTGGAGGCAGAAGCCAACCGAGTG...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp TTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGGAAAAGGGCAGAAGCTTCCTaGAGGTGCCCGCTTTCACTT +
Preference number: 4 (lower is better)
Translates to: FPYIICKLVKVALYIRRKRAEAS*RCPLSL
Trigger: AAGTGAAAGCGGGCACCTGCAGGAAGCTTCTGCCCT...TTTCCTCCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGGCTTTTGATAGTATTTaGTACTTGAAGAGGAGGCTA +
Preference number: 4 (lower is better)
Translates to: KGECQGECIPCFFKGPIGAFDSI*YLKRRL
Trigger: TAGCCTCCTCTTCAAGTAGCAAATACTATCAAAAGC...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGACCATTCTACTTAACTaGATTGTTCTCCAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRTILLN*IVLQVP
Trigger: AGGGACTTGGAGAACAATGCAGTTAAGTAGAATGGT...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp GTAGTGAGATACAAACAGCCTTGGCTGGAATCCAAACCGCAGAAACAAGAAAGCGGGGAGGCAGACTATTaGTTGAACATTTTTAATGGT +
Preference number: 4 (lower is better)
Translates to: VVRYKQPWLESKPQKQESGEADY*LNIFNG
Trigger: ACCATTAAAAATGTTCAAGCAATAGTCTGCCTCCCC...GCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGGGGGAGGCAGACTATTaGTTGAACATTTTTAATGGT +
Preference number: 4 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRGEADY*LNIFNG
Trigger: ACCATTAAAAATGTTCAAGCAATAGTCTGCCTCCCC...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCAGGGGAGGCAGACTATTaGTTGAACATTTTTAATGGT +
Preference number: 4 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSGEADY*LNIFNG
Trigger: ACCATTAAAAATGTTCAAGCAATAGTCTGCCTCCCC...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACGAAGAAACACAAATATaGATGTGTCCTCATTGTATC +
Preference number: 4 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHEETQI*MCPHCI
Trigger: GATACAATGAGGACACATCCATATTTGTGTTTCTTC...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGGTCACTTGCTTCTTCTaGCCTATTCTCCATGCTCGC +
Preference number: 4 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLVTCFF*PILHAR
Trigger: GCGAGCATGGAGAATAGGCCAGAAGAAGCAAGTGAC...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGGTGATGCAGATAACTTaGATTCAAACTCCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRVMQIT*IQTPAV
Trigger: TACTGCAGGAGTTTGAATCCAAGTTATCTGCATCAC...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGTGTTTAGCAGTATTCTaGCTTGAGTTTCCAAATTCC +
Preference number: 4 (lower is better)
Translates to: KGECQGECIPCFFKGPIGCLAVF*LEFPNS
Trigger: GGAATTTGGAAACTCAAGCCAGAATACTGCTAAACA...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGCCTGACAGCATCTTTTaGGTAAAGGAACAAATGTGC +
Preference number: 4 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRPDSIF*VKEQMC
Trigger: GCACATTTGTTCCTTTACCCAAAAGATGCTGTCAGG...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGAGAGCAGTTCAAGACTaGCAGGCCAACTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLRAVQD*QANFSF
Trigger: GAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCT...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR CAA 72 bp GGGTTTGGAGAAATGGGTCCTTTTATGGAGGGTGAATaGATGCAAGCAATTCTGCTACATCCACTGACATTT +
Preference number: 4 (lower is better)
Translates to: GFGEMGPFMEGE*MQAILLHPLTF
Trigger: AAATGTCAGTGGATGTAGCAGAATTGCTTGCATCAATTCACCCTCCATAAAAGGACCCATTTCTCCAAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR CAA 72 bp GCATCATTTACAGATATGTTAGAAGCAGGGAACTTCTaGCGTTTTGGAACATCATGGTCTGCTCCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: ASFTDMLEAGNF*RFGTSWSAPKA
Trigger: AGCCTTTGGAGCAGACCATGATGTTCCAAAACGCAAGAAGTTCCCTGCTTCTAACATATCTGTAAATGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR TCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGAACAGCAATACTCGCTaGCCCTGCTTGTGCCATATT +
Preference number: 4 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLNSNTR*PCLCHI
Trigger: AATATGGCACAAGCAGGGTCAGCGAGTATTGCTGTT...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGAGCATCTGCCTTGACTaGGAAAACAGCAATACTCGC +
Preference number: 4 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLSICLD*ENSNTR
Trigger: GCGAGTATTGCTGTTTTCTCAGTCAAGGCAGATGCT...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCAAGAGATCATTGGATTTaGAAAACCGCCTTTGTTTTG +
Preference number: 4 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSRDHWI*KTAFVL
Trigger: CAAAACAAAGGCGGTTTTTCAAATCCAATGATCTCT...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGTGGCATTTGGGTGTCTaGACATCTGATCCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLWHLGV*TSDPVP
Trigger: AGGAACTGGATCAGATGTTCAGACACCCAAATGCCA...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGCAAAAAGCTTCTGTTTaGGCCTGGCTGGGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMQKASV*AWLGLS
Trigger: AGAAAGACCCAGCCAGGCTCAAACAGAAGCTTTTTG...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp GTAGTGAGATACAAACAGCCTTGGCTGGAATCCAAACCGCAGAAACAAGAAAGCGGTAAGAAAATAAACTaGGGATCAAAGCAACACCAT +
Preference number: 4 (lower is better)
Translates to: VVRYKQPWLESKPQKQESGKKIN*GSKQHH
Trigger: ATGGTGTTGCTTTGATCCTCAGTTTATTTTCTTACC...GCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGATAGTATTTGCTACTTaGAGAGGAGGCTATACCTTG +
Preference number: 4 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRIVFAT*RGGYTL
Trigger: CAAGGTATAGCCTCCTCTTCAAGTAGCAAATACTAT...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGGAAGTAGTCTTAAGCTaGGCAGCCAGACGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: ETFPYIICKLVKVALYIREVVLS*AARRPG
Trigger: ACCTGGACGTCTGGCTGCTCAGCTTAAGACTACTTC...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp GAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTGCTCTATTGTCTTAATTGGCAAATCTaGGCAGATGAAATACCCTCA +
Preference number: 4 (lower is better)
Translates to: EVTYRGAQNSKQTLLLYCLNWQI*ADEIPS
Trigger: TGAGGGTATTTCATCTGCTCAGATTTGCCAATTAAG...ACAATAGAGCAGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR GCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGTTCAATTTTCACCTCTaGTCCTCCAAGGATGGCCTG +
Preference number: 4 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLFNFHL*SSKDGL
Trigger: CAGGCCATCCTTGGAGGAGCAGAGGTGAAAATTGAA...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp TGTCTCTTCTCCAAGCCTATCATTGCTAGTTACATTACTACTCATGTGAGGGTCCAGGGTCTCTTCTTCTaGCACACTATGATGTTTTGT +
Preference number: 4 (lower is better)
Translates to: CLFSKPIIASYITTHVRVQGLFF*HTMMFC
Trigger: ACAAAACATCATAGTGTGGCAGAAGAAGAGACCCTG...GACCCTCACATGAGTAGTAATGTAACTAGCAATGATAGGCTTGGAGAAGAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR GCA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGCCACCTTGCTCCTACTaGATTATAGCTTTTGATAGT +
Preference number: 4 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRPPCSY*IIAFDS
Trigger: ACTATCAAAAGCTATAATGCAGTAGGAGCAAGGTGG...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGCCAAAAGGTGTCATCTaGCCAGTGCGGATGAGCTCT +
Preference number: 4 (lower is better)
Translates to: ETFPYIICKLVKVALYIRPKGVI*PVRMSS
Trigger: AGAGCTCATCCGCACTGGCCAGATGACACCTTTTGG...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp GCCTCAGATTTCTCTTCAGATGATGTGGCATCATTTACAGATATGTTAGAAGCACTTGTTTCAGTGCTCTaGGATGCATCAGGACTAGTC +
Preference number: 4 (lower is better)
Translates to: ASDFSSDDVASFTDMLEALVSVL*DASGLV
Trigger: GACTAGTCCTGATGCATCCCAGAGCACTGAAACAAG...TGCTTCTAACATATCTGTAAATGATGCCACATCATCTGAAGAGAAATCTGAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR CCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGCGTTTTGGAACATCATaGTCTGCTCCAAAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLRFGTS*SAPKAG
Trigger: ACCAGCCTTTGGAGCAGACCATGATGTTCCAAAACG...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGCACCAGTACATAATCTaGGCTGGCTCCATCCATGAT +
Preference number: 4 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLHQYII*AGSIHD
Trigger: ATCATGGATGGAGCCAGCCCAGATTATGTACTGGTG...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp GCCTCAGATTTCTCTTCAGATGATGTGGCATCATTTACAGATATGTTAGAAGCACACCAGTACATAATCTaGGCTGGCTCCATCCATGAT +
Preference number: 4 (lower is better)
Translates to: ASDFSSDDVASFTDMLEAHQYII*AGSIHD
Trigger: ATCATGGATGGAGCCAGCCCAGATTATGTACTGGTG...TGCTTCTAACATATCTGTAAATGATGCCACATCATCTGAAGAGAAATCTGAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR CCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGCCTGACCTTTGTGGGTaGCAAATGGTAAATATAAAT +
Preference number: 4 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRPDLCG*QMVNIN
Trigger: ATTTATATTTACCATTTGCCACCCACAAAGGTCAGG...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp TTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGGAAACAAGACGAAGGCAACTaGAGAGAAGACAGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: FPYIICKLVKVALYIRRKQDEGN*REDSLP
Trigger: TGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTG...TTTCCTCCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGGATTCTCTAAATGCATaGAGAATACACACCAAACCT +
Preference number: 4 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRDSLNA*RIHTKP
Trigger: AGGTTTGGTGTGTATTCTCCATGCATTTAGAGAATC...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGGGGGATAAGAAATGCTaGCATCTTGCCCCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: ETFPYIICKLVKVALYIRGDKKC*HLAPPC
Trigger: ACAGGGAGGGGCAAGATGCCAGCATTTCTTATCCCC...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR TCA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGCACCACTTTCTTGCTTaGTTGCCATTTCTTCATTAT +
Preference number: 4 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRHHFLA*LPFLHY
Trigger: ATAATGAAGAAATGGCAATCAAGCAAGAAAGTGGTG...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATGTCCAGCATCTGCCTTaGCTGAGAAAACAGCAATAC +
Preference number: 4 (lower is better)
Translates to: IYIINPTILCRQSYTYRNVQHLP*LRKQQY
Trigger: GTATTGCTGTTTTCTCAGTCAAGGCAGATGCTGGAC...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGTCTAACTGTGCTCCCTaGCAGCATCTTTTGGGTAAA +
Preference number: 4 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLSNCAP*QHLLGK
Trigger: TTTACCCAAAAGATGCTGTCAGGGAGCACAGTTAGA...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp TGTCTCTTCTCCAAGCCTATCATTGCTAGTTACATTACTACTCATGTGAGGGTCTCCTTTTATGGAGGGTaGATTGATGCAAGCAATTCT +
Preference number: 4 (lower is better)
Translates to: CLFSKPIIASYITTHVRVSFYGG*IDASNS
Trigger: AGAATTGCTTGCATCAATTCACCCTCCATAAAAGGA...GACCCTCACATGAGTAGTAATGTAACTAGCAATGATAGGCTTGGAGAAGAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR TCA 90 bp TTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGGAAACACCAAATGACAGCGTaGGGAGTGTGGTTGGTAGAA +
Preference number: 4 (lower is better)
Translates to: FPYIICKLVKVALYIRRKHQMTA*GVWLVE
Trigger: TTCTACCAACCACACTCCTCACGCTGTCATTTGGTG...TTTCCTCCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGCCAAGTATAAGACACTaGAGAGGGGGAGAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMPSIRH*RGGERK
Trigger: TTTCCTTTCTCCCCCTCTTCAGTGTCTTATACTTGG...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp TTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGGAAACTCCCAAGGTCTCCTTaGCTTTGGCAATCCCACTTT +
Preference number: 4 (lower is better)
Translates to: FPYIICKLVKVALYIRRKLPRSP*LWQSHF
Trigger: AAAGTGGGATTGCCAAAGGCAAGGAGACCTTGGGAG...TTTCCTCCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGTCATCATCAATCTCCTaGACTGGCACTTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLSSSIS*TGTFFC
Trigger: GCAGAAGAAAGTGCCAGTGCAGGAGATTGATGATGA...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGTGGAACATCATGGTCTaGTCCAAAGGCTGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMWNIMV*SKGWLN
Trigger: ATTCAACCAGCCTTTGGAGCAGACCATGATGTTCCA...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp TTAGCAGTATTCTGGCTTGAGTTTCCAAATTCCTTCACCACCAGAAGTTCTATGAAGCAGGGAACTTCTTaGGTTTTGGAACATCATGGT +
Preference number: 4 (lower is better)
Translates to: LAVFWLEFPNSFTTRSSMKQGTS*VLEHHG
Trigger: ACCATGATGTTCCAAAACGCAAGAAGTTCCCTGCTT...CATAGAACTTCTGGTGGTGAAGGAATTTGGAAACTCAAGCCAGAATACTGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR GCA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGTCCATGATGGCATCGTaGTTCATGACACTGTGCACG +
Preference number: 4 (lower is better)
Translates to: ETFPYIICKLVKVALYIRSMMAS*FMTLCT
Trigger: CGTGCACAGTGTCATGAAGCACGATGCCATCATGGA...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp TTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGGAAATCCATGATGGCATCGTaGTTCATGACACTGTGCACG +
Preference number: 4 (lower is better)
Translates to: FPYIICKLVKVALYIRRKSMMAS*FMTLCT
Trigger: CGTGCACAGTGTCATGAAGCACGATGCCATCATGGA...TTTCCTCCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGCAGGGCCCTTCACATTaGCATTCTGGAAGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMQGPSH*HSGSEN
Trigger: ATTTTCACTTCCAGAATGGCAATGTGAAGGGCCCTG...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp AAACTTCAAGGAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTTCTTCACTACACCCCTaGAAACTTTTCCAAGTAACA +
Preference number: 4 (lower is better)
Translates to: KLQGGHLPWCSKFKTDLTSSLHP*KLFQVT
Trigger: TGTTACTTGGAAAAGTTTGCAGGGGTGTAGTGAAGA...AGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTCCTTGAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR CCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGCATCCTCCTCCAGACTaGCGTGATCTAGTTCAATTT +
Preference number: 4 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMHPPPD*RDLVQF
Trigger: AAATTGAACTAGATCACGCCAGTCTGGAGGAGGATG...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp AACTGCAAAGCCCTCTTCTGGAGTTTCTTGATGTGCTTTTTCAAACGCTCCTCTTTTTGGACAGAACTCTaGCTTTCTTGTTTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: NCKALFWSFLMCFFKRSSFWTEL*LSCLVC
Trigger: ACAAACCAAACAAGAAAGCCAGAGTTCTGTCCAAAA...AGAGGAGCGTTTGAAAAAGCACATCAAGAAACTCCAGAAGAGGGCTTTGCAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR CCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGACAGACAATTACAGTTaGACCCAACCCCTCAAACCT +
Preference number: 4 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMTDNYS*TQPLKP
Trigger: AGGTTTGAGGGGTTGGGTCCAACTGTAATTGTCTGT...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355832.10
CDS-3UTR CCA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGGTCACTTGCTTCTTCTaGCCTATTCTCCATGCTCGC +
Preference number: 4 (lower is better)
Translates to: ETFPYIICKLVKVALYIRVTCFF*PILHAR
Trigger: GCGAGCATGGAGAATAGGCCAGAAGAAGCAAGTGAC...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGATCTTTTCTTCAATaGTGCCCGCAGTCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: ETFPYIICKLVKVALYIRRSFLQ*CPQSGA
Trigger: GGCTCCTGACTGCGGGCACCATTGAAGAAAAGATCT...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGAACTTCTTGCGTTTTaGAACATCATGGTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMELLAF*NIMVCS
Trigger: GGAGCAGACCATGATGTTCCAAAACGCAAGAAGTTC...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp TTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGGAAACCATCAGTGTGGGCCTaGAAAGCGATGAAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: FPYIICKLVKVALYIRRKPSVWA*KAMKFL
Trigger: GAGAAACTTCATCGCTTTCCAGGCCCACACTGATGG...TTTCCTCCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp AAACTTCAAGGAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTCACCACTTTCTTGCTTaGTTGCCATTTCTTCATTAT +
Preference number: 4 (lower is better)
Translates to: KLQGGHLPWCSKFKTDLTHHFLA*LPFLHY
Trigger: ATAATGAAGAAATGGCAATCAAGCAAGAAAGTGGTG...AGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTCCTTGAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR TCA 90 bp TTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGGAAAAATCTAGTTTCCTGTTaGTGTCTCTGCTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: FPYIICKLVKVALYIRRKNLVSC*CLCWWQ
Trigger: CTGCCACCAGCAGAGACATCAACAGGAAACTAGATT...TTTCCTCCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp TTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGGAAATCCTCCAGACTGGCGTaGTCTAGTTCAATTTTCACC +
Preference number: 4 (lower is better)
Translates to: FPYIICKLVKVALYIRRKSSRLA*SSSIFT
Trigger: GGTGAAAATTGAACTAGATCACGCCAGTCTGGAGGA...TTTCCTCCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGATTTCCACTAATCACTaGCAACTCTTCTGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMISTNH*QLFWSR
Trigger: TCTGGACCAGAAGAGTTGTCAGTGATTAGTGGAAAT...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATTCTAACTGTGCTCCCTaGCAGCATCTTTTGGGTAAA +
Preference number: 4 (lower is better)
Translates to: IYIINPTILCRQSYTYRNSNCAP*QHLLGK
Trigger: TTTACCCAAAAGATGCTGTCAGGGAGCACAGTTAGA...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATCAAATGCTTCATGAGTaGACAAGGTCAGCAGATCAC +
Preference number: 4 (lower is better)
Translates to: IYIINPTILCRQSYTYRNQMLHE*TRSADH
Trigger: GTGATCTGCTGACCTTGTTCACTCATGAAGCATTTG...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGAAAGGAACTTGCCCATaGATGGCAAAACACAATGCA +
Preference number: 4 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLKGTCP*MAKHNA
Trigger: TGCATTGTGTTTTGCCATTCATGGGCAAGTTCCTTT...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AAACTTCAAGGAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTTGTTCCATTGTTATGTaGCGTTCCAAAATTGGAACA +
Preference number: 4 (lower is better)
Translates to: KLQGGHLPWCSKFKTDLTCSIVM*RSKIGT
Trigger: TGTTCCAATTTTGGAACGTCACATAACAATGGAACA...AGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTCCTTGAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR GCA 90 bp GCATTCTGTAGTATGATAGGTTTTCTATTTCAGACAGCTAAGAATGCCTTACAGAGGATGGCCTGGAGATaGTTTTGTTTTGCAGTGATC +
Preference number: 4 (lower is better)
Translates to: AFCSMIGFLFQTAKNALQRMAWR*FCFAVI
Trigger: GATCACTGCAAAACAAAAGCATCTCCAGGCCATCCT...CTGTAAGGCATTCTTAGCTGTCTGAAATAGAAAACCTATCATACTACAGAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR GCA 90 bp TTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGGAAAGCTGTAGCTCAGACCTaGCAAGAAGGCAATTATCTG +
Preference number: 4 (lower is better)
Translates to: FPYIICKLVKVALYIRRKAVAQT*QEGNYL
Trigger: CAGATAATTGCCTTCTTGGCAGGTCTGAGCTACAGC...TTTCCTCCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355832.10
CDS-3UTR GCA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGTCTCGGAGGTTATTTTaGATCGGTGAGCCAGACAGA +
Preference number: 4 (lower is better)
Translates to: ETFPYIICKLVKVALYIRSRRLF*IGEPDR
Trigger: TCTGTCTGGCTCACCGATGCAAAATAACCTCCGAGA...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp ATCATTGCTAGTTACATTACTACTCATGTGAGGGTCATCTTTCAAAGGATCACTCTGTACACAGTCACTTaGTTCTTCTGGCCTATTCTC +
Preference number: 4 (lower is better)
Translates to: IIASYITTHVRVIFQRITLYTVT*FFWPIL
Trigger: GAGAATAGGCCAGAAGAAGCAAGTGACTGTGTACAG...AGTGATCCTTTGAAAGATGACCCTCACATGAGTAGTAATGTAACTAGCAATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR GCA 90 bp AAACTTCAAGGAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTCCCACCTTAATAGTGTaGAAAGTAAGTCAAAACTCA +
Preference number: 4 (lower is better)
Translates to: KLQGGHLPWCSKFKTDLTPTLIV*KVSQNS
Trigger: TGAGTTTTGACTTACTTTGCACACTATTAAGGTGGG...AGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTCCTTGAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR CCA 90 bp GCATTCTGTAGTATGATAGGTTTTCTATTTCAGACAGCTAAGAATGCCTTACAGCATCCTCCTCCAGACTaGCGTGATCTAGTTCAATTT +
Preference number: 4 (lower is better)
Translates to: AFCSMIGFLFQTAKNALQHPPPD*RDLVQF
Trigger: AAATTGAACTAGATCACGCCAGTCTGGAGGAGGATG...CTGTAAGGCATTCTTAGCTGTCTGAAATAGAAAACCTATCATACTACAGAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR CCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATATCAATCTCCTGCACTaGCACTTTCTTCTGCCGTTT +
Preference number: 4 (lower is better)
Translates to: IYIINPTILCRQSYTYRNINLLH*HFLLPF
Trigger: AAACGGCAGAAGAAAGTGCCAGTGCAGGAGATTGAT...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAAGGGTTTGGAGAAATaGGTCCTTTTATGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: IYIINPTILCRQSYTYRNKGLEK*VLLWRV
Trigger: CACCCTCCATAAAAGGACCCATTTCTCCAAACCCTT...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGACAGACAATTACAGTTaGACCCAACCCCTCAAACTT +
Preference number: 4 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMTDNYS*TQPLKL
Trigger: AAGTTTGAGGGGTTGGGTCCAACTGTAATTGTCTGT...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR TCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATTTTTTCTCCTGTTTCTaGGGGATCTGGGTACCAAAA +
Preference number: 4 (lower is better)
Translates to: IYIINPTILCRQSYTYRNFFSCF*GIWVPK
Trigger: TTTTGGTACCCAGATCCCTCAGAAACAGGAGAAAAA...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp TTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGGAAAAATTCCTTCACCCACTaGTGCATCACTGTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: FPYIICKLVKVALYIRRKNSFTH*CITVVG
Trigger: TCCAACAACAGTGATGCATCAGTGGGTGAAGGAATT...TTTCCTCCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGTTCCAGTACCCAAACTaGTCTTCTTCTAGTTCATCA +
Preference number: 4 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMFQYPN*SSSSSS
Trigger: TGATGAACTAGAAGAAGATCAGTTTGGGTACTGGAA...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp GCCTCAGATTTCTCTTCAGATGATGTGGCATCATTTACAGATATGTTAGAAGCATTGTCAAAAACTGCTTaGAGATTTGTCGGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: ASDFSSDDVASFTDMLEALSKTA*RFVGGR
Trigger: TCTACCACCGACAAATCTTCAAGCAGTTTTTGACAA...TGCTTCTAACATATCTGTAAATGATGCCACATCATCTGAAGAGAAATCTGAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR TCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGTTGTCAAAAACTGCTTaGAGATTTGTCGGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMLSKTA*RFVGGR
Trigger: TCTACCACCGACAAATCTTCAAGCAGTTTTTGACAA...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAAAGGAACTTGCCCATaGATGGCAAAACACAATGCA +
Preference number: 4 (lower is better)
Translates to: IYIINPTILCRQSYTYRNKGTCP*MAKHNA
Trigger: TGCATTGTGTTTTGCCATTCATGGGCAAGTTCCTTT...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp GCATTCTGTAGTATGATAGGTTTTCTATTTCAGACAGCTAAGAATGCCTTACAGACCTGCTATTCAGTGTaGTATTCAACGGAACACTTC +
Preference number: 4 (lower is better)
Translates to: AFCSMIGFLFQTAKNALQTCYSV*YSTEHF
Trigger: GAAGTGTTCCGTTGAATATCACACTGAATAGCAGGT...CTGTAAGGCATTCTTAGCTGTCTGAAATAGAAAACCTATCATACTACAGAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR GCA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGGATGGCCTGGAGATaGTTTTGTTTTGCAGTGATC +
Preference number: 4 (lower is better)
Translates to: ETFPYIICKLVKVALYIRRMAWR*FCFAVI
Trigger: GATCACTGCAAAACAAAAGCATCTCCAGGCCATCCT...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGCAGTTTTGCTTGATCTaGCAAATACTTTTCGAAGCC +
Preference number: 4 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMQFCLI*QILFEA
Trigger: GGCTTCGAAAAGTATTTGGCAGATCAAGCAAAACTG...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGTCATCATCAATCTCCTaGACTGGCACTTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: ETFPYIICKLVKVALYIRSSSIS*TGTFFC
Trigger: GCAGAAGAAAGTGCCAGTGCAGGAGATTGATGATGA...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp TTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGGAAACTGTACACAGTCACTTaGTTCTTCTGGCCTATTCTC +
Preference number: 4 (lower is better)
Translates to: FPYIICKLVKVALYIRRKLYTVT*FFWPIL
Trigger: GAGAATAGGCCAGAAGAAGCAAGTGACTGTGTACAG...TTTCCTCCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGTGGAACATCATGGTCTaGTCCAAAGGCTGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: ETFPYIICKLVKVALYIRWNIMV*SKGWLN
Trigger: ATTCAACCAGCCTTTGGAGCAGACCATGATGTTCCA...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGATGTTGATGAAGGATaGTGCACAGAGAAGTTAGAA +
Preference number: 4 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMDVDEG*CTEKLE
Trigger: TTCTAACTTCTCTGTGCAGCATCCTTCATCAACATC...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGAATCCAACAATTCTGTaGAGGCAGAGCTATACTTAC +
Preference number: 4 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLNPTIL*RQSYTY
Trigger: GTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp GCATTCTGTAGTATGATAGGTTTTCTATTTCAGACAGCTAAGAATGCCTTACAGAGAATGAAAGGTGTGTaGAGAGCAGGAAGCAGAATT +
Preference number: 4 (lower is better)
Translates to: AFCSMIGFLFQTAKNALQRMKGV*RAGSRI
Trigger: AATTCTGCTTCCTGCTCTGCACACACCTTTCATTCT...CTGTAAGGCATTCTTAGCTGTCTGAAATAGAAAACCTATCATACTACAGAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR CCA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGCATCCTCCTCCAGACTaGCGTGATCTAGTTCAATTT +
Preference number: 4 (lower is better)
Translates to: ETFPYIICKLVKVALYIRHPPPD*RDLVQF
Trigger: AAATTGAACTAGATCACGCCAGTCTGGAGGAGGATG...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATGCTTTCATCACCAGATaGCATAGAAGTTTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: IYIINPTILCRQSYTYRNAFITR*HRSFAC
Trigger: ACAGGCAAAACTTCTATGCCATCTGGTGATGAAAGC...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGCTGTTTGAGCCTGGCTaGGTCTTTCTCTTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: ETFPYIICKLVKVALYIRLFEPG*VFLFCK
Trigger: CTTACAAAAGAGAAAGACCCAGCCAGGCTCAAACAG...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATCTTAGGCTTTTGCTTTaGTCTCAGATGTTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: IYIINPTILCRQSYTYRNLRLLL*SQMFLQ
Trigger: CTGGAGAAACATCTGAGACCAAAGCAAAAGCCTAAG...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGTCTTCTGCCACACTATaGTGTTTTGTTTTTGACTTG +
Preference number: 4 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMSSATL*CFVFDL
Trigger: CAAGTCAAAAACAAAACATCATAGTGTGGCAGAAGA...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGAATTTACCAGTACCTTaGAAAGAGGATCTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLNLPVP*KEDLSK
Trigger: CTTGGAAAGATCCTCTTTTCAAGGTACTGGTAAATT...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR TCA 90 bp ATCATTGCTAGTTACATTACTACTCATGTGAGGGTCATCTTTCAAAGGATCACTATGAATAGATGTGAATaGCTGAAGAACCTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: IIASYITTHVRVIFQRITMNRCE*LKNLLH
Trigger: ATGCAGGAGGTTCTTCAGTCATTCACATCTATTCAT...AGTGATCCTTTGAAAGATGACCCTCACATGAGTAGTAATGTAACTAGCAATGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR GCA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGTGGAGCTTTTCTAGCTaGTCTTTTATTACAACCTTG +
Preference number: 4 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLWSFSS*SFITTL
Trigger: CAAGGTTGTAATAAAAGAGCAGCTAGAAAAGCTCCA...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAGATCAGGGTGGTTaGAAATTTTTCTTAGGGCTA +
Preference number: 4 (lower is better)
Translates to: IYIINPTILCRQSYTYRNRDQGG*KFFLGL
Trigger: TAGCCCTAAGAAAAATTTGCAACCACCCTGATCTCT...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp TTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGGAAATTCTGGTCCAGATACTaGATTTGTCTCTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: FPYIICKLVKVALYIRRKFWSRY*ICLFSK
Trigger: CTTGGAGAAGAGACAAATGCAGTATCTGGACCAGAA...TTTCCTCCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATGATGTTGATGAAGGATaGTGCACAGAGAAGTTAGAA +
Preference number: 4 (lower is better)
Translates to: IYIINPTILCRQSYTYRNDVDEG*CTEKLE
Trigger: TTCTAACTTCTCTGTGCAGCATCCTTCATCAACATC...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATGAGAGGAAAAGAGCATaGCAGAGAATACAAATCCAA +
Preference number: 4 (lower is better)
Translates to: IYIINPTILCRQSYTYRNERKRA*QRIQIQ
Trigger: TTGGATTTGTATTCTCTGGCATGCTCTTTTCCTCTC...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATTCTGGCAGAATCAGGTaGTTTCTAGCTCTCATTTTA +
Preference number: 4 (lower is better)
Translates to: IYIINPTILCRQSYTYRNSGRIR*FLALIL
Trigger: TAAAATGAGAGCTAGAAACCACCTGATTCTGCCAGA...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
3UTR CAA 72 bp AGTTTCTTGATGTGCTTTTTCAAACGCTCCTCTTTTTaGGACAGAACTCTGGCTTTCTTGTTTGGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: SFLMCFFKRSSF*DRTLAFLFGLF
Trigger: AAACAAACCAAACAAGAAAGCCAGAGTTCTGTCCAAAAAAGAGGAGCGTTTGAAAAAGCACATCAAGAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR TCA 90 bp ATCATTGCTAGTTACATTACTACTCATGTGAGGGTCATCTTTCAAAGGATCACTAGATTTCTCTTCAGATaGTGTGGCATCATTTACAGA +
Preference number: 4 (lower is better)
Translates to: IIASYITTHVRVIFQRITRFLFR*CGIIYR
Trigger: TCTGTAAATGATGCCACATCATCTGAAGAGAAATCT...AGTGATCCTTTGAAAGATGACCCTCACATGAGTAGTAATGTAACTAGCAATGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR TCA 90 bp TTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGGAAAATAGTATTTGCTACTTaGAGAGGAGGCTATACCTTG +
Preference number: 4 (lower is better)
Translates to: FPYIICKLVKVALYIRRKIVFAT*RGGYTL
Trigger: CAAGGTATAGCCTCCTCTTCAAGTAGCAAATACTAT...TTTCCTCCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATTACCAGAAAAGACTTTaGGGACAATCATTCTACCAT +
Preference number: 4 (lower is better)
Translates to: IYIINPTILCRQSYTYRNYQKRL*GQSFYH
Trigger: ATGGTAGAATGATTGTCCTCAAAGTCTTTTCTGGTA...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp ATCATTGCTAGTTACATTACTACTCATGTGAGGGTCATCTTTCAAAGGATCACTCTATTTGTCAAAAACTaGTTGAAGATTTGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: IIASYITTHVRVIFQRITLFVKN*LKICRW
Trigger: CCACCGACAAATCTTCAAGCAGTTTTTGACAAATAG...AGTGATCCTTTGAAAGATGACCCTCACATGAGTAGTAATGTAACTAGCAATGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR GCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATCTATTTGTCAAAAACTaGTTGAAGATTTGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: IYIINPTILCRQSYTYRNLFVKN*LKICRW
Trigger: CCACCGACAAATCTTCAAGCAGTTTTTGACAAATAG...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGTCGATTAGAAGTTACTaGATTTACTTCAGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMSIRSY*IYFSSF
Trigger: AAAGGAGCTGAAGTAAATGCAGTAACTTCTAATCGA...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATATCCAAGAAACAAACTaGACTAAGACAGCTAAGAAG +
Preference number: 4 (lower is better)
Translates to: IYIINPTILCRQSYTYRNIQETN*TKTAKK
Trigger: CTTCTTAGCTGTCTTAGTGCAGTTTGTTTCTTGGAT...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGTATGATACCCAAATaGTTCATGAGTGAACAAGGT +
Preference number: 4 (lower is better)
Translates to: IYIINPTILCRQSYTYRNSMIPK*FMSEQG
Trigger: ACCTTGTTCACTCATGAAGCATTTGGGTATCATACT...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR GCA 90 bp GCATTCTGTAGTATGATAGGTTTTCTATTTCAGACAGCTAAGAATGCCTTACAGATCAATGTACACAACTaGCCATACCAACACACAAAA +
Preference number: 4 (lower is better)
Translates to: AFCSMIGFLFQTAKNALQINVHN*PYQHTK
Trigger: TTTTGTGTGTTGGTATGGGCAGTTGTGTACATTGAT...CTGTAAGGCATTCTTAGCTGTCTGAAATAGAAAACCTATCATACTACAGAATGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR CCA 90 bp GCCTCAGATTTCTCTTCAGATGATGTGGCATCATTTACAGATATGTTAGAAGCATCTCTTCAGATGATGTaGCATCATTTACAGATATGT +
Preference number: 4 (lower is better)
Translates to: ASDFSSDDVASFTDMLEASLQMM*HHLQIC
Trigger: ACATATCTGTAAATGATGCCACATCATCTGAAGAGA...TGCTTCTAACATATCTGTAAATGATGCCACATCATCTGAAGAGAAATCTGAGGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR CCA 90 bp GCATTCTGTAGTATGATAGGTTTTCTATTTCAGACAGCTAAGAATGCCTTACAGATTCAGGCACCAAGCTaGGTATTTAATATAGTTTGC +
Preference number: 4 (lower is better)
Translates to: AFCSMIGFLFQTAKNALQIQAPS*VFNIVC
Trigger: GCAAACTATATTAAATACCCAGCTTGGTGCCTGAAT...CTGTAAGGCATTCTTAGCTGTCTGAAATAGAAAACCTATCATACTACAGAATGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR TCA 90 bp TTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGGAAAATACTTTTCGAAGCCTaGTGCTTCATTAAGCATGAT +
Preference number: 4 (lower is better)
Translates to: FPYIICKLVKVALYIRRKILFEA*CFIKHD
Trigger: ATCATGCTTAATGAAGCATCAGGCTTCGAAAAGTAT...TTTCCTCCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR TCA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGATTTCTCTTCAGATaGTGTGGCATCATTTACAGA +
Preference number: 4 (lower is better)
Translates to: ETFPYIICKLVKVALYIRRFLFR*CGIIYR
Trigger: TCTGTAAATGATGCCACATCATCTGAAGAGAAATCT...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR GCA 90 bp TTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGGAAACTATTTGTCAAAAACTaGTTGAAGATTTGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: FPYIICKLVKVALYIRRKLFVKN*LKICRW
Trigger: CCACCGACAAATCTTCAAGCAGTTTTTGACAAATAG...TTTCCTCCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp TTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGGAAAGTAGGTATGGATTTATaGTATCTCGTAAGACACATG +
Preference number: 4 (lower is better)
Translates to: FPYIICKLVKVALYIRRKVGMDL*YLVRHM
Trigger: CATGTGTCTTACGAGATACCATAAATCCATACCTAC...TTTCCTCCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGTTTTTAGATGGCATTTaGGTGTCTGAACATCTGATC +
Preference number: 4 (lower is better)
Translates to: ETFPYIICKLVKVALYIRFLDGI*VSEHLI
Trigger: GATCAGATGTTCAGACACCCAAATGCCATCTAAAAA...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CCA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGTGTTTAGCAGTATTCTaGCTTGAGTTTCCAAATTCC +
Preference number: 4 (lower is better)
Translates to: ETFPYIICKLVKVALYIRCLAVF*LEFPNS
Trigger: GGAATTTGGAAACTCAAGCCAGAATACTGCTAAACA...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
3UTR CAA 72 bp CAGAGCCAAGAAACATTTCCGTACATTATATGTAAATaGGTAAAGGTGGCCTTATACATCAGGAGGAAAATA +
Preference number: 4 (lower is better)
Translates to: QSQETFPYIICK*VKVALYIRRKI
Trigger: TATTTTCCTCCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTCTTGGCTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS CCA 90 bp CGAGCGCCCACAAGGAAACAGAGACGCTACCGCCGCCAGCCGCCTTaGAACCCAGCTCGACGGGCCGTGGCGCCTGCGCCCTCAGCTCAA +
Preference number: 5 (lower is better)
Translates to: RAPTRKQRRYRRQPP*NPARRAVAPAPSAQ
Trigger: TTGAGCTGAGGGCGCAGGCGCCACGGCCCGTCGAGCTGGGTTCCAAGGCGGCTGGCGGCGGTAGCGTCTCTGTTTCCTTGTGGGCGCTCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000447839.7
ENST00000680107.1
CDS TCA 90 bp CCCTGCAGCTCAAGGGCCTGGGCGCTAGGCTCTACTGCCTGGATCTaGTGTCGGTCGATGTGCAGCAGGGCTGGCCCTCTCCTCGGAGCT +
Preference number: 5 (lower is better)
Translates to: PCSSRAWALGSTAWI*CRSMCSRAGPLLGA
Trigger: AGCTCCGAGGAGAGGGCCAGCCCTGCTGCACATCGACCGACATCAGATCCAGGCAGTAGAGCCTAGCGCCCAGGCCCTTGAGCTGCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000355832.10
ENST00000447839.7
ENST00000462247.1
ENST00000515869.1
ENST00000679596.1
ENST00000679811.1
ENST00000680107.1
ENST00000680233.1
ENST00000681632.1
ENST00000681659.1
CDS GCA 90 bp CTGCTCCCACCTGCAGGTCCACACTCTGCTGAAGCCCCACACCACTaGCACTCTGGAACAGGCACCTCCACCAGCCACCCTGTCCCTCCC +
Preference number: 5 (lower is better)
Translates to: LLPPAGPHSAEAPHH*HSGTGTSTSHPVPP
Trigger: GGGAGGGACAGGGTGGCTGGTGGAGGTGCCTGTTCCAGAGTGGCAGTGGTGTGGGGCTTCAGCAGAGTGTGGACCTGCAGGTGGGAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679552.1
CDS-3UTR CAA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGCCGCCGCCAGCCGCCTaGGAACCCAGCTCGACGGGC +
Preference number: 5 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWPPPAA*EPSSTG
Trigger: GCCCGTCGAGCTGGGTTCCAAGGCGGCTGGCGGCGG...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS GCA 90 bp CACACCCAAACCCTGCAGCTCAAGGGCCTGGGCGCTAGGCTCTACTaGCTGGATCTGATGTCGGTCGATGTGCAGCAGGGCTGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: HTQTLQLKGLGARLY*LDLMSVDVQQGWPS
Trigger: AGAGGGCCAGCCCTGCTGCACATCGACCGACATCAGATCCAGGCAGTAGAGCCTAGCGCCCAGGCCCTTGAGCTGCAGGGTTTGGGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000355832.10
ENST00000447839.7
ENST00000462247.1
ENST00000515869.1
ENST00000679596.1
ENST00000679811.1
ENST00000680107.1
ENST00000680233.1
ENST00000681632.1
ENST00000681659.1
CDS CCA 90 bp CTGGCCCTCTCCTCGGAGCTGCTGATGCGCACCCCACAGCAGAGGTaGACAGCCCGTCACCCACAGAACGAAAGGAGAGGTACTCCTCCA +
Preference number: 5 (lower is better)
Translates to: LALSSELLMRTPQQR*TARHPQNERRGTPP
Trigger: TGGAGGAGTACCTCTCCTTTCGTTCTGTGGGTGACGGGCTGTCCACCTCTGCTGTGGGGTGCGCATCAGCAGCTCCGAGGAGAGGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000355832.10
ENST00000447839.7
ENST00000462247.1
ENST00000515869.1
ENST00000679596.1
ENST00000679811.1
ENST00000680107.1
ENST00000680233.1
ENST00000681632.1
ENST00000681659.1
CDS-3UTR CAA 90 bp AGAAGACAGCCTGCCAGCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGCCGTTTCCCGCCCTaGGGCAGAGGCTTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: RRQPASLQTREAWSGVTSCRFPP*GRGFSS
Trigger: TGAGCTGAAGCCTCTGCCCAAGGGCGGGAAACGGCA...TGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCACCGCCGCCAGCCGCCTaGGAACCCAGCTCGACGGGC +
Preference number: 5 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSPPPAA*EPSSTG
Trigger: GCCCGTCGAGCTGGGTTCCAAGGCGGCTGGCGGCGG...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCTGCCGTTTCCCGCCCTaGGGCAGAGGCTTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVCRFPP*GRGFSS
Trigger: TGAGCTGAAGCCTCTGCCCAAGGGCGGGAAACGGCA...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp TGCCACTTGAAGCTGGAGGGGATAAGAAATGCTGGCATCTTGCCCCTCCCTGTGTTTGCCCCCGTCAGGTaGACACCTAAGCCGCCCACC +
Preference number: 5 (lower is better)
Translates to: CHLKLEGIRNAGILPLPVFAPVR*TPKPPT
Trigger: GGTGGGCGGCTTAGGTGTCAACCTGACGGGGGCAAA...CACAGGGAGGGGCAAGATGCCAGCATTTCTTATCCCCTCCAGCTTCAAGTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS CCA 90 bp ATGGTGCCCGCAGTCAGGAGCCTGTACACAGTCACTTGCTTCTTCTaGCCTATTCTCCATGCTCGCTCCCGGGCCTGCAACAGAGAGAGA +
Preference number: 5 (lower is better)
Translates to: MVPAVRSLYTVTCFF*PILHARSRACNRER
Trigger: TCTCTCTCTGTTGCAGGCCCGGGAGCGAGCATGGAGAATAGGCCAGAAGAAGCAAGTGACTGTGTACAGGCTCCTGACTGCGGGCACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS-3UTR CAA 90 bp GAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTGCTCTATTGTCCGCCGCCAGCCGCCTaGGAACCCAGCTCGACGGGC +
Preference number: 5 (lower is better)
Translates to: EVTYRGAQNSKQTLLLYCPPPAA*EPSSTG
Trigger: GCCCGTCGAGCTGGGTTCCAAGGCGGCTGGCGGCGG...ACAATAGAGCAGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR CAA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTCCTGCGTGTCCGTGCTaGGGTTCCAGTCTGGGTCAT +
Preference number: 5 (lower is better)
Translates to: PARRHGNNVSDLHTETPPPACPC*GSSLGH
Trigger: ATGACCCAGACTGGAACCCAAGCACGGACACGCAGG...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS GCA 90 bp CAGGAGCCTGTACACAGTCACTTGCTTCTTCTGGCCTATTCTCCATaGTCGCTCCCGGGCCTGCAACAGAGAGAGAGAGACCTCTCAACG +
Preference number: 5 (lower is better)
Translates to: QEPVHSHLLLLAYSP*SLPGLQQRERDLST
Trigger: CGTTGAGAGGTCTCTCTCTCTCTGTTGCAGGCCCGGGAGCGAGCATGGAGAATAGGCCAGAAGAAGCAAGTGACTGTGTACAGGCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS-3UTR CAA 90 bp GCTTCAGCTCATAGTCAGTACCATCTCCAGACAGGTCCGCCTCTGCCCCCTCCAAAGGTCTCCTTGCCTTaGGCAATCCCACTTTCCCCT +
Preference number: 5 (lower is better)
Translates to: ASAHSQYHLQTGPPLPPPKVSLP*AIPLSP
Trigger: AGGGGAAAGTGGGATTGCCAAAGGCAAGGAGACCTT...TGGAGGGGGCAGAGGCGGACCTGTCTGGAGATGGTACTGACTATGAGCTGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR CAA 90 bp CCCTGTGGCCAGTCCAGGTGGGAACACCAGACACTGCTCCCAGACACCGCTGACTTCTACTTAACTGCATaGTTCTCCAAGTCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: PCGQSRWEHQTLLPDTADFYLTA*FSKSLQ
Trigger: CTGGAGGGACTTGGAGAACAATGCAGTTAAGTAGAA...GTCAGCGGTGTCTGGGAGCAGTGTCTGGTGTTCCCACCTGGACTGGCCACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS CCA 90 bp CCCTCCCAAGCCCAGATGTCAATGCTGCTTTGGTGGGTAAGGGTGTaGATACGCTTAGTCCTTTCCCTCCACGTACAGCAGCACCACTCA +
Preference number: 5 (lower is better)
Translates to: PSQAQMSMLLWWVRV*IRLVLSLHVQQHHS
Trigger: TGAGTGGTGCTGCTGTACGTGGAGGGAAAGGACTAAGCGTATCCACACCCTTACCCACCAAAGCAGCATTGACATCTGGGCTTGGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS-3UTR CAA 90 bp CTCCCTGTTCCAGCACGTCCTGGTCATAGACGTCCACACCCAAACCCTGCAGCTGGGGGATTCCCTCATTaGGCATTCTCTACAGACTAC +
Preference number: 5 (lower is better)
Translates to: LPVPARPGHRRPHPNPAAGGFPH*AFSTDY
Trigger: GTAGTCTGTAGAGAATGCCAAATGAGGGAATCCCCC...AGCTGCAGGGTTTGGGTGTGGACGTCTATGACCAGGACGTGCTGGAACAGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR CAA 90 bp CCTGTGAGGTACCATACCTCTGGACAGGGAGCTGAGGGAGACGGAGCTCTGTTTGCTCCTGAGTTTGACTaGAGTGGGGGATTCCCTCAT +
Preference number: 5 (lower is better)
Translates to: PVRYHTSGQGAEGDGALFAPEFD*SGGFPH
Trigger: ATGAGGGAATCCCCCACTCAAGTCAAACTCAGGAGC...AAACAGAGCTCCGTCTCCCTCAGCTCCCTGTCCAGAGGTATGGTACCTCACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR CAA 90 bp CCTGTGAGGTACCATACCTCTGGACAGGGAGCTGAGGGAGACGGAGCTCTGTTTACTCCCAAGGTCTCCTaGCCTTTGGCAATCCCACTT +
Preference number: 5 (lower is better)
Translates to: PVRYHTSGQGAEGDGALFTPKVS*PLAIPL
Trigger: AAGTGGGATTGCCAAAGGCAAGGAGACCTTGGGAGT...AAACAGAGCTCCGTCTCCCTCAGCTCCCTGTCCAGAGGTATGGTACCTCACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR CAA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACTTTGCCCCCGTCAGGTaGACACCTAAGCCGCCCACC +
Preference number: 5 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHFAPVR*TPKPPT
Trigger: GGTGGGCGGCTTAGGTGTCAACCTGACGGGGGCAAA...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp ATGACAACTCTGTTTGCCCCCGTCAGGTTGACACCTAAGCCGCCCACCCGCGTGTCCTTGGCCTCACTCTaGTTTTCACTGTCTTGCTTC +
Preference number: 5 (lower is better)
Translates to: MTTLFAPVRLTPKPPTRVSLASL*FSLSCF
Trigger: GAAGCAAGACAGTGAAAACAAGAGTGAGGCCAAGGA...CACGCGGGTGGGCGGCTTAGGTGTCAACCTGACGGGGGCAAACAGAGTTGTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS GCA 90 bp GTCACTTGCTTCTTCTGGCCTATTCTCCATGCTCGCTCCCGGGCCTaGAACAGAGAGAGAGAGACCTCTCAACGAGAATCCTTCCCAATG +
Preference number: 5 (lower is better)
Translates to: VTCFFWPILHARSRA*NRERETSQRESFPM
Trigger: CATTGGGAAGGATTCTCGTTGAGAGGTCTCTCTCTCTCTGTTGCAGGCCCGGGAGCGAGCATGGAGAATAGGCCAGAAGAAGCAAGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS CCA 90 bp TGGAGGCTCAAGAGACCAATCCCTCCTAGAGGGCAAACAGTGGACTaGTGGAAAACAACAGCCATAAATCACACTGTCAGGCGGCGGGGA +
Preference number: 5 (lower is better)
Translates to: WRLKRPIPPRGQTVD*WKTTAINHTVRRRG
Trigger: TCCCCGCCGCCTGACAGTGTGATTTATGGCTGTTGTTTTCCACCAGTCCACTGTTTGCCCTCTAGGAGGGATTGGTCTCTTGAGCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623073.3
CDS-3UTR CAA 90 bp CTGAGGGATCTGGGTACCAAAAGGTGTCATCTGGCCAGTGCGGATGAGCTCTTCGCTCCTGAGTTTGACTaGAGTGGGGGATTCCCTCAT +
Preference number: 5 (lower is better)
Translates to: LRDLGTKRCHLASADELFAPEFD*SGGFPH
Trigger: ATGAGGGAATCCCCCACTCAAGTCAAACTCAGGAGC...GAAGAGCTCATCCGCACTGGCCAGATGACACCTTTTGGTACCCAGATCCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR CAA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCAAGGTCTCCTTGCCTTaGGCAATCCCACTTTCCCCT +
Preference number: 5 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVKVSLP*AIPLSP
Trigger: AGGGGAAAGTGGGATTGCCAAAGGCAAGGAGACCTT...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTACTCCCAAGGTCTCCTaGCCTTTGGCAATCCCACTT +
Preference number: 5 (lower is better)
Translates to: PARRHGNNVSDLHTETPPTPKVS*PLAIPL
Trigger: AAGTGGGATTGCCAAAGGCAAGGAGACCTTGGGAGT...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp ATCTGGGTACCAAAAGGTGTCATCTGGCCAGTGCGGATGAGCTCTTCCCAGGCAACTCCCAAGGTCTCCTaGCCTTTGGCAATCCCACTT +
Preference number: 5 (lower is better)
Translates to: IWVPKGVIWPVRMSSSQATPKVS*PLAIPL
Trigger: AAGTGGGATTGCCAAAGGCAAGGAGACCTTGGGAGT...TGCCTGGGAAGAGCTCATCCGCACTGGCCAGATGACACCTTTTGGTACCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR CAA 90 bp AGAAGACAGCCTGCCAGCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCAGACAGACAATTACAGTaGGACCCAACCCCTCAAACC +
Preference number: 5 (lower is better)
Translates to: RRQPASLQTREAWSGVTSDRQLQ*DPTPQT
Trigger: GGTTTGAGGGGTTGGGTCCAACTGTAATTGTCTGTC...TGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355832.10
CDS-3UTR CAA 90 bp ATGACAACTCTGTTTGCCCCCGTCAGGTTGACACCTAAGCCGCCCACCCGCGTGGTCCAGATACTGCATTaGTCTCTTCTCCAAGCCTAT +
Preference number: 5 (lower is better)
Translates to: MTTLFAPVRLTPKPPTRVVQILH*SLLQAY
Trigger: ATAGGCTTGGAGAAGAGACAAATGCAGTATCTGGAC...CACGCGGGTGGGCGGCTTAGGTGTCAACCTGACGGGGGCAAACAGAGTTGTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR CAA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGAGATACAAACAGCCTaGGCTGGAATCCAAACCGCA +
Preference number: 5 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWEIQTA*AGIQTA
Trigger: TGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTC...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp AACACCAGACACTGCTCCCAGACACCGCTGACGAGAGAGCCTCAGTGCTTTCAGGAGATACAAACAGCCTaGGCTGGAATCCAAACCGCA +
Preference number: 5 (lower is better)
Translates to: NTRHCSQTPLTREPQCFQEIQTA*AGIQTA
Trigger: TGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTC...CTGAAAGCACTGAGGCTCTCTCGTCAGCGGTGTCTGGGAGCAGTGTCTGGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR CAA 90 bp CCCTGTGGCCAGTCCAGGTGGGAACACCAGACACTGCTCCCAGACACCGCTGACTTTATGGAGGGTGAATaGATGCAAGCAATTCTGCTA +
Preference number: 5 (lower is better)
Translates to: PCGQSRWEHQTLLPDTADFMEGE*MQAILL
Trigger: TAGCAGAATTGCTTGCATCAATTCACCCTCCATAAA...GTCAGCGGTGTCTGGGAGCAGTGTCTGGTGTTCCCACCTGGACTGGCCACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR CAA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGAATCTAGTTTCCTGTaGATGTCTCTGCTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWESSFL*MSLLVA
Trigger: TGCCACCAGCAGAGACATCAACAGGAAACTAGATTC...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp TTGGGAAAAAGTCATCATCAATCTCCTGCACTGGCACTTTCTTCTGCCGTTTCCTGCCGTTTCCCGCCCTaGGGCAGAGGCTTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: LGKSHHQSPALALSSAVSCRFPP*GRGFSS
Trigger: TGAGCTGAAGCCTCTGCCCAAGGGCGGGAAACGGCA...GGAAACGGCAGAAGAAAGTGCCAGTGCAGGAGATTGATGATGACTTTTTCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR CAA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCATTTGCCCCCGTCAGGTaGACACCTAAGCCGCCCACC +
Preference number: 5 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSFAPVR*TPKPPT
Trigger: GGTGGGCGGCTTAGGTGTCAACCTGACGGGGGCAAA...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGCCTGTACACAGTCACTaGCTTCTTCTGGCCTATTCT +
Preference number: 5 (lower is better)
Translates to: ECKGRRKTKATGEKTACQPVHSH*LLLAYS
Trigger: AGAATAGGCCAGAAGAAGCAAGTGACTGTGTACAGG...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGTCCTGGGCCACTCGGTaGGCTTCTGCCTCCACCAGT +
Preference number: 5 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRSWATR*ASASTS
Trigger: ACTGGTGGAGGCAGAAGCCAACCGAGTGGCCCAGGA...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp CCTGTGAGGTACCATACCTCTGGACAGGGAGCTGAGGGAGACGGAGCTCTGTTTCCTGGCACTTCTCTGTaGGAGATGTTGATGAAGGAT +
Preference number: 5 (lower is better)
Translates to: PVRYHTSGQGAEGDGALFPGTSL*EMLMKD
Trigger: ATCCTTCATCAACATCTCCAACAGAGAAGTGCCAGG...AAACAGAGCTCCGTCTCCCTCAGCTCCCTGTCCAGAGGTATGGTACCTCACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR CAA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTGGAACAAGGACCACCTaGCTCCTACTGCATTATAGC +
Preference number: 5 (lower is better)
Translates to: PARRHGNNVSDLHTETPPGTRTT*LLLHYS
Trigger: GCTATAATGCAGTAGGAGCAAGGTGGTCCTTGTTCC...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp CTGAGGGATCTGGGTACCAAAAGGTGTCATCTGGCCAGTGCGGATGAGCTCTTCAGTGTTCGAGGCATCTaGGGACTTAACCGCTGCTTA +
Preference number: 5 (lower is better)
Translates to: LRDLGTKRCHLASADELFSVRGI*GLNRCL
Trigger: TAAGCAGCGGTTAAGTCCCAAGATGCCTCGAACACT...GAAGAGCTCATCCGCACTGGCCAGATGACACCTTTTGGTACCCAGATCCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR CAA 90 bp CCTGTGAGGTACCATACCTCTGGACAGGGAGCTGAGGGAGACGGAGCTCTGTTTGACAGACAATTACAGTaGGACCCAACCCCTCAAACT +
Preference number: 5 (lower is better)
Translates to: PVRYHTSGQGAEGDGALFDRQLQ*DPTPQT
Trigger: AGTTTGAGGGGTTGGGTCCAACTGTAATTGTCTGTC...AAACAGAGCTCCGTCTCCCTCAGCTCCCTGTCCAGAGGTATGGTACCTCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS GCA 90 bp CCCAATCCCATTTCATCTCCCAGAATTCCTCCTGCCTGCTGGCAGTaGAATTCCCACAGCCACCTAACACCTGTCTGCTGGTACCTTAAA +
Preference number: 5 (lower is better)
Translates to: PNPISSPRIPPACWQ*NSHSHLTPVCWYLK
Trigger: TTTAAGGTACCAGCAGACAGGTGTTAGGTGGCTGTGGGAATTGCACTGCCAGCAGGCAGGAGGAATTCTGGGAGATGAAATGGGATTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623115.3
ENST00000623318.1
CDS-3UTR CAA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTTGGTTTGTTTTTATTTaGCACTGGGGCTGGAGGCGT +
Preference number: 5 (lower is better)
Translates to: PARRHGNNVSDLHTETPPWFVFI*HWGWRR
Trigger: ACGCCTCCAGCCCCAGTGCAAAATAAAAACAAACCA...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCTGGTTTGTTTTTATTTaGCACTGGGGCTGGAGGCGT +
Preference number: 5 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVWFVFI*HWGWRR
Trigger: ACGCCTCCAGCCCCAGTGCAAAATAAAAACAAACCA...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGATGGATGTGTCCTCATaGTATCTCGTAATCAGTGGC +
Preference number: 5 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWMDVSS*YLVISG
Trigger: GCCACTGATTACGAGATACAATGAGGACACATCCAT...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCACCTGCGTGTCCGTGCTaGGGTTCCAGTCTGGGTCAT +
Preference number: 5 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSPACPC*GSSLGH
Trigger: ATGACCCAGACTGGAACCCAAGCACGGACACGCAGG...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCGGAACTTCTTGCGTTTaGGAACATCATGGTCTGCTC +
Preference number: 5 (lower is better)
Translates to: KECKGRRKTKATGEKTACGTSCV*EHHGLL
Trigger: GAGCAGACCATGATGTTCCAAAACGCAAGAAGTTCC...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCGAAGCAGGGAACTTCTaGCGTTTTGGAACATCATGG +
Preference number: 5 (lower is better)
Translates to: KECKGRRKTKATGEKTACEAGNF*RFGTSW
Trigger: CCATGATGTTCCAAAACGCAAGAAGTTCCCTGCTTC...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTCGAGTTCCTTCAAACTaGGCGTCTCTGCAATGCTTA +
Preference number: 5 (lower is better)
Translates to: PARRHGNNVSDLHTETPPRVPSN*ASLQCL
Trigger: TAAGCATTGCAGAGACGCCAAGTTTGAAGGAACTCG...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCGAGTTCCTTCAAACTaGGCGTCTCTGCAATGCTTA +
Preference number: 5 (lower is better)
Translates to: KECKGRRKTKATGEKTACRVPSN*ASLQCL
Trigger: TAAGCATTGCAGAGACGCCAAGTTTGAAGGAACTCG...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCCTTGGCCTCACTCTaGTTTTCACTGTCTTGCTTC +
Preference number: 5 (lower is better)
Translates to: LASQPARKGNVKESAYPASLASL*FSLSCF
Trigger: GAAGCAAGACAGTGAAAACAAGAGTGAGGCCAAGGA...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTTCCTTGGCCTCACTCTaGTTTTCACTGTCTTGCTTC +
Preference number: 5 (lower is better)
Translates to: PARRHGNNVSDLHTETPPSLASL*FSLSCF
Trigger: GAAGCAAGACAGTGAAAACAAGAGTGAGGCCAAGGA...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGTCATTGCTCTGTTCCTaGGCCTCACTCTTGTTTTCA +
Preference number: 5 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWSLLCS*ASLLFS
Trigger: TGAAAACAAGAGTGAGGCCAAGGAACAGAGCAATGA...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCCTGGCACTTCTCTGTaGGAGATGTTGATGAAGGAT +
Preference number: 5 (lower is better)
Translates to: KECKGRRKTKATGEKTACPGTSL*EMLMKD
Trigger: ATCCTTCATCAACATCTCCAACAGAGAAGTGCCAGG...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp CCTGTGAGGTACCATACCTCTGGACAGGGAGCTGAGGGAGACGGAGCTCTGTTTTTCTACTTAACTGCATaGTTCTCCAAGTCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: PVRYHTSGQGAEGDGALFFYLTA*FSKSLQ
Trigger: CTGGAGGGACTTGGAGAACAATGCAGTTAAGTAGAA...AAACAGAGCTCCGTCTCCCTCAGCTCCCTGTCCAGAGGTATGGTACCTCACAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR CAA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTCATCACTTCCATCTCTaGAGATGCCAGGTCACTACT +
Preference number: 5 (lower is better)
Translates to: LASQPARKGNVKESAYPAHHFHL*RCQVTT
Trigger: AGTAGTGACCTGGCATCTCAAGAGATGGAAGTGATG...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS TCA 90 bp GAAGTCAAAGAGCGACCACAGCTCTCGGAGGTTATTTTGCATCGGTaGGCCAGACAGAATGATCCGATGAGGGGTGCGAAACTGTTTGCA +
Preference number: 5 (lower is better)
Translates to: EVKERPQLSEVILHR*ARQNDPMRGAKLFA
Trigger: TGCAAACAGTTTCGCACCCCTCATCGGATCATTCTGTCTGGCTCACCGATGCAAAATAACCTCCGAGAGCTGTGGTCGCTCTTTGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355832.10
ENST00000623073.3
ENST00000623115.3
ENST00000681632.1
ENST00000681659.1
CDS TCA 90 bp AAAAACAGGGATCACCATGTACCTGCATCCTCCTCCAGACTGGCGTaGTCTAGTTCAATTTTCACCTCTGCTCCTCCAAGGATGGCCTGG +
Preference number: 5 (lower is better)
Translates to: KNRDHHVPASSSRLA*SSSIFTSAPPRMAW
Trigger: CCAGGCCATCCTTGGAGGAGCAGAGGTGAAAATTGAACTAGATCACGCCAGTCTGGAGGAGGATGCAGGTACATGGTGATCCCTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479652.1
CDS GCA 90 bp CCCAATCCCATTTCATCTCCCAGAATTCCTCCTGCCTGCTGGCAGTaGAATTCCCACAGCCACCTAACACCTGTCTGCTGGTACTTAAAA +
Preference number: 5 (lower is better)
Translates to: PNPISSPRIPPACWQ*NSHSHLTPVCWYLK
Trigger: TTTTAAGTACCAGCAGACAGGTGTTAGGTGGCTGTGGGAATTGCACTGCCAGCAGGCAGGAGGAATTCTGGGAGATGAAATGGGATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000475116.1
ENST00000681632.1
CDS-3UTR CAA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGATCACCACCACTTTCTaGCTTGATTGCCATTTCTTC +
Preference number: 5 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWITTTF*LDCHFF
Trigger: GAAGAAATGGCAATCAAGCAAGAAAGTGGTGGTGAT...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp GGGAAATACTCAGACTCTTCACCCTCAGAGTCTCCCTCTGCCTCTGGCCTCATGAAACGCTCCTCTTTTTaGGACAGAACTCTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: GKYSDSSPSESPSASGLMKRSSF*DRTLAF
Trigger: GAAAGCCAGAGTTCTGTCCAAAAAAGAGGAGCGTTT...CATGAGGCCAGAGGCAGAGGGAGACTCTGAGGGTGAAGAGTCTGAGTATTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR CAA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGCTCTTCTGGAGTTTCTaGATGTGCTTTTTCAAACGC +
Preference number: 5 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWLFWSF*MCFFKR
Trigger: GCGTTTGAAAAAGCACATCAAGAAACTCCAGAAGAG...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp AGAAGACAGCCTGCCAGCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCAGATGCATCACTGTTGTaGGACAGACAATTACAGTTG +
Preference number: 5 (lower is better)
Translates to: RRQPASLQTREAWSGVTSDASLL*DRQLQL
Trigger: CAACTGTAATTGTCTGTCCAACAACAGTGATGCATC...TGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp AGAAGACAGCCTGCCAGCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCAAAGAGATCAGGGTGGTaGCAAATTTTTCTTAGGGCT +
Preference number: 5 (lower is better)
Translates to: RRQPASLQTREAWSGVTSKRSGW*QIFLRA
Trigger: AGCCCTAAGAAAAATTTGCAACCACCCTGATCTCTT...TGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGAAGAGATCAGGGTGGTaGCAAATTTTTCTTAGGGCT +
Preference number: 5 (lower is better)
Translates to: ECKGRRKTKATGEKTACQKRSGW*QIFLRA
Trigger: AGCCCTAAGAAAAATTTGCAACCACCCTGATCTCTT...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTAGACCTTTGAGATTCTaGGGACCTCCAGAAAAGAGA +
Preference number: 5 (lower is better)
Translates to: LASQPARKGNVKESAYPARPLRF*GPPEKR
Trigger: TCTCTTTTCTGGAGGTCCCAAGAATCTCAAAGGTCT...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTAGACCTTTGAGATTCTaGGGACCTCCAGAAAAGAGA +
Preference number: 5 (lower is better)
Translates to: PARRHGNNVSDLHTETPPRPLRF*GPPEKR
Trigger: TCTCTTTTCTGGAGGTCCCAAGAATCTCAAAGGTCT...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTATGGATGTGTCCTCATaGTATCTCGTAATCAGTGGC +
Preference number: 5 (lower is better)
Translates to: PARRHGNNVSDLHTETPPMDVSS*YLVISG
Trigger: GCCACTGATTACGAGATACAATGAGGACACATCCAT...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp TGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGGTCCTGCAAAAATTGCACTaGTTTCAGTGCTCTGGGATG +
Preference number: 5 (lower is better)
Translates to: CRQERPGVVSLHGNNGWVLQKLH*FQCSGM
Trigger: CATCCCAGAGCACTGAAACAAGTGCAATTTTTGCAG...GACCCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp AGAAGACAGCCTGCCAGCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGTGATGCAGATAACTaGGATTCAAACTCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: RRQPASLQTREAWSGVTSCDADN*DSNSCS
Trigger: ACTGCAGGAGTTTGAATCCAAGTTATCTGCATCACA...TGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp CCTGTGAGGTACCATACCTCTGGACAGGGAGCTGAGGGAGACGGAGCTCTGTTTTGTGATGCAGATAACTaGGATTCAAACTCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: PVRYHTSGQGAEGDGALFCDADN*DSNSCS
Trigger: ACTGCAGGAGTTTGAATCCAAGTTATCTGCATCACA...AAACAGAGCTCCGTCTCCCTCAGCTCCCTGTCCAGAGGTATGGTACCTCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR CAA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGAGAGGAGGCTATACCTaGTCTAGCTCAATACAGTTT +
Preference number: 5 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWRGGYT*SSSIQF
Trigger: AAACTGTATTGAGCTAGACAAGGTATAGCCTCCTCT...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGAGAGGAGGCTATACCTaGTCTAGCTCAATACAGTTT +
Preference number: 5 (lower is better)
Translates to: ECKGRRKTKATGEKTACQRGGYT*SSSIQF
Trigger: AAACTGTATTGAGCTAGACAAGGTATAGCCTCCTCT...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS GCA 90 bp GACTGTCGGTATAAAGGCGACACAGCTCACACTCAGCCCTCTGTATaGCTCTTGCCCCAGCCTTCCCTTAAGTTTTTCATCTTAGACTTG +
Preference number: 5 (lower is better)
Translates to: DCRYKGDTAHTQPSV*LLPQPSLKFFILDL
Trigger: CAAGTCTAAGATGAAAAACTTAAGGGAAGGCTGGGGCAAGAGGCATACAGAGGGCTGAGTGTGAGCTGTGTCGCCTTTATACCGACAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680233.1
CDS CCA 90 bp TCCCAAAAGGAACCTGAGAGGGGGTTAAGACAACTAGATTCTGTGTaGCCCAGGAAAGGCAGCATACAATGTGCTGGGTGTTTCCTCATC +
Preference number: 5 (lower is better)
Translates to: SQKEPERGLRQLDSV*PRKGSIQCAGCFLI
Trigger: GATGAGGAAACACCCAGCACATTGTATGCTGCCTTTCCTGGGCCACACAGAATCTAGTTGTCTTAACCCCCTCTCAGGTTCCTTTTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623073.3
CDS CCA 90 bp AGACTTGAAATGCGCGGCAGTAGCACAGTGTTCAGTGGGCCACCATaGGGAGGCCTGCAATACAGATTATTTTTCCTGGCTCTCAGAAAA +
Preference number: 5 (lower is better)
Translates to: RLEMRGSSTVFSGPP*GGLQYRLFFLALRK
Trigger: TTTTCTGAGAGCCAGGAAAAATAATCTGTATTGCAGGCCTCCCCATGGTGGCCCACTGAACACTGTGCTACTGCCGCGCATTTCAAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680233.1
CDS-3UTR CAA 90 bp ATCTGGGTACCAAAAGGTGTCATCTGGCCAGTGCGGATGAGCTCTTCCCAGGCAATCACCACCACTTTCTaGCTTGATTGCCATTTCTTC +
Preference number: 5 (lower is better)
Translates to: IWVPKGVIWPVRMSSSQAITTTF*LDCHFF
Trigger: GAAGAAATGGCAATCAAGCAAGAAAGTGGTGGTGAT...TGCCTGGGAAGAGCTCATCCGCACTGGCCAGATGACACCTTTTGGTACCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR CAA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTAAACGCTCCTCTTTTTaGGACAGAACTCTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLKRSSF*DRTLAF
Trigger: GAAAGCCAGAGTTCTGTCCAAAAAAGAGGAGCGTTT...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTCTTCTTCCCCAGAACTaGGGAAAAAGTCATCATCAA +
Preference number: 5 (lower is better)
Translates to: LASQPARKGNVKESAYPALLPQN*GKSHHQ
Trigger: TTGATGATGACTTTTTCCCAAGTTCTGGGGAAGAAG...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTTTCAGACGTTTCTCTTaGTCCTGCAGTCTCAGTTTA +
Preference number: 5 (lower is better)
Translates to: PARRHGNNVSDLHTETPPFRRFS*SCSLSL
Trigger: TAAACTGAGACTGCAGGACAAAGAGAAACGTCTGAA...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp GCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCATGGTAACAACGGCTGGAAAACCGCCTTTGTTTaGGGTCTTTTAGCACTCTAT +
Preference number: 5 (lower is better)
Translates to: ACRQERPGVVSLHGNNGWKTAFV*GLLALY
Trigger: ATAGAGTGCTAAAAGACCCAAAACAAAGGCGGTTTT...CCAGCCGTTGTTACCATGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTCATTGCTCTGTTCCTaGGCCTCACTCTTGTTTTCA +
Preference number: 5 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLSLLCS*ASLLFS
Trigger: TGAAAACAAGAGTGAGGCCAAGGAACAGAGCAATGA...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTGTGATGCAGATAACTaGGATTCAAACTCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: LASQPARKGNVKESAYPACDADN*DSNSCS
Trigger: ACTGCAGGAGTTTGAATCCAAGTTATCTGCATCACA...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTAGAGGAGGCTATACCTaGTCTAGCTCAATACAGTTT +
Preference number: 5 (lower is better)
Translates to: LASQPARKGNVKESAYPARGGYT*SSSIQF
Trigger: AAACTGTATTGAGCTAGACAAGGTATAGCCTCCTCT...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp AGAAGACAGCCTGCCAGCCTGCAGACAAGAGAGGCCTGGAGTGGTGTCACTTCAGATAGTATTTGCTACTaGAAGAGGAGGCTATACCTT +
Preference number: 5 (lower is better)
Translates to: RRQPASLQTREAWSGVTSDSICY*KRRLYL
Trigger: AAGGTATAGCCTCCTCTTCAAGTAGCAAATACTATC...TGAAGTGACACCACTCCAGGCCTCTCTTGTCTGCAGGCTGGCAGGCTGTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS TCA 90 bp CCTTTTTGTGGGTATAGGAACCGGTTTCATGTAGAATTGCCACTCTaGACGGAGGCCACCACGTGTGAAATTCCTTCACCCACTGATGCA +
Preference number: 5 (lower is better)
Translates to: PFCGYRNRFHVELPL*TEATTCEIPSPTDA
Trigger: TGCATCAGTGGGTGAAGGAATTTCACACGTGGTGGCCTCCGTTCAGAGTGGCAATTCTACATGAAACCGGTTCCTATACCCACAAAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355832.10
ENST00000623073.3
ENST00000623318.1
ENST00000681632.1
ENST00000681659.1
CDS TCA 90 bp TATTTACATTCATCACGGGAGACTGGCCAGCCCTTAGAGACAACATaGACACATCTATCAGGCAGCATCCGGTCATCTCCAATGCTTGGC +
Preference number: 5 (lower is better)
Translates to: YLHSSRETGQPLETT*THLSGSIRSSPMLG
Trigger: GCCAAGCATTGGAGATGACCGGATGCTGCCTGATAGATGTGTTCATGTTGTCTCTAAGGGCTGGCCAGTCTCCCGTGATGAATGTAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623073.3
ENST00000679811.1
CDS-3UTR CAA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCAGCTCCTGAGTTTGACTaGAGTGGGGGATTCCCTCAT +
Preference number: 5 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSAPEFD*SGGFPH
Trigger: ATGAGGGAATCCCCCACTCAAGTCAAACTCAGGAGC...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp TGCCACTTGAAGCTGGAGGGGATAAGAAATGCTGGCATCTTGCCCCTCCCTGTGTTTGGATTTCGAATTTaGTGTCCTTCGTCCAAGATC +
Preference number: 5 (lower is better)
Translates to: CHLKLEGIRNAGILPLPVFGFRI*CPSSKI
Trigger: GATCTTGGACGAAGGACACAAAATTCGAAATCCAAA...CACAGGGAGGGGCAAGATGCCAGCATTTCTTATCCCCTCCAGCTTCAAGTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR CAA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTGGAATCAACGAAATTTaGGTAGACTTTATGCTGCTC +
Preference number: 5 (lower is better)
Translates to: PARRHGNNVSDLHTETPPGINEI*VDFMLL
Trigger: GAGCAGCATAAAGTCTACCAAAATTTCGTTGATTCC...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp CCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTAAGAGATCAGGGTGGTaGCAAATTTTTCTTAGGGCT +
Preference number: 5 (lower is better)
Translates to: PPSQQERGMSRRVHTLLLKRSGW*QIFLRA
Trigger: AGCCCTAAGAAAAATTTGCAACCACCCTGATCTCTT...AAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACTCATCAGGAAGACCTTaGAGATTCTTGGGACCTCCA +
Preference number: 5 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHSSGRP*RFLGPP
Trigger: TGGAGGTCCCAAGAATCTCAAAGGTCTTCCTGATGA...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp TTTGTCGGTGGTAGATCTTTTCTTCAATGGTGCCCGCAGTCAGGAGCCTGTACAGGAACTTCTTGCGTTTaGGAACATCATGGTCTGCTC +
Preference number: 5 (lower is better)
Translates to: FVGGRSFLQWCPQSGACTGTSCV*EHHGLL
Trigger: GAGCAGACCATGATGTTCCAAAACGCAAGAAGTTCC...TGTACAGGCTCCTGACTGCGGGCACCATTGAAGAAAAGATCTACCACCGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR CAA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTCCAAGCCTATCATaGCTAGTTACATTACTACTC +
Preference number: 5 (lower is better)
Translates to: LASQPARKGNVKESAYPASPSLS*LVTLLL
Trigger: GAGTAGTAATGTAACTAGCAATGATAGGCTTGGAGA...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCAGAGTTCTTAGGCTTTaGCTTTGGTCTCAGATGTTT +
Preference number: 5 (lower is better)
Translates to: KECKGRRKTKATGEKTACRVLRL*LWSQMF
Trigger: AAACATCTGAGACCAAAGCAAAAGCCTAAGAACTCT...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGTCCTGGGCCACTCGGTaGGCTTCTGCCTCCACCAGT +
Preference number: 5 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLSWATR*ASASTS
Trigger: ACTGGTGGAGGCAGAAGCCAACCGAGTGGCCCAGGA...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp GAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCCAGCAATTTACCAGTACCTaGAAAAGAGGATCTTTCCAA +
Preference number: 5 (lower is better)
Translates to: ECKGRRKTKATGEKTACQQFTST*KRGSFQ
Trigger: TTGGAAAGATCCTCTTTTCAAGGTACTGGTAAATTG...CTGGCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp TGCCACTTGAAGCTGGAGGGGATAAGAAATGCTGGCATCTTGCCCCTCCCTGTGGATAGTATTTGCTACTaGAAGAGGAGGCTATACCTT +
Preference number: 5 (lower is better)
Translates to: CHLKLEGIRNAGILPLPVDSICY*KRRLYL
Trigger: AAGGTATAGCCTCCTCTTCAAGTAGCAAATACTATC...CACAGGGAGGGGCAAGATGCCAGCATTTCTTATCCCCTCCAGCTTCAAGTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR CAA 90 bp CCTGTGAGGTACCATACCTCTGGACAGGGAGCTGAGGGAGACGGAGCTCTGTTTGAGGCAGACTATTGCTaGAACATTTTTAATGGTGAT +
Preference number: 5 (lower is better)
Translates to: PVRYHTSGQGAEGDGALFEADYC*NIFNGD
Trigger: ATCACCATTAAAAATGTTCAAGCAATAGTCTGCCTC...AAACAGAGCTCCGTCTCCCTCAGCTCCCTGTCCAGAGGTATGGTACCTCACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR CAA 90 bp CCAGCCAGGAGGCACGGTAACAATGTGTCAGATCTCCACACTGAGACACCACCTTTTATGGAGGGTGAATaGATGCAAGCAATTCTGCTA +
Preference number: 5 (lower is better)
Translates to: PARRHGNNVSDLHTETPPFMEGE*MQAILL
Trigger: TAGCAGAATTGCTTGCATCAATTCACCCTCCATAAA...AGGTGGTGTCTCAGTGTGGAGATCTGACACATTGTTACCGTGCCTCCTGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp ATAATCTTCATCTCCATCATCTCGGTATCTTCCCACTTTCCGACCTCCTCCTCCCTTTCCCCGAATAAATaGTTTGCACCCGTGACGACC +
Preference number: 5 (lower is better)
Translates to: IIFISIISVSSHFPTSSSLSPNK*FAPVTT
Trigger: GGTCGTCACGGGTGCAAACAATTTATTCGGGGAAAG...GGAGGAGGAGGTCGGAAAGTGGGAAGATACCGAGATGATGGAGATGAAGATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR CAA 90 bp GTAGTGAGATACAAACAGCCTTGGCTGGAATCCAAACCGCAGAAACAAGAAAGCGGGGGATTCCCTCATTaGGCATTCTCTACAGACCAG +
Preference number: 5 (lower is better)
Translates to: VVRYKQPWLESKPQKQESGGFPH*AFSTDQ
Trigger: CTGGTCTGTAGAGAATGCCAAATGAGGGAATCCCCC...GCTTTCTTGTTTCTGCGGTTTGGATTCCAGCCAAGGCTGTTTGTATCTCACTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR CAA 90 bp GAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTGCTCTATTGTAGTGTTCGAGGCATCTaGGGACTGCATCCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: EVTYRGAQNSKQTLLLYCSVRGI*GLHPPP
Trigger: TGGAGGAGGATGCAGTCCCAAGATGCCTCGAACACT...ACAATAGAGCAGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR CAA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGGGGGGATTCCCTCATTaGGCATTCTCTACAGACTAC +
Preference number: 5 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRGGFPH*AFSTDY
Trigger: GTAGTCTGTAGAGAATGCCAAATGAGGGAATCCCCC...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000355832.10
CDS-3UTR CAA 90 bp GAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTGCTCTATTGTGCTCCTGAGTTTGACTaGAGTGGGGGATTCCCTCAT +
Preference number: 5 (lower is better)
Translates to: EVTYRGAQNSKQTLLLYCAPEFD*SGGFPH
Trigger: ATGAGGGAATCCCCCACTCAAGTCAAACTCAGGAGC...ACAATAGAGCAGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR CAA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTCAATTTACCAGTACCTaGAAAAGAGGATCTTTCCAA +
Preference number: 5 (lower is better)
Translates to: LASQPARKGNVKESAYPAQFTST*KRGSFQ
Trigger: TTGGAAAGATCCTCTTTTCAAGGTACTGGTAAATTG...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp AAGGAATGCAAAGGCAGGCGCAAGACGAAGGCAACTGGAGAGAAGACAGCCTGCATACCAGAAAAGACTTaGAGGACAATCATTCTACCA +
Preference number: 5 (lower is better)
Translates to: KECKGRRKTKATGEKTACIPEKT*RTIILP
Trigger: TGGTAGAATGATTGTCCTCAAAGTCTTTTCTGGTAT...GCAGGCTGTCTTCTCTCCAGTTGCCTTCGTCTTGCGCCTGCCTTTGCATTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp TTGGCCTCCCAGCCAGCAAGAAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTATACCAGAAAAGACTTaGAGGACAATCATTCTACCA +
Preference number: 5 (lower is better)
Translates to: LASQPARKGNVKESAYPAIPEKT*RTIILP
Trigger: TGGTAGAATGATTGTCCTCAAAGTCTTTTCTGGTAT...AGCAGGGTATGCACTCTCCTTGACATTCCCCTTTCTTGCTGGCTGGGAGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS TCA 90 bp CCTGCAACAGAGAGAGAGAGACCTCTCAACGAGAATCCTTCCCAATaGCAAGCACTGACTATAAGAAACAAAGCTAGCTGGTCACTACCT +
Preference number: 5 (lower is better)
Translates to: PATERERPLNENPSQ*QALTIRNKASWSLP
Trigger: AGGTAGTGACCAGCTAGCTTTGTTTCTTATAGTCAGTGCTTGTCATTGGGAAGGATTCTCGTTGAGAGGTCTCTCTCTCTCTGTTGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS CCA 90 bp CCACCACGTGTGAAATTCCTTCACCCACTGATGCATCACTGTTGTTaGACAGACAATTACAGTTGGACCCAACCCCTCAAACCTGTAATT +
Preference number: 5 (lower is better)
Translates to: PPRVKFLHPLMHHCC*TDNYSWTQPLKPVI
Trigger: AATTACAGGTTTGAGGGGTTGGGTCCAACTGTAATTGTCTGTCCAACAACAGTGATGCATCAGTGGGTGAAGGAATTTCACACGTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355832.10
ENST00000623073.3
ENST00000623318.1
ENST00000681632.1
CDS CCA 90 bp ATGAGGGGTGCGAAACTGTTTGCAAGCAAGGGTGACAGCAGCATTTaGATTTCGAATTTTGTGTCCTTCGTCCAAGATCACATAGTGCCA +
Preference number: 5 (lower is better)
Translates to: MRGAKLFASKGDSSI*ISNFVSFVQDHIVP
Trigger: TGGCACTATGTGATCTTGGACGAAGGACACAAAATTCGAAATCCAAATGCTGCTGTCACCCTTGCTTGCAAACAGTTTCGCACCCCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355832.10
ENST00000623073.3
ENST00000623115.3
ENST00000681632.1
ENST00000681659.1
CDS CCA 90 bp GGTCTGCTCCAAAGGCTGGTTGAATCCTTCTTTTTAGATGGCATTTaGGTGTCTGAACATCTGATCCAGTTCCTGGGCTTTGCAATGTCT +
Preference number: 5 (lower is better)
Translates to: GLLQRLVESFFLDGI*VSEHLIQFLGFAMS
Trigger: AGACATTGCAAAGCCCAGGAACTGGATCAGATGTTCAGACACCCAAATGCCATCTAAAAAGAAGGATTCAACCAGCCTTTGGAGCAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679552.1
ENST00000679974.1
CDS-3UTR CAA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGAAACGCTCCTCTTTTTaGGACAGAACTCTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: KGECQGECIPCFFKGPIGKRSSF*DRTLAF
Trigger: GAAAGCCAGAGTTCTGTCCAAAAAAGAGGAGCGTTT...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCATCATCAGGAAGACCTTaGAGATTCTTGGGACCTCCA +
Preference number: 5 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSSSGRP*RFLGPP
Trigger: TGGAGGTCCCAAGAATCTCAAAGGTCTTCCTGATGA...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATCCTGCGTGTCCGTGCTaGGGTTCCAGTCTGGGTCAT +
Preference number: 5 (lower is better)
Translates to: IYIINPTILCRQSYTYRNPACPC*GSSLGH
Trigger: ATGACCCAGACTGGAACCCAAGCACGGACACGCAGG...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGCTGCAAAAATTGCACTaGTTTCAGTGCTCTGGGATG +
Preference number: 5 (lower is better)
Translates to: KGECQGECIPCFFKGPIGLQKLH*FQCSGM
Trigger: CATCCCAGAGCACTGAAACAAGTGCAATTTTTGCAG...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp TTTGTCGGTGGTAGATCTTTTCTTCAATGGTGCCCGCAGTCAGGAGCCTGTACACAGTTCCTGCAAAAATaGCACTTGTTTCAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: FVGGRSFLQWCPQSGACTQFLQK*HLFQCS
Trigger: AGAGCACTGAAACAAGTGCAATTTTTGCAGGAACTG...TGTACAGGCTCCTGACTGCGGGCACCATTGAAGAAAAGATCTACCACCGACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR CAA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACCTGTTCCTGAAGAATTaGAACATTCCCCATTTCCAC +
Preference number: 5 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHLFLKN*NIPHFH
Trigger: GTGGAAATGGGGAATGTTCAAATTCTTCAGGAACAG...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGTCCTGGGCCACTCGGTaGGCTTCTGCCTCCACCAGT +
Preference number: 5 (lower is better)
Translates to: ETFPYIICKLVKVALYIRSWATR*ASASTS
Trigger: ACTGGTGGAGGCAGAAGCCAACCGAGTGGCCCAGGA...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGTCTAGACCCCCTAACTaGGAAAGACCTGAAGAAGTT +
Preference number: 5 (lower is better)
Translates to: KGECQGECIPCFFKGPIGSRPPN*ERPEEV
Trigger: AACTTCTTCAGGTCTTTCCAAGTTAGGGGGTCTAGA...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS GCA 90 bp AACACTGAGCACACACACTTAAGACCAGTTACAGTTCTCAGCCTCTaGCTCCACATATTGTACACATGGAATTACTGGGCTGTTCCCAAT +
Preference number: 5 (lower is better)
Translates to: NTEHTHLRPVTVLSL*LHILYTWNYWAVPN
Trigger: ATTGGGAACAGCCCAGTAATTCCATGTGTACAATATGTGGAGGCAGAGGCTGAGAACTGTAACTGGTCTTAAGTGTGTGTGCTCAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS CCA 90 bp CCACCACGTGTGAAATTCCTTCACCCACTGATGCATCACTGTTGTTaGACAGACAATTACAGTTGGACCCAACCCCTCAAACTTAAAAAG +
Preference number: 5 (lower is better)
Translates to: PPRVKFLHPLMHHCC*TDNYSWTQPLKLKK
Trigger: CTTTTTAAGTTTGAGGGGTTGGGTCCAACTGTAATTGTCTGTCCAACAACAGTGATGCATCAGTGGGTGAAGGAATTTCACACGTGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS-3UTR CAA 90 bp AAAGGAGAGCAGTTCAAGACTGGCAGGCCAACTTCTCCTTCCTCAACACATCACCCACCACTTTCTTGCTaGATTGCCATTTCTTCATTA +
Preference number: 5 (lower is better)
Translates to: KGEQFKTGRPTSPSSTHHPPLSC*IAISSL
Trigger: TAATGAAGAAATGGCAATCAAGCAAGAAAGTGGTGG...GTGATGTGTTGAGGAAGGAGAAGTTGGCCTGCCAGTCTTGAACTGCTCTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCAGTCCAGATACTGCATTaGTCTCTTCTCCAAGCCTAT +
Preference number: 5 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSVQILH*SLLQAY
Trigger: ATAGGCTTGGAGAAGAGACAAATGCAGTATCTGGAC...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGGTCCAGATACTGCATTaGTCTCTTCTCCAAGCCTAT +
Preference number: 5 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRVQILH*SLLQAY
Trigger: ATAGGCTTGGAGAAGAGACAAATGCAGTATCTGGAC...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp AAACTTCAAGGAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTCTTTCCCCGAATAAATaGTTTGCACCCGTGACGACC +
Preference number: 5 (lower is better)
Translates to: KLQGGHLPWCSKFKTDLTLSPNK*FAPVTT
Trigger: GGTCGTCACGGGTGCAAACAATTTATTCGGGGAAAG...AGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTCCTTGAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS CCA 90 bp CAAGCAAGTCTCACCCTGGAAAGCAAAAAGGTTATCTATATTACCTaGCACTTCTCTGTTGGAGATGTTGATGAAGGATGCTGCACAGAG +
Preference number: 5 (lower is better)
Translates to: QASLTLESKKVIYIT*HFSVGDVDEGCCTE
Trigger: CTCTGTGCAGCATCCTTCATCAACATCTCCAACAGAGAAGTGCCAGGTAATATAGATAACCTTTTTGCTTTCCAGGGTGAGACTTGCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465653.1
ENST00000679552.1
CDS CCA 90 bp GCAGGATCCCCAAAAACTAGGGATAGTTACAAAGATAGCAAAGAGTaGCTCTTTCTTTCCACACAATACACGAAGGCCCTCAGATGGTAT +
Preference number: 5 (lower is better)
Translates to: AGSPKTRDSYKDSKE*LFLSTQYTKALRWY
Trigger: ATACCATCTGAGGGCCTTCGTGTATTGTGTGGAAAGAAAGAGCCACTCTTTGCTATCTTTGTAACTATCCCTAGTTTTTGGGGATCCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623073.3
CDS CCA 90 bp ACAGTTCTCAGCCTCTGCCTCCACATATTGTACACATGGAATTACTaGGCTGTTCCCAATATAAGGAATGGTAATGTCCTAGAGACCTCT +
Preference number: 5 (lower is better)
Translates to: TVLSLCLHILYTWNY*AVPNIRNGNVLETS
Trigger: AGAGGTCTCTAGGACATTACCATTCCTTATATTGGGAACAGCCCAGTAATTCCATGTGTACAATATGTGGAGGCAGAGGCTGAGAACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS-3UTR CAA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATGGGGTGCGAAACTGTTaGCAAGCAAGGGTGACAGCA +
Preference number: 5 (lower is better)
Translates to: IYIINPTILCRQSYTYRNGVRNC*QARVTA
Trigger: TGCTGTCACCCTTGCTTGCAAACAGTTTCGCACCCC...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGCTGTTCCTGAAGAATTaGAACATTCCCCATTTCCAC +
Preference number: 5 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRLFLKN*NIPHFH
Trigger: GTGGAAATGGGGAATGTTCAAATTCTTCAGGAACAG...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGAGAGTTCTTAGGCTTTaGCTTTGGTCTCAGATGTTT +
Preference number: 5 (lower is better)
Translates to: KGECQGECIPCFFKGPIGRVLRL*LWSQMF
Trigger: AAACATCTGAGACCAAAGCAAAAGCCTAAGAACTCT...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp TGTCTCTTCTCCAAGCCTATCATTGCTAGTTACATTACTACTCATGTGAGGGTCCGAGTTCCTTCAAACTaGGCGTCTCTGCAATGCTTA +
Preference number: 5 (lower is better)
Translates to: CLFSKPIIASYITTHVRVRVPSN*ASLQCL
Trigger: TAAGCATTGCAGAGACGCCAAGTTTGAAGGAACTCG...GACCCTCACATGAGTAGTAATGTAACTAGCAATGATAGGCTTGGAGAAGAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR CAA 90 bp TCTTCTTCTAGTTCATCATCAGGAAGACCTTTGAGATTCTTGGGACCTCCAGAACCTGGCACTTCTCTGTaGGAGATGTTGATGAAGGAT +
Preference number: 5 (lower is better)
Translates to: SSSSSSSGRPLRFLGPPEPGTSL*EMLMKD
Trigger: ATCCTTCATCAACATCTCCAACAGAGAAGTGCCAGG...TTCTGGAGGTCCCAAGAATCTCAAAGGTCTTCCTGATGATGAACTAGAAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR CAA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGACTGTTGGCAAGGGTTaGGAGAAATGGGTCCTTTTA +
Preference number: 5 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRTVGKG*EKWVLL
Trigger: TAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGT...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS TCA 90 bp AAAGTAATAAGGTTCCTTTTTCCCTTTGACTTCCTTAGAGCTAAGTaGGCTCTAAGTCAAGGAGACTTGAAATGCGCGGCAGTAGCACAG +
Preference number: 5 (lower is better)
Translates to: KVIRFLFPFDFLRAK*ALSQGDLKCAAVAQ
Trigger: CTGTGCTACTGCCGCGCATTTCAAGTCTCCTTGACTTAGAGCTCACTTAGCTCTAAGGAAGTCAAAGGGAAAAAGGAACCTTATTACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680233.1
CDS TCA 90 bp AACAACTTCACAGGTAATAAACGTGCACAGAAACGAAAGCTGTGCTaGGGGATGACAAATATAAGCCAGCCCTCATCTGTGCATTACTAC +
Preference number: 5 (lower is better)
Translates to: NNFTGNKRAQKRKLC*GMTNISQPSSVHYY
Trigger: GTAGTAATGCACAGATGAGGGCTGGCTTATATTTGTCATCCCTCAGCACAGCTTTCGTTTCTGTGCACGTTTATTACCTGTGAAGTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680233.1
CDS GCA 90 bp GCCCTCATCTGTGCATTACTACATAAGGTGCTACTAGAATGTGAGTaGCGCAACTCTAAAGAACAGGATTTAAGTCACAGGTCCTCAAAT +
Preference number: 5 (lower is better)
Translates to: ALICALLHKVLLECE*RNSKEQDLSHRSSN
Trigger: ATTTGAGGACCTGTGACTTAAATCCTGTTCTTTAGAGTTGCGGCACTCACATTCTAGTAGCACCTTATGTAGTAATGCACAGATGAGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680233.1
CDS CCA 90 bp GACCACTTTCAGTACCTGTGGGCTTTTCCTGTTCTTCCTCTCAAATaGACCCTGTACACTGTGGATAAGGAACAATATCATAGCTATACT +
Preference number: 5 (lower is better)
Translates to: DHFQYLWAFPVLPLK*TLYTVDKEQYHSYT
Trigger: AGTATAGCTATGATATTGTTCCTTATCCACAGTGTACAGGGTCCATTTGAGAGGAAGAACAGGAAAAGCCCACAGGTACTGAAAGTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679552.1
CDS CCA 90 bp AGACCAGTTACAGTTCTCAGCCTCTGCCTCCACATATTGTACACATaGAATTACTGGGCTGTTCCCAATATAAGGAATGGTAATGTCCTA +
Preference number: 5 (lower is better)
Translates to: RPVTVLSLCLHILYT*NYWAVPNIRNGNVL
Trigger: TAGGACATTACCATTCCTTATATTGGGAACAGCCCAGTAATTCCATGTGTACAATATGTGGAGGCAGAGGCTGAGAACTGTAACTGGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS-3UTR CAA 90 bp GAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTGCTCTATTGTATCACCACCACTTTCTaGCTTGATTGCCATTTCTTC +
Preference number: 5 (lower is better)
Translates to: EVTYRGAQNSKQTLLLYCITTTF*LDCHFF
Trigger: GAAGAAATGGCAATCAAGCAAGAAAGTGGTGGTGAT...ACAATAGAGCAGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR CAA 90 bp AACTGCAAAGCCCTCTTCTGGAGTTTCTTGATGTGCTTTTTCAAACGCTCCTCTCTCTTCTGGAGTTTCTaGATGTGCTTTTTCAAACGC +
Preference number: 5 (lower is better)
Translates to: NCKALFWSFLMCFFKRSSLFWSF*MCFFKR
Trigger: GCGTTTGAAAAAGCACATCAAGAAACTCCAGAAGAG...AGAGGAGCGTTTGAAAAAGCACATCAAGAAACTCCAGAAGAGGGCTTTGCAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR CAA 90 bp AACTGCAAAGCCCTCTTCTGGAGTTTCTTGATGTGCTTTTTCAAACGCTCCTCTCTTCTTCCCCAGAACTaGGGAAAAAGTCATCATCAA +
Preference number: 5 (lower is better)
Translates to: NCKALFWSFLMCFFKRSSLLPQN*GKSHHQ
Trigger: TTGATGATGACTTTTTCCCAAGTTCTGGGGAAGAAG...AGAGGAGCGTTTGAAAAAGCACATCAAGAAACTCCAGAAGAGGGCTTTGCAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR CAA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGGATGCATCACTGTTGTaGGACAGACAATTACAGTTG +
Preference number: 5 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRDASLL*DRQLQL
Trigger: CAACTGTAATTGTCTGTCCAACAACAGTGATGCATC...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp AATGTGTCAGATCTCCACACTGAGACACCACCTTCCCAAGATCATGGTACATCATTTGGATTTCGAATTTaGTGTCCTTCGTCCAAGATC +
Preference number: 5 (lower is better)
Translates to: NVSDLHTETPPSQDHGTSFGFRI*CPSSKI
Trigger: GATCTTGGACGAAGGACACAAAATTCGAAATCCAAA...TGATGTACCATGATCTTGGGAAGGTGGTGTCTCAGTGTGGAGATCTGACACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGGGGGTGCGAAACTGTTaGCAAGCAAGGGTGACAGCA +
Preference number: 5 (lower is better)
Translates to: ETFPYIICKLVKVALYIRGVRNC*QARVTA
Trigger: TGCTGTCACCCTTGCTTGCAAACAGTTTCGCACCCC...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp TTAGCAGTATTCTGGCTTGAGTTTCCAAATTCCTTCACCACCAGAAGTTCTATGGAAGCAGGGAACTTCTaGCGTTTTGGAACATCATGG +
Preference number: 5 (lower is better)
Translates to: LAVFWLEFPNSFTTRSSMEAGNF*RFGTSW
Trigger: CCATGATGTTCCAAAACGCAAGAAGTTCCCTGCTTC...CATAGAACTTCTGGTGGTGAAGGAATTTGGAAACTCAAGCCAGAATACTGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR CAA 90 bp ATACCCAAATGCTTCATGAGTGAACAAGGTCAGCAGATCACCCTGAGAACAAGGGATGGCATAGAAGTTTaGCCTGTTCCTGAAGAATTT +
Preference number: 5 (lower is better)
Translates to: IPKCFMSEQGQQITLRTRDGIEV*PVPEEF
Trigger: AAATTCTTCAGGAACAGGCAAAACTTCTATGCCATC...CCTTGTTCTCAGGGTGATCTGCTGACCTTGTTCACTCATGAAGCATTTGGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp AAAGGGGAATGTCAAGGAGAGTGCATACCCTGCTTCTTTAAAGGGCCAATTGGGGAGGCAGACTATTGCTaGAACATTTTTAATGGTGAT +
Preference number: 5 (lower is better)
Translates to: KGECQGECIPCFFKGPIGEADYC*NIFNGD
Trigger: ATCACCATTAAAAATGTTCAAGCAATAGTCTGCCTC...CCCAATTGGCCCTTTAAAGAAGCAGGGTATGCACTCTCCTTGACATTCCCCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp TTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGGAAAAGAAATGCTGGCATCTaGCCCCTCCCTGTGAGGTAC +
Preference number: 5 (lower is better)
Translates to: FPYIICKLVKVALYIRRKRNAGI*PLPVRY
Trigger: GTACCTCACAGGGAGGGGCAAGATGCCAGCATTTCT...TTTCCTCCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS TCA 90 bp ATTTACAATTCCAAGTGTAGTTTGCATTCCCTTTCCTGGATAGTGTaGTCTAGACCCCCTAACTTGGAAAGACCTGAAGAAGTTAAGGGG +
Preference number: 5 (lower is better)
Translates to: IYNSKCSLHSLSWIV*SRPPNLERPEEVKG
Trigger: CCCCTTAACTTCTTCAGGTCTTTCCAAGTTAGGGGGTCTAGATCACACTATCCAGGAAAGGGAATGCAAACTACACTTGGAATTGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS GCA 90 bp CACACCTATCCCTGTGTCAACCTTCTAATGGCAAAACAGAAATGCTaGTACGGATCTTGGGTTAAAGACTTTGTCTTTAGGAAATCAGCA +
Preference number: 5 (lower is better)
Translates to: HTYPCVNLLMAKQKC*YGSWVKDFVFRKSA
Trigger: TGCTGATTTCCTAAAGACAAAGTCTTTAACCCAAGATCCGTAGCAGCATTTCTGTTTTGCCATTAGAAGGTTGACACAGGGATAGGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465653.1
ENST00000679552.1
CDS GCA 90 bp CGACACACCTATCCCTGTGTCAACCTTCTAATGGCAAAACAGAAATaGTGCTACGGATCTTGGGTTAAAGACTTTGTCTTTAGGAAATCA +
Preference number: 5 (lower is better)
Translates to: RHTYPCVNLLMAKQK*CYGSWVKDFVFRKS
Trigger: TGATTTCCTAAAGACAAAGTCTTTAACCCAAGATCCGTAGCAGCATTTCTGTTTTGCCATTAGAAGGTTGACACAGGGATAGGTGTGTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465653.1
ENST00000679552.1
CDS GCA 90 bp ACCAACTCTAGAGAAAGATCTAAACTCCCAAAGAAATCGGTAGACTaGCACCTCAGCATCAGTGGTAGACTTGCTTCAGAATCATTACTT +
Preference number: 5 (lower is better)
Translates to: TNSRERSKLPKKSVD*HLSISGRLASESLL
Trigger: AAGTAATGATTCTGAAGCAAGTCTACCACTGATGCTGAGGTGGCAGTCTACCGATTTCTTTGGGAGTTTAGATCTTTCTCTAGAGTTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS-3UTR CAA 90 bp AACTGCAAAGCCCTCTTCTGGAGTTTCTTGATGTGCTTTTTCAAACGCTCCTCTCCACCACTTTCTTGCTaGATTGCCATTTCTTCATTA +
Preference number: 5 (lower is better)
Translates to: NCKALFWSFLMCFFKRSSPPLSC*IAISSL
Trigger: TAATGAAGAAATGGCAATCAAGCAAGAAAGTGGTGG...AGAGGAGCGTTTGAAAAAGCACATCAAGAAACTCCAGAAGAGGGCTTTGCAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679596.1
CDS-3UTR CAA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAAGGTCTCCTTGCCTTaGGCAATCCCACTTTCCCCT +
Preference number: 5 (lower is better)
Translates to: ETFPYIICKLVKVALYIRKVSLP*AIPLSP
Trigger: AGGGGAAAGTGGGATTGCCAAAGGCAAGGAGACCTT...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGAACTTCTTGCGTTTaGGAACATCATGGTCTGCTC +
Preference number: 5 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMGTSCV*EHHGLL
Trigger: GAGCAGACCATGATGTTCCAAAACGCAAGAAGTTCC...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp TTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGGTCCTTTTATGGAGGGATGGCATAGAAGTTTaGCCTGTTCCTGAAGAATTT +
Preference number: 5 (lower is better)
Translates to: LIPLTVGKGLEKWVLLWRDGIEV*PVPEEF
Trigger: AAATTCTTCAGGAACAGGCAAAACTTCTATGCCATC...CCTCCATAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp TTAGCAGTATTCTGGCTTGAGTTTCCAAATTCCTTCACCACCAGAAGTTCTATGTCATTGCTCTGTTCCTaGGCCTCACTCTTGTTTTCA +
Preference number: 5 (lower is better)
Translates to: LAVFWLEFPNSFTTRSSMSLLCS*ASLLFS
Trigger: TGAAAACAAGAGTGAGGCCAAGGAACAGAGCAATGA...CATAGAACTTCTGGTGGTGAAGGAATTTGGAAACTCAAGCCAGAATACTGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR CAA 90 bp GCCTCAGATTTCTCTTCAGATGATGTGGCATCATTTACAGATATGTTAGAAGCACATCACTTCCATCTCTaGAGATGCCAGGTCACTACT +
Preference number: 5 (lower is better)
Translates to: ASDFSSDDVASFTDMLEAHHFHL*RCQVTT
Trigger: AGTAGTGACCTGGCATCTCAAGAGATGGAAGTGATG...TGCTTCTAACATATCTGTAAATGATGCCACATCATCTGAAGAGAAATCTGAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR CAA 90 bp AAACTTCAAGGAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTCCACCACTTTCTTGCTaGATTGCCATTTCTTCATTA +
Preference number: 5 (lower is better)
Translates to: KLQGGHLPWCSKFKTDLTPPLSC*IAISSL
Trigger: TAATGAAGAAATGGCAATCAAGCAAGAAAGTGGTGG...AGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTCCTTGAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR CAA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATGAATCTAGTTTCCTGTaGATGTCTCTGCTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: IYIINPTILCRQSYTYRNESSFL*MSLLVA
Trigger: TGCCACCAGCAGAGACATCAACAGGAAACTAGATTC...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp GCATTCTGTAGTATGATAGGTTTTCTATTTCAGACAGCTAAGAATGCCTTACAGGAATCTAGTTTCCTGTaGATGTCTCTGCTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: AFCSMIGFLFQTAKNALQESSFL*MSLLVA
Trigger: TGCCACCAGCAGAGACATCAACAGGAAACTAGATTC...CTGTAAGGCATTCTTAGCTGTCTGAAATAGAAAACCTATCATACTACAGAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS-3UTR CAA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATCCTGTACACAGTCACTaGCTTCTTCTGGCCTATTCT +
Preference number: 5 (lower is better)
Translates to: IYIINPTILCRQSYTYRNPVHSH*LLLAYS
Trigger: AGAATAGGCCAGAAGAAGCAAGTGACTGTGTACAGG...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGCTGCAAAAATTGCACTaGTTTCAGTGCTCTGGGATG +
Preference number: 5 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMLQKLH*FQCSGM
Trigger: CATCCCAGAGCACTGAAACAAGTGCAATTTTTGCAG...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp TTAGCAGTATTCTGGCTTGAGTTTCCAAATTCCTTCACCACCAGAAGTTCTATGCTGTTCCTGAAGAATTaGAACATTCCCCATTTCCAC +
Preference number: 5 (lower is better)
Translates to: LAVFWLEFPNSFTTRSSMLFLKN*NIPHFH
Trigger: GTGGAAATGGGGAATGTTCAAATTCTTCAGGAACAG...CATAGAACTTCTGGTGGTGAAGGAATTTGGAAACTCAAGCCAGAATACTGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR CAA 90 bp TTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGGAAAGGAACAAGGACCACCTaGCTCCTACTGCATTATAGC +
Preference number: 5 (lower is better)
Translates to: FPYIICKLVKVALYIRRKGTRTT*LLLHYS
Trigger: GCTATAATGCAGTAGGAGCAAGGTGGTCCTTGTTCC...TTTCCTCCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATCATCACTTCCATCTCTaGAGATGCCAGGTCACTACT +
Preference number: 5 (lower is better)
Translates to: IYIINPTILCRQSYTYRNHHFHL*RCQVTT
Trigger: AGTAGTGACCTGGCATCTCAAGAGATGGAAGTGATG...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGACTGTTGGCAAGGGTTaGGAGAAATGGGTCCTTTTA +
Preference number: 5 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLTVGKG*EKWVLL
Trigger: TAAAAGGACCCATTTCTCCAAACCCTTGCCAACAGT...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS TCA 90 bp GTAGACTTGCTTCAGAATCATTACTTTAGATTGAATCCCATTTTGTaGGTTGATGGCTGTCATAAAGAACCAGCCTGTTTCCCGTCTGAA +
Preference number: 5 (lower is better)
Translates to: VDLLQNHYFRLNPIL*VDGCHKEPACFPSE
Trigger: TTCAGACGGGAAACAGGCTGGTTCTTTATGACAGCCATCAACTCACAAAATGGGATTCAATCTAAAGTAATGATTCTGAAGCAAGTCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS CCA 90 bp TGTGGGCTTTTCCTGTTCTTCCTCTCAAATGGACCCTGTACACTGTaGATAAGGAACAATATCATAGCTATACTTCCTTTTCTTCACTTT +
Preference number: 5 (lower is better)
Translates to: CGLFLFFLSNGPCTL*IRNNIIAILPFLHF
Trigger: AAAGTGAAGAAAAGGAAGTATAGCTATGATATTGTTCCTTATCCACAGTGTACAGGGTCCATTTGAGAGGAAGAACAGGAAAAGCCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679552.1
CDS-3UTR CAA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATATGGATGTGTCCTCATaGTATCTCGTAATCAGTGGC +
Preference number: 5 (lower is better)
Translates to: IYIINPTILCRQSYTYRNMDVSS*YLVISG
Trigger: GCCACTGATTACGAGATACAATGAGGACACATCCAT...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp TTAGCAGTATTCTGGCTTGAGTTTCCAAATTCCTTCACCACCAGAAGTTCTATGAAAACCGCCTTTGTTTaGGGTCTTTTAGCACTCTAT +
Preference number: 5 (lower is better)
Translates to: LAVFWLEFPNSFTTRSSMKTAFV*GLLALY
Trigger: ATAGAGTGCTAAAAGACCCAAAACAAAGGCGGTTTT...CATAGAACTTCTGGTGGTGAAGGAATTTGGAAACTCAAGCCAGAATACTGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS-3UTR CAA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGCAGTTCCTGCAAAAATaGCACTTGTTTCAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLQFLQK*HLFQCS
Trigger: AGAGCACTGAAACAAGTGCAATTTTTGCAGGAACTG...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGGAAGCAGGGAACTTCTaGCGTTTTGGAACATCATGG +
Preference number: 5 (lower is better)
Translates to: ETFPYIICKLVKVALYIREAGNF*RFGTSW
Trigger: CCATGATGTTCCAAAACGCAAGAAGTTCCCTGCTTC...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp AAACTTCAAGGAGGTCACCTACCGTGGTGCTCAAAATTCAAAACAGACCTTACTATGTTGCAAGGATCATaGTACACAGAGCAGTTTAAA +
Preference number: 5 (lower is better)
Translates to: KLQGGHLPWCSKFKTDLTMLQGS*YTEQFK
Trigger: TTTAAACTGCTCTGTGTACAATGATCCTTGCAACAT...AGTAAGGTCTGTTTTGAATTTTGAGCACCACGGTAGGTGACCTCCTTGAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS TCA 90 bp AAAGACTTTGTCTTTAGGAAATCAGCAGGTCCTTTTAGATTCAAGTaGATGTGCATCGTAAATCAGAGCGTGCAACACAAATATCAGGTG +
Preference number: 5 (lower is better)
Translates to: KDFVFRKSAGPFRFK*MCIVNQSVQHKYQV
Trigger: CACCTGATATTTGTGTTGCACGCTCTGATTTACGATGCACATTCACTTGAATCTAAAAGGACCTGCTGATTTCCTAAAGACAAAGTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465653.1
ENST00000679552.1
CDS TCA 90 bp ACATTCACATGTTACCTCATTGTATCTCGTAATCAGTGGCTGTCTTaGAGCTATTGTAGTGGTACCATCCATCTTGAGATAGGTATACTT +
Preference number: 5 (lower is better)
Translates to: TFTCYLIVSRNQWLS*SYCSGTIHLEIGIL
Trigger: AAGTATACCTATCTCAAGATGGATGGTACCACTACAATAGCTTCAAGACAGCCACTGATTACGAGATACAATGAGGTAACATGTGAATGT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS GCA 90 bp ATCTATATTACCTGGCACTTCTCTGTTGGAGATGTTGATGAAGGATaGTGCACAGAGAAGTTAGAATTCCTTTTCTTACCAAATCTACTC +
Preference number: 5 (lower is better)
Translates to: IYITWHFSVGDVDEG*CTEKLEFLFLPNLL
Trigger: GAGTAGATTTGGTAAGAAAAGGAATTCTAACTTCTCTGTGCAGCATCCTTCATCAACATCTCCAACAGAGAAGTGCCAGGTAATATAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465653.1
ENST00000679552.1
CDS GCA 90 bp AAACTACTTGCTCCTCTTCTGGCATACCCTAAGGGAAAATTTCTCTaGTGGTTCGTAAGACATGAAATTAGTCCTAGAAAAGATTCAGTA +
Preference number: 5 (lower is better)
Translates to: KLLAPLLAYPKGKFL*WFVRHEISPRKDSV
Trigger: TACTGAATCTTTTCTAGGACTAATTTCATGTCTTACGAACCAGCAGAGAAATTTTCCCTTAGGGTATGCCAGAAGAGGAGCAAGTAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000623073.3
ENST00000623788.1
CDS GCA 90 bp GACATTTGGCAATGTCTAAAGACATTTTTGTTACAACCAGAGAAGTaGAATAGTAGAGGCCAGAGAAGCTGTTCAATATCTGATACTGCA +
Preference number: 5 (lower is better)
Translates to: DIWQCLKTFLLQPEK*NSRGQRSCSISDTA
Trigger: TGCAGTATCAGATATTGAACAGCTTCTCTGGCCTCTACTATTGCACTTCTCTGGTTGTAACAAAAATGTCTTTAGACATTGCCAAATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623073.3
CDS CCA 90 bp AATCAGGTGAAATTTTCACAGCATTCAATCAAGCAAGTCTCACCCTaGAAAGCAAAAAGGTTATCTATATTACCTGGCACTTCTCTGTTG +
Preference number: 5 (lower is better)
Translates to: NQVKFSQHSIKQVSP*KAKRLSILPGTSLL
Trigger: CAACAGAGAAGTGCCAGGTAATATAGATAACCTTTTTGCTTTCCAGGGTGAGACTTGCTTGATTGAATGCTGTGAAAATTTCACCTGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465653.1
ENST00000679552.1
CDS-3UTR CAA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATATCACCACCACTTTCTaGCTTGATTGCCATTTCTTC +
Preference number: 5 (lower is better)
Translates to: IYIINPTILCRQSYTYRNITTTF*LDCHFF
Trigger: GAAGAAATGGCAATCAAGCAAGAAAGTGGTGGTGAT...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGACCTTTGAGATTCTaGGGACCTCCAGAAAAGAGA +
Preference number: 5 (lower is better)
Translates to: ETFPYIICKLVKVALYIRRPLRF*GPPEKR
Trigger: TCTCTTTTCTGGAGGTCCCAAGAATCTCAAAGGTCT...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp AATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATAGAAATGTCTTGAGAGTTCTTAGGCTTTaGCTTTGGTCTCAGATGTTT +
Preference number: 5 (lower is better)
Translates to: NPTILCRQSYTYRNRNVLRVLRL*LWSQMF
Trigger: AAACATCTGAGACCAAAGCAAAAGCCTAAGAACTCT...CAAGACATTTCTATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS GCA 90 bp TATATTACCTGGCACTTCTCTGTTGGAGATGTTGATGAAGGATGCTaGACAGAGAAGTTAGAATTCCTTTTCTTACCAAATCTACTCTTT +
Preference number: 5 (lower is better)
Translates to: YITWHFSVGDVDEGC*TEKLEFLFLPNLLF
Trigger: AAAGAGTAGATTTGGTAAGAAAAGGAATTCTAACTTCTCTGTGCAGCATCCTTCATCAACATCTCCAACAGAGAAGTGCCAGGTAATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465653.1
ENST00000679552.1
CDS-3UTR CAA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGCTCTTCTGGAGTTTCTaGATGTGCTTTTTCAAACGC +
Preference number: 5 (lower is better)
Translates to: ETFPYIICKLVKVALYIRLFWSF*MCFFKR
Trigger: GCGTTTGAAAAAGCACATCAAGAAACTCCAGAAGAG...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGTTCAGACGTTTCTCTTaGTCCTGCAGTCTCAGTTTA +
Preference number: 5 (lower is better)
Translates to: ETFPYIICKLVKVALYIRFRRFS*SCSLSL
Trigger: TAAACTGAGACTGCAGGACAAAGAGAAACGTCTGAA...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATGGAATCAACGAAATTTaGGTAGACTTTATGCTGCTC +
Preference number: 5 (lower is better)
Translates to: IYIINPTILCRQSYTYRNGINEI*VDFMLL
Trigger: GAGCAGCATAAAGTCTACCAAAATTTCGTTGATTCC...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp ATCTACATCATTAATCCAACAATTCTGTGCAGGCAGAGCTATACTTACAGGAATGATAGTATTTGCTACTaGAAGAGGAGGCTATACCTT +
Preference number: 5 (lower is better)
Translates to: IYIINPTILCRQSYTYRNDSICY*KRRLYL
Trigger: AAGGTATAGCCTCCTCTTCAAGTAGCAAATACTATC...ATTCCTGTAAGTATAGCTCTGCCTGCACAGAATTGTTGGATTAATGATGTAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp AAACAACCTATCGATATTGATACCACTTACTGTTGGCAAGGGTTTGGAGAAATGGAGGCAGACTATTGCTaGAACATTTTTAATGGTGAT +
Preference number: 5 (lower is better)
Translates to: KQPIDIDTTYCWQGFGEMEADYC*NIFNGD
Trigger: ATCACCATTAAAAATGTTCAAGCAATAGTCTGCCTC...CATTTCTCCAAACCCTTGCCAACAGTAAGTGGTATCAATATCGATAGGTTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000624341.3
ENST00000681659.1
CDS-3UTR CAA 90 bp TTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGAGGAAACCACCACTTTCTTGCTaGATTGCCATTTCTTCATTA +
Preference number: 5 (lower is better)
Translates to: FPYIICKLVKVALYIRRKPPLSC*IAISSL
Trigger: TAATGAAGAAATGGCAATCAAGCAAGAAAGTGGTGG...TTTCCTCCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS-3UTR CAA 90 bp GAAACATTTCCGTACATTATATGTAAATTGGTAAAGGTGGCCTTATACATCAGGTCTCCAAGCCTATCATaGCTAGTTACATTACTACTC +
Preference number: 5 (lower is better)
Translates to: ETFPYIICKLVKVALYIRSPSLS*LVTLLL
Trigger: GAGTAGTAATGTAACTAGCAATGATAGGCTTGGAGA...CCTGATGTATAAGGCCACCTTTACCAATTTACATATAATGTACGGAAATGTTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355832.10
ENST00000681659.1
CDS CAA 90 bp GCGAGCGCCCACAAGGAAACAGAGACGCTACCGCCGCCAGCCGCCTaGGAACCCAGCTCGACGGGCCGTGGCGCCTGCGCCCTCAGCTCA +
Preference number: 6 (lower is better)
Translates to: ASAHKETETLPPPAA*EPSSTGRGACALSS
Trigger: TGAGCTGAGGGCGCAGGCGCCACGGCCCGTCGAGCTGGGTTCCAAGGCGGCTGGCGGCGGTAGCGTCTCTGTTTCCTTGTGGGCGCTCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000447839.7
ENST00000680107.1
CDS GCA 72 bp GCCGCCTTGGAACCCAGCTCGACGGGCCGTGGCGCCTaGGCCCTCAGCTCAACCATAGACACCGCCCCCAAC +
Preference number: 6 (lower is better)
Translates to: AALEPSSTGRGA*ALSSTIDTAPN
Trigger: GTTGGGGGCGGTGTCTATGGTTGAGCTGAGGGCGCAGGCGCCACGGCCCGTCGAGCTGGGTTCCAAGGCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355832.10
ENST00000447839.7
ENST00000680107.1
CDS CAA 72 bp CACAAGGAAACAGAGACGCTACCGCCGCCAGCCGCCTaGGAACCCAGCTCGACGGGCCGTGGCGCCTGCGCC +
Preference number: 6 (lower is better)
Translates to: HKETETLPPPAA*EPSSTGRGACA
Trigger: GGCGCAGGCGCCACGGCCCGTCGAGCTGGGTTCCAAGGCGGCTGGCGGCGGTAGCGTCTCTGTTTCCTTGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355832.10
ENST00000447839.7
ENST00000680107.1
ENST00000681659.1
CDS GCA 72 bp ACCCTGCAGCTCAAGGGCCTGGGCGCTAGGCTCTACTaGCTGGATCTGATGTCGGTCGATGTGCAGCAGGGC +
Preference number: 6 (lower is better)
Translates to: TLQLKGLGARLY*LDLMSVDVQQG
Trigger: GCCCTGCTGCACATCGACCGACATCAGATCCAGGCAGTAGAGCCTAGCGCCCAGGCCCTTGAGCTGCAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000355832.10
ENST00000447839.7
ENST00000462247.1
ENST00000515869.1
ENST00000679596.1
ENST00000679811.1
ENST00000680107.1
ENST00000680233.1
ENST00000681632.1
ENST00000681659.1
CDS CCA 72 bp TCCTCGGAGCTGCTGATGCGCACCCCACAGCAGAGGTaGACAGCCCGTCACCCACAGAACGAAAGGAGAGGT +
Preference number: 6 (lower is better)
Translates to: SSELLMRTPQQR*TARHPQNERRG
Trigger: ACCTCTCCTTTCGTTCTGTGGGTGACGGGCTGTCCACCTCTGCTGTGGGGTGCGCATCAGCAGCTCCGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000355832.10
ENST00000447839.7
ENST00000462247.1
ENST00000515869.1
ENST00000679596.1
ENST00000679811.1
ENST00000680107.1
ENST00000680233.1
ENST00000681632.1
ENST00000681659.1
CDS CAA 72 bp GCTCCTGAGTTTGACTTGAGTGGGGGATTCCCTCATTaGGCATTCTCTACAGACCAGGGCCGCGCGAGCGCC +
Preference number: 6 (lower is better)
Translates to: APEFDLSGGFPH*AFSTDQGRASA
Trigger: GGCGCTCGCGCGGCCCTGGTCTGTAGAGAATGCCAAATGAGGGAATCCCCCACTCAAGTCAAACTCAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681659.1
CDS TCA 72 bp CGCCAGGCTGTGACCTCTCTTGTTGTCTCCCACGACTaGACACGGGAAGGATGGAGAGCTGTCCTGCTTCTC +
Preference number: 6 (lower is better)
Translates to: RQAVTSLVVSHD*TREGWRAVLLL
Trigger: GAGAAGCAGGACAGCTCTCCATCCTTCCCGTGTTCAGTCGTGGGAGACAACAAGAGAGGTCACAGCCTGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462247.1
ENST00000515869.1
CDS CCA 72 bp GCAGTCAGGAGCCTGTACACAGTCACTTGCTTCTTCTaGCCTATTCTCCATGCTCGCTCCCGGGCCTGCAAC +
Preference number: 6 (lower is better)
Translates to: AVRSLYTVTCFF*PILHARSRACN
Trigger: GTTGCAGGCCCGGGAGCGAGCATGGAGAATAGGCCAGAAGAAGCAAGTGACTGTGTACAGGCTCCTGACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS CAA 90 bp AGTCTCCCCTTAGGCCCCCTCCCAAGCCCAGATGTCAATGCTGCTTaGGTGGGTAAGGGTGTGGATACGCTTAGTCCTTTCCCTCCACGT +
Preference number: 6 (lower is better)
Translates to: SLPLGPLPSPDVNAA*VGKGVDTLSPFPPR
Trigger: ACGTGGAGGGAAAGGACTAAGCGTATCCACACCCTTACCCACCAAAGCAGCATTGACATCTGGGCTTGGGAGGGGGCCTAAGGGGAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS CCA 72 bp GCCCCCTCCCAAGCCCAGATGTCAATGCTGCTTTGGTaGGTAAGGGTGTGGATACGCTTAGTCCTTTCCCTC +
Preference number: 6 (lower is better)
Translates to: APSQAQMSMLLW*VRVWIRLVLSL
Trigger: GAGGGAAAGGACTAAGCGTATCCACACCCTTACCCACCAAAGCAGCATTGACATCTGGGCTTGGGAGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS CAA 72 bp GCTCCTGAGTTTGACTTGAGTGGGGGATTCCCTCATTaGGCATTCTCTACAGACTACCCAGGGCCGCGCGAG +
Preference number: 6 (lower is better)
Translates to: APEFDLSGGFPH*AFSTDYPGPRE
Trigger: CTCGCGCGGCCCTGGGTAGTCTGTAGAGAATGCCAAATGAGGGAATCCCCCACTCAAGTCAAACTCAGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355832.10
ENST00000447839.7
ENST00000679596.1
ENST00000679811.1
ENST00000680107.1
ENST00000680233.1
ENST00000681632.1
CDS GCA 72 bp TTCTTCTGGCCTATTCTCCATGCTCGCTCCCGGGCCTaGAACAGAGAGAGAGAGACCTCTCAACGAGAATCC +
Preference number: 6 (lower is better)
Translates to: FFWPILHARSRA*NRERETSQRES
Trigger: GGATTCTCGTTGAGAGGTCTCTCTCTCTCTGTTGCAGGCCCGGGAGCGAGCATGGAGAATAGGCCAGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS TCA 72 bp GAGCGACCACAGCTCTCGGAGGTTATTTTGCATCGGTaGGCCAGACAGAATGATCCGATGAGGGGTGCGAAA +
Preference number: 6 (lower is better)
Translates to: ERPQLSEVILHR*ARQNDPMRGAK
Trigger: TTTCGCACCCCTCATCGGATCATTCTGTCTGGCTCACCGATGCAAAATAACCTCCGAGAGCTGTGGTCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355832.10
ENST00000623073.3
ENST00000623115.3
ENST00000681632.1
ENST00000681659.1
CDS GCA 72 bp ATTTCATCTCCCAGAATTCCTCCTGCCTGCTGGCAGTaGAATTCCCACAGCCACCTAACACCTGTCTGCTGG +
Preference number: 6 (lower is better)
Translates to: ISSPRIPPACWQ*NSHSHLTPVCW
Trigger: CCAGCAGACAGGTGTTAGGTGGCTGTGGGAATTGCACTGCCAGCAGGCAGGAGGAATTCTGGGAGATGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355832.10
ENST00000475116.1
ENST00000623073.3
ENST00000623115.3
ENST00000623318.1
ENST00000681632.1
CDS CCA 72 bp ATGCGCGGCAGTAGCACAGTGTTCAGTGGGCCACCATaGGGAGGCCTGCAATACAGATTATTTTTCCTGGCT +
Preference number: 6 (lower is better)
Translates to: MRGSSTVFSGPP*GGLQYRLFFLA
Trigger: AGCCAGGAAAAATAATCTGTATTGCAGGCCTCCCCATGGTGGCCCACTGAACACTGTGCTACTGCCGCGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680233.1
CDS CCA 72 bp GCCCAGATGTCAATGCTGCTTTGGTGGGTAAGGGTGTaGATACGCTTAGTCCTTTCCCTCCACGTACAGCAG +
Preference number: 6 (lower is better)
Translates to: AQMSMLLWWVRV*IRLVLSLHVQQ
Trigger: CTGCTGTACGTGGAGGGAAAGGACTAAGCGTATCCACACCCTTACCCACCAAAGCAGCATTGACATCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS CAA 72 bp TTAGGCCCCCTCCCAAGCCCAGATGTCAATGCTGCTTaGGTGGGTAAGGGTGTGGATACGCTTAGTCCTTTC +
Preference number: 6 (lower is better)
Translates to: LGPLPSPDVNAA*VGKGVDTLSPF
Trigger: GAAAGGACTAAGCGTATCCACACCCTTACCCACCAAAGCAGCATTGACATCTGGGCTTGGGAGGGGGCCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS TCA 72 bp GCATTCTCTACAGACTACTTTTTGGTCGCCAGGCTGTaGCCTCTCTTGTTGTCTCCCACGACTGAACACGGG +
Preference number: 6 (lower is better)
Translates to: AFSTDYFLVARL*PLLLSPTTEHG
Trigger: CCCGTGTTCAGTCGTGGGAGACAACAAGAGAGGTCACAGCCTGGCGACCAAAAAGTAGTCTGTAGAGAATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462247.1
ENST00000515869.1
CDS TCA 72 bp AGGCATCTTGGGACTGCATCCTCCTCCAGACTGGCGTaGTCTAGTTCAATTTTCACCTCTGCTCCTCCAAGG +
Preference number: 6 (lower is better)
Translates to: RHLGTASSSRLA*SSSIFTSAPPR
Trigger: CCTTGGAGGAGCAGAGGTGAAAATTGAACTAGATCACGCCAGTCTGGAGGAGGATGCAGTCCCAAGATGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS CCA 72 bp GTTCGAGGCATCTTGGGACTGCATCCTCCTCCAGACTaGCGTGATCTAGTTCAATTTTCACCTCTGCTCCTC +
Preference number: 6 (lower is better)
Translates to: VRGILGLHPPPD*RDLVQFSPLLL
Trigger: GAGGAGCAGAGGTGAAAATTGAACTAGATCACGCCAGTCTGGAGGAGGATGCAGTCCCAAGATGCCTCGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680107.1
CDS TCA 72 bp GGGTATAGGAACCGGTTTCATGTAGAATTGCCACTCTaGACGGAGGCCACCACGTGTGAAATTCCTTCACCC +
Preference number: 6 (lower is better)
Translates to: GYRNRFHVELPL*TEATTCEIPSP
Trigger: GGGTGAAGGAATTTCACACGTGGTGGCCTCCGTTCAGAGTGGCAATTCTACATGAAACCGGTTCCTATACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355832.10
ENST00000623073.3
ENST00000623318.1
ENST00000681632.1
ENST00000681659.1
CDS TCA 72 bp GATCACCATGTACCTGCATCCTCCTCCAGACTGGCGTaGTCTAGTTCAATTTTCACCTCTGCTCCTCCAAGG +
Preference number: 6 (lower is better)
Translates to: DHHVPASSSRLA*SSSIFTSAPPR
Trigger: CCTTGGAGGAGCAGAGGTGAAAATTGAACTAGATCACGCCAGTCTGGAGGAGGATGCAGGTACATGGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479652.1
CDS CCA 72 bp ACAGGGATCACCATGTACCTGCATCCTCCTCCAGACTaGCGTGATCTAGTTCAATTTTCACCTCTGCTCCTC +
Preference number: 6 (lower is better)
Translates to: TGITMYLHPPPD*RDLVQFSPLLL
Trigger: GAGGAGCAGAGGTGAAAATTGAACTAGATCACGCCAGTCTGGAGGAGGATGCAGGTACATGGTGATCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479652.1
CDS CCA 72 bp GAACCTGAGAGGGGGTTAAGACAACTAGATTCTGTGTaGCCCAGGAAAGGCAGCATACAATGTGCTGGGTGT +
Preference number: 6 (lower is better)
Translates to: EPERGLRQLDSV*PRKGSIQCAGC
Trigger: ACACCCAGCACATTGTATGCTGCCTTTCCTGGGCCACACAGAATCTAGTTGTCTTAACCCCCTCTCAGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623073.3
CDS CAA 72 bp TTAACCACAGTAGCACTCAAGGCAAGCAGGGCATTCTaGAGCAGAGAAAGACAGGCACTCTGCTCTAGCAGC +
Preference number: 6 (lower is better)
Translates to: LTTVALKASRAF*SRERQALCSSS
Trigger: GCTGCTAGAGCAGAGTGCCTGTCTTTCTCTGCTCAAGAATGCCCTGCTTGCCTTGAGTGCTACTGTGGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679552.1
CDS CAA 90 bp GAGGCCACCACGTGTGAAATTCCTTCACCCACTGATGCATCACTGTaGTTGGACAGACAATTACAGTTGGACCCAACCCCTCAAACCTGT +
Preference number: 6 (lower is better)
Translates to: EATTCEIPSPTDASL*LDRQLQLDPTPQTC
Trigger: ACAGGTTTGAGGGGTTGGGTCCAACTGTAATTGTCTGTCCAACAACAGTGATGCATCAGTGGGTGAAGGAATTTCACACGTGGTGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355832.10
ENST00000623073.3
ENST00000623318.1
ENST00000681632.1
CDS TCA 72 bp CTCGGAGGTTATTTTGCATCGGTGAGCCAGACAGAATaGTCCGATGAGGGGTGCGAAACTGTTTGCAAGCAA +
Preference number: 6 (lower is better)
Translates to: LGGYFASVSQTE*SDEGCETVCKQ
Trigger: TTGCTTGCAAACAGTTTCGCACCCCTCATCGGATCATTCTGTCTGGCTCACCGATGCAAAATAACCTCCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355832.10
ENST00000623073.3
ENST00000623115.3
ENST00000681632.1
ENST00000681659.1
CDS CCA 72 bp GTTTTCTGGACTTTTATTTCAGAGGGTTGTGGTCTCTaGAGCTGGCACTTTCCCTCTAGACAAGGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: VFWTFISEGCGL*SWHFPSRQGRL
Trigger: CAGCCTGCCTTGTCTAGAGGGAAAGTGCCAGCTCCAGAGACCACAACCCTCTGAAATAAAAGTCCAGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465653.1
ENST00000679552.1
CDS CAA 72 bp GCTCCTGAGTTTGACTTGAGTGGGGGATTCCCTCATTaGGCATTCTCTACAGACTACTTTTTGGTCGCCAGG +
Preference number: 6 (lower is better)
Translates to: APEFDLSGGFPH*AFSTDYFLVAR
Trigger: CCTGGCGACCAAAAAGTAGTCTGTAGAGAATGCCAAATGAGGGAATCCCCCACTCAAGTCAAACTCAGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000462247.1
ENST00000515869.1
CDS CAA 90 bp CACCACACTGCCTCCATCCTACATGGGTCCAACAACTCTTTTTGCTaGGGGCTCATCAACTTAACTAAAGTAGGGAGAGTGCGGAAAGGA +
Preference number: 6 (lower is better)
Translates to: HHTASILHGSNNSFC*GLINLTKVGRVRKG
Trigger: TCCTTTCCGCACTCTCCCTACTTTAGTTAAGTTGATGAGCCCCAAGCAAAAAGAGTTGTTGGACCCATGTAGGATGGAGGCAGTGTGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623073.3
CDS TCA 72 bp TTATTTTGCATCGGTGAGCCAGACAGAATGATCCGATaGGGGGTGCGAAACTGTTTGCAAGCAAGGGTGACA +
Preference number: 6 (lower is better)
Translates to: LFCIGEPDRMIR*GVRNCLQARVT
Trigger: TGTCACCCTTGCTTGCAAACAGTTTCGCACCCCTCATCGGATCATTCTGTCTGGCTCACCGATGCAAAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000355832.10
ENST00000623073.3
ENST00000623115.3
ENST00000681632.1
ENST00000681659.1
CDS CCA 72 bp AAGAGACCAATCCCTCCTAGAGGGCAAACAGTGGACTaGTGGAAAACAACAGCCATAAATCACACTGTCAGG +
Preference number: 6 (lower is better)
Translates to: KRPIPPRGQTVD*WKTTAINHTVR
Trigger: CCTGACAGTGTGATTTATGGCTGTTGTTTTCCACCAGTCCACTGTTTGCCCTCTAGGAGGGATTGGTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623073.3
CDS CAA 90 bp GCCACCACGTGTGAAATTCCTTCACCCACTGATGCATCACTGTTGTaGGACAGACAATTACAGTTGGACCCAACCCCTCAAACCTGTAAT +
Preference number: 6 (lower is better)
Translates to: ATTCEIPSPTDASLL*DRQLQLDPTPQTCN
Trigger: ATTACAGGTTTGAGGGGTTGGGTCCAACTGTAATTGTCTGTCCAACAACAGTGATGCATCAGTGGGTGAAGGAATTTCACACGTGGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355832.10
ENST00000623073.3
ENST00000623318.1
ENST00000681632.1
CDS TCA 72 bp TTAGCTGTGTTTCCTTATCAGCTGAGTAGTCGTCCATaGGGAAGCAAGCTCCGAAGTTCTCACGTCATTGCT +
Preference number: 6 (lower is better)
Translates to: LAVFPYQLSSRP*GSKLRSSHVIA
Trigger: AGCAATGACGTGAGAACTTCGGAGCTTGCTTCCTCATGGACGACTACTCAGCTGATAAGGAAACACAGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479652.1
CDS TCA 72 bp GCTGGTCACTACCTGTCACTCCCAGAGTTAGAATTTTaGCTCATGACGTCAAGTACACCTAAGGCCTACTCA +
Preference number: 6 (lower is better)
Translates to: AGHYLSLPELEF*LMTSSTPKAYS
Trigger: TGAGTAGGCCTTAGGTGTACTTGACGTCATGAGTCAAAATTCTAACTCTGGGAGTGACAGGTAGTGACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS CAA 72 bp ACGTGTGAAATTCCTTCACCCACTGATGCATCACTGTaGTTGGACAGACAATTACAGTTGGACCCAACCCCT +
Preference number: 6 (lower is better)
Translates to: TCEIPSPTDASL*LDRQLQLDPTP
Trigger: AGGGGTTGGGTCCAACTGTAATTGTCTGTCCAACAACAGTGATGCATCAGTGGGTGAAGGAATTTCACACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355832.10
ENST00000623073.3
ENST00000623318.1
ENST00000681632.1
ENST00000681659.1
CDS CAA 72 bp ATGTCCAGCATCTGTTTGGAGGTGGGGGATAGGAGTTaGCAAAGCAAATACACATTCCCAGTGAGTGCTTCT +
Preference number: 6 (lower is better)
Translates to: MSSICLEVGDRS*QSKYTFPVSAS
Trigger: AGAAGCACTCACTGGGAATGTGTATTTGCTTTGCAAACTCCTATCCCCCACCTCCAAACAGATGCTGGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS TCA 72 bp AGAAATGGTAAACAGCATAGGATCCCAAAAGGAACCTaGGAGGGGGTTAAGACAACTAGATTCTGTGTGGCC +
Preference number: 6 (lower is better)
Translates to: RNGKQHRIPKGT*EGVKTTRFCVA
Trigger: GGCCACACAGAATCTAGTTGTCTTAACCCCCTCTCAGGTTCCTTTTGGGATCCTATGCTGTTTACCATTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623073.3
CDS TCA 72 bp GAATCACTACATTCTAGTCAGTTGACCTCTTTTTGCTaGGATACAGAACAACTGGACCAGCTCCTCCAGTCG +
Preference number: 6 (lower is better)
Translates to: ESLHSSQLTSFC*DTEQLDQLLQS
Trigger: CGACTGGAGGAGCTGGTCCAGTTGTTCTGTATCTCAGCAAAAAGAGGTCAACTGACTAGAATGTAGTGATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623073.3
CDS TCA 72 bp ACAGGTAATAAACGTGCACAGAAACGAAAGCTGTGCTaGGGGATGACAAATATAAGCCAGCCCTCATCTGTG +
Preference number: 6 (lower is better)
Translates to: TGNKRAQKRKLC*GMTNISQPSSV
Trigger: CACAGATGAGGGCTGGCTTATATTTGTCATCCCTCAGCACAGCTTTCGTTTCTGTGCACGTTTATTACCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680233.1
CDS TCA 72 bp GAGAGAGAGAGACCTCTCAACGAGAATCCTTCCCAATaGCAAGCACTGACTATAAGAAACAAAGCTAGCTGG +
Preference number: 6 (lower is better)
Translates to: ERERPLNENPSQ*QALTIRNKASW
Trigger: CCAGCTAGCTTTGTTTCTTATAGTCAGTGCTTGTCATTGGGAAGGATTCTCGTTGAGAGGTCTCTCTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS GCA 72 bp CACACACACTTAAGACCAGTTACAGTTCTCAGCCTCTaGCTCCACATATTGTACACATGGAATTACTGGGCT +
Preference number: 6 (lower is better)
Translates to: HTHLRPVTVLSL*LHILYTWNYWA
Trigger: AGCCCAGTAATTCCATGTGTACAATATGTGGAGGCAGAGGCTGAGAACTGTAACTGGTCTTAAGTGTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS CCA 72 bp GCGAAACTGTTTGCAAGCAAGGGTGACAGCAGCATTTaGATTTCGAATTTTGTGTCCTTCGTCCAAGATCAC +
Preference number: 6 (lower is better)
Translates to: AKLFASKGDSSI*ISNFVSFVQDH
Trigger: GTGATCTTGGACGAAGGACACAAAATTCGAAATCCAAATGCTGCTGTCACCCTTGCTTGCAAACAGTTTCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355832.10
ENST00000623073.3
ENST00000623115.3
ENST00000681632.1
ENST00000681659.1
CDS CCA 72 bp AGACTCCACCTAATGAAAAGGGAAAGGAGGAGGGTCTaGTATCTAAATCCTCCCACTGTTAAGAGACCGTTT +
Preference number: 6 (lower is better)
Translates to: RLHLMKRERRRV*YLNPPTVKRPF
Trigger: AAACGGTCTCTTAACAGTGGGAGGATTTAGATACCAGACCCTCCTCCTTTCCCTTTTCATTAGGTGGAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679552.1
CDS CAA 72 bp TGTGAAATTCCTTCACCCACTGATGCATCACTGTTGTaGGACAGACAATTACAGTTGGACCCAACCCCTCAA +
Preference number: 6 (lower is better)
Translates to: CEIPSPTDASLL*DRQLQLDPTPQ
Trigger: TTGAGGGGTTGGGTCCAACTGTAATTGTCTGTCCAACAACAGTGATGCATCAGTGGGTGAAGGAATTTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355832.10
ENST00000623073.3
ENST00000623318.1
ENST00000681632.1
ENST00000681659.1
CDS CAA 90 bp GTATGCCTCTTGCCCCAGCCTTCCCTTAAGTTTTTCATCTTAGACTaGCCTCCAAATCCAACTAAAGACCTAGAAGTACATGCATTTGGG +
Preference number: 6 (lower is better)
Translates to: VCLLPQPSLKFFILD*PPNPTKDLEVHAFG
Trigger: CCCAAATGCATGTACTTCTAGGTCTTTAGTTGGATTTGGAGGCAAGTCTAAGATGAAAAACTTAAGGGAAGGCTGGGGCAAGAGGCATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680233.1
CDS CAA 90 bp ACTTCAAGTATGTCCAGCATCTGTTTGGAGGTGGGGGATAGGAGTTaGCAAAGCAAATACACATTCCCAGTGAGTGCTTCTCTATTTGTG +
Preference number: 6 (lower is better)
Translates to: TSSMSSICLEVGDRS*QSKYTFPVSASLFV
Trigger: CACAAATAGAGAAGCACTCACTGGGAATGTGTATTTGCTTTGCAAACTCCTATCCCCCACCTCCAAACAGATGCTGGACATACTTGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS TCA 72 bp TCCAAGTGTAGTTTGCATTCCCTTTCCTGGATAGTGTaGTCTAGACCCCCTAACTTGGAAAGACCTGAAGAA +
Preference number: 6 (lower is better)
Translates to: SKCSLHSLSWIV*SRPPNLERPEE
Trigger: TTCTTCAGGTCTTTCCAAGTTAGGGGGTCTAGATCACACTATCCAGGAAAGGGAATGCAAACTACACTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS GCA 72 bp AGAGAAAGATCTAAACTCCCAAAGAAATCGGTAGACTaGCACCTCAGCATCAGTGGTAGACTTGCTTCAGAA +
Preference number: 6 (lower is better)
Translates to: RERSKLPKKSVD*HLSISGRLASE
Trigger: TTCTGAAGCAAGTCTACCACTGATGCTGAGGTGGCAGTCTACCGATTTCTTTGGGAGTTTAGATCTTTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS CCA 72 bp GAAAGACCAGAAAGACTTCCACTGAATGGTGGAATCTaGACTAGTTTTAACCACAGTAGCACTCAAGGCAAG +
Preference number: 6 (lower is better)
Translates to: ERPERLPLNGGI*TSFNHSSTQGK
Trigger: CTTGCCTTGAGTGCTACTGTGGTTAAAACTAGTCCAGATTCCACCATTCAGTGGAAGTCTTTCTGGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679552.1
CDS CCA 72 bp CAGTACCTGTGGGCTTTTCCTGTTCTTCCTCTCAAATaGACCCTGTACACTGTGGATAAGGAACAATATCAT +
Preference number: 6 (lower is better)
Translates to: QYLWAFPVLPLK*TLYTVDKEQYH
Trigger: ATGATATTGTTCCTTATCCACAGTGTACAGGGTCCATTTGAGAGGAAGAACAGGAAAAGCCCACAGGTACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679552.1
CDS CCA 72 bp ACAGTTCTCAGCCTCTGCCTCCACATATTGTACACATaGAATTACTGGGCTGTTCCCAATATAAGGAATGGT +
Preference number: 6 (lower is better)
Translates to: TVLSLCLHILYT*NYWAVPNIRNG
Trigger: ACCATTCCTTATATTGGGAACAGCCCAGTAATTCCATGTGTACAATATGTGGAGGCAGAGGCTGAGAACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS CAA 72 bp ACTGATGCATCACTGTTGTTGGACAGACAATTACAGTaGGACCCAACCCCTCAAACCTGTAATTTGAACCAC +
Preference number: 6 (lower is better)
Translates to: TDASLLLDRQLQ*DPTPQTCNLNH
Trigger: GTGGTTCAAATTACAGGTTTGAGGGGTTGGGTCCAACTGTAATTGTCTGTCCAACAACAGTGATGCATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355832.10
ENST00000623073.3
ENST00000623318.1
ENST00000681632.1
CDS CAA 72 bp GCTCTAAGGAATACTTCAAGTATGTCCAGCATCTGTTaGGAGGTGGGGGATAGGAGTTTGCAAAGCAAATAC +
Preference number: 6 (lower is better)
Translates to: ALRNTSSMSSIC*EVGDRSLQSKY
Trigger: GTATTTGCTTTGCAAACTCCTATCCCCCACCTCCAAACAGATGCTGGACATACTTGAAGTATTCCTTAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS CAA 72 bp AGACCAGTTACAGTTCTCAGCCTCTGCCTCCACATATaGTACACATGGAATTACTGGGCTGTTCCCAATATA +
Preference number: 6 (lower is better)
Translates to: RPVTVLSLCLHI*YTWNYWAVPNI
Trigger: TATATTGGGAACAGCCCAGTAATTCCATGTGTACAATATGTGGAGGCAGAGGCTGAGAACTGTAACTGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS CAA 90 bp TACTTTTGGGCTCTAAGGAATACTTCAAGTATGTCCAGCATCTGTTaGGAGGTGGGGGATAGGAGTTTGCAAAGCAAATACACATTCCCA +
Preference number: 6 (lower is better)
Translates to: YFWALRNTSSMSSIC*EVGDRSLQSKYTFP
Trigger: TGGGAATGTGTATTTGCTTTGCAAACTCCTATCCCCCACCTCCAAACAGATGCTGGACATACTTGAAGTATTCCTTAGAGCCCAAAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS CAA 90 bp CAGCAGCACCACTCAACTTCCCTGTTACATTCACATGTTACCTCATaGTATCTCGTAATCAGTGGCTGTCTTGAAGCTATTGTAGTGGTA +
Preference number: 6 (lower is better)
Translates to: QQHHSTSLLHSHVTS*YLVISGCLEAIVVV
Trigger: TACCACTACAATAGCTTCAAGACAGCCACTGATTACGAGATACAATGAGGTAACATGTGAATGTAACAGGGAAGTTGAGTGGTGCTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS CAA 90 bp ACACACTTAAGACCAGTTACAGTTCTCAGCCTCTGCCTCCACATATaGTACACATGGAATTACTGGGCTGTTCCCAATATAAGGAATGGT +
Preference number: 6 (lower is better)
Translates to: THLRPVTVLSLCLHI*YTWNYWAVPNIRNG
Trigger: ACCATTCCTTATATTGGGAACAGCCCAGTAATTCCATGTGTACAATATGTGGAGGCAGAGGCTGAGAACTGTAACTGGTCTTAAGTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS GCA 72 bp ACCTGGCACTTCTCTGTTGGAGATGTTGATGAAGGATaGTGCACAGAGAAGTTAGAATTCCTTTTCTTACCA +
Preference number: 6 (lower is better)
Translates to: TWHFSVGDVDEG*CTEKLEFLFLP
Trigger: TGGTAAGAAAAGGAATTCTAACTTCTCTGTGCAGCATCCTTCATCAACATCTCCAACAGAGAAGTGCCAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465653.1
ENST00000679552.1
CDS GCA 72 bp CCCTGTGTCAACCTTCTAATGGCAAAACAGAAATGCTaGTACGGATCTTGGGTTAAAGACTTTGTCTTTAGG +
Preference number: 6 (lower is better)
Translates to: PCVNLLMAKQKC*YGSWVKDFVFR
Trigger: CCTAAAGACAAAGTCTTTAACCCAAGATCCGTAGCAGCATTTCTGTTTTGCCATTAGAAGGTTGACACAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465653.1
ENST00000679552.1
CDS CCA 72 bp CATCTGACTTCATTCTCCGCAGTAGGTATGGATTTATaGTATCTCGTAAGACACATGCACACTTGTAAGCAG +
Preference number: 6 (lower is better)
Translates to: HLTSFSAVGMDL*YLVRHMHTCKQ
Trigger: CTGCTTACAAGTGTGCATGTGTCTTACGAGATACCATAAATCCATACCTACTGCGGAGAATGAAGTCAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355832.10
ENST00000623073.3
ENST00000623115.3
ENST00000681632.1
ENST00000681659.1
CDS CCA 72 bp AAATGTTCCTCAGTATTTACATTCATCACGGGAGACTaGCCAGCCCTTAGAGACAACATGAACACATCTATC +
Preference number: 6 (lower is better)
Translates to: KCSSVFTFITGD*PALRDNMNTSI
Trigger: GATAGATGTGTTCATGTTGTCTCTAAGGGCTGGCCAGTCTCCCGTGATGAATGTAAATACTGAGGAACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000623073.3
ENST00000679811.1
CDS CCA 72 bp CCAAAAACTAGGGATAGTTACAAAGATAGCAAAGAGTaGCTCTTTCTTTCCACACAATACACGAAGGCCCTC +
Preference number: 6 (lower is better)
Translates to: PKTRDSYKDSKE*LFLSTQYTKAL
Trigger: GAGGGCCTTCGTGTATTGTGTGGAAAGAAAGAGCCACTCTTTGCTATCTTTGTAACTATCCCTAGTTTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623073.3
CDS CCA 72 bp AGCCTCTGCCTCCACATATTGTACACATGGAATTACTaGGCTGTTCCCAATATAAGGAATGGTAATGTCCTA +
Preference number: 6 (lower is better)
Translates to: SLCLHILYTWNY*AVPNIRNGNVL
Trigger: TAGGACATTACCATTCCTTATATTGGGAACAGCCCAGTAATTCCATGTGTACAATATGTGGAGGCAGAGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS CAA 72 bp ACGAAGGCCCTCAGATGGTATTTAAAGGAAATTCACTaGCAGATTAAAAGCACTAGCCACACAGCTGGTAGA +
Preference number: 6 (lower is better)
Translates to: TKALRWYLKEIH*QIKSTSHTAGR
Trigger: TCTACCAGCTGTGTGGCTAGTGCTTTTAATCTGCAAGTGAATTTCCTTTAAATACCATCTGAGGGCCTTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623073.3
CDS TCA 72 bp GTTAAGGGGAGATTCATGGAGATGAATAGATGTGAATaGCTGAAGAACCTCCTGCATCTCTCCATTGAGAAT +
Preference number: 6 (lower is better)
Translates to: VKGRFMEMNRCE*LKNLLHLSIEN
Trigger: ATTCTCAATGGAGAGATGCAGGAGGTTCTTCAGTCATTCACATCTATTCATCTCCATGAATCTCCCCTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624341.3
CDS GCA 72 bp GCTCCTCTTCTGGCATACCCTAAGGGAAAATTTCTCTaGTGGTTCGTAAGACATGAAATTAGTCCTAGAAAA +
Preference number: 6 (lower is better)
Translates to: APLLAYPKGKFL*WFVRHEISPRK
Trigger: TTTTCTAGGACTAATTTCATGTCTTACGAACCAGCAGAGAAATTTTCCCTTAGGGTATGCCAGAAGAGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623073.3
ENST00000623788.1
CDS GCA 72 bp TGTGCATTACTACATAAGGTGCTACTAGAATGTGAGTaGCGCAACTCTAAAGAACAGGATTTAAGTCACAGG +
Preference number: 6 (lower is better)
Translates to: CALLHKVLLECE*RNSKEQDLSHR
Trigger: CCTGTGACTTAAATCCTGTTCTTTAGAGTTGCGGCACTCACATTCTAGTAGCACCTTATGTAGTAATGCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680233.1
CDS CAA 72 bp TTGCCCCAGCCTTCCCTTAAGTTTTTCATCTTAGACTaGCCTCCAAATCCAACTAAAGACCTAGAAGTACAT +
Preference number: 6 (lower is better)
Translates to: LPQPSLKFFILD*PPNPTKDLEVH
Trigger: ATGTACTTCTAGGTCTTTAGTTGGATTTGGAGGCAAGTCTAAGATGAAAAACTTAAGGGAAGGCTGGGGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680233.1
CDS TCA 72 bp TGTTACCTCATTGTATCTCGTAATCAGTGGCTGTCTTaGAGCTATTGTAGTGGTACCATCCATCTTGAGATA +
Preference number: 6 (lower is better)
Translates to: CYLIVSRNQWLS*SYCSGTIHLEI
Trigger: TATCTCAAGATGGATGGTACCACTACAATAGCTTCAAGACAGCCACTGATTACGAGATACAATGAGGTAACA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS CAA 72 bp CACTCAACTTCCCTGTTACATTCACATGTTACCTCATaGTATCTCGTAATCAGTGGCTGTCTTGAAGCTATT +
Preference number: 6 (lower is better)
Translates to: HSTSLLHSHVTS*YLVISGCLEAI
Trigger: AATAGCTTCAAGACAGCCACTGATTACGAGATACAATGAGGTAACATGTGAATGTAACAGGGAAGTTGAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS TCA 72 bp TGTCATCCTGCATCAATCGAATGTAGGAGTAAGATGTaGTCAAAATTCCATGACAATGAGCAACATCTCGAA +
Preference number: 6 (lower is better)
Translates to: CHPASIECRSKM*SKFHDNEQHLE
Trigger: TTCGAGATGTTGCTCATTGTCATGGAATTTTGATCACATCTTACTCCTACATTCGATTGATGCAGGATGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000355832.10
ENST00000475116.1
ENST00000623073.3
ENST00000623115.3
ENST00000623318.1
ENST00000681632.1
ENST00000681659.1
CDS CAA 72 bp GAGAATCCTGTAAACTTCTTTGGAATCAACGAAATTTaGGTAGACTTTATGCTGCTCATCTGTAAGACGGCA +
Preference number: 6 (lower is better)
Translates to: ENPVNFFGINEI*VDFMLLICKTA
Trigger: TGCCGTCTTACAGATGAGCAGCATAAAGTCTACCAAAATTTCGTTGATTCCAAAGAAGTTTACAGGATTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355832.10
ENST00000623115.3
ENST00000681632.1
ENST00000681659.1
CDS CAA 72 bp AACAGAAATGCTGCTACGGATCTTGGGTTAAAGACTTaGTCTTTAGGAAATCAGCAGGTCCTTTTAGATTCA +
Preference number: 6 (lower is better)
Translates to: NRNAATDLGLKT*SLGNQQVLLDS
Trigger: TGAATCTAAAAGGACCTGCTGATTTCCTAAAGACAAAGTCTTTAACCCAAGATCCGTAGCAGCATTTCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465653.1
ENST00000679552.1
CDS CAA 72 bp ATTGGTGTACATTGGCATTGCCACACTAACCCAAGATaGCATTTACTAGTGTGGCTGAAAATAAGGTCAAAA +
Preference number: 6 (lower is better)
Translates to: IGVHWHCHTNPR*HLLVWLKIRSK
Trigger: TTTTGACCTTATTTTCAGCCACACTAGTAAATGCAATCTTGGGTTAGTGTGGCAATGCCAATGTACACCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623073.3
CDS TCA 72 bp CTTCAGAATCATTACTTTAGATTGAATCCCATTTTGTaGGTTGATGGCTGTCATAAAGAACCAGCCTGTTTC +
Preference number: 6 (lower is better)
Translates to: LQNHYFRLNPIL*VDGCHKEPACF
Trigger: GAAACAGGCTGGTTCTTTATGACAGCCATCAACTCACAAAATGGGATTCAATCTAAAGTAATGATTCTGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681632.1
CDS GCA 72 bp CAAAAATGCAGACTCAACTTGATCCTTGAGGATATCTaGCAAATCACTTACTACAAATACACAGAAGTATCC +
Preference number: 6 (lower is better)
Translates to: QKCRLNLILEDI*QITYYKYTEVS
Trigger: GGATACTTCTGTGTATTTGTAGTAAGTGATTTGGCAGATATCCTCAAGGATCAAGTTGAGTCTGCATTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623073.3
CDS CCA 72 bp AAATTTTCACAGCATTCAATCAAGCAAGTCTCACCCTaGAAAGCAAAAAGGTTATCTATATTACCTGGCACT +
Preference number: 6 (lower is better)
Translates to: KFSQHSIKQVSP*KAKRLSILPGT
Trigger: AGTGCCAGGTAATATAGATAACCTTTTTGCTTTCCAGGGTGAGACTTGCTTGATTGAATGCTGTGAAAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465653.1
ENST00000679552.1
CDS CAA 90 bp GAATCTATAAAGGAGACCAAACTTAATCATCTCGAACAAAGAACTTaGCATCCTGCTCCCAACTACAAATTGATTATACAAAAGAGACAG +
Preference number: 6 (lower is better)
Translates to: ESIKETKLNHLEQRT*HPAPNYKLIIQKRQ
Trigger: CTGTCTCTTTTGTATAATCAATTTGTAGTTGGGAGCAGGATGCAAAGTTCTTTGTTCGAGATGATTAAGTTTGGTCTCCTTTATAGATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000623073.3
ENST00000679811.1