RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ERC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000082805

Ensembl transcript IDs: ENST00000347735.10, ENST00000355446.9, ENST00000360905.9, ENST00000397203.6, ENST00000440394.7, ENST00000536573.6, ENST00000538971.6, ENST00000539007.5, ENST00000539802.2, ENST00000541503.1, ENST00000542302.6, ENST00000543086.7, ENST00000543151.1, ENST00000543263.2, ENST00000544277.1, ENST00000545318.2, ENST00000545948.5, ENST00000546231.6, ENST00000587595.1, ENST00000588412.5, ENST00000589028.5, ENST00000589132.1, ENST00000592048.5, ENST00000611180.4

Found 2952 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGTCCACGTGGGTGGGATCTGGGCCACCTGCTTGGAGAGAGCAGCTaGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCC +
Preference number: 1 (lower is better)
Translates to: SPRGWDLGHLLGESS*PVPVPDHLFRHGLA
Trigger: GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTCTCCAAGCAGGTGGCCCAGATCCCACCCACGTGGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR GCA 90 bp CCTGAGCAGCCCAGGGCTGGCAGTGATGGACGGGCGGCCTCACTCTaGAGAGGGTGCCTGCTGCATTGCAGTCTCTTCTCATCCTTCCTC +
Preference number: 1 (lower is better)
Translates to: PEQPRAGSDGRAASL*RGCLLHCSLFSSFL
Trigger: GAGGAAGGATGAGAAGAGACTGCAATGCAGCAGGCACCCTCTGCAGAGTGAGGCCGCCCGTCCATCACTGCCAGCCCTGGGCTGCTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR GCA 90 bp GCAGGTGTCTCTTGCCCAGGCAGGCACTACCCTAAGTGTGCTCCATaGTTCCTAAGCCGCCAGCCCAGGGCCACCTATGCCAGCCTGGGA +
Preference number: 1 (lower is better)
Translates to: AGVSCPGRHYPKCAP*FLSRQPRATYASLG
Trigger: TCCCAGGCTGGCATAGGTGGCCCTGGGCTGGCGGCTTAGGAAGCATGGAGCACACTTAGGGTAGTGCCTGCCTGGGCAAGAGACACCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR GCA 90 bp TCTTCTGACGCATCAGGGAGCAGTCACAGGCCCCACTGGATATCCTaGAATGCCCGGCAGGTGCCTGGGCTAGTCCTGCGATGGGCCAGC +
Preference number: 1 (lower is better)
Translates to: SSDASGSSHRPHWIS*NARQVPGLVLRWAS
Trigger: GCTGGCCCATCGCAGGACTAGCCCAGGCACCTGCCGGGCATTGCAGGATATCCAGTGGGGCCTGTGACTGCTCCCTGATGCGTCAGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CCA 90 bp CTGCAGGAGCTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTaGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGGGCATCTGT +
Preference number: 1 (lower is better)
Translates to: LQELRTRVLARQAAS*RCSGETSPRATGIC
Trigger: ACAGATGCCCGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR CCA 90 bp CCTGGATTGCAGGCTCCAGGCTGGCCAGTGCTCACCCGTGCTGGGTaGTCACTGGAAGAGATAGCACCAAGTGGGCAGGAGAGGTCCTGT +
Preference number: 1 (lower is better)
Translates to: PGLQAPGWPVLTRAG*SLEEIAPSGQERSC
Trigger: ACAGGACCTCTCCTGCCCACTTGGTGCTATCTCTTCCAGTGACCACCCAGCACGGGTGAGCACTGGCCAGCCTGGAGCCTGCAATCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CCA 90 bp TCCACCTGGATTGCAGGCTCCAGGCTGGCCAGTGCTCACCCGTGCTaGGTGGTCACTGGAAGAGATAGCACCAAGTGGGCAGGAGAGGTC +
Preference number: 1 (lower is better)
Translates to: STWIAGSRLASAHPC*VVTGRDSTKWAGEV
Trigger: GACCTCTCCTGCCCACTTGGTGCTATCTCTTCCAGTGACCACCCAGCACGGGTGAGCACTGGCCAGCCTGGAGCCTGCAATCCAGGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR GCA 90 bp TCACAACTTCAGCAGCCACTGGGCTGCAGGAGCTCAGGACACGGGTaGTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCA +
Preference number: 1 (lower is better)
Translates to: SQLQQPLGCRSSGHG*WQGRQPLGGVQGKP
Trigger: TGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGCCCAGTGGCTGCTGAAGTTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR TCA 90 bp CCCAAGCCGCCTGGTCATCGTCCAAGTTATAGGAAGCTGGTGGAGTaGGTCCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTG +
Preference number: 1 (lower is better)
Translates to: PKPPGHRPSYRKLVE*VHGGSGGLGHGRGL
Trigger: CAACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGGACTCACTCCACCAGCTTCCTATAACTTGGACGATGACCAGGCGGCTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR GCA 90 bp AAGCCAGAAGGAACTGACATGGAGGACAGTCTGTTCCACCTGGATTaGAGGCTCCAGGCTGGCCAGTGCTCACCCGTGCTGGGTGGTCAC +
Preference number: 1 (lower is better)
Translates to: KPEGTDMEDSLFHLD*RLQAGQCSPVLGGH
Trigger: GTGACCACCCAGCACGGGTGAGCACTGGCCAGCCTGGAGCCTGCAATCCAGGTGGAACAGACTGTCCTCCATGTCAGTTCCTTCTGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR GCA 90 bp GAGTGGGTGGTGCTGCCCTCAGGATGTGTAGCTGCAGTAGATGGATaGAATACTGGCGTGGTGTGGAATGAGGGGCTGGACCCAGAGGGC +
Preference number: 1 (lower is better)
Translates to: EWVVLPSGCVAAVDG*NTGVVWNEGLDPEG
Trigger: GCCCTCTGGGTCCAGCCCCTCATTCCACACCACGCCAGTATTGCATCCATCTACTGCAGCTACACATCCTGAGGGCAGCACCACCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CCA 90 bp CAACACTTCTCTTCTGACGCATCAGGGAGCAGTCACAGGCCCCACTaGATATCCTGCAATGCCCGGCAGGTGCCTGGGCTAGTCCTGCGA +
Preference number: 1 (lower is better)
Translates to: QHFSSDASGSSHRPH*ISCNARQVPGLVLR
Trigger: TCGCAGGACTAGCCCAGGCACCTGCCGGGCATTGCAGGATATCCAGTGGGGCCTGTGACTGCTCCCTGATGCGTCAGAAGAGAAGTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR GCA 90 bp GCAATACTGGCGTGGTGTGGAATGAGGGGCTGGACCCAGAGGGCCTaGTTTGGCCGGGGTGAATTCTCTGGCTTCAGTAGGGTTCACTTC +
Preference number: 1 (lower is better)
Translates to: AILAWCGMRGWTQRA*FGRGEFSGFSRVHF
Trigger: GAAGTGAACCCTACTGAAGCCAGAGAATTCACCCCGGCCAAAGCAGGCCCTCTGGGTCCAGCCCCTCATTCCACACCACGCCAGTATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CCA 90 bp ATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTATAGGAAGCTGGTaGAGTGAGTCCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAG +
Preference number: 1 (lower is better)
Translates to: ILPSRLVIVQVIGSW*SESTEDQGVSVMAE
Trigger: CTCTGCCATGACCGAGACCCCCTGATCCTCCGTGGACTCACTCCACCAGCTTCCTATAACTTGGACGATGACCAGGCGGCTTGGGAGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR CCA 90 bp CTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTATAGGAAGCTaGTGGAGTGAGTCCACGGAGGATCAGGGGGTCTCGGTCATGGCA +
Preference number: 1 (lower is better)
Translates to: LILPSRLVIVQVIGS*WSESTEDQGVSVMA
Trigger: TGCCATGACCGAGACCCCCTGATCCTCCGTGGACTCACTCCACCAGCTTCCTATAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR TCA 90 bp AGGCTGAGGTTCAGAGAAGACGAGTCAAGGGCAAAGCTAGCAGGGTaGGTGAGGGATCACAACTTCAGCAGCCACTGGGCTGCAGGAGCT +
Preference number: 1 (lower is better)
Translates to: RLRFREDESRAKLAG*VRDHNFSSHWAAGA
Trigger: AGCTCCTGCAGCCCAGTGGCTGCTGAAGTTGTGATCCCTCACTCACCCTGCTAGCTTTGCCCTTGACTCGTCTTCTCTGAACCTCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR TCA 90 bp ATGTGTAGCTGCAGTAGATGGATGCAATACTGGCGTGGTGTGGAATaGGGGGCTGGACCCAGAGGGCCTGCTTTGGCCGGGGTGAATTCT +
Preference number: 1 (lower is better)
Translates to: MCSCSRWMQYWRGVE*GAGPRGPALAGVNS
Trigger: AGAATTCACCCCGGCCAAAGCAGGCCCTCTGGGTCCAGCCCCTCATTCCACACCACGCCAGTATTGCATCCATCTACTGCAGCTACACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CCA 90 bp CAGGAGAGACTGGTGGAGAACACCTCACACCATCTTCTTGTTAACTaGCCGAGGAACAGAGTGAGGAAGGCTGCGACAGACAGGCAGGGC +
Preference number: 1 (lower is better)
Translates to: QERLVENTSHHLLVN*PRNRVRKAATDRQG
Trigger: GCCCTGCCTGTCTGTCGCAGCCTTCCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGGTGTTCTCCACCAGTCTCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
3UTR CCA 90 bp AGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGGGCATCTGTTACTaGGGCAAAGCTGCAGGCGGGGACAACAGGGTCTCATATGTCAAC +
Preference number: 1 (lower is better)
Translates to: RCSGETSPRATGICY*GKAAGGDNRVSYVN
Trigger: GTTGACATATGAGACCCTGTTGTCCCCGCCTGCAGCTTTGCCCCAGTAACAGATGCCCGTTGCTCTTGGGCTGGTTTCCCCTGAACACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR TCA 90 bp TCCAAGTCCATTCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTaGGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGCCAC +
Preference number: 1 (lower is better)
Translates to: SKSIPGFILMSEDRR*EAPLLHGSLSGQSH
Trigger: GTGGCTCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGAATGGACTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
3UTR TCA 90 bp GATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATCGTaGGGCCTGCTCACAGCTCCCCGGTACAAAGCATCTCATGTGGAA +
Preference number: 1 (lower is better)
Translates to: DEDSDLGRTSAPKPS*GLLTAPRYKASHVE
Trigger: TTCCACATGAGATGCTTTGTACCGGGGAGCTGTGAGCAGGCCTCACGATGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
3UTR TCA 90 bp TATCCTGTCAGTAACACAACTCCAGCAGGAACACACACATACAGCTaGAGGCAGCGGGTGCACGTGCATCCCAGACACCACCATGGAGGC +
Preference number: 1 (lower is better)
Translates to: YPVSNTTPAGTHTYS*RQRVHVHPRHHHGG
Trigger: GCCTCCATGGTGGTGTCTGGGATGCACGTGCACCCGCTGCCTTCAGCTGTATGTGTGTGTTCCTGCTGGAGTTGTGTTACTGACAGGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR GCA 90 bp ACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATCGTGAGGCCTaGTCACAGCTCCCCGGTACAAAGCATCTCATGTGGAAAGTAAGC +
Preference number: 1 (lower is better)
Translates to: TQTLGERVLPSHREA*SQLPGTKHLMWKVS
Trigger: GCTTACTTTCCACATGAGATGCTTTGTACCGGGGAGCTGTGAGCAGGCCTCACGATGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
3UTR CCA 90 bp CATGGTCAACAGGAGGGCGGGATGGTTCTGGGAGGAACAGGACTCTaGCAGCAAATCCAAATGCCAGTGGATGGGCGGCTCAGAAACATT +
Preference number: 1 (lower is better)
Translates to: HGQQEGGMVLGGTGL*QQIQMPVDGRLRNI
Trigger: AATGTTTCTGAGCCGCCCATCCACTGGCATTTGGATTTGCTGCCAGAGTCCTGTTCCTCCCAGAACCATCCCGCCCTCCTGTTGACCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CCA 90 bp ACACCGGGCCTACACTCAAGTAACATGGTCAACAGGAGGGCGGGATaGTTCTGGGAGGAACAGGACTCTGGCAGCAAATCCAAATGCCAG +
Preference number: 1 (lower is better)
Translates to: TPGLHSSNMVNRRAG*FWEEQDSGSKSKCQ
Trigger: CTGGCATTTGGATTTGCTGCCAGAGTCCTGTTCCTCCCAGAACCATCCCGCCCTCCTGTTGACCATGTTACTTGAGTGTAGGCCCGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CCA 90 bp TGGTATTTGCTGACACAGGGTCCGCTGGGCTTGAGAAATGCCATGTaGTGTCACACTCCACGCAGCGGTCTTCTCTGCTTGGCTCTTTCC +
Preference number: 1 (lower is better)
Translates to: WYLLTQGPLGLRNAM*CHTPRSGLLCLALS
Trigger: GGAAAGAGCCAAGCAGAGAAGACCGCTGCGTGGAGTGTGACACCACATGGCATTTCTCAAGCCCAGCGGACCCTGTGTCAGCAAATACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CCA 90 bp CCGCCAGCCCAGGGCCACCTATGCCAGCCTGGGAGGAGGGGAGTGTaGCTGCCCCATAGCTTGAATTCCTTTATTAACAAGATATTGGTT +
Preference number: 1 (lower is better)
Translates to: PPAQGHLCQPGRRGV*LPHSLNSFINKILV
Trigger: AACCAATATCTTGTTAATAAAGGAATTCAAGCTATGGGGCAGCCACACTCCCCTCCTCCCAGGCTGGCATAGGTGGCCCTGGGCTGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR GCA 90 bp TTGAGAAATGCCATGTGGTGTCACACTCCACGCAGCGGTCTTCTCTaGTTGGCTCTTTCCTCAAAGACTCTGAGGGTCTTGACACCGGGC +
Preference number: 1 (lower is better)
Translates to: LRNAMWCHTPRSGLL*LALSSKTLRVLTPG
Trigger: GCCCGGTGTCAAGACCCTCAGAGTCTTTGAGGAAAGAGCCAAGCAGAGAAGACCGCTGCGTGGAGTGTGACACCACATGGCATTTCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CCA 90 bp GGCAGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTaGCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACAT +
Preference number: 1 (lower is better)
Translates to: GRATSSHSSPLLMTR*QFFREIRPFIYPGH
Trigger: ATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
3UTR CCA 90 bp ACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGTaGCCCCGTGAAGGCTGTTATCACACCGCAGTTCTTTACGTTATG +
Preference number: 1 (lower is better)
Translates to: TTCLGMASPAVLVPP*PREGCYHTAVLYVM
Trigger: CATAACGTAAAGAACTGCGGTGTGATAACAGCCTTCACGGGGCCACGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR CCA 90 bp GGCCTACACTCAAGTAACATGGTCAACAGGAGGGCGGGATGGTTCTaGGAGGAACAGGACTCTGGCAGCAAATCCAAATGCCAGTGGATG +
Preference number: 1 (lower is better)
Translates to: GLHSSNMVNRRAGWF*EEQDSGSKSKCQWM
Trigger: CATCCACTGGCATTTGGATTTGCTGCCAGAGTCCTGTTCCTCCCAGAACCATCCCGCCCTCCTGTTGACCATGTTACTTGAGTGTAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CCA 90 bp TTGCATGGGGGAAACTCCAGATCCTCTTTAAGACATTCCTTTGAGTaGTTCACGTCCCCTCCTGAGCAGCCCAGGGCTGGCAGTGATGGA +
Preference number: 1 (lower is better)
Translates to: LHGGNSRSSLRHSFE*FTSPPEQPRAGSDG
Trigger: TCCATCACTGCCAGCCCTGGGCTGCTCAGGAGGGGACGTGAACCACTCAAAGGAATGTCTTAAAGAGGATCTGGAGTTTCCCCCATGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR GCA 90 bp GGAAACCAGCCCAAGAGCAACGGGCATCTGTTACTGGGGCAAAGCTaGAGGCGGGGACAACAGGGTCTCATATGTCAACTTTGTATGTTC +
Preference number: 1 (lower is better)
Translates to: GNQPKSNGHLLLGQS*RRGQQGLICQLCMF
Trigger: GAACATACAAAGTTGACATATGAGACCCTGTTGTCCCCGCCTGCAGCTTTGCCCCAGTAACAGATGCCCGTTGCTCTTGGGCTGGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR TCA 90 bp AACTGCATCCACTCTGCCCTACAGCACGAAGGCCACGTTTATTACTaGACTCCTAGCCAGCCTCCAGTGCCCAAGAACGGTCAAGAAGAT +
Preference number: 1 (lower is better)
Translates to: NCIHSALQHEGHVYY*TPSQPPVPKNGQED
Trigger: ATCTTCTTGACCGTTCTTGGGCACTGGAGGCTGGCTAGGAGTTCAGTAATAAACGTGGCCTTCGTGCTGTAGGGCAGAGTGGATGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR GCA 90 bp GCGGGATGGTTCTGGGAGGAACAGGACTCTGGCAGCAAATCCAAATaGCAGTGGATGGGCGGCTCAGAAACATTTATATTTTGGGGTGAC +
Preference number: 1 (lower is better)
Translates to: AGWFWEEQDSGSKSK*QWMGGSETFIFWGD
Trigger: GTCACCCCAAAATATAAATGTTTCTGAGCCGCCCATCCACTGGCATTTGGATTTGCTGCCAGAGTCCTGTTCCTCCCAGAACCATCCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR GCA 90 bp GGCTGCTACTGTTACCAAAAGGAACTCAAGCTACAAGGGGGCAGGTaGTCCTCAGCTCCTCCACTAAAGTGCAACACTTCTCTTCTGACG +
Preference number: 1 (lower is better)
Translates to: GCYCYQKELKLQGGR*SSAPPLKCNTSLLT
Trigger: CGTCAGAAGAGAAGTGTTGCACTTTAGTGGAGGAGCTGAGGAGCACCTGCCCCCTTGTAGCTTGAGTTCCTTTTGGTAACAGTAGCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CCA 90 bp CCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTaGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCT +
Preference number: 1 (lower is better)
Translates to: PLEASSQPVELQVHS*FHSHVRGQEVRGSS
Trigger: AGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
3UTR CCA 90 bp GGCCCCGTGAAGGCTGTTATCACACCGCAGTTCTTTACGTTATGGTaGATAAAGCGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAG +
Preference number: 1 (lower is better)
Translates to: GPVKAVITPQFFTLW*IKRDANTPAFQCWE
Trigger: CTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCGCTTTATCCACCATAACGTAAAGAACTGCGGTGTGATAACAGCCTTCACGGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR CCA 90 bp CGTGGCCCCGTGAAGGCTGTTATCACACCGCAGTTCTTTACGTTATaGTGGATAAAGCGAGATGCTAACACTCCTGCCTTTCAGTGCTGG +
Preference number: 1 (lower is better)
Translates to: RGPVKAVITPQFFTL*WIKRDANTPAFQCW
Trigger: CCAGCACTGAAAGGCAGGAGTGTTAGCATCTCGCTTTATCCACCATAACGTAAAGAACTGCGGTGTGATAACAGCCTTCACGGGGCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR TCA 90 bp TTGACCACTTGCTCTAGGATGTCGGGACAATGGTCTGCTATCTGCTaGAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGT +
Preference number: 1 (lower is better)
Translates to: LTTCSRMSGQWSAIC*RMALANSCSSALSR
Trigger: ACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCCTAGAGCAAGTGGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR TCA 90 bp GCCCGCAAGTTCCTCATGGAAAACCAGACTTCAATGGACAGAAATTaGGGGGCAAGTCACAATGCCCTTCTTGACACTGAAGGCGGCCTT +
Preference number: 1 (lower is better)
Translates to: ARKFLMENQTSMDRN*GASHNALLDTEGGL
Trigger: AAGGCCGCCTTCAGTGTCAAGAAGGGCATTGTGACTTGCCCCTCAATTTCTGTCCATTGAAGTCTGGTTTTCCATGAGGAACTTGCGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR TCA 90 bp GGTGGTTATGGGGTCACAAACTGTGAAACCTCTACCCAGAGGTCCTaGACATGTATAGGAAAATCCTGGCACAACTGCGAGGCTCTGAGC +
Preference number: 1 (lower is better)
Translates to: GGYGVTNCETSTQRS*TCIGKSWHNCEALS
Trigger: GCTCAGAGCCTCGCAGTTGTGCCAGGATTTTCCTATACATGTTCAGGACCTCTGGGTAGAGGTTTCACAGTTTGTGACCCCATAACCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CCA 90 bp GAAGCTGGTGGAGTGAGTCCACGGAGGATCAGGGGGTCTCGGTCATaGCAGAGGGTTGTCAGGTGTCCAATGTACAACTTTAATTTACTT +
Preference number: 1 (lower is better)
Translates to: EAGGVSPRRIRGSRS*QRVVRCPMYNFNLL
Trigger: AAGTAAATTAAAGTTGTACATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGGACTCACTCCACCAGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR CCA 90 bp CTTGCTCTAGGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATaGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTT +
Preference number: 1 (lower is better)
Translates to: LALGCRDNGLLSAEE*RWQTPAVLHCPVHL
Trigger: AAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCCTAGAGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR TCA 90 bp GAACACTCAGCTCTCTGGTCCATTGGAGGCATCCTCTCAGCCTGTTaGACTCCAAGTCCATTCCTGGTTTCATTCTCATGTCAGAGGACA +
Preference number: 1 (lower is better)
Translates to: EHSALWSIGGILSAC*TPSPFLVSFSCQRT
Trigger: TGTCCTCTGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAGAGAGCTGAGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
3UTR TCA 90 bp CTCCAGCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTaGGAAGTGGCCTTTTCAAGGATGGATGACTTGCACACAGTAGGC +
Preference number: 1 (lower is better)
Translates to: LQQVCLTESTTSLPH*EVAFSRMDDLHTVG
Trigger: GCCTACTGTGTGCAAGTCATCCATCCTTGAAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR CCA 90 bp CTAGGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTaGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTA +
Preference number: 1 (lower is better)
Translates to: LGCRDNGLLSAEEWR*QTPAVLHCPVHLSL
Trigger: TAGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR CCA 90 bp CGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATaGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCAC +
Preference number: 1 (lower is better)
Translates to: RDANTPAFQCWELST*FTGTAMNRIEVTDH
Trigger: GTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR GCA 90 bp ACGTTATGGTGGATAAAGCGAGATGCTAACACTCCTGCCTTTCAGTaGTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACAGA +
Preference number: 1 (lower is better)
Translates to: TLWWIKRDANTPAFQ*WELSTWFTGTAMNR
Trigger: TCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCGCTTTATCCACCATAACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR CCA 90 bp GAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTaGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGT +
Preference number: 1 (lower is better)
Translates to: ESTYCDIRTLSSLVH*RHPLSLLNSKSIPG
Trigger: ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
3UTR CCA 90 bp CACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTaGAGAACACCTCACACCATCTTCTTGTTAACTGGCCGAGGAACA +
Preference number: 1 (lower is better)
Translates to: HLSMITSTVSNRRDW*RTPHTIFLLTGRGT
Trigger: TGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGGTGTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
3UTR CCA 90 bp AAGATGAGAAGCTCACACTGGGCTTCTTCAGTTACAAAACCCCGTTaGGATCACACCCACTCTTCTTCGTGCCCTCTTTATGGTGACATT +
Preference number: 1 (lower is better)
Translates to: KMRSSHWASSVTKPR*DHTHSSSCPLYGDI
Trigger: AATGTCACCATAAAGAGGGCACGAAGAAGAGTGGGTGTGATCCCAACGGGGTTTTGTAACTGAAGAAGCCCAGTGTGAGCTTCTCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR CCA 90 bp TTATGGTGGATAAAGCGAGATGCTAACACTCCTGCCTTTCAGTGCTaGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATT +
Preference number: 1 (lower is better)
Translates to: LWWIKRDANTPAFQC*ELSTWFTGTAMNRI
Trigger: AATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCGCTTTATCCACCATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR TCA 90 bp AAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTaGGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTGCCAAGAAGGT +
Preference number: 1 (lower is better)
Translates to: KMADVETVLESHFFK*ASWDEVCSVWCQEG
Trigger: ACCTTCTTGGCACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
3UTR GCA 90 bp GTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATTGATTTaGAGTCTTGGGGTCAGCTTTCTGATTTGCAACATGAAGCTGGCT +
Preference number: 1 (lower is better)
Translates to: VVYATSLTMPIPSLI*SLGVSFLICNMKLA
Trigger: AGCCAGCTTCATGTTGCAAATCAGAAAGCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR TCA 90 bp CCTTGGGTCCAGTCTGCTTTACAAGTTATTTCTAAAACCCAAGTGTaGGGAAGTCTGAGAGCCACAGGTAGATCTTTAGATTGTAAAGTG +
Preference number: 1 (lower is better)
Translates to: PWVQSALQVISKTQV*GSLRATGRSLDCKV
Trigger: CACTTTACAATCTAAAGATCTACCTGTGGCTCTCAGACTTCCTCACACTTGGGTTTTAGAAATAACTTGTAAAGCAGACTGGACCCAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR GCA 90 bp TCTGGTGGTAGAGGTGGTCAAAGAACTAGATTTGGGTTAAGTTCCTaGCTAATTATTTATGACTGCTGTTGTCTACGCTACGTCCTTAAC +
Preference number: 1 (lower is better)
Translates to: SGGRGGQRTRFGLSS*LIIYDCCCLRYVLN
Trigger: GTTAAGGACGTAGCGTAGACAACAGCAGTCATAAATAATTAGGCAGGAACTTAACCCAAATCTAGTTCTTTGACCACCTCTACCACCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR TCA 90 bp ATGGTATCAAAGTCCTTGCAAATCTCAATTGAGATACCTCATCAATaGTTCAATGAGTACCGGGGGTTAGAGGTATATGAAAAGATGAGA +
Preference number: 1 (lower is better)
Translates to: MVSKSLQISIEIPHQ*FNEYRGLEVYEKMR
Trigger: TCTCATCTTTTCATATACCTCTAACCCCCGGTACTCATTGAATCATTGATGAGGTATCTCAATTGAGATTTGCAAGGACTTTGATACCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR GCA 90 bp CAAAGAACTAGATTTGGGTTAAGTTCCTGCCTAATTATTTATGACTaGTGTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATT +
Preference number: 1 (lower is better)
Translates to: QRTRFGLSSCLIIYD*CCLRYVLNNANTFI
Trigger: AATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAACAGCAGTCATAAATAATTAGGCAGGAACTTAACCCAAATCTAGTTCTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR CAA 90 bp GCTGCAGGAGCTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTaGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGGGCATCTG +
Preference number: 2 (lower is better)
Translates to: AAGAQDTGAGKAGSL*EVFRGNQPKSNGHL
Trigger: CAGATGCCCGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR CAA 90 bp CACCTGCTTGGAGAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTaGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGTGGCC +
Preference number: 2 (lower is better)
Translates to: HLLGESSWPVPVPDH*FRHGLACCLGSTVA
Trigger: GGCCACGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTCTCCAAGCAGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp GGAGAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCTCCACCGTGGCCCCGTaGAGGCTGTTATCACACCGC +
Preference number: 2 (lower is better)
Translates to: GESSWPVPVPDHLFRHGLSTVAP*RLLSHR
Trigger: GCGGTGTGATAACAGCCTTCACGGGGCCACGGTGGA...GAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGCCTCGCCTGCTGTCTTaGTTCCACCGTGGCCCCGTG +
Preference number: 2 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPPRLLS*FHRGPV
Trigger: CACGGGGCCACGGTGGAACCAAGACAGCAGGCGAGG...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp GGAGAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCTGGCCAGTGCCCGTaGCAGACCACTTGTTTAGGC +
Preference number: 2 (lower is better)
Translates to: GESSWPVPVPDHLFRHGLAGQCP*QTTCLG
Trigger: GCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGC...GAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp CAGGCGCTGCACCTGATGAGAAAGTCCACGTGGGTGGGATCTGGGCCACCTGCTACGGGCATCTGTTACTaGGGCAAAGCTGCAGGCGGG +
Preference number: 2 (lower is better)
Translates to: QALHLMRKSTWVGSGPPATGICY*GKAAGG
Trigger: CCCGCCTGCAGCTTTGCCCCAGTAACAGATGCCCGT...AGCAGGTGGCCCAGATCCCACCCACGTGGACTTTCTCATCAGGTGCAGCGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAAGGAAGCTGGTGGAGTaGGTCCACGGAGGATCAGGG +
Preference number: 2 (lower is better)
Translates to: QRTGGERLLCSMALCQGRRKLVE*VHGGSG
Trigger: CCCTGATCCTCCGTGGACTCACTCCACCAGCTTCCT...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000588412.5
3UTR-3UTR TCA 90 bp GTTTCCTCTCACAGGGAGAGGGATTGTTTCACAGCAGGGAGTAGGGGGAGCTGGGCTCCCAAGCCATCGTaGGGCCTGCTCACAGCTCCC +
Preference number: 2 (lower is better)
Translates to: VSSHRERDCFTAGSRGSWAPKPS*GLLTAP
Trigger: GGGAGCTGTGAGCAGGCCTCACGATGGCTTGGGAGC...CCAGCTCCCCCTACTCCCTGCTGTGAAACAATCCCTCTCCCTGTGAGAGGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp GGAGAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGGGAAGTTCCTGGACTaGTGGGGCTGTGCTGACTCT +
Preference number: 2 (lower is better)
Translates to: GESSWPVPVPDHLFRHGLGKFLD*WGCADS
Trigger: AGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCC...GAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp CAGGCGCTGCACCTGATGAGAAAGTCCACGTGGGTGGGATCTGGGCCACCTGCTGTGGTGGGAAGTTCCTaGACTGATGGGGCTGTGCTG +
Preference number: 2 (lower is better)
Translates to: QALHLMRKSTWVGSGPPAVVGSS*TDGAVL
Trigger: CAGCACAGCCCCATCAGTCCAGGAACTTCCCACCAC...AGCAGGTGGCCCAGATCCCACCCACGTGGACTTTCTCATCAGGTGCAGCGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp CAGGCGCTGCACCTGATGAGAAAGTCCACGTGGGTGGGATCTGGGCCACCTGCTGGGACAGTCAAGGGCTaGTGGTGGGAAGTTCCTGGA +
Preference number: 2 (lower is better)
Translates to: QALHLMRKSTWVGSGPPAGTVKG*WWEVPG
Trigger: TCCAGGAACTTCCCACCACCAGCCCTTGACTGTCCC...AGCAGGTGGCCCAGATCCCACCCACGTGGACTTTCTCATCAGGTGCAGCGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR CAA 90 bp TGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTaGGTTCCACCGTGGCCCCGTGAAGGCTGTTATCACACCGCAGTT +
Preference number: 2 (lower is better)
Translates to: CPCQTTCLGMASPAV*VPPWPREGCYHTAV
Trigger: AACTGCGGTGTGATAACAGCCTTCACGGGGCCACGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp CCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCTTGGCTCCTGGGTTaGCTACCTCAGGCTTCCCCA +
Preference number: 2 (lower is better)
Translates to: PVPVPDHLFRHGLACCLGSWLLG*LPQASP
Trigger: TGGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGA...ACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp GCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGTTACTGGGGCAAAGCTaGAGGCGGGGACAACAGGGT +
Preference number: 2 (lower is better)
Translates to: ARQAASWRCSGETSPRATLLGQS*RRGQQG
Trigger: ACCCTGTTGTCCCCGCCTGCAGCTTTGCCCCAGTAA...CGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp GAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCGGAGATGTGAGTGTCTaGTGGGTTCTGGTGGTAGAG +
Preference number: 2 (lower is better)
Translates to: ESSWPVPVPDHLFRHGLAGDVSV*WVLVVE
Trigger: CTCTACCACCAGAACCCAGCAGACACTCACATCTCC...GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp CAGGCGCTGCACCTGATGAGAAAGTCCACGTGGGTGGGATCTGGGCCACCTGCTTTACTATCTAACCCCTaGACCCCTCTCTGGCCAGCC +
Preference number: 2 (lower is better)
Translates to: QALHLMRKSTWVGSGPPALLSNP*TPLWPA
Trigger: GGCTGGCCAGAGAGGGGTGCAGGGGTTAGATAGTAA...AGCAGGTGGCCCAGATCCCACCCACGTGGACTTTCTCATCAGGTGCAGCGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp CAGGCGCTGCACCTGATGAGAAAGTCCACGTGGGTGGGATCTGGGCCACCTGCTACAGTCAAGGGCTGGTaGTGGGAAGTTCCTGGACTG +
Preference number: 2 (lower is better)
Translates to: QALHLMRKSTWVGSGPPATVKGW*WEVPGL
Trigger: CAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGT...AGCAGGTGGCCCAGATCCCACCCACGTGGACTTTCTCATCAGGTGCAGCGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp GCGGCCTCACTCTGCAGAGGGTGCCTGCTGCATTGCAGTCTCTTCTCATCCTTCTCAGAGGACAGGAGGTaGGAGGCTCCTCTGCTCCAT +
Preference number: 2 (lower is better)
Translates to: AASLCRGCLLHCSLFSSFSEDRR*EAPLLH
Trigger: ATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGA...GAAGGATGAGAAGAGACTGCAATGCAGCAGGCACCCTCTGCAGAGTGAGGCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp GAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCGGGGAGCTGGAAATCTaGCCATGTCAGTTAATGGGA +
Preference number: 2 (lower is better)
Translates to: ESSWPVPVPDHLFRHGLAGELEI*PCQLMG
Trigger: TCCCATTAACTGACATGGTCAGATTTCCAGCTCCCC...GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp GGAGAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCGTTGGCAAACTCCTaGAGTTCTGCATTGTCCCGT +
Preference number: 2 (lower is better)
Translates to: GESSWPVPVPDHLFRHGLALANS*SSALSR
Trigger: ACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGC...GAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355446.9
ENST00000440394.7
3UTR-3UTR GCA 90 bp CAGGCGCTGCACCTGATGAGAAAGTCCACGTGGGTGGGATCTGGGCCACCTGCTAAACTGCATCCACTCTaGCCTACAGCACGAAGGCCA +
Preference number: 2 (lower is better)
Translates to: QALHLMRKSTWVGSGPPAKLHPL*PTARRP
Trigger: TGGCCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTT...AGCAGGTGGCCCAGATCCCACCCACGTGGACTTTCTCATCAGGTGCAGCGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp TCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAAAGCTCTCTGGTCCATTaGAGGCATCCTCTCAGCCTG +
Preference number: 2 (lower is better)
Translates to: SGHGCWQGRQPLGGVQGKSSLVH*RHPLSL
Trigger: CAGGCTGAGAGGATGCCTCCAATGGACCAGAGAGCT...TTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp CCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTCCTCTCTGGCCAGCCTaGCTATCAGGAAGCATCTCA +
Preference number: 2 (lower is better)
Translates to: PVPVPDHLFRHGLACCLGPLWPA*LSGSIS
Trigger: TGAGATGCTTCCTGATAGCCAGGCTGGCCAGAGAGG...ACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp CTGCCCTACAGCACGAAGGCCACGTTTATTACTGAACTCCTAGCCAGCCTCCAGCTTGGAGAGAGCAGCTaGCCAGTGCCCGTGCCAGAC +
Preference number: 2 (lower is better)
Translates to: LPYSTKATFITELLASLQLGESS*PVPVPD
Trigger: GTCTGGCACGGGCACTGGCCAGCTGCTCTCTCCAAG...CTGGAGGCTGGCTAGGAGTTCAGTAATAAACGTGGCCTTCGTGCTGTAGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp CGGGTCATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTAAGGAAGCTGGTGGAGTaGGTCCACGGAGGATCAGGG +
Preference number: 2 (lower is better)
Translates to: RVIFCSSFSQAAWSSSKLRKLVE*VHGGSG
Trigger: CCCTGATCCTCCGTGGACTCACTCCACCAGCTTCCT...TAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR-3UTR TCA 90 bp CAGGCGCTGCACCTGATGAGAAAGTCCACGTGGGTGGGATCTGGGCCACCTGCTCAACATGAAGCTGGCTaGATTCCACGAGGTACATGC +
Preference number: 2 (lower is better)
Translates to: QALHLMRKSTWVGSGPPAQHEAG*IPRGTC
Trigger: GCATGTACCTCGTGGAATTCAGCCAGCTTCATGTTG...AGCAGGTGGCCCAGATCCCACCCACGTGGACTTTCTCATCAGGTGCAGCGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCGTTATAGGAAGCTGGTaGAGTGAGTCCACGGAGGAT +
Preference number: 2 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSVIGSW*SESTED
Trigger: ATCCTCCGTGGACTCACTCCACCAGCTTCCTATAAC...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347735.10
ENST00000440394.7
3UTR-3UTR CCA 90 bp AGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGCCGTTATAGGAAGCTGGTaGAGTGAGTCCACGGAGGAT +
Preference number: 2 (lower is better)
Translates to: RTGGERLLCSMALCQGRAVIGSW*SESTED
Trigger: ATCCTCCGTGGACTCACTCCACCAGCTTCCTATAAC...GGCTCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000588412.5
3UTR-3UTR CCA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCCAAGTTATAGGAAGCTaGTGGAGTGAGTCCACGGAG +
Preference number: 2 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSQVIGS*WSESTE
Trigger: CTCCGTGGACTCACTCCACCAGCTTCCTATAACTTG...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347735.10
ENST00000440394.7
3UTR-3UTR CCA 90 bp GAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCCTGCTGATGACCAGGTaGCAGTTCTTCAGAGAGATT +
Preference number: 2 (lower is better)
Translates to: ESSWPVPVPDHLFRHGLALLMTR*QFFREI
Trigger: AATCTCTCTGAAGAACTGCCACCTGGTCATCAGCAG...GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp TCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAAGAACACTCAGCTCTCTaGTCCATTGGAGGCATCCTC +
Preference number: 2 (lower is better)
Translates to: SGHGCWQGRQPLGGVQGKEHSAL*SIGGIL
Trigger: GAGGATGCCTCCAATGGACCAGAGAGCTGAGTGTTC...TTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp CTTCCTCCTCAGTTCCGAACCCAGGCAGGTGAAGAGGAGGCCAGGAGCAGATGTGTCTTGGTTCCACCGTaGCCCCGTGAAGGCTGTTAT +
Preference number: 2 (lower is better)
Translates to: LPPQFRTQAGEEEARSRCVLVPP*PREGCY
Trigger: ATAACAGCCTTCACGGGGCCACGGTGGAACCAAGAC...ACATCTGCTCCTGGCCTCCTCTTCACCTGCCTGGGTTCGGAACTGAGGAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp CCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTGGTCTGCTATCTGCTaGAGAATGGCGTTGGCAAAC +
Preference number: 2 (lower is better)
Translates to: PVPVPDHLFRHGLACCLGWSAIC*RMALAN
Trigger: GTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCA...ACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355446.9
ENST00000440394.7
3UTR-3UTR TCA 90 bp GTCTTGGTTCCACCGTGGCCCCGTGAAGGCTGTTATCACACCGCAGTTCTTTACTCTTGGCTCCTGGGTTaGCTACCTCAGGCTTCCCCA +
Preference number: 2 (lower is better)
Translates to: VLVPPWPREGCYHTAVLYSWLLG*LPQASP
Trigger: TGGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGA...GTAAAGAACTGCGGTGTGATAACAGCCTTCACGGGGCCACGGTGGAACCAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp TGGGACAGTCAAGGGCTGGTGGTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGATCCTCTCAGCCTGTTaGACTCCAAGTCCATTCCTG +
Preference number: 2 (lower is better)
Translates to: WDSQGLVVGSSWTDGAVLILSAC*TPSPFL
Trigger: CAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGAT...CAGCACAGCCCCATCAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp CCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTGGTTTGGGGTGCAGATCTTGCTCCCAAGCCATCGTaGGGCCTGCTCACAGCTCCC +
Preference number: 2 (lower is better)
Translates to: PTLLRALFMVTLVWGADLAPKPS*GLLTAP
Trigger: GGGAGCTGTGAGCAGGCCTCACGATGGCTTGGGAGC...AAGATCTGCACCCCAAACCAATGTCACCATAAAGAGGGCACGAAGAAGAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp GTTTCCTCTCACAGGGAGAGGGATTGTTTCACAGCAGGGAGTAGGGGGAGCTGGGGCAATGCACGAGGCTaGGGTTCAGAGAAGACGAGT +
Preference number: 2 (lower is better)
Translates to: VSSHRERDCFTAGSRGSWGNARG*GSEKTS
Trigger: ACTCGTCTTCTCTGAACCTCAGCCTCGTGCATTGCC...CCAGCTCCCCCTACTCCCTGCTGTGAAACAATCCCTCTCCCTGTGAGAGGAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGACATCTCTCCCTCACTaGGAAGTGGCCTTTTCAAGG +
Preference number: 2 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPTSLPH*EVAFSR
Trigger: CCTTGAAAAGGCCACTTCTCAGTGAGGGAGAGATGT...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGCAACATGAAGCTGGCTaGATTCCACGAGGTACATGC +
Preference number: 2 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPQHEAG*IPRGTC
Trigger: GCATGTACCTCGTGGAATTCAGCCAGCTTCATGTTG...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp CCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCTTATCAGGAGATGTaGGTGTCTGCTGGGTTCTGG +
Preference number: 2 (lower is better)
Translates to: PVPVPDHLFRHGLACCLGSYQEM*VSAGFW
Trigger: CCAGAACCCAGCAGACACTCACATCTCCTGATAAGA...ACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp GTGCTGCCCTCAGGATGTGTAGCTGCAGTAGATGGATGCAATACTGGCGTGGTGAGGGTCCGCTGGGCTTaGGAAATGCCATGTGGTGTC +
Preference number: 2 (lower is better)
Translates to: VLPSGCVAAVDGCNTGVVRVRWA*EMPCGV
Trigger: GACACCACATGGCATTTCTCAAGCCCAGCGGACCCT...CACCACGCCAGTATTGCATCCATCTACTGCAGCTACACATCCTGAGGGCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp CCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTGTTTGTAGTGTTTGGTaGCAAGAAGGTTCCGGGCAC +
Preference number: 2 (lower is better)
Translates to: PVPVPDHLFRHGLACCLGVCSVW*QEGSGH
Trigger: GTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC...ACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGGTTTGTAGTGTTTGGTaGCAAGAAGGTTCCGGGCAC +
Preference number: 2 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPVCSVW*QEGSGH
Trigger: GTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGTGTTGCCCTGGCTGGTaGTCTTTCAACCTCACATGT +
Preference number: 2 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPCCPGW*SFNLTC
Trigger: ACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACA...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCGAAGTTTGTAGTGTTTaGTGCCAAGAAGGTTCCGGG +
Preference number: 2 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSEVCSV*CQEGSG
Trigger: CCCGGAACCTTCTTGGCACCAAACACTACAAACTTC...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp CCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTAACAGGAGAGACTGGTaGAGAACACCTCACACCATC +
Preference number: 2 (lower is better)
Translates to: PVPVPDHLFRHGLACCLGNRRDW*RTPHTI
Trigger: GATGGTGTGAGGTGTTCTCCACCAGTCTCTCCTGTT...ACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp GTGCTGCCCTCAGGATGTGTAGCTGCAGTAGATGGATGCAATACTGGCGTGGTGCCATCTTGGCCAGGCTaGCCTCGAACTCCTGATCTC +
Preference number: 2 (lower is better)
Translates to: VLPSGCVAAVDGCNTGVVPSWPG*PRTPDL
Trigger: GAGATCAGGAGTTCGAGGCCAGCCTGGCCAAGATGG...CACCACGCCAGTATTGCATCCATCTACTGCAGCTACACATCCTGAGGGCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp GTGGAGAACACCTCACACCATCTTCTTGTTAACTGGCCGAGGAACAGAGTGAGGAGGAAGCTGGTGGAGTaGGTCCACGGAGGATCAGGG +
Preference number: 2 (lower is better)
Translates to: VENTSHHLLVNWPRNRVRRKLVE*VHGGSG
Trigger: CCCTGATCCTCCGTGGACTCACTCCACCAGCTTCCT...CCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGGTGTTCTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000588412.5
3UTR-3UTR TCA 90 bp TGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGTCTTGGCTCCTGGGTTaGCTACCTCAGGCTTCCCCA +
Preference number: 2 (lower is better)
Translates to: WFHSHVRGQEVRGSSAPWSWLLG*LPQASP
Trigger: TGGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGA...CCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
3UTR-3UTR TCA 90 bp CCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACGGCCGAGGAACAGAGTaGGGAAGGCTGCGACAGACA +
Preference number: 2 (lower is better)
Translates to: PAFQCWELSTWFTGTAMNGRGTE*GRLRQT
Trigger: TGTCTGTCGCAGCCTTCCTCACTCTGTTCCTCGGCC...GTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp GATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGAGGGCTTCCTGGCCGAGGAACAGAGTaGGGAAGGCTGCGACAGACA +
Preference number: 2 (lower is better)
Translates to: DIGPGNASSQKQCHRGLPGRGTE*GRLRQT
Trigger: TGTCTGTCGCAGCCTTCCTCACTCTGTTCCTCGGCC...AGGAAGCCCTCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp TTCCTTGCTGTTCACAGAGACCAGACAGATGATATCGGTCCCGGAAATGCTTCTGACACACCCAGTGGCTaGGAGTGGCAGGCGCTGCAC +
Preference number: 2 (lower is better)
Translates to: FLAVHRDQTDDIGPGNASDTPSG*EWQALH
Trigger: GTGCAGCGCCTGCCACTCTCAGCCACTGGGTGTGTC...AGAAGCATTTCCGGGACCGATATCATCTGTCTGGTCTCTGTGAACAGCAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCAGGGCGTTGACCACTTaGTCTAGGATGTCGGGACAA +
Preference number: 2 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFRALTT*SRMSGQ
Trigger: TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCT...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000588412.5
3UTR-3UTR GCA 90 bp GAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGAGCTCAGGACACGGGTaGTGGCAAGGCAGGCAGCCT +
Preference number: 2 (lower is better)
Translates to: EMLTLLPFSAGSFLHGLRSSGHG*WQGRQP
Trigger: AGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCT...CCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp GTTTCCTCTCACAGGGAGAGGGATTGTTTCACAGCAGGGAGTAGGGGGAGCTGGGAAGGTTCCAGGCAATaGACGAGGCTGAGGTTCAGA +
Preference number: 2 (lower is better)
Translates to: VSSHRERDCFTAGSRGSWEGSRQ*TRLRFR
Trigger: TCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTC...CCAGCTCCCCCTACTCCCTGCTGTGAAACAATCCCTCTCCCTGTGAGAGGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp CTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTATAGGAAGCTGGTGGAGTAGGGGGTCTCGGTCATaGCAGAGGGTTGTCAGGTGT +
Preference number: 2 (lower is better)
Translates to: LILPSRLVIVQVIGSWWSRGSRS*QRVVRC
Trigger: ACACCTGACAACCCTCTGCCATGACCGAGACCCCCT...ACTCCACCAGCTTCCTATAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR-3UTR CCA 90 bp CGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAAGGGGGTCTCGGTCATaGCAGAGGGTTGTCAGGTGT +
Preference number: 2 (lower is better)
Translates to: RAPVPRSSLFLAPGLTTSRGSRS*QRVVRC
Trigger: ACACCTGACAACCCTCTGCCATGACCGAGACCCCCT...TGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR-3UTR CCA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGAAGTTTGTAGTGTTTaGTGCCAAGAAGGTTCCGGG +
Preference number: 2 (lower is better)
Translates to: QRTGGERLLCSMALCQGREVCSV*CQEGSG
Trigger: CCCGGAACCTTCTTGGCACCAAACACTACAAACTTC...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
3UTR-3UTR CCA 90 bp GCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGCTGCTGATGACCAGGTaGCAGTTCTTCAGAGAGATT +
Preference number: 2 (lower is better)
Translates to: ARQAASWRCSGETSPRATLLMTR*QFFREI
Trigger: AATCTCTCTGAAGAACTGCCACCTGGTCATCAGCAG...CGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp GTGCACGTGCATCCCAGACACCACCATGGAGGCTGCTACTGTTACCAAAAGGAAAGGCGTGAGCCACTGTaGCCGGCCCCATCCATATTT +
Preference number: 2 (lower is better)
Translates to: VHVHPRHHHGGCYCYQKERREPL*PAPSIF
Trigger: AAATATGGATGGGGCCGGCCACAGTGGCTCACGCCT...TTCCTTTTGGTAACAGTAGCAGCCTCCATGGTGGTGTCTGGGATGCACGTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CAA 90 bp TCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTaGACCACTTGCTCTAGGATGTCGGGACAATGGTCTGCTATCTGC +
Preference number: 2 (lower is better)
Translates to: SGFPIKQGQEDSSRA*TTCSRMSGQWSAIC
Trigger: GCAGATAGCAGACCATTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR CAA 90 bp GTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTaGGCTCCTGGGTTGACTACCTCAGGCTTCCCCATAAAGCAGGGT +
Preference number: 2 (lower is better)
Translates to: VPRRFRAPVPRSSLF*APGLTTSGFPIKQG
Trigger: ACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR CAA 90 bp AGCGGTCTTCTCTGCTTGGCTCTTTCCTCAAAGACTCTGAGGGTCTaGACACCGGGCCTACACTCAAGTAACATGGTCAACAGGAGGGCG +
Preference number: 2 (lower is better)
Translates to: SGLLCLALSSKTLRV*TPGLHSSNMVNRRA
Trigger: CGCCCTCCTGTTGACCATGTTACTTGAGTGTAGGCCCGGTGTCAAGACCCTCAGAGTCTTTGAGGAAAGAGCCAAGCAGAGAAGACCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp TGCGACAGACAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTTGGTCTGCTATCTGCTaGAGAATGGCGTTGGCAAAC +
Preference number: 2 (lower is better)
Translates to: CDRQAGLDEDSDLGRTSAWSAIC*RMALAN
Trigger: GTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCA...AGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTGTCTGTCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000588412.5
3UTR-3UTR TCA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCTGGTCTGCTATCTGCTaGAGAATGGCGTTGGCAAAC +
Preference number: 2 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFWSAIC*RMALAN
Trigger: GTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCA...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000588412.5
3UTR-3UTR TCA 90 bp GGAGAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCTCACACTTCTTCAAGTaGGCAAGTTGGGATGAAGTT +
Preference number: 2 (lower is better)
Translates to: GESSWPVPVPDHLFRHGLSHFFK*ASWDEV
Trigger: AACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGA...GAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp CTAACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGGCTCCCAAGCCATCGTaGGGCCTGCTCACAGCTCCC +
Preference number: 2 (lower is better)
Translates to: LTPQYDNVNSLKQERLVEAPKPS*GLLTAP
Trigger: GGGAGCTGTGAGCAGGCCTCACGATGGCTTGGGAGC...CTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
3UTR-3UTR TCA 90 bp GTCTTGGTTCCACCGTGGCCCCGTGAAGGCTGTTATCACACCGCAGTTCTTTACGCAAAGCTAGCAGGGTaGGTGAGGGATCACAACTTC +
Preference number: 2 (lower is better)
Translates to: VLVPPWPREGCYHTAVLYAKLAG*VRDHNF
Trigger: GAAGTTGTGATCCCTCACTCACCCTGCTAGCTTTGC...GTAAAGAACTGCGGTGTGATAACAGCCTTCACGGGGCCACGGTGGAACCAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp GATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGAGGGCTTCCTCCTTGGGAGAACGAGTaGTCCCAAGCCATCGTGAGG +
Preference number: 2 (lower is better)
Translates to: DIGPGNASSQKQCHRGLPPWENE*SQAIVR
Trigger: CCTCACGATGGCTTGGGAGCACTCGTTCTCCCAAGG...AGGAAGCCCTCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp GATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGAGGGCTTCCTTTACTGGGGCAAAGCTaGAGGCGGGGACAACAGGGT +
Preference number: 2 (lower is better)
Translates to: DIGPGNASSQKQCHRGLPLLGQS*RRGQQG
Trigger: ACCCTGTTGTCCCCGCCTGCAGCTTTGCCCCAGTAA...AGGAAGCCCTCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp CTTGGGGTCAGCTTTCTGATTTGCAACATGAAGCTGGCTGAATTCCACGAGGTAAGCTCAGGACACGGGTaGTGGCAAGGCAGGCAGCCT +
Preference number: 2 (lower is better)
Translates to: LGVSFLICNMKLAEFHEVSSGHG*WQGRQP
Trigger: AGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCT...TACCTCGTGGAATTCAGCCAGCTTCATGTTGCAAATCAGAAAGCTGACCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp CCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTGGTTTGGGGTGCAGATCTTGCTGGCCAGTGCCCGTaGCAGACCACTTGTTTAGGC +
Preference number: 2 (lower is better)
Translates to: PTLLRALFMVTLVWGADLAGQCP*QTTCLG
Trigger: GCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGC...AAGATCTGCACCCCAAACCAATGTCACCATAAAGAGGGCACGAAGAAGAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp CAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCAGAAGTTTGTAGTGTTTaGTGCCAAGAAGGTTCCGGG +
Preference number: 2 (lower is better)
Translates to: QAGLDEDSDLGRTSAPKPEVCSV*CQEGSG
Trigger: CCCGGAACCTTCTTGGCACCAAACACTACAAACTTC...TGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
3UTR-3UTR CCA 90 bp GAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGACGGGCATCTGTTACTaGGGCAAAGCTGCAGGCGGG +
Preference number: 2 (lower is better)
Translates to: EMLTLLPFSAGSFLHGLRTGICY*GKAAGG
Trigger: CCCGCCTGCAGCTTTGCCCCAGTAACAGATGCCCGT...CCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp GATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGAGGGCTTCCTAGGCAGGCAGCCTCTTaGAGGTGTTCAGGGGAAACC +
Preference number: 2 (lower is better)
Translates to: DIGPGNASSQKQCHRGLPRQAAS*RCSGET
Trigger: GGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCT...AGGAAGCCCTCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp GAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCCAGTTCTTTACGTTATaGTGGATAAAGCGAGATGCT +
Preference number: 2 (lower is better)
Translates to: ESSWPVPVPDHLFRHGLAQFFTL*WIKRDA
Trigger: AGCATCTCGCTTTATCCACCATAACGTAAAGAACTG...GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp GTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCTGGTCTGCTATCTGCTaGAGAATGGCGTTGGCAAAC +
Preference number: 2 (lower is better)
Translates to: VDYLRLPHKAGSRGLFQGWSAIC*RMALAN
Trigger: GTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCA...GCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR-3UTR TCA 90 bp AAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGTGGTCTGCTATCTGCTaGAGAATGGCGTTGGCAAAC +
Preference number: 2 (lower is better)
Translates to: KQGQEDSSRALTTCSRMSWSAIC*RMALAN
Trigger: GTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCA...CGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR-3UTR TCA 90 bp CGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAACTCTTCCAGGGCGTTaGCCACTTGCTCTAGGATGT +
Preference number: 2 (lower is better)
Translates to: RAPVPRSSLFLAPGLTTSTLPGR*PLALGC
Trigger: ACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGT...TGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR-3UTR TCA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACTCTTCCAGGGCGTTaGCCACTTGCTCTAGGATGT +
Preference number: 2 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTTLPGR*PLALGC
Trigger: ACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGT...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR-3UTR TCA 90 bp TGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCTCAGAGGACAGGAGGTaGGAGGCTCCTCTGCTCCAT +
Preference number: 2 (lower is better)
Translates to: WRHPLSLLNSKSIPGFILSEDRR*EAPLLH
Trigger: ATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGA...GAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
3UTR-3UTR TCA 90 bp CCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTAGACCCCCAAACTCATaGATTCCATTAGGGAACTTT +
Preference number: 2 (lower is better)
Translates to: PVPVPDHLFRHGLACCLGRPPNS*IPLGNF
Trigger: AAAGTTCCCTAATGGAATTCATGAGTTTGGGGGTCT...ACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp GATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGAGGGCTTCCTAGGCAAGCGGGTGACTaGGACCCCCAAACTCATGAA +
Preference number: 2 (lower is better)
Translates to: DIGPGNASSQKQCHRGLPRQAGD*DPQTHE
Trigger: TTCATGAGTTTGGGGGTCTCAGTCACCCGCTTGCCT...AGGAAGCCCTCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp CCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTGGTTTGGGGTGCAGATCTTCTACAGGCAAGCGGGTaGCTGAGACCCCCAAACTCA +
Preference number: 2 (lower is better)
Translates to: PTLLRALFMVTLVWGADLLQASG*LRPPNS
Trigger: TGAGTTTGGGGGTCTCAGTCACCCGCTTGCCTGTAG...AAGATCTGCACCCCAAACCAATGTCACCATAAAGAGGGCACGAAGAAGAGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp AAACCCCGTTGGGATCACACCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTGGGAAGTTCCTGGACTaGTGGGGCTGTGCTGACTCT +
Preference number: 2 (lower is better)
Translates to: KPRWDHTHSSSCPLYGDIGKFLD*WGCADS
Trigger: AGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCC...AATGTCACCATAAAGAGGGCACGAAGAAGAGTGGGTGTGATCCCAACGGGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp GCGGCCTCACTCTGCAGAGGGTGCCTGCTGCATTGCAGTCTCTTCTCATCCTTCCTCAATGAGACACTCTaGAAGCTACAAACTGCATCC +
Preference number: 2 (lower is better)
Translates to: AASLCRGCLLHCSLFSSFLNETL*KLQTAS
Trigger: GGATGCAGTTTGTAGCTTTCAGAGTGTCTCATTGAG...GAAGGATGAGAAGAGACTGCAATGCAGCAGGCACCCTCTGCAGAGTGAGGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp CTTCCTCCTCAGTTCCGAACCCAGGCAGGTGAAGAGGAGGCCAGGAGCAGATGTCTCAATGAGACACTCTaGAAGCTACAAACTGCATCC +
Preference number: 2 (lower is better)
Translates to: LPPQFRTQAGEEEARSRCLNETL*KLQTAS
Trigger: GGATGCAGTTTGTAGCTTTCAGAGTGTCTCATTGAG...ACATCTGCTCCTGGCCTCCTCTTCACCTGCCTGGGTTCGGAACTGAGGAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp GCGGCCTCACTCTGCAGAGGGTGCCTGCTGCATTGCAGTCTCTTCTCATCCTTCTCATCAATGATTCAATaGGTACCGGGGGTTAGAGGT +
Preference number: 2 (lower is better)
Translates to: AASLCRGCLLHCSLFSSFSSMIQ*VPGVRG
Trigger: ACCTCTAACCCCCGGTACTCATTGAATCATTGATGA...GAAGGATGAGAAGAGACTGCAATGCAGCAGGCACCCTCTGCAGAGTGAGGCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp CAGACAGATGATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGAAGCCATCGTGAGGCCTaGTCACAGCTCCCCGGTACA +
Preference number: 2 (lower is better)
Translates to: QTDDIGPGNASSQKQCHRSHREA*SQLPGT
Trigger: TGTACCGGGGAGCTGTGAGCAGGCCTCACGATGGCT...TCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATCATCTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp GCAGTTGTATGCCCATATGAAACCATGACCACTAGGAGAGGGGCATGGAATGACCCTTGGGAGAACGAGTaGTCCCAAGCCATCGTGAGG +
Preference number: 2 (lower is better)
Translates to: AVVCPYETMTTRRGAWNDPWENE*SQAIVR
Trigger: CCTCACGATGGCTTGGGAGCACTCGTTCTCCCAAGG...GTCATTCCATGCCCCTCTCCTAGTGGTCATGGTTTCATATGGGCATACAACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp GCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGAGTTCTAAGAGGGGCTaGATGATCGTTCTGAACAAA +
Preference number: 2 (lower is better)
Translates to: ARQAASWRCSGETSPRATSSKRG*MIVLNK
Trigger: TTTGTTCAGAACGATCATCCAGCCCCTCTTAGAACT...CGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347735.10
ENST00000440394.7
3UTR-3UTR CCA 90 bp CTAGGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTAGGGGGTCTCGGTCATaGCAGAGGGTTGTCAGGTGT +
Preference number: 2 (lower is better)
Translates to: LGCRDNGLLSAEEWRWQTRGSRS*QRVVRC
Trigger: ACACCTGACAACCCTCTGCCATGACCGAGACCCCCT...AGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR-3UTR CCA 90 bp GTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTATAGGAAGCTGGTaGAGTGAGTCCACGGAGGAT +
Preference number: 2 (lower is better)
Translates to: VDYLRLPHKAGSRGLFQGVIGSW*SESTED
Trigger: ATCCTCCGTGGACTCACTCCACCAGCTTCCTATAAC...GCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR-3UTR CCA 90 bp TTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGGCTGAAGAATGGCGTTaGCAAACTCCTGCAGTTCTG +
Preference number: 2 (lower is better)
Translates to: LTTSGFPIKQGQEDSSRAAEEWR*QTPAVL
Trigger: CAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGC...CGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR-3UTR CCA 90 bp AGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATCTATCTGCTGAAGAATaGCGTTGGCAAACTCCTGCA +
Preference number: 2 (lower is better)
Translates to: RQGWMKTQTLGERVLPSHLSAEE*RWQTPA
Trigger: TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAG...ATGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000588412.5
3UTR-3UTR CCA 90 bp GGAGAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCATTGATTTGCAGTCTTaGGGTCAGCTTTCTGATTTG +
Preference number: 2 (lower is better)
Translates to: GESSWPVPVPDHLFRHGLIDLQS*GQLSDL
Trigger: CAAATCAGAAAGCTGACCCCAAGACTGCAAATCAAT...GAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp GTGCTGCCCTCAGGATGTGTAGCTGCAGTAGATGGATGCAATACTGGCGTGGTGAAAGAAGAGAGGAGGTaGGATGGGACAAAAACCCGC +
Preference number: 2 (lower is better)
Translates to: VLPSGCVAAVDGCNTGVVKEERR*DGTKTR
Trigger: GCGGGTTTTTGTCCCATCCCACCTCCTCTCTTCTTT...CACCACGCCAGTATTGCATCCATCTACTGCAGCTACACATCCTGAGGGCAGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CAA 90 bp ACTCCTAGCCAGCCTCCAGTGCCCAAGAACGGTCAAGAAGATTCCTaGCTGTTCACAGAGACCAGACAGATGATATCGGTCCCGGAAATG +
Preference number: 2 (lower is better)
Translates to: TPSQPPVPKNGQEDS*LFTETRQMISVPEM
Trigger: CATTTCCGGGACCGATATCATCTGTCTGGTCTCTGTGAACAGCAAGGAATCTTCTTGACCGTTCTTGGGCACTGGAGGCTGGCTAGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp TGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCTTCTCTAACTCATCCTaGAGCTGCCCCCGGGTCATC +
Preference number: 2 (lower is better)
Translates to: WRHPLSLLNSKSIPGFILFSNSS*SCPRVI
Trigger: GATGACCCGGGGGCAGCTTCAGGATGAGTTAGAGAA...GAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000588412.5
3UTR-3UTR TCA 90 bp GTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGACTCTACAGACTTTAAATTCTTCTTGGCTCCTGGGTTaGCTACCTCAGGCTTCCCCA +
Preference number: 2 (lower is better)
Translates to: VGSSWTDGAVLTLQTLNSSWLLG*LPQASP
Trigger: TGGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGA...AGAATTTAAAGTCTGTAGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTCTTGGCTCCTGGGTTaGCTACCTCAGGCTTCCCCA +
Preference number: 2 (lower is better)
Translates to: AERQSKMADVETVLESHFSWLLG*LPQASP
Trigger: TGGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGA...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
3UTR-3UTR TCA 90 bp CAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATCACACTTCTTCAAGTaGGCAAGTTGGGATGAAGTT +
Preference number: 2 (lower is better)
Translates to: QAGLDEDSDLGRTSAPKPSHFFK*ASWDEV
Trigger: AACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGA...TGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
3UTR-3UTR TCA 90 bp CTTGGGGTCAGCTTTCTGATTTGCAACATGAAGCTGGCTGAATTCCACGAGGTATCAGAGGACAGGAGGTaGGAGGCTCCTCTGCTCCAT +
Preference number: 2 (lower is better)
Translates to: LGVSFLICNMKLAEFHEVSEDRR*EAPLLH
Trigger: ATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGA...TACCTCGTGGAATTCAGCCAGCTTCATGTTGCAAATCAGAAAGCTGACCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp CAGACAGATGATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGATCAGAGGACAGGAGGTaGGAGGCTCCTCTGCTCCAT +
Preference number: 2 (lower is better)
Translates to: QTDDIGPGNASSQKQCHRSEDRR*EAPLLH
Trigger: ATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGA...TCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATCATCTGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp GTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGACTCTACAGACTTTAAATTCTTCAGAGGACAGGAGGTaGGAGGCTCCTCTGCTCCAT +
Preference number: 2 (lower is better)
Translates to: VGSSWTDGAVLTLQTLNSSEDRR*EAPLLH
Trigger: ATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGA...AGAATTTAAAGTCTGTAGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp AGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTGGCCGAGGAACAGAGTaGGGAAGGCTGCGACAGACA +
Preference number: 2 (lower is better)
Translates to: RYVSQNPLHLSLTEKWPFGRGTE*GRLRQT
Trigger: TGTCTGTCGCAGCCTTCCTCACTCTGTTCCTCGGCC...AAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCAGGGCGTTGACCACTTaGTCTAGGATGTCGGGACAA +
Preference number: 2 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFRALTT*SRMSGQ
Trigger: TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCT...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR-3UTR GCA 90 bp GTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGACTCTACAGACTTTAAATTCTTTACTGGGGCAAAGCTaGAGGCGGGGACAACAGGGT +
Preference number: 2 (lower is better)
Translates to: VGSSWTDGAVLTLQTLNSLLGQS*RRGQQG
Trigger: ACCCTGTTGTCCCCGCCTGCAGCTTTGCCCCAGTAA...AGAATTTAAAGTCTGTAGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp GTACATGCAGATGTCAGGAAATGGCCACCCACAAGTAGATACTCAGAGCCCCTCGAAGGTTCCAGGCAATaGACGAGGCTGAGGTTCAGA +
Preference number: 2 (lower is better)
Translates to: VHADVRKWPPTSRYSEPLEGSRQ*TRLRFR
Trigger: TCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTC...GAGGGGCTCTGAGTATCTACTTGTGGGTGGCCATTTCCTGACATCTGCATGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp GCGGCCTCACTCTGCAGAGGGTGCCTGCTGCATTGCAGTCTCTTCTCATCCTTCGGACATGCTATTTACTaGTTCAACTCCAGCAGGTAT +
Preference number: 2 (lower is better)
Translates to: AASLCRGCLLHCSLFSSFGHAIY*FNSSRY
Trigger: ATACCTGCTGGAGTTGAAGCAGTAAATAGCATGTCC...GAAGGATGAGAAGAGACTGCAATGCAGCAGGCACCCTCTGCAGAGTGAGGCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGATACCTTCATTGATTTaGAGTCTTGGGGTCAGCTTT +
Preference number: 2 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPIPSLI*SLGVSF
Trigger: AAAGCTGACCCCAAGACTGCAAATCAATGAAGGTAT...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCACAAGTTATAGGAAGCTaGTGGAGTGAGTCCACGGAG +
Preference number: 2 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPQVIGS*WSESTE
Trigger: CTCCGTGGACTCACTCCACCAGCTTCCTATAACTTG...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000588412.5
3UTR-3UTR CCA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTGCTGAAGAATGGCGTTaGCAAACTCCTGCAGTTCTG +
Preference number: 2 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTAEEWR*QTPAVL
Trigger: CAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGC...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR-3UTR CCA 90 bp ATGAGACACTCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGAGCTCTCTGGTCCATTaGAGGCATCCTCTCAGCCTG +
Preference number: 2 (lower is better)
Translates to: MRHSESYKLHPLCPTARRSSLVH*RHPLSL
Trigger: CAGGCTGAGAGGATGCCTCCAATGGACCAGAGAGCT...CCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGAGTGTCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp AGGGTCACGCTATGTTGCCCTGGCTGGTGCTCTTTCAACCTCACATGTTCTTCAGAACACTCAGCTCTCTaGTCCATTGGAGGCATCCTC +
Preference number: 2 (lower is better)
Translates to: RVTLCCPGWCSFNLTCSSEHSAL*SIGGIL
Trigger: GAGGATGCCTCCAATGGACCAGAGAGCTGAGTGTTC...TGAAGAACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACATAGCGTGACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
3UTR-3UTR CCA 90 bp ATTTATGCTAGAAGAAGGTTCCAGGCAATGCACGAGGCTGAGGTTCAGAGAAGAACGGGCATCTGTTACTaGGGCAAAGCTGCAGGCGGG +
Preference number: 2 (lower is better)
Translates to: IYARRRFQAMHEAEVQRRTGICY*GKAAGG
Trigger: CCCGCCTGCAGCTTTGCCCCAGTAACAGATGCCCGT...TCTTCTCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTCTTCTAGCATAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp TTCCTTGCTGTTCACAGAGACCAGACAGATGATATCGGTCCCGGAAATGCTTCTAACTTCAGCAGCCACTaGGCTGCAGGAGCTCAGGAC +
Preference number: 2 (lower is better)
Translates to: FLAVHRDQTDDIGPGNASNFSSH*AAGAQD
Trigger: GTCCTGAGCTCCTGCAGCCCAGTGGCTGCTGAAGTT...AGAAGCATTTCCGGGACCGATATCATCTGTCTGGTCTCTGTGAACAGCAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp GTCTTGGTTCCACCGTGGCCCCGTGAAGGCTGTTATCACACCGCAGTTCTTTACGCAGATGTCAGGAAATaGCCACCCACAAGTAGATAC +
Preference number: 2 (lower is better)
Translates to: VLVPPWPREGCYHTAVLYADVRK*PPTSRY
Trigger: GTATCTACTTGTGGGTGGCCATTTCCTGACATCTGC...GTAAAGAACTGCGGTGTGATAACAGCCTTCACGGGGCCACGGTGGAACCAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp GTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGACTCTACAGACTTTAAATTCTGGGACAGTCAAGGGCTaGTGGTGGGAAGTTCCTGGA +
Preference number: 2 (lower is better)
Translates to: VGSSWTDGAVLTLQTLNSGTVKG*WWEVPG
Trigger: TCCAGGAACTTCCCACCACCAGCCCTTGACTGTCCC...AGAATTTAAAGTCTGTAGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp ATGAGACACTCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGCCTCTCTGGCCAGCCTaGCTATCAGGAAGCATCTCA +
Preference number: 2 (lower is better)
Translates to: MRHSESYKLHPLCPTARRPLWPA*LSGSIS
Trigger: TGAGATGCTTCCTGATAGCCAGGCTGGCCAGAGAGG...CCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGAGTGTCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp TCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGCCACGTTTACCTCTCTGGCCAGCCTaGCTATCAGGAAGCATCTCA +
Preference number: 2 (lower is better)
Translates to: SESYKLHPLCPTARRPRLPLWPA*LSGSIS
Trigger: TGAGATGCTTCCTGATAGCCAGGCTGGCCAGAGAGG...TAAACGTGGCCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp TCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGCCACGTTTAGTCTTGGTTCCACCGTaGCCCCGTGAAGGCTGTTAT +
Preference number: 2 (lower is better)
Translates to: SESYKLHPLCPTARRPRLVLVPP*PREGCY
Trigger: ATAACAGCCTTCACGGGGCCACGGTGGAACCAAGAC...TAAACGTGGCCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp GCGGCCTCACTCTGCAGAGGGTGCCTGCTGCATTGCAGTCTCTTCTCATCCTTCTGGGAGTGGGACATTTaGTTAAGTGTTGGTTCAATG +
Preference number: 2 (lower is better)
Translates to: AASLCRGCLLHCSLFSSFWEWDI*LSVGSM
Trigger: CATTGAACCAACACTTAACCAAATGTCCCACTCCCA...GAAGGATGAGAAGAGACTGCAATGCAGCAGGCACCCTCTGCAGAGTGAGGCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp GTGCTGCCCTCAGGATGTGTAGCTGCAGTAGATGGATGCAATACTGGCGTGGTGTACACTCAAGTAACATaGTCAACAGGAGGGCGGGAT +
Preference number: 2 (lower is better)
Translates to: VLPSGCVAAVDGCNTGVVYTQVT*STGGRD
Trigger: ATCCCGCCCTCCTGTTGACCATGTTACTTGAGTGTA...CACCACGCCAGTATTGCATCCATCTACTGCAGCTACACATCCTGAGGGCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CAA 90 bp CAGATGTTAAATTACTGGTATTTGCTGACACAGGGTCCGCTGGGCTaGAGAAATGCCATGTGGTGTCACACTCCACGCAGCGGTCTTCTC +
Preference number: 2 (lower is better)
Translates to: QMLNYWYLLTQGPLG*RNAMWCHTPRSGLL
Trigger: GAGAAGACCGCTGCGTGGAGTGTGACACCACATGGCATTTCTCAAGCCCAGCGGACCCTGTGTCAGCAAATACCAGTAATTTAACATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp GTACATGCAGATGTCAGGAAATGGCCACCCACAAGTAGATACTCAGAGCCCCTCATCCTCTCAGCCTGTTaGACTCCAAGTCCATTCCTG +
Preference number: 2 (lower is better)
Translates to: VHADVRKWPPTSRYSEPLILSAC*TPSPFL
Trigger: CAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGAT...GAGGGGCTCTGAGTATCTACTTGTGGGTGGCCATTTCCTGACATCTGCATGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp TCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGCCACGTTTAGCAAAGCTAGCAGGGTaGGTGAGGGATCACAACTTC +
Preference number: 2 (lower is better)
Translates to: SESYKLHPLCPTARRPRLAKLAG*VRDHNF
Trigger: GAAGTTGTGATCCCTCACTCACCCTGCTAGCTTTGC...TAAACGTGGCCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp CCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACGGGGAGCTGGAAATCTaGCCATGTCAGTTAATGGGA +
Preference number: 2 (lower is better)
Translates to: PAFQCWELSTWFTGTAMNGELEI*PCQLMG
Trigger: TCCCATTAACTGACATGGTCAGATTTCCAGCTCCCC...GTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp GTGCTGCCCTCAGGATGTGTAGCTGCAGTAGATGGATGCAATACTGGCGTGGTGCTCAATGAGACACTCTaGAAGCTACAAACTGCATCC +
Preference number: 2 (lower is better)
Translates to: VLPSGCVAAVDGCNTGVVLNETL*KLQTAS
Trigger: GGATGCAGTTTGTAGCTTTCAGAGTGTCTCATTGAG...CACCACGCCAGTATTGCATCCATCTACTGCAGCTACACATCCTGAGGGCAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp CCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTGGTTTGGGGTGCAGATCTTGTGCCCTCTTTATGGTaGCATTGGTTTGGGGTGCAG +
Preference number: 2 (lower is better)
Translates to: PTLLRALFMVTLVWGADLVPSLW*HWFGVQ
Trigger: CTGCACCCCAAACCAATGTCACCATAAAGAGGGCAC...AAGATCTGCACCCCAAACCAATGTCACCATAAAGAGGGCACGAAGAAGAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp CCATGCAGTATTAGGCACACTGAGCTAGAACCCACGTCGGGTGAGGGTGGTTATTTTAAGACATTCCTTTaGGTGGTTCACGTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: PCSIRHTELEPTSGEGGYFKTFL*VVHVPS
Trigger: GGAGGGGACGTGAACCACTCAAAGGAATGTCTTAAA...ATAACCACCCTCACCCGACGTGGGTTCTAGCTCAGTGTGCCTAATACTGCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp AAACCCCGTTGGGATCACACCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTAGGGCGTTGACCACTTaGTCTAGGATGTCGGGACAA +
Preference number: 2 (lower is better)
Translates to: KPRWDHTHSSSCPLYGDIRALTT*SRMSGQ
Trigger: TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCT...AATGTCACCATAAAGAGGGCACGAAGAAGAGTGGGTGTGATCCCAACGGGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440394.7
3UTR-3UTR GCA 90 bp TCCAGCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGGAAGGTTCCAGGCAATaGACGAGGCTGAGGTTCAGA +
Preference number: 2 (lower is better)
Translates to: SSRYVSQNPLHLSLTEKWEGSRQ*TRLRFR
Trigger: TCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTC...CCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGCTAATTATTTATGACTaGTGTTGTCTACGCTACGTC +
Preference number: 2 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPLIIYD*CCLRYV
Trigger: GACGTAGCGTAGACAACAGCAGTCATAAATAATTAG...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp TTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACATCCAGGGGGTCTCGGTCATaGCAGAGGGTTGTCAGGTGT +
Preference number: 2 (lower is better)
Translates to: FDPLSTLDIKKVSVETTSRGSRS*QRVVRC
Trigger: ACACCTGACAACCCTCTGCCATGACCGAGACCCCCT...GGATGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000588412.5
3UTR-3UTR CCA 90 bp GGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTCAAGTTATAGGAAGCTaGTGGAGTGAGTCCACGGAG +
Preference number: 2 (lower is better)
Translates to: GCRDNGLLSAEEWRWQTPQVIGS*WSESTE
Trigger: CTCCGTGGACTCACTCCACCAGCTTCCTATAACTTG...AGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR-3UTR CCA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTCTATCTGCTGAAGAATaGCGTTGGCAAACTCCTGCA +
Preference number: 2 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTLSAEE*RWQTPA
Trigger: TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAG...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR-3UTR CCA 90 bp TGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGTCTTTTCTTGGCTCCTaGGTTGACTACCTCAGGCTT +
Preference number: 2 (lower is better)
Translates to: WFHSHVRGQEVRGSSAPWSFLGS*VDYLRL
Trigger: AAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGA...CCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
3UTR-3UTR CCA 90 bp TCTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGGAAGTTTGTAGTGTTTaGTGCCAAGAAGGTTCCGGG +
Preference number: 2 (lower is better)
Translates to: SGPLEASSQPVELQVHSWEVCSV*CQEGSG
Trigger: CCCGGAACCTTCTTGGCACCAAACACTACAAACTTC...CCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
3UTR-3UTR CCA 90 bp ACACACCTTAAGATCGGGGAGGGGAAGGACATGCTATTTACTGCTTCAACTCCAAGCTCTCTGGTCCATTaGAGGCATCCTCTCAGCCTG +
Preference number: 2 (lower is better)
Translates to: THLKIGEGKDMLFTASTPSSLVH*RHPLSL
Trigger: CAGGCTGAGAGGATGCCTCCAATGGACCAGAGAGCT...TGGAGTTGAAGCAGTAAATAGCATGTCCTTCCCCTCCCCGATCTTAAGGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp GTGCACGTGCATCCCAGACACCACCATGGAGGCTGCTACTGTTACCAAAAGGAACATCTTCTTGTTAACTaGCCGAGGAACAGAGTGAGG +
Preference number: 2 (lower is better)
Translates to: VHVHPRHHHGGCYCYQKEHLLVN*PRNRVR
Trigger: CCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATG...TTCCTTTTGGTAACAGTAGCAGCCTCCATGGTGGTGTCTGGGATGCACGTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp CCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACTCAAACAGGAGAGACTaGTGGAGAACACCTCACACC +
Preference number: 2 (lower is better)
Translates to: PAFQCWELSTWFTGTAMNSNRRD*WRTPHT
Trigger: GGTGTGAGGTGTTCTCCACCAGTCTCTCCTGTTTGA...GTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR CAA 90 bp AGAACACTCAGCTCTCTGGTCCATTGGAGGCATCCTCTCAGCCTGTaGAACTCCAAGTCCATTCCTGGTTTCATTCTCATGTCAGAGGAC +
Preference number: 2 (lower is better)
Translates to: RTLSSLVHWRHPLSL*NSKSIPGFILMSED
Trigger: GTCCTCTGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAGAGAGCTGAGTGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
3UTR-3UTR TCA 90 bp TCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGCCACGTTTAACATCTCTCCCTCACTaGGAAGTGGCCTTTTCAAGG +
Preference number: 2 (lower is better)
Translates to: SESYKLHPLCPTARRPRLTSLPH*EVAFSR
Trigger: CCTTGAAAAGGCCACTTCTCAGTGAGGGAGAGATGT...TAAACGTGGCCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp AGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTAGGCAAGCGGGTGACTaGGACCCCCAAACTCATGAA +
Preference number: 2 (lower is better)
Translates to: RYVSQNPLHLSLTEKWPFRQAGD*DPQTHE
Trigger: TTCATGAGTTTGGGGGTCTCAGTCACCCGCTTGCCT...AAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp GTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGACTCTACAGACTTTAAATTCTGCGTTGGCAAACTCCTaGAGTTCTGCATTGTCCCGT +
Preference number: 2 (lower is better)
Translates to: VGSSWTDGAVLTLQTLNSALANS*SSALSR
Trigger: ACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGC...AGAATTTAAAGTCTGTAGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355446.9
ENST00000440394.7
3UTR-3UTR GCA 90 bp TCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCTTTCTGAGCCATCGTGAGGCCTaGTCACAGCTCCCCGGTACA +
Preference number: 2 (lower is better)
Translates to: SLTMPIPSLICSLGVSFLSHREA*SQLPGT
Trigger: TGTACCGGGGAGCTGTGAGCAGGCCTCACGATGGCT...CAGAAAGCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp CTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCAAGTTATAGGAAGCTaGTGGAGTGAGTCCACGGAG +
Preference number: 2 (lower is better)
Translates to: LSAEEWRWQTPAVLHCPVQVIGS*WSESTE
Trigger: CTCCGTGGACTCACTCCACCAGCTTCCTATAACTTG...AACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR-3UTR CCA 90 bp AGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTCAAGTTATAGGAAGCTaGTGGAGTGAGTCCACGGAG +
Preference number: 2 (lower is better)
Translates to: RMALANSCSSALSRSPFSQVIGS*WSESTE
Trigger: CTCCGTGGACTCACTCCACCAGCTTCCTATAACTTG...AGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR-3UTR CCA 90 bp AGGGTCACGCTATGTTGCCCTGGCTGGTGCTCTTTCAACCTCACATGTTCTTCACTGCTGATGACCAGGTaGCAGTTCTTCAGAGAGATT +
Preference number: 2 (lower is better)
Translates to: RVTLCCPGWCSFNLTCSSLLMTR*QFFREI
Trigger: AATCTCTCTGAAGAACTGCCACCTGGTCATCAGCAG...TGAAGAACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACATAGCGTGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
3UTR-3UTR CCA 90 bp CCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACACCGAACACTCAGCTCTCTaGTCCATTGGAGGCATCCTC +
Preference number: 2 (lower is better)
Translates to: PQYDNVNSLKQERLVENTEHSAL*SIGGIL
Trigger: GAGGATGCCTCCAATGGACCAGAGAGCTGAGTGTTC...GGTGTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
3UTR-3UTR CCA 90 bp TCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGCCACGTTTAAACAGGAGAGACTGGTaGAGAACACCTCACACCATC +
Preference number: 2 (lower is better)
Translates to: SESYKLHPLCPTARRPRLNRRDW*RTPHTI
Trigger: GATGGTGTGAGGTGTTCTCCACCAGTCTCTCCTGTT...TAAACGTGGCCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp CCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTGGTTTGGGGTGCAGATCTTAACAGGAGAGACTGGTaGAGAACACCTCACACCATC +
Preference number: 2 (lower is better)
Translates to: PTLLRALFMVTLVWGADLNRRDW*RTPHTI
Trigger: GATGGTGTGAGGTGTTCTCCACCAGTCTCTCCTGTT...AAGATCTGCACCCCAAACCAATGTCACCATAAAGAGGGCACGAAGAAGAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp TTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTAGGCAGGCAGCCTCTTaGAGGTGTTCAGGGGAAACC +
Preference number: 2 (lower is better)
Translates to: FQCWELSTWFTGTAMNRIRQAAS*RCSGET
Trigger: GGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCT...AATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp CCTAGTGTGATGGGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACAACTTCAGCAGCCACTaGGCTGCAGGAGCTCAGGAC +
Preference number: 2 (lower is better)
Translates to: PSVMGVGHLVKCWFNDLDNFSSH*AAGAQD
Trigger: GTCCTGAGCTCCTGCAGCCCAGTGGCTGCTGAAGTT...GTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCCCATCACACTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp CCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACGCAGATGTCAGGAAATaGCCACCCACAAGTAGATAC +
Preference number: 2 (lower is better)
Translates to: PAFQCWELSTWFTGTAMNADVRK*PPTSRY
Trigger: GTATCTACTTGTGGGTGGCCATTTCCTGACATCTGC...GTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp GGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACTCTTGGCTCCTGGGTTaGCTACCTCAGGCTTCCCCA +
Preference number: 2 (lower is better)
Translates to: GVGHLVKCWFNDLDSMRHSWLLG*LPQASP
Trigger: TGGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGA...GTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp ACACACCTTAAGATCGGGGAGGGGAAGGACATGCTATTTACTGCTTCAACTCCAATCCTCTCAGCCTGTTaGACTCCAAGTCCATTCCTG +
Preference number: 2 (lower is better)
Translates to: THLKIGEGKDMLFTASTPILSAC*TPSPFL
Trigger: CAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGAT...TGGAGTTGAAGCAGTAAATAGCATGTCCTTCCCCTCCCCGATCTTAAGGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp TTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTAGGCAAGCGGGTGACTaGGACCCCCAAACTCATGAA +
Preference number: 2 (lower is better)
Translates to: FQCWELSTWFTGTAMNRIRQAGD*DPQTHE
Trigger: TTCATGAGTTTGGGGGTCTCAGTCACCCGCTTGCCT...AATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp CTGCCCTACAGCACGAAGGCCACGTTTATTACTGAACTCCTAGCCAGCCTCCAGCTGCCTAATTATTTATaGCTGCTGTTGTCTACGCTA +
Preference number: 2 (lower is better)
Translates to: LPYSTKATFITELLASLQLPNYL*LLLSTL
Trigger: TAGCGTAGACAACAGCAGTCATAAATAATTAGGCAG...CTGGAGGCTGGCTAGGAGTTCAGTAATAAACGTGGCCTTCGTGCTGTAGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp ATAAAGCGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTCTTATCAGGAGATGTaGGTGTCTGCTGGGTTCTGG +
Preference number: 2 (lower is better)
Translates to: IKRDANTPAFQCWELSTWSYQEM*VSAGFW
Trigger: CCAGAACCCAGCAGACACTCACATCTCCTGATAAGA...CCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCGCTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp TCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACAAAGGGAAGTTCCTGGACTaGTGGGGCTGTGCTGACTCT +
Preference number: 2 (lower is better)
Translates to: STWFTGTAMNRIEVTDHKGKFLD*WGCADS
Trigger: AGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCC...TTTGTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACGCGTTGGCAAACTCCTaGAGTTCTGCATTGTCCCGT +
Preference number: 2 (lower is better)
Translates to: TPQYDNVNSLKQERLVENALANS*SSALSR
Trigger: ACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGC...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000588412.5
3UTR-3UTR GCA 90 bp CCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACACCGTTTGTAGTGTTTGGTaGCAAGAAGGTTCCGGGCAC +
Preference number: 2 (lower is better)
Translates to: PQYDNVNSLKQERLVENTVCSVW*QEGSGH
Trigger: GTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC...GGTGTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
3UTR-3UTR GCA 90 bp CCATGCAGTATTAGGCACACTGAGCTAGAACCCACGTCGGGTGAGGGTGGTTATGGACATGCTATTTACTaGTTCAACTCCAGCAGGTAT +
Preference number: 2 (lower is better)
Translates to: PCSIRHTELEPTSGEGGYGHAIY*FNSSRY
Trigger: ATACCTGCTGGAGTTGAAGCAGTAAATAGCATGTCC...ATAACCACCCTCACCCGACGTGGGTTCTAGCTCAGTGTGCCTAATACTGCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp TCCAGCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGATTCCACGAGGTACATaGAGATGTCAGGAAATGGCC +
Preference number: 2 (lower is better)
Translates to: SSRYVSQNPLHLSLTEKWIPRGT*RCQEMA
Trigger: GGCCATTTCCTGACATCTGCATGTACCTCGTGGAAT...CCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp TTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACTCTGAAAGCTACGGGATCTGGGCCACCTaGTTGGAGAGAGCAGCTGGC +
Preference number: 2 (lower is better)
Translates to: LVKCWFNDLDSMRHSESYGIWAT*LERAAG
Trigger: GCCAGCTGCTCTCTCCAAGCAGGTGGCCCAGATCCC...GTAGCTTTCAGAGTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp ATGAGACACTCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGCTGAAAGCTACAAACTaGATCCACTCTGCCCTACAG +
Preference number: 2 (lower is better)
Translates to: MRHSESYKLHPLCPTARRLKATN*IHSALQ
Trigger: CTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAG...CCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGAGTGTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp TTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGTTCTAAGAGGGGCTaGATGATCGTTCTGAACAAA +
Preference number: 2 (lower is better)
Translates to: FPIKQGQEDSSRALTTCSSSKRG*MIVLNK
Trigger: TTTGTTCAGAACGATCATCCAGCCCCTCTTAGAACT...AGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR-3UTR CCA 90 bp TGCTATTTACTGCTTCAACTCCAGCAGGTATGTCTCACAGAATCCACTACATCTAGGGGGTCTCGGTCATaGCAGAGGGTTGTCAGGTGT +
Preference number: 2 (lower is better)
Translates to: CYLLLQLQQVCLTESTTSRGSRS*QRVVRC
Trigger: ACACCTGACAACCCTCTGCCATGACCGAGACCCCCT...AGATGTAGTGGATTCTGTGAGACATACCTGCTGGAGTTGAAGCAGTAAATAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347735.10
ENST00000440394.7
3UTR-3UTR CCA 90 bp CCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTGGTTTGGGGTGCAGATCTTTCTTTTCTTGGCTCCTaGGTTGACTACCTCAGGCTT +
Preference number: 2 (lower is better)
Translates to: PTLLRALFMVTLVWGADLSFLGS*VDYLRL
Trigger: AAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGA...AAGATCTGCACCCCAAACCAATGTCACCATAAAGAGGGCACGAAGAAGAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp TATGCTAGAAGAAGGTTCCAGGCAATGCACGAGGCTGAGGTTCAGAGAAGACGATCTTTTCTTGGCTCCTaGGTTGACTACCTCAGGCTT +
Preference number: 2 (lower is better)
Translates to: YARRRFQAMHEAEVQRRRSFLGS*VDYLRL
Trigger: AAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGA...TCGTCTTCTCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTCTTCTAGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCAACCCTTTATCTACCCTaGACATCAAGAAGGTTAGTG +
Preference number: 2 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPTLYLP*TSRRLV
Trigger: CACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGT...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
3UTR-3UTR CCA 90 bp GCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTCTGCTGATGACCAGGTaGCAGTTCTTCAGAGAGATT +
Preference number: 2 (lower is better)
Translates to: AGMSHRIHYISPSLRSGLLLMTR*QFFREI
Trigger: AATCTCTCTGAAGAACTGCCACCTGGTCATCAGCAG...AAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp CCTAGTGTGATGGGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACAGCTCTCTGGTCCATTaGAGGCATCCTCTCAGCCTG +
Preference number: 2 (lower is better)
Translates to: PSVMGVGHLVKCWFNDLDSSLVH*RHPLSL
Trigger: CAGGCTGAGAGGATGCCTCCAATGGACCAGAGAGCT...GTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCCCATCACACTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp AGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTGAACACTCAGCTCTCTaGTCCATTGGAGGCATCCTC +
Preference number: 2 (lower is better)
Translates to: RYVSQNPLHLSLTEKWPFEHSAL*SIGGIL
Trigger: GAGGATGCCTCCAATGGACCAGAGAGCTGAGTGTTC...AAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp CTTGGGGTCAGCTTTCTGATTTGCAACATGAAGCTGGCTGAATTCCACGAGGTAAACAGGAGAGACTGGTaGAGAACACCTCACACCATC +
Preference number: 2 (lower is better)
Translates to: LGVSFLICNMKLAEFHEVNRRDW*RTPHTI
Trigger: GATGGTGTGAGGTGTTCTCCACCAGTCTCTCCTGTT...TACCTCGTGGAATTCAGCCAGCTTCATGTTGCAAATCAGAAAGCTGACCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp ATGACTGCTGTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATTGATTACGGGCATCTGTTACTaGGGCAAAGCTGCAGGCGGG +
Preference number: 2 (lower is better)
Translates to: MTAVVYATSLTMPIPSLITGICY*GKAAGG
Trigger: CCCGCCTGCAGCTTTGCCCCAGTAACAGATGCCCGT...AATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAACAGCAGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp GGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACAGGCAGGCAGCCTCTTaGAGGTGTTCAGGGGAAACC +
Preference number: 2 (lower is better)
Translates to: GVGHLVKCWFNDLDSMRHRQAAS*RCSGET
Trigger: GGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCT...GTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp TCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCTTTCTGAGGCAGGCAGCCTCTTaGAGGTGTTCAGGGGAAACC +
Preference number: 2 (lower is better)
Translates to: SLTMPIPSLICSLGVSFLRQAAS*RCSGET
Trigger: GGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCT...CAGAAAGCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp TCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGCCACGTTTATGGGAGCTTTCTACATaGTTTACGGGCACTGCAATG +
Preference number: 2 (lower is better)
Translates to: SESYKLHPLCPTARRPRLWELST*FTGTAM
Trigger: CATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCA...TAAACGTGGCCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp ATGAGACACTCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGTGGGAGCTTTCTACATaGTTTACGGGCACTGCAATG +
Preference number: 2 (lower is better)
Translates to: MRHSESYKLHPLCPTARRWELST*FTGTAM
Trigger: CATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCA...CCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGAGTGTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp ATGAGACACTCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGCCTGCCTTTCAGTGCTaGGAGCTTTCTACATGGTTT +
Preference number: 2 (lower is better)
Translates to: MRHSESYKLHPLCPTARRPAFQC*ELSTWF
Trigger: AAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG...CCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGAGTGTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR CAA 90 bp AGACTTCAATGGACAGAAATTGAGGGGCAAGTCACAATGCCCTTCTaGACACTGAAGGCGGCCTTGGGTCCAGTCTGCTTTACAAGTTAT +
Preference number: 2 (lower is better)
Translates to: RLQWTEIEGQVTMPF*TLKAALGPVCFTSY
Trigger: ATAACTTGTAAAGCAGACTGGACCCAAGGCCGCCTTCAGTGTCAAGAAGGGCATTGTGACTTGCCCCTCAATTTCTGTCCATTGAAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp AGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTTGGTCTGCTATCTGCTaGAGAATGGCGTTGGCAAAC +
Preference number: 2 (lower is better)
Translates to: RYVSQNPLHLSLTEKWPFWSAIC*RMALAN
Trigger: GTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCA...AAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
3UTR-3UTR TCA 90 bp AGGAAGCATCTCAGTAAGAGGTTTATGAGCAGAGTCCATTTAACCTTCGATAAGTCTTGGCTCCTGGGTTaGCTACCTCAGGCTTCCCCA +
Preference number: 2 (lower is better)
Translates to: RKHLSKRFMSRVHLTFDKSWLLG*LPQASP
Trigger: TGGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGA...CTTATCGAAGGTTAAATGGACTCTGCTCATAAACCTCTTACTGAGATGCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp ATTTATGCTAGAAGAAGGTTCCAGGCAATGCACGAGGCTGAGGTTCAGAGAAGAATCCTCTCAGCCTGTTaGACTCCAAGTCCATTCCTG +
Preference number: 2 (lower is better)
Translates to: IYARRRFQAMHEAEVQRRILSAC*TPSPFL
Trigger: CAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGAT...TCTTCTCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTCTTCTAGCATAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp AGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTCAACATGAAGCTGGCTaGATTCCACGAGGTACATGC +
Preference number: 2 (lower is better)
Translates to: RYVSQNPLHLSLTEKWPFQHEAG*IPRGTC
Trigger: GCATGTACCTCGTGGAATTCAGCCAGCTTCATGTTG...AAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp GATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGAGGGCTTCCTAGTTCTAAGAGGGGCTaGATGATCGTTCTGAACAAA +
Preference number: 2 (lower is better)
Translates to: DIGPGNASSQKQCHRGLPSSKRG*MIVLNK
Trigger: TTTGTTCAGAACGATCATCCAGCCCCTCTTAGAACT...AGGAAGCCCTCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440394.7
3UTR-3UTR CCA 90 bp CATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTATAGGAAGTTCTAAGAGGGGCTaGATGATCGTTCTGAACAAA +
Preference number: 2 (lower is better)
Translates to: HLLQLILPSRLVIVQVIGSSKRG*MIVLNK
Trigger: TTTGTTCAGAACGATCATCCAGCCCCTCTTAGAACT...TCCTATAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR-3UTR CCA 90 bp CATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCATGTCAGTTATAGGAAGCTGGTaGAGTGAGTCCACGGAGGAT +
Preference number: 2 (lower is better)
Translates to: HPLSLLNSKSIPGFILMSVIGSW*SESTED
Trigger: ATCCTCCGTGGACTCACTCCACCAGCTTCCTATAAC...TGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000588412.5
3UTR-3UTR CCA 90 bp CCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACCTCCAAGTCCATTCCTaGTTTCATTCTCATGTCAGA +
Preference number: 2 (lower is better)
Translates to: PAFQCWELSTWFTGTAMNLQVHS*FHSHVR
Trigger: TCTGACATGAGAATGAAACCAGGAATGGACTTGGAG...GTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp AGGAAGCATCTCAGTAAGAGGTTTATGAGCAGAGTCCATTTAACCTTCGATAAGGTGGTGGGAAGTTCCTaGACTGATGGGGCTGTGCTG +
Preference number: 2 (lower is better)
Translates to: RKHLSKRFMSRVHLTFDKVVGSS*TDGAVL
Trigger: CAGCACAGCCCCATCAGTCCAGGAACTTCCCACCAC...CTTATCGAAGGTTAAATGGACTCTGCTCATAAACCTCTTACTGAGATGCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp TCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACAAAACAGTCAAGGGCTGGTaGTGGGAAGTTCCTGGACTG +
Preference number: 2 (lower is better)
Translates to: STWFTGTAMNRIEVTDHKTVKGW*WEVPGL
Trigger: CAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGT...TTTGTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp ATAAAGCGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGCCTGCCTTTCAGTGCTaGGAGCTTTCTACATGGTTT +
Preference number: 2 (lower is better)
Translates to: IKRDANTPAFQCWELSTWPAFQC*ELSTWF
Trigger: AAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG...CCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCGCTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTTTCTCTAACTCATCCTaGAGCTGCCCCCGGGTCATC +
Preference number: 2 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFFSNSS*SCPRVI
Trigger: GATGACCCGGGGGCAGCTTCAGGATGAGTTAGAGAA...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR-3UTR TCA 90 bp AAGGCTGTTATCACACCGCAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTACATCTCTCCCTCACTaGGAAGTGGCCTTTTCAAGG +
Preference number: 2 (lower is better)
Translates to: KAVITPQFFTLWWIKRDATSLPH*EVAFSR
Trigger: CCTTGAAAAGGCCACTTCTCAGTGAGGGAGAGATGT...AGCATCTCGCTTTATCCACCATAACGTAAAGAACTGCGGTGTGATAACAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCAAACTCCTGCAGTTCTaGATTGTCCCGTTCACCTTT +
Preference number: 2 (lower is better)
Translates to: AERQSKMADVETVLESHFKLLQF*IVPFTF
Trigger: AAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTT...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000588412.5
3UTR-3UTR GCA 90 bp CCTAGTGTGATGGGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACGTCGGGACAATGGTCTaGTATCTGCTGAAGAATGGC +
Preference number: 2 (lower is better)
Translates to: PSVMGVGHLVKCWFNDLDVGTMV*YLLKNG
Trigger: GCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC...GTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCCCATCACACTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440394.7
3UTR-3UTR GCA 90 bp GGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACGAAGGTTCCAGGCAATaGACGAGGCTGAGGTTCAGA +
Preference number: 2 (lower is better)
Translates to: GVGHLVKCWFNDLDSMRHEGSRQ*TRLRFR
Trigger: TCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTC...GTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp AAGGCTGTTATCACACCGCAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTACTCCTGCCTTTCAGTaGTGGGAGCTTTCTACATGG +
Preference number: 2 (lower is better)
Translates to: KAVITPQFFTLWWIKRDATPAFQ*WELSTW
Trigger: CCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGT...AGCATCTCGCTTTATCCACCATAACGTAAAGAACTGCGGTGTGATAACAGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp GATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGAGGGCTTCCTAAATTAAGGGCAACCTaGACTGAGTTTTCAAGGCTA +
Preference number: 2 (lower is better)
Translates to: DIGPGNASSQKQCHRGLPKLRAT*TEFSRL
Trigger: TAGCCTTGAAAACTCAGTGCAGGTTGCCCTTAATTT...AGGAAGCCCTCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp TCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGCCACGTTTAGACATTGGTTTGGGGTaGAGATCTTTAGGTGCTAAA +
Preference number: 2 (lower is better)
Translates to: SESYKLHPLCPTARRPRLDIGLG*RSLGAK
Trigger: TTTAGCACCTAAAGATCTGCACCCCAAACCAATGTC...TAAACGTGGCCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGCTATCTGCTGAAGAATaGCGTTGGCAAACTCCTGCA +
Preference number: 2 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVLSAEE*RWQTPA
Trigger: TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAG...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR-3UTR CCA 90 bp GCTACGTCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCTCTTTTCTTGGCTCCTaGGTTGACTACCTCAGGCTT +
Preference number: 2 (lower is better)
Translates to: ATSLTMPIPSLICSLGVSSFLGS*VDYLRL
Trigger: AAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGA...GCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGACGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACGAAGTTTGTAGTGTTTaGTGCCAAGAAGGTTCCGGG +
Preference number: 2 (lower is better)
Translates to: TPQYDNVNSLKQERLVENEVCSV*CQEGSG
Trigger: CCCGGAACCTTCTTGGCACCAAACACTACAAACTTC...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
3UTR-3UTR CCA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACCTGCTGATGACCAGGTaGCAGTTCTTCAGAGAGATT +
Preference number: 2 (lower is better)
Translates to: TPQYDNVNSLKQERLVENLLMTR*QFFREI
Trigger: AATCTCTCTGAAGAACTGCCACCTGGTCATCAGCAG...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
3UTR-3UTR CCA 90 bp AGGGTCACGCTATGTTGCCCTGGCTGGTGCTCTTTCAACCTCACATGTTCTTCAACAAAGCATCTCATGTaGAAAGTAAGCAGAAGAGAC +
Preference number: 2 (lower is better)
Translates to: RVTLCCPGWCSFNLTCSSTKHLM*KVSRRD
Trigger: GTCTCTTCTGCTTACTTTCCACATGAGATGCTTTGT...TGAAGAACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACATAGCGTGACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
3UTR CAA 90 bp GAGGGGCATGGAATGACAAGTCCTAGTGTGATGGGAGTGGGACATTaGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACTCT +
Preference number: 2 (lower is better)
Translates to: EGHGMTSPSVMGVGH*VKCWFNDLDSMRHS
Trigger: AGAGTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCCCATCACACTAGGACTTGTCATTCCATGCCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTATGGTCTGCTATCTGCTaGAGAATGGCGTTGGCAAAC +
Preference number: 2 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVWSAIC*RMALAN
Trigger: GTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCA...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000588412.5
3UTR-3UTR TCA 90 bp CAGACAGATGATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGATCACACTTCTTCAAGTaGGCAAGTTGGGATGAAGTT +
Preference number: 2 (lower is better)
Translates to: QTDDIGPGNASSQKQCHRSHFFK*ASWDEV
Trigger: AACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGA...TCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATCATCTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR TCA 90 bp AAACCCCGTTGGGATCACACCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTCTGCCTAATTATTTATaGCTGCTGTTGTCTACGCTA +
Preference number: 2 (lower is better)
Translates to: KPRWDHTHSSSCPLYGDILPNYL*LLLSTL
Trigger: TAGCGTAGACAACAGCAGTCATAAATAATTAGGCAG...AATGTCACCATAAAGAGGGCACGAAGAAGAGTGGGTGTGATCCCAACGGGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp TGCTATTTACTGCTTCAACTCCAGCAGGTATGTCTCACAGAATCCACTACATCTGTTTGTAGTGTTTGGTaGCAAGAAGGTTCCGGGCAC +
Preference number: 2 (lower is better)
Translates to: CYLLLQLQQVCLTESTTSVCSVW*QEGSGH
Trigger: GTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC...AGATGTAGTGGATTCTGTGAGACATACCTGCTGGAGTTGAAGCAGTAAATAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp TGCTATTTACTGCTTCAACTCCAGCAGGTATGTCTCACAGAATCCACTACATCTTGTTGCCCTGGCTGGTaGTCTTTCAACCTCACATGT +
Preference number: 2 (lower is better)
Translates to: CYLLLQLQQVCLTESTTSCCPGW*SFNLTC
Trigger: ACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACA...AGATGTAGTGGATTCTGTGAGACATACCTGCTGGAGTTGAAGCAGTAAATAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp ATGACTGCTGTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATTGATTGGAGATGTGAGTGTCTaGTGGGTTCTGGTGGTAGAG +
Preference number: 2 (lower is better)
Translates to: MTAVVYATSLTMPIPSLIGDVSV*WVLVVE
Trigger: CTCTACCACCAGAACCCAGCAGACACTCACATCTCC...AATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAACAGCAGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp CAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTAACACTCCTGCCTTTCAGGAAGTTTGTAGTGTTTaGTGCCAAGAAGGTTCCGGG +
Preference number: 2 (lower is better)
Translates to: QFFTLWWIKRDANTPAFQEVCSV*CQEGSG
Trigger: CCCGGAACCTTCTTGGCACCAAACACTACAAACTTC...CTGAAAGGCAGGAGTGTTAGCATCTCGCTTTATCCACCATAACGTAAAGAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp TTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACTCTGAAAGCTACAGCTCTCTGGTCCATTaGAGGCATCCTCTCAGCCTG +
Preference number: 2 (lower is better)
Translates to: LVKCWFNDLDSMRHSESYSSLVH*RHPLSL
Trigger: CAGGCTGAGAGGATGCCTCCAATGGACCAGAGAGCT...GTAGCTTTCAGAGTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp AAACCCCGTTGGGATCACACCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTACAAAGCATCTCATGTaGAAAGTAAGCAGAAGAGAC +
Preference number: 2 (lower is better)
Translates to: KPRWDHTHSSSCPLYGDITKHLM*KVSRRD
Trigger: GTCTCTTCTGCTTACTTTCCACATGAGATGCTTTGT...AATGTCACCATAAAGAGGGCACGAAGAAGAGTGGGTGTGATCCCAACGGGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp TTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACTCTGAAAGCTACACAGTCAAGGGCTGGTaGTGGGAAGTTCCTGGACTG +
Preference number: 2 (lower is better)
Translates to: LVKCWFNDLDSMRHSESYTVKGW*WEVPGL
Trigger: CAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGT...GTAGCTTTCAGAGTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp CTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACCCTGCCTTTCAGTGCTaGGAGCTTTCTACATGGTTT +
Preference number: 2 (lower is better)
Translates to: LSTWFTGTAMNRIEVTDHPAFQC*ELSTWF
Trigger: AAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG...GTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR CAA 90 bp TGTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATTGATTaGCAGTCTTGGGGTCAGCTTTCTGATTTGCAACATGAAGCTGGC +
Preference number: 2 (lower is better)
Translates to: CCLRYVLNNANTFID*QSWGQLSDLQHEAG
Trigger: GCCAGCTTCATGTTGCAAATCAGAAAGCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp CTAACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAGTTCTAAGAGGGGCTaGATGATCGTTCTGAACAAA +
Preference number: 2 (lower is better)
Translates to: LTPQYDNVNSLKQERLVESSKRG*MIVLNK
Trigger: TTTGTTCAGAACGATCATCCAGCCCCTCTTAGAACT...CTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000588412.5
3UTR-3UTR CCA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTACTATCTGCTGAAGAATaGCGTTGGCAAACTCCTGCA +
Preference number: 2 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVLSAEE*RWQTPA
Trigger: TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAG...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000588412.5
3UTR-3UTR CCA 90 bp AGGAAGCATCTCAGTAAGAGGTTTATGAGCAGAGTCCATTTAACCTTCGATAAGAACAGGAGAGACTGGTaGAGAACACCTCACACCATC +
Preference number: 2 (lower is better)
Translates to: RKHLSKRFMSRVHLTFDKNRRDW*RTPHTI
Trigger: GATGGTGTGAGGTGTTCTCCACCAGTCTCTCCTGTT...CTTATCGAAGGTTAAATGGACTCTGCTCATAAACCTCTTACTGAGATGCTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp CAGACAGATGATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGACAGTTCTTTACGTTATaGTGGATAAAGCGAGATGCT +
Preference number: 2 (lower is better)
Translates to: QTDDIGPGNASSQKQCHRQFFTL*WIKRDA
Trigger: AGCATCTCGCTTTATCCACCATAACGTAAAGAACTG...TCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATCATCTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR CAA 90 bp ACTGCTGTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATaGATTTGCAGTCTTGGGGTCAGCTTTCTGATTTGCAACATGAAG +
Preference number: 2 (lower is better)
Translates to: TAVVYATSLTMPIPS*ICSLGVSFLICNMK
Trigger: CTTCATGTTGCAAATCAGAAAGCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAACAGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp AAACCCCGTTGGGATCACACCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTTGGTATCAAAGTCCTTaGAAATCTCAATTGAGATAC +
Preference number: 2 (lower is better)
Translates to: KPRWDHTHSSSCPLYGDIWYQSP*KSQLRY
Trigger: GTATCTCAATTGAGATTTGCAAGGACTTTGATACCA...AATGTCACCATAAAGAGGGCACGAAGAAGAGTGGGTGTGATCCCAACGGGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp CCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTGGTTTGGGGTGCAGATCTTTGGTATCAAAGTCCTTaGAAATCTCAATTGAGATAC +
Preference number: 2 (lower is better)
Translates to: PTLLRALFMVTLVWGADLWYQSP*KSQLRY
Trigger: GTATCTCAATTGAGATTTGCAAGGACTTTGATACCA...AAGATCTGCACCCCAAACCAATGTCACCATAAAGAGGGCACGAAGAAGAGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTCTATCTGCTGAAGAATaGCGTTGGCAAACTCCTGCA +
Preference number: 2 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFLSAEE*RWQTPA
Trigger: TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAG...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR-3UTR CCA 90 bp CTAACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGACAAAGCATCTCATGTaGAAAGTAAGCAGAAGAGAC +
Preference number: 2 (lower is better)
Translates to: LTPQYDNVNSLKQERLVETKHLM*KVSRRD
Trigger: GTCTCTTCTGCTTACTTTCCACATGAGATGCTTTGT...CTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
3UTR-3UTR TCA 90 bp AGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTTCACACTTCTTCAAGTaGGCAAGTTGGGATGAAGTT +
Preference number: 2 (lower is better)
Translates to: SSSERFDPLSTLDIKKVSSHFFK*ASWDEV
Trigger: AACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGA...ACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
3UTR-3UTR GCA 90 bp TTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACTCTGAAAGCTACATTCCACGAGGTACATaGAGATGTCAGGAAATGGCC +
Preference number: 2 (lower is better)
Translates to: LVKCWFNDLDSMRHSESYIPRGT*RCQEMA
Trigger: GGCCATTTCCTGACATCTGCATGTACCTCGTGGAAT...GTAGCTTTCAGAGTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp TCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACAAAACCCTTTATCTACCCTaGACATCAAGAAGGTTAGTG +
Preference number: 2 (lower is better)
Translates to: STWFTGTAMNRIEVTDHKTLYLP*TSRRLV
Trigger: CACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGT...TTTGTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR GCA 90 bp CAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTAACACTCCTGCCTTTCAGCTAATTATTTATGACTaGTGTTGTCTACGCTACGTC +
Preference number: 2 (lower is better)
Translates to: QFFTLWWIKRDANTPAFQLIIYD*CCLRYV
Trigger: GACGTAGCGTAGACAACAGCAGTCATAAATAATTAG...CTGAAAGGCAGGAGTGTTAGCATCTCGCTTTATCCACCATAACGTAAAGAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp TCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACAAAATTGATTTGCAGTCTTaGGGTCAGCTTTCTGATTTG +
Preference number: 2 (lower is better)
Translates to: STWFTGTAMNRIEVTDHKIDLQS*GQLSDL
Trigger: CAAATCAGAAAGCTGACCCCAAGACTGCAAATCAAT...TTTGTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp TTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACTCTGAAAGCTACCTCCAAGTCCATTCCTaGTTTCATTCTCATGTCAGA +
Preference number: 2 (lower is better)
Translates to: LVKCWFNDLDSMRHSESYLQVHS*FHSHVR
Trigger: TCTGACATGAGAATGAAACCAGGAATGGACTTGGAG...GTAGCTTTCAGAGTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp AGGAAGCATCTCAGTAAGAGGTTTATGAGCAGAGTCCATTTAACCTTCGATAAGACAAAGCATCTCATGTaGAAAGTAAGCAGAAGAGAC +
Preference number: 2 (lower is better)
Translates to: RKHLSKRFMSRVHLTFDKTKHLM*KVSRRD
Trigger: GTCTCTTCTGCTTACTTTCCACATGAGATGCTTTGT...CTTATCGAAGGTTAAATGGACTCTGCTCATAAACCTCTTACTGAGATGCTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CCA 90 bp GGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACTTCTTTACGTTATGGTaGATAAAGCGAGATGCTAAC +
Preference number: 2 (lower is better)
Translates to: GVGHLVKCWFNDLDSMRHFFTLW*IKRDAN
Trigger: GTTAGCATCTCGCTTTATCCACCATAACGTAAAGAA...GTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR GCA 72 bp CAGCAGCCACTGGGCTGCAGGAGCTCAGGACACGGGTaGTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAG +
Preference number: 3 (lower is better)
Translates to: QQPLGCRSSGHG*WQGRQPLGGVQ
Trigger: CTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGCCCAGTGGCTGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR GCA 72 bp AGGGAGCAGTCACAGGCCCCACTGGATATCCTGCAATaGCCGGCAGGTGCCTGGGCTAGTCCTGCGATGGGC +
Preference number: 3 (lower is better)
Translates to: REQSQAPLDILQ*PAGAWASPAMG
Trigger: GCCCATCGCAGGACTAGCCCAGGCACCTGCCGGGCATTGCAGGATATCCAGTGGGGCCTGTGACTGCTCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR GCA 72 bp GATGAGAAAGTCCACGTGGGTGGGATCTGGGCCACCTaGTTGGAGAGAGCAGCTGGCCAGTGCCCGTGCCAG +
Preference number: 3 (lower is better)
Translates to: DEKVHVGGIWAT*LERAAGQCPCQ
Trigger: CTGGCACGGGCACTGGCCAGCTGCTCTCTCCAAGCAGGTGGCCCAGATCCCACCCACGTGGACTTTCTCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR GCA 72 bp GCATCAGGGAGCAGTCACAGGCCCCACTGGATATCCTaGAATGCCCGGCAGGTGCCTGGGCTAGTCCTGCGA +
Preference number: 3 (lower is better)
Translates to: ASGSSHRPHWIS*NARQVPGLVLR
Trigger: TCGCAGGACTAGCCCAGGCACCTGCCGGGCATTGCAGGATATCCAGTGGGGCCTGTGACTGCTCCCTGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CCA 72 bp CAGGCTCCAGGCTGGCCAGTGCTCACCCGTGCTGGGTaGTCACTGGAAGAGATAGCACCAAGTGGGCAGGAG +
Preference number: 3 (lower is better)
Translates to: QAPGWPVLTRAG*SLEEIAPSGQE
Trigger: CTCCTGCCCACTTGGTGCTATCTCTTCCAGTGACCACCCAGCACGGGTGAGCACTGGCCAGCCTGGAGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp GCGGCCTCACTCTGCAGAGGGTGCCTGCTGCATTGCAGTCTCTTCTCATCCTTCGCCTCGCCTGCTGTCTaGGTTCCACCGTGGCCCCGT +
Preference number: 3 (lower is better)
Translates to: AASLCRGCLLHCSLFSSFASPAV*VPPWPR
Trigger: ACGGGGCCACGGTGGAACCAAGACAGCAGGCGAGGC...GAAGGATGAGAAGAGACTGCAATGCAGCAGGCACCCTCTGCAGAGTGAGGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp CAGGCGCTGCACCTGATGAGAAAGTCCACGTGGGTGGGATCTGGGCCACCTGCTCCCGTGCCAGACCACTaGTTTAGGCATGGCCTCGCC +
Preference number: 3 (lower is better)
Translates to: QALHLMRKSTWVGSGPPAPVPDH*FRHGLA
Trigger: GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGG...AGCAGGTGGCCCAGATCCCACCCACGTGGACTTTCTCATCAGGTGCAGCGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR GCA 72 bp GCGTGGTGTGGAATGAGGGGCTGGACCCAGAGGGCCTaGTTTGGCCGGGGTGAATTCTCTGGCTTCAGTAGG +
Preference number: 3 (lower is better)
Translates to: AWCGMRGWTQRA*FGRGEFSGFSR
Trigger: CCTACTGAAGCCAGAGAATTCACCCCGGCCAAAGCAGGCCCTCTGGGTCCAGCCCCTCATTCCACACCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CCA 72 bp CTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTaGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACG +
Preference number: 3 (lower is better)
Translates to: LRTRVLARQAAS*RCSGETSPRAT
Trigger: CGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR CCA 72 bp GGGTGGGATCTGGGCCACCTGCTTGGAGAGAGCAGCTaGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCAT +
Preference number: 3 (lower is better)
Translates to: GWDLGHLLGESS*PVPVPDHLFRH
Trigger: ATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTCTCCAAGCAGGTGGCCCAGATCCCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR CCA 72 bp GGACAGTCTGTTCCACCTGGATTGCAGGCTCCAGGCTaGCCAGTGCTCACCCGTGCTGGGTGGTCACTGGAA +
Preference number: 3 (lower is better)
Translates to: GQSVPPGLQAPG*PVLTRAGWSLE
Trigger: TTCCAGTGACCACCCAGCACGGGTGAGCACTGGCCAGCCTGGAGCCTGCAATCCAGGTGGAACAGACTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp CCACTGGGCTGCAGGAGCTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTATGAAGACTCAGACCTaGGGAGAACGAGTGCTCCCA +
Preference number: 3 (lower is better)
Translates to: PLGCRSSGHGCWQGRQPLMKTQT*GERVLP
Trigger: TGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCAT...AAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGCCCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR TCA 72 bp TGCAGTAGATGGATGCAATACTGGCGTGGTGTGGAATaGGGGGCTGGACCCAGAGGGCCTGCTTTGGCCGGG +
Preference number: 3 (lower is better)
Translates to: CSRWMQYWRGVE*GAGPRGPALAG
Trigger: CCCGGCCAAAGCAGGCCCTCTGGGTCCAGCCCCTCATTCCACACCACGCCAGTATTGCATCCATCTACTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR GCA 72 bp GGAACTGACATGGAGGACAGTCTGTTCCACCTGGATTaGAGGCTCCAGGCTGGCCAGTGCTCACCCGTGCTG +
Preference number: 3 (lower is better)
Translates to: GTDMEDSLFHLD*RLQAGQCSPVL
Trigger: CAGCACGGGTGAGCACTGGCCAGCCTGGAGCCTGCAATCCAGGTGGAACAGACTGTCCTCCATGTCAGTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CCA 72 bp CAGGAGGGCGGGATGGTTCTGGGAGGAACAGGACTCTaGCAGCAAATCCAAATGCCAGTGGATGGGCGGCTC +
Preference number: 3 (lower is better)
Translates to: QEGGMVLGGTGL*QQIQMPVDGRL
Trigger: GAGCCGCCCATCCACTGGCATTTGGATTTGCTGCCAGAGTCCTGTTCCTCCCAGAACCATCCCGCCCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CCA 72 bp TCTTCTGACGCATCAGGGAGCAGTCACAGGCCCCACTaGATATCCTGCAATGCCCGGCAGGTGCCTGGGCTA +
Preference number: 3 (lower is better)
Translates to: SSDASGSSHRPH*ISCNARQVPGL
Trigger: TAGCCCAGGCACCTGCCGGGCATTGCAGGATATCCAGTGGGGCCTGTGACTGCTCCCTGATGCGTCAGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp GTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCATTCTTGGCTCCTGGGTaGACTACCTCAGGCTTCCCC +
Preference number: 3 (lower is better)
Translates to: VRGQEVRGSSAPWLSVRAFLAPG*TTSGFP
Trigger: GGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAA...TGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
3UTR-3UTR CAA 90 bp CTTCCTCCTCAGTTCCGAACCCAGGCAGGTGAAGAGGAGGCCAGGAGCAGATGTGGGGTTTTTGCCATCTaGGCCAGGCTGGCCTCGAAC +
Preference number: 3 (lower is better)
Translates to: LPPQFRTQAGEEEARSRCGVFAI*ARLASN
Trigger: GTTCGAGGCCAGCCTGGCCAAGATGGCAAAAACCCC...ACATCTGCTCCTGGCCTCCTCTTCACCTGCCTGGGTTCGGAACTGAGGAGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CCA 72 bp AGCCGCCTGGTCATCGTCCAAGTTATAGGAAGCTGGTaGAGTGAGTCCACGGAGGATCAGGGGGTCTCGGTC +
Preference number: 3 (lower is better)
Translates to: SRLVIVQVIGSW*SESTEDQGVSV
Trigger: GACCGAGACCCCCTGATCCTCCGTGGACTCACTCCACCAGCTTCCTATAACTTGGACGATGACCAGGCGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR CCA 72 bp CCAAGCCGCCTGGTCATCGTCCAAGTTATAGGAAGCTaGTGGAGTGAGTCCACGGAGGATCAGGGGGTCTCG +
Preference number: 3 (lower is better)
Translates to: PSRLVIVQVIGS*WSESTEDQGVS
Trigger: CGAGACCCCCTGATCCTCCGTGGACTCACTCCACCAGCTTCCTATAACTTGGACGATGACCAGGCGGCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR CCA 72 bp ATGGATGCAATACTGGCGTGGTGTGGAATGAGGGGCTaGACCCAGAGGGCCTGCTTTGGCCGGGGTGAATTC +
Preference number: 3 (lower is better)
Translates to: MDAILAWCGMRG*TQRACFGRGEF
Trigger: GAATTCACCCCGGCCAAAGCAGGCCCTCTGGGTCCAGCCCCTCATTCCACACCACGCCAGTATTGCATCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGGTCATGGCAGAGGGTaGTCAGGTGTCCAATGTACA +
Preference number: 3 (lower is better)
Translates to: QRTGGERLLCSMALCQGRGHGRG*SGVQCT
Trigger: TGTACATTGGACACCTGACAACCCTCTGCCATGACC...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000588412.5
3UTR-3UTR CAA 90 bp CCATGCAGTATTAGGCACACTGAGCTAGAACCCACGTCGGGTGAGGGTGGTTATCCCGTGCCAGACCACTaGTTTAGGCATGGCCTCGCC +
Preference number: 3 (lower is better)
Translates to: PCSIRHTELEPTSGEGGYPVPDH*FRHGLA
Trigger: GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGG...ATAACCACCCTCACCCGACGTGGGTTCTAGCTCAGTGTGCCTAATACTGCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR TCA 72 bp CCTGGTCATCGTCCAAGTTATAGGAAGCTGGTGGAGTaGGTCCACGGAGGATCAGGGGGTCTCGGTCATGGC +
Preference number: 3 (lower is better)
Translates to: PGHRPSYRKLVE*VHGGSGGLGHG
Trigger: GCCATGACCGAGACCCCCTGATCCTCCGTGGACTCACTCCACCAGCTTCCTATAACTTGGACGATGACCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR TCA 72 bp TCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATCGTaGGGCCTGCTCACAGCTCCCCGGTACAAAGCATCT +
Preference number: 3 (lower is better)
Translates to: SDLGRTSAPKPS*GLLTAPRYKAS
Trigger: AGATGCTTTGTACCGGGGAGCTGTGAGCAGGCCTCACGATGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
3UTR GCA 72 bp TTGGGAGAACGAGTGCTCCCAAGCCATCGTGAGGCCTaGTCACAGCTCCCCGGTACAAAGCATCTCATGTGG +
Preference number: 3 (lower is better)
Translates to: LGERVLPSHREA*SQLPGTKHLMW
Trigger: CCACATGAGATGCTTTGTACCGGGGAGCTGTGAGCAGGCCTCACGATGGCTTGGGAGCACTCGTTCTCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
3UTR GCA 72 bp CCAGGCAGGGGCTTCAGGGTCAAGCCCAGGTTACCATaGAGTATTAGGCACACTGAGCTAGAACCCACGTCG +
Preference number: 3 (lower is better)
Translates to: PGRGFRVKPRLP*SIRHTELEPTS
Trigger: CGACGTGGGTTCTAGCTCAGTGTGCCTAATACTGCATGGTAACCTGGGCTTGACCCTGAAGCCCCTGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CCA 72 bp CTGACACAGGGTCCGCTGGGCTTGAGAAATGCCATGTaGTGTCACACTCCACGCAGCGGTCTTCTCTGCTTG +
Preference number: 3 (lower is better)
Translates to: LTQGPLGLRNAM*CHTPRSGLLCL
Trigger: CAAGCAGAGAAGACCGCTGCGTGGAGTGTGACACCACATGGCATTTCTCAAGCCCAGCGGACCCTGTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CCA 72 bp GTAGCTGCAGTAGATGGATGCAATACTGGCGTGGTGTaGAATGAGGGGCTGGACCCAGAGGGCCTGCTTTGG +
Preference number: 3 (lower is better)
Translates to: VAAVDGCNTGVV*NEGLDPEGLLW
Trigger: CCAAAGCAGGCCCTCTGGGTCCAGCCCCTCATTCCACACCACGCCAGTATTGCATCCATCTACTGCAGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGATCCTGCAGTTCTGCATaGTCCCGTTCACCTTTCTCT +
Preference number: 3 (lower is better)
Translates to: QRTGGERLLCSMALCQGRSCSSA*SRSPFS
Trigger: AGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGA...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000588412.5
3UTR-3UTR CAA 90 bp GCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGCCTCACACCATCTTCTaGTTAACTGGCCGAGGAACA +
Preference number: 3 (lower is better)
Translates to: ARQAASWRCSGETSPRATPHTIF*LTGRGT
Trigger: TGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGG...CGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp CCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTCCTCACACCATCTTCTaGTTAACTGGCCGAGGAACA +
Preference number: 3 (lower is better)
Translates to: PVPVPDHLFRHGLACCLGPHTIF*LTGRGT
Trigger: TGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGG...ACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR TCA 72 bp GGCCTCGCCTGCTGTCTTGGTTCCACCGTGGCCCCGTaGAGGCTGTTATCACACCGCAGTTCTTTACGTTAT +
Preference number: 3 (lower is better)
Translates to: GLACCLGSTVAP*RLLSHRSSLRY
Trigger: ATAACGTAAAGAACTGCGGTGTGATAACAGCCTTCACGGGGCCACGGTGGAACCAAGACAGCAGGCGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR GCA 72 bp GTGCTGCCCTCAGGATGTGTAGCTGCAGTAGATGGATaGAATACTGGCGTGGTGTGGAATGAGGGGCTGGAC +
Preference number: 3 (lower is better)
Translates to: VLPSGCVAAVDG*NTGVVWNEGLD
Trigger: GTCCAGCCCCTCATTCCACACCACGCCAGTATTGCATCCATCTACTGCAGCTACACATCCTGAGGGCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATTCTTGGCTCCTGGGTaGACTACCTCAGGCTTCCCC +
Preference number: 3 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPFLAPG*TTSGFP
Trigger: GGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAA...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
3UTR-3UTR CAA 90 bp CCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTGGTTTGGGGTGCAGATCTTCCCGTGCCAGACCACTaGTTTAGGCATGGCCTCGCC +
Preference number: 3 (lower is better)
Translates to: PTLLRALFMVTLVWGADLPVPDH*FRHGLA
Trigger: GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGG...AAGATCTGCACCCCAAACCAATGTCACCATAAAGAGGGCACGAAGAAGAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR TCA 72 bp CACTCTGCCCTACAGCACGAAGGCCACGTTTATTACTaGACTCCTAGCCAGCCTCCAGTGCCCAAGAACGGT +
Preference number: 3 (lower is better)
Translates to: HSALQHEGHVYY*TPSQPPVPKNG
Trigger: ACCGTTCTTGGGCACTGGAGGCTGGCTAGGAGTTCAGTAATAAACGTGGCCTTCGTGCTGTAGGGCAGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR GCA 72 bp CAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTaGTCTAGGATGTCGGGACAATGGTCTGCTATCTGC +
Preference number: 3 (lower is better)
Translates to: QGQEDSSRALTT*SRMSGQWSAIC
Trigger: GCAGATAGCAGACCATTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR GCA 72 bp CCCAAGAGCAACGGGCATCTGTTACTGGGGCAAAGCTaGAGGCGGGGACAACAGGGTCTCATATGTCAACTT +
Preference number: 3 (lower is better)
Translates to: PKSNGHLLLGQS*RRGQQGLICQL
Trigger: AAGTTGACATATGAGACCCTGTTGTCCCCGCCTGCAGCTTTGCCCCAGTAACAGATGCCCGTTGCTCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR GCA 72 bp CGGGTGCACGTGCATCCCAGACACCACCATGGAGGCTaGTACTGTTACCAAAAGGAACTCAAGCTACAAGGG +
Preference number: 3 (lower is better)
Translates to: RVHVHPRHHHGG*YCYQKELKLQG
Trigger: CCCTTGTAGCTTGAGTTCCTTTTGGTAACAGTAGCAGCCTCCATGGTGGTGTCTGGGATGCACGTGCACCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CCA 72 bp GGAGTGAGTCCACGGAGGATCAGGGGGTCTCGGTCATaGCAGAGGGTTGTCAGGTGTCCAATGTACAACTTT +
Preference number: 3 (lower is better)
Translates to: GVSPRRIRGSRS*QRVVRCPMYNF
Trigger: AAAGTTGTACATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGGACTCACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR-3UTR CAA 90 bp CGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGACTCTTCCAGGGCGTaGACCACTTGCTCTAGGATG +
Preference number: 3 (lower is better)
Translates to: RAPVPRSSLFLAPGLTTSDSSRA*TTCSRM
Trigger: CATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTC...TGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR-3UTR CAA 90 bp CAGGCGCTGCACCTGATGAGAAAGTCCACGTGGGTGGGATCTGGGCCACCTGCTAATACCTTCATTGATTaGCAGTCTTGGGGTCAGCTT +
Preference number: 3 (lower is better)
Translates to: QALHLMRKSTWVGSGPPANTFID*QSWGQL
Trigger: AAGCTGACCCCAAGACTGCAAATCAATGAAGGTATT...AGCAGGTGGCCCAGATCCCACCCACGTGGACTTTCTCATCAGGTGCAGCGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp CCATGCAGTATTAGGCACACTGAGCTAGAACCCACGTCGGGTGAGGGTGGTTATAAAGGGCAACTAGACTaGCCGATGGAGGGGTTTGGG +
Preference number: 3 (lower is better)
Translates to: PCSIRHTELEPTSGEGGYKGQLD*PMEGFG
Trigger: CCCAAACCCCTCCATCGGCAAGTCTAGTTGCCCTTT...ATAACCACCCTCACCCGACGTGGGTTCTAGCTCAGTGTGCCTAATACTGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp CCATGCAGTATTAGGCACACTGAGCTAGAACCCACGTCGGGTGAGGGTGGTTATACACTGAAGGCGGCCTaGGGTCCAGTCTGCTTTACA +
Preference number: 3 (lower is better)
Translates to: PCSIRHTELEPTSGEGGYTLKAA*GPVCFT
Trigger: TGTAAAGCAGACTGGACCCAAGGCCGCCTTCAGTGT...ATAACCACCCTCACCCGACGTGGGTTCTAGCTCAGTGTGCCTAATACTGCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR TCA 72 bp ATTCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTaGGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGG +
Preference number: 3 (lower is better)
Translates to: IPGFILMSEDRR*EAPLLHGSLSG
Trigger: CCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
3UTR CCA 72 bp CTGGTGGAGAACACCTCACACCATCTTCTTGTTAACTaGCCGAGGAACAGAGTGAGGAAGGCTGCGACAGAC +
Preference number: 3 (lower is better)
Translates to: LVENTSHHLLVN*PRNRVRKAATD
Trigger: GTCTGTCGCAGCCTTCCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGGTGTTCTCCACCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
3UTR CCA 72 bp AATCTGACCATGTCAGTTAATGGGACAGTCAAGGGCTaGTGGTGGGAAGTTCCTGGACTGATGGGGCTGTGC +
Preference number: 3 (lower is better)
Translates to: NLTMSVNGTVKG*WWEVPGLMGLC
Trigger: GCACAGCCCCATCAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGTCCCATTAACTGACATGGTCAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR CCA 72 bp CTCACTCTGGGGGTGGGTGAGCCCGCAAGTTCCTCATaGAAAACCAGACTTCAATGGACAGAAATTGAGGGG +
Preference number: 3 (lower is better)
Translates to: LTLGVGEPASSS*KTRLQWTEIEG
Trigger: CCCCTCAATTTCTGTCCATTGAAGTCTGGTTTTCCATGAGGAACTTGCGGGCTCACCCACCCCCAGAGTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CCA 72 bp CTACACTCAAGTAACATGGTCAACAGGAGGGCGGGATaGTTCTGGGAGGAACAGGACTCTGGCAGCAAATCC +
Preference number: 3 (lower is better)
Translates to: LHSSNMVNRRAG*FWEEQDSGSKS
Trigger: GGATTTGCTGCCAGAGTCCTGTTCCTCCCAGAACCATCCCGCCCTCCTGTTGACCATGTTACTTGAGTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTGGTCATGGCAGAGGGTaGTCAGGTGTCCAATGTACA +
Preference number: 3 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTGHGRG*SGVQCT
Trigger: TGTACATTGGACACCTGACAACCCTCTGCCATGACC...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR-3UTR CAA 90 bp GCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTAAGGCAGGCAGCCTCTaGGAGGTGTTCAGGGGAAAC +
Preference number: 3 (lower is better)
Translates to: AGMSHRIHYISPSLRSGLKAGSL*EVFRGN
Trigger: GTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTT...AAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp CTTCCTCCTCAGTTCCGAACCCAGGCAGGTGAAGAGGAGGCCAGGAGCAGATGTTTCAATGGACAGAAATaGAGGGGCAAGTCACAATGC +
Preference number: 3 (lower is better)
Translates to: LPPQFRTQAGEEEARSRCFNGQK*RGKSQC
Trigger: GCATTGTGACTTGCCCCTCAATTTCTGTCCATTGAA...ACATCTGCTCCTGGCCTCCTCTTCACCTGCCTGGGTTCGGAACTGAGGAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CCA 72 bp CGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTaGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCAC +
Preference number: 3 (lower is better)
Translates to: RDNGLLSAEEWR*QTPAVLHCPVH
Trigger: GTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR CCA 72 bp GGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATaGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCC +
Preference number: 3 (lower is better)
Translates to: GCRDNGLLSAEE*RWQTPAVLHCP
Trigger: GGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR CCA 72 bp TCAAGTAACATGGTCAACAGGAGGGCGGGATGGTTCTaGGAGGAACAGGACTCTGGCAGCAAATCCAAATGC +
Preference number: 3 (lower is better)
Translates to: SSNMVNRRAGWF*EEQDSGSKSKC
Trigger: GCATTTGGATTTGCTGCCAGAGTCCTGTTCCTCCCAGAACCATCCCGCCCTCCTGTTGACCATGTTACTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp CGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGACTCTTCCAGGGCGTaGACCACTTGCTCTAGGATG +
Preference number: 3 (lower is better)
Translates to: RDANTPAFQCWELSTWFTDSSRA*TTCSRM
Trigger: CATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTC...CGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355446.9
ENST00000440394.7
3UTR-3UTR CAA 90 bp ACACACCTTAAGATCGGGGAGGGGAAGGACATGCTATTTACTGCTTCAACTCCATTCTTGGCTCCTGGGTaGACTACCTCAGGCTTCCCC +
Preference number: 3 (lower is better)
Translates to: THLKIGEGKDMLFTASTPFLAPG*TTSGFP
Trigger: GGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAA...TGGAGTTGAAGCAGTAAATAGCATGTCCTTCCCCTCCCCGATCTTAAGGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp CCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACATGAAGACTCAGACCTaGGGAGAACGAGTGCTCCCA +
Preference number: 3 (lower is better)
Translates to: PAFQCWELSTWFTGTAMNMKTQT*GERVLP
Trigger: TGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCAT...GTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp AGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTTTCTTGGCTCCTGGGTaGACTACCTCAGGCTTCCCC +
Preference number: 3 (lower is better)
Translates to: RYVSQNPLHLSLTEKWPFFLAPG*TTSGFP
Trigger: GGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAA...AAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp GAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGATGAAGACTCAGACCTaGGGAGAACGAGTGCTCCCA +
Preference number: 3 (lower is better)
Translates to: EMLTLLPFSAGSFLHGLRMKTQT*GERVLP
Trigger: TGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCAT...CCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp GTGCACGTGCATCCCAGACACCACCATGGAGGCTGCTACTGTTACCAAAAGGAAGGTCAAGAAGATTCCTaGCTGTTCACAGAGACCAGA +
Preference number: 3 (lower is better)
Translates to: VHVHPRHHHGGCYCYQKEGQEDS*LFTETR
Trigger: TCTGGTCTCTGTGAACAGCAAGGAATCTTCTTGACC...TTCCTTTTGGTAACAGTAGCAGCCTCCATGGTGGTGTCTGGGATGCACGTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp GTGCTGCCCTCAGGATGTGTAGCTGCAGTAGATGGATGCAATACTGGCGTGGTGCTCTTTATGGTGACATaGGTTTGGGGTGCAGATCTT +
Preference number: 3 (lower is better)
Translates to: VLPSGCVAAVDGCNTGVVLFMVT*VWGADL
Trigger: AAGATCTGCACCCCAAACCAATGTCACCATAAAGAG...CACCACGCCAGTATTGCATCCATCTACTGCAGCTACACATCCTGAGGGCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR TCA 72 bp TGCTCTAGGATGTCGGGACAATGGTCTGCTATCTGCTaGAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCA +
Preference number: 3 (lower is better)
Translates to: CSRMSGQWSAIC*RMALANSCSSA
Trigger: TGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCCTAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR CCA 72 bp ACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTaGCAGTTCTTCAGAGAGATTCGACCCTTTATCTAC +
Preference number: 3 (lower is better)
Translates to: TSSHSSPLLMTR*QFFREIRPFIY
Trigger: GTAGATAAAGGGTCGAATCTCTCTGAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
3UTR-3UTR CAA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCGGTCATGGCAGAGGGTaGTCAGGTGTCCAATGTACA +
Preference number: 3 (lower is better)
Translates to: AERQSKMADVETVLESHFGHGRG*SGVQCT
Trigger: TGTACATTGGACACCTGACAACCCTCTGCCATGACC...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000588412.5
3UTR-3UTR CAA 90 bp TGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCCGTAGTTCTCTTTTCTaGGCTCCTGGGTTGACTACC +
Preference number: 3 (lower is better)
Translates to: WRHPLSLLNSKSIPGFILRSSLF*APGLTT
Trigger: GGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACG...GAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
3UTR-3UTR CAA 90 bp CGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGCATCCTCTCAGCCTGTaGAACTCCAAGTCCATTCCT +
Preference number: 3 (lower is better)
Translates to: RDANTPAFQCWELSTWFTHPLSL*NSKSIP
Trigger: AGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG...CGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp AAGGCTGTTATCACACCGCAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTAAGGCAGGCAGCCTCTaGGAGGTGTTCAGGGGAAAC +
Preference number: 3 (lower is better)
Translates to: KAVITPQFFTLWWIKRDAKAGSL*EVFRGN
Trigger: GTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTT...AGCATCTCGCTTTATCCACCATAACGTAAAGAACTGCGGTGTGATAACAGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp GTGCTGCCCTCAGGATGTGTAGCTGCAGTAGATGGATGCAATACTGGCGTGGTGTGGCTGCCCCATAGCTaGAATTCCTTTATTAACAAG +
Preference number: 3 (lower is better)
Translates to: VLPSGCVAAVDGCNTGVVWLPHS*NSFINK
Trigger: CTTGTTAATAAAGGAATTCAAGCTATGGGGCAGCCA...CACCACGCCAGTATTGCATCCATCTACTGCAGCTACACATCCTGAGGGCAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR TCA 72 bp GGGGTCACAAACTGTGAAACCTCTACCCAGAGGTCCTaGACATGTATAGGAAAATCCTGGCACAACTGCGAG +
Preference number: 3 (lower is better)
Translates to: GVTNCETSTQRS*TCIGKSWHNCE
Trigger: CTCGCAGTTGTGCCAGGATTTTCCTATACATGTTCAGGACCTCTGGGTAGAGGTTTCACAGTTTGTGACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR GCA 72 bp TGGATAAAGCGAGATGCTAACACTCCTGCCTTTCAGTaGTGGGAGCTTTCTACATGGTTTACGGGCACTGCA +
Preference number: 3 (lower is better)
Translates to: WIKRDANTPAFQ*WELSTWFTGTA
Trigger: TGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCGCTTTATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR GCA 72 bp GCCACGTTTATTACTGAACTCCTAGCCAGCCTCCAGTaGCCAAGAACGGTCAAGAAGATTCCTTGCTGTTCA +
Preference number: 3 (lower is better)
Translates to: ATFITELLASLQ*PRTVKKIPCCS
Trigger: TGAACAGCAAGGAATCTTCTTGACCGTTCTTGGGCACTGGAGGCTGGCTAGGAGTTCAGTAATAAACGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR GCA 72 bp TGTTACCAAAAGGAACTCAAGCTACAAGGGGGCAGGTaGTCCTCAGCTCCTCCACTAAAGTGCAACACTTCT +
Preference number: 3 (lower is better)
Translates to: CYQKELKLQGGR*SSAPPLKCNTS
Trigger: AGAAGTGTTGCACTTTAGTGGAGGAGCTGAGGAGCACCTGCCCCCTTGTAGCTTGAGTTCCTTTTGGTAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CCA 72 bp GCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTaGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGA +
Preference number: 3 (lower is better)
Translates to: ASSQPVELQVHS*FHSHVRGQEVR
Trigger: TCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
3UTR CCA 72 bp AGCTCACACTGGGCTTCTTCAGTTACAAAACCCCGTTaGGATCACACCCACTCTTCTTCGTGCCCTCTTTAT +
Preference number: 3 (lower is better)
Translates to: SSHWASSVTKPR*DHTHSSSCPLY
Trigger: ATAAAGAGGGCACGAAGAAGAGTGGGTGTGATCCCAACGGGGTTTTGTAACTGAAGAAGCCCAGTGTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp ATAAAGCGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGCATCCTCTCAGCCTGTaGAACTCCAAGTCCATTCCT +
Preference number: 3 (lower is better)
Translates to: IKRDANTPAFQCWELSTWHPLSL*NSKSIP
Trigger: AGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG...CCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCGCTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp CTAACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGATGAAGACTCAGACCTaGGGAGAACGAGTGCTCCCA +
Preference number: 3 (lower is better)
Translates to: LTPQYDNVNSLKQERLVEMKTQT*GERVLP
Trigger: TGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCAT...CTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
3UTR-3UTR CAA 90 bp TGCTATTTACTGCTTCAACTCCAGCAGGTATGTCTCACAGAATCCACTACATCTAAGGCAGGCAGCCTCTaGGAGGTGTTCAGGGGAAAC +
Preference number: 3 (lower is better)
Translates to: CYLLLQLQQVCLTESTTSKAGSL*EVFRGN
Trigger: GTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTT...AGATGTAGTGGATTCTGTGAGACATACCTGCTGGAGTTGAAGCAGTAAATAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp TTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACTCTGAAAGCTACCCCGTGCCAGACCACTaGTTTAGGCATGGCCTCGCC +
Preference number: 3 (lower is better)
Translates to: LVKCWFNDLDSMRHSESYPVPDH*FRHGLA
Trigger: GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGG...GTAGCTTTCAGAGTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR CCA 72 bp ATAAAGCGAGATGCTAACACTCCTGCCTTTCAGTGCTaGGAGCTTTCTACATGGTTTACGGGCACTGCAATG +
Preference number: 3 (lower is better)
Translates to: IKRDANTPAFQC*ELSTWFTGTAM
Trigger: CATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCGCTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp AAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATCGGTCATGGCAGAGGGTaGTCAGGTGTCCAATGTACA +
Preference number: 3 (lower is better)
Translates to: KAPIVILEHSALWSIGGIGHGRG*SGVQCT
Trigger: TGTACATTGGACACCTGACAACCCTCTGCCATGACC...GATGCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000588412.5
3UTR-3UTR CAA 90 bp AGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTCATCCTCTCAGCCTGTaGAACTCCAAGTCCATTCCT +
Preference number: 3 (lower is better)
Translates to: RYVSQNPLHLSLTEKWPFHPLSL*NSKSIP
Trigger: AGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG...AAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp TCCAGCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGTCAAGGATGGATGACTaGCACACAGTAGGCATTTCA +
Preference number: 3 (lower is better)
Translates to: SSRYVSQNPLHLSLTEKWSRMDD*HTVGIS
Trigger: TGAAATGCCTACTGTGTGCAAGTCATCCATCCTTGA...CCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp CAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTAACACTCCTGCCTTTCAGTCCTGCAGTTCTGCATaGTCCCGTTCACCTTTCTCT +
Preference number: 3 (lower is better)
Translates to: QFFTLWWIKRDANTPAFQSCSSA*SRSPFS
Trigger: AGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGA...CTGAAAGGCAGGAGTGTTAGCATCTCGCTTTATCCACCATAACGTAAAGAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355446.9
ENST00000440394.7
3UTR-3UTR CAA 90 bp CCTAGTGTGATGGGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACCGTAGTTCTCTTTTCTaGGCTCCTGGGTTGACTACC +
Preference number: 3 (lower is better)
Translates to: PSVMGVGHLVKCWFNDLDRSSLF*APGLTT
Trigger: GGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACG...GTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCCCATCACACTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp TTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTCATCCTCTCAGCCTGTaGAACTCCAAGTCCATTCCT +
Preference number: 3 (lower is better)
Translates to: FQCWELSTWFTGTAMNRIHPLSL*NSKSIP
Trigger: AGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG...AATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp TCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCTTTCTGATGAAGACTCAGACCTaGGGAGAACGAGTGCTCCCA +
Preference number: 3 (lower is better)
Translates to: SLTMPIPSLICSLGVSFLMKTQT*GERVLP
Trigger: TGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCAT...CAGAAAGCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp GTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGACTCTACAGACTTTAAATTCTATGCCAATACCTTCATaGATTTGCAGTCTTGGGGTC +
Preference number: 3 (lower is better)
Translates to: VGSSWTDGAVLTLQTLNSMPIPS*ICSLGV
Trigger: GACCCCAAGACTGCAAATCAATGAAGGTATTGGCAT...AGAATTTAAAGTCTGTAGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp CTTGGGGTCAGCTTTCTGATTTGCAACATGAAGCTGGCTGAATTCCACGAGGTAATGCCAATACCTTCATaGATTTGCAGTCTTGGGGTC +
Preference number: 3 (lower is better)
Translates to: LGVSFLICNMKLAEFHEVMPIPS*ICSLGV
Trigger: GACCCCAAGACTGCAAATCAATGAAGGTATTGGCAT...TACCTCGTGGAATTCAGCCAGCTTCATGTTGCAAATCAGAAAGCTGACCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR TCA 72 bp GTATGTCTCACAGAATCCACTACATCTCTCCCTCACTaGGAAGTGGCCTTTTCAAGGATGGATGACTTGCAC +
Preference number: 3 (lower is better)
Translates to: VCLTESTTSLPH*EVAFSRMDDLH
Trigger: GTGCAAGTCATCCATCCTTGAAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR GCA 72 bp ATGAGACACTCTGAAAGCTACAAACTGCATCCACTCTaGCCTACAGCACGAAGGCCACGTTTATTACTGAAC +
Preference number: 3 (lower is better)
Translates to: MRHSESYKLHPL*PTARRPRLLLN
Trigger: GTTCAGTAATAAACGTGGCCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGAGTGTCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR GCA 72 bp TTCTGGGAGGAACAGGACTCTGGCAGCAAATCCAAATaGCAGTGGATGGGCGGCTCAGAAACATTTATATTT +
Preference number: 3 (lower is better)
Translates to: FWEEQDSGSKSK*QWMGGSETFIF
Trigger: AAATATAAATGTTTCTGAGCCGCCCATCCACTGGCATTTGGATTTGCTGCCAGAGTCCTGTTCCTCCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CCA 72 bp AACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATaGTTTACGGGCACTGCAATGAACAGAATTGAGGTA +
Preference number: 3 (lower is better)
Translates to: NTPAFQCWELST*FTGTAMNRIEV
Trigger: TACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR CCA 72 bp AACAGGACTCTGGCAGCAAATCCAAATGCCAGTGGATaGGCGGCTCAGAAACATTTATATTTTGGGGTGACA +
Preference number: 3 (lower is better)
Translates to: NRTLAANPNASG*AAQKHLYFGVT
Trigger: TGTCACCCCAAAATATAAATGTTTCTGAGCCGCCCATCCACTGGCATTTGGATTTGCTGCCAGAGTCCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp AGGAAGCATCTCAGTAAGAGGTTTATGAGCAGAGTCCATTTAACCTTCGATAAGGGTCATGGCAGAGGGTaGTCAGGTGTCCAATGTACA +
Preference number: 3 (lower is better)
Translates to: RKHLSKRFMSRVHLTFDKGHGRG*SGVQCT
Trigger: TGTACATTGGACACCTGACAACCCTCTGCCATGACC...CTTATCGAAGGTTAAATGGACTCTGCTCATAAACCTCTTACTGAGATGCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440394.7
3UTR-3UTR CAA 90 bp GCTACGTCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCATGCCAATACCTTCATaGATTTGCAGTCTTGGGGTC +
Preference number: 3 (lower is better)
Translates to: ATSLTMPIPSLICSLGVSMPIPS*ICSLGV
Trigger: GACCCCAAGACTGCAAATCAATGAAGGTATTGGCAT...GCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGACGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR TCA 72 bp AAGAAGATTCCTTGCTGTTCACAGAGACCAGACAGATaGTATCGGTCCCGGAAATGCTTCTTCTCAGAAGCA +
Preference number: 3 (lower is better)
Translates to: KKIPCCSQRPDR*YRSRKCFFSEA
Trigger: TGCTTCTGAGAAGAAGCATTTCCGGGACCGATATCATCTGTCTGGTCTCTGTGAACAGCAAGGAATCTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR CCA 72 bp ATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTaGAGAACACCTCACACCATCTTCTTGTTAACTGGC +
Preference number: 3 (lower is better)
Translates to: MITSTVSNRRDW*RTPHTIFLLTG
Trigger: GCCAGTTAACAAGAAGATGGTGTGAGGTGTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
3UTR CCA 72 bp AAGGCTGTTATCACACCGCAGTTCTTTACGTTATGGTaGATAAAGCGAGATGCTAACACTCCTGCCTTTCAG +
Preference number: 3 (lower is better)
Translates to: KAVITPQFFTLW*IKRDANTPAFQ
Trigger: CTGAAAGGCAGGAGTGTTAGCATCTCGCTTTATCCACCATAACGTAAAGAACTGCGGTGTGATAACAGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR CCA 72 bp GTGAAGGCTGTTATCACACCGCAGTTCTTTACGTTATaGTGGATAAAGCGAGATGCTAACACTCCTGCCTTT +
Preference number: 3 (lower is better)
Translates to: VKAVITPQFFTL*WIKRDANTPAF
Trigger: AAAGGCAGGAGTGTTAGCATCTCGCTTTATCCACCATAACGTAAAGAACTGCGGTGTGATAACAGCCTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp ATGACTGCTGTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATTGATTCGTAGTTCTCTTTTCTaGGCTCCTGGGTTGACTACC +
Preference number: 3 (lower is better)
Translates to: MTAVVYATSLTMPIPSLIRSSLF*APGLTT
Trigger: GGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACG...AATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAACAGCAGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTCGTAGTTCTCTTTTCTaGGCTCCTGGGTTGACTACC +
Preference number: 3 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFRSSLF*APGLTT
Trigger: GGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACG...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
3UTR-3UTR CAA 90 bp GGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACGGTCAAGAAGATTCCTaGCTGTTCACAGAGACCAGA +
Preference number: 3 (lower is better)
Translates to: GVGHLVKCWFNDLDSMRHGQEDS*LFTETR
Trigger: TCTGGTCTCTGTGAACAGCAAGGAATCTTCTTGACC...GTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp GCAGTTGTATGCCCATATGAAACCATGACCACTAGGAGAGGGGCATGGAATGACCCTTGCAAATCTCAATaGAGATACCTCATCAATGAT +
Preference number: 3 (lower is better)
Translates to: AVVCPYETMTTRRGAWNDPCKSQ*RYLIND
Trigger: ATCATTGATGAGGTATCTCAATTGAGATTTGCAAGG...GTCATTCCATGCCCCTCTCCTAGTGGTCATGGTTTCATATGGGCATACAACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR TCA 72 bp GATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTaGGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTGC +
Preference number: 3 (lower is better)
Translates to: DVETVLESHFFK*ASWDEVCSVWC
Trigger: GCACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
3UTR TCA 72 bp TTCCTCATGGAAAACCAGACTTCAATGGACAGAAATTaGGGGGCAAGTCACAATGCCCTTCTTGACACTGAA +
Preference number: 3 (lower is better)
Translates to: FLMENQTSMDRN*GASHNALLDTE
Trigger: TTCAGTGTCAAGAAGGGCATTGTGACTTGCCCCTCAATTTCTGTCCATTGAAGTCTGGTTTTCCATGAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR GCA 72 bp GCTACGTCCTTAACAATGCCAATACCTTCATTGATTTaGAGTCTTGGGGTCAGCTTTCTGATTTGCAACATG +
Preference number: 3 (lower is better)
Translates to: ATSLTMPIPSLI*SLGVSFLICNM
Trigger: CATGTTGCAAATCAGAAAGCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGACGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR CCA 72 bp AGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTaGTGGAGAACACCTCACACCATCTTCTTGTTAACT +
Preference number: 3 (lower is better)
Translates to: SMITSTVSNRRD*WRTPHTIFLLT
Trigger: AGTTAACAAGAAGATGGTGTGAGGTGTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
3UTR CCA 72 bp CTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTaGGGTCAGCTTTCTGATTTGCAACATGAAGCTGGC +
Preference number: 3 (lower is better)
Translates to: LNNANTFIDLQS*GQLSDLQHEAG
Trigger: GCCAGCTTCATGTTGCAAATCAGAAAGCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR CCA 72 bp CCTAGTGTGATGGGAGTGGGACATTTGGTTAAGTGTTaGTTCAATGATCTAGACTCAATGAGACACTCTGAA +
Preference number: 3 (lower is better)
Translates to: PSVMGVGHLVKC*FNDLDSMRHSE
Trigger: TTCAGAGTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCCCATCACACTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR-3UTR CAA 90 bp ATGACTGCTGTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATTGATTAATACCTTCATTGATTaGCAGTCTTGGGGTCAGCTT +
Preference number: 3 (lower is better)
Translates to: MTAVVYATSLTMPIPSLINTFID*QSWGQL
Trigger: AAGCTGACCCCAAGACTGCAAATCAATGAAGGTATT...AATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAACAGCAGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR TCA 72 bp CAGTCTGCTTTACAAGTTATTTCTAAAACCCAAGTGTaGGGAAGTCTGAGAGCCACAGGTAGATCTTTAGAT +
Preference number: 3 (lower is better)
Translates to: QSALQVISKTQV*GSLRATGRSLD
Trigger: ATCTAAAGATCTACCTGTGGCTCTCAGACTTCCTCACACTTGGGTTTTAGAAATAACTTGTAAAGCAGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR TCA 72 bp AAGTCCTTGCAAATCTCAATTGAGATACCTCATCAATaGTTCAATGAGTACCGGGGGTTAGAGGTATATGAA +
Preference number: 3 (lower is better)
Translates to: KSLQISIEIPHQ*FNEYRGLEVYE
Trigger: TTCATATACCTCTAACCCCCGGTACTCATTGAATCATTGATGAGGTATCTCAATTGAGATTTGCAAGGACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR GCA 72 bp AGATTTGGGTTAAGTTCCTGCCTAATTATTTATGACTaGTGTTGTCTACGCTACGTCCTTAACAATGCCAAT +
Preference number: 3 (lower is better)
Translates to: RFGLSSCLIIYD*CCLRYVLNNAN
Trigger: ATTGGCATTGTTAAGGACGTAGCGTAGACAACAGCAGTCATAAATAATTAGGCAGGAACTTAACCCAAATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCACTGGGCTGCAGGAGCTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTCGCTACTGCTGCTGCTaGCGCCCAGGCACCGCCGCC +
Preference number: 4 (lower is better)
Translates to: PLGCRSSGHGCWQGRQPLRYCCC*RPGTAA
Trigger: GGCGGCGGTGCCTGGGCGGCAGCAGCAGCAGTAGCG...AAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGCCCAGTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000360905.9
ENST00000440394.7
ENST00000543086.7
CDS-3UTR GCA 90 bp GCTGGTGGAGTGAGTCCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGGCTGCCGCTACTGCTaGTGCTGCCGCCCAGGCACC +
Preference number: 4 (lower is better)
Translates to: AGGVSPRRIRGSRSWQRVGCRYC*CCRPGT
Trigger: GGTGCCTGGGCGGCAGCAGCAGCAGTAGCGGCAGCC...AACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGGACTCACTCCACCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
CDS-3UTR GCA 90 bp CCACTGGGCTGCAGGAGCTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTAGCTCAGGACACGGGTaGTGGCAAGGCAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PLGCRSSGHGCWQGRQPLSSGHG*WQGRQP
Trigger: AGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCT...AAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGCCCAGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCCGGGCGGCCTCACTCTaGAGAGGGTGCCTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSRAASL*RGCLLH
Trigger: ATGCAGCAGGCACCCTCTGCAGAGTGAGGCCGCCCG...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCGGCAGCGGGTGCACGTaGATCCCAGACACCACCATG +
Preference number: 4 (lower is better)
Translates to: ESSWPVPVPDHLFRHGLAGSGCT*IPDTTM
Trigger: CATGGTGGTGTCTGGGATGCACGTGCACCCGCTGCC...GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCCCTCGCCTGCTGTCTTaGTTCCACCGTGGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSPRLLS*FHRGPV
Trigger: CACGGGGCCACGGTGGAACCAAGACAGCAGGCGAGG...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCTGCCCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCTCGCCTGCTGTCTTaGTTCCACCGTGGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: AAPGSSSAAHSPKPPGHRPRLLS*FHRGPV
Trigger: CACGGGGCCACGGTGGAACCAAGACAGCAGGCGAGG...ACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCGGGGGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440394.7
CDS-3UTR CCA 90 bp CCACTGGGCTGCAGGAGCTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTCTCTCACTCTGGGGGTaGGTGAGCCCGCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: PLGCRSSGHGCWQGRQPLLSLWG*VSPQVP
Trigger: AGGAACTTGCGGGCTCACCCACCCCCAGAGTGAGAG...AAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGCCCAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGACGTGGAAGCCTGGGTaGACGCCCAGGGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: ARQAASWRCSGETSPRATTWKPG*TPRALA
Trigger: AGCCAGAGCCCTGGGCGTTCACCCAGGCTTCCACGT...CGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCACTGGGCTGCAGGAGCTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTTCTTGGCTCCTGGGTTaGCTACCTCAGGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: PLGCRSSGHGCWQGRQPLSWLLG*LPQASP
Trigger: TGGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGA...AAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGCCCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAAGACACACCCAGTGGCTaGGAGTGGCAGGCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: SGHGCWQGRQPLGGVQGKDTPSG*EWQALH
Trigger: GTGCAGCGCCTGCCACTCTCAGCCACTGGGTGTGTC...TTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGGACACACCCAGTGGCTaGGAGTGGCAGGCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: ARQAASWRCSGETSPRATDTPSG*EWQALH
Trigger: GTGCAGCGCCTGCCACTCTCAGCCACTGGGTGTGTC...CGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGTGGCGTGGTGTGGAATaGGGGGCTGGACCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: ARQAASWRCSGETSPRATWRGVE*GAGPRG
Trigger: CCCTCTGGGTCCAGCCCCTCATTCCACACCACGCCA...CGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCGGGAACGTGGAAGCCTaGGTGAACGCCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSGNVEA*VNAQGS
Trigger: AGAGCCCTGGGCGTTCACCCAGGCTTCCACGTTCCC...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCACTGGGCTGCAGGAGCTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTAGGGGGTCTCGGTCATaGCAGAGGGTTGTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: PLGCRSSGHGCWQGRQPLRGSRS*QRVVRC
Trigger: ACACCTGACAACCCTCTGCCATGACCGAGACCCCCT...AAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGCCCAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCACCTCGCCTGCTGTCTTaGTTCCACCGTGGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: VRGQEVRGSSAPWLSVRAPRLLS*FHRGPV
Trigger: CACGGGGCCACGGTGGAACCAAGACAGCAGGCGAGG...TGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCCTTGGAGAGAGCAGCTaGCCAGTGCCCGTGCCAGAC +
Preference number: 4 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSLGESS*PVPVPD
Trigger: GTCTGGCACGGGCACTGGCCAGCTGCTCTCTCCAAG...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCACTGGGCTGCAGGAGCTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTGGGAGGAGGGGAGTGTaGCTGCCCCATAGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: PLGCRSSGHGCWQGRQPLGRRGV*LPHSLN
Trigger: ATTCAAGCTATGGGGCAGCCACACTCCCCTCCTCCC...AAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGCCCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTCAGAGGACAGGAGGTaGGAGGCTCCTCTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: ESSWPVPVPDHLFRHGLASEDRR*EAPLLH
Trigger: ATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGA...GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCACAACTGCGAGGCTCTaGGCCCCAGATTCTCGTTCC +
Preference number: 4 (lower is better)
Translates to: ESSWPVPVPDHLFRHGLATTARL*APDSRS
Trigger: GGAACGAGAATCTGGGGCTCAGAGCCTCGCAGTTGT...GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGTACAGCCCAGCCCGGGCCGTaGGCAAGAAGCTGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: GGSGGLGHGRGLSGVQCTAQPGP*ARSWVG
Trigger: TCCTACCCAGCTTCTTGCTCACGGCCCGGGCTGGGC...TGTACATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
CDS-3UTR GCA 90 bp TCTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGCGCTACTGCTGCTGCTaGCGCCCAGGCACCGCCGCC +
Preference number: 4 (lower is better)
Translates to: SGPLEASSQPVELQVHSWRYCCC*RPGTAA
Trigger: GGCGGCGGTGCCTGGGCGGCAGCAGCAGCAGTAGCG...CCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000360905.9
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
CDS-3UTR GCA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAGCCATCGTGAGGCCTaGTCACAGCTCCCCGGTACA +
Preference number: 4 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSSHREA*SQLPGT
Trigger: TGTACCGGGGAGCTGTGAGCAGGCCTCACGATGGCT...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAAAGCTCAGGACACGGGTaGTGGCAAGGCAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SGHGCWQGRQPLGGVQGKSSGHG*WQGRQP
Trigger: AGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCT...TTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGCCGCTGGCCAGTGCCCGTaGCAGACCACTTGTTTAGGC +
Preference number: 4 (lower is better)
Translates to: RTGGERLLCSMALCQGRAAGQCP*QTTCLG
Trigger: GCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGC...GGCTCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GGAGAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCCCCCACTGGATATCCTaGAATGCCCGGCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: GESSWPVPVPDHLFRHGLPHWIS*NARQVP
Trigger: AGGCACCTGCCGGGCATTGCAGGATATCCAGTGGGG...GAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGGGAACGTGGAAGCCTaGGTGAACGCCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: VRGQEVRGSSAPWLSVRAGNVEA*VNAQGS
Trigger: AGAGCCCTGGGCGTTCACCCAGGCTTCCACGTTCCC...TGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp GAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCGGGACAGTCAAGGGCTaGTGGTGGGAAGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: ESSWPVPVPDHLFRHGLAGTVKG*WWEVPG
Trigger: TCCAGGAACTTCCCACCACCAGCCCTTGACTGTCCC...GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGACTTGGAGAGAGCAGCTaGCCAGTGCCCGTGCCAGAC +
Preference number: 4 (lower is better)
Translates to: QRTGGERLLCSMALCQGRLGESS*PVPVPD
Trigger: GTCTGGCACGGGCACTGGCCAGCTGCTCTCTCCAAG...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCCCTCTTCTCTCACTCTaGGGGTGGGTGAGCCCGCAA +
Preference number: 4 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSPLLSL*GWVSPQ
Trigger: TTGCGGGCTCACCCACCCCCAGAGTGAGAGAAGAGG...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCACTGGGCTGCAGGAGCTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTAGTGCTCACCCGTGCTaGGTGGTCACTGGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: PLGCRSSGHGCWQGRQPLSAHPC*VVTGRD
Trigger: ATCTCTTCCAGTGACCACCCAGCACGGGTGAGCACT...AAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGCCCAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CAA 72 bp GCTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTaGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAAC +
Preference number: 4 (lower is better)
Translates to: AQDTGAGKAGSL*EVFRGNQPKSN
Trigger: GTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR CAA 72 bp GGAGAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTaGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: GESSWPVPVPDH*FRHGLACCLGS
Trigger: GGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGACTGTTGGTTCGACGGTaGCCCAAGCGAGGGGAACGT +
Preference number: 4 (lower is better)
Translates to: QRTGGERLLCSMALCQGRLLVRR*PKRGER
Trigger: ACGTTCCCCTCGCTTGGGTCACCGTCGAACCAACAG...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp CCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGCTGTTGGTTCGACGGTaGCCCAAGCGAGGGGAACGT +
Preference number: 4 (lower is better)
Translates to: PRVIFCSSFSQAAWSSSKLLVRR*PKRGER
Trigger: ACGTTCCCCTCGCTTGGGTCACCGTCGAACCAACAG...CTTGGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCGCTGAGAGCTGTCGTTaGGATTGTCCTCCCGTCGTC +
Preference number: 4 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSAESCR*DCPPVV
Trigger: GACGACGGGAGGACAATCTCAACGACAGCTCTCAGC...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TGGGACAGTCAAGGGCTGGTGGTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGCTAAGAGGGGCTGGATaGTCTGGTCTGGGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: WDSQGLVVGSSWTDGAVLLRGAG*SGLGRA
Trigger: AGCCCTCCCCAGACCAGATCATCCAGCCCCTCTTAG...CAGCACAGCCCCATCAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TGGGACAGTCAAGGGCTGGTGGTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGAGGAAGCTGGTGGAGTaGGTCCACGGAGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: WDSQGLVVGSSWTDGAVLRKLVE*VHGGSG
Trigger: CCCTGATCCTCCGTGGACTCACTCCACCAGCTTCCT...CAGCACAGCCCCATCAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGCCTCAGAGGACAGGAGGTaGGAGGCTCCTCTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: RTGGERLLCSMALCQGRASEDRR*EAPLLH
Trigger: ATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGA...GGCTCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp CAGGCGCTGCACCTGATGAGAAAGTCCACGTGGGTGGGATCTGGGCCACCTGCTGGGAAGTTCCTGGACTaGTGGGGCTGTGCTGACTCT +
Preference number: 4 (lower is better)
Translates to: QALHLMRKSTWVGSGPPAGKFLD*WGCADS
Trigger: AGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCC...AGCAGGTGGCCCAGATCCCACCCACGTGGACTTTCTCATCAGGTGCAGCGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGCCGGGAAGTTCCTGGACTaGTGGGGCTGTGCTGACTCT +
Preference number: 4 (lower is better)
Translates to: RTGGERLLCSMALCQGRAGKFLD*WGCADS
Trigger: AGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCC...GGCTCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCACTGGGCTGCAGGAGCTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTCAGAGACCAGACAGATaGTATCGGTCCCGGAAATGC +
Preference number: 4 (lower is better)
Translates to: PLGCRSSGHGCWQGRQPLQRPDR*YRSRKC
Trigger: GCATTTCCGGGACCGATATCATCTGTCTGGTCTCTG...AAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGCCCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCACTGGGCTGCAGGAGCTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTGGCCACGTTTATTACTaGACTCCTAGCCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PLGCRSSGHGCWQGRQPLGHVYY*TPSQPP
Trigger: TGGAGGCTGGCTAGGAGTTCAGTAATAAACGTGGCC...AAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGCCCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCCGCTACTGCTGCTGCTaGCGCCCAGGCACCGCCGCC +
Preference number: 4 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFRYCCC*RPGTAA
Trigger: GGCGGCGGTGCCTGGGCGGCAGCAGCAGCAGTAGCG...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000360905.9
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
CDS-3UTR GCA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTGGCTGCCGCTACTGCTaGTGCTGCCGCCCAGGCACC +
Preference number: 4 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTGCRYC*CCRPGT
Trigger: GGTGCCTGGGCGGCAGCAGCAGCAGTAGCGGCAGCC...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000360905.9
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
CDS-3UTR GCA 90 bp CCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTGCTGGCCAGTGCCCGTaGCAGACCACTTGTTTAGGC +
Preference number: 4 (lower is better)
Translates to: PVPVPDHLFRHGLACCLGAGQCP*QTTCLG
Trigger: GCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGC...ACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGGCTGGCCAGTGCCCGTaGCAGACCACTTGTTTAGGC +
Preference number: 4 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPAGQCP*QTTCLG
Trigger: GCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGC...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCCCTAAGTGTGCTCCATaGTTCCTAAGCCGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSPKCAP*FLSRQP
Trigger: GGGCTGGCGGCTTAGGAAGCATGGAGCACACTTAGG...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTGGACCCAGAGGGCCTaGTTTGGCCGGGGTGAATTC +
Preference number: 4 (lower is better)
Translates to: PVPVPDHLFRHGLACCLGWTQRA*FGRGEF
Trigger: GAATTCACCCCGGCCAAAGCAGGCCCTCTGGGTCCA...ACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCACTGGGCTGCAGGAGCTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTGCTGCAGTAGATGGATaGAATACTGGCGTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: PLGCRSSGHGCWQGRQPLAAVDG*NTGVVW
Trigger: CCACACCACGCCAGTATTGCATCCATCTACTGCAGC...AAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGCCCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCACTGGGCTGCAGGAGCTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTCACTCATCTCTGGACTaGCTCTGGCTTCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: PLGCRSSGHGCWQGRQPLHSSLD*LWLPML
Trigger: CAGCATTGGAAGCCAGAGCCAGTCCAGAGATGAGTG...AAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGCCCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGCCAGGGGGTCTCGGTCATaGCAGAGGGTTGTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: RTGGERLLCSMALCQGRARGSRS*QRVVRC
Trigger: ACACCTGACAACCCTCTGCCATGACCGAGACCCCCT...GGCTCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp GCTGGTGGAGTGAGTCCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTAGGGGGTCTCGGTCATaGCAGAGGGTTGTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: AGGVSPRRIRGSRSWQRVRGSRS*QRVVRC
Trigger: ACACCTGACAACCCTCTGCCATGACCGAGACCCCCT...AACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGGACTCACTCCACCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CCACTGGGCTGCAGGAGCTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTGAACACTCAGCTCTCTaGTCCATTGGAGGCATCCTC +
Preference number: 4 (lower is better)
Translates to: PLGCRSSGHGCWQGRQPLEHSAL*SIGGIL
Trigger: GAGGATGCCTCCAATGGACCAGAGAGCTGAGTGTTC...AAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGCCCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGCCAGGCAGGCAGCCTCTTaGAGGTGTTCAGGGGAAACC +
Preference number: 4 (lower is better)
Translates to: RTGGERLLCSMALCQGRARQAAS*RCSGET
Trigger: GGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCT...GGCTCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCCCTCGCCTGCTGTCTTaGTTCCACCGTGGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFPRLLS*FHRGPV
Trigger: CACGGGGCCACGGTGGAACCAAGACAGCAGGCGAGG...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCACACGTGGGTGGGATCTaGGCCACCTGCTTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: VRGQEVRGSSAPWLSVRAHVGGI*ATCLER
Trigger: TCTCTCCAAGCAGGTGGCCCAGATCCCACCCACGTG...TGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTTTCCTCTCACAGGGAGAGGGATTGTTTCACAGCAGGGAGTAGGGGGAGCTGGGGGCTAGTCCTGCGATaGGCCAGCAGGCCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: VSSHRERDCFTAGSRGSWGLVLR*ASRPEW
Trigger: CCACTCTGGCCTGCTGGCCCATCGCAGGACTAGCCC...CCAGCTCCCCCTACTCCCTGCTGTGAAACAATCCCTCTCCCTGTGAGAGGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CAA 72 bp GCGACAGACAGGCAGGGCTGGATGAAGACTCAGACCTaGGGAGAACGAGTGCTCCCAAGCCATCGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: ATDRQGWMKTQT*GERVLPSHREA
Trigger: GGCCTCACGATGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTGTCTGTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp CTAACTCATCCTGAAGCTGCCCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGACGTGGAAGCCTGGGTaGACGCCCAGGGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LTHPEAAPGSSSAAHSPKTWKPG*TPRALA
Trigger: AGCCAGAGCCCTGGGCGTTCACCCAGGCTTCCACGT...CTTGGGAGAATGAGCTGCAGAAGATGACCCGGGGGCAGCTTCAGGATGAGTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp AAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGACGTGGAAGCCTGGGTaGACGCCCAGGGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: KQGQEDSSRALTTCSRMSTWKPG*TPRALA
Trigger: AGCCAGAGCCCTGGGCGTTCACCCAGGCTTCCACGT...CGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp CAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCACTGTTGGTTCGACGGTaGCCCAAGCGAGGGGAACGT +
Preference number: 4 (lower is better)
Translates to: QAGLDEDSDLGRTSAPKPLLVRR*PKRGER
Trigger: ACGTTCCCCTCGCTTGGGTCACCGTCGAACCAACAG...TGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCCAGCCTGCAAGGATTTaGCCCGTTCTTTCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: ESSWPVPVPDHLFRHGLAQPARI*PVLSSC
Trigger: GCAGCTTGAAAGAACGGGTCAAATCCTTGCAGGCTG...GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGGCTGAGAGCTGTCGTTaGGATTGTCCTCCCGTCGTC +
Preference number: 4 (lower is better)
Translates to: ARQAASWRCSGETSPRATAESCR*DCPPVV
Trigger: GACGACGGGAGGACAATCTCAACGACAGCTCTCAGC...CGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGTCTTGGCTCCTGGGTTaGCTACCTCAGGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: ARQAASWRCSGETSPRATSWLLG*LPQASP
Trigger: TGGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGA...CGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCGCTCCCAAGCCATCGTaGGGCCTGCTCACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SFSCQRTGGERLLCSMALAPKPS*GLLTAP
Trigger: GGGAGCTGTGAGCAGGCCTCACGATGGCTTGGGAGC...GAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp CAGGCGCTGCACCTGATGAGAAAGTCCACGTGGGTGGGATCTGGGCCACCTGCTAGGCAAGCGGGTGACTaGGACCCCCAAACTCATGAA +
Preference number: 4 (lower is better)
Translates to: QALHLMRKSTWVGSGPPARQAGD*DPQTHE
Trigger: TTCATGAGTTTGGGGGTCTCAGTCACCCGCTTGCCT...AGCAGGTGGCCCAGATCCCACCCACGTGGACTTTCTCATCAGGTGCAGCGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGACTACAGGCAAGCGGGTaGCTGAGACCCCCAAACTCA +
Preference number: 4 (lower is better)
Translates to: QRTGGERLLCSMALCQGRLQASG*LRPPNS
Trigger: TGAGTTTGGGGGTCTCAGTCACCCGCTTGCCTGTAG...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGCTACAGGCAAGCGGGTaGCTGAGACCCCCAAACTCA +
Preference number: 4 (lower is better)
Translates to: ARQAASWRCSGETSPRATLQASG*LRPPNS
Trigger: TGAGTTTGGGGGTCTCAGTCACCCGCTTGCCTGTAG...CGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGTACCTGGCCTCGAACTCCTaGTCTCAGGTGATCCGCCTG +
Preference number: 4 (lower is better)
Translates to: RRIRGSRSWQRVVRCPMYLASNS*SQVIRL
Trigger: CAGGCGGATCACCTGAGATCAGGAGTTCGAGGCCAG...GTACATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440394.7
CDS-3UTR TCA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCAGCCCAGCCCGGGCCGTaGGCAAGAAGCTGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPAQPGP*ARSWVG
Trigger: TCCTACCCAGCTTCTTGCTCACGGCCCGGGCTGGGC...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000546231.6
CDS-3UTR GCA 90 bp CCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACGGCTGCCGCTACTGCTaGTGCTGCCGCCCAGGCACC +
Preference number: 4 (lower is better)
Translates to: PAFQCWELSTWFTGTAMNGCRYC*CCRPGT
Trigger: GGTGCCTGGGCGGCAGCAGCAGCAGTAGCGGCAGCC...GTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360905.9
ENST00000440394.7
ENST00000543086.7
CDS-3UTR GCA 90 bp GGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCAGGGCTGCCGCTACTaGTGCTGCTGCCGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GPLEASSQPVELQVHSWFQGCRY*CCCRPG
Trigger: GCCTGGGCGGCAGCAGCAGCAGTAGCGGCAGCCCTG...AAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000360905.9
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
CDS-3UTR GCA 90 bp CAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATGCCACCTCCAACACTaGTTCCCGAACTCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: QAGLDEDSDLGRTSAPKPCHLQH*FPNSLP
Trigger: CGGGAGGGAGTTCGGGAAGCAGTGTTGGAGGTGGCA...TGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCACTGGGCTGCAGGAGCTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTGTTCGCCAGTCCTGCTaGTACTATCCTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: PLGCRSSGHGCWQGRQPLVRQSC*YYPAET
Trigger: TGTTTCAGCAGGATAGTAGCAGCAGGACTGGCGAAC...AAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGCCCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTCCTTGGGAGAACGAGTaGTCCCAAGCCATCGTGAGG +
Preference number: 4 (lower is better)
Translates to: PVPVPDHLFRHGLACCLGPWENE*SQAIVR
Trigger: CCTCACGATGGCTTGGGAGCACTCGTTCTCCCAAGG...ACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAATTACTGGGGCAAAGCTaGAGGCGGGGACAACAGGGT +
Preference number: 4 (lower is better)
Translates to: SGHGCWQGRQPLGGVQGKLLGQS*RRGQQG
Trigger: ACCCTGTTGTCCCCGCCTGCAGCTTTGCCCCAGTAA...TTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTTACTGGGGCAAAGCTaGAGGCGGGGACAACAGGGT +
Preference number: 4 (lower is better)
Translates to: PVPVPDHLFRHGLACCLGLLGQS*RRGQQG
Trigger: ACCCTGTTGTCCCCGCCTGCAGCTTTGCCCCAGTAA...ACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GCGGCCTCACTCTGCAGAGGGTGCCTGCTGCATTGCAGTCTCTTCTCATCCTTCAGGCATGGCCTCGCCTaGTGTCTTGGTTCCACCGTG +
Preference number: 4 (lower is better)
Translates to: AASLCRGCLLHCSLFSSFRHGLA*CLGSTV
Trigger: CACGGTGGAACCAAGACAGCAGGCGAGGCCATGCCT...GAAGGATGAGAAGAGACTGCAATGCAGCAGGCACCCTCTGCAGAGTGAGGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCGGCAGCAAATCCAAATaGCAGTGGATGGGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSGSKSK*QWMGGS
Trigger: TGAGCCGCCCATCCACTGGCATTTGGATTTGCTGCC...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTGCCCAGGGCCACCTATaGCAGCCTGGGAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: LVHWRHPLSLLNSKSIPGAQGHL*QPGRRG
Trigger: TCCCCTCCTCCCAGGCTGGCATAGGTGGCCCTGGGC...ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATCGGCAGGTGTCTCTTaGCCAGGCAGGCACTACCCT +
Preference number: 4 (lower is better)
Translates to: QAGLDEDSDLGRTSAPKPSAGVS*PGRHYP
Trigger: AGGGTAGTGCCTGCCTGGGCAAGAGACACCTGCCGA...TGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CTTCCTCCTCAGTTCCGAACCCAGGCAGGTGAAGAGGAGGCCAGGAGCAGATGTTCGGCAGGTGTCTCTTaGCCAGGCAGGCACTACCCT +
Preference number: 4 (lower is better)
Translates to: LPPQFRTQAGEEEARSRCSAGVS*PGRHYP
Trigger: AGGGTAGTGCCTGCCTGGGCAAGAGACACCTGCCGA...ACATCTGCTCCTGGCCTCCTCTTCACCTGCCTGGGTTCGGAACTGAGGAGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATGGACCCAGAGGGCCTaGTTTGGCCGGGGTGAATTC +
Preference number: 4 (lower is better)
Translates to: QAGLDEDSDLGRTSAPKPWTQRA*FGRGEF
Trigger: GAATTCACCCCGGCCAAAGCAGGCCCTCTGGGTCCA...TGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CTTCCTCCTCAGTTCCGAACCCAGGCAGGTGAAGAGGAGGCCAGGAGCAGATGTTGGACCCAGAGGGCCTaGTTTGGCCGGGGTGAATTC +
Preference number: 4 (lower is better)
Translates to: LPPQFRTQAGEEEARSRCWTQRA*FGRGEF
Trigger: GAATTCACCCCGGCCAAAGCAGGCCCTCTGGGTCCA...ACATCTGCTCCTGGCCTCCTCTTCACCTGCCTGGGTTCGGAACTGAGGAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCACTGGATATCCTGCAATaGCCGGCAGGTGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: QAGLDEDSDLGRTSAPKPLDILQ*PAGAWA
Trigger: AGCCCAGGCACCTGCCGGGCATTGCAGGATATCCAG...TGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGGAACGCCCAGGGCTCTaGCTGCTCGGCTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: KQGQEDSSRALTTCSRMSERPGL*LLGSTF
Trigger: GAAGGTGGAGCCGAGCAGCCAGAGCCCTGGGCGTTC...CGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CCA 90 bp AGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATGGGAACGTGGAAGCCTaGGTGAACGCCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: RQGWMKTQTLGERVLPSHGNVEA*VNAQGS
Trigger: AGAGCCCTGGGCGTTCACCCAGGCTTCCACGTTCCC...ATGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGTACAGGGAACGTGGAAGCCTaGGTGAACGCCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: GGSGGLGHGRGLSGVQCTGNVEA*VNAQGS
Trigger: AGAGCCCTGGGCGTTCACCCAGGCTTCCACGTTCCC...TGTACATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CCACTGGGCTGCAGGAGCTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTGTTATAGGAAGCTGGTaGAGTGAGTCCACGGAGGAT +
Preference number: 4 (lower is better)
Translates to: PLGCRSSGHGCWQGRQPLVIGSW*SESTED
Trigger: ATCCTCCGTGGACTCACTCCACCAGCTTCCTATAAC...AAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGCCCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGCCAGCTCTCTGGTCCATTaGAGGCATCCTCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: RTGGERLLCSMALCQGRASSLVH*RHPLSL
Trigger: CAGGCTGAGAGGATGCCTCCAATGGACCAGAGAGCT...GGCTCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp CCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTAACTTCAGCAGCCACTaGGCTGCAGGAGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: PVPVPDHLFRHGLACCLGNFSSH*AAGAQD
Trigger: GTCCTGAGCTCCTGCAGCCCAGTGGCTGCTGAAGTT...ACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCACACGTGGGTGGGATCTaGGCCACCTGCTTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: QAGLDEDSDLGRTSAPKPHVGGI*ATCLER
Trigger: TCTCTCCAAGCAGGTGGCCCAGATCCCACCCACGTG...TGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGGAAAGTCCACGTGGGTaGGATCTGGGCCACCTGCTT +
Preference number: 4 (lower is better)
Translates to: ARQAASWRCSGETSPRATESPRG*DLGHLL
Trigger: AAGCAGGTGGCCCAGATCCCACCCACGTGGACTTTC...CGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAAAGAGAGGAGGTGGGATaGGACAAAAACCCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SGHGCWQGRQPLGGVQGKREEVG*DKNPLP
Trigger: GGGGAGCGGGTTTTTGTCCCATCCCACCTCCTCTCT...TTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGGGACAGTCAAGGGCTGGTGGTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGAGAGAGGAGGTGGGATaGGACAAAAACCCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: WDSQGLVVGSSWTDGAVLREEVG*DKNPLP
Trigger: GGGGAGCGGGTTTTTGTCCCATCCCACCTCCTCTCT...CAGCACAGCCCCATCAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTTGCCCGGCAGGTGCCTaGGCTAGTCCTGCGATGGGC +
Preference number: 4 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTCPAGA*ASPAMG
Trigger: GCCCATCGCAGGACTAGCCCAGGCACCTGCCGGGCA...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGAGTCACAGGCCCCACTaGATATCCTGCAATGCCCGG +
Preference number: 4 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPSHRPH*ISCNAR
Trigger: CCGGGCATTGCAGGATATCCAGTGGGGCCTGTGACT...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAACGTGGAAGCCTGGGTaGACGCCCAGGGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: RAPVPRSSLFLAPGLTTSTWKPG*TPRALA
Trigger: AGCCAGAGCCCTGGGCGTTCACCCAGGCTTCCACGT...TGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp TGCGACAGACAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCTGTTGGTTCGACGGTaGCCCAAGCGAGGGGAACGT +
Preference number: 4 (lower is better)
Translates to: CDRQAGLDEDSDLGRTSALLVRR*PKRGER
Trigger: ACGTTCCCCTCGCTTGGGTCACCGTCGAACCAACAG...AGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTGTCTGTCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCCTGTTGGTTCGACGGTaGCCCAAGCGAGGGGAACGT +
Preference number: 4 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFLLVRR*PKRGER
Trigger: ACGTTCCCCTCGCTTGGGTCACCGTCGAACCAACAG...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp GTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGGCTCCCAAGCCATCGTaGGGCCTGCTCACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: VGTMVCYLLKNGVGKLLQAPKPS*GLLTAP
Trigger: GGGAGCTGTGAGCAGGCCTCACGATGGCTTGGGAGC...CTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000588412.5
CDS-3UTR TCA 90 bp TGCGACAGACAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTGGCCGAGGAACAGAGTaGGGAAGGCTGCGACAGACA +
Preference number: 4 (lower is better)
Translates to: CDRQAGLDEDSDLGRTSAGRGTE*GRLRQT
Trigger: TGTCTGTCGCAGCCTTCCTCACTCTGTTCCTCGGCC...AGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTGTCTGTCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp GAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCACATCTCTCCCTCACTaGGAAGTGGCCTTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: ESSWPVPVPDHLFRHGLATSLPH*EVAFSR
Trigger: CCTTGAAAAGGCCACTTCTCAGTGAGGGAGAGATGT...GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGTGGCGTGGTGTGGAATaGGGGGCTGGACCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLWRGVE*GAGPRG
Trigger: CCCTCTGGGTCCAGCCCCTCATTCCACACCACGCCA...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CAGGCGCTGCACCTGATGAGAAAGTCCACGTGGGTGGGATCTGGGCCACCTGCTGCAACACTTCTCTTCTaGCGCATCAGGGAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: QALHLMRKSTWVGSGPPAATLLF*RIREQS
Trigger: TGACTGCTCCCTGATGCGTCAGAAGAGAAGTGTTGC...AGCAGGTGGCCCAGATCCCACCCACGTGGACTTTCTCATCAGGTGCAGCGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCGGCTGCCGCTACTGCTaGTGCTGCCGCCCAGGCACC +
Preference number: 4 (lower is better)
Translates to: VCYLLKNGVGKLLQFCIVGCRYC*CCRPGT
Trigger: GGTGCCTGGGCGGCAGCAGCAGCAGTAGCGGCAGCC...GACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
CDS-3UTR GCA 90 bp ATGAGACACTCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGCAGGGCTGCCGCTACTaGTGCTGCTGCCGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: MRHSESYKLHPLCPTARRQGCRY*CCCRPG
Trigger: GCCTGGGCGGCAGCAGCAGCAGTAGCGGCAGCCCTG...CCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGAGTGTCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360905.9
ENST00000440394.7
ENST00000543086.7
CDS-3UTR GCA 90 bp GCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTAACTCACAGGGCTGCCGCTACTaGTGCTGCTGCCGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: ALANSCSSALSRSPFSNSQGCRY*CCCRPG
Trigger: GCCTGGGCGGCAGCAGCAGCAGTAGCGGCAGCCCTG...TGAGTTAGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
CDS-3UTR GCA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCAGGGCTGCCGCTACTaGTGCTGCTGCCGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVQGCRY*CCCRPG
Trigger: GCCTGGGCGGCAGCAGCAGCAGTAGCGGCAGCCCTG...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000360905.9
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
CDS-3UTR GCA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCTGCCACCTCCAACACTaGTTCCCGAACTCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFCHLQH*FPNSLP
Trigger: CGGGAGGGAGTTCGGGAAGCAGTGTTGGAGGTGGCA...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp AGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGCCCTCCTCTGTCAGCTCTaGTACACAAGGTTCGCCAGT +
Preference number: 4 (lower is better)
Translates to: RTGGERLLCSMALCQGRALLCQL*YTRFAS
Trigger: ACTGGCGAACCTTGTGTAGCAGAGCTGACAGAGGAG...GGCTCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp GCTGGTGGAGTGAGTCCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTTGTCCGCTCTTTCTCTaGAAGGGCCTCCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: AGGVSPRRIRGSRSWQRVCPLFL*KGLLQS
Trigger: ACTTTGGAGGAGGCCCTTGCAGAGAAAGAGCGGACA...AACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGGACTCACTCCACCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp CCACTGGGCTGCAGGAGCTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTTCTGAAAGGTCGCCTTaGAACAGGCTGACTTTTTCC +
Preference number: 4 (lower is better)
Translates to: PLGCRSSGHGCWQGRQPLSERSP*NRLTFS
Trigger: GGAAAAAGTCAGCCTGTTGCAAGGCGACCTTTCAGA...AAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGCCCAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTTTTCTGCCAGAGACTaGTGGGTGGAGGACAGCTTT +
Preference number: 4 (lower is better)
Translates to: ESSWPVPVPDHLFRHGLAFSARD*WVEDSF
Trigger: AAAGCTGTCCTCCACCCAGCAGTCTCTGGCAGAAAA...GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCACTGGGCTGCAGGAGCTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTCGATTTTGCGTCTGCTaGTTAAGCTGCTGTACCAGA +
Preference number: 4 (lower is better)
Translates to: PLGCRSSGHGCWQGRQPLRFCVC*LSCCTR
Trigger: TCTGGTACAGCAGCTTAAGCAGCAGACGCAAAATCG...AAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGCCCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCAGCTCAGGACACGGGTaGTGGCAAGGCAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: VDYLRLPHKAGSRGLFQGSSGHG*WQGRQP
Trigger: AGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCT...GCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
CDS-3UTR GCA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGGCAGCAAATCCAAATaGCAGTGGATGGGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: QRTGGERLLCSMALCQGRGSKSK*QWMGGS
Trigger: TGAGCCGCCCATCCACTGGCATTTGGATTTGCTGCC...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTAAATCCTGGCACAACTaGGAGGCTCTGAGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: PVPVPDHLFRHGLACCLGKSWHN*EALSPR
Trigger: TCTGGGGCTCAGAGCCTCGCAGTTGTGCCAGGATTT...ACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGGAACGCCCAGGGCTCTaGCTGCTCGGCTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: SGPLEASSQPVELQVHSWERPGL*LLGSTF
Trigger: GAAGGTGGAGCCGAGCAGCCAGAGCCCTGGGCGTTC...CCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp GTGCACGTGCATCCCAGACACCACCATGGAGGCTGCTACTGTTACCAAAAGGAAGAACGCCCAGGGCTCTaGCTGCTCGGCTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: VHVHPRHHHGGCYCYQKEERPGL*LLGSTF
Trigger: GAAGGTGGAGCCGAGCAGCCAGAGCCCTGGGCGTTC...TTCCTTTTGGTAACAGTAGCAGCCTCCATGGTGGTGTCTGGGATGCACGTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAGTTCTAAGAGGGGCTaGATGATCTGGTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSSSKRG*MIWSGE
Trigger: CTCCCCAGACCAGATCATCCAGCCCCTCTTAGAACT...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCACTGGGCTGCAGGAGCTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTGAAGTTTGTAGTGTTTaGTGCCAAGAAGGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: PLGCRSSGHGCWQGRQPLEVCSV*CQEGSG
Trigger: CCCGGAACCTTCTTGGCACCAAACACTACAAACTTC...AAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGCCCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGAGCTCTCTGGTCCATTaGAGGCATCCTCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: ARQAASWRCSGETSPRATSSLVH*RHPLSL
Trigger: CAGGCTGAGAGGATGCCTCCAATGGACCAGAGAGCT...CGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCGGCCTCACTCTGCAGAGGGTGCCTGCTGCATTGCAGTCTCTTCTCATCCTTCAACTTCAGCAGCCACTaGGCTGCAGGAGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: AASLCRGCLLHCSLFSSFNFSSH*AAGAQD
Trigger: GTCCTGAGCTCCTGCAGCCCAGTGGCTGCTGAAGTT...GAAGGATGAGAAGAGACTGCAATGCAGCAGGCACCCTCTGCAGAGTGAGGCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTACAGTCAAGGGCTGGTaGTGGGAAGTTCCTGGACTG +
Preference number: 4 (lower is better)
Translates to: PVPVPDHLFRHGLACCLGTVKGW*WEVPGL
Trigger: CAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGT...ACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGACAGTCAAGGGCTGGTaGTGGGAAGTTCCTGGACTG +
Preference number: 4 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPTVKGW*WEVPGL
Trigger: CAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGT...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGGGACAGTCAAGGGCTGGTGGTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGCCTCTCTGGCCAGCCTaGCTATCAGGAAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: WDSQGLVVGSSWTDGAVLPLWPA*LSGSIS
Trigger: TGAGATGCTTCCTGATAGCCAGGCTGGCCAGAGAGG...CAGCACAGCCCCATCAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CTTCCTCCTCAGTTCCGAACCCAGGCAGGTGAAGAGGAGGCCAGGAGCAGATGTCCATCTTGGCCAGGCTaGCCTCGAACTCCTGATCTC +
Preference number: 4 (lower is better)
Translates to: LPPQFRTQAGEEEARSRCPSWPG*PRTPDL
Trigger: GAGATCAGGAGTTCGAGGCCAGCCTGGCCAAGATGG...ACATCTGCTCCTGGCCTCCTCTTCACCTGCCTGGGTTCGGAACTGAGGAGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CTTCCTCCTCAGTTCCGAACCCAGGCAGGTGAAGAGGAGGCCAGGAGCAGATGTTGTGGAATGAGGGGCTaGACCCAGAGGGCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LPPQFRTQAGEEEARSRCCGMRG*TQRACF
Trigger: AAAGCAGGCCCTCTGGGTCCAGCCCCTCATTCCACA...ACATCTGCTCCTGGCCTCCTCTTCACCTGCCTGGGTTCGGAACTGAGGAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTGCACGTGCATCCCAGACACCACCATGGAGGCTGCTACTGTTACCAAAAGGAAGGGCTAGTCCTGCGATaGGCCAGCAGGCCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: VHVHPRHHHGGCYCYQKEGLVLR*ASRPEW
Trigger: CCACTCTGGCCTGCTGGCCCATCGCAGGACTAGCCC...TTCCTTTTGGTAACAGTAGCAGCCTCCATGGTGGTGTCTGGGATGCACGTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGCCTCCCAGACACCACCATaGAGGCTGCTACTGTTACCA +
Preference number: 4 (lower is better)
Translates to: RTGGERLLCSMALCQGRASQTPP*RLLLLP
Trigger: TGGTAACAGTAGCAGCCTCCATGGTGGTGTCTGGGA...GGCTCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCCTCCTCATCCTGGTCTaGGGAGGGCTTGTGATTTGT +
Preference number: 4 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSLLILV*GGLVIC
Trigger: ACAAATCACAAGCCCTCCCCAGACCAGGATGAGGAG...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347735.10
ENST00000440394.7
CDS-3UTR TCA 90 bp CCACTGGGCTGCAGGAGCTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTAAAATGGGAACCTTGTaGGGTGTCTCTATGGCTACA +
Preference number: 4 (lower is better)
Translates to: PLGCRSSGHGCWQGRQPLKMGTL*GVSMAT
Trigger: TGTAGCCATAGAGACACCTCACAAGGTTCCCATTTT...AAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGCCCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GTGGAGAACACCTCACACCATCTTCTTGTTAACTGGCCGAGGAACAGAGTGAGGACGTGGAAGCCTGGGTaGACGCCCAGGGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: VENTSHHLLVNWPRNRVRTWKPG*TPRALA
Trigger: AGCCAGAGCCCTGGGCGTTCACCCAGGCTTCCACGT...CCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGGTGTTCTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGGGACAACTGTTGGTTCGACGGTaGCCCAAGCGAGGGGAACGT +
Preference number: 4 (lower is better)
Translates to: GQEDSSRALTTCSRMSGQLLVRR*PKRGER
Trigger: ACGTTCCCCTCGCTTGGGTCACCGTCGAACCAACAG...TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp CTAACTCATCCTGAAGCTGCCCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGCTGTTGGTTCGACGGTaGCCCAAGCGAGGGGAACGT +
Preference number: 4 (lower is better)
Translates to: LTHPEAAPGSSSAAHSPKLLVRR*PKRGER
Trigger: ACGTTCCCCTCGCTTGGGTCACCGTCGAACCAACAG...CTTGGGAGAATGAGCTGCAGAAGATGACCCGGGGGCAGCTTCAGGATGAGTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGACTCACAGGAGGGAGGTaGTGCTCTCCAAATGCTATG +
Preference number: 4 (lower is better)
Translates to: QRTGGERLLCSMALCQGRLTGGR*CSPNAM
Trigger: CATAGCATTTGGAGAGCATCACCTCCCTCCTGTGAG...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp GAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCCGCCTTGCAACAGGCTaGCTTTTTCCTTCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: ESSWPVPVPDHLFRHGLARLATG*LFPSSL
Trigger: AAGACTTGAAGGAAAAAGTCAGCCTGTTGCAAGGCG...GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACTGTCCTGTAGCTGCTaGGAGCTGTCGTTGAGATTG +
Preference number: 4 (lower is better)
Translates to: SGHGCWQGRQPLGGVQGKLSCSC*ELSLRL
Trigger: CAATCTCAACGACAGCTCTCAGCAGCTACAGGACAG...TTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCTGGGTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGAAGCTGGTGGAGTaGGTCCACGGAGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: PGLTTSGFPIKQGQEDSSRKLVE*VHGGSG
Trigger: CCCTGATCCTCCGTGGACTCACTCCACCAGCTTCCT...GGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAACCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCGCTCCCAAGCCATCGTaGGGCCTGCTCACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFAPKPS*GLLTAP
Trigger: GGGAGCTGTGAGCAGGCCTCACGATGGCTTGGGAGC...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCACATCTCTCCCTCACTaGGAAGTGGCCTTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSTSLPH*EVAFSR
Trigger: CCTTGAAAAGGCCACTTCTCAGTGAGGGAGAGATGT...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCACTGGGCTGCAGGAGCTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTTGCCAATACCTTCATTaGTTTGCAGTCTTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: PLGCRSSGHGCWQGRQPLCQYLH*FAVLGS
Trigger: TGACCCCAAGACTGCAAATCAATGAAGGTATTGGCA...AAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGCCCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCGGGAAGTTCCTGGACTaGTGGGGCTGTGCTGACTCT +
Preference number: 4 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFGKFLD*WGCADS
Trigger: AGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCC...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTCCACCGTGGCCCCGTaGAGGCTGTTATCACACCGC +
Preference number: 4 (lower is better)
Translates to: LVHWRHPLSLLNSKSIPGSTVAP*RLLSHR
Trigger: GCGGTGTGATAACAGCCTTCACGGGGCCACGGTGGA...ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGAGGGCTTCCTGACACACCCAGTGGCTaGGAGTGGCAGGCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: DIGPGNASSQKQCHRGLPDTPSG*EWQALH
Trigger: GTGCAGCGCCTGCCACTCTCAGCCACTGGGTGTGTC...AGGAAGCCCTCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGCAGAGACCAGACAGATaGTATCGGTCCCGGAAATGC +
Preference number: 4 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPQRPDR*YRSRKC
Trigger: GCATTTCCGGGACCGATATCATCTGTCTGGTCTCTG...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TGGGACAGTCAAGGGCTGGTGGTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGGGCCACGTTTATTACTaGACTCCTAGCCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: WDSQGLVVGSSWTDGAVLGHVYY*TPSQPP
Trigger: TGGAGGCTGGCTAGGAGTTCAGTAATAAACGTGGCC...CAGCACAGCCCCATCAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGGCCCATATGAAACCATaGCCACTAGGAGAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPAHMKP*PLGEGH
Trigger: ATGCCCCTCTCCTAGTGGTCATGGTTTCATATGGGC...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGTGGGGTCACAAACTGTaGAACCTCTACCCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPWGHKL*NLYPEV
Trigger: GACCTCTGGGTAGAGGTTTCACAGTTTGTGACCCCA...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTGGCGTGGTGTGGAATaGGGGGCTGGACCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLWRGVE*GAGPRG
Trigger: CCCTCTGGGTCCAGCCCCTCATTCCACACCACGCCA...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TGGGACAGTCAAGGGCTGGTGGTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGGCAACACTTCTCTTCTaGCGCATCAGGGAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: WDSQGLVVGSSWTDGAVLATLLF*RIREQS
Trigger: TGACTGCTCCCTGATGCGTCAGAAGAGAAGTGTTGC...CAGCACAGCCCCATCAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGCCACGTTTAGCCCAGCCCGGGCCGTaGGCAAGAAGCTGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: SESYKLHPLCPTARRPRLAQPGP*ARSWVG
Trigger: TCCTACCCAGCTTCTTGCTCACGGCCCGGGCTGGGC...TAAACGTGGCCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440394.7
CDS-3UTR TCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTGCCCAGCCCGGGCCGTaGGCAAGAAGCTGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSAQPGP*ARSWVG
Trigger: TCCTACCCAGCTTCTTGCTCACGGCCCGGGCTGGGC...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000546231.6
CDS-3UTR GCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGCGCTACTGCTGCTGCTaGCGCCCAGGCACCGCCGCC +
Preference number: 4 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVRYCCC*RPGTAA
Trigger: GGCGGCGGTGCCTGGGCGGCAGCAGCAGCAGTAGCG...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000360905.9
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
CDS-3UTR GCA 90 bp CATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCATGTCACGCTACTGCTGCTGCTaGCGCCCAGGCACCGCCGCC +
Preference number: 4 (lower is better)
Translates to: HPLSLLNSKSIPGFILMSRYCCC*RPGTAA
Trigger: GGCGGCGGTGCCTGGGCGGCAGCAGCAGCAGTAGCG...TGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000360905.9
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
CDS-3UTR GCA 90 bp GTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGACTCTACAGACTTTAAATTCTGGCTGCCGCTACTGCTaGTGCTGCCGCCCAGGCACC +
Preference number: 4 (lower is better)
Translates to: VGSSWTDGAVLTLQTLNSGCRYC*CCRPGT
Trigger: GGTGCCTGGGCGGCAGCAGCAGCAGTAGCGGCAGCC...AGAATTTAAAGTCTGTAGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360905.9
ENST00000440394.7
ENST00000543086.7
CDS-3UTR GCA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAAAGGGTTTTCCCACTaGCACCTCCAACACTGCTTC +
Preference number: 4 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSKGFSH*HLQHCF
Trigger: GAAGCAGTGTTGGAGGTGGCAGTGGGAAAACCCTTT...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGTGAGGTACAGTGGATaGCATACTCACAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: VRGQEVRGSSAPWLSVRAVRYSG*HTHRRE
Trigger: CTCCCTCCTGTGAGTATGGCATCCACTGTACCTCAC...TGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp CAGGCGCTGCACCTGATGAGAAAGTCCACGTGGGTGGGATCTGGGCCACCTGCTGCCTGGATTGTCATCTaGATGTGCTGGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: QALHLMRKSTWVGSGPPAAWIVI*MCWFSS
Trigger: GGAGGAAAACCAGCACATGCAGATGACAATCCAGGC...AGCAGGTGGCCCAGATCCCACCCACGTGGACTTTCTCATCAGGTGCAGCGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CAGGCGCTGCACCTGATGAGAAAGTCCACGTGGGTGGGATCTGGGCCACCTGCTGTTCGCCAGTCCTGCTaGTACTATCCTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: QALHLMRKSTWVGSGPPAVRQSC*YYPAET
Trigger: TGTTTCAGCAGGATAGTAGCAGCAGGACTGGCGAAC...AGCAGGTGGCCCAGATCCCACCCACGTGGACTTTCTCATCAGGTGCAGCGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GCTGCCCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTATGAACGTGCATCTCTaGCTCTGCCAGTCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: AAPGSSSAAHSPKPPGHRMNVHL*LCQSSC
Trigger: ACAAGACGACTGGCAGAGGCAGAGATGCACGTTCAT...ACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCGGGGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
CDS-3UTR GCA 90 bp GGAGAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGGCTCTGGCTTCCAATaGTGCCTCATGTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: GESSWPVPVPDHLFRHGLGSGFQ*CLMCLF
Trigger: AAAAAGGCACATGAGGCAGCATTGGAAGCCAGAGCC...GAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GGAGAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGAGTCGATCAACTTCTaGCTGGGCCTTGCTAGATTC +
Preference number: 4 (lower is better)
Translates to: GESSWPVPVPDHLFRHGLESINF*LGLARF
Trigger: GAATCTAGCAAGGCCCAGGCAGAAGTTGATCGACTC...GAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGGCGTTGGCAAACTCCTaGAGTTCTGCATTGTCCCGT +
Preference number: 4 (lower is better)
Translates to: PRRIRGSRSWQRVVRCPMALANS*SSALSR
Trigger: ACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGC...CATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp AGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGCCGTCGGGACAATGGTCTaGTATCTGCTGAAGAATGGC +
Preference number: 4 (lower is better)
Translates to: RTGGERLLCSMALCQGRAVGTMV*YLLKNG
Trigger: GCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC...GGCTCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp CCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGAGGGCGTTGACCACTTaGTCTAGGATGTCGGGACAA +
Preference number: 4 (lower is better)
Translates to: PRRIRGSRSWQRVVRCPMRALTT*SRMSGQ
Trigger: TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCT...CATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp CCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGAGGGCGTTGACCACTTaGTCTAGGATGTCGGGACAA +
Preference number: 4 (lower is better)
Translates to: PRVIFCSSFSQAAWSSSKRALTT*SRMSGQ
Trigger: TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCT...CTTGGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GTTCTGCATTGTCCCGTTCACCTTTCTCTAACTCATCCTGAAGCTGCCCCCGGGAGCCATCGTGAGGCCTaGTCACAGCTCCCCGGTACA +
Preference number: 4 (lower is better)
Translates to: VLHCPVHLSLTHPEAAPGSHREA*SQLPGT
Trigger: TGTACCGGGGAGCTGTGAGCAGGCCTCACGATGGCT...CCCGGGGGCAGCTTCAGGATGAGTTAGAGAAAGGTGAACGGGACAATGCAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000588412.5
CDS-3UTR GCA 90 bp GTGCTGCCCTCAGGATGTGTAGCTGCAGTAGATGGATGCAATACTGGCGTGGTGAGCCATCGTGAGGCCTaGTCACAGCTCCCCGGTACA +
Preference number: 4 (lower is better)
Translates to: VLPSGCVAAVDGCNTGVVSHREA*SQLPGT
Trigger: TGTACCGGGGAGCTGTGAGCAGGCCTCACGATGGCT...CACCACGCCAGTATTGCATCCATCTACTGCAGCTACACATCCTGAGGGCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATTACTATCTAACCCCTaGACCCCTCTCTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: QAGLDEDSDLGRTSAPKPLLSNP*TPLWPA
Trigger: GGCTGGCCAGAGAGGGGTGCAGGGGTTAGATAGTAA...TGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCTGGGTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCGCTGGCCAGTGCCCGTaGCAGACCACTTGTTTAGGC +
Preference number: 4 (lower is better)
Translates to: PGLTTSGFPIKQGQEDSSAGQCP*QTTCLG
Trigger: GCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGC...GGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAACCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355446.9
ENST00000440394.7
CDS-3UTR GCA 90 bp GTGCACGTGCATCCCAGACACCACCATGGAGGCTGCTACTGTTACCAAAAGGAAGGGATCTGGGCCACCTaGTTGGAGAGAGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: VHVHPRHHHGGCYCYQKEGIWAT*LERAAG
Trigger: GCCAGCTGCTCTCTCCAAGCAGGTGGCCCAGATCCC...TTCCTTTTGGTAACAGTAGCAGCCTCCATGGTGGTGTCTGGGATGCACGTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTAAACTGCATCCACTCTaGCCTACAGCACGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: PVPVPDHLFRHGLACCLGKLHPL*PTARRP
Trigger: TGGCCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTT...ACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCACTGGGCTGCAGGAGCTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTACCCACTCTTCTTCGTaGCCTCTTTATGGTGACATT +
Preference number: 4 (lower is better)
Translates to: PLGCRSSGHGCWQGRQPLTHSSS*PLYGDI
Trigger: AATGTCACCATAAAGAGGGCACGAAGAAGAGTGGGT...AAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGCCCAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTGCAGAGGGTGCCTGCTaGATTGCAGTCTCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: PVPVPDHLFRHGLACCLGAEGAC*IAVSSH
Trigger: ATGAGAAGAGACTGCAATGCAGCAGGCACCCTCTGC...ACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTCTTGGTTCCACCGTGGCCCCGTGAAGGCTGTTATCACACCGCAGTTCTTTACCCCCACTGGATATCCTaGAATGCCCGGCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: VLVPPWPREGCYHTAVLYPHWIS*NARQVP
Trigger: AGGCACCTGCCGGGCATTGCAGGATATCCAGTGGGG...GTAAAGAACTGCGGTGTGATAACAGCCTTCACGGGGCCACGGTGGAACCAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGCCGGGCACTTCCATACATaGTTGCAAGGTCAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: RTGGERLLCSMALCQGRAGHFHT*LQGQER
Trigger: CCTTTCCTGACCTTGCAACCATGTATGGAAGTGCCC...GGCTCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp GGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTGAACGCCCAGGGCTCTaGCTGCTCGGCTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: GPLEASSQPVELQVHSWFERPGL*LLGSTF
Trigger: GAAGGTGGAGCCGAGCAGCCAGAGCCCTGGGCGTTC...AAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp CTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTGGGAACGTGGAAGCCTaGGTGAACGCCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: LVHWRHPLSLLNSKSIPGGNVEA*VNAQGS
Trigger: AGAGCCCTGGGCGTTCACCCAGGCTTCCACGTTCCC...ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTGGGAACGTGGAAGCCTaGGTGAACGCCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTGNVEA*VNAQGS
Trigger: AGAGCCCTGGGCGTTCACCCAGGCTTCCACGTTCCC...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGGGAGTGAGGTACAGTaGATGCCATACTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: QRTGGERLLCSMALCQGRGSEVQ*MPYSQE
Trigger: CTCCTGTGAGTATGGCATCCACTGTACCTCACTCCC...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGCCTCATCCTGGAGAGCCTaGATTGTCATCTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: RTGGERLLCSMALCQGRASSWRA*IVICMC
Trigger: GCACATGCAGATGACAATCCAGGCTCTCCAGGATGA...GGCTCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp GAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCATCCGCAATTCATCCTaGAGAGCCTGGATTGTCATC +
Preference number: 4 (lower is better)
Translates to: ESSWPVPVPDHLFRHGLAIRNSS*RAWIVI
Trigger: GATGACAATCCAGGCTCTCCAGGATGAATTGCGGAT...GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTCACTCATCTCTGGACTaGCTCTGGCTTCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: PVPVPDHLFRHGLACCLGHSSLD*LWLPML
Trigger: CAGCATTGGAAGCCAGAGCCAGTCCAGAGATGAGTG...ACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTCCAGAGACTGCTGGGTaGAGGACAGCTTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: PVPVPDHLFRHGLACCLGPETAG*RTALLS
Trigger: TGAAAGCAAAGCTGTCCTCCACCCAGCAGTCTCTGG...ACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGCCAGAGACTGCTGGGTaGAGGACAGCTTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: PRVIFCSSFSQAAWSSSKPETAG*RTALLS
Trigger: TGAAAGCAAAGCTGTCCTCCACCCAGCAGTCTCTGG...CTTGGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GGAGAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCCTGGATGATCTGGTCTaGGGAGGGCTTGTGATTTGT +
Preference number: 4 (lower is better)
Translates to: GESSWPVPVPDHLFRHGLLDDLV*GGLVIC
Trigger: ACAAATCACAAGCCCTCCCCAGACCAGATCATCCAG...GAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGGGACAGTCAAGGGCTGGTGGTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGAGTTCTAAGAGGGGCTaGATGATCTGGTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: WDSQGLVVGSSWTDGAVLSSKRG*MIWSGE
Trigger: CTCCCCAGACCAGATCATCCAGCCCCTCTTAGAACT...CAGCACAGCCCCATCAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCTGGTGGAGTGAGTCCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGCTGAAGAATGGCGTTaGCAAACTCCTGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: AGGVSPRRIRGSRSWQRVAEEWR*QTPAVL
Trigger: CAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGC...AACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGGACTCACTCCACCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CTTCCTCCTCAGTTCCGAACCCAGGCAGGTGAAGAGGAGGCCAGGAGCAGATGTAGCTCTCTGGTCCATTaGAGGCATCCTCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LPPQFRTQAGEEEARSRCSSLVH*RHPLSL
Trigger: CAGGCTGAGAGGATGCCTCCAATGGACCAGAGAGCT...ACATCTGCTCCTGGCCTCCTCTTCACCTGCCTGGGTTCGGAACTGAGGAGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGGAACACTCAGCTCTCTaGTCCATTGGAGGCATCCTC +
Preference number: 4 (lower is better)
Translates to: ARQAASWRCSGETSPRATEHSAL*SIGGIL
Trigger: GAGGATGCCTCCAATGGACCAGAGAGCTGAGTGTTC...CGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GGAGAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCAACAGGAGAGACTGGTaGAGAACACCTCACACCATC +
Preference number: 4 (lower is better)
Translates to: GESSWPVPVPDHLFRHGLNRRDW*RTPHTI
Trigger: GATGGTGTGAGGTGTTCTCCACCAGTCTCTCCTGTT...GAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCTCAAACAGGAGAGACTaGTGGAGAACACCTCACACC +
Preference number: 4 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSSNRRD*WRTPHT
Trigger: GGTGTGAGGTGTTCTCCACCAGTCTCTCCTGTTTGA...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCAACAGTCAAGGGCTGGTaGTGGGAAGTTCCTGGACTG +
Preference number: 4 (lower is better)
Translates to: QAGLDEDSDLGRTSAPKPTVKGW*WEVPGL
Trigger: CAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGT...TGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CTTCCTCCTCAGTTCCGAACCCAGGCAGGTGAAGAGGAGGCCAGGAGCAGATGTCCTCTCTGGCCAGCCTaGCTATCAGGAAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: LPPQFRTQAGEEEARSRCPLWPA*LSGSIS
Trigger: TGAGATGCTTCCTGATAGCCAGGCTGGCCAGAGAGG...ACATCTGCTCCTGGCCTCCTCTTCACCTGCCTGGGTTCGGAACTGAGGAGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCCCTGCCTTTCAGTGCTaGGAGCTTTCTACATGGTTT +
Preference number: 4 (lower is better)
Translates to: ESSWPVPVPDHLFRHGLAPAFQC*ELSTWF
Trigger: AAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG...GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGCCGATGGAGGGGTTTaGGGAAAATTAAGGGCAACC +
Preference number: 4 (lower is better)
Translates to: QRTGGERLLCSMALCQGRADGGV*GKLRAT
Trigger: GGTTGCCCTTAATTTTCCCCAAACCCCTCCATCGGC...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGGCCGATGGAGGGGTTTaGGGAAAATTAAGGGCAACC +
Preference number: 4 (lower is better)
Translates to: ARQAASWRCSGETSPRATADGGV*GKLRAT
Trigger: GGTTGCCCTTAATTTTCCCCAAACCCCTCCATCGGC...CGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATCCATCTTGGCCAGGCTaGCCTCGAACTCCTGATCTC +
Preference number: 4 (lower is better)
Translates to: RQGWMKTQTLGERVLPSHPSWPG*PRTPDL
Trigger: GAGATCAGGAGTTCGAGGCCAGCCTGGCCAAGATGG...ATGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGCGACAGACAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTAGAGAGGAGGTGGGATaGGACAAAAACCCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: CDRQAGLDEDSDLGRTSAREEVG*DKNPLP
Trigger: GGGGAGCGGGTTTTTGTCCCATCCCACCTCCTCTCT...AGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTGTCTGTCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCGGCCTCACTCTGCAGAGGGTGCCTGCTGCATTGCAGTCTCTTCTCATCCTTCCTCACCCGTGCTGGGTaGTCACTGGAAGAGATAGCA +
Preference number: 4 (lower is better)
Translates to: AASLCRGCLLHCSLFSSFLTRAG*SLEEIA
Trigger: TGCTATCTCTTCCAGTGACCACCCAGCACGGGTGAG...GAAGGATGAGAAGAGACTGCAATGCAGCAGGCACCCTCTGCAGAGTGAGGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTTTGCAGGCTCCAGGCTaGCCAGTGCTCACCCGTGCT +
Preference number: 4 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTLQAPG*PVLTRA
Trigger: AGCACGGGTGAGCACTGGCCAGCCTGGAGCCTGCAA...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GGAGAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCCAGAAGGAACTGACATaGAGGACAGTCTGTTCCACC +
Preference number: 4 (lower is better)
Translates to: GESSWPVPVPDHLFRHGLQKELT*RTVCST
Trigger: GGTGGAACAGACTGTCCTCCATGTCAGTTCCTTCTG...GAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTGGTTTGGGGTGCAGATCTTTGCCCGGCAGGTGCCTaGGCTAGTCCTGCGATGGGC +
Preference number: 4 (lower is better)
Translates to: PTLLRALFMVTLVWGADLCPAGA*ASPAMG
Trigger: GCCCATCGCAGGACTAGCCCAGGCACCTGCCGGGCA...AAGATCTGCACCCCAAACCAATGTCACCATAAAGAGGGCACGAAGAAGAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCAGTCACAGGCCCCACTaGATATCCTGCAATGCCCGG +
Preference number: 4 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFSHRPH*ISCNAR
Trigger: CCGGGCATTGCAGGATATCCAGTGGGGCCTGTGACT...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CAA 72 bp CAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTaGGTTCCACCGTGGCCCCGTGAAGGCTGTTATCAC +
Preference number: 4 (lower is better)
Translates to: QTTCLGMASPAV*VPPWPREGCYH
Trigger: GTGATAACAGCCTTCACGGGGCCACGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR CAA 72 bp AACTGCGAGGCTCTGAGCCCCAGATTCTCGTTCCTTTaGCTCGGCAGGTGTCTCTTGCCCAGGCAGGCACTA +
Preference number: 4 (lower is better)
Translates to: NCEALSPRFSFL*LGRCLLPRQAL
Trigger: TAGTGCCTGCCTGGGCAAGAGACACCTGCCGAGCAAAAGGAACGAGAATCTGGGGCTCAGAGCCTCGCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCACTGGGCTGCAGGAGCTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTAGGTCAGGAAAGGTGTaGGCAGAAAATCAACAACAA +
Preference number: 4 (lower is better)
Translates to: PLGCRSSGHGCWQGRQPLRSGKV*AENQQQ
Trigger: TTGTTGTTGATTTTCTGCTCACACCTTTCCTGACCT...AAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGCCCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACGTGGAAGCCTGGGTaGACGCCCAGGGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: YLLKNGVGKLLQFCIVPFTWKPG*TPRALA
Trigger: AGCCAGAGCCCTGGGCGTTCACCCAGGCTTCCACGT...GAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp TCCAGCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGACGTGGAAGCCTGGGTaGACGCCCAGGGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: SSRYVSQNPLHLSLTEKWTWKPG*TPRALA
Trigger: AGCCAGAGCCCTGGGCGTTCACCCAGGCTTCCACGT...CCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GGAGAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGTGTCTGCAGATCCATaGTTGTGTTATCTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: GESSWPVPVPDHLFRHGLVSADP*LCYLSP
Trigger: AGGCGAGAGATAACACAATCATGGATCTGCAGACAC...GAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CAGGCGCTGCACCTGATGAGAAAGTCCACGTGGGTGGGATCTGGGCCACCTGCTCATCCAACATGTCCTTaGGGTCATGTATCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: QALHLMRKSTWVGSGPPAHPTCP*GHVSLQ
Trigger: CTGGAGAGATACATGACCTCAAGGACATGTTGGATG...AGCAGGTGGCCCAGATCCCACCCACGTGGACTTTCTCATCAGGTGCAGCGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGTCCTTTTTCAGTCCTaGGGATGCCAGAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: VRGQEVRGSSAPWLSVRAVLFQS*GCQRRS
Trigger: GCTTCTTCTCTGGCATCCTCAGGACTGAAAAAGGAC...TGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGTCCTTTTTCAGTCCTaGGGATGCCAGAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: QRTGGERLLCSMALCQGRVLFQS*GCQRRS
Trigger: GCTTCTTCTCTGGCATCCTCAGGACTGAAAAAGGAC...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp TCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCGCTGAGAGCTGTCGTTaGGATTGTCCTCCCGTCGTC +
Preference number: 4 (lower is better)
Translates to: SFSCQRTGGERLLCSMALAESCR*DCPPVV
Trigger: GACGACGGGAGGACAATCTCAACGACAGCTCTCAGC...GAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp TTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGAAGCTGGTGGAGTaGGTCCACGGAGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: FPIKQGQEDSSRALTTCSRKLVE*VHGGSG
Trigger: CCCTGATCCTCCGTGGACTCACTCCACCAGCTTCCT...AGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGATGGTCTGCTATCTGCTaGAGAATGGCGTTGGCAAAC +
Preference number: 4 (lower is better)
Translates to: QRTGGERLLCSMALCQGRWSAIC*RMALAN
Trigger: GTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCA...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp CAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCAACTCTTCCAGGGCGTTaGCCACTTGCTCTAGGATGT +
Preference number: 4 (lower is better)
Translates to: QAGLDEDSDLGRTSAPKPTLPGR*PLALGC
Trigger: ACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGT...TGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp CGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGTACACTCTTCCAGGGCGTTaGCCACTTGCTCTAGGATGT +
Preference number: 4 (lower is better)
Translates to: RRIRGSRSWQRVVRCPMYTLPGR*PLALGC
Trigger: ACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGT...GTACATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp CCACTGGGCTGCAGGAGCTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTTCACACTTCTTCAAGTaGGCAAGTTGGGATGAAGTT +
Preference number: 4 (lower is better)
Translates to: PLGCRSSGHGCWQGRQPLSHFFK*ASWDEV
Trigger: AACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGA...AAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGCCCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AAACCCCGTTGGGATCACACCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTGCTCCCAAGCCATCGTaGGGCCTGCTCACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: KPRWDHTHSSSCPLYGDIAPKPS*GLLTAP
Trigger: GGGAGCTGTGAGCAGGCCTCACGATGGCTTGGGAGC...AATGTCACCATAAAGAGGGCACGAAGAAGAGTGGGTGTGATCCCAACGGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTGGCCGAGGAACAGAGTaGGGAAGGCTGCGACAGACA +
Preference number: 4 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTGRGTE*GRLRQT
Trigger: TGTCTGTCGCAGCCTTCCTCACTCTGTTCCTCGGCC...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp GTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAACATCTCTCCCTCACTaGGAAGTGGCCTTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: VRGQEVRGSSAPWLSVRATSLPH*EVAFSR
Trigger: CCTTGAAAAGGCCACTTCTCAGTGAGGGAGAGATGT...TGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCTGGGTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCCTACAGGCAAGCGGGTaGCTGAGACCCCCAAACTCA +
Preference number: 4 (lower is better)
Translates to: PGLTTSGFPIKQGQEDSSLQASG*LRPPNS
Trigger: TGAGTTTGGGGGTCTCAGTCACCCGCTTGCCTGTAG...GGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAACCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355446.9
ENST00000440394.7
CDS-3UTR TCA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGGGGAGCTGGAAATCTaGCCATGTCAGTTAATGGGA +
Preference number: 4 (lower is better)
Translates to: QRTGGERLLCSMALCQGRGELEI*PCQLMG
Trigger: TCCCATTAACTGACATGGTCAGATTTCCAGCTCCCC...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCTCCACCGTGGCCCCGTaGAGGCTGTTATCACACCGC +
Preference number: 4 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFSTVAP*RLLSHR
Trigger: GCGGTGTGATAACAGCCTTCACGGGGCCACGGTGGA...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTCATCAATGATTCAATaGGTACCGGGGGTTAGAGGT +
Preference number: 4 (lower is better)
Translates to: ESSWPVPVPDHLFRHGLASSMIQ*VPGVRG
Trigger: ACCTCTAACCCCCGGTACTCATTGAATCATTGATGA...GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCGAGATACCTCATCAATaGTTCAATGAGTACCGGGGG +
Preference number: 4 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSEIPHQ*FNEYRG
Trigger: CCCCCGGTACTCATTGAATCATTGATGAGGTATCTC...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GTGGAGAACACCTCACACCATCTTCTTGTTAACTGGCCGAGGAACAGAGTGAGGCACTCTGGGGGTGGGTaGGCCCGCAAGTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: VENTSHHLLVNWPRNRVRHSGGG*ARKFLM
Trigger: CATGAGGAACTTGCGGGCTCACCCACCCCCAGAGTG...CCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGGTGTTCTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGTTTTGGGGTGACACATaGTGGTTGCCTCACAACCCT +
Preference number: 4 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPFWGDT*WLPHNP
Trigger: AGGGTTGTGAGGCAACCATCATGTGTCACCCCAAAA...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TGGGACAGTCAAGGGCTGGTGGTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGGAAGCCAGAAGGAACTaGCATGGAGGACAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: WDSQGLVVGSSWTDGAVLEARRN*HGGQSV
Trigger: AACAGACTGTCCTCCATGTCAGTTCCTTCTGGCTTC...CAGCACAGCCCCATCAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTGGCTGCCGCTACTGCTaGTGCTGCCGCCCAGGCACC +
Preference number: 4 (lower is better)
Translates to: RYVSQNPLHLSLTEKWPFGCRYC*CCRPGT
Trigger: GGTGCCTGGGCGGCAGCAGCAGCAGTAGCGGCAGCC...AAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000360905.9
ENST00000440394.7
ENST00000543086.7
CDS-3UTR GCA 90 bp TTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTTGCCACCTCCAACACTaGTTCCCGAACTCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: FPIKQGQEDSSRALTTCSCHLQH*FPNSLP
Trigger: CGGGAGGGAGTTCGGGAAGCAGTGTTGGAGGTGGCA...AGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp CTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTGCCACCTCCAACACTaGTTCCCGAACTCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: LVHWRHPLSLLNSKSIPGCHLQH*FPNSLP
Trigger: CGGGAGGGAGTTCGGGAAGCAGTGTTGGAGGTGGCA...ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGCCTGGATTGTCATCTaGATGTGCTGGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: QRTGGERLLCSMALCQGRAWIVI*MCWFSS
Trigger: GGAGGAAAACCAGCACATGCAGATGACAATCCAGGC...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp TGGGACAGTCAAGGGCTGGTGGTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGAAGGTTCGCCAGTCCTaGTGCTACTATCCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: WDSQGLVVGSSWTDGAVLKVRQS*CYYPAE
Trigger: TTCAGCAGGATAGTAGCAGCAGGACTGGCGAACCTT...CAGCACAGCCCCATCAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAAAGGTTCGCCAGTCCTaGTGCTACTATCCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: VRGQEVRGSSAPWLSVRAKVRQS*CYYPAE
Trigger: TTCAGCAGGATAGTAGCAGCAGGACTGGCGAACCTT...TGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGAGTCGATCAACTTCTaGCTGGGCCTTGCTAGATTC +
Preference number: 4 (lower is better)
Translates to: QRTGGERLLCSMALCQGRESINF*LGLARF
Trigger: GAATCTAGCAAGGCCCAGGCAGAAGTTGATCGACTC...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp GCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGGAGTCGATCAACTTCTaGCTGGGCCTTGCTAGATTC +
Preference number: 4 (lower is better)
Translates to: ARQAASWRCSGETSPRATESINF*LGLARF
Trigger: GAATCTAGCAAGGCCCAGGCAGAAGTTGATCGACTC...CGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCATGGATTCTAGTTCCTaGTTTACCTTCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: ESSWPVPVPDHLFRHGLAMDSSS*FTFSMA
Trigger: GGCCATGGAGAAGGTAAAGCAGGAACTAGAATCCAT...GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCATTTTCTGCCAGAGACTaGTGGGTGGAGGACAGCTTT +
Preference number: 4 (lower is better)
Translates to: VRGQEVRGSSAPWLSVRAFSARD*WVEDSF
Trigger: AAAGCTGTCCTCCACCCAGCAGTCTCTGGCAGAAAA...TGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp TCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAATTTTCTGCCAGAGACTaGTGGGTGGAGGACAGCTTT +
Preference number: 4 (lower is better)
Translates to: SGHGCWQGRQPLGGVQGKFSARD*WVEDSF
Trigger: AAAGCTGTCCTCCACCCAGCAGTCTCTGGCAGAAAA...TTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGTTTTCTGCCAGAGACTaGTGGGTGGAGGACAGCTTT +
Preference number: 4 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPFSARD*WVEDSF
Trigger: AAAGCTGTCCTCCACCCAGCAGTCTCTGGCAGAAAA...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAAGTGAGTTTCCTTTTCTaGCAGAGACTGCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: SGHGCWQGRQPLGGVQGKVSFLF*QRLLGG
Trigger: TCCACCCAGCAGTCTCTGGCAGAAAAGGAAACTCAC...TTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAAGTCTGCTGCTTAAGCTaGTGTACCAGACGATCCTTC +
Preference number: 4 (lower is better)
Translates to: SGHGCWQGRQPLGGVQGKVCCLS*CTRRSF
Trigger: GAAGGATCGTCTGGTACAGCAGCTTAAGCAGCAGAC...TTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGTCTGCTGCTTAAGCTaGTGTACCAGACGATCCTTC +
Preference number: 4 (lower is better)
Translates to: QRTGGERLLCSMALCQGRVCCLS*CTRRSF
Trigger: GAAGGATCGTCTGGTACAGCAGCTTAAGCAGCAGAC...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp TGGGACAGTCAAGGGCTGGTGGTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGGTTTGTAGTGTTTGGTaGCAAGAAGGTTCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: WDSQGLVVGSSWTDGAVLVCSVW*QEGSGH
Trigger: GTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC...CAGCACAGCCCCATCAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGCCTTGGGAGAACGAGTaGTCCCAAGCCATCGTGAGG +
Preference number: 4 (lower is better)
Translates to: KQGQEDSSRALTTCSRMSPWENE*SQAIVR
Trigger: CCTCACGATGGCTTGGGAGCACTCGTTCTCCCAAGG...CGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000588412.5
CDS-3UTR GCA 90 bp CTAACTCATCCTGAAGCTGCCCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGTTACTGGGGCAAAGCTaGAGGCGGGGACAACAGGGT +
Preference number: 4 (lower is better)
Translates to: LTHPEAAPGSSSAAHSPKLLGQS*RRGQQG
Trigger: ACCCTGTTGTCCCCGCCTGCAGCTTTGCCCCAGTAA...CTTGGGAGAATGAGCTGCAGAAGATGACCCGGGGGCAGCTTCAGGATGAGTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000347735.10
ENST00000440394.7
CDS-3UTR GCA 90 bp CCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACAGCTCAGGACACGGGTaGTGGCAAGGCAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PAFQCWELSTWFTGTAMNSSGHG*WQGRQP
Trigger: AGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCT...GTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CTTCCTCCTCAGTTCCGAACCCAGGCAGGTGAAGAGGAGGCCAGGAGCAGATGTGAAGGTTCCAGGCAATaGACGAGGCTGAGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: LPPQFRTQAGEEEARSRCEGSRQ*TRLRFR
Trigger: TCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTC...ACATCTGCTCCTGGCCTCCTCTTCACCTGCCTGGGTTCGGAACTGAGGAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATTTACTATCTAACCCCTaGACCCCTCTCTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: RQGWMKTQTLGERVLPSHLLSNP*TPLWPA
Trigger: GGCTGGCCAGAGAGGGGTGCAGGGGTTAGATAGTAA...ATGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCAGCTGGCCAGTGCCCGTaGCAGACCACTTGTTTAGGC +
Preference number: 4 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPAGQCP*QTTCLG
Trigger: GCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGC...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTGGAGAACACCTCACACCATCTTCTTGTTAACTGGCCGAGGAACAGAGTGAGGGGGATCTGGGCCACCTaGTTGGAGAGAGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: VENTSHHLLVNWPRNRVRGIWAT*LERAAG
Trigger: GCCAGCTGCTCTCTCCAAGCAGGTGGCCCAGATCCC...CCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGGTGTTCTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATCTAGCCAGCCTCCAGTaGCCAAGAACGGTCAAGAAG +
Preference number: 4 (lower is better)
Translates to: RQGWMKTQTLGERVLPSHLASLQ*PRTVKK
Trigger: CTTCTTGACCGTTCTTGGGCACTGGAGGCTGGCTAG...ATGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGCGGGCGGCCTCACTCTaGAGAGGGTGCCTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: EMLTLLPFSAGSFLHGLRRAASL*RGCLLH
Trigger: ATGCAGCAGGCACCCTCTGCAGAGTGAGGCCGCCCG...CCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp ACACACCTTAAGATCGGGGAGGGGAAGGACATGCTATTTACTGCTTCAACTCCAGCCCAGGGCCACCTATaGCAGCCTGGGAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: THLKIGEGKDMLFTASTPAQGHL*QPGRRG
Trigger: TCCCCTCCTCCCAGGCTGGCATAGGTGGCCCTGGGC...TGGAGTTGAAGCAGTAAATAGCATGTCCTTCCCCTCCCCGATCTTAAGGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp ATAAAGCGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGGCCCAGGGCCACCTATaGCAGCCTGGGAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: IKRDANTPAFQCWELSTWAQGHL*QPGRRG
Trigger: TCCCCTCCTCCCAGGCTGGCATAGGTGGCCCTGGGC...CCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCGCTTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGAGGGCTTCCTGGCAGCGGGTGCACGTaGATCCCAGACACCACCATG +
Preference number: 4 (lower is better)
Translates to: DIGPGNASSQKQCHRGLPGSGCT*IPDTTM
Trigger: CATGGTGGTGTCTGGGATGCACGTGCACCCGCTGCC...AGGAAGCCCTCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGGGGCACTTCCATACATaGTTGCAAGGTCAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPGHFHT*LQGQER
Trigger: CCTTTCCTGACCTTGCAACCATGTATGGAAGTGCCC...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGGGGCACTTCCATACATaGTTGCAAGGTCAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: PRVIFCSSFSQAAWSSSKGHFHT*LQGQER
Trigger: CCTTTCCTGACCTTGCAACCATGTATGGAAGTGCCC...CTTGGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTAACTCAGAACGCCCAGGGCTCTaGCTGCTCGGCTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: ALANSCSSALSRSPFSNSERPGL*LLGSTF
Trigger: GAAGGTGGAGCCGAGCAGCCAGAGCCCTGGGCGTTC...TGAGTTAGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTGAACGCCCAGGGCTCTaGCTGCTCGGCTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: LSAEEWRWQTPAVLHCPVERPGL*LLGSTF
Trigger: GAAGGTGGAGCCGAGCAGCCAGAGCCCTGGGCGTTC...AACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GTGGAGAACACCTCACACCATCTTCTTGTTAACTGGCCGAGGAACAGAGTGAGGGGGAACGTGGAAGCCTaGGTGAACGCCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: VENTSHHLLVNWPRNRVRGNVEA*VNAQGS
Trigger: AGAGCCCTGGGCGTTCACCCAGGCTTCCACGTTCCC...CCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGGTGTTCTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGAGGGCTTCCTGGGAACGTGGAAGCCTaGGTGAACGCCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: DIGPGNASSQKQCHRGLPGNVEA*VNAQGS
Trigger: AGAGCCCTGGGCGTTCACCCAGGCTTCCACGTTCCC...AGGAAGCCCTCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTCCCTCCCGTACTGTTaGTTCGACGGTGACCCAAGC +
Preference number: 4 (lower is better)
Translates to: LTTSGFPIKQGQEDSSRASLPYC*FDGDPS
Trigger: GCTTGGGTCACCGTCGAACCAACAGTACGGGAGGGA...CGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GGAGAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCTTCCTTCTTCAGCTCTaGGCTCCAGAAGGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: GESSWPVPVPDHLFRHGLFLLQL*APEGLD
Trigger: ATCAAGACCTTCTGGAGCCCAGAGCTGAAGAAGGAA...GAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCATCATCCTGGAGAGCCTaGATTGTCATCTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: VRGQEVRGSSAPWLSVRASSWRA*IVICMC
Trigger: GCACATGCAGATGACAATCCAGGCTCTCCAGGATGA...TGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp GCTGGTGGAGTGAGTCCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTATCCGCAATTCATCCTaGAGAGCCTGGATTGTCATC +
Preference number: 4 (lower is better)
Translates to: AGGVSPRRIRGSRSWQRVIRNSS*RAWIVI
Trigger: GATGACAATCCAGGCTCTCCAGGATGAATTGCGGAT...AACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGGACTCACTCCACCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
CDS-3UTR CCA 90 bp CAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCAGAAGAAACAGCTCTTTaGCCTGCCGCTCATGCTCAG +
Preference number: 4 (lower is better)
Translates to: QAGLDEDSDLGRTSAPKPEETAL*PAAHAQ
Trigger: CTGAGCATGAGCGGCAGGCCAAAGAGCTGTTTCTTC...TGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGACGTCTTGTTCTCTCATaGTCTTCCTCGGTAGCCTTG +
Preference number: 4 (lower is better)
Translates to: QRTGGERLLCSMALCQGRRLVLS*SSSVAL
Trigger: CAAGGCTACCGAGGAAGACCATGAGAGAACAAGACG...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp GCTGCCCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTGCTTTACCTTCTCCATaGCCATCAGTAACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: AAPGSSSAAHSPKPPGHRALPSP*PSVTPP
Trigger: TGGAGGAGTTACTGATGGCCATGGAGAAGGTAAAGC...ACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCGGGGGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGGCAGCCACTTCCTCTTaGGTCTTCTTCTTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: PRVIFCSSFSQAAWSSSKAATSS*VFFLED
Trigger: GTCCTCTAAGAAGAAGACCCAAGAGGAAGTGGCTGC...CTTGGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCAAGTTCTAAGAGGGGCTaGATGATCTGGTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: QAGLDEDSDLGRTSAPKPSSKRG*MIWSGE
Trigger: CTCCCCAGACCAGATCATCCAGCCCCTCTTAGAACT...TGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGGGACAGTCAAGGGCTGGTGGTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGGTTATAGGAAGCTGGTaGAGTGAGTCCACGGAGGAT +
Preference number: 4 (lower is better)
Translates to: WDSQGLVVGSSWTDGAVLVIGSW*SESTED
Trigger: ATCCTCCGTGGACTCACTCCACCAGCTTCCTATAAC...CAGCACAGCCCCATCAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGGTTATAGGAAGCTGGTaGAGTGAGTCCACGGAGGAT +
Preference number: 4 (lower is better)
Translates to: ARQAASWRCSGETSPRATVIGSW*SESTED
Trigger: ATCCTCCGTGGACTCACTCCACCAGCTTCCTATAAC...CGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGGGACAGTCAAGGGCTGGTGGTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGGCTGAAGAATGGCGTTaGCAAACTCCTGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: WDSQGLVVGSSWTDGAVLAEEWR*QTPAVL
Trigger: CAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGC...CAGCACAGCCCCATCAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCCTGCTGATGACCAGGTaGCAGTTCTTCAGAGAGATT +
Preference number: 4 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSLLMTR*QFFREI
Trigger: AATCTCTCTGAAGAACTGCCACCTGGTCATCAGCAG...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCTGGTGGAGTGAGTCCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTCTGCTGATGACCAGGTaGCAGTTCTTCAGAGAGATT +
Preference number: 4 (lower is better)
Translates to: AGGVSPRRIRGSRSWQRVLLMTR*QFFREI
Trigger: AATCTCTCTGAAGAACTGCCACCTGGTCATCAGCAG...AACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGGACTCACTCCACCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000588412.5
CDS-3UTR CCA 90 bp GCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGTCAAACAGGAGAGACTaGTGGAGAACACCTCACACC +
Preference number: 4 (lower is better)
Translates to: ARQAASWRCSGETSPRATSNRRD*WRTPHT
Trigger: GGTGTGAGGTGTTCTCCACCAGTCTCTCCTGTTTGA...CGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGACGGGCATCTGTTACTaGGGCAAAGCTGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLTGICY*GKAAGG
Trigger: CCCGCCTGCAGCTTTGCCCCAGTAACAGATGCCCGT...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCAGGCAGGCAGCCTCTTaGAGGTGTTCAGGGGAAACC +
Preference number: 4 (lower is better)
Translates to: SFSCQRTGGERLLCSMALRQAAS*RCSGET
Trigger: GGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCT...GAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGGGACAAAACTTCAGCAGCCACTaGGCTGCAGGAGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: GQEDSSRALTTCSRMSGQNFSSH*AAGAQD
Trigger: GTCCTGAGCTCCTGCAGCCCAGTGGCTGCTGAAGTT...TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
CDS-3UTR CCA 90 bp GACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCCTCGCCTGCTGTCTTaGTTCCACCGTGGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: DNGLLSAEEWRWQTPAVLPRLLS*FHRGPV
Trigger: CACGGGGCCACGGTGGAACCAAGACAGCAGGCGAGG...CAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355446.9
ENST00000440394.7
CDS-3UTR CCA 90 bp CGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCACTCTCACTCTGGGGGTaGGTGAGCCCGCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: RAPVPRSSLFLAPGLTTSLSLWG*VSPQVP
Trigger: AGGAACTTGCGGGCTCACCCACCCCCAGAGTGAGAG...TGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GGAGAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCAAATCCAAATGCCAGTaGATGGGCGGCTCAGAAACA +
Preference number: 4 (lower is better)
Translates to: GESSWPVPVPDHLFRHGLKSKCQ*MGGSET
Trigger: TGTTTCTGAGCCGCCCATCCACTGGCATTTGGATTT...GAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CAGGCGCTGCACCTGATGAGAAAGTCCACGTGGGTGGGATCTGGGCCACCTGCTAAATCCAAATGCCAGTaGATGGGCGGCTCAGAAACA +
Preference number: 4 (lower is better)
Translates to: QALHLMRKSTWVGSGPPAKSKCQ*MGGSET
Trigger: TGTTTCTGAGCCGCCCATCCACTGGCATTTGGATTT...AGCAGGTGGCCCAGATCCCACCCACGTGGACTTTCTCATCAGGTGCAGCGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTGCTGCCCTCAGGATGTGTAGCTGCAGTAGATGGATGCAATACTGGCGTGGTGAACAGGAGGGCGGGATaGTTCTGGGAGGAACAGGAC +
Preference number: 4 (lower is better)
Translates to: VLPSGCVAAVDGCNTGVVNRRAG*FWEEQD
Trigger: GTCCTGTTCCTCCCAGAACCATCCCGCCCTCCTGTT...CACCACGCCAGTATTGCATCCATCTACTGCAGCTACACATCCTGAGGGCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGAGACATTCCTTTGAGTaGTTCACGTCCCCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: ARQAASWRCSGETSPRATRHSFE*FTSPPE
Trigger: CTCAGGAGGGGACGTGAACCACTCAAAGGAATGTCT...CGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CTGCCCTACAGCACGAAGGCCACGTTTATTACTGAACTCCTAGCCAGCCTCCAGAGAGAGGAGGTGGGATaGGACAAAAACCCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LPYSTKATFITELLASLQREEVG*DKNPLP
Trigger: GGGGAGCGGGTTTTTGTCCCATCCCACCTCCTCTCT...CTGGAGGCTGGCTAGGAGTTCAGTAATAAACGTGGCCTTCGTGCTGTAGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTTTCCTCTCACAGGGAGAGGGATTGTTTCACAGCAGGGAGTAGGGGGAGCTGGAGTGCTCACCCGTGCTaGGTGGTCACTGGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: VSSHRERDCFTAGSRGSWSAHPC*VVTGRD
Trigger: ATCTCTTCCAGTGACCACCCAGCACGGGTGAGCACT...CCAGCTCCCCCTACTCCCTGCTGTGAAACAATCCCTCTCCCTGTGAGAGGAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAAAATGGGAACCTTGTaGGGTGTCTCTATGGCTACA +
Preference number: 4 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSKMGTL*GVSMAT
Trigger: TGTAGCCATAGAGACACCTCACAAGGTTCCCATTTT...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GCTGGTGGAGTGAGTCCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTAAAATGGGAACCTTGTaGGGTGTCTCTATGGCTACA +
Preference number: 4 (lower is better)
Translates to: AGGVSPRRIRGSRSWQRVKMGTL*GVSMAT
Trigger: TGTAGCCATAGAGACACCTCACAAGGTTCCCATTTT...AACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGGACTCACTCCACCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GCTGCCCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTAAAATGGGAACCTTGTaGGGTGTCTCTATGGCTACA +
Preference number: 4 (lower is better)
Translates to: AAPGSSSAAHSPKPPGHRKMGTL*GVSMAT
Trigger: TGTAGCCATAGAGACACCTCACAAGGTTCCCATTTT...ACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCGGGGGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTCTGTTGGTTCGACGGTaGCCCAAGCGAGGGGAACGT +
Preference number: 4 (lower is better)
Translates to: GCRDNGLLSAEEWRWQTPLLVRR*PKRGER
Trigger: ACGTTCCCCTCGCTTGGGTCACCGTCGAACCAACAG...AGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGGTGTCTGCAGATCCATaGTTGTGTTATCTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPVSADP*LCYLSP
Trigger: AGGCGAGAGATAACACAATCATGGATCTGCAGACAC...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGTGTCTGCAGATCCATaGTTGTGTTATCTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: QRTGGERLLCSMALCQGRVSADP*LCYLSP
Trigger: AGGCGAGAGATAACACAATCATGGATCTGCAGACAC...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp TCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAAGTGTCTGCAGATCCATaGTTGTGTTATCTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: SGHGCWQGRQPLGGVQGKVSADP*LCYLSP
Trigger: AGGCGAGAGATAACACAATCATGGATCTGCAGACAC...TTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGGTGTCTGCAGATCCATaGTTGTGTTATCTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: PRVIFCSSFSQAAWSSSKVSADP*LCYLSP
Trigger: AGGCGAGAGATAACACAATCATGGATCTGCAGACAC...CTTGGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp AGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGCCGGCTCCAGAAGGTCTTaGTGCTATTCATTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: RTGGERLLCSMALCQGRAGSRRS*CYSLKN
Trigger: GTTCTTCAATGAATAGCATCAAGACCTTCTGGAGCC...GGCTCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp CCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTTCAGCTCCTCCCATTaGGCCTCTTTCGAACTTAGT +
Preference number: 4 (lower is better)
Translates to: PVPVPDHLFRHGLACCLGFSSSH*ASFELS
Trigger: ACTAAGTTCGAAAGAGGCTCAATGGGAGGAGCTGAA...ACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000589028.5
CDS-3UTR TCA 90 bp TGGGACAGTCAAGGGCTGGTGGTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGTTCAGCTCCTCCCATTaGGCCTCTTTCGAACTTAGT +
Preference number: 4 (lower is better)
Translates to: WDSQGLVVGSSWTDGAVLFSSSH*ASFELS
Trigger: ACTAAGTTCGAAAGAGGCTCAATGGGAGGAGCTGAA...CAGCACAGCCCCATCAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000589028.5
CDS-3UTR TCA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCTGGCCAATCTCAGCCTaGAGACCAGCCGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFWPISA*RPAAFF
Trigger: AAAGAAAGCGGCTGGTCTTCAGGCTGAGATTGGCCA...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000542302.6
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp GTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCACGCCTTGCAACAGGCTaGCTTTTTCCTTCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: VRGQEVRGSSAPWLSVRARLATG*LFPSSL
Trigger: AAGACTTGAAGGAAAAAGTCAGCCTGTTGCAAGGCG...TGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTGCTGAGAGCTGTCGTTaGGATTGTCCTCCCGTCGTC +
Preference number: 4 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTAESCR*DCPPVV
Trigger: GACGACGGGAGGACAATCTCAACGACAGCTCTCAGC...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCCTGTCCTGTAGCTGCTaGGAGCTGTCGTTGAGATTG +
Preference number: 4 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFLSCSC*ELSLRL
Trigger: CAATCTCAACGACAGCTCTCAGCAGCTACAGGACAG...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp CCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTGGAATGGGAGGATTTaGAGTGGTCATCCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: PVPVPDHLFRHGLACCLGWNGRI*SGHPRS
Trigger: ACTACGAGGATGACCACTTCAAATCCTCCCATTCCA...ACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCCTAAGAGGGGCTGGATaGTCTGGTCTGGGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLLRGAG*SGLGRA
Trigger: AGCCCTCCCCAGACCAGATCATCCAGCCCCTCTTAG...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCAGGAAGCTGGTGGAGTaGGTCCACGGAGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLRKLVE*VHGGSG
Trigger: CCCTGATCCTCCGTGGACTCACTCCACCAGCTTCCT...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp TCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTTCTCTAACTCATCCTaGAGCTGCCCCCGGGTCATC +
Preference number: 4 (lower is better)
Translates to: SFSCQRTGGERLLCSMALFSNSS*SCPRVI
Trigger: GATGACCCGGGGGCAGCTTCAGGATGAGTTAGAGAA...GAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp CAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATGGTCTGCTATCTGCTaGAGAATGGCGTTGGCAAAC +
Preference number: 4 (lower is better)
Translates to: QAGLDEDSDLGRTSAPKPWSAIC*RMALAN
Trigger: GTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCA...TGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATCTTGGCTCCTGGGTTaGCTACCTCAGGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPSWLLG*LPQASP
Trigger: TGGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGA...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTTCTTGGCTCCTGGGTTaGCTACCTCAGGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTSWLLG*LPQASP
Trigger: TGGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGA...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp CGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCATCAGAGGACAGGAGGTaGGAGGCTCCTCTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: RAPVPRSSLFLAPGLTTSSEDRR*EAPLLH
Trigger: ATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGA...TGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp CAGACAGATGATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGAGCTCCCAAGCCATCGTaGGGCCTGCTCACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: QTDDIGPGNASSQKQCHRAPKPS*GLLTAP
Trigger: GGGAGCTGTGAGCAGGCCTCACGATGGCTTGGGAGC...TCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATCATCTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCGGCAATGCACGAGGCTaGGGTTCAGAGAAGACGAGT +
Preference number: 4 (lower is better)
Translates to: SFSCQRTGGERLLCSMALGNARG*GSEKTS
Trigger: ACTCGTCTTCTCTGAACCTCAGCCTCGTGCATTGCC...GAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCAACATCTCTCCCTCACTaGGAAGTGGCCTTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: QAGLDEDSDLGRTSAPKPTSLPH*EVAFSR
Trigger: CCTTGAAAAGGCCACTTCTCAGTGAGGGAGAGATGT...TGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCAGGCAAGCGGGTGACTaGGACCCCCAAACTCATGAA +
Preference number: 4 (lower is better)
Translates to: SFSCQRTGGERLLCSMALRQAGD*DPQTHE
Trigger: TTCATGAGTTTGGGGGTCTCAGTCACCCGCTTGCCT...GAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CTGCCCTACAGCACGAAGGCCACGTTTATTACTGAACTCCTAGCCAGCCTCCAGAGGCAAGCGGGTGACTaGGACCCCCAAACTCATGAA +
Preference number: 4 (lower is better)
Translates to: LPYSTKATFITELLASLQRQAGD*DPQTHE
Trigger: TTCATGAGTTTGGGGGTCTCAGTCACCCGCTTGCCT...CTGGAGGCTGGCTAGGAGTTCAGTAATAAACGTGGCCTTCGTGCTGTAGGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GTGCTGCCCTCAGGATGTGTAGCTGCAGTAGATGGATGCAATACTGGCGTGGTGAGGCAAGCGGGTGACTaGGACCCCCAAACTCATGAA +
Preference number: 4 (lower is better)
Translates to: VLPSGCVAAVDGCNTGVVRQAGD*DPQTHE
Trigger: TTCATGAGTTTGGGGGTCTCAGTCACCCGCTTGCCT...CACCACGCCAGTATTGCATCCATCTACTGCAGCTACACATCCTGAGGGCAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCTGGCCTCGAACTCCTaGTCTCAGGTGATCCGCCTG +
Preference number: 4 (lower is better)
Translates to: GPLEASSQPVELQVHSWFLASNS*SQVIRL
Trigger: CAGGCGGATCACCTGAGATCAGGAGTTCGAGGCCAG...AAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TGGGACAGTCAAGGGCTGGTGGTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGTCAATGGACAGAAATTaGGGGGCAAGTCACAATGCC +
Preference number: 4 (lower is better)
Translates to: WDSQGLVVGSSWTDGAVLSMDRN*GASHNA
Trigger: GGCATTGTGACTTGCCCCTCAATTTCTGTCCATTGA...CAGCACAGCCCCATCAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGCACTCTGGGGGTGGGTaGGCCCGCAAGTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: RDANTPAFQCWELSTWFTHSGGG*ARKFLM
Trigger: CATGAGGAACTTGCGGGCTCACCCACCCCCAGAGTG...CGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TCCAGCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCACTCTGGGGGTGGGTaGGCCCGCAAGTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: SSRYVSQNPLHLSLTEKWHSGGG*ARKFLM
Trigger: CATGAGGAACTTGCGGGCTCACCCACCCCCAGAGTG...CCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTGTTGCCTCACAACCCTaGCCCTCAATAGCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LVHWRHPLSLLNSKSIPGVASQP*PSIAEG
Trigger: TCCCTCCGCTATTGAGGGTCAGGGTTGTGAGGCAAC...ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CTTCCTCCTCAGTTCCGAACCCAGGCAGGTGAAGAGGAGGCCAGGAGCAGATGTTTTTGGGGTGACACATaGTGGTTGCCTCACAACCCT +
Preference number: 4 (lower is better)
Translates to: LPPQFRTQAGEEEARSRCFWGDT*WLPHNP
Trigger: AGGGTTGTGAGGCAACCATCATGTGTCACCCCAAAA...ACATCTGCTCCTGGCCTCCTCTTCACCTGCCTGGGTTCGGAACTGAGGAGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTAGGGTCCGCTGGGCTTaGGAAATGCCATGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTRVRWA*EMPCGV
Trigger: GACACCACATGGCATTTCTCAAGCCCAGCGGACCCT...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGAGGGTCCGCTGGGCTTaGGAAATGCCATGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLRVRWA*EMPCGV
Trigger: GACACCACATGGCATTTCTCAAGCCCAGCGGACCCT...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCACTTGCCTTGAGGTaGGACTTTCCAACTCAGCTA +
Preference number: 4 (lower is better)
Translates to: PVPVPDHLFRHGLACCLGSLALR*DFPTQL
Trigger: TAGCTGAGTTGGAAAGTCTCACCTCAAGGCAAGTGA...ACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440394.7
CDS-3UTR GCA 90 bp GCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGGCTGCCGCTACTGCTaGTGCTGCCGCCCAGGCACC +
Preference number: 4 (lower is better)
Translates to: AVLQRDSTLYLPWTSRRLGCRYC*CCRPGT
Trigger: GGTGCCTGGGCGGCAGCAGCAGCAGTAGCGGCAGCC...TAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000360905.9
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
CDS-3UTR GCA 90 bp CTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACCAGGGCTGCCGCTACTaGTGCTGCTGCCGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LSTWFTGTAMNRIEVTDHQGCRY*CCCRPG
Trigger: GCCTGGGCGGCAGCAGCAGCAGTAGCGGCAGCCCTG...GTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360905.9
ENST00000440394.7
ENST00000543086.7
CDS-3UTR GCA 90 bp GCTGCCCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTGTGATGCTCTCCAAATaGTATGGTGTCACTAGCAAC +
Preference number: 4 (lower is better)
Translates to: AAPGSSSAAHSPKPPGHRVMLSK*YGVTSN
Trigger: GTTGCTAGTGACACCATAGCATTTGGAGAGCATCAC...ACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCGGGGGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp ACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCGTGAGGTACAGTGGATaGCATACTCACAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: TSGFPIKQGQEDSSRALTVRYSG*HTHRRE
Trigger: CTCCCTCCTGTGAGTATGGCATCCACTGTACCTCAC...GGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp CGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGTACGCCTGGATTGTCATCTaGATGTGCTGGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RRIRGSRSWQRVVRCPMYAWIVI*MCWFSS
Trigger: GGAGGAAAACCAGCACATGCAGATGACAATCCAGGC...GTACATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
CDS-3UTR GCA 90 bp TGGGACAGTCAAGGGCTGGTGGTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGGTTTCTAGCTTTGTCTaGAGGGCGAGTAGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: WDSQGLVVGSSWTDGAVLVSSFV*RASSSV
Trigger: CACAGAACTACTCGCCCTGCAGACAAAGCTAGAAAC...CAGCACAGCCCCATCAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGTTTCTAGCTTTGTCTaGAGGGCGAGTAGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: VRGQEVRGSSAPWLSVRAVSSFV*RASSSV
Trigger: CACAGAACTACTCGCCCTGCAGACAAAGCTAGAAAC...TGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp GCTGGTGGAGTGAGTCCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTATGGATTCTAGTTCCTaGTTTACCTTCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: AGGVSPRRIRGSRSWQRVMDSSS*FTFSMA
Trigger: GGCCATGGAGAAGGTAAAGCAGGAACTAGAATCCAT...AACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGGACTCACTCCACCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp TGGGACAGTCAAGGGCTGGTGGTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGCGATTTTGCGTCTGCTaGTTAAGCTGCTGTACCAGA +
Preference number: 4 (lower is better)
Translates to: WDSQGLVVGSSWTDGAVLRFCVC*LSCCTR
Trigger: TCTGGTACAGCAGCTTAAGCAGCAGACGCAAAATCG...CAGCACAGCCCCATCAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTTTCCTCTCACAGGGAGAGGGATTGTTTCACAGCAGGGAGTAGGGGGAGCTGGAGGGCGTTGACCACTTaGTCTAGGATGTCGGGACAA +
Preference number: 4 (lower is better)
Translates to: VSSHRERDCFTAGSRGSWRALTT*SRMSGQ
Trigger: TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCT...CCAGCTCCCCCTACTCCCTGCTGTGAAACAATCCCTCTCCCTGTGAGAGGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGCCTTGGGAGAACGAGTaGTCCCAAGCCATCGTGAGG +
Preference number: 4 (lower is better)
Translates to: VGTMVCYLLKNGVGKLLQPWENE*SQAIVR
Trigger: CCTCACGATGGCTTGGGAGCACTCGTTCTCCCAAGG...CTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000588412.5
CDS-3UTR GCA 90 bp CGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCACCTTGGGAGAACGAGTaGTCCCAAGCCATCGTGAGG +
Preference number: 4 (lower is better)
Translates to: RAPVPRSSLFLAPGLTTSPWENE*SQAIVR
Trigger: CCTCACGATGGCTTGGGAGCACTCGTTCTCCCAAGG...TGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp GAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCGGACATGCTATTTACTaGTTCAACTCCAGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: ESSWPVPVPDHLFRHGLAGHAIY*FNSSRY
Trigger: ATACCTGCTGGAGTTGAAGCAGTAAATAGCATGTCC...GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAATTCCACGAGGTACATaGAGATGTCAGGAAATGGCC +
Preference number: 4 (lower is better)
Translates to: QRTGGERLLCSMALCQGRIPRGT*RCQEMA
Trigger: GGCCATTTCCTGACATCTGCATGTACCTCGTGGAAT...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTTTCCTCTCACAGGGAGAGGGATTGTTTCACAGCAGGGAGTAGGGGGAGCTGGGGAGATGTGAGTGTCTaGTGGGTTCTGGTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: VSSHRERDCFTAGSRGSWGDVSV*WVLVVE
Trigger: CTCTACCACCAGAACCCAGCAGACACTCACATCTCC...CCAGCTCCCCCTACTCCCTGCTGTGAAACAATCCCTCTCCCTGTGAGAGGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGCTGAAAGCTACAAACTaGATCCACTCTGCCCTACAG +
Preference number: 4 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPLKATN*IHSALQ
Trigger: CTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAG...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGCTGAAAGCTACAAACTaGATCCACTCTGCCCTACAG +
Preference number: 4 (lower is better)
Translates to: PRVIFCSSFSQAAWSSSKLKATN*IHSALQ
Trigger: CTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAG...CTTGGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440394.7
CDS-3UTR GCA 90 bp GTTTCCTCTCACAGGGAGAGGGATTGTTTCACAGCAGGGAGTAGGGGGAGCTGGCTCAAGCGATTCTCCTaGCTCCTGAGTAGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: VSSHRERDCFTAGSRGSWLKRFS*LLSSWD
Trigger: ATCCCAGCTACTCAGGAGGCAGGAGAATCGCTTGAG...CCAGCTCCCCCTACTCCCTGCTGTGAAACAATCCCTCTCCCTGTGAGAGGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCTCTGCAGAGGGTGCCTaGTGCATTGCAGTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFSAEGA*CIAVSS
Trigger: AGAAGAGACTGCAATGCAGCAGGCACCCTCTGCAGA...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCGCCAGTGCTCACCCGTaGTGGGTGGTCACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFASAHP*WVVTGR
Trigger: TCTTCCAGTGACCACCCAGCACGGGTGAGCACTGGC...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTGGAGAACACCTCACACCATCTTCTTGTTAACTGGCCGAGGAACAGAGTGAGGCTGGATATCCTGCAATaGCCGGCAGGTGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VENTSHHLLVNWPRNRVRLDILQ*PAGAWA
Trigger: AGCCCAGGCACCTGCCGGGCATTGCAGGATATCCAG...CCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGGTGTTCTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGCACCACCATGGAGGCTaGTACTGTTACCAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPHHHGG*YCYQKE
Trigger: TTCCTTTTGGTAACAGTAGCAGCCTCCATGGTGGTG...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GCTGGTGGAGTGAGTCCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTTTCTGGTCTTTCACTTaGCTTGAGGTGAGACTTTCC +
Preference number: 4 (lower is better)
Translates to: AGGVSPRRIRGSRSWQRVFWSFT*LEVRLS
Trigger: GGAAAGTCTCACCTCAAGGCAAGTGAAAGACCAGAA...AACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGGACTCACTCCACCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGTACGGGCACTTCCATACATaGTTGCAAGGTCAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: RRIRGSRSWQRVVRCPMYGHFHT*LQGQER
Trigger: CCTTTCCTGACCTTGCAACCATGTATGGAAGTGCCC...GTACATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GGTGGCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGAACGCCCAGGGCTCTaGCTGCTCGGCTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: GGSSSERFDPLSTLDIKKERPGL*LLGSTF
Trigger: GAAGGTGGAGCCGAGCAGCCAGAGCCCTGGGCGTTC...CTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTGGGAACGTGGAAGCCTaGGTGAACGCCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSGNVEA*VNAQGS
Trigger: AGAGCCCTGGGCGTTCACCCAGGCTTCCACGTTCCC...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp TGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGTCCCTCCCGTACTGTTaGTTCGACGGTGACCCAAGC +
Preference number: 4 (lower is better)
Translates to: WFHSHVRGQEVRGSSAPWSLPYC*FDGDPS
Trigger: GCTTGGGTCACCGTCGAACCAACAGTACGGGAGGGA...CCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTTCCCTCCCGTACTGTTaGTTCGACGGTGACCCAAGC +
Preference number: 4 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTSLPYC*FDGDPS
Trigger: GCTTGGGTCACCGTCGAACCAACAGTACGGGAGGGA...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGTCCCTCCCGTACTGTTaGTTCGACGGTGACCCAAGC +
Preference number: 4 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLSLPYC*FDGDPS
Trigger: GCTTGGGTCACCGTCGAACCAACAGTACGGGAGGGA...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp TCTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTCCCTCCCGTACTGTTaGTTCGACGGTGACCCAAGC +
Preference number: 4 (lower is better)
Translates to: SGPLEASSQPVELQVHSWSLPYC*FDGDPS
Trigger: GCTTGGGTCACCGTCGAACCAACAGTACGGGAGGGA...CCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCGGGAGTGAGGTACAGTaGATGCCATACTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFGSEVQ*MPYSQE
Trigger: CTCCTGTGAGTATGGCATCCACTGTACCTCACTCCC...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp ACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCGAAGAAACAGCTCTTTaGCCTGCCGCTCATGCTCAG +
Preference number: 4 (lower is better)
Translates to: TSGFPIKQGQEDSSRALTEETAL*PAAHAQ
Trigger: CTGAGCATGAGCGGCAGGCCAAAGAGCTGTTTCTTC...GGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
CDS-3UTR CCA 90 bp GTTTCCTCTCACAGGGAGAGGGATTGTTTCACAGCAGGGAGTAGGGGGAGCTGGTCGGTCACTCATCTCTaGACTGGCTCTGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: VSSHRERDCFTAGSRGSWSVTHL*TGSGFQ
Trigger: TTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACCGA...CCAGCTCCCCCTACTCCCTGCTGTGAAACAATCCCTCTCCCTGTGAGAGGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGCGATCAACTTCTGCCTaGGCCTTGCTAGATTCATCT +
Preference number: 4 (lower is better)
Translates to: PRVIFCSSFSQAAWSSSKRSTSA*ALLDSS
Trigger: AGATGAATCTAGCAAGGCCCAGGCAGAAGTTGATCG...CTTGGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGCTTTACCTTCTCCATaGCCATCAGTAACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: VRGQEVRGSSAPWLSVRAALPSP*PSVTPP
Trigger: TGGAGGAGTTACTGATGGCCATGGAGAAGGTAAAGC...TGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp TTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGGGGTCTCGGTCATaGCAGAGGGTTGTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: FPIKQGQEDSSRALTTCSRGSRS*QRVVRC
Trigger: ACACCTGACAACCCTCTGCCATGACCGAGACCCCCT...AGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp TCTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGAGGGGGTCTCGGTCATaGCAGAGGGTTGTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: SGPLEASSQPVELQVHSWRGSRS*QRVVRC
Trigger: ACACCTGACAACCCTCTGCCATGACCGAGACCCCCT...CCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp TGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGAGGGGGTCTCGGTCATaGCAGAGGGTTGTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: WFHSHVRGQEVRGSSAPWRGSRS*QRVVRC
Trigger: ACACCTGACAACCCTCTGCCATGACCGAGACCCCCT...CCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp CTTCCTCCTCAGTTCCGAACCCAGGCAGGTGAAGAGGAGGCCAGGAGCAGATGTGTTATAGGAAGCTGGTaGAGTGAGTCCACGGAGGAT +
Preference number: 4 (lower is better)
Translates to: LPPQFRTQAGEEEARSRCVIGSW*SESTED
Trigger: ATCCTCCGTGGACTCACTCCACCAGCTTCCTATAAC...ACATCTGCTCCTGGCCTCCTCTTCACCTGCCTGGGTTCGGAACTGAGGAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCACAAGTTATAGGAAGCTaGTGGAGTGAGTCCACGGAG +
Preference number: 4 (lower is better)
Translates to: QAGLDEDSDLGRTSAPKPQVIGS*WSESTE
Trigger: CTCCGTGGACTCACTCCACCAGCTTCCTATAACTTG...TGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGATCTTTTCTTGGCTCCTaGGTTGACTACCTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: QRTGGERLLCSMALCQGRSFLGS*VDYLRL
Trigger: AAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGA...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp CCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGGAAGTTTGTAGTGTTTaGTGCCAAGAAGGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: PRRIRGSRSWQRVVRCPMEVCSV*CQEGSG
Trigger: CCCGGAACCTTCTTGGCACCAAACACTACAAACTTC...CATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCACTGCTGATGACCAGGTaGCAGTTCTTCAGAGAGATT +
Preference number: 4 (lower is better)
Translates to: VRGQEVRGSSAPWLSVRALLMTR*QFFREI
Trigger: AATCTCTCTGAAGAACTGCCACCTGGTCATCAGCAG...TGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp GCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGCATCTTCTTGTTAACTaGCCGAGGAACAGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: ARQAASWRCSGETSPRATHLLVN*PRNRVR
Trigger: CCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATG...CGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCGGCCTCACTCTGCAGAGGGTGCCTGCTGCATTGCAGTCTCTTCTCATCCTTCAACAGGAGAGACTGGTaGAGAACACCTCACACCATC +
Preference number: 4 (lower is better)
Translates to: AASLCRGCLLHCSLFSSFNRRDW*RTPHTI
Trigger: GATGGTGTGAGGTGTTCTCCACCAGTCTCTCCTGTT...GAAGGATGAGAAGAGACTGCAATGCAGCAGGCACCCTCTGCAGAGTGAGGCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTATAGGAAGCTGGTGGAGTGTGGTGGGAAGTTCCTaGACTGATGGGGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LILPSRLVIVQVIGSWWSVVGSS*TDGAVL
Trigger: CAGCACAGCCCCATCAGTCCAGGAACTTCCCACCAC...ACTCCACCAGCTTCCTATAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440394.7
CDS-3UTR CCA 90 bp GTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGGGGACAGTCAAGGGCTaGTGGTGGGAAGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: VGTMVCYLLKNGVGKLLQGTVKG*WWEVPG
Trigger: TCCAGGAACTTCCCACCACCAGCCCTTGACTGTCCC...CTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355446.9
ENST00000440394.7
CDS-3UTR CCA 90 bp TCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAATGGGAGCTTTCTACATaGTTTACGGGCACTGCAATG +
Preference number: 4 (lower is better)
Translates to: SGHGCWQGRQPLGGVQGKWELST*FTGTAM
Trigger: CATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCA...TTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CGGGTCATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTAGTCTTGGTTCCACCGTaGCCCCGTGAAGGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: RVIFCSSFSQAAWSSSKLVLVPP*PREGCY
Trigger: ATAACAGCCTTCACGGGGCCACGGTGGAACCAAGAC...TAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440394.7
CDS-3UTR CCA 90 bp ACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCCTTGGAGAGAGCAGCTaGCCAGTGCCCGTGCCAGAC +
Preference number: 4 (lower is better)
Translates to: TMVCYLLKNGVGKLLQFCLGESS*PVPVPD
Trigger: GTCTGGCACGGGCACTGGCCAGCTGCTCTCTCCAAG...GCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355446.9
ENST00000440394.7
CDS-3UTR CCA 90 bp TGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCCTTGGAGAGAGCAGCTaGCCAGTGCCCGTGCCAGAC +
Preference number: 4 (lower is better)
Translates to: WRHPLSLLNSKSIPGFILLGESS*PVPVPD
Trigger: GTCTGGCACGGGCACTGGCCAGCTGCTCTCTCCAAG...GAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCATGCAGTATTAGGCACACTGAGCTAGAACCCACGTCGGGTGAGGGTGGTTATCCATCTTGGCCAGGCTaGCCTCGAACTCCTGATCTC +
Preference number: 4 (lower is better)
Translates to: PCSIRHTELEPTSGEGGYPSWPG*PRTPDL
Trigger: GAGATCAGGAGTTCGAGGCCAGCCTGGCCAAGATGG...ATAACCACCCTCACCCGACGTGGGTTCTAGCTCAGTGTGCCTAATACTGCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCGGGTTTTTGCCATCTTaGCCAGGCTGGCCTCGAACT +
Preference number: 4 (lower is better)
Translates to: SFSCQRTGGERLLCSMALGFLPS*PGWPRT
Trigger: AGTTCGAGGCCAGCCTGGCCAAGATGGCAAAAACCC...GAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGCCCGCAAGTTCCTCATaGAAAACCAGACTTCAATGG +
Preference number: 4 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPPASSS*KTRLQW
Trigger: CCATTGAAGTCTGGTTTTCCATGAGGAACTTGCGGG...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGGAGGAGGGGAGTGTaGCTGCCCCATAGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLGRRGV*LPHSLN
Trigger: ATTCAAGCTATGGGGCAGCCACACTCCCCTCCTCCC...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTGCAGGCTCCAGGCTaGCCAGTGCTCACCCGTGCT +
Preference number: 4 (lower is better)
Translates to: AGMSHRIHYISPSLRSGLLQAPG*PVLTRA
Trigger: AGCACGGGTGAGCACTGGCCAGCCTGGAGCCTGCAA...AAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTGCAGGCCAGAGTGGGTaGTGCTGCCCTCAGGATGTG +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSAGQSG*CCPQDV
Trigger: CACATCCTGAGGGCAGCACCACCCACTCTGGCCTGC...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TTCCTTGCTGTTCACAGAGACCAGACAGATGATATCGGTCCCGGAAATGCTTCTGGGCTAGTCCTGCGATaGGCCAGCAGGCCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: FLAVHRDQTDDIGPGNASGLVLR*ASRPEW
Trigger: CCACTCTGGCCTGCTGGCCCATCGCAGGACTAGCCC...AGAAGCATTTCCGGGACCGATATCATCTGTCTGGTCTCTGTGAACAGCAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCTGCCCGGCAGGTGCCTaGGCTAGTCCTGCGATGGGC +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGCPAGA*ASPAMG
Trigger: GCCCATCGCAGGACTAGCCCAGGCACCTGCCGGGCA...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAAAAATGGGAACCTTGTaGGGTGTCTCTATGGCTACA +
Preference number: 4 (lower is better)
Translates to: QRTGGERLLCSMALCQGRKMGTL*GVSMAT
Trigger: TGTAGCCATAGAGACACCTCACAAGGTTCCCATTTT...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp TCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCCTCACAGGAGGGAGGTaGTGCTCTCCAAATGCTATG +
Preference number: 4 (lower is better)
Translates to: SFSCQRTGGERLLCSMALLTGGR*CSPNAM
Trigger: CATAGCATTTGGAGAGCATCACCTCCCTCCTGTGAG...GAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGGCTCCAGAAGGTCTTaGTGCTATTCATTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: QRTGGERLLCSMALCQGRGSRRS*CYSLKN
Trigger: GTTCTTCAATGAATAGCATCAAGACCTTCTGGAGCC...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCGTGCTGTTTACTATCTaGGAACTGGTTTGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSVLFTI*ELVCEC
Trigger: ACACTCACAAACCAGTTCTCAGATAGTAAACAGCAC...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGCAGCCTGCAAGGATTTaGCCCGTTCTTTCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: KQGQEDSSRALTTCSRMSQPARI*PVLSSC
Trigger: GCAGCTTGAAAGAACGGGTCAAATCCTTGCAGGCTG...CGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GCGGCCTCACTCTGCAGAGGGTGCCTGCTGCATTGCAGTCTCTTCTCATCCTTCCATCTTTGTACCTGGTaGTCTCTCTCTCCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: AASLCRGCLLHCSLFSSFHLCTW*SLSPSA
Trigger: AGCACTTGGAGAGAGAGATCACCAGGTACAAAGATG...GAAGGATGAGAAGAGACTGCAATGCAGCAGGCACCCTCTGCAGAGTGAGGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGCCCGAAGATTAGTCAAGTaGGTTTCCTTTTCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: RTGGERLLCSMALCQGRARRLVK*VSFSAR
Trigger: TCTGGCAGAAAAGGAAACTCACTTGACTAATCTTCG...GGCTCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp GCGGCCTCACTCTGCAGAGGGTGCCTGCTGCATTGCAGTCTCTTCTCATCCTTCTGGAATGGGAGGATTTaGAGTGGTCATCCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: AASLCRGCLLHCSLFSSFWNGRI*SGHPRS
Trigger: ACTACGAGGATGACCACTTCAAATCCTCCCATTCCA...GAAGGATGAGAAGAGACTGCAATGCAGCAGGCACCCTCTGCAGAGTGAGGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGTACTGGAATGGGAGGATTTaGAGTGGTCATCCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: RRIRGSRSWQRVVRCPMYWNGRI*SGHPRS
Trigger: ACTACGAGGATGACCACTTCAAATCCTCCCATTCCA...GTACATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp ATGAGACACTCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGCTAAGAGGGGCTGGATaGTCTGGTCTGGGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: MRHSESYKLHPLCPTARRLRGAG*SGLGRA
Trigger: AGCCCTCCCCAGACCAGATCATCCAGCCCCTCTTAG...CCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGAGTGTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TATGCTAGAAGAAGGTTCCAGGCAATGCACGAGGCTGAGGTTCAGAGAAGACGAAGGAAGCTGGTGGAGTaGGTCCACGGAGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: YARRRFQAMHEAEVQRRRRKLVE*VHGGSG
Trigger: CCCTGATCCTCCGTGGACTCACTCCACCAGCTTCCT...TCGTCTTCTCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTCTTCTAGCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTAGGAAGCTGGTGGAGTaGGTCCACGGAGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: AGMSHRIHYISPSLRSGLRKLVE*VHGGSG
Trigger: CCCTGATCCTCCGTGGACTCACTCCACCAGCTTCCT...AAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTAGGAAGCTGGTGGAGTaGGTCCACGGAGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSRKLVE*VHGGSG
Trigger: CCCTGATCCTCCGTGGACTCACTCCACCAGCTTCCT...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGTTCTCTAACTCATCCTaGAGCTGCCCCCGGGTCATC +
Preference number: 4 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLFSNSS*SCPRVI
Trigger: GATGACCCGGGGGCAGCTTCAGGATGAGTTAGAGAA...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATTCTCTAACTCATCCTaGAGCTGCCCCCGGGTCATC +
Preference number: 4 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPFSNSS*SCPRVI
Trigger: GATGACCCGGGGGCAGCTTCAGGATGAGTTAGAGAA...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp TTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTTTCTCTAACTCATCCTaGAGCTGCCCCCGGGTCATC +
Preference number: 4 (lower is better)
Translates to: FPIKQGQEDSSRALTTCSFSNSS*SCPRVI
Trigger: GATGACCCGGGGGCAGCTTCAGGATGAGTTAGAGAA...AGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp TCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCACTCTTCCAGGGCGTTaGCCACTTGCTCTAGGATGT +
Preference number: 4 (lower is better)
Translates to: SFSCQRTGGERLLCSMALTLPGR*PLALGC
Trigger: ACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGT...GAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp GTTCTGCATTGTCCCGTTCACCTTTCTCTAACTCATCCTGAAGCTGCCCCCGGGACTCTTCCAGGGCGTTaGCCACTTGCTCTAGGATGT +
Preference number: 4 (lower is better)
Translates to: VLHCPVHLSLTHPEAAPGTLPGR*PLALGC
Trigger: ACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGT...CCCGGGGGCAGCTTCAGGATGAGTTAGAGAAAGGTGAACGGGACAATGCAGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCTCTTGGCTCCTGGGTTaGCTACCTCAGGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFSWLLG*LPQASP
Trigger: TGGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGA...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp TGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCATCTTGGCTCCTGGGTTaGCTACCTCAGGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: CRDNGLLSAEEWRWQTPASWLLG*LPQASP
Trigger: TGGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGA...TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp AGGGTCACGCTATGTTGCCCTGGCTGGTGCTCTTTCAACCTCACATGTTCTTCATCTTGGCTCCTGGGTTaGCTACCTCAGGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: RVTLCCPGWCSFNLTCSSSWLLG*LPQASP
Trigger: TGGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGA...TGAAGAACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACATAGCGTGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp GCTGGTGGAGTGAGTCCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTTCACACTTCTTCAAGTaGGCAAGTTGGGATGAAGTT +
Preference number: 4 (lower is better)
Translates to: AGGVSPRRIRGSRSWQRVSHFFK*ASWDEV
Trigger: AACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGA...AACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGGACTCACTCCACCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTGGCCGAGGAACAGAGTaGGGAAGGCTGCGACAGACA +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSGRGTE*GRLRQT
Trigger: TGTCTGTCGCAGCCTTCCTCACTCTGTTCCTCGGCC...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp GAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGGCCGAGGAACAGAGTaGGGAAGGCTGCGACAGACA +
Preference number: 4 (lower is better)
Translates to: EMLTLLPFSAGSFLHGLRGRGTE*GRLRQT
Trigger: TGTCTGTCGCAGCCTTCCTCACTCTGTTCCTCGGCC...CCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCGCAAAGCTAGCAGGGTaGGTGAGGGATCACAACTTC +
Preference number: 4 (lower is better)
Translates to: SFSCQRTGGERLLCSMALAKLAG*VRDHNF
Trigger: GAAGTTGTGATCCCTCACTCACCCTGCTAGCTTTGC...GAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTGGCAATGCACGAGGCTaGGGTTCAGAGAAGACGAGT +
Preference number: 4 (lower is better)
Translates to: LVHWRHPLSLLNSKSIPGGNARG*GSEKTS
Trigger: ACTCGTCTTCTCTGAACCTCAGCCTCGTGCATTGCC...ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCATGCAGTATTAGGCACACTGAGCTAGAACCCACGTCGGGTGAGGGTGGTTATGGCAATGCACGAGGCTaGGGTTCAGAGAAGACGAGT +
Preference number: 4 (lower is better)
Translates to: PCSIRHTELEPTSGEGGYGNARG*GSEKTS
Trigger: ACTCGTCTTCTCTGAACCTCAGCCTCGTGCATTGCC...ATAACCACCCTCACCCGACGTGGGTTCTAGCTCAGTGTGCCTAATACTGCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGCAATGCACGAGGCTaGGGTTCAGAGAAGACGAGT +
Preference number: 4 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLGNARG*GSEKTS
Trigger: ACTCGTCTTCTCTGAACCTCAGCCTCGTGCATTGCC...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAGACCCCCAAACTCATaGATTCCATTAGGGAACTTT +
Preference number: 4 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSRPPNS*IPLGNF
Trigger: AAAGTTCCCTAATGGAATTCATGAGTTTGGGGGTCT...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTAGGCAAGCGGGTGACTaGGACCCCCAAACTCATGAA +
Preference number: 4 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTRQAGD*DPQTHE
Trigger: TTCATGAGTTTGGGGGTCTCAGTCACCCGCTTGCCT...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp ACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCTCTTATCAGGAGATGTaGGTGTCTGCTGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: TSGFPIKQGQEDSSRALTSYQEM*VSAGFW
Trigger: CCAGAACCCAGCAGACACTCACATCTCCTGATAAGA...GGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355446.9
ENST00000440394.7
CDS-3UTR TCA 90 bp GTTTCCTCTCACAGGGAGAGGGATTGTTTCACAGCAGGGAGTAGGGGGAGCTGGGGGGAGCTGGAAATCTaGCCATGTCAGTTAATGGGA +
Preference number: 4 (lower is better)
Translates to: VSSHRERDCFTAGSRGSWGELEI*PCQLMG
Trigger: TCCCATTAACTGACATGGTCAGATTTCCAGCTCCCC...CCAGCTCCCCCTACTCCCTGCTGTGAAACAATCCCTCTCCCTGTGAGAGGAAAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGACTCTACAGACTTTAAATTCTTCCACCGTGGCCCCGTaGAGGCTGTTATCACACCGC +
Preference number: 4 (lower is better)
Translates to: VGSSWTDGAVLTLQTLNSSTVAP*RLLSHR
Trigger: GCGGTGTGATAACAGCCTTCACGGGGCCACGGTGGA...AGAATTTAAAGTCTGTAGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GCTACGTCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCGACACACCCAGTGGCTaGGAGTGGCAGGCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: ATSLTMPIPSLICSLGVSDTPSG*EWQALH
Trigger: GTGCAGCGCCTGCCACTCTCAGCCACTGGGTGTGTC...GCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGACGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGGGACAAGTGCCCTCTTTATGGTaGCATTGGTTTGGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GQEDSSRALTTCSRMSGQVPSLW*HWFGVQ
Trigger: CTGCACCCCAAACCAATGTCACCATAAAGAGGGCAC...TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440394.7
CDS-3UTR TCA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGATCATCAATGATTCAATaGGTACCGGGGGTTAGAGGT +
Preference number: 4 (lower is better)
Translates to: QRTGGERLLCSMALCQGRSSMIQ*VPGVRG
Trigger: ACCTCTAACCCCCGGTACTCATTGAATCATTGATGA...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AAACCCCGTTGGGATCACACCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTCTGGCCTCGAACTCCTaGTCTCAGGTGATCCGCCTG +
Preference number: 4 (lower is better)
Translates to: KPRWDHTHSSSCPLYGDILASNS*SQVIRL
Trigger: CAGGCGGATCACCTGAGATCAGGAGTTCGAGGCCAG...AATGTCACCATAAAGAGGGCACGAAGAAGAGTGGGTGTGATCCCAACGGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGGATTCTCCTGCCTCCTaGGTAGCTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: VGTMVCYLLKNGVGKLLQDSPAS*VAGITG
Trigger: GCCTGTAATCCCAGCTACTCAGGAGGCAGGAGAATC...CTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440394.7
CDS-3UTR TCA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGATTCTCCTGCCTCCTaGGTAGCTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLDSPAS*VAGITG
Trigger: GCCTGTAATCCCAGCTACTCAGGAGGCAGGAGAATC...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GCGGCCTCACTCTGCAGAGGGTGCCTGCTGCATTGCAGTCTCTTCTCATCCTTCTCTAAAACCCAAGTGTaGGGAAGTCTGAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: AASLCRGCLLHCSLFSSFSKTQV*GSLRAT
Trigger: TGTGGCTCTCAGACTTCCTCACACTTGGGTTTTAGA...GAAGGATGAGAAGAGACTGCAATGCAGCAGGCACCCTCTGCAGAGTGAGGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGGGTCACGCTATGTTGCCCTGGCTGGTGCTCTTTCAACCTCACATGTTCTTCAAGGGTCCGCTGGGCTTaGGAAATGCCATGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: RVTLCCPGWCSFNLTCSSRVRWA*EMPCGV
Trigger: GACACCACATGGCATTTCTCAAGCCCAGCGGACCCT...TGAAGAACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACATAGCGTGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAACTGCCCCAATTCTCTaGATCACACAGACAATATCG +
Preference number: 4 (lower is better)
Translates to: QRTGGERLLCSMALCQGRTAPIL*ITQTIS
Trigger: CGATATTGTCTGTGTGATTCAGAGAATTGGGGCAGT...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCATCTACCCAGAGGTCCTaGACATGTATAGGAAAATCC +
Preference number: 4 (lower is better)
Translates to: VRGQEVRGSSAPWLSVRASTQRS*TCIGKS
Trigger: GGATTTTCCTATACATGTTCAGGACCTCTGGGTAGA...TGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATGAAGCCAGAAGGAACTaGCATGGAGGACAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: RQGWMKTQTLGERVLPSHEARRN*HGGQSV
Trigger: AACAGACTGTCCTCCATGTCAGTTCCTTCTGGCTTC...ATGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CTAACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGTGGCGTGGTGTGGAATaGGGGGCTGGACCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LTPQYDNVNSLKQERLVEWRGVE*GAGPRG
Trigger: CCCTCTGGGTCCAGCCCCTCATTCCACACCACGCCA...CTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCACACACACATACAGCTaGAGGCAGCGGGTGCACGTG +
Preference number: 4 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLTHTYS*RQRVHV
Trigger: CACGTGCACCCGCTGCCTTCAGCTGTATGTGTGTGT...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTAACTCATGCCACCTCCAACACTaGTTCCCGAACTCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: ALANSCSSALSRSPFSNSCHLQH*FPNSLP
Trigger: CGGGAGGGAGTTCGGGAAGCAGTGTTGGAGGTGGCA...TGAGTTAGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp ACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCTGCCACCTCCAACACTaGTTCCCGAACTCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: TMVCYLLKNGVGKLLQFCCHLQH*FPNSLP
Trigger: CGGGAGGGAGTTCGGGAAGCAGTGTTGGAGGTGGCA...GCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGGTGATGCTCTCCAAATaGTATGGTGTCACTAGCAAC +
Preference number: 4 (lower is better)
Translates to: ARQAASWRCSGETSPRATVMLSK*YGVTSN
Trigger: GTTGCTAGTGACACCATAGCATTTGGAGAGCATCAC...CGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGGTGAGGTACAGTGGATaGCATACTCACAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LTTSGFPIKQGQEDSSRAVRYSG*HTHRRE
Trigger: CTCCCTCCTGTGAGTATGGCATCCACTGTACCTCAC...CGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GTGCTGCCCTCAGGATGTGTAGCTGCAGTAGATGGATGCAATACTGGCGTGGTGGTGAGGTACAGTGGATaGCATACTCACAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: VLPSGCVAAVDGCNTGVVVRYSG*HTHRRE
Trigger: CTCCCTCCTGTGAGTATGGCATCCACTGTACCTCAC...CACCACGCCAGTATTGCATCCATCTACTGCAGCTACACATCCTGAGGGCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTTTCCTCTCACAGGGAGAGGGATTGTTTCACAGCAGGGAGTAGGGGGAGCTGGGCCTGGATTGTCATCTaGATGTGCTGGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VSSHRERDCFTAGSRGSWAWIVI*MCWFSS
Trigger: GGAGGAAAACCAGCACATGCAGATGACAATCCAGGC...CCAGCTCCCCCTACTCCCTGCTGTGAAACAATCCCTCTCCCTGTGAGAGGAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGCTCCTCTGTCAGCTCTaGTACACAAGGTTCGCCAGT +
Preference number: 4 (lower is better)
Translates to: LTTSGFPIKQGQEDSSRALLCQL*YTRFAS
Trigger: ACTGGCGAACCTTGTGTAGCAGAGCTGACAGAGGAG...CGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
CDS-3UTR GCA 90 bp GTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCCTCCTCTGTCAGCTCTaGTACACAAGGTTCGCCAGT +
Preference number: 4 (lower is better)
Translates to: VDYLRLPHKAGSRGLFQGLLCQL*YTRFAS
Trigger: ACTGGCGAACCTTGTGTAGCAGAGCTGACAGAGGAG...GCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
CDS-3UTR GCA 90 bp TCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCCTCCTCTGTCAGCTCTaGTACACAAGGTTCGCCAGT +
Preference number: 4 (lower is better)
Translates to: SFSCQRTGGERLLCSMALLLCQL*YTRFAS
Trigger: ACTGGCGAACCTTGTGTAGCAGAGCTGACAGAGGAG...GAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp CTTCCTCCTCAGTTCCGAACCCAGGCAGGTGAAGAGGAGGCCAGGAGCAGATGTGTTTCTAGCTTTGTCTaGAGGGCGAGTAGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: LPPQFRTQAGEEEARSRCVSSFV*RASSSV
Trigger: CACAGAACTACTCGCCCTGCAGACAAAGCTAGAAAC...ACATCTGCTCCTGGCCTCCTCTTCACCTGCCTGGGTTCGGAACTGAGGAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGGGACAATGTCCGCTCTTTCTCTaGAAGGGCCTCCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: GQEDSSRALTTCSRMSGQCPLFL*KGLLQS
Trigger: ACTTTGGAGGAGGCCCTTGCAGAGAAAGAGCGGACA...TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GTCTTGGTTCCACCGTGGCCCCGTGAAGGCTGTTATCACACCGCAGTTCTTTACTGTCCGCTCTTTCTCTaGAAGGGCCTCCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: VLVPPWPREGCYHTAVLYCPLFL*KGLLQS
Trigger: ACTTTGGAGGAGGCCCTTGCAGAGAAAGAGCGGACA...GTAAAGAACTGCGGTGTGATAACAGCCTTCACGGGGCCACGGTGGAACCAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCTGTCCGCTCTTTCTCTaGAAGGGCCTCCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: VDYLRLPHKAGSRGLFQGCPLFL*KGLLQS
Trigger: ACTTTGGAGGAGGCCCTTGCAGAGAAAGAGCGGACA...GCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp CCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGTCTGGCTTCCAATGCTaGCTCATGTGCCTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: PRRIRGSRSWQRVVRCPMSGFQC*LMCLFQ
Trigger: TTGAAAAAGGCACATGAGGCAGCATTGGAAGCCAGA...CATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp ACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCGGCTCTGGCTTCCAATaGTGCCTCATGTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: TSGFPIKQGQEDSSRALTGSGFQ*CLMCLF
Trigger: AAAAAGGCACATGAGGCAGCATTGGAAGCCAGAGCC...GGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCTTTTCTGCCAGAGACTaGTGGGTGGAGGACAGCTTT +
Preference number: 4 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFFSARD*WVEDSF
Trigger: AAAGCTGTCCTCCACCCAGCAGTCTCTGGCAGAAAA...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp GGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGTACATTTTCTGCCAGAGACTaGTGGGTGGAGGACAGCTTT +
Preference number: 4 (lower is better)
Translates to: GGSGGLGHGRGLSGVQCTFSARD*WVEDSF
Trigger: AAAGCTGTCCTCCACCCAGCAGTCTCTGGCAGAAAA...TGTACATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp TGCGACAGACAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTGTCTGCTGCTTAAGCTaGTGTACCAGACGATCCTTC +
Preference number: 4 (lower is better)
Translates to: CDRQAGLDEDSDLGRTSAVCCLS*CTRRSF
Trigger: GAAGGATCGTCTGGTACAGCAGCTTAAGCAGCAGAC...AGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTGTCTGTCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp CCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGAAACTCCTGCAGTTCTaGATTGTCCCGTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: PRVIFCSSFSQAAWSSSKKLLQF*IVPFTF
Trigger: AAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTT...CTTGGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGGGACAAAGGGCGTTGACCACTTaGTCTAGGATGTCGGGACAA +
Preference number: 4 (lower is better)
Translates to: GQEDSSRALTTCSRMSGQRALTT*SRMSGQ
Trigger: TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCT...TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GTGCTGCCCTCAGGATGTGTAGCTGCAGTAGATGGATGCAATACTGGCGTGGTGAGGGCGTTGACCACTTaGTCTAGGATGTCGGGACAA +
Preference number: 4 (lower is better)
Translates to: VLPSGCVAAVDGCNTGVVRALTT*SRMSGQ
Trigger: TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCT...CACCACGCCAGTATTGCATCCATCTACTGCAGCTACACATCCTGAGGGCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATGTTTGTAGTGTTTGGTaGCAAGAAGGTTCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: RQGWMKTQTLGERVLPSHVCSVW*QEGSGH
Trigger: GTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC...ATGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp GCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTAGCCATCGTGAGGCCTaGTCACAGCTCCCCGGTACA +
Preference number: 4 (lower is better)
Translates to: AGMSHRIHYISPSLRSGLSHREA*SQLPGT
Trigger: TGTACCGGGGAGCTGTGAGCAGGCCTCACGATGGCT...AAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACCCTTGGGAGAACGAGTaGTCCCAAGCCATCGTGAGG +
Preference number: 4 (lower is better)
Translates to: PAFQCWELSTWFTGTAMNPWENE*SQAIVR
Trigger: CCTCACGATGGCTTGGGAGCACTCGTTCTCCCAAGG...GTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GCTGGTGGAGTGAGTCCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGGACATGCTATTTACTaGTTCAACTCCAGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: AGGVSPRRIRGSRSWQRVGHAIY*FNSSRY
Trigger: ATACCTGCTGGAGTTGAAGCAGTAAATAGCATGTCC...AACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGGACTCACTCCACCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347735.10
ENST00000440394.7
CDS-3UTR GCA 90 bp GAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTAAGGCATGGCCTCGCCTaGTGTCTTGGTTCCACCGTG +
Preference number: 4 (lower is better)
Translates to: EWRWQTPAVLHCPVHLSLRHGLA*CLGSTV
Trigger: CACGGTGGAACCAAGACAGCAGGCGAGGCCATGCCT...TAGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355446.9
ENST00000440394.7
CDS-3UTR GCA 90 bp TCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGCCACGTTTAAGGCATGGCCTCGCCTaGTGTCTTGGTTCCACCGTG +
Preference number: 4 (lower is better)
Translates to: SESYKLHPLCPTARRPRLRHGLA*CLGSTV
Trigger: CACGGTGGAACCAAGACAGCAGGCGAGGCCATGCCT...TAAACGTGGCCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp ATAAAGCGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGGGGATCTGGGCCACCTaGTTGGAGAGAGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: IKRDANTPAFQCWELSTWGIWAT*LERAAG
Trigger: GCCAGCTGCTCTCTCCAAGCAGGTGGCCCAGATCCC...CCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCGCTTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTGCACGTGCATCCCAGACACCACCATGGAGGCTGCTACTGTTACCAAAAGGAACTAGCCAGCCTCCAGTaGCCAAGAACGGTCAAGAAG +
Preference number: 4 (lower is better)
Translates to: VHVHPRHHHGGCYCYQKELASLQ*PRTVKK
Trigger: CTTCTTGACCGTTCTTGGGCACTGGAGGCTGGCTAG...TTCCTTTTGGTAACAGTAGCAGCCTCCATGGTGGTGTCTGGGATGCACGTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTGCTGCCCTCAGGATGTGTAGCTGCAGTAGATGGATGCAATACTGGCGTGGTGGCAGAGGGTGCCTGCTaGATTGCAGTCTCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: VLPSGCVAAVDGCNTGVVAEGAC*IAVSSH
Trigger: ATGAGAAGAGACTGCAATGCAGCAGGCACCCTCTGC...CACCACGCCAGTATTGCATCCATCTACTGCAGCTACACATCCTGAGGGCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATCGCCCAGGGCCACCTATaGCAGCCTGGGAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: KAPIVILEHSALWSIGGIAQGHL*QPGRRG
Trigger: TCCCCTCCTCCCAGGCTGGCATAGGTGGCCCTGGGC...GATGCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTCGGCAGGTGTCTCTTaGCCAGGCAGGCACTACCCT +
Preference number: 4 (lower is better)
Translates to: AGMSHRIHYISPSLRSGLSAGVS*PGRHYP
Trigger: AGGGTAGTGCCTGCCTGGGCAAGAGACACCTGCCGA...AAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTGCCAGTGCTCACCCGTaGTGGGTGGTCACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSASAHP*WVVTGR
Trigger: TCTTCCAGTGACCACCCAGCACGGGTGAGCACTGGC...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTTCTGCATTGTCCCGTTCACCTTTCTCTAACTCATCCTGAAGCTGCCCCCGGGGCCTCTGATTGGCTATaGCCATATACCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: VLHCPVHLSLTHPEAAPGASDWL*PYTLLL
Trigger: GAGGAGGAGGGTATATGGGCATAGCCAATCAGAGGC...CCCGGGGGCAGCTTCAGGATGAGTTAGAGAAAGGTGAACGGGACAATGCAGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp AGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGGAACGCCCAGGGCTCTaGCTGCTCGGCTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: RQSKMADVETVLESHFFKERPGL*LLGSTF
Trigger: GAAGGTGGAGCCGAGCAGCCAGAGCCCTGGGCGTTC...CTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp GGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGGGACAAGGGAGTGAGGTACAGTaGATGCCATACTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: GQEDSSRALTTCSRMSGQGSEVQ*MPYSQE
Trigger: CTCCTGTGAGTATGGCATCCACTGTACCTCACTCCC...TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGGTCATCTGCATGTGCTaGTTTTCCTCCTGTACAACT +
Preference number: 4 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPVICMC*FSSCTT
Trigger: AGTTGTACAGGAGGAAAACCAGCACATGCAGATGAC...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCACTGGGCTGCAGGAGCTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTTTACTATCTGAGAACTaGTTTGTGAGTGTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: PLGCRSSGHGCWQGRQPLLLSEN*FVSVSS
Trigger: GCTAGAAACACTCACAAACCAGTTCTCAGATAGTAA...AAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGCCCAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGCACTCATCTCTGGACTaGCTCTGGCTTCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: LTTSGFPIKQGQEDSSRAHSSLD*LWLPML
Trigger: CAGCATTGGAAGCCAGAGCCAGTCCAGAGATGAGTG...CGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCACGATCAACTTCTGCCTaGGCCTTGCTAGATTCATCT +
Preference number: 4 (lower is better)
Translates to: QAGLDEDSDLGRTSAPKPRSTSA*ALLDSS
Trigger: AGATGAATCTAGCAAGGCCCAGGCAGAAGTTGATCG...TGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp CCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTTCAGCATTGGTCCTaGCTGATTCCTCTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: PRVIFCSSFSQAAWSSSKFQHWS*LIPLVL
Trigger: TAGCACAAGAGGAATCAGCCAGGACCAATGCTGAAA...CTTGGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000440394.7
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp TTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTTCTGCCAGAGACTGCTaGGTGGAGGACAGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: FPIKQGQEDSSRALTTCSSARDC*VEDSFA
Trigger: AGCAAAGCTGTCCTCCACCCAGCAGTCTCTGGCAGA...AGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTATAGGAAGCTGGTGGAGTTCTGCCAGAGACTGCTaGGTGGAGGACAGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: LILPSRLVIVQVIGSWWSSARDC*VEDSFA
Trigger: AGCAAAGCTGTCCTCCACCCAGCAGTCTCTGGCAGA...ACTCCACCAGCTTCCTATAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp AGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATCTGGATGATCTGGTCTaGGGAGGGCTTGTGATTTGT +
Preference number: 4 (lower is better)
Translates to: RQGWMKTQTLGERVLPSHLDDLV*GGLVIC
Trigger: ACAAATCACAAGCCCTCCCCAGACCAGATCATCCAG...ATGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGGTCACGCTATGTTGCCCTGGCTGGTGCTCTTTCAACCTCACATGTTCTTCAAGGGGGTCTCGGTCATaGCAGAGGGTTGTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: RVTLCCPGWCSFNLTCSSRGSRS*QRVVRC
Trigger: ACACCTGACAACCCTCTGCCATGACCGAGACCCCCT...TGAAGAACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACATAGCGTGACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp ACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCGTTATAGGAAGCTGGTaGAGTGAGTCCACGGAGGAT +
Preference number: 4 (lower is better)
Translates to: TSGFPIKQGQEDSSRALTVIGSW*SESTED
Trigger: ATCCTCCGTGGACTCACTCCACCAGCTTCCTATAAC...GGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GGAGAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCACCCTTTATCTACCCTaGACATCAAGAAGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: GESSWPVPVPDHLFRHGLTLYLP*TSRRLV
Trigger: CACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGT...GAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTAGCTCTCTGGTCCATTaGAGGCATCCTCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LVHWRHPLSLLNSKSIPGSSLVH*RHPLSL
Trigger: CAGGCTGAGAGGATGCCTCCAATGGACCAGAGAGCT...ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp TGCGACAGACAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTAACAGGAGAGACTGGTaGAGAACACCTCACACCATC +
Preference number: 4 (lower is better)
Translates to: CDRQAGLDEDSDLGRTSANRRDW*RTPHTI
Trigger: GATGGTGTGAGGTGTTCTCCACCAGTCTCTCCTGTT...AGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTGTCTGTCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp TCCAGCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGACGGGCATCTGTTACTaGGGCAAAGCTGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: SSRYVSQNPLHLSLTEKWTGICY*GKAAGG
Trigger: CCCGCCTGCAGCTTTGCCCCAGTAACAGATGCCCGT...CCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCACGGGCATCTGTTACTaGGGCAAAGCTGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: WRHPLSLLNSKSIPGFILTGICY*GKAAGG
Trigger: CCCGCCTGCAGCTTTGCCCCAGTAACAGATGCCCGT...GAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTACGGGCATCTGTTACTaGGGCAAAGCTGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVTGICY*GKAAGG
Trigger: CCCGCCTGCAGCTTTGCCCCAGTAACAGATGCCCGT...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCGGGACAGTCAAGGGCTaGTGGTGGGAAGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLGTVKG*WWEVPG
Trigger: TCCAGGAACTTCCCACCACCAGCCCTTGACTGTCCC...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCATGCAGTATTAGGCACACTGAGCTAGAACCCACGTCGGGTGAGGGTGGTTATGTCTTGGTTCCACCGTaGCCCCGTGAAGGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: PCSIRHTELEPTSGEGGYVLVPP*PREGCY
Trigger: ATAACAGCCTTCACGGGGCCACGGTGGAACCAAGAC...ATAACCACCCTCACCCGACGTGGGTTCTAGCTCAGTGTGCCTAATACTGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGGTCTTGGTTCCACCGTaGCCCCGTGAAGGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: SGPLEASSQPVELQVHSWVLVPP*PREGCY
Trigger: ATAACAGCCTTCACGGGGCCACGGTGGAACCAAGAC...CCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CAGACAGATGATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGACTTGGAGAGAGCAGCTaGCCAGTGCCCGTGCCAGAC +
Preference number: 4 (lower is better)
Translates to: QTDDIGPGNASSQKQCHRLGESS*PVPVPD
Trigger: GTCTGGCACGGGCACTGGCCAGCTGCTCTCTCCAAG...TCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATCATCTGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CTTGGGGTCAGCTTTCTGATTTGCAACATGAAGCTGGCTGAATTCCACGAGGTACTTGGAGAGAGCAGCTaGCCAGTGCCCGTGCCAGAC +
Preference number: 4 (lower is better)
Translates to: LGVSFLICNMKLAEFHEVLGESS*PVPVPD
Trigger: GTCTGGCACGGGCACTGGCCAGCTGCTCTCTCCAAG...TACCTCGTGGAATTCAGCCAGCTTCATGTTGCAAATCAGAAAGCTGACCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACAGGCGTGAGCCACTGTaGCCGGCCCCATCCATATTT +
Preference number: 4 (lower is better)
Translates to: PAFQCWELSTWFTGTAMNRREPL*PAPSIF
Trigger: AAATATGGATGGGGCCGGCCACAGTGGCTCACGCCT...GTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTGCACGTGCATCCCAGACACCACCATGGAGGCTGCTACTGTTACCAAAAGGAAGGGTTTTTGCCATCTTaGCCAGGCTGGCCTCGAACT +
Preference number: 4 (lower is better)
Translates to: VHVHPRHHHGGCYCYQKEGFLPS*PGWPRT
Trigger: AGTTCGAGGCCAGCCTGGCCAAGATGGCAAAAACCC...TTCCTTTTGGTAACAGTAGCAGCCTCCATGGTGGTGTCTGGGATGCACGTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGAATACTGGCGTGGTGTaGAATGAGGGGCTGGACCCA +
Preference number: 4 (lower is better)
Translates to: WFHSHVRGQEVRGSSAPWNTGVV*NEGLDP
Trigger: TGGGTCCAGCCCCTCATTCCACACCACGCCAGTATT...CCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TTCCTTGCTGTTCACAGAGACCAGACAGATGATATCGGTCCCGGAAATGCTTCTGCAGGCCAGAGTGGGTaGTGCTGCCCTCAGGATGTG +
Preference number: 4 (lower is better)
Translates to: FLAVHRDQTDDIGPGNASAGQSG*CCPQDV
Trigger: CACATCCTGAGGGCAGCACCACCCACTCTGGCCTGC...AGAAGCATTTCCGGGACCGATATCATCTGTCTGGTCTCTGTGAACAGCAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GGTGGCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGCAGGCCAGAGTGGGTaGTGCTGCCCTCAGGATGTG +
Preference number: 4 (lower is better)
Translates to: GGSSSERFDPLSTLDIKKAGQSG*CCPQDV
Trigger: CACATCCTGAGGGCAGCACCACCCACTCTGGCCTGC...CTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGGGGCTAGTCCTGCGATaGGCCAGCAGGCCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVGLVLR*ASRPEW
Trigger: CCACTCTGGCCTGCTGGCCCATCGCAGGACTAGCCC...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATCTGCCCGGCAGGTGCCTaGGCTAGTCCTGCGATGGGC +
Preference number: 4 (lower is better)
Translates to: KAPIVILEHSALWSIGGICPAGA*ASPAMG
Trigger: GCCCATCGCAGGACTAGCCCAGGCACCTGCCGGGCA...GATGCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CAA 72 bp CCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTaGACCACTTGCTCTAGGATGTCGGGACAATGGTCT +
Preference number: 4 (lower is better)
Translates to: PIKQGQEDSSRA*TTCSRMSGQWS
Trigger: AGACCATTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR CAA 72 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTaGGCTCCTGGGTTGACTACCTCAGGCTTCCCCATA +
Preference number: 4 (lower is better)
Translates to: RFRAPVPRSSLF*APGLTTSGFPI
Trigger: TATGGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAAGGTCAGGAAAGGTGTaGGCAGAAAATCAACAACAA +
Preference number: 4 (lower is better)
Translates to: VRGQEVRGSSAPWLSVRARSGKV*AENQQQ
Trigger: TTGTTGTTGATTTTCTGCTCACACCTTTCCTGACCT...TGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp TCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAAAGGTCAGGAAAGGTGTaGGCAGAAAATCAACAACAA +
Preference number: 4 (lower is better)
Translates to: SGHGCWQGRQPLGGVQGKRSGKV*AENQQQ
Trigger: TTGTTGTTGATTTTCTGCTCACACCTTTCCTGACCT...TTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATCACGTGGAAGCCTGGGTaGACGCCCAGGGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: KAPIVILEHSALWSIGGITWKPG*TPRALA
Trigger: AGCCAGAGCCCTGGGCGTTCACCCAGGCTTCCACGT...GATGCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp CTTGGGGTCAGCTTTCTGATTTGCAACATGAAGCTGGCTGAATTCCACGAGGTACTGTTGGTTCGACGGTaGCCCAAGCGAGGGGAACGT +
Preference number: 4 (lower is better)
Translates to: LGVSFLICNMKLAEFHEVLLVRR*PKRGER
Trigger: ACGTTCCCCTCGCTTGGGTCACCGTCGAACCAACAG...TACCTCGTGGAATTCAGCCAGCTTCATGTTGCAAATCAGAAAGCTGACCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGCTTTTAGGTGTTTCTaGACCCACATTTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: QRTGGERLLCSMALCQGRAFRCF*THIFMV
Trigger: GACCATGAAAATGTGGGTTCAGAAACACCTAAAAGC...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTCTCACAGGAGGGAGGTaGTGCTCTCCAAATGCTATG +
Preference number: 4 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTLTGGR*CSPNAM
Trigger: CATAGCATTTGGAGAGCATCACCTCCCTCCTGTGAG...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGCTCACAGGAGGGAGGTaGTGCTCTCCAAATGCTATG +
Preference number: 4 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLLTGGR*CSPNAM
Trigger: CATAGCATTTGGAGAGCATCACCTCCCTCCTGTGAG...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTTGGCCAATCTCAGCCTaGAGACCAGCCGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTWPISA*RPAAFF
Trigger: AAAGAAAGCGGCTGGTCTTCAGGCTGAGATTGGCCA...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000542302.6
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCCATCCAACATGTCCTTaGGGTCATGTATCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFHPTCP*GHVSLQ
Trigger: CTGGAGAGATACATGACCTCAAGGACATGTTGGATG...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCACAGCCTGCAAGGATTTaGCCCGTTCTTTCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPQPARI*PVLSSC
Trigger: GCAGCTTGAAAGAACGGGTCAAATCCTTGCAGGCTG...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp CGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCACAGCCTGCAAGGATTTaGCCCGTTCTTTCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: RAPVPRSSLFLAPGLTTSQPARI*PVLSSC
Trigger: GCAGCTTGAAAGAACGGGTCAAATCCTTGCAGGCTG...TGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GTTTCCTCTCACAGGGAGAGGGATTGTTTCACAGCAGGGAGTAGGGGGAGCTGGCATCTTTGTACCTGGTaGTCTCTCTCTCCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: VSSHRERDCFTAGSRGSWHLCTW*SLSPSA
Trigger: AGCACTTGGAGAGAGAGATCACCAGGTACAAAGATG...CCAGCTCCCCCTACTCCCTGCTGTGAAACAATCCCTCTCCCTGTGAGAGGAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp ACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCCATCTTTGTACCTGGTaGTCTCTCTCTCCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: TSGFPIKQGQEDSSRALTHLCTW*SLSPSA
Trigger: AGCACTTGGAGAGAGAGATCACCAGGTACAAAGATG...GGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp ATGAGACACTCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGGCTGAGAGCTGTCGTTaGGATTGTCCTCCCGTCGTC +
Preference number: 4 (lower is better)
Translates to: MRHSESYKLHPLCPTARRAESCR*DCPPVV
Trigger: GACGACGGGAGGACAATCTCAACGACAGCTCTCAGC...CCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGAGTGTCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTGCTGAGAGCTGTCGTTaGGATTGTCCTCCCGTCGTC +
Preference number: 4 (lower is better)
Translates to: RMALANSCSSALSRSPFSAESCR*DCPPVV
Trigger: GACGACGGGAGGACAATCTCAACGACAGCTCTCAGC...AGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp CTAGGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTGCTGAGAGCTGTCGTTaGGATTGTCCTCCCGTCGTC +
Preference number: 4 (lower is better)
Translates to: LGCRDNGLLSAEEWRWQTAESCR*DCPPVV
Trigger: GACGACGGGAGGACAATCTCAACGACAGCTCTCAGC...AGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp CTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTCTGTCCTGTAGCTGCTaGGAGCTGTCGTTGAGATTG +
Preference number: 4 (lower is better)
Translates to: LVHWRHPLSLLNSKSIPGLSCSC*ELSLRL
Trigger: CAATCTCAACGACAGCTCTCAGCAGCTACAGGACAG...ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp TTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTCTGTCCTGTAGCTGCTaGGAGCTGTCGTTGAGATTG +
Preference number: 4 (lower is better)
Translates to: FPIKQGQEDSSRALTTCSLSCSC*ELSLRL
Trigger: CAATCTCAACGACAGCTCTCAGCAGCTACAGGACAG...AGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355446.9
ENST00000440394.7
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp CGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCACTGTCCTGTAGCTGCTaGGAGCTGTCGTTGAGATTG +
Preference number: 4 (lower is better)
Translates to: RAPVPRSSLFLAPGLTTSLSCSC*ELSLRL
Trigger: CAATCTCAACGACAGCTCTCAGCAGCTACAGGACAG...TGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp TGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTGTCCTGTAGCTGCTaGGAGCTGTCGTTGAGATTG +
Preference number: 4 (lower is better)
Translates to: WFHSHVRGQEVRGSSAPWLSCSC*ELSLRL
Trigger: CAATCTCAACGACAGCTCTCAGCAGCTACAGGACAG...CCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCTGGAATGGGAGGATTTaGAGTGGTCATCCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFWNGRI*SGHPRS
Trigger: ACTACGAGGATGACCACTTCAAATCCTCCCATTCCA...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp GGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGTACATGGAATGGGAGGATTTaGAGTGGTCATCCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: GGSGGLGHGRGLSGVQCTWNGRI*SGHPRS
Trigger: ACTACGAGGATGACCACTTCAAATCCTCCCATTCCA...TGTACATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCCTAAGAGGGGCTGGATaGTCTGGTCTGGGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: AERQSKMADVETVLESHFLRGAG*SGLGRA
Trigger: AGCCCTCCCCAGACCAGATCATCCAGCCCCTCTTAG...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp TTCCTTGCTGTTCACAGAGACCAGACAGATGATATCGGTCCCGGAAATGCTTCTAGGAAGCTGGTGGAGTaGGTCCACGGAGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: FLAVHRDQTDDIGPGNASRKLVE*VHGGSG
Trigger: CCCTGATCCTCCGTGGACTCACTCCACCAGCTTCCT...AGAAGCATTTCCGGGACCGATATCATCTGTCTGGTCTCTGTGAACAGCAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CTTGGGGTCAGCTTTCTGATTTGCAACATGAAGCTGGCTGAATTCCACGAGGTAAGGAAGCTGGTGGAGTaGGTCCACGGAGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: LGVSFLICNMKLAEFHEVRKLVE*VHGGSG
Trigger: CCCTGATCCTCCGTGGACTCACTCCACCAGCTTCCT...TACCTCGTGGAATTCAGCCAGCTTCATGTTGCAAATCAGAAAGCTGACCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TCTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGACTCTTCCAGGGCGTTaGCCACTTGCTCTAGGATGT +
Preference number: 4 (lower is better)
Translates to: SGPLEASSQPVELQVHSWTLPGR*PLALGC
Trigger: ACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGT...CCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp GCAGTTGTATGCCCATATGAAACCATGACCACTAGGAGAGGGGCATGGAATGACTCTTGGCTCCTGGGTTaGCTACCTCAGGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: AVVCPYETMTTRRGAWNDSWLLG*LPQASP
Trigger: TGGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGA...GTCATTCCATGCCCCTCTCCTAGTGGTCATGGTTTCATATGGGCATACAACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCTCTTGGCTCCTGGGTTaGCTACCTCAGGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: VCYLLKNGVGKLLQFCIVSWLLG*LPQASP
Trigger: TGGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGA...GACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp TCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAATCACACTTCTTCAAGTaGGCAAGTTGGGATGAAGTT +
Preference number: 4 (lower is better)
Translates to: SGHGCWQGRQPLGGVQGKSHFFK*ASWDEV
Trigger: AACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGA...TTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGATCACACTTCTTCAAGTaGGCAAGTTGGGATGAAGTT +
Preference number: 4 (lower is better)
Translates to: QRTGGERLLCSMALCQGRSHFFK*ASWDEV
Trigger: AACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGA...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp ACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCTCAGAGGACAGGAGGTaGGAGGCTCCTCTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: TMVCYLLKNGVGKLLQFCSEDRR*EAPLLH
Trigger: ATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGA...GCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000588412.5
CDS-3UTR TCA 90 bp AAACCCCGTTGGGATCACACCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTTCAGAGGACAGGAGGTaGGAGGCTCCTCTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: KPRWDHTHSSSCPLYGDISEDRR*EAPLLH
Trigger: ATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGA...AATGTCACCATAAAGAGGGCACGAAGAAGAGTGGGTGTGATCCCAACGGGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGGGACAAATCCTCTCAGCCTGTTaGACTCCAAGTCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: GQEDSSRALTTCSRMSGQILSAC*TPSPFL
Trigger: CAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGAT...TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000588412.5
CDS-3UTR TCA 90 bp GTTCTGCATTGTCCCGTTCACCTTTCTCTAACTCATCCTGAAGCTGCCCCCGGGATCCTCTCAGCCTGTTaGACTCCAAGTCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: VLHCPVHLSLTHPEAAPGILSAC*TPSPFL
Trigger: CAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGAT...CCCGGGGGCAGCTTCAGGATGAGTTAGAGAAAGGTGAACGGGACAATGCAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000588412.5
CDS-3UTR TCA 90 bp TTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGACATCTCTCCCTCACTaGGAAGTGGCCTTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: LTTSGFPIKQGQEDSSRATSLPH*EVAFSR
Trigger: CCTTGAAAAGGCCACTTCTCAGTGAGGGAGAGATGT...CGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
CDS-3UTR TCA 90 bp TCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGCCACGTTTACTACAGGCAAGCGGGTaGCTGAGACCCCCAAACTCA +
Preference number: 4 (lower is better)
Translates to: SESYKLHPLCPTARRPRLLQASG*LRPPNS
Trigger: TGAGTTTGGGGGTCTCAGTCACCCGCTTGCCTGTAG...TAAACGTGGCCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATGCCAATACCTTCATTaGTTTGCAGTCTTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: QAGLDEDSDLGRTSAPKPCQYLH*FAVLGS
Trigger: TGACCCCAAGACTGCAAATCAATGAAGGTATTGGCA...TGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GGAGAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCCTGCCTAATTATTTATaGCTGCTGTTGTCTACGCTA +
Preference number: 4 (lower is better)
Translates to: GESSWPVPVPDHLFRHGLLPNYL*LLLSTL
Trigger: TAGCGTAGACAACAGCAGTCATAAATAATTAGGCAG...GAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCTCCACCGTGGCCCCGTaGAGGCTGTTATCACACCGC +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGSTVAP*RLLSHR
Trigger: GCGGTGTGATAACAGCCTTCACGGGGCCACGGTGGA...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCCACGTTTATTACTaGACTCCTAGCCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RAPVPRSSLFLAPGLTTSGHVYY*TPSQPP
Trigger: TGGAGGCTGGCTAGGAGTTCAGTAATAAACGTGGCC...TGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTAGGTATATGAAAAGATaGGAAGCTCACACTGGGCTT +
Preference number: 4 (lower is better)
Translates to: PVPVPDHLFRHGLACCLGRYMKR*EAHTGL
Trigger: AAGCCCAGTGTGAGCTTCTCATCTTTTCATATACCT...ACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GGTGGCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGCTGGCCTCGAACTCCTaGTCTCAGGTGATCCGCCTG +
Preference number: 4 (lower is better)
Translates to: GGSSSERFDPLSTLDIKKLASNS*SQVIRL
Trigger: CAGGCGGATCACCTGAGATCAGGAGTTCGAGGCCAG...CTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACGATTCTCCTGCCTCCTaGGTAGCTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: PAFQCWELSTWFTGTAMNDSPAS*VAGITG
Trigger: GCCTGTAATCCCAGCTACTCAGGAGGCAGGAGAATC...GTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGTTGCCTCACAACCCTaGCCCTCAATAGCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: EMLTLLPFSAGSFLHGLRVASQP*PSIAEG
Trigger: TCCCTCCGCTATTGAGGGTCAGGGTTGTGAGGCAAC...CCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTACAACTGCGAGGCTCTaGGCCCCAGATTCTCGTTCC +
Preference number: 4 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVTTARL*APDSRS
Trigger: GGAACGAGAATCTGGGGCTCAGAGCCTCGCAGTTGT...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGACAACTGCGAGGCTCTaGGCCCCAGATTCTCGTTCC +
Preference number: 4 (lower is better)
Translates to: RDANTPAFQCWELSTWFTTTARL*APDSRS
Trigger: GGAACGAGAATCTGGGGCTCAGAGCCTCGCAGTTGT...CGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGGGTCACAAACTGTaGAACCTCTACCCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPWGHKL*NLYPEV
Trigger: GACCTCTGGGTAGAGGTTTCACAGTTTGTGACCCCA...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GTGCACGTGCATCCCAGACACCACCATGGAGGCTGCTACTGTTACCAAAAGGAAGCAACACTTCTCTTCTaGCGCATCAGGGAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: VHVHPRHHHGGCYCYQKEATLLF*RIREQS
Trigger: TGACTGCTCCCTGATGCGTCAGAAGAGAAGTGTTGC...TTCCTTTTGGTAACAGTAGCAGCCTCCATGGTGGTGTCTGGGATGCACGTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTACACACACATACAGCTaGAGGCAGCGGGTGCACGTG +
Preference number: 4 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVTHTYS*RQRVHV
Trigger: CACGTGCACCCGCTGCCTTCAGCTGTATGTGTGTGT...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTACACACACATACAGCTaGAGGCAGCGGGTGCACGTG +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSTHTYS*RQRVHV
Trigger: CACGTGCACCCGCTGCCTTCAGCTGTATGTGTGTGT...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGTACTCTGAACAAAATGGCTaGACTAAGCCTCTGATTGGC +
Preference number: 4 (lower is better)
Translates to: RRIRGSRSWQRVVRCPMYSEQNG*TKPLIG
Trigger: GCCAATCAGAGGCTTAGTTCAGCCATTTTGTTCAGA...GTACATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTCAGGGCTGCCGCTACTaGTGCTGCTGCCGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFQGCRY*CCCRPG
Trigger: GCCTGGGCGGCAGCAGCAGCAGTAGCGGCAGCCCTG...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000360905.9
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
CDS-3UTR GCA 90 bp CTTGGGGTCAGCTTTCTGATTTGCAACATGAAGCTGGCTGAATTCCACGAGGTATGCCACCTCCAACACTaGTTCCCGAACTCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: LGVSFLICNMKLAEFHEVCHLQH*FPNSLP
Trigger: CGGGAGGGAGTTCGGGAAGCAGTGTTGGAGGTGGCA...TACCTCGTGGAATTCAGCCAGCTTCATGTTGCAAATCAGAAAGCTGACCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACACCTGCCACCTCCAACACTaGTTCCCGAACTCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: PQYDNVNSLKQERLVENTCHLQH*FPNSLP
Trigger: CGGGAGGGAGTTCGGGAAGCAGTGTTGGAGGTGGCA...GGTGTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCAAAGGGTTTTCCCACTaGCACCTCCAACACTGCTTC +
Preference number: 4 (lower is better)
Translates to: SFSCQRTGGERLLCSMALKGFSH*HLQHCF
Trigger: GAAGCAGTGTTGGAGGTGGCAGTGGGAAAACCCTTT...GAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp GTGCTGCCCTCAGGATGTGTAGCTGCAGTAGATGGATGCAATACTGGCGTGGTGAAAGGGTTTTCCCACTaGCACCTCCAACACTGCTTC +
Preference number: 4 (lower is better)
Translates to: VLPSGCVAAVDGCNTGVVKGFSH*HLQHCF
Trigger: GAAGCAGTGTTGGAGGTGGCAGTGGGAAAACCCTTT...CACCACGCCAGTATTGCATCCATCTACTGCAGCTACACATCCTGAGGGCAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGAAAGGGTTTTCCCACTaGCACCTCCAACACTGCTTC +
Preference number: 4 (lower is better)
Translates to: KQGQEDSSRALTTCSRMSKGFSH*HLQHCF
Trigger: GAAGCAGTGTTGGAGGTGGCAGTGGGAAAACCCTTT...CGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GTGCACGTGCATCCCAGACACCACCATGGAGGCTGCTACTGTTACCAAAAGGAAGTGAGGTACAGTGGATaGCATACTCACAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: VHVHPRHHHGGCYCYQKEVRYSG*HTHRRE
Trigger: CTCCCTCCTGTGAGTATGGCATCCACTGTACCTCAC...TTCCTTTTGGTAACAGTAGCAGCCTCCATGGTGGTGTCTGGGATGCACGTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCAAGGTTCGCCAGTCCTaGTGCTACTATCCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: SFSCQRTGGERLLCSMALKVRQS*CYYPAE
Trigger: TTCAGCAGGATAGTAGCAGCAGGACTGGCGAACCTT...GAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp TCTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGCTCCTCTGTCAGCTCTaGTACACAAGGTTCGCCAGT +
Preference number: 4 (lower is better)
Translates to: SGPLEASSQPVELQVHSWLLCQL*YTRFAS
Trigger: ACTGGCGAACCTTGTGTAGCAGAGCTGACAGAGGAG...CCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGTGGCAGAAAGTCCTTTaGTCTGCAACATTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPWQKVL*SATFPE
Trigger: TTCTGGAAATGTTGCAGAGCAAAGGACTTTCTGCCA...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTGTGCATCTCTGCCTCTaGCAGTCGTCTTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: LVHWRHPLSLLNSKSIPGVHLCL*QSSCSL
Trigger: GAGAGAACAAGACGACTGGCAGAGGCAGAGATGCAC...ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp TCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCATGAACGTGCATCTCTaGCTCTGCCAGTCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: SFSCQRTGGERLLCSMALMNVHL*LCQSSC
Trigger: ACAAGACGACTGGCAGAGGCAGAGATGCACGTTCAT...GAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp GCTGGTGGAGTGAGTCCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTTTCTCAAACCTTCGATaGATCTCCTCTCTCAACATA +
Preference number: 4 (lower is better)
Translates to: AGGVSPRRIRGSRSWQRVFSNLR*ISSLNI
Trigger: TATGTTGAGAGAGGAGATGCATCGAAGGTTTGAGAA...AACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGGACTCACTCCACCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
CDS-3UTR GCA 90 bp GGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGTACAGTTTCTAGCTTTGTCTaGAGGGCGAGTAGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: GGSGGLGHGRGLSGVQCTVSSFV*RASSSV
Trigger: CACAGAACTACTCGCCCTGCAGACAAAGCTAGAAAC...TGTACATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
CDS-3UTR GCA 90 bp CTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTGTCCGCTCTTTCTCTaGAAGGGCCTCCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: LVHWRHPLSLLNSKSIPGCPLFL*KGLLQS
Trigger: ACTTTGGAGGAGGCCCTTGCAGAGAAAGAGCGGACA...ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGTCCGCTCTTTCTCTaGAAGGGCCTCCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPCPLFL*KGLLQS
Trigger: ACTTTGGAGGAGGCCCTTGCAGAGAAAGAGCGGACA...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGATCATCTCTGTCCCTCTaGTCCTTTAAGCGTTCAATT +
Preference number: 4 (lower is better)
Translates to: QRTGGERLLCSMALCQGRSSLSL*SFKRSI
Trigger: AATTGAACGCTTAAAGGAGCAGAGGGACAGAGATGA...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCTCTGAAAGGTCGCCTTaGAACAGGCTGACTTTTTCC +
Preference number: 4 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFSERSP*NRLTFS
Trigger: GGAAAAAGTCAGCCTGTTGCAAGGCGACCTTTCAGA...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGGCCAGAGAAGAAGCATaGTCTTTCAGATCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPAREEA*SFRSKS
Trigger: ACTTTTGGATCTGAAAGAGCATGCTTCTTCTCTGGC...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CTTCCTCCTCAGTTCCGAACCCAGGCAGGTGAAGAGGAGGCCAGGAGCAGATGTTCTGGCTTCCAATGCTaGCTCATGTGCCTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: LPPQFRTQAGEEEARSRCSGFQC*LMCLFQ
Trigger: TTGAAAAAGGCACATGAGGCAGCATTGGAAGCCAGA...ACATCTGCTCCTGGCCTCCTCTTCACCTGCCTGGGTTCGGAACTGAGGAGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GCTGGTGGAGTGAGTCCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTCTTGTGCTTCAGATTTaGTACCTTCTTATTCTGGTC +
Preference number: 4 (lower is better)
Translates to: AGGVSPRRIRGSRSWQRVLVLQI*YLLILV
Trigger: GACCAGAATAAGAAGGTAGCAAATCTGAAGCACAAG...AACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGGACTCACTCCACCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GCGGCCTCACTCTGCAGAGGGTGCCTGCTGCATTGCAGTCTCTTCTCATCCTTCCACCATTTCCCGCTCTaGAGTTATCTGTACACTTTC +
Preference number: 4 (lower is better)
Translates to: AASLCRGCLLHCSLFSSFHHFPL*SYLYTF
Trigger: GAAAGTGTACAGATAACTGCAGAGCGGGAAATGGTG...GAAGGATGAGAAGAGACTGCAATGCAGCAGGCACCCTCTGCAGAGTGAGGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGGGACAAGTGAGTTTCCTTTTCTaGCAGAGACTGCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GQEDSSRALTTCSRMSGQVSFLF*QRLLGG
Trigger: TCCACCCAGCAGTCTCTGGCAGAAAAGGAAACTCAC...TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp CCTGGGTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCGTGAGTTTCCTTTTCTaGCAGAGACTGCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: PGLTTSGFPIKQGQEDSSVSFLF*QRLLGG
Trigger: TCCACCCAGCAGTCTCTGGCAGAAAAGGAAACTCAC...GGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAACCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCGCCAGAAGAGCTTCTTaGTTCATCTCCAGAACTTCC +
Preference number: 4 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFARRAS*FISRTS
Trigger: GGAAGTTCTGGAGATGAAGCAAGAAGCTCTTCTGGC...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp GTTCTGCATTGTCCCGTTCACCTTTCTCTAACTCATCCTGAAGCTGCCCCCGGGGTCTGCTGCTTAAGCTaGTGTACCAGACGATCCTTC +
Preference number: 4 (lower is better)
Translates to: VLHCPVHLSLTHPEAAPGVCCLS*CTRRSF
Trigger: GAAGGATCGTCTGGTACAGCAGCTTAAGCAGCAGAC...CCCGGGGGCAGCTTCAGGATGAGTTAGAGAAAGGTGAACGGGACAATGCAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCAGCGTTGGCAAACTCCTaGAGTTCTGCATTGTCCCGT +
Preference number: 4 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPALANS*SSALSR
Trigger: ACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGC...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp TCTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGGCGTTGGCAAACTCCTaGAGTTCTGCATTGTCCCGT +
Preference number: 4 (lower is better)
Translates to: SGPLEASSQPVELQVHSWALANS*SSALSR
Trigger: ACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGC...CCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp CGGGTCATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTAGTCGGGACAATGGTCTaGTATCTGCTGAAGAATGGC +
Preference number: 4 (lower is better)
Translates to: RVIFCSSFSQAAWSSSKLVGTMV*YLLKNG
Trigger: GCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC...TAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCAAGGGCGTTGACCACTTaGTCTAGGATGTCGGGACAA +
Preference number: 4 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPRALTT*SRMSGQ
Trigger: TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCT...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp ATGAGACACTCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGCCTTGGGAGAACGAGTaGTCCCAAGCCATCGTGAGG +
Preference number: 4 (lower is better)
Translates to: MRHSESYKLHPLCPTARRPWENE*SQAIVR
Trigger: CCTCACGATGGCTTGGGAGCACTCGTTCTCCCAAGG...CCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGAGTGTCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCCCTTGGGAGAACGAGTaGTCCCAAGCCATCGTGAGG +
Preference number: 4 (lower is better)
Translates to: YLLKNGVGKLLQFCIVPFPWENE*SQAIVR
Trigger: CCTCACGATGGCTTGGGAGCACTCGTTCTCCCAAGG...GAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000588412.5
CDS-3UTR GCA 90 bp AAACCCCGTTGGGATCACACCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTTTACTGGGGCAAAGCTaGAGGCGGGGACAACAGGGT +
Preference number: 4 (lower is better)
Translates to: KPRWDHTHSSSCPLYGDILLGQS*RRGQQG
Trigger: ACCCTGTTGTCCCCGCCTGCAGCTTTGCCCCAGTAA...AATGTCACCATAAAGAGGGCACGAAGAAGAGTGGGTGTGATCCCAACGGGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGCCACGTTTATTACTGGGGCAAAGCTaGAGGCGGGGACAACAGGGT +
Preference number: 4 (lower is better)
Translates to: SESYKLHPLCPTARRPRLLLGQS*RRGQQG
Trigger: ACCCTGTTGTCCCCGCCTGCAGCTTTGCCCCAGTAA...TAAACGTGGCCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACAGCTCAGGACACGGGTaGTGGCAAGGCAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: TPQYDNVNSLKQERLVENSSGHG*WQGRQP
Trigger: AGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCT...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGGACATGCTATTTACTaGTTCAACTCCAGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: VRGQEVRGSSAPWLSVRAGHAIY*FNSSRY
Trigger: ATACCTGCTGGAGTTGAAGCAGTAAATAGCATGTCC...TGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCATACCTTCATTGATTTaGAGTCTTGGGGTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSIPSLI*SLGVSF
Trigger: AAAGCTGACCCCAAGACTGCAAATCAATGAAGGTAT...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTCTTGGTTCCACCGTGGCCCCGTGAAGGCTGTTATCACACCGCAGTTCTTTACACTCCTGCCTTTCAGTaGTGGGAGCTTTCTACATGG +
Preference number: 4 (lower is better)
Translates to: VLVPPWPREGCYHTAVLYTPAFQ*WELSTW
Trigger: CCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGT...GTAAAGAACTGCGGTGTGATAACAGCCTTCACGGGGCCACGGTGGAACCAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CTTGGGGTCAGCTTTCTGATTTGCAACATGAAGCTGGCTGAATTCCACGAGGTAGCTGGCCAGTGCCCGTaGCAGACCACTTGTTTAGGC +
Preference number: 4 (lower is better)
Translates to: LGVSFLICNMKLAEFHEVAGQCP*QTTCLG
Trigger: GCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGC...TACCTCGTGGAATTCAGCCAGCTTCATGTTGCAAATCAGAAAGCTGACCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCGGGATCTGGGCCACCTaGTTGGAGAGAGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: ERFDPLSTLDIKKVSVETGIWAT*LERAAG
Trigger: GCCAGCTGCTCTCTCCAAGCAGGTGGCCCAGATCCC...GGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCATCAGTAGCAGTTGTATaGCCATATGAAACCATGACC +
Preference number: 4 (lower is better)
Translates to: VRGQEVRGSSAPWLSVRASVAVV*PYETMT
Trigger: GGTCATGGTTTCATATGGGCATACAACTGCTACTGA...TGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGGACATTGGTTTGGGGTaGAGATCTTTAGGTGCTAAA +
Preference number: 4 (lower is better)
Translates to: PRVIFCSSFSQAAWSSSKDIGLG*RSLGAK
Trigger: TTTAGCACCTAAAGATCTGCACCCCAAACCAATGTC...CTTGGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440394.7
CDS-3UTR GCA 90 bp CCATGCAGTATTAGGCACACTGAGCTAGAACCCACGTCGGGTGAGGGTGGTTATCTCAAGCGATTCTCCTaGCTCCTGAGTAGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: PCSIRHTELEPTSGEGGYLKRFS*LLSSWD
Trigger: ATCCCAGCTACTCAGGAGGCAGGAGAATCGCTTGAG...ATAACCACCCTCACCCGACGTGGGTTCTAGCTCAGTGTGCCTAATACTGCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCAGCAGAGGGTGCCTGCTaGATTGCAGTCTCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPAEGAC*IAVSSH
Trigger: ATGAGAAGAGACTGCAATGCAGCAGGCACCCTCTGC...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGTCTGCAGAGGGTGCCTaGTGCATTGCAGTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLSAEGA*CIAVSS
Trigger: AGAAGAGACTGCAATGCAGCAGGCACCCTCTGCAGA...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACACGGGCGGCCTCACTCTaGAGAGGGTGCCTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: RFDPLSTLDIKKVSVETTRAASL*RGCLLH
Trigger: ATGCAGCAGGCACCCTCTGCAGAGTGAGGCCGCCCG...TGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TTCCTTGCTGTTCACAGAGACCAGACAGATGATATCGGTCCCGGAAATGCTTCTTCGGCAGGTGTCTCTTaGCCAGGCAGGCACTACCCT +
Preference number: 4 (lower is better)
Translates to: FLAVHRDQTDDIGPGNASSAGVS*PGRHYP
Trigger: AGGGTAGTGCCTGCCTGGGCAAGAGACACCTGCCGA...AGAAGCATTTCCGGGACCGATATCATCTGTCTGGTCTCTGTGAACAGCAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTCTTGGTTCCACCGTGGCCCCGTGAAGGCTGTTATCACACCGCAGTTCTTTACGATTCTCGTTCCTTTTaGTCGGCAGGTGTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: VLVPPWPREGCYHTAVLYDSRSF*SAGVSC
Trigger: GCAAGAGACACCTGCCGAGCAAAAGGAACGAGAATC...GTAAAGAACTGCGGTGTGATAACAGCCTTCACGGGGCCACGGTGGAACCAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCAAGCCCAGGTTACCATaGAGTATTAGGCACACTGAG +
Preference number: 4 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFKPRLP*SIRHTE
Trigger: CTCAGTGTGCCTAATACTGCATGGTAACCTGGGCTT...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GGTGGCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGCTGGATATCCTGCAATaGCCGGCAGGTGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GGSSSERFDPLSTLDIKKLDILQ*PAGAWA
Trigger: AGCCCAGGCACCTGCCGGGCATTGCAGGATATCCAG...CTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCATGTCAGGCAGCGGGTGCACGTaGATCCCAGACACCACCATG +
Preference number: 4 (lower is better)
Translates to: HPLSLLNSKSIPGFILMSGSGCT*IPDTTM
Trigger: CATGGTGGTGTCTGGGATGCACGTGCACCCGCTGCC...TGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCATGTGAGGTGTCTCTATaGCTACAAGTTGGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: VRGQEVRGSSAPWLSVRACEVSL*LQVGLR
Trigger: CCTTAAACCAACTTGTAGCCATAGAGACACCTCACA...TGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp TTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACATCCGGGAACGTGGAAGCCTaGGTGAACGCCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: FDPLSTLDIKKVSVETTSGNVEA*VNAQGS
Trigger: AGAGCCCTGGGCGTTCACCCAGGCTTCCACGTTCCC...GGATGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp TATGCTAGAAGAAGGTTCCAGGCAATGCACGAGGCTGAGGTTCAGAGAAGACGATCCCTCCCGTACTGTTaGTTCGACGGTGACCCAAGC +
Preference number: 4 (lower is better)
Translates to: YARRRFQAMHEAEVQRRRSLPYC*FDGDPS
Trigger: GCTTGGGTCACCGTCGAACCAACAGTACGGGAGGGA...TCGTCTTCTCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTCTTCTAGCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTTCCCTCCCGTACTGTTaGTTCGACGGTGACCCAAGC +
Preference number: 4 (lower is better)
Translates to: RMALANSCSSALSRSPFSSLPYC*FDGDPS
Trigger: GCTTGGGTCACCGTCGAACCAACAGTACGGGAGGGA...AGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTATCCCTCCCGTACTGTTaGTTCGACGGTGACCCAAGC +
Preference number: 4 (lower is better)
Translates to: EWRWQTPAVLHCPVHLSLSLPYC*FDGDPS
Trigger: GCTTGGGTCACCGTCGAACCAACAGTACGGGAGGGA...TAGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CCA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCAGGGAGTGAGGTACAGTaGATGCCATACTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPGSEVQ*MPYSQE
Trigger: CTCCTGTGAGTATGGCATCCACTGTACCTCACTCCC...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp CGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGGAGTGAGGTACAGTaGATGCCATACTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: RAPVPRSSLFLAPGLTTSGSEVQ*MPYSQE
Trigger: CTCCTGTGAGTATGGCATCCACTGTACCTCACTCCC...TGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCAGTCATCTGCATGTGCTaGTTTTCCTCCTGTACAACT +
Preference number: 4 (lower is better)
Translates to: QAGLDEDSDLGRTSAPKPVICMC*FSSCTT
Trigger: AGTTGTACAGGAGGAAAACCAGCACATGCAGATGAC...TGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGGGACAATCATCCTGGAGAGCCTaGATTGTCATCTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: GQEDSSRALTTCSRMSGQSSWRA*IVICMC
Trigger: GCACATGCAGATGACAATCCAGGCTCTCCAGGATGA...TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
CDS-3UTR CCA 90 bp CCTGGGTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCTCATCCTGGAGAGCCTaGATTGTCATCTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: PGLTTSGFPIKQGQEDSSSSWRA*IVICMC
Trigger: GCACATGCAGATGACAATCCAGGCTCTCCAGGATGA...GGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAACCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
CDS-3UTR CCA 90 bp CTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTATAGGAAGCTGGTGGAGTCACTCATCTCTGGACTaGCTCTGGCTTCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: LILPSRLVIVQVIGSWWSHSSLD*LWLPML
Trigger: CAGCATTGGAAGCCAGAGCCAGTCCAGAGATGAGTG...ACTCCACCAGCTTCCTATAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CCATGCAGTATTAGGCACACTGAGCTAGAACCCACGTCGGGTGAGGGTGGTTATCACTCATCTCTGGACTaGCTCTGGCTTCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: PCSIRHTELEPTSGEGGYHSSLD*LWLPML
Trigger: CAGCATTGGAAGCCAGAGCCAGTCCAGAGATGAGTG...ATAACCACCCTCACCCGACGTGGGTTCTAGCTCAGTGTGCCTAATACTGCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGCACTCATCTCTGGACTaGCTCTGGCTTCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: SGPLEASSQPVELQVHSWHSSLD*LWLPML
Trigger: CAGCATTGGAAGCCAGAGCCAGTCCAGAGATGAGTG...CCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp CGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCATCGGTCACTCATCTCTaGACTGGCTCTGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: RAPVPRSSLFLAPGLTTSSVTHL*TGSGFQ
Trigger: TTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACCGA...TGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CTTCCTCCTCAGTTCCGAACCCAGGCAGGTGAAGAGGAGGCCAGGAGCAGATGTCCTGTTTTTCAGCATTaGTCCTGGCTGATTCCTCTT +
Preference number: 4 (lower is better)
Translates to: LPPQFRTQAGEEEARSRCPVFQH*SWLIPL
Trigger: AAGAGGAATCAGCCAGGACCAATGCTGAAAAACAGG...ACATCTGCTCCTGGCCTCCTCTTCACCTGCCTGGGTTCGGAACTGAGGAGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCGCTTTACCTTCTCCATaGCCATCAGTAACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFALPSP*PSVTPP
Trigger: TGGAGGAGTTACTGATGGCCATGGAGAAGGTAAAGC...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTCCAGAGACTGCTGGGTaGAGGACAGCTTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTPETAG*RTALLS
Trigger: TGAAAGCAAAGCTGTCCTCCACCCAGCAGTCTCTGG...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp TGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCCAGAGACTGCTGGGTaGAGGACAGCTTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: WFHSHVRGQEVRGSSAPWPETAG*RTALLS
Trigger: TGAAAGCAAAGCTGTCCTCCACCCAGCAGTCTCTGG...CCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGGTCACGCTATGTTGCCCTGGCTGGTGCTCTTTCAACCTCACATGTTCTTCATCTGCCAGAGACTGCTaGGTGGAGGACAGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: RVTLCCPGWCSFNLTCSSSARDC*VEDSFA
Trigger: AGCAAAGCTGTCCTCCACCCAGCAGTCTCTGGCAGA...TGAAGAACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACATAGCGTGACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTCTGCCAGAGACTGCTaGGTGGAGGACAGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLSARDC*VEDSFA
Trigger: AGCAAAGCTGTCCTCCACCCAGCAGTCTCTGGCAGA...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GTACATGCAGATGTCAGGAAATGGCCACCCACAAGTAGATACTCAGAGCCCCTCTCTGCCAGAGACTGCTaGGTGGAGGACAGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: VHADVRKWPPTSRYSEPLSARDC*VEDSFA
Trigger: AGCAAAGCTGTCCTCCACCCAGCAGTCTCTGGCAGA...GAGGGGCTCTGAGTATCTACTTGTGGGTGGCCATTTCCTGACATCTGCATGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGAGGGGGTCTCGGTCATaGCAGAGGGTTGTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: DNGLLSAEEWRWQTPAVLRGSRS*QRVVRC
Trigger: ACACCTGACAACCCTCTGCCATGACCGAGACCCCCT...CAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTAGGGGGTCTCGGTCATaGCAGAGGGTTGTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVRGSRS*QRVVRC
Trigger: ACACCTGACAACCCTCTGCCATGACCGAGACCCCCT...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp AAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGGTTATAGGAAGCTGGTaGAGTGAGTCCACGGAGGAT +
Preference number: 4 (lower is better)
Translates to: KQGQEDSSRALTTCSRMSVIGSW*SESTED
Trigger: ATCCTCCGTGGACTCACTCCACCAGCTTCCTATAAC...CGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CTAACTCATCCTGAAGCTGCCCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGCAAGTTATAGGAAGCTaGTGGAGTGAGTCCACGGAG +
Preference number: 4 (lower is better)
Translates to: LTHPEAAPGSSSAAHSPKQVIGS*WSESTE
Trigger: CTCCGTGGACTCACTCCACCAGCTTCCTATAACTTG...CTTGGGAGAATGAGCTGCAGAAGATGACCCGGGGGCAGCTTCAGGATGAGTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp TCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCGCTGAAGAATGGCGTTaGCAAACTCCTGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: SFSCQRTGGERLLCSMALAEEWR*QTPAVL
Trigger: CAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGC...GAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp CCTGGGTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCGCTGAAGAATGGCGTTaGCAAACTCCTGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: PGLTTSGFPIKQGQEDSSAEEWR*QTPAVL
Trigger: CAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGC...GGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAACCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCCTATCTGCTGAAGAATaGCGTTGGCAAACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFLSAEE*RWQTPA
Trigger: TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAG...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp ACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCTCTTTTCTTGGCTCCTaGGTTGACTACCTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: TSGFPIKQGQEDSSRALTSFLGS*VDYLRL
Trigger: AAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGA...GGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGACCCTTTATCTACCCTaGACATCAAGAAGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: PRRIRGSRSWQRVVRCPMTLYLP*TSRRLV
Trigger: CACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGT...CATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000588412.5
CDS-3UTR CCA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAACCCTTTATCTACCCTaGACATCAAGAAGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: QRTGGERLLCSMALCQGRTLYLP*TSRRLV
Trigger: CACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGT...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCAGCTCTCTGGTCCATTaGAGGCATCCTCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLSSLVH*RHPLSL
Trigger: CAGGCTGAGAGGATGCCTCCAATGGACCAGAGAGCT...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp TGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAAGCTCTCTGGTCCATTaGAGGCATCCTCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: CRDNGLLSAEEWRWQTPASSLVH*RHPLSL
Trigger: CAGGCTGAGAGGATGCCTCCAATGGACCAGAGAGCT...TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000588412.5
CDS-3UTR CCA 90 bp CGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGAACACTCAGCTCTCTaGTCCATTGGAGGCATCCTC +
Preference number: 4 (lower is better)
Translates to: RAPVPRSSLFLAPGLTTSEHSAL*SIGGIL
Trigger: GAGGATGCCTCCAATGGACCAGAGAGCTGAGTGTTC...TGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp GTTTCCTCTCACAGGGAGAGGGATTGTTTCACAGCAGGGAGTAGGGGGAGCTGGCATCTTCTTGTTAACTaGCCGAGGAACAGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: VSSHRERDCFTAGSRGSWHLLVN*PRNRVR
Trigger: CCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATG...CCAGCTCCCCCTACTCCCTGCTGTGAAACAATCCCTCTCCCTGTGAGAGGAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTAGGCAGGCAGCCTCTTaGAGGTGTTCAGGGGAAACC +
Preference number: 4 (lower is better)
Translates to: EEWRWQTPAVLHCPVHLSRQAAS*RCSGET
Trigger: GGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCT...AGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
CDS-3UTR CCA 90 bp GAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGAACTTCAGCAGCCACTaGGCTGCAGGAGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: EMLTLLPFSAGSFLHGLRNFSSH*AAGAQD
Trigger: GTCCTGAGCTCCTGCAGCCCAGTGGCTGCTGAAGTT...CCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCATTGATTTGCAGTCTTaGGGTCAGCTTTCTGATTTG +
Preference number: 4 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSIDLQS*GQLSDL
Trigger: CAAATCAGAAAGCTGACCCCAAGACTGCAAATCAAT...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTGTGGTGGGAAGTTCCTaGACTGATGGGGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVVVGSS*TDGAVL
Trigger: CAGCACAGCCCCATCAGTCCAGGAACTTCCCACCAC...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGCCACGTTTAGGGACAGTCAAGGGCTaGTGGTGGGAAGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SESYKLHPLCPTARRPRLGTVKG*WWEVPG
Trigger: TCCAGGAACTTCCCACCACCAGCCCTTGACTGTCCC...TAAACGTGGCCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp ACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCCCTGCCTTTCAGTGCTaGGAGCTTTCTACATGGTTT +
Preference number: 4 (lower is better)
Translates to: TSGFPIKQGQEDSSRALTPAFQC*ELSTWF
Trigger: AAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG...GGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355446.9
ENST00000440394.7
CDS-3UTR CCA 90 bp GGTGGCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGCACGTGGGTGGGATCTaGGCCACCTGCTTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: GGSSSERFDPLSTLDIKKHVGGI*ATCLER
Trigger: TCTCTCCAAGCAGGTGGCCCAGATCCCACCCACGTG...CTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCCAGCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGGAAAGTCCACGTGGGTaGGATCTGGGCCACCTGCTT +
Preference number: 4 (lower is better)
Translates to: SSRYVSQNPLHLSLTEKWESPRG*DLGHLL
Trigger: AAGCAGGTGGCCCAGATCCCACCCACGTGGACTTTC...CCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGGCCGATGGAGGGGTTTaGGGAAAATTAAGGGCAACC +
Preference number: 4 (lower is better)
Translates to: WFHSHVRGQEVRGSSAPWADGGV*GKLRAT
Trigger: GGTTGCCCTTAATTTTCCCCAAACCCCTCCATCGGC...CCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CAGACAGATGATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGACCTCTTCTCTCACTCTaGGGGTGGGTGAGCCCGCAA +
Preference number: 4 (lower is better)
Translates to: QTDDIGPGNASSQKQCHRPLLSL*GWVSPQ
Trigger: TTGCGGGCTCACCCACCCCCAGAGTGAGAGAAGAGG...TCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATCATCTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTTTCCTCTCACAGGGAGAGGGATTGTTTCACAGCAGGGAGTAGGGGGAGCTGGAAATCCAAATGCCAGTaGATGGGCGGCTCAGAAACA +
Preference number: 4 (lower is better)
Translates to: VSSHRERDCFTAGSRGSWKSKCQ*MGGSET
Trigger: TGTTTCTGAGCCGCCCATCCACTGGCATTTGGATTT...CCAGCTCCCCCTACTCCCTGCTGTGAAACAATCCCTCTCCCTGTGAGAGGAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp ATGAGACACTCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGAACAGGAGGGCGGGATaGTTCTGGGAGGAACAGGAC +
Preference number: 4 (lower is better)
Translates to: MRHSESYKLHPLCPTARRNRRAG*FWEEQD
Trigger: GTCCTGTTCCTCCCAGAACCATCCCGCCCTCCTGTT...CCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGAGTGTCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CTGCCCTACAGCACGAAGGCCACGTTTATTACTGAACTCCTAGCCAGCCTCCAGTTGAGAAATGCCATGTaGTGTCACACTCCACGCAGC +
Preference number: 4 (lower is better)
Translates to: LPYSTKATFITELLASLQLRNAM*CHTPRS
Trigger: GCTGCGTGGAGTGTGACACCACATGGCATTTCTCAA...CTGGAGGCTGGCTAGGAGTTCAGTAATAAACGTGGCCTTCGTGCTGTAGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTACATGCAGATGTCAGGAAATGGCCACCCACAAGTAGATACTCAGAGCCCCTCAGAGATAGCACCAAGTaGGCAGGAGAGGTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: VHADVRKWPPTSRYSEPLRDSTK*AGEVLW
Trigger: CCACAGGACCTCTCCTGCCCACTTGGTGCTATCTCT...GAGGGGCTCTGAGTATCTACTTGTGGGTGGCCATTTCCTGACATCTGCATGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGAGGGCTTCCTCTCACCCGTGCTGGGTaGTCACTGGAAGAGATAGCA +
Preference number: 4 (lower is better)
Translates to: DIGPGNASSQKQCHRGLPLTRAG*SLEEIA
Trigger: TGCTATCTCTTCCAGTGACCACCCAGCACGGGTGAG...AGGAAGCCCTCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGGTCACGCTATGTTGCCCTGGCTGGTGCTCTTTCAACCTCACATGTTCTTCAAGTGCTCACCCGTGCTaGGTGGTCACTGGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: RVTLCCPGWCSFNLTCSSSAHPC*VVTGRD
Trigger: ATCTCTTCCAGTGACCACCCAGCACGGGTGAGCACT...TGAAGAACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACATAGCGTGACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AAACCCCGTTGGGATCACACCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTTGTGGAATGAGGGGCTaGACCCAGAGGGCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: KPRWDHTHSSSCPLYGDICGMRG*TQRACF
Trigger: AAAGCAGGCCCTCTGGGTCCAGCCCCTCATTCCACA...AATGTCACCATAAAGAGGGCACGAAGAAGAGTGGGTGTGATCCCAACGGGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGCTCCTCATCCTGGTCTaGGGAGGGCTTGTGATTTGT +
Preference number: 4 (lower is better)
Translates to: VGTMVCYLLKNGVGKLLQLLILV*GGLVIC
Trigger: ACAAATCACAAGCCCTCCCCAGACCAGGATGAGGAG...CTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GTTCTGCATTGTCCCGTTCACCTTTCTCTAACTCATCCTGAAGCTGCCCCCGGGCGGAGAGCATCCACCTaGTTTTCCTCCTGTACAACT +
Preference number: 4 (lower is better)
Translates to: VLHCPVHLSLTHPEAAPGRRAST*FSSCTT
Trigger: AGTTGTACAGGAGGAAAACCAGGTGGATGCTCTCCG...CCCGGGGGCAGCTTCAGGATGAGTTAGAGAAAGGTGAACGGGACAATGCAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CCTGGGTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCCGGAGAGCATCCACCTaGTTTTCCTCCTGTACAACT +
Preference number: 4 (lower is better)
Translates to: PGLTTSGFPIKQGQEDSSRRAST*FSSCTT
Trigger: AGTTGTACAGGAGGAAAACCAGGTGGATGCTCTCCG...GGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAACCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545948.5
ENST00000611180.4
3UTR CAA 72 bp TGGACAGAAATTGAGGGGCAAGTCACAATGCCCTTCTaGACACTGAAGGCGGCCTTGGGTCCAGTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: WTEIEGQVTMPF*TLKAALGPVCF
Trigger: AAAGCAGACTGGACCCAAGGCCGCCTTCAGTGTCAAGAAGGGCATTGTGACTTGCCCCTCAATTTCTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACACGTGGAAGCCTGGGTaGACGCCCAGGGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: GVGHLVKCWFNDLDSMRHTWKPG*TPRALA
Trigger: AGCCAGAGCCCTGGGCGTTCACCCAGGCTTCCACGT...GTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGCTGTTGGTTCGACGGTaGCCCAAGCGAGGGGAACGT +
Preference number: 4 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVLLVRR*PKRGER
Trigger: ACGTTCCCCTCGCTTGGGTCACCGTCGAACCAACAG...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCCTGTTGGTTCGACGGTaGCCCAAGCGAGGGGAACGT +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGLLVRR*PKRGER
Trigger: ACGTTCCCCTCGCTTGGGTCACCGTCGAACCAACAG...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCCTCACAGGAGGGAGGTaGTGCTCTCCAAATGCTATG +
Preference number: 4 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFLTGGR*CSPNAM
Trigger: CATAGCATTTGGAGAGCATCACCTCCCTCCTGTGAG...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp AGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATGGCTCCAGAAGGTCTTaGTGCTATTCATTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: RQGWMKTQTLGERVLPSHGSRRS*CYSLKN
Trigger: GTTCTTCAATGAATAGCATCAAGACCTTCTGGAGCC...ATGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGTACAGGCTCCAGAAGGTCTTaGTGCTATTCATTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: GGSGGLGHGRGLSGVQCTGSRRS*CYSLKN
Trigger: GTTCTTCAATGAATAGCATCAAGACCTTCTGGAGCC...TGTACATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCGGCTCCAGAAGGTCTTaGTGCTATTCATTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFGSRRS*CYSLKN
Trigger: GTTCTTCAATGAATAGCATCAAGACCTTCTGGAGCC...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp CCTGGGTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCCATCCAACATGTCCTTaGGGTCATGTATCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PGLTTSGFPIKQGQEDSSHPTCP*GHVSLQ
Trigger: CTGGAGAGATACATGACCTCAAGGACATGTTGGATG...GGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAACCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTCAGCCTGCAAGGATTTaGCCCGTTCTTTCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: GCRDNGLLSAEEWRWQTPQPARI*PVLSSC
Trigger: GCAGCTTGAAAGAACGGGTCAAATCCTTGCAGGCTG...AGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCAGCCTGCAAGGATTTaGCCCGTTCTTTCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: GPLEASSQPVELQVHSWFQPARI*PVLSSC
Trigger: GCAGCTTGAAAGAACGGGTCAAATCCTTGCAGGCTG...AAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp GTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCCATCTTTGTACCTGGTaGTCTCTCTCTCCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: VDYLRLPHKAGSRGLFQGHLCTW*SLSPSA
Trigger: AGCACTTGGAGAGAGAGATCACCAGGTACAAAGATG...GCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp CTGCCCTACAGCACGAAGGCCACGTTTATTACTGAACTCCTAGCCAGCCTCCAGCATCTTTGTACCTGGTaGTCTCTCTCTCCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: LPYSTKATFITELLASLQHLCTW*SLSPSA
Trigger: AGCACTTGGAGAGAGAGATCACCAGGTACAAAGATG...CTGGAGGCTGGCTAGGAGTTCAGTAATAAACGTGGCCTTCGTGCTGTAGGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CTTGGGGTCAGCTTTCTGATTTGCAACATGAAGCTGGCTGAATTCCACGAGGTAGCTGAGAGCTGTCGTTaGGATTGTCCTCCCGTCGTC +
Preference number: 4 (lower is better)
Translates to: LGVSFLICNMKLAEFHEVAESCR*DCPPVV
Trigger: GACGACGGGAGGACAATCTCAACGACAGCTCTCAGC...TACCTCGTGGAATTCAGCCAGCTTCATGTTGCAAATCAGAAAGCTGACCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCCTGTCCTGTAGCTGCTaGGAGCTGTCGTTGAGATTG +
Preference number: 4 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFLSCSC*ELSLRL
Trigger: CAATCTCAACGACAGCTCTCAGCAGCTACAGGACAG...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GTACATGCAGATGTCAGGAAATGGCCACCCACAAGTAGATACTCAGAGCCCCTCCTGTCCTGTAGCTGCTaGGAGCTGTCGTTGAGATTG +
Preference number: 4 (lower is better)
Translates to: VHADVRKWPPTSRYSEPLLSCSC*ELSLRL
Trigger: CAATCTCAACGACAGCTCTCAGCAGCTACAGGACAG...GAGGGGCTCTGAGTATCTACTTGTGGGTGGCCATTTCCTGACATCTGCATGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGCTAAGAGGGGCTGGATaGTCTGGTCTGGGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: DGRCRNGAGITLLQVSKLLRGAG*SGLGRA
Trigger: AGCCCTCCCCAGACCAGATCATCCAGCCCCTCTTAG...CAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp GAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCAGGAAGCTGGTGGAGTaGGTCCACGGAGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: ERFDPLSTLDIKKVSVETRKLVE*VHGGSG
Trigger: CCCTGATCCTCCGTGGACTCACTCCACCAGCTTCCT...GGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp GCTACGTCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCAGGAAGCTGGTGGAGTaGGTCCACGGAGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: ATSLTMPIPSLICSLGVSRKLVE*VHGGSG
Trigger: CCCTGATCCTCCGTGGACTCACTCCACCAGCTTCCT...GCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGACGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTTTCTCTAACTCATCCTaGAGCTGCCCCCGGGTCATC +
Preference number: 4 (lower is better)
Translates to: EEWRWQTPAVLHCPVHLSFSNSS*SCPRVI
Trigger: GATGACCCGGGGGCAGCTTCAGGATGAGTTAGAGAA...AGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTTCTCTAACTCATCCTaGAGCTGCCCCCGGGTCATC +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSFSNSS*SCPRVI
Trigger: GATGACCCGGGGGCAGCTTCAGGATGAGTTAGAGAA...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp CCATGCAGTATTAGGCACACTGAGCTAGAACCCACGTCGGGTGAGGGTGGTTATTGGTCTGCTATCTGCTaGAGAATGGCGTTGGCAAAC +
Preference number: 4 (lower is better)
Translates to: PCSIRHTELEPTSGEGGYWSAIC*RMALAN
Trigger: GTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCA...ATAACCACCCTCACCCGACGTGGGTTCTAGCTCAGTGTGCCTAATACTGCATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAACTCTTCCAGGGCGTTaGCCACTTGCTCTAGGATGT +
Preference number: 4 (lower is better)
Translates to: CRDNGLLSAEEWRWQTPATLPGR*PLALGC
Trigger: ACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGT...TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCACTCTTCCAGGGCGTTaGCCACTTGCTCTAGGATGT +
Preference number: 4 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLTLPGR*PLALGC
Trigger: ACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGT...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp ACACACCTTAAGATCGGGGAGGGGAAGGACATGCTATTTACTGCTTCAACTCCATCAGAGGACAGGAGGTaGGAGGCTCCTCTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: THLKIGEGKDMLFTASTPSEDRR*EAPLLH
Trigger: ATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGA...TGGAGTTGAAGCAGTAAATAGCATGTCCTTCCCCTCCCCGATCTTAAGGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTATCCTCTCAGCCTGTTaGACTCCAAGTCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: LVHWRHPLSLLNSKSIPGILSAC*TPSPFL
Trigger: CAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGAT...ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTATCCTCTCAGCCTGTTaGACTCCAAGTCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTILSAC*TPSPFL
Trigger: CAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGAT...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp CTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTATAGGAAGCTGGTGGAGTATCCTCTCAGCCTGTTaGACTCCAAGTCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: LILPSRLVIVQVIGSWWSILSAC*TPSPFL
Trigger: CAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGAT...ACTCCACCAGCTTCCTATAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000588412.5
CDS-3UTR TCA 90 bp TCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCTTTCTGGCTCCCAAGCCATCGTaGGGCCTGCTCACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SLTMPIPSLICSLGVSFLAPKPS*GLLTAP
Trigger: GGGAGCTGTGAGCAGGCCTCACGATGGCTTGGGAGC...CAGAAAGCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCGCAAAGCTAGCAGGGTaGGTGAGGGATCACAACTTC +
Preference number: 4 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFAKLAG*VRDHNF
Trigger: GAAGTTGTGATCCCTCACTCACCCTGCTAGCTTTGC...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GTACATGCAGATGTCAGGAAATGGCCACCCACAAGTAGATACTCAGAGCCCCTCGCAAAGCTAGCAGGGTaGGTGAGGGATCACAACTTC +
Preference number: 4 (lower is better)
Translates to: VHADVRKWPPTSRYSEPLAKLAG*VRDHNF
Trigger: GAAGTTGTGATCCCTCACTCACCCTGCTAGCTTTGC...GAGGGGCTCTGAGTATCTACTTGTGGGTGGCCATTTCCTGACATCTGCATGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp ATAAAGCGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGCTACAGGCAAGCGGGTaGCTGAGACCCCCAAACTCA +
Preference number: 4 (lower is better)
Translates to: IKRDANTPAFQCWELSTWLQASG*LRPPNS
Trigger: TGAGTTTGGGGGTCTCAGTCACCCGCTTGCCTGTAG...CCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCGCTTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCATGCAGTATTAGGCACACTGAGCTAGAACCCACGTCGGGTGAGGGTGGTTATTCTTATCAGGAGATGTaGGTGTCTGCTGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: PCSIRHTELEPTSGEGGYSYQEM*VSAGFW
Trigger: CCAGAACCCAGCAGACACTCACATCTCCTGATAAGA...ATAACCACCCTCACCCGACGTGGGTTCTAGCTCAGTGTGCCTAATACTGCATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GGTGGCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGGGAAGTTCCTGGACTaGTGGGGCTGTGCTGACTCT +
Preference number: 4 (lower is better)
Translates to: GGSSSERFDPLSTLDIKKGKFLD*WGCADS
Trigger: AGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCC...CTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGGGGGAGCTGGAAATCTaGCCATGTCAGTTAATGGGA +
Preference number: 4 (lower is better)
Translates to: WFHSHVRGQEVRGSSAPWGELEI*PCQLMG
Trigger: TCCCATTAACTGACATGGTCAGATTTCCAGCTCCCC...CCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACATCCACCGTGGCCCCGTaGAGGCTGTTATCACACCGC +
Preference number: 4 (lower is better)
Translates to: RFDPLSTLDIKKVSVETTSTVAP*RLLSHR
Trigger: GCGGTGTGATAACAGCCTTCACGGGGCCACGGTGGA...TGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GTACATGCAGATGTCAGGAAATGGCCACCCACAAGTAGATACTCAGAGCCCCTCGCCCATATGAAACCATaGCCACTAGGAGAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: VHADVRKWPPTSRYSEPLAHMKP*PLGEGH
Trigger: ATGCCCCTCTCCTAGTGGTCATGGTTTCATATGGGC...GAGGGGCTCTGAGTATCTACTTGTGGGTGGCCATTTCCTGACATCTGCATGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGGGTCACGCTATGTTGCCCTGGCTGGTGCTCTTTCAACCTCACATGTTCTTCAGCCCATATGAAACCATaGCCACTAGGAGAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: RVTLCCPGWCSFNLTCSSAHMKP*PLGEGH
Trigger: ATGCCCCTCTCCTAGTGGTCATGGTTTCATATGGGC...TGAAGAACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACATAGCGTGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTCAATGGACAGAAATTaGGGGGCAAGTCACAATGCC +
Preference number: 4 (lower is better)
Translates to: SFSCQRTGGERLLCSMALSMDRN*GASHNA
Trigger: GGCATTGTGACTTGCCCCTCAATTTCTGTCCATTGA...GAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCTAGTGTGATGGGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACCACTCTGGGGGTGGGTaGGCCCGCAAGTTCCTCATG +
Preference number: 4 (lower is better)
Translates to: PSVMGVGHLVKCWFNDLDHSGGG*ARKFLM
Trigger: CATGAGGAACTTGCGGGCTCACCCACCCCCAGAGTG...GTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCCCATCACACTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp ATAAAGCGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGGTTGCCTCACAACCCTaGCCCTCAATAGCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: IKRDANTPAFQCWELSTWVASQP*PSIAEG
Trigger: TCCCTCCGCTATTGAGGGTCAGGGTTGTGAGGCAAC...CCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCGCTTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCAGGGTCCGCTGGGCTTaGGAAATGCCATGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: AERQSKMADVETVLESHFRVRWA*EMPCGV
Trigger: GACACCACATGGCATTTCTCAAGCCCAGCGGACCCT...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGGGACAATCACTTGCCTTGAGGTaGGACTTTCCAACTCAGCTA +
Preference number: 4 (lower is better)
Translates to: GQEDSSRALTTCSRMSGQSLALR*DFPTQL
Trigger: TAGCTGAGTTGGAAAGTCTCACCTCAAGGCAAGTGA...TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTTCCACCTGTAGCTGCTaGGAGCTGTCGTTGAGATTG +
Preference number: 4 (lower is better)
Translates to: GCRDNGLLSAEEWRWQTPSTCSC*ELSLRL
Trigger: CAATCTCAACGACAGCTCTCAGCAGCTACAGGTGGA...AGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347735.10
ENST00000542302.6
CDS-3UTR TCA 90 bp GGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGTACATCTGAACAAAATGGCTaGACTAAGCCTCTGATTGGC +
Preference number: 4 (lower is better)
Translates to: GGSGGLGHGRGLSGVQCTSEQNG*TKPLIG
Trigger: GCCAATCAGAGGCTTAGTTCAGCCATTTTGTTCAGA...TGTACATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GCTACGTCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCTGCCACCTCCAACACTaGTTCCCGAACTCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: ATSLTMPIPSLICSLGVSCHLQH*FPNSLP
Trigger: CGGGAGGGAGTTCGGGAAGCAGTGTTGGAGGTGGCA...GCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGACGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACGTGAGGTACAGTGGATaGCATACTCACAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: PAFQCWELSTWFTGTAMNVRYSG*HTHRRE
Trigger: CTCCCTCCTGTGAGTATGGCATCCACTGTACCTCAC...GTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTTGAAGAACTCAATTTaGTCTCCTTTACTTCCACAT +
Preference number: 4 (lower is better)
Translates to: ESSWPVPVPDHLFRHGLALKNSI*SPLLPH
Trigger: ATGTGGAAGTAAAGGAGAGCAAATTGAGTTCTTCAA...GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGGTTCGCCAGTCCTGCTaGTACTATCCTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: WFHSHVRGQEVRGSSAPWVRQSC*YYPAET
Trigger: TGTTTCAGCAGGATAGTAGCAGCAGGACTGGCGAAC...CCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTGTTCGCCAGTCCTGCTaGTACTATCCTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTVRQSC*YYPAET
Trigger: TGTTTCAGCAGGATAGTAGCAGCAGGACTGGCGAAC...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp CCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACGTGCATCTCTGCCTCTaGCAGTCGTCTTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: PAFQCWELSTWFTGTAMNVHLCL*QSSCSL
Trigger: GAGAGAACAAGACGACTGGCAGAGGCAGAGATGCAC...GTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTATGAACGTGCATCTCTaGCTCTGCCAGTCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: LVHWRHPLSLLNSKSIPGMNVHL*LCQSSC
Trigger: ACAAGACGACTGGCAGAGGCAGAGATGCACGTTCAT...ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGATTCTCAAACCTTCGATaGATCTCCTCTCTCAACATA +
Preference number: 4 (lower is better)
Translates to: QRTGGERLLCSMALCQGRFSNLR*ISSLNI
Trigger: TATGTTGAGAGAGGAGATGCATCGAAGGTTTGAGAA...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp GTGCACGTGCATCCCAGACACCACCATGGAGGCTGCTACTGTTACCAAAAGGAATTGGTGGTGTCAGCCTaGAAGGATTTGACCCGTTCT +
Preference number: 4 (lower is better)
Translates to: VHVHPRHHHGGCYCYQKELVVSA*KDLTRS
Trigger: AGAACGGGTCAAATCCTTGCAGGCTGACACCACCAA...TTCCTTTTGGTAACAGTAGCAGCCTCCATGGTGGTGTCTGGGATGCACGTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTGGTGGTGTCAGCCTaGAAGGATTTGACCCGTTCT +
Preference number: 4 (lower is better)
Translates to: VGTMVCYLLKNGVGKLLQLVVSA*KDLTRS
Trigger: AGAACGGGTCAAATCCTTGCAGGCTGACACCACCAA...CTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GTACATGCAGATGTCAGGAAATGGCCACCCACAAGTAGATACTCAGAGCCCCTCTGTCCGCTCTTTCTCTaGAAGGGCCTCCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: VHADVRKWPPTSRYSEPLCPLFL*KGLLQS
Trigger: ACTTTGGAGGAGGCCCTTGCAGAGAAAGAGCGGACA...GAGGGGCTCTGAGTATCTACTTGTGGGTGGCCATTTCCTGACATCTGCATGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGTCTGAAAGGTCGCCTTaGAACAGGCTGACTTTTTCC +
Preference number: 4 (lower is better)
Translates to: KQGQEDSSRALTTCSRMSSERSP*NRLTFS
Trigger: GGAAAAAGTCAGCCTGTTGCAAGGCGACCTTTCAGA...CGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp TGCGACAGACAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTTCTGGCTTCCAATGCTaGCTCATGTGCCTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: CDRQAGLDEDSDLGRTSASGFQC*LMCLFQ
Trigger: TTGAAAAAGGCACATGAGGCAGCATTGGAAGCCAGA...AGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTGTCTGTCGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCTCTGGCTTCCAATGCTaGCTCATGTGCCTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFSGFQC*LMCLFQ
Trigger: TTGAAAAAGGCACATGAGGCAGCATTGGAAGCCAGA...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGCTTGTGCTTCAGATTTaGTACCTTCTTATTCTGGTC +
Preference number: 4 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPLVLQI*YLLILV
Trigger: GACCAGAATAAGAAGGTAGCAAATCTGAAGCACAAG...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCCACCATTTCCCGCTCTaGAGTTATCTGTACACTTTC +
Preference number: 4 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFHHFPL*SYLYTF
Trigger: GAAAGTGTACAGATAACTGCAGAGCGGGAAATGGTG...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCATGGATTCTAGTTCCTaGTTTACCTTCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFMDSSS*FTFSMA
Trigger: GGCCATGGAGAAGGTAAAGCAGGAACTAGAATCCAT...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp CTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTTTCTGCCAGAGACTaGTGGGTGGAGGACAGCTTT +
Preference number: 4 (lower is better)
Translates to: LVHWRHPLSLLNSKSIPGFSARD*WVEDSF
Trigger: AAAGCTGTCCTCCACCCAGCAGTCTCTGGCAGAAAA...ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp GTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGGTGAGTTTCCTTTTCTaGCAGAGACTGCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: VGTMVCYLLKNGVGKLLQVSFLF*QRLLGG
Trigger: TCCACCCAGCAGTCTCTGGCAGAAAAGGAAACTCAC...CTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp CCTGGGTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCGCCAGAAGAGCTTCTTaGTTCATCTCCAGAACTTCC +
Preference number: 4 (lower is better)
Translates to: PGLTTSGFPIKQGQEDSSARRAS*FISRTS
Trigger: GGAAGTTCTGGAGATGAAGCAAGAAGCTCTTCTGGC...GGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAACCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp AAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGGCCAGAAGAGCTTCTTaGTTCATCTCCAGAACTTCC +
Preference number: 4 (lower is better)
Translates to: KQGQEDSSRALTTCSRMSARRAS*FISRTS
Trigger: GGAAGTTCTGGAGATGAAGCAAGAAGCTCTTCTGGC...CGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCAGTCTGCTGCTTAAGCTaGTGTACCAGACGATCCTTC +
Preference number: 4 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPVCCLS*CTRRSF
Trigger: GAAGGATCGTCTGGTACAGCAGCTTAAGCAGCAGAC...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp CTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTGTCTGCTGCTTAAGCTaGTGTACCAGACGATCCTTC +
Preference number: 4 (lower is better)
Translates to: LVHWRHPLSLLNSKSIPGVCCLS*CTRRSF
Trigger: GAAGGATCGTCTGGTACAGCAGCTTAAGCAGCAGAC...ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp CCTGGGTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCCGATTTTGCGTCTGCTaGTTAAGCTGCTGTACCAGA +
Preference number: 4 (lower is better)
Translates to: PGLTTSGFPIKQGQEDSSRFCVC*LSCCTR
Trigger: TCTGGTACAGCAGCTTAAGCAGCAGACGCAAAATCG...GGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAACCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCCGATTTTGCGTCTGCTaGTTAAGCTGCTGTACCAGA +
Preference number: 4 (lower is better)
Translates to: VDYLRLPHKAGSRGLFQGRFCVC*LSCCTR
Trigger: TCTGGTACAGCAGCTTAAGCAGCAGACGCAAAATCG...GCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp TGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGGTCGGGACAATGGTCTaGTATCTGCTGAAGAATGGC +
Preference number: 4 (lower is better)
Translates to: WFHSHVRGQEVRGSSAPWVGTMV*YLLKNG
Trigger: GCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC...CCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp TGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAAGGGCGTTGACCACTTaGTCTAGGATGTCGGGACAA +
Preference number: 4 (lower is better)
Translates to: CRDNGLLSAEEWRWQTPARALTT*SRMSGQ
Trigger: TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCT...TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GTGGAGAACACCTCACACCATCTTCTTGTTAACTGGCCGAGGAACAGAGTGAGGAGGGCGTTGACCACTTaGTCTAGGATGTCGGGACAA +
Preference number: 4 (lower is better)
Translates to: VENTSHHLLVNWPRNRVRRALTT*SRMSGQ
Trigger: TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCT...CCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGGTGTTCTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp AGGGTCACGCTATGTTGCCCTGGCTGGTGCTCTTTCAACCTCACATGTTCTTCAAGGGCGTTGACCACTTaGTCTAGGATGTCGGGACAA +
Preference number: 4 (lower is better)
Translates to: RVTLCCPGWCSFNLTCSSRALTT*SRMSGQ
Trigger: TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCT...TGAAGAACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACATAGCGTGACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp GGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTAGGGCGTTGACCACTTaGTCTAGGATGTCGGGACAA +
Preference number: 4 (lower is better)
Translates to: GCRDNGLLSAEEWRWQTPRALTT*SRMSGQ
Trigger: TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCT...AGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp TCTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGGTTTGTAGTGTTTGGTaGCAAGAAGGTTCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: SGPLEASSQPVELQVHSWVCSVW*QEGSGH
Trigger: GTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC...CCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCAGTTTGTAGTGTTTGGTaGCAAGAAGGTTCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPVCSVW*QEGSGH
Trigger: GTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp GTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTGTTGCCCTGGCTGGTaGTCTTTCAACCTCACATGT +
Preference number: 4 (lower is better)
Translates to: VGTMVCYLLKNGVGKLLQCCPGW*SFNLTC
Trigger: ACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACA...CTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000588412.5
CDS-3UTR GCA 90 bp CCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACGAAGGTTCCAGGCAATaGACGAGGCTGAGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: PAFQCWELSTWFTGTAMNEGSRQ*TRLRFR
Trigger: TCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTC...GTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTATACCTTCATTGATTTaGAGTCTTGGGGTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: PVPVPDHLFRHGLACCLGIPSLI*SLGVSF
Trigger: AAAGCTGACCCCAAGACTGCAAATCAATGAAGGTAT...ACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTAGGCATGGCCTCGCCTaGTGTCTTGGTTCCACCGTG +
Preference number: 4 (lower is better)
Translates to: RYVSQNPLHLSLTEKWPFRHGLA*CLGSTV
Trigger: CACGGTGGAACCAAGACAGCAGGCGAGGCCATGCCT...AAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCGTCAAGAAGATTCCTTaGTGTTCACAGAGACCAGAC +
Preference number: 4 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFVKKIP*CSQRPD
Trigger: GTCTGGTCTCTGTGAACAGCAAGGAATCTTCTTGAC...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp ATGAGACACTCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGCTAGCCAGCCTCCAGTaGCCAAGAACGGTCAAGAAG +
Preference number: 4 (lower is better)
Translates to: MRHSESYKLHPLCPTARRLASLQ*PRTVKK
Trigger: CTTCTTGACCGTTCTTGGGCACTGGAGGCTGGCTAG...CCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGAGTGTCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTGCTGCCCTCAGGATGTGTAGCTGCAGTAGATGGATGCAATACTGGCGTGGTGCTGAAAGCTACAAACTaGATCCACTCTGCCCTACAG +
Preference number: 4 (lower is better)
Translates to: VLPSGCVAAVDGCNTGVVLKATN*IHSALQ
Trigger: CTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAG...CACCACGCCAGTATTGCATCCATCTACTGCAGCTACACATCCTGAGGGCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGAAATTAAGGGCAACCTaGACTGAGTTTTCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPKLRAT*TEFSRL
Trigger: TAGCCTTGAAAACTCAGTGCAGGTTGCCCTTAATTT...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp ATGAGACACTCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGGGCAGCAAATCCAAATaGCAGTGGATGGGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: MRHSESYKLHPLCPTARRGSKSK*QWMGGS
Trigger: TGAGCCGCCCATCCACTGGCATTTGGATTTGCTGCC...CCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGAGTGTCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TCCAGCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGGGCAGCAAATCCAAATaGCAGTGGATGGGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: SSRYVSQNPLHLSLTEKWGSKSK*QWMGGS
Trigger: TGAGCCGCCCATCCACTGGCATTTGGATTTGCTGCC...CCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTGCAGAGGGTGCCTGCTaGATTGCAGTCTCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: GPLEASSQPVELQVHSWFAEGAC*IAVSSH
Trigger: ATGAGAAGAGACTGCAATGCAGCAGGCACCCTCTGC...AAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTACATGCAGATGTCAGGAAATGGCCACCCACAAGTAGATACTCAGAGCCCCTCTCTGCAGAGGGTGCCTaGTGCATTGCAGTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VHADVRKWPPTSRYSEPLSAEGA*CIAVSS
Trigger: AGAAGAGACTGCAATGCAGCAGGCACCCTCTGCAGA...GAGGGGCTCTGAGTATCTACTTGTGGGTGGCCATTTCCTGACATCTGCATGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TGCTATTTACTGCTTCAACTCCAGCAGGTATGTCTCACAGAATCCACTACATCTCGGGCGGCCTCACTCTaGAGAGGGTGCCTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: CYLLLQLQQVCLTESTTSRAASL*RGCLLH
Trigger: ATGCAGCAGGCACCCTCTGCAGAGTGAGGCCGCCCG...AGATGTAGTGGATTCTGTGAGACATACCTGCTGGAGTTGAAGCAGTAAATAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCGCCAGTGCTCACCCGTaGTGGGTGGTCACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGASAHP*WVVTGR
Trigger: TCTTCCAGTGACCACCCAGCACGGGTGAGCACTGGC...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCATGTCATGGACCCAGAGGGCCTaGTTTGGCCGGGGTGAATTC +
Preference number: 4 (lower is better)
Translates to: HPLSLLNSKSIPGFILMSWTQRA*FGRGEF
Trigger: GAATTCACCCCGGCCAAAGCAGGCCCTCTGGGTCCA...TGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGCTGGATATCCTGCAATaGCCGGCAGGTGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: DGRCRNGAGITLLQVSKLLDILQ*PAGAWA
Trigger: AGCCCAGGCACCTGCCGGGCATTGCAGGATATCCAG...CAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp ATTTATGCTAGAAGAAGGTTCCAGGCAATGCACGAGGCTGAGGTTCAGAGAAGACCCCACTGGATATCCTaGAATGCCCGGCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: IYARRRFQAMHEAEVQRRPHWIS*NARQVP
Trigger: AGGCACCTGCCGGGCATTGCAGGATATCCAGTGGGG...TCTTCTCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTCTTCTAGCATAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTGCTGCCCTCAGGATGTGTAGCTGCAGTAGATGGATGCAATACTGGCGTGGTGGCTCCTCCACTAAAGTaGAACACTTCTCTTCTGACG +
Preference number: 4 (lower is better)
Translates to: VLPSGCVAAVDGCNTGVVAPPLK*NTSLLT
Trigger: CGTCAGAAGAGAAGTGTTGCACTTTAGTGGAGGAGC...CACCACGCCAGTATTGCATCCATCTACTGCAGCTACACATCCTGAGGGCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGGCAGCGGGTGCACGTaGATCCCAGACACCACCATG +
Preference number: 4 (lower is better)
Translates to: AVLQRDSTLYLPWTSRRLGSGCT*IPDTTM
Trigger: CATGGTGGTGTCTGGGATGCACGTGCACCCGCTGCC...TAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCCTCTGATTGGCTATaGCCATATACCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GCRDNGLLSAEEWRWQTPASDWL*PYTLLL
Trigger: GAGGAGGAGGGTATATGGGCATAGCCAATCAGAGGC...AGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGAACGCCCAGGGCTCTaGCTGCTCGGCTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVERPGL*LLGSTF
Trigger: GAAGGTGGAGCCGAGCAGCCAGAGCCCTGGGCGTTC...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCGGGAGTGAGGTACAGTaGATGCCATACTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFGSEVQ*MPYSQE
Trigger: CTCCTGTGAGTATGGCATCCACTGTACCTCACTCCC...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTTCATCCTGGAGAGCCTaGATTGTCATCTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTSSWRA*IVICMC
Trigger: GCACATGCAGATGACAATCCAGGCTCTCCAGGATGA...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp AAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGATCCGCAATTCATCCTaGAGAGCCTGGATTGTCATC +
Preference number: 4 (lower is better)
Translates to: KQGQEDSSRALTTCSRMSIRNSS*RAWIVI
Trigger: GATGACAATCCAGGCTCTCCAGGATGAATTGCGGAT...CGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
CDS-3UTR CCA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCGAAGAAACAGCTCTTTaGCCTGCCGCTCATGCTCAG +
Preference number: 4 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFEETAL*PAAHAQ
Trigger: CTGAGCATGAGCGGCAGGCCAAAGAGCTGTTTCTTC...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp GCTGCCCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTTTACTATCTGAGAACTaGTTTGTGAGTGTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: AAPGSSSAAHSPKPPGHRLLSEN*FVSVSS
Trigger: GCTAGAAACACTCACAAACCAGTTCTCAGATAGTAA...ACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCGGGGGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
CDS-3UTR CCA 90 bp GGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTTCGGTCACTCATCTCTaGACTGGCTCTGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: GCRDNGLLSAEEWRWQTPSVTHL*TGSGFQ
Trigger: TTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACCGA...AGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GTTTCCTCTCACAGGGAGAGGGATTGTTTCACAGCAGGGAGTAGGGGGAGCTGGTTTCAGCATTGGTCCTaGCTGATTCCTCTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: VSSHRERDCFTAGSRGSWFQHWS*LIPLVL
Trigger: TAGCACAAGAGGAATCAGCCAGGACCAATGCTGAAA...CCAGCTCCCCCTACTCCCTGCTGTGAAACAATCCCTCTCCCTGTGAGAGGAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATCCTGTTTTTCAGCATTaGTCCTGGCTGATTCCTCTT +
Preference number: 4 (lower is better)
Translates to: RQGWMKTQTLGERVLPSHPVFQH*SWLIPL
Trigger: AAGAGGAATCAGCCAGGACCAATGCTGAAAAACAGG...ATGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp TTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGGCTTTACCTTCTCCATaGCCATCAGTAACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LTTSGFPIKQGQEDSSRAALPSP*PSVTPP
Trigger: TGGAGGAGTTACTGATGGCCATGGAGAAGGTAAAGC...CGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GCTGGTGGAGTGAGTCCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTACAGCTTTGCTTTCATaGATTCTAGTTCCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: AGGVSPRRIRGSRSWQRVTALLS*ILVPAL
Trigger: TAAAGCAGGAACTAGAATCCATGAAAGCAAAGCTGT...AACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGGACTCACTCCACCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp TGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCACCAGAGACTGCTGGGTaGAGGACAGCTTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: CRDNGLLSAEEWRWQTPAPETAG*RTALLS
Trigger: TGAAAGCAAAGCTGTCCTCCACCCAGCAGTCTCTGG...TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp AGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTTCTGCCAGAGACTGCTaGGTGGAGGACAGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: RMALANSCSSALSRSPFSSARDC*VEDSFA
Trigger: AGCAAAGCTGTCCTCCACCCAGCAGTCTCTGGCAGA...AGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTCTGCCAGAGACTGCTaGGTGGAGGACAGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSSARDC*VEDSFA
Trigger: AGCAAAGCTGTCCTCCACCCAGCAGTCTCTGGCAGA...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCAGCAGCCACTTCCTCTTaGGTCTTCTTCTTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPAATSS*VFFLED
Trigger: GTCCTCTAAGAAGAAGACCCAAGAGGAAGTGGCTGC...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp CCATGCAGTATTAGGCACACTGAGCTAGAACCCACGTCGGGTGAGGGTGGTTATGCAGCCACTTCCTCTTaGGTCTTCTTCTTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: PCSIRHTELEPTSGEGGYAATSS*VFFLED
Trigger: GTCCTCTAAGAAGAAGACCCAAGAGGAAGTGGCTGC...ATAACCACCCTCACCCGACGTGGGTTCTAGCTCAGTGTGCCTAATACTGCATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CAGACAGATGATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGAAGGGGGTCTCGGTCATaGCAGAGGGTTGTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: QTDDIGPGNASSQKQCHRRGSRS*QRVVRC
Trigger: ACACCTGACAACCCTCTGCCATGACCGAGACCCCCT...TCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATCATCTGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTGTTATAGGAAGCTGGTaGAGTGAGTCCACGGAGGAT +
Preference number: 4 (lower is better)
Translates to: LVHWRHPLSLLNSKSIPGVIGSW*SESTED
Trigger: ATCCTCCGTGGACTCACTCCACCAGCTTCCTATAAC...ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp TCTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGCAAGTTATAGGAAGCTaGTGGAGTGAGTCCACGGAG +
Preference number: 4 (lower is better)
Translates to: SGPLEASSQPVELQVHSWQVIGS*WSESTE
Trigger: CTCCGTGGACTCACTCCACCAGCTTCCTATAACTTG...CCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp GTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGGCTGAAGAATGGCGTTaGCAAACTCCTGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: VGTMVCYLLKNGVGKLLQAEEWR*QTPAVL
Trigger: CAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGC...CTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CTAACTCATCCTGAAGCTGCCCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGCTATCTGCTGAAGAATaGCGTTGGCAAACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LTHPEAAPGSSSAAHSPKLSAEE*RWQTPA
Trigger: TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAG...CTTGGGAGAATGAGCTGCAGAAGATGACCCGGGGGCAGCTTCAGGATGAGTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp TTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTCTTTTCTTGGCTCCTaGGTTGACTACCTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: LTTSGFPIKQGQEDSSRASFLGS*VDYLRL
Trigger: AAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGA...CGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GTCTTGGTTCCACCGTGGCCCCGTGAAGGCTGTTATCACACCGCAGTTCTTTACTCTTTTCTTGGCTCCTaGGTTGACTACCTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: VLVPPWPREGCYHTAVLYSFLGS*VDYLRL
Trigger: AAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGA...GTAAAGAACTGCGGTGTGATAACAGCCTTCACGGGGCCACGGTGGAACCAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGGGACAAGAAGTTTGTAGTGTTTaGTGCCAAGAAGGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: GQEDSSRALTTCSRMSGQEVCSV*CQEGSG
Trigger: CCCGGAACCTTCTTGGCACCAAACACTACAAACTTC...TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp TGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCAGCTCTCTGGTCCATTaGAGGCATCCTCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: WRHPLSLLNSKSIPGFILSSLVH*RHPLSL
Trigger: CAGGCTGAGAGGATGCCTCCAATGGACCAGAGAGCT...GAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp CCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACGAACACTCAGCTCTCTaGTCCATTGGAGGCATCCTC +
Preference number: 4 (lower is better)
Translates to: PAFQCWELSTWFTGTAMNEHSAL*SIGGIL
Trigger: GAGGATGCCTCCAATGGACCAGAGAGCTGAGTGTTC...GTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACACGGGCATCTGTTACTaGGGCAAAGCTGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: TPQYDNVNSLKQERLVENTGICY*GKAAGG
Trigger: CCCGCCTGCAGCTTTGCCCCAGTAACAGATGCCCGT...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp ATAAAGCGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGAACTTCAGCAGCCACTaGGCTGCAGGAGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: IKRDANTPAFQCWELSTWNFSSH*AAGAQD
Trigger: GTCCTGAGCTCCTGCAGCCCAGTGGCTGCTGAAGTT...CCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCGCTTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp ACACACCTTAAGATCGGGGAGGGGAAGGACATGCTATTTACTGCTTCAACTCCAGTGGTGGGAAGTTCCTaGACTGATGGGGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: THLKIGEGKDMLFTASTPVVGSS*TDGAVL
Trigger: CAGCACAGCCCCATCAGTCCAGGAACTTCCCACCAC...TGGAGTTGAAGCAGTAAATAGCATGTCCTTCCCCTCCCCGATCTTAAGGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCCCTCTCTGGCCAGCCTaGCTATCAGGAAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: YLLKNGVGKLLQFCIVPFPLWPA*LSGSIS
Trigger: TGAGATGCTTCCTGATAGCCAGGCTGGCCAGAGAGG...GAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355446.9
ENST00000440394.7
CDS-3UTR CCA 90 bp TGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCCCTCTCTGGCCAGCCTaGCTATCAGGAAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: WRHPLSLLNSKSIPGFILPLWPA*LSGSIS
Trigger: TGAGATGCTTCCTGATAGCCAGGCTGGCCAGAGAGG...GAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGCTATTTACTGCTTCAACTCCAGCAGGTATGTCTCACAGAATCCACTACATCTCCTCGCCTGCTGTCTTaGTTCCACCGTGGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: CYLLLQLQQVCLTESTTSPRLLS*FHRGPV
Trigger: CACGGGGCCACGGTGGAACCAAGACAGCAGGCGAGG...AGATGTAGTGGATTCTGTGAGACATACCTGCTGGAGTTGAAGCAGTAAATAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGCACGTGGGTGGGATCTaGGCCACCTGCTTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: DGRCRNGAGITLLQVSKLHVGGI*ATCLER
Trigger: TCTCTCCAAGCAGGTGGCCCAGATCCCACCCACGTG...CAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTCACGTGGGTGGGATCTaGGCCACCTGCTTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: RYVSQNPLHLSLTEKWPFHVGGI*ATCLER
Trigger: TCTCTCCAAGCAGGTGGCCCAGATCCCACCCACGTG...AAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACGCCGATGGAGGGGTTTaGGGAAAATTAAGGGCAACC +
Preference number: 4 (lower is better)
Translates to: PAFQCWELSTWFTGTAMNADGGV*GKLRAT
Trigger: GGTTGCCCTTAATTTTCCCCAAACCCCTCCATCGGC...GTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTCTTGGTTCCACCGTGGCCCCGTGAAGGCTGTTATCACACCGCAGTTCTTTACGTTACAAAACCCCGTTaGGATCACACCCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: VLVPPWPREGCYHTAVLYVTKPR*DHTHSS
Trigger: AGAAGAGTGGGTGTGATCCCAACGGGGTTTTGTAAC...GTAAAGAACTGCGGTGTGATAACAGCCTTCACGGGGCCACGGTGGAACCAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGATGAGAAGCTCACACTaGGCTTCTTCAGTTACAAAA +
Preference number: 4 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPMRSSH*ASSVTK
Trigger: TTTTGTAACTGAAGAAGCCCAGTGTGAGCTTCTCAT...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TTCCTTGCTGTTCACAGAGACCAGACAGATGATATCGGTCCCGGAAATGCTTCTAGGCGTGAGCCACTGTaGCCGGCCCCATCCATATTT +
Preference number: 4 (lower is better)
Translates to: FLAVHRDQTDDIGPGNASRREPL*PAPSIF
Trigger: AAATATGGATGGGGCCGGCCACAGTGGCTCACGCCT...AGAAGCATTTCCGGGACCGATATCATCTGTCTGGTCTCTGTGAACAGCAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TATGCTAGAAGAAGGTTCCAGGCAATGCACGAGGCTGAGGTTCAGAGAAGACGAGGGTTTTTGCCATCTTaGCCAGGCTGGCCTCGAACT +
Preference number: 4 (lower is better)
Translates to: YARRRFQAMHEAEVQRRRGFLPS*PGWPRT
Trigger: AGTTCGAGGCCAGCCTGGCCAAGATGGCAAAAACCC...TCGTCTTCTCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTCTTCTAGCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTGGGTTTTTGCCATCTTaGCCAGGCTGGCCTCGAACT +
Preference number: 4 (lower is better)
Translates to: AGMSHRIHYISPSLRSGLGFLPS*PGWPRT
Trigger: AGTTCGAGGCCAGCCTGGCCAAGATGGCAAAAACCC...AAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CTAACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGCTCTCACTCTGGGGGTaGGTGAGCCCGCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: LTPQYDNVNSLKQERLVELSLWG*VSPQVP
Trigger: AGGAACTTGCGGGCTCACCCACCCCCAGAGTGAGAG...CTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCCCAAATGCCAGTGGATaGGCGGCTCAGAAACATTTA +
Preference number: 4 (lower is better)
Translates to: SFSCQRTGGERLLCSMALPNASG*AAQKHL
Trigger: TAAATGTTTCTGAGCCGCCCATCCACTGGCATTTGG...GAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGCGGTCTTCTCTGCTTaGCTCTTTCCTCAAAGACTC +
Preference number: 4 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLAVFSA*LFPQRL
Trigger: GAGTCTTTGAGGAAAGAGCCAAGCAGAGAAGACCGC...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGAGAGATAGCACCAAGTaGGCAGGAGAGGTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: RDANTPAFQCWELSTWFTRDSTK*AGEVLW
Trigger: CCACAGGACCTCTCCTGCCCACTTGGTGCTATCTCT...CGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCAGTGCTCACCCGTGCTaGGTGGTCACTGGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: WRHPLSLLNSKSIPGFILSAHPC*VVTGRD
Trigger: ATCTCTTCCAGTGACCACCCAGCACGGGTGAGCACT...GAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACATTGCAGGCTCCAGGCTaGCCAGTGCTCACCCGTGCT +
Preference number: 4 (lower is better)
Translates to: RFDPLSTLDIKKVSVETTLQAPG*PVLTRA
Trigger: AGCACGGGTGAGCACTGGCCAGCCTGGAGCCTGCAA...TGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCAGAAGGAACTGACATaGAGGACAGTCTGTTCCACC +
Preference number: 4 (lower is better)
Translates to: WFHSHVRGQEVRGSSAPWQKELT*RTVCST
Trigger: GGTGGAACAGACTGTCCTCCATGTCAGTTCCTTCTG...CCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCCAGCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGGATGCAATACTGGCGTaGTGTGGAATGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SSRYVSQNPLHLSLTEKWDAILA*CGMRGW
Trigger: CCAGCCCCTCATTCCACACCACGCCAGTATTGCATC...CCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCGATGCAATACTGGCGTaGTGTGGAATGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: WRHPLSLLNSKSIPGFILDAILA*CGMRGW
Trigger: CCAGCCCCTCATTCCACACCACGCCAGTATTGCATC...GAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTGCTGCCCTCAGGATGTGTAGCTGCAGTAGATGGATGCAATACTGGCGTGGTGTGTAGCTGCAGTAGATaGATGCAATACTGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: VLPSGCVAAVDGCNTGVVCSCSR*MQYWRG
Trigger: ACCACGCCAGTATTGCATCCATCTACTGCAGCTACA...CACCACGCCAGTATTGCATCCATCTACTGCAGCTACACATCCTGAGGGCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCTGGGTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCGTTTTTCCATGGCTTTaGGATGCAACGGATTCTGCC +
Preference number: 4 (lower is better)
Translates to: PGLTTSGFPIKQGQEDSSVFPWL*DATDSA
Trigger: GGCAGAATCCGTTGCATCCCAAAGCCATGGAAAAAC...GGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAACCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355446.9
CDS-3UTR CCA 90 bp GTACATGCAGATGTCAGGAAATGGCCACCCACAAGTAGATACTCAGAGCCCCTCCTCCTCATCCTGGTCTaGGGAGGGCTTGTGATTTGT +
Preference number: 4 (lower is better)
Translates to: VHADVRKWPPTSRYSEPLLLILV*GGLVIC
Trigger: ACAAATCACAAGCCCTCCCCAGACCAGGATGAGGAG...GAGGGGCTCTGAGTATCTACTTGTGGGTGGCCATTTCCTGACATCTGCATGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440394.7
CDS-3UTR TCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTCTCACAGGAGGGAGGTaGTGCTCTCCAAATGCTATG +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSLTGGR*CSPNAM
Trigger: CATAGCATTTGGAGAGCATCACCTCCCTCCTGTGAG...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp CTAGGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCTCACAGGAGGGAGGTaGTGCTCTCCAAATGCTATG +
Preference number: 4 (lower is better)
Translates to: LGCRDNGLLSAEEWRWQTLTGGR*CSPNAM
Trigger: CATAGCATTTGGAGAGCATCACCTCCCTCCTGTGAG...AGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp CCTGGGTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCGGCTCCAGAAGGTCTTaGTGCTATTCATTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: PGLTTSGFPIKQGQEDSSGSRRS*CYSLKN
Trigger: GTTCTTCAATGAATAGCATCAAGACCTTCTGGAGCC...GGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAACCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GTTCTGCATTGTCCCGTTCACCTTTCTCTAACTCATCCTGAAGCTGCCCCCGGGGGCTCCAGAAGGTCTTaGTGCTATTCATTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: VLHCPVHLSLTHPEAAPGGSRRS*CYSLKN
Trigger: GTTCTTCAATGAATAGCATCAAGACCTTCTGGAGCC...CCCGGGGGCAGCTTCAGGATGAGTTAGAGAAAGGTGAACGGGACAATGCAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTAACTCATGGCCAATCTCAGCCTaGAGACCAGCCGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: ALANSCSSALSRSPFSNSWPISA*RPAAFF
Trigger: AAAGAAAGCGGCTGGTCTTCAGGCTGAGATTGGCCA...TGAGTTAGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355446.9
ENST00000542302.6
CDS-3UTR TCA 90 bp TGCGACAGACAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTGTGCTGTTTACTATCTaGGAACTGGTTTGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: CDRQAGLDEDSDLGRTSAVLFTI*ELVCEC
Trigger: ACACTCACAAACCAGTTCTCAGATAGTAAACAGCAC...AGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTGTCTGTCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCAGCCTGCAAGGATTTaGCCCGTTCTTTCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVQPARI*PVLSSC
Trigger: GCAGCTTGAAAGAACGGGTCAAATCCTTGCAGGCTG...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp CGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCACGCCTTGCAACAGGCTaGCTTTTTCCTTCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: RAPVPRSSLFLAPGLTTSRLATG*LFPSSL
Trigger: AAGACTTGAAGGAAAAAGTCAGCCTGTTGCAAGGCG...TGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCACATCTTTGTACCTGGTaGTCTCTCTCTCCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPHLCTW*SLSPSA
Trigger: AGCACTTGGAGAGAGAGATCACCAGGTACAAAGATG...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp AAAGCTGCAGGCGGGGACAACAGGGTCTCATATGTCAACTTTGTATGTTCTCTTGCTGAGAGCTGTCGTTaGGATTGTCCTCCCGTCGTC +
Preference number: 4 (lower is better)
Translates to: KAAGGDNRVSYVNFVCSLAESCR*DCPPVV
Trigger: GACGACGGGAGGACAATCTCAACGACAGCTCTCAGC...AAGAGAACATACAAAGTTGACATATGAGACCCTGTTGTCCCCGCCTGCAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACGCTGAGAGCTGTCGTTaGGATTGTCCTCCCGTCGTC +
Preference number: 4 (lower is better)
Translates to: TPQYDNVNSLKQERLVENAESCR*DCPPVV
Trigger: GACGACGGGAGGACAATCTCAACGACAGCTCTCAGC...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp TTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACATCCGCTGAGAGCTGTCGTTaGGATTGTCCTCCCGTCGTC +
Preference number: 4 (lower is better)
Translates to: FDPLSTLDIKKVSVETTSAESCR*DCPPVV
Trigger: GACGACGGGAGGACAATCTCAACGACAGCTCTCAGC...GGATGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp GCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTCTGTCCTGTAGCTGCTaGGAGCTGTCGTTGAGATTG +
Preference number: 4 (lower is better)
Translates to: AGMSHRIHYISPSLRSGLLSCSC*ELSLRL
Trigger: CAATCTCAACGACAGCTCTCAGCAGCTACAGGACAG...AAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTTGGAATGGGAGGATTTaGAGTGGTCATCCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTWNGRI*SGHPRS
Trigger: ACTACGAGGATGACCACTTCAAATCCTCCCATTCCA...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp CTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTGGAATGGGAGGATTTaGAGTGGTCATCCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: LVHWRHPLSLLNSKSIPGWNGRI*SGHPRS
Trigger: ACTACGAGGATGACCACTTCAAATCCTCCCATTCCA...ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGTGGAATGGGAGGATTTaGAGTGGTCATCCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLWNGRI*SGHPRS
Trigger: ACTACGAGGATGACCACTTCAAATCCTCCCATTCCA...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp CAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTAACACTCCTGCCTTTCAGCTAAGAGGGGCTGGATaGTCTGGTCTGGGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: QFFTLWWIKRDANTPAFQLRGAG*SGLGRA
Trigger: AGCCCTCCCCAGACCAGATCATCCAGCCCCTCTTAG...CTGAAAGGCAGGAGTGTTAGCATCTCGCTTTATCCACCATAACGTAAAGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCTGGTCTGCTATCTGCTaGAGAATGGCGTTGGCAAAC +
Preference number: 4 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFWSAIC*RMALAN
Trigger: GTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCA...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp TGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCATGGTCTGCTATCTGCTaGAGAATGGCGTTGGCAAAC +
Preference number: 4 (lower is better)
Translates to: CRDNGLLSAEEWRWQTPAWSAIC*RMALAN
Trigger: GTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCA...TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTACTCTTCCAGGGCGTTaGCCACTTGCTCTAGGATGT +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSTLPGR*PLALGC
Trigger: ACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGT...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp TATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACTCTTCCAGGGCGTTaGCCACTTGCTCTAGGATGT +
Preference number: 4 (lower is better)
Translates to: YLLKNGVGKLLQFCIVPFTLPGR*PLALGC
Trigger: ACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGT...GAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp TTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACATCCTCAGAGGACAGGAGGTaGGAGGCTCCTCTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: FDPLSTLDIKKVSVETTSSEDRR*EAPLLH
Trigger: ATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGA...GGATGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp GATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGTCAGAGGACAGGAGGTaGGAGGCTCCTCTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: DGRCRNGAGITLLQVSKLSEDRR*EAPLLH
Trigger: ATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGA...CAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp AAGGCTGTTATCACACCGCAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTGGCCGAGGAACAGAGTaGGGAAGGCTGCGACAGACA +
Preference number: 4 (lower is better)
Translates to: KAVITPQFFTLWWIKRDAGRGTE*GRLRQT
Trigger: TGTCTGTCGCAGCCTTCCTCACTCTGTTCCTCGGCC...AGCATCTCGCTTTATCCACCATAACGTAAAGAACTGCGGTGTGATAACAGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GGTGGCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGGCAATGCACGAGGCTaGGGTTCAGAGAAGACGAGT +
Preference number: 4 (lower is better)
Translates to: GGSSSERFDPLSTLDIKKGNARG*GSEKTS
Trigger: ACTCGTCTTCTCTGAACCTCAGCCTCGTGCATTGCC...CTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGAGGGCTTCCTCAACATGAAGCTGGCTaGATTCCACGAGGTACATGC +
Preference number: 4 (lower is better)
Translates to: DIGPGNASSQKQCHRGLPQHEAG*IPRGTC
Trigger: GCATGTACCTCGTGGAATTCAGCCAGCTTCATGTTG...AGGAAGCCCTCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTATCCACCGTGGCCCCGTaGAGGCTGTTATCACACCGC +
Preference number: 4 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVSTVAP*RLLSHR
Trigger: GCGGTGTGATAACAGCCTTCACGGGGCCACGGTGGA...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp ACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCCAGAGACCAGACAGATaGTATCGGTCCCGGAAATGC +
Preference number: 4 (lower is better)
Translates to: TMVCYLLKNGVGKLLQFCQRPDR*YRSRKC
Trigger: GCATTTCCGGGACCGATATCATCTGTCTGGTCTCTG...GCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440394.7
CDS-3UTR TCA 90 bp GAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGGCCACGTTTATTACTaGACTCCTAGCCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: EMLTLLPFSAGSFLHGLRGHVYY*TPSQPP
Trigger: TGGAGGCTGGCTAGGAGTTCAGTAATAAACGTGGCC...CCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTGCCCATATGAAACCATaGCCACTAGGAGAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: LSAEEWRWQTPAVLHCPVAHMKP*PLGEGH
Trigger: ATGCCCCTCTCCTAGTGGTCATGGTTTCATATGGGC...AACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440394.7
CDS-3UTR TCA 90 bp TCCAGCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGGTGCCCTCTTTATGGTaGCATTGGTTTGGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SSRYVSQNPLHLSLTEKWVPSLW*HWFGVQ
Trigger: CTGCACCCCAAACCAATGTCACCATAAAGAGGGCAC...CCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTGAGATACCTCATCAATaGTTCAATGAGTACCGGGGG +
Preference number: 4 (lower is better)
Translates to: LVHWRHPLSLLNSKSIPGEIPHQ*FNEYRG
Trigger: CCCCCGGTACTCATTGAATCATTGATGAGGTATCTC...ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGGAGATACCTCATCAATaGTTCAATGAGTACCGGGGG +
Preference number: 4 (lower is better)
Translates to: WFHSHVRGQEVRGSSAPWEIPHQ*FNEYRG
Trigger: CCCCCGGTACTCATTGAATCATTGATGAGGTATCTC...CCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATCCTGGCCTCGAACTCCTaGTCTCAGGTGATCCGCCTG +
Preference number: 4 (lower is better)
Translates to: KAPIVILEHSALWSIGGILASNS*SQVIRL
Trigger: CAGGCGGATCACCTGAGATCAGGAGTTCGAGGCCAG...GATGCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CTTGGGGTCAGCTTTCTGATTTGCAACATGAAGCTGGCTGAATTCCACGAGGTAGATTCTCCTGCCTCCTaGGTAGCTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: LGVSFLICNMKLAEFHEVDSPAS*VAGITG
Trigger: GCCTGTAATCCCAGCTACTCAGGAGGCAGGAGAATC...TACCTCGTGGAATTCAGCCAGCTTCATGTTGCAAATCAGAAAGCTGACCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCATTACTGGTATTTGCTaGCACAGGGTCCGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: WRHPLSLLNSKSIPGFILITGIC*HRVRWA
Trigger: AGCCCAGCGGACCCTGTGTCAGCAAATACCAGTAAT...GAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTTTTAAGACATTCCTTTaGGTGGTTCACGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTFKTFL*VVHVPS
Trigger: GGAGGGGACGTGAACCACTCAAAGGAATGTCTTAAA...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GTCTTGGTTCCACCGTGGCCCCGTGAAGGCTGTTATCACACCGCAGTTCTTTACACTGCCCCAATTCTCTaGATCACACAGACAATATCG +
Preference number: 4 (lower is better)
Translates to: VLVPPWPREGCYHTAVLYTAPIL*ITQTIS
Trigger: CGATATTGTCTGTGTGATTCAGAGAATTGGGGCAGT...GTAAAGAACTGCGGTGTGATAACAGCCTTCACGGGGCCACGGTGGAACCAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCGAAGCCAGAAGGAACTaGCATGGAGGACAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLEARRN*HGGQSV
Trigger: AACAGACTGTCCTCCATGTCAGTTCCTTCTGGCTTC...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGCCACGTTTAGCAACACTTCTCTTCTaGCGCATCAGGGAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: SESYKLHPLCPTARRPRLATLLF*RIREQS
Trigger: TGACTGCTCCCTGATGCGTCAGAAGAGAAGTGTTGC...TAAACGTGGCCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGTCACTTGCCTTGAGGTaGGACTTTCCAACTCAGCTA +
Preference number: 4 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLSLALR*DFPTQL
Trigger: TAGCTGAGTTGGAAAGTCTCACCTCAAGGCAAGTGA...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000546231.6
ENST00000611180.4
CDS-3UTR TCA 90 bp CTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTATAGGAAGCTGGTGGAGTGCTGAACTAAGCCTCTaGTTGGCTATGCCCATATAC +
Preference number: 4 (lower is better)
Translates to: LILPSRLVIVQVIGSWWSAELSL*LAMPIY
Trigger: GTATATGGGCATAGCCAATCAGAGGCTTAGTTCAGC...ACTCCACCAGCTTCCTATAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GTTCTGCATTGTCCCGTTCACCTTTCTCTAACTCATCCTGAAGCTGCCCCCGGGGTGATGCTCTCCAAATaGTATGGTGTCACTAGCAAC +
Preference number: 4 (lower is better)
Translates to: VLHCPVHLSLTHPEAAPGVMLSK*YGVTSN
Trigger: GTTGCTAGTGACACCATAGCATTTGGAGAGCATCAC...CCCGGGGGCAGCTTCAGGATGAGTTAGAGAAAGGTGAACGGGACAATGCAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp AAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGGTGATGCTCTCCAAATaGTATGGTGTCACTAGCAAC +
Preference number: 4 (lower is better)
Translates to: KQGQEDSSRALTTCSRMSVMLSK*YGVTSN
Trigger: GTTGCTAGTGACACCATAGCATTTGGAGAGCATCAC...CGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GCTGCCCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTTTGAAGAACTCAATTTaGTCTCCTTTACTTCCACAT +
Preference number: 4 (lower is better)
Translates to: AAPGSSSAAHSPKPPGHRLKNSI*SPLLPH
Trigger: ATGTGGAAGTAAAGGAGAGCAAATTGAGTTCTTCAA...ACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCGGGGGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp TGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGCCTGGATTGTCATCTaGATGTGCTGGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: CRDNGLLSAEEWRWQTPAAWIVI*MCWFSS
Trigger: GGAGGAAAACCAGCACATGCAGATGACAATCCAGGC...TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
CDS-3UTR GCA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCGCCTGGATTGTCATCTaGATGTGCTGGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLAWIVI*MCWFSS
Trigger: GGAGGAAAACCAGCACATGCAGATGACAATCCAGGC...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp GGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGTTCGCCAGTCCTGCTaGTACTATCCTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: GCRDNGLLSAEEWRWQTPVRQSC*YYPAET
Trigger: TGTTTCAGCAGGATAGTAGCAGCAGGACTGGCGAAC...AGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
CDS-3UTR GCA 90 bp AGGGTCACGCTATGTTGCCCTGGCTGGTGCTCTTTCAACCTCACATGTTCTTCAAAGGTTCGCCAGTCCTaGTGCTACTATCCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: RVTLCCPGWCSFNLTCSSKVRQS*CYYPAE
Trigger: TTCAGCAGGATAGTAGCAGCAGGACTGGCGAACCTT...TGAAGAACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACATAGCGTGACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTCTCCTCTGTCAGCTCTaGTACACAAGGTTCGCCAGT +
Preference number: 4 (lower is better)
Translates to: AGMSHRIHYISPSLRSGLLLCQL*YTRFAS
Trigger: ACTGGCGAACCTTGTGTAGCAGAGCTGACAGAGGAG...AAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GCGGCCTCACTCTGCAGAGGGTGCCTGCTGCATTGCAGTCTCTTCTCATCCTTCTTCTCAAACCTTCGATaGATCTCCTCTCTCAACATA +
Preference number: 4 (lower is better)
Translates to: AASLCRGCLLHCSLFSSFFSNLR*ISSLNI
Trigger: TATGTTGAGAGAGGAGATGCATCGAAGGTTTGAGAA...GAAGGATGAGAAGAGACTGCAATGCAGCAGGCACCCTCTGCAGAGTGAGGCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TCTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGGTTTCTAGCTTTGTCTaGAGGGCGAGTAGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: SGPLEASSQPVELQVHSWVSSFV*RASSSV
Trigger: CACAGAACTACTCGCCCTGCAGACAAAGCTAGAAAC...CCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp GTACATGCAGATGTCAGGAAATGGCCACCCACAAGTAGATACTCAGAGCCCCTCTTGGTGGTGTCAGCCTaGAAGGATTTGACCCGTTCT +
Preference number: 4 (lower is better)
Translates to: VHADVRKWPPTSRYSEPLLVVSA*KDLTRS
Trigger: AGAACGGGTCAAATCCTTGCAGGCTGACACCACCAA...GAGGGGCTCTGAGTATCTACTTGTGGGTGGCCATTTCCTGACATCTGCATGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGGGTCACGCTATGTTGCCCTGGCTGGTGCTCTTTCAACCTCACATGTTCTTCATTGGTGGTGTCAGCCTaGAAGGATTTGACCCGTTCT +
Preference number: 4 (lower is better)
Translates to: RVTLCCPGWCSFNLTCSSLVVSA*KDLTRS
Trigger: AGAACGGGTCAAATCCTTGCAGGCTGACACCACCAA...TGAAGAACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACATAGCGTGACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCTGTCCGCTCTTTCTCTaGAAGGGCCTCCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: YLLKNGVGKLLQFCIVPFCPLFL*KGLLQS
Trigger: ACTTTGGAGGAGGCCCTTGCAGAGAAAGAGCGGACA...GAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTTGTCCGCTCTTTCTCTaGAAGGGCCTCCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: EEWRWQTPAVLHCPVHLSCPLFL*KGLLQS
Trigger: ACTTTGGAGGAGGCCCTTGCAGAGAAAGAGCGGACA...AGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCTCATCTCTGTCCCTCTaGTCCTTTAAGCGTTCAATT +
Preference number: 4 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFSSLSL*SFKRSI
Trigger: AATTGAACGCTTAAAGGAGCAGAGGGACAGAGATGA...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp CGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCATCTGAAAGGTCGCCTTaGAACAGGCTGACTTTTTCC +
Preference number: 4 (lower is better)
Translates to: RAPVPRSSLFLAPGLTTSSERSP*NRLTFS
Trigger: GGAAAAAGTCAGCCTGTTGCAAGGCGACCTTTCAGA...TGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGTCTGAAAGGTCGCCTTaGAACAGGCTGACTTTTTCC +
Preference number: 4 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLSERSP*NRLTFS
Trigger: GGAAAAAGTCAGCCTGTTGCAAGGCGACCTTTCAGA...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp AAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGTCTGGCTTCCAATGCTaGCTCATGTGCCTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: KQGQEDSSRALTTCSRMSSGFQC*LMCLFQ
Trigger: TTGAAAAAGGCACATGAGGCAGCATTGGAAGCCAGA...CGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp CCTGGGTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCTCTGGCTTCCAATGCTaGCTCATGTGCCTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: PGLTTSGFPIKQGQEDSSSGFQC*LMCLFQ
Trigger: TTGAAAAAGGCACATGAGGCAGCATTGGAAGCCAGA...GGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAACCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTGGCTCTGGCTTCCAATaGTGCCTCATGTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: GPLEASSQPVELQVHSWFGSGFQ*CLMCLF
Trigger: AAAAAGGCACATGAGGCAGCATTGGAAGCCAGAGCC...AAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCGAGTCGATCAACTTCTaGCTGGGCCTTGCTAGATTC +
Preference number: 4 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLESINF*LGLARF
Trigger: GAATCTAGCAAGGCCCAGGCAGAAGTTGATCGACTC...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCGAGTCGATCAACTTCTaGCTGGGCCTTGCTAGATTC +
Preference number: 4 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFESINF*LGLARF
Trigger: GAATCTAGCAAGGCCCAGGCAGAAGTTGATCGACTC...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp CTGCCCTACAGCACGAAGGCCACGTTTATTACTGAACTCCTAGCCAGCCTCCAGCACCATTTCCCGCTCTaGAGTTATCTGTACACTTTC +
Preference number: 4 (lower is better)
Translates to: LPYSTKATFITELLASLQHHFPL*SYLYTF
Trigger: GAAAGTGTACAGATAACTGCAGAGCGGGAAATGGTG...CTGGAGGCTGGCTAGGAGTTCAGTAATAAACGTGGCCTTCGTGCTGTAGGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CTGCCCTACAGCACGAAGGCCACGTTTATTACTGAACTCCTAGCCAGCCTCCAGGTGTTTCCTTCTCTCTaGCCGAAGATTAGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: LPYSTKATFITELLASLQVFPSL*PKISQV
Trigger: CACTTGACTAATCTTCGGGCAGAGAGAAGGAAACAC...CTGGAGGCTGGCTAGGAGTTCAGTAATAAACGTGGCCTTCGTGCTGTAGGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGGCCAGAAGAGCTTCTTaGTTCATCTCCAGAACTTCC +
Preference number: 4 (lower is better)
Translates to: WFHSHVRGQEVRGSSAPWARRAS*FISRTS
Trigger: GGAAGTTCTGGAGATGAAGCAAGAAGCTCTTCTGGC...CCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp CTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTATAGGAAGCTGGTGGAGTGCCAGAAGAGCTTCTTaGTTCATCTCCAGAACTTCC +
Preference number: 4 (lower is better)
Translates to: LILPSRLVIVQVIGSWWSARRAS*FISRTS
Trigger: GGAAGTTCTGGAGATGAAGCAAGAAGCTCTTCTGGC...ACTCCACCAGCTTCCTATAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCAGCCAGAAGAGCTTCTTaGTTCATCTCCAGAACTTCC +
Preference number: 4 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPARRAS*FISRTS
Trigger: GGAAGTTCTGGAGATGAAGCAAGAAGCTCTTCTGGC...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCGTCTGCTGCTTAAGCTaGTGTACCAGACGATCCTTC +
Preference number: 4 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLVCCLS*CTRRSF
Trigger: GAAGGATCGTCTGGTACAGCAGCTTAAGCAGCAGAC...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp CTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTCGATTTTGCGTCTGCTaGTTAAGCTGCTGTACCAGA +
Preference number: 4 (lower is better)
Translates to: LVHWRHPLSLLNSKSIPGRFCVC*LSCCTR
Trigger: TCTGGTACAGCAGCTTAAGCAGCAGACGCAAAATCG...ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp GGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGGGACAAAAACTCCTGCAGTTCTaGATTGTCCCGTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: GQEDSSRALTTCSRMSGQKLLQF*IVPFTF
Trigger: AAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTT...TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp AAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGAAACTCCTGCAGTTCTaGATTGTCCCGTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: KQGQEDSSRALTTCSRMSKLLQF*IVPFTF
Trigger: AAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTT...CGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTGCGTTGGCAAACTCCTaGAGTTCTGCATTGTCCCGT +
Preference number: 4 (lower is better)
Translates to: AGMSHRIHYISPSLRSGLALANS*SSALSR
Trigger: ACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGC...AAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTAGCGTTGGCAAACTCCTaGAGTTCTGCATTGTCCCGT +
Preference number: 4 (lower is better)
Translates to: EWRWQTPAVLHCPVHLSLALANS*SSALSR
Trigger: ACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGC...TAGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp ACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCGCGTTGGCAAACTCCTaGAGTTCTGCATTGTCCCGT +
Preference number: 4 (lower is better)
Translates to: TMVCYLLKNGVGKLLQFCALANS*SSALSR
Trigger: ACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGC...GCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTGCGTTGGCAAACTCCTaGAGTTCTGCATTGTCCCGT +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSALANS*SSALSR
Trigger: ACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGC...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCGTCGGGACAATGGTCTaGTATCTGCTGAAGAATGGC +
Preference number: 4 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLVGTMV*YLLKNG
Trigger: GCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCGTTTGTAGTGTTTGGTaGCAAGAAGGTTCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFVCSVW*QEGSGH
Trigger: GTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp TTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTAGCCATCGTGAGGCCTaGTCACAGCTCCCCGGTACA +
Preference number: 4 (lower is better)
Translates to: FQCWELSTWFTGTAMNRISHREA*SQLPGT
Trigger: TGTACCGGGGAGCTGTGAGCAGGCCTCACGATGGCT...AATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGCCTTGGGAGAACGAGTaGTCCCAAGCCATCGTGAGG +
Preference number: 4 (lower is better)
Translates to: DGRCRNGAGITLLQVSKLPWENE*SQAIVR
Trigger: CCTCACGATGGCTTGGGAGCACTCGTTCTCCCAAGG...CAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp GTACATGCAGATGTCAGGAAATGGCCACCCACAAGTAGATACTCAGAGCCCCTCTGTTGCCCTGGCTGGTaGTCTTTCAACCTCACATGT +
Preference number: 4 (lower is better)
Translates to: VHADVRKWPPTSRYSEPLCCPGW*SFNLTC
Trigger: ACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACA...GAGGGGCTCTGAGTATCTACTTGTGGGTGGCCATTTCCTGACATCTGCATGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACAAAAGCTCAGGACACGGGTaGTGGCAAGGCAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: STWFTGTAMNRIEVTDHKSSGHG*WQGRQP
Trigger: AGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCT...TTTGTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCGAAGGTTCCAGGCAATaGACGAGGCTGAGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: WRHPLSLLNSKSIPGFILEGSRQ*TRLRFR
Trigger: TCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTC...GAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp ATGAGACACTCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGGGAGATGTGAGTGTCTaGTGGGTTCTGGTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: MRHSESYKLHPLCPTARRGDVSV*WVLVVE
Trigger: CTCTACCACCAGAACCCAGCAGACACTCACATCTCC...CCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGAGTGTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GGTGGCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGTTACTATCTAACCCCTaGACCCCTCTCTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GGSSSERFDPLSTLDIKKLLSNP*TPLWPA
Trigger: GGCTGGCCAGAGAGGGGTGCAGGGGTTAGATAGTAA...CTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACACCTTACTATCTAACCCCTaGACCCCTCTCTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: PQYDNVNSLKQERLVENTLLSNP*TPLWPA
Trigger: GGCTGGCCAGAGAGGGGTGCAGGGGTTAGATAGTAA...GGTGTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCTAGTGTGATGGGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACAGGCATGGCCTCGCCTaGTGTCTTGGTTCCACCGTG +
Preference number: 4 (lower is better)
Translates to: PSVMGVGHLVKCWFNDLDRHGLA*CLGSTV
Trigger: CACGGTGGAACCAAGACAGCAGGCGAGGCCATGCCT...GTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCCCATCACACTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATATCGGTCCCGGAAATaGTTCTTCTCAGAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPYRSRK*FFSEAV
Trigger: CACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATA...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CTTGGGGTCAGCTTTCTGATTTGCAACATGAAGCTGGCTGAATTCCACGAGGTACTAGCCAGCCTCCAGTaGCCAAGAACGGTCAAGAAG +
Preference number: 4 (lower is better)
Translates to: LGVSFLICNMKLAEFHEVLASLQ*PRTVKK
Trigger: CTTCTTGACCGTTCTTGGGCACTGGAGGCTGGCTAG...TACCTCGTGGAATTCAGCCAGCTTCATGTTGCAAATCAGAAAGCTGACCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCACCCACTCTTCTTCGTaGCCTCTTTATGGTGACATT +
Preference number: 4 (lower is better)
Translates to: SFSCQRTGGERLLCSMALTHSSS*PLYGDI
Trigger: AATGTCACCATAAAGAGGGCACGAAGAAGAGTGGGT...GAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGGGTGCCTGCTGCATTaGAGTCTCTTCTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: EMLTLLPFSAGSFLHGLRGCLLH*SLFSSF
Trigger: GAAGGATGAGAAGAGACTGCAATGCAGCAGGCACCC...CCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AAGGCTGTTATCACACCGCAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTGCCAGTGCTCACCCGTaGTGGGTGGTCACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: KAVITPQFFTLWWIKRDAASAHP*WVVTGR
Trigger: TCTTCCAGTGACCACCCAGCACGGGTGAGCACTGGC...AGCATCTCGCTTTATCCACCATAACGTAAAGAACTGCGGTGTGATAACAGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGGCTCCTCCACTAAAGTaGAACACTTCTCTTCTGACG +
Preference number: 4 (lower is better)
Translates to: WFHSHVRGQEVRGSSAPWAPPLK*NTSLLT
Trigger: CGTCAGAAGAGAAGTGTTGCACTTTAGTGGAGGAGC...CCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGCTCCTCCACTAAAGTaGAACACTTCTCTTCTGACG +
Preference number: 4 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLAPPLK*NTSLLT
Trigger: CGTCAGAAGAGAAGTGTTGCACTTTAGTGGAGGAGC...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACCTACAAGGGGGCAGGTaGTCCTCAGCTCCTCCACTA +
Preference number: 4 (lower is better)
Translates to: TPQYDNVNSLKQERLVENLQGGR*SSAPPL
Trigger: TAGTGGAGGAGCTGAGGAGCACCTGCCCCCTTGTAG...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGCCACGTTTAGCCTCTGATTGGCTATaGCCATATACCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SESYKLHPLCPTARRPRLASDWL*PYTLLL
Trigger: GAGGAGGAGGGTATATGGGCATAGCCAATCAGAGGC...TAAACGTGGCCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440394.7
CDS-3UTR GCA 90 bp GTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCGCCTCTGATTGGCTATaGCCATATACCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: VCYLLKNGVGKLLQFCIVASDWL*PYTLLL
Trigger: GAGGAGGAGGGTATATGGGCATAGCCAATCAGAGGC...GACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTGCCTCTGATTGGCTATaGCCATATACCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVASDWL*PYTLLL
Trigger: GAGGAGGAGGGTATATGGGCATAGCCAATCAGAGGC...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGTACATGTGAGGTGTCTCTATaGCTACAAGTTGGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: GGSGGLGHGRGLSGVQCTCEVSL*LQVGLR
Trigger: CCTTAAACCAACTTGTAGCCATAGAGACACCTCACA...TGTACATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTGGGCACTTCCATACATaGTTGCAAGGTCAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GPLEASSQPVELQVHSWFGHFHT*LQGQER
Trigger: CCTTTCCTGACCTTGCAACCATGTATGGAAGTGCCC...AAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGAACGCCCAGGGCTCTaGCTGCTCGGCTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFERPGL*LLGSTF
Trigger: GAAGGTGGAGCCGAGCAGCCAGAGCCCTGGGCGTTC...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCATGTCATCCCTCCCGTACTGTTaGTTCGACGGTGACCCAAGC +
Preference number: 4 (lower is better)
Translates to: HPLSLLNSKSIPGFILMSSLPYC*FDGDPS
Trigger: GCTTGGGTCACCGTCGAACCAACAGTACGGGAGGGA...TGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTGGGAGTGAGGTACAGTaGATGCCATACTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVGSEVQ*MPYSQE
Trigger: CTCCTGTGAGTATGGCATCCACTGTACCTCACTCCC...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp TGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGTTCCTTCTTCAGCTCTaGGCTCCAGAAGGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: WFHSHVRGQEVRGSSAPWFLLQL*APEGLD
Trigger: ATCAAGACCTTCTGGAGCCCAGAGCTGAAGAAGGAA...CCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp TCTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTCCTTCTTCAGCTCTaGGCTCCAGAAGGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: SGPLEASSQPVELQVHSWFLLQL*APEGLD
Trigger: ATCAAGACCTTCTGGAGCCCAGAGCTGAAGAAGGAA...CCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGTTCCTTCTTCAGCTCTaGGCTCCAGAAGGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLFLLQL*APEGLD
Trigger: ATCAAGACCTTCTGGAGCCCAGAGCTGAAGAAGGAA...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp TGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCATCATCCTGGAGAGCCTaGATTGTCATCTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: CRDNGLLSAEEWRWQTPASSWRA*IVICMC
Trigger: GCACATGCAGATGACAATCCAGGCTCTCCAGGATGA...TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
CDS-3UTR CCA 90 bp CCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACTCATCCTGGAGAGCCTaGATTGTCATCTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: PAFQCWELSTWFTGTAMNSSWRA*IVICMC
Trigger: GCACATGCAGATGACAATCCAGGCTCTCCAGGATGA...GTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTCATCCTGGAGAGCCTaGATTGTCATCTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLSSWRA*IVICMC
Trigger: GCACATGCAGATGACAATCCAGGCTCTCCAGGATGA...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp CGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAATCCGCAATTCATCCTaGAGAGCCTGGATTGTCATC +
Preference number: 4 (lower is better)
Translates to: RAPVPRSSLFLAPGLTTSIRNSS*RAWIVI
Trigger: GATGACAATCCAGGCTCTCCAGGATGAATTGCGGAT...TGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp GAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTAGAAGAAACAGCTCTTTaGCCTGCCGCTCATGCTCAG +
Preference number: 4 (lower is better)
Translates to: EWRWQTPAVLHCPVHLSLEETAL*PAAHAQ
Trigger: CTGAGCATGAGCGGCAGGCCAAAGAGCTGTTTCTTC...TAGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
CDS-3UTR CCA 90 bp GCAGTTGTATGCCCATATGAAACCATGACCACTAGGAGAGGGGCATGGAATGACGAAGAAACAGCTCTTTaGCCTGCCGCTCATGCTCAG +
Preference number: 4 (lower is better)
Translates to: AVVCPYETMTTRRGAWNDEETAL*PAAHAQ
Trigger: CTGAGCATGAGCGGCAGGCCAAAGAGCTGTTTCTTC...GTCATTCCATGCCCCTCTCCTAGTGGTCATGGTTTCATATGGGCATACAACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCGAAGAAACAGCTCTTTaGCCTGCCGCTCATGCTCAG +
Preference number: 4 (lower is better)
Translates to: VCYLLKNGVGKLLQFCIVEETAL*PAAHAQ
Trigger: CTGAGCATGAGCGGCAGGCCAAAGAGCTGTTTCTTC...GACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
CDS-3UTR CCA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGTTACTATCTGAGAACTaGTTTGTGAGTGTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPLLSEN*FVSVSS
Trigger: GCTAGAAACACTCACAAACCAGTTCTCAGATAGTAA...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCACTCATCTCTGGACTaGCTCTGGCTTCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: VCYLLKNGVGKLLQFCIVHSSLD*LWLPML
Trigger: CAGCATTGGAAGCCAGAGCCAGTCCAGAGATGAGTG...GACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGTCGGTCACTCATCTCTaGACTGGCTCTGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: RDANTPAFQCWELSTWFTSVTHL*TGSGFQ
Trigger: TTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACCGA...CGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TATGCTAGAAGAAGGTTCCAGGCAATGCACGAGGCTGAGGTTCAGAGAAGACGATCGGTCACTCATCTCTaGACTGGCTCTGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: YARRRFQAMHEAEVQRRRSVTHL*TGSGFQ
Trigger: TTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACCGA...TCGTCTTCTCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTCTTCTAGCATA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTCGGTCACTCATCTCTaGACTGGCTCTGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSSVTHL*TGSGFQ
Trigger: TTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACCGA...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTATAGGAAGCTGGTGGAGTCGATCAACTTCTGCCTaGGCCTTGCTAGATTCATCT +
Preference number: 4 (lower is better)
Translates to: LILPSRLVIVQVIGSWWSRSTSA*ALLDSS
Trigger: AGATGAATCTAGCAAGGCCCAGGCAGAAGTTGATCG...ACTCCACCAGCTTCCTATAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GTGCTGCCCTCAGGATGTGTAGCTGCAGTAGATGGATGCAATACTGGCGTGGTGTTTCAGCATTGGTCCTaGCTGATTCCTCTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: VLPSGCVAAVDGCNTGVVFQHWS*LIPLVL
Trigger: TAGCACAAGAGGAATCAGCCAGGACCAATGCTGAAA...CACCACGCCAGTATTGCATCCATCTACTGCAGCTACACATCCTGAGGGCAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTTTCAGCATTGGTCCTaGCTGATTCCTCTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: SFSCQRTGGERLLCSMALFQHWS*LIPLVL
Trigger: TAGCACAAGAGGAATCAGCCAGGACCAATGCTGAAA...GAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp TTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTGCTTTACCTTCTCCATaGCCATCAGTAACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: FPIKQGQEDSSRALTTCSALPSP*PSVTPP
Trigger: TGGAGGAGTTACTGATGGCCATGGAGAAGGTAAAGC...AGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp TCTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGGCTTTACCTTCTCCATaGCCATCAGTAACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SGPLEASSQPVELQVHSWALPSP*PSVTPP
Trigger: TGGAGGAGTTACTGATGGCCATGGAGAAGGTAAAGC...CCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGCTTTACCTTCTCCATaGCCATCAGTAACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLALPSP*PSVTPP
Trigger: TGGAGGAGTTACTGATGGCCATGGAGAAGGTAAAGC...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGACAGCTTTGCTTTCATaGATTCTAGTTCCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: PRRIRGSRSWQRVVRCPMTALLS*ILVPAL
Trigger: TAAAGCAGGAACTAGAATCCATGAAAGCAAAGCTGT...CATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp TATGCTAGAAGAAGGTTCCAGGCAATGCACGAGGCTGAGGTTCAGAGAAGACGACCAGAGACTGCTGGGTaGAGGACAGCTTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: YARRRFQAMHEAEVQRRRPETAG*RTALLS
Trigger: TGAAAGCAAAGCTGTCCTCCACCCAGCAGTCTCTGG...TCGTCTTCTCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTCTTCTAGCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp ACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCCCAGAGACTGCTGGGTaGAGGACAGCTTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: TMVCYLLKNGVGKLLQFCPETAG*RTALLS
Trigger: TGAAAGCAAAGCTGTCCTCCACCCAGCAGTCTCTGG...GCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp AGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTCCAGAGACTGCTGGGTaGAGGACAGCTTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: RMALANSCSSALSRSPFSPETAG*RTALLS
Trigger: TGAAAGCAAAGCTGTCCTCCACCCAGCAGTCTCTGG...AGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACACCTCTGCCAGAGACTGCTaGGTGGAGGACAGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: PQYDNVNSLKQERLVENTSARDC*VEDSFA
Trigger: AGCAAAGCTGTCCTCCACCCAGCAGTCTCTGGCAGA...GGTGTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp GAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTAGTTCTAAGAGGGGCTaGATGATCTGGTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: EEWRWQTPAVLHCPVHLSSSKRG*MIWSGE
Trigger: CTCCCCAGACCAGATCATCCAGCCCCTCTTAGAACT...AGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355446.9
CDS-3UTR CCA 90 bp TGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTATAGGAAGCTGGTaGAGTGAGTCCACGGAGGAT +
Preference number: 4 (lower is better)
Translates to: CRDNGLLSAEEWRWQTPAVIGSW*SESTED
Trigger: ATCCTCCGTGGACTCACTCCACCAGCTTCCTATAAC...TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GTACATGCAGATGTCAGGAAATGGCCACCCACAAGTAGATACTCAGAGCCCCTCCAAGTTATAGGAAGCTaGTGGAGTGAGTCCACGGAG +
Preference number: 4 (lower is better)
Translates to: VHADVRKWPPTSRYSEPLQVIGS*WSESTE
Trigger: CTCCGTGGACTCACTCCACCAGCTTCCTATAACTTG...GAGGGGCTCTGAGTATCTACTTGTGGGTGGCCATTTCCTGACATCTGCATGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGTCTTTTCTTGGCTCCTaGGTTGACTACCTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLSFLGS*VDYLRL
Trigger: AAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGA...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTCTTTTCTTGGCTCCTaGGTTGACTACCTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: LVHWRHPLSLLNSKSIPGSFLGS*VDYLRL
Trigger: AAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGA...ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp TTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTCATCTTCTTGTTAACTaGCCGAGGAACAGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: FPIKQGQEDSSRALTTCSHLLVN*PRNRVR
Trigger: CCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATG...AGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000588412.5
CDS-3UTR CCA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCACATCTTCTTGTTAACTaGCCGAGGAACAGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPHLLVN*PRNRVR
Trigger: CCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATG...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp AGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACAACGGGCATCTGTTACTaGGGCAAAGCTGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: RFDPLSTLDIKKVSVETTTGICY*GKAAGG
Trigger: CCCGCCTGCAGCTTTGCCCCAGTAACAGATGCCCGT...TGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACAGGCAGGCAGCCTCTTaGAGGTGTTCAGGGGAAACC +
Preference number: 4 (lower is better)
Translates to: TPQYDNVNSLKQERLVENRQAAS*RCSGET
Trigger: GGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCT...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGAACTTCAGCAGCCACTaGGCTGCAGGAGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVNFSSH*AAGAQD
Trigger: GTCCTGAGCTCCTGCAGCCCAGTGGCTGCTGAAGTT...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AAAGCTGCAGGCGGGGACAACAGGGTCTCATATGTCAACTTTGTATGTTCTCTTGTGGTGGGAAGTTCCTaGACTGATGGGGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: KAAGGDNRVSYVNFVCSLVVGSS*TDGAVL
Trigger: CAGCACAGCCCCATCAGTCCAGGAACTTCCCACCAC...AAGAGAACATACAAAGTTGACATATGAGACCCTGTTGTCCCCGCCTGCAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GGTGGCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGACAGTCAAGGGCTGGTaGTGGGAAGTTCCTGGACTG +
Preference number: 4 (lower is better)
Translates to: GGSSSERFDPLSTLDIKKTVKGW*WEVPGL
Trigger: CAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGT...CTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCGGGACAGTCAAGGGCTaGTGGTGGGAAGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGGTVKG*WWEVPG
Trigger: TCCAGGAACTTCCCACCACCAGCCCTTGACTGTCCC...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp ACACACCTTAAGATCGGGGAGGGGAAGGACATGCTATTTACTGCTTCAACTCCACCTCTCTGGCCAGCCTaGCTATCAGGAAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: THLKIGEGKDMLFTASTPPLWPA*LSGSIS
Trigger: TGAGATGCTTCCTGATAGCCAGGCTGGCCAGAGAGG...TGGAGTTGAAGCAGTAAATAGCATGTCCTTCCCCTCCCCGATCTTAAGGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCATGCAGTATTAGGCACACTGAGCTAGAACCCACGTCGGGTGAGGGTGGTTATTGGGAGCTTTCTACATaGTTTACGGGCACTGCAATG +
Preference number: 4 (lower is better)
Translates to: PCSIRHTELEPTSGEGGYWELST*FTGTAM
Trigger: CATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCA...ATAACCACCCTCACCCGACGTGGGTTCTAGCTCAGTGTGCCTAATACTGCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGCCTGCCTTTCAGTGCTaGGAGCTTTCTACATGGTTT +
Preference number: 4 (lower is better)
Translates to: VGTMVCYLLKNGVGKLLQPAFQC*ELSTWF
Trigger: AAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG...CTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355446.9
ENST00000440394.7
CDS-3UTR CCA 90 bp TGGGACAGTCAAGGGCTGGTGGTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGTTCTTTACGTTATGGTaGATAAAGCGAGATGCTAAC +
Preference number: 4 (lower is better)
Translates to: WDSQGLVVGSSWTDGAVLFFTLW*IKRDAN
Trigger: GTTAGCATCTCGCTTTATCCACCATAACGTAAAGAA...CAGCACAGCCCCATCAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CTTCCTCCTCAGTTCCGAACCCAGGCAGGTGAAGAGGAGGCCAGGAGCAGATGTATGAGAAGCTCACACTaGGCTTCTTCAGTTACAAAA +
Preference number: 4 (lower is better)
Translates to: LPPQFRTQAGEEEARSRCMRSSH*ASSVTK
Trigger: TTTTGTAACTGAAGAAGCCCAGTGTGAGCTTCTCAT...ACATCTGCTCCTGGCCTCCTCTTCACCTGCCTGGGTTCGGAACTGAGGAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGCCATCTTGGCCAGGCTaGCCTCGAACTCCTGATCTC +
Preference number: 4 (lower is better)
Translates to: RQSKMADVETVLESHFFKPSWPG*PRTPDL
Trigger: GAGATCAGGAGTTCGAGGCCAGCCTGGCCAAGATGG...CTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTCTCTCACTCTGGGGGTaGGTGAGCCCGCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: FQCWELSTWFTGTAMNRILSLWG*VSPQVP
Trigger: AGGAACTTGCGGGCTCACCCACCCCCAGAGTGAGAG...AATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCTAGTGTGATGGGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACCCTCTTCTCTCACTCTaGGGGTGGGTGAGCCCGCAA +
Preference number: 4 (lower is better)
Translates to: PSVMGVGHLVKCWFNDLDPLLSL*GWVSPQ
Trigger: TTGCGGGCTCACCCACCCCCAGAGTGAGAGAAGAGG...GTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCCCATCACACTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTAACACTCCTGCCTTTCAGCCTCTTCTCTCACTCTaGGGGTGGGTGAGCCCGCAA +
Preference number: 4 (lower is better)
Translates to: QFFTLWWIKRDANTPAFQPLLSL*GWVSPQ
Trigger: TTGCGGGCTCACCCACCCCCAGAGTGAGAGAAGAGG...CTGAAAGGCAGGAGTGTTAGCATCTCGCTTTATCCACCATAACGTAAAGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTGCACGTGCATCCCAGACACCACCATGGAGGCTGCTACTGTTACCAAAAGGAACCAAATGCCAGTGGATaGGCGGCTCAGAAACATTTA +
Preference number: 4 (lower is better)
Translates to: VHVHPRHHHGGCYCYQKEPNASG*AAQKHL
Trigger: TAAATGTTTCTGAGCCGCCCATCCACTGGCATTTGG...TTCCTTTTGGTAACAGTAGCAGCCTCCATGGTGGTGTCTGGGATGCACGTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGAAATCCAAATGCCAGTaGATGGGCGGCTCAGAAACA +
Preference number: 4 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLKSKCQ*MGGSET
Trigger: TGTTTCTGAGCCGCCCATCCACTGGCATTTGGATTT...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTACATGCAGATGTCAGGAAATGGCCACCCACAAGTAGATACTCAGAGCCCCTCGGAGGAACAGGACTCTaGCAGCAAATCCAAATGCCA +
Preference number: 4 (lower is better)
Translates to: VHADVRKWPPTSRYSEPLGGTGL*QQIQMP
Trigger: TGGCATTTGGATTTGCTGCCAGAGTCCTGTTCCTCC...GAGGGGCTCTGAGTATCTACTTGTGGGTGGCCATTTCCTGACATCTGCATGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTGGAGAACACCTCACACCATCTTCTTGTTAACTGGCCGAGGAACAGAGTGAGGGGAGGAACAGGACTCTaGCAGCAAATCCAAATGCCA +
Preference number: 4 (lower is better)
Translates to: VENTSHHLLVNWPRNRVRGGTGL*QQIQMP
Trigger: TGGCATTTGGATTTGCTGCCAGAGTCCTGTTCCTCC...CCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGGTGTTCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCATGTCAAACAGGAGGGCGGGATaGTTCTGGGAGGAACAGGAC +
Preference number: 4 (lower is better)
Translates to: HPLSLLNSKSIPGFILMSNRRAG*FWEEQD
Trigger: GTCCTGTTCCTCCCAGAACCATCCCGCCCTCCTGTT...TGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCTACGTCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCAACAGGAGGGCGGGATaGTTCTGGGAGGAACAGGAC +
Preference number: 4 (lower is better)
Translates to: ATSLTMPIPSLICSLGVSNRRAG*FWEEQD
Trigger: GTCCTGTTCCTCCCAGAACCATCCCGCCCTCCTGTT...GCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGACGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTGGAGAACACCTCACACCATCTTCTTGTTAACTGGCCGAGGAACAGAGTGAGGAGACATTCCTTTGAGTaGTTCACGTCCCCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: VENTSHHLLVNWPRNRVRRHSFE*FTSPPE
Trigger: CTCAGGAGGGGACGTGAACCACTCAAAGGAATGTCT...CCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGGTGTTCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTAAAGAAGAGAGGAGGTaGGATGGGACAAAAACCCGC +
Preference number: 4 (lower is better)
Translates to: GPLEASSQPVELQVHSWFKEERR*DGTKTR
Trigger: GCGGGTTTTTGTCCCATCCCACCTCCTCTCTTCTTT...AAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CAGACAGATGATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGAAGAGATAGCACCAAGTaGGCAGGAGAGGTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: QTDDIGPGNASSQKQCHRRDSTK*AGEVLW
Trigger: CCACAGGACCTCTCCTGCCCACTTGGTGCTATCTCT...TCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATCATCTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCATGTCATGTGGAATGAGGGGCTaGACCCAGAGGGCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: HPLSLLNSKSIPGFILMSCGMRG*TQRACF
Trigger: AAAGCAGGCCCTCTGGGTCCAGCCCCTCATTCCACA...TGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCAATACTGGCGTGGTGTaGAATGAGGGGCTGGACCCA +
Preference number: 4 (lower is better)
Translates to: AERQSKMADVETVLESHFNTGVV*NEGLDP
Trigger: TGGGTCCAGCCCCTCATTCCACACCACGCCAGTATT...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GGTGGCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGAATACTGGCGTGGTGTaGAATGAGGGGCTGGACCCA +
Preference number: 4 (lower is better)
Translates to: GGSSSERFDPLSTLDIKKNTGVV*NEGLDP
Trigger: TGGGTCCAGCCCCTCATTCCACACCACGCCAGTATT...CTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGCAGGCCAGAGTGGGTaGTGCTGCCCTCAGGATGTG +
Preference number: 4 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVAGQSG*CCPQDV
Trigger: CACATCCTGAGGGCAGCACCACCCACTCTGGCCTGC...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCAGTTGTATGCCCATATGAAACCATGACCACTAGGAGAGGGGCATGGAATGACTCCCAGACACCACCATaGAGGCTGCTACTGTTACCA +
Preference number: 4 (lower is better)
Translates to: AVVCPYETMTTRRGAWNDSQTPP*RLLLLP
Trigger: TGGTAACAGTAGCAGCCTCCATGGTGGTGTCTGGGA...GTCATTCCATGCCCCTCTCCTAGTGGTCATGGTTTCATATGGGCATACAACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTAACTCACTCCTCATCCTGGTCTaGGGAGGGCTTGTGATTTGT +
Preference number: 4 (lower is better)
Translates to: ALANSCSSALSRSPFSNSLLILV*GGLVIC
Trigger: ACAAATCACAAGCCCTCCCCAGACCAGGATGAGGAG...TGAGTTAGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR CAA 72 bp CAGCCTCCAGTGCCCAAGAACGGTCAAGAAGATTCCTaGCTGTTCACAGAGACCAGACAGATGATATCGGTC +
Preference number: 4 (lower is better)
Translates to: QPPVPKNGQEDS*LFTETRQMISV
Trigger: GACCGATATCATCTGTCTGGTCTCTGTGAACAGCAAGGAATCTTCTTGACCGTTCTTGGGCACTGGAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR CAA 72 bp CTCTGCTTGGCTCTTTCCTCAAAGACTCTGAGGGTCTaGACACCGGGCCTACACTCAAGTAACATGGTCAAC +
Preference number: 4 (lower is better)
Translates to: LCLALSSKTLRV*TPGLHSSNMVN
Trigger: GTTGACCATGTTACTTGAGTGTAGGCCCGGTGTCAAGACCCTCAGAGTCTTTGAGGAAAGAGCCAAGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CAA 72 bp AGAGGAGGCCAGGAGCAGATGTTAAATTACTGGTATTaGCTGACACAGGGTCCGCTGGGCTTGAGAAATGCC +
Preference number: 4 (lower is better)
Translates to: RGGQEQMLNYWY*LTQGPLGLRNA
Trigger: GGCATTTCTCAAGCCCAGCGGACCCTGTGTCAGCAAATACCAGTAATTTAACATCTGCTCCTGGCCTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTAAAATGGGAACCTTGTaGGGTGTCTCTATGGCTACA +
Preference number: 4 (lower is better)
Translates to: LVHWRHPLSLLNSKSIPGKMGTL*GVSMAT
Trigger: TGTAGCCATAGAGACACCTCACAAGGTTCCCATTTT...ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp CTAACTCATCCTGAAGCTGCCCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGAGGTCAGGAAAGGTGTaGGCAGAAAATCAACAACAA +
Preference number: 4 (lower is better)
Translates to: LTHPEAAPGSSSAAHSPKRSGKV*AENQQQ
Trigger: TTGTTGTTGATTTTCTGCTCACACCTTTCCTGACCT...CTTGGGAGAATGAGCTGCAGAAGATGACCCGGGGGCAGCTTCAGGATGAGTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GTTCTGCATTGTCCCGTTCACCTTTCTCTAACTCATCCTGAAGCTGCCCCCGGGGCTTTTAGGTGTTTCTaGACCCACATTTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: VLHCPVHLSLTHPEAAPGAFRCF*THIFMV
Trigger: GACCATGAAAATGTGGGTTCAGAAACACCTAAAAGC...CCCGGGGGCAGCTTCAGGATGAGTTAGAGAAAGGTGAACGGGACAATGCAGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp CTAACTCATCCTGAAGCTGCCCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGGCTTTTAGGTGTTTCTaGACCCACATTTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: LTHPEAAPGSSSAAHSPKAFRCF*THIFMV
Trigger: GACCATGAAAATGTGGGTTCAGAAACACCTAAAAGC...CTTGGGAGAATGAGCTGCAGAAGATGACCCGGGGGCAGCTTCAGGATGAGTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCGTGTCTGCAGATCCATaGTTGTGTTATCTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLVSADP*LCYLSP
Trigger: AGGCGAGAGATAACACAATCATGGATCTGCAGACAC...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GTGGAGAACACCTCACACCATCTTCTTGTTAACTGGCCGAGGAACAGAGTGAGGTTTAGGGTCTGCTTTTaGGTCTCAATACGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VENTSHHLLVNWPRNRVRFRVCF*VSIRSS
Trigger: GGAGCTGCGTATTGAGACTCAAAAGCAGACCCTAAA...CCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGGTGTTCTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTCAGCTCCTCCCATTaGGCCTCTTTCGAACTTAGT +
Preference number: 4 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLFSSSH*ASFELS
Trigger: ACTAAGTTCGAAAGAGGCTCAATGGGAGGAGCTGAA...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000542302.6
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp TTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGGTGCTGTTTACTATCTaGGAACTGGTTTGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: LTTSGFPIKQGQEDSSRAVLFTI*ELVCEC
Trigger: ACACTCACAAACCAGTTCTCAGATAGTAAACAGCAC...CGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
CDS-3UTR TCA 90 bp GTACATGCAGATGTCAGGAAATGGCCACCCACAAGTAGATACTCAGAGCCCCTCCATCCAACATGTCCTTaGGGTCATGTATCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: VHADVRKWPPTSRYSEPLHPTCP*GHVSLQ
Trigger: CTGGAGAGATACATGACCTCAAGGACATGTTGGATG...GAGGGGCTCTGAGTATCTACTTGTGGGTGGCCATTTCCTGACATCTGCATGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCACATCCAACATGTCCTTaGGGTCATGTATCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: CRDNGLLSAEEWRWQTPAHPTCP*GHVSLQ
Trigger: CTGGAGAGATACATGACCTCAAGGACATGTTGGATG...TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCCAGCCTGCAAGGATTTaGCCCGTTCTTTCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: AERQSKMADVETVLESHFQPARI*PVLSSC
Trigger: GCAGCTTGAAAGAACGGGTCAAATCCTTGCAGGCTG...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp TATGCTAGAAGAAGGTTCCAGGCAATGCACGAGGCTGAGGTTCAGAGAAGACGAGTCCTTTTTCAGTCCTaGGGATGCCAGAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: YARRRFQAMHEAEVQRRRVLFQS*GCQRRS
Trigger: GCTTCTTCTCTGGCATCCTCAGGACTGAAAAAGGAC...TCGTCTTCTCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTCTTCTAGCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCGTCCTTTTTCAGTCCTaGGGATGCCAGAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: VCYLLKNGVGKLLQFCIVVLFQS*GCQRRS
Trigger: GCTTCTTCTCTGGCATCCTCAGGACTGAAAAAGGAC...GACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCCATCTTTGTACCTGGTaGTCTCTCTCTCCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLHLCTW*SLSPSA
Trigger: AGCACTTGGAGAGAGAGATCACCAGGTACAAAGATG...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp CTAACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGTTCTCTAACTCATCCTaGAGCTGCCCCCGGGTCATC +
Preference number: 4 (lower is better)
Translates to: LTPQYDNVNSLKQERLVEFSNSS*SCPRVI
Trigger: GATGACCCGGGGGCAGCTTCAGGATGAGTTAGAGAA...CTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACTTCTCTAACTCATCCTaGAGCTGCCCCCGGGTCATC +
Preference number: 4 (lower is better)
Translates to: TPQYDNVNSLKQERLVENFSNSS*SCPRVI
Trigger: GATGACCCGGGGGCAGCTTCAGGATGAGTTAGAGAA...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp TATGCTAGAAGAAGGTTCCAGGCAATGCACGAGGCTGAGGTTCAGAGAAGACGATGGTCTGCTATCTGCTaGAGAATGGCGTTGGCAAAC +
Preference number: 4 (lower is better)
Translates to: YARRRFQAMHEAEVQRRRWSAIC*RMALAN
Trigger: GTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCA...TCGTCTTCTCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTCTTCTAGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCTAGTGTGATGGGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACTCTTGGCTCCTGGGTTaGCTACCTCAGGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: PSVMGVGHLVKCWFNDLDSWLLG*LPQASP
Trigger: TGGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGA...GTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCCCATCACACTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGGGACAATCACACTTCTTCAAGTaGGCAAGTTGGGATGAAGTT +
Preference number: 4 (lower is better)
Translates to: GQEDSSRALTTCSRMSGQSHFFK*ASWDEV
Trigger: AACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGA...TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp TCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTCACACTTCTTCAAGTaGGCAAGTTGGGATGAAGTT +
Preference number: 4 (lower is better)
Translates to: SFSCQRTGGERLLCSMALSHFFK*ASWDEV
Trigger: AACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGA...GAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp TCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGCCACGTTTAATCCTCTCAGCCTGTTaGACTCCAAGTCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: SESYKLHPLCPTARRPRLILSAC*TPSPFL
Trigger: CAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGAT...TAAACGTGGCCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGGCCGAGGAACAGAGTaGGGAAGGCTGCGACAGACA +
Preference number: 4 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVGRGTE*GRLRQT
Trigger: TGTCTGTCGCAGCCTTCCTCACTCTGTTCCTCGGCC...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp TTCCTTGCTGTTCACAGAGACCAGACAGATGATATCGGTCCCGGAAATGCTTCTGCAAAGCTAGCAGGGTaGGTGAGGGATCACAACTTC +
Preference number: 4 (lower is better)
Translates to: FLAVHRDQTDDIGPGNASAKLAG*VRDHNF
Trigger: GAAGTTGTGATCCCTCACTCACCCTGCTAGCTTTGC...AGAAGCATTTCCGGGACCGATATCATCTGTCTGGTCTCTGTGAACAGCAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CTGCCCTACAGCACGAAGGCCACGTTTATTACTGAACTCCTAGCCAGCCTCCAGAGACCCCCAAACTCATaGATTCCATTAGGGAACTTT +
Preference number: 4 (lower is better)
Translates to: LPYSTKATFITELLASLQRPPNS*IPLGNF
Trigger: AAAGTTCCCTAATGGAATTCATGAGTTTGGGGGTCT...CTGGAGGCTGGCTAGGAGTTCAGTAATAAACGTGGCCTTCGTGCTGTAGGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGCCAATACCTTCATTaGTTTGCAGTCTTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPCQYLH*FAVLGS
Trigger: TGACCCCAAGACTGCAAATCAATGAAGGTATTGGCA...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGTGCCAATACCTTCATTaGTTTGCAGTCTTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLCQYLH*FAVLGS
Trigger: TGACCCCAAGACTGCAAATCAATGAAGGTATTGGCA...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGGGAAGTTCCTGGACTaGTGGGGCTGTGCTGACTCT +
Preference number: 4 (lower is better)
Translates to: AVLQRDSTLYLPWTSRRLGKFLD*WGCADS
Trigger: AGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCC...TAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGACTCTACAGACTTTAAATTCTCAGAGACCAGACAGATaGTATCGGTCCCGGAAATGC +
Preference number: 4 (lower is better)
Translates to: VGSSWTDGAVLTLQTLNSQRPDR*YRSRKC
Trigger: GCATTTCCGGGACCGATATCATCTGTCTGGTCTCTG...AGAATTTAAAGTCTGTAGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGGGTCACGCTATGTTGCCCTGGCTGGTGCTCTTTCAACCTCACATGTTCTTCATCTAAAACCCAAGTGTaGGGAAGTCTGAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: RVTLCCPGWCSFNLTCSSSKTQV*GSLRAT
Trigger: TGTGGCTCTCAGACTTCCTCACACTTGGGTTTTAGA...TGAAGAACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACATAGCGTGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTCAATGGACAGAAATTaGGGGGCAAGTCACAATGCC +
Preference number: 4 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLSMDRN*GASHNA
Trigger: GGCATTGTGACTTGCCCCTCAATTTCTGTCCATTGA...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GGTGGCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGATTACTGGTATTTGCTaGCACAGGGTCCGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GGSSSERFDPLSTLDIKKITGIC*HRVRWA
Trigger: AGCCCAGCGGACCCTGTGTCAGCAAATACCAGTAAT...CTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACACCTGGGGTCACAAACTGTaGAACCTCTACCCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: PQYDNVNSLKQERLVENTWGHKL*NLYPEV
Trigger: GACCTCTGGGTAGAGGTTTCACAGTTTGTGACCCCA...GGTGTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTAACACTCCTGCCTTTCAGACACACACATACAGCTaGAGGCAGCGGGTGCACGTG +
Preference number: 4 (lower is better)
Translates to: QFFTLWWIKRDANTPAFQTHTYS*RQRVHV
Trigger: CACGTGCACCCGCTGCCTTCAGCTGTATGTGTGTGT...CTGAAAGGCAGGAGTGTTAGCATCTCGCTTTATCCACCATAACGTAAAGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCTCACTTGCCTTGAGGTaGGACTTTCCAACTCAGCTA +
Preference number: 4 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFSLALR*DFPTQL
Trigger: TAGCTGAGTTGGAAAGTCTCACCTCAAGGCAAGTGA...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000546231.6
ENST00000611180.4
CDS-3UTR TCA 90 bp GGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCTGAACTAAGCCTCTaGTTGGCTATGCCCATATAC +
Preference number: 4 (lower is better)
Translates to: GCRDNGLLSAEEWRWQTPAELSL*LAMPIY
Trigger: GTATATGGGCATAGCCAATCAGAGGCTTAGTTCAGC...AGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp CTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTCTGAACAAAATGGCTaGACTAAGCCTCTGATTGGC +
Preference number: 4 (lower is better)
Translates to: LVHWRHPLSLLNSKSIPGSEQNG*TKPLIG
Trigger: GCCAATCAGAGGCTTAGTTCAGCCATTTTGTTCAGA...ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000588412.5
CDS-3UTR GCA 90 bp GGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGCAGGGCTGCCGCTACTaGTGCTGCTGCCGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GVQCTTLIYFYFGQVLRGQGCRY*CCCRPG
Trigger: GCCTGGGCGGCAGCAGCAGCAGTAGCGGCAGCCCTG...CCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
CDS-3UTR GCA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTATGCCACCTCCAACACTaGTTCCCGAACTCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVCHLQH*FPNSLP
Trigger: CGGGAGGGAGTTCGGGAAGCAGTGTTGGAGGTGGCA...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp TGCTATTTACTGCTTCAACTCCAGCAGGTATGTCTCACAGAATCCACTACATCTTGCCACCTCCAACACTaGTTCCCGAACTCCCTCCCG +
Preference number: 4 (lower is better)
Translates to: CYLLLQLQQVCLTESTTSCHLQH*FPNSLP
Trigger: CGGGAGGGAGTTCGGGAAGCAGTGTTGGAGGTGGCA...AGATGTAGTGGATTCTGTGAGACATACCTGCTGGAGTTGAAGCAGTAAATAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GCAGTTGTATGCCCATATGAAACCATGACCACTAGGAGAGGGGCATGGAATGACAAAGGGTTTTCCCACTaGCACCTCCAACACTGCTTC +
Preference number: 4 (lower is better)
Translates to: AVVCPYETMTTRRGAWNDKGFSH*HLQHCF
Trigger: GAAGCAGTGTTGGAGGTGGCAGTGGGAAAACCCTTT...GTCATTCCATGCCCCTCTCCTAGTGGTCATGGTTTCATATGGGCATACAACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCAAAGGGTTTTCCCACTaGCACCTCCAACACTGCTTC +
Preference number: 4 (lower is better)
Translates to: WRHPLSLLNSKSIPGFILKGFSH*HLQHCF
Trigger: GAAGCAGTGTTGGAGGTGGCAGTGGGAAAACCCTTT...GAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp GCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTAACTCAAAAGGGTTTTCCCACTaGCACCTCCAACACTGCTTC +
Preference number: 4 (lower is better)
Translates to: ALANSCSSALSRSPFSNSKGFSH*HLQHCF
Trigger: GAAGCAGTGTTGGAGGTGGCAGTGGGAAAACCCTTT...TGAGTTAGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGGTGATGCTCTCCAAATaGTATGGTGTCACTAGCAAC +
Preference number: 4 (lower is better)
Translates to: VGTMVCYLLKNGVGKLLQVMLSK*YGVTSN
Trigger: GTTGCTAGTGACACCATAGCATTTGGAGAGCATCAC...CTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp TCCAGCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGGCCTGGATTGTCATCTaGATGTGCTGGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SSRYVSQNPLHLSLTEKWAWIVI*MCWFSS
Trigger: GGAGGAAAACCAGCACATGCAGATGACAATCCAGGC...CCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGAAGGTTCGCCAGTCCTaGTGCTACTATCCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: RDANTPAFQCWELSTWFTKVRQS*CYYPAE
Trigger: TTCAGCAGGATAGTAGCAGCAGGACTGGCGAACCTT...CGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GGTGGCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGCTCCTCTGTCAGCTCTaGTACACAAGGTTCGCCAGT +
Preference number: 4 (lower is better)
Translates to: GGSSSERFDPLSTLDIKKLLCQL*YTRFAS
Trigger: ACTGGCGAACCTTGTGTAGCAGAGCTGACAGAGGAG...CTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp CGGGTCATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTATGGCAGAAAGTCCTTTaGTCTGCAACATTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: RVIFCSSFSQAAWSSSKLWQKVL*SATFPE
Trigger: TTCTGGAAATGTTGCAGAGCAAAGGACTTTCTGCCA...TAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
CDS-3UTR GCA 90 bp GTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGACTCTACAGACTTTAAATTCTGTGCATCTCTGCCTCTaGCAGTCGTCTTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: VGSSWTDGAVLTLQTLNSVHLCL*QSSCSL
Trigger: GAGAGAACAAGACGACTGGCAGAGGCAGAGATGCAC...AGAATTTAAAGTCTGTAGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TTCCTTGCTGTTCACAGAGACCAGACAGATGATATCGGTCCCGGAAATGCTTCTGTGCATCTCTGCCTCTaGCAGTCGTCTTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: FLAVHRDQTDDIGPGNASVHLCL*QSSCSL
Trigger: GAGAGAACAAGACGACTGGCAGAGGCAGAGATGCAC...AGAAGCATTTCCGGGACCGATATCATCTGTCTGGTCTCTGTGAACAGCAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp ATGAGACACTCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGATGAACGTGCATCTCTaGCTCTGCCAGTCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: MRHSESYKLHPLCPTARRMNVHL*LCQSSC
Trigger: ACAAGACGACTGGCAGAGGCAGAGATGCACGTTCAT...CCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGAGTGTCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AAACCCCGTTGGGATCACACCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTATGAACGTGCATCTCTaGCTCTGCCAGTCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: KPRWDHTHSSSCPLYGDIMNVHL*LCQSSC
Trigger: ACAAGACGACTGGCAGAGGCAGAGATGCACGTTCAT...AATGTCACCATAAAGAGGGCACGAAGAAGAGTGGGTGTGATCCCAACGGGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATTTCTCAAACCTTCGATaGATCTCCTCTCTCAACATA +
Preference number: 4 (lower is better)
Translates to: RQGWMKTQTLGERVLPSHFSNLR*ISSLNI
Trigger: TATGTTGAGAGAGGAGATGCATCGAAGGTTTGAGAA...ATGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTTTGGTGGTGTCAGCCTaGAAGGATTTGACCCGTTCT +
Preference number: 4 (lower is better)
Translates to: RMALANSCSSALSRSPFSLVVSA*KDLTRS
Trigger: AGAACGGGTCAAATCCTTGCAGGCTGACACCACCAA...AGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp CTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTTTGGTGGTGTCAGCCTaGAAGGATTTGACCCGTTCT +
Preference number: 4 (lower is better)
Translates to: LSAEEWRWQTPAVLHCPVLVVSA*KDLTRS
Trigger: AGAACGGGTCAAATCCTTGCAGGCTGACACCACCAA...AACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp CTGCCCTACAGCACGAAGGCCACGTTTATTACTGAACTCCTAGCCAGCCTCCAGTCATCTCTGTCCCTCTaGTCCTTTAAGCGTTCAATT +
Preference number: 4 (lower is better)
Translates to: LPYSTKATFITELLASLQSSLSL*SFKRSI
Trigger: AATTGAACGCTTAAAGGAGCAGAGGGACAGAGATGA...CTGGAGGCTGGCTAGGAGTTCAGTAATAAACGTGGCCTTCGTGCTGTAGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTCTTGGTTCCACCGTGGCCCCGTGAAGGCTGTTATCACACCGCAGTTCTTTACTCATCTCTGTCCCTCTaGTCCTTTAAGCGTTCAATT +
Preference number: 4 (lower is better)
Translates to: VLVPPWPREGCYHTAVLYSSLSL*SFKRSI
Trigger: AATTGAACGCTTAAAGGAGCAGAGGGACAGAGATGA...GTAAAGAACTGCGGTGTGATAACAGCCTTCACGGGGCCACGGTGGAACCAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCTGGGTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCGCCAGAGAAGAAGCATaGTCTTTCAGATCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: PGLTTSGFPIKQGQEDSSAREEA*SFRSKS
Trigger: ACTTTTGGATCTGAAAGAGCATGCTTCTTCTCTGGC...GGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAACCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GTGCACGTGCATCCCAGACACCACCATGGAGGCTGCTACTGTTACCAAAAGGAATCTGGCTTCCAATGCTaGCTCATGTGCCTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: VHVHPRHHHGGCYCYQKESGFQC*LMCLFQ
Trigger: TTGAAAAAGGCACATGAGGCAGCATTGGAAGCCAGA...TTCCTTTTGGTAACAGTAGCAGCCTCCATGGTGGTGTCTGGGATGCACGTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTAACTCAGGCTCTGGCTTCCAATaGTGCCTCATGTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: ALANSCSSALSRSPFSNSGSGFQ*CLMCLF
Trigger: AAAAAGGCACATGAGGCAGCATTGGAAGCCAGAGCC...TGAGTTAGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCGGCTCTGGCTTCCAATaGTGCCTCATGTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: VCYLLKNGVGKLLQFCIVGSGFQ*CLMCLF
Trigger: AAAAAGGCACATGAGGCAGCATTGGAAGCCAGAGCC...GACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp CTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTGGCTCTGGCTTCCAATaGTGCCTCATGTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: LSAEEWRWQTPAVLHCPVGSGFQ*CLMCLF
Trigger: AAAAAGGCACATGAGGCAGCATTGGAAGCCAGAGCC...AACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGGAGTCGATCAACTTCTaGCTGGGCCTTGCTAGATTC +
Preference number: 4 (lower is better)
Translates to: DNGLLSAEEWRWQTPAVLESINF*LGLARF
Trigger: GAATCTAGCAAGGCCCAGGCAGAAGTTGATCGACTC...CAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp CGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCACACCATTTCCCGCTCTaGAGTTATCTGTACACTTTC +
Preference number: 4 (lower is better)
Translates to: RAPVPRSSLFLAPGLTTSHHFPL*SYLYTF
Trigger: GAAAGTGTACAGATAACTGCAGAGCGGGAAATGGTG...TGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp CTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTCACCATTTCCCGCTCTaGAGTTATCTGTACACTTTC +
Preference number: 4 (lower is better)
Translates to: LVHWRHPLSLLNSKSIPGHHFPL*SYLYTF
Trigger: GAAAGTGTACAGATAACTGCAGAGCGGGAAATGGTG...ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp TTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTATGGATTCTAGTTCCTaGTTTACCTTCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: FPIKQGQEDSSRALTTCSMDSSS*FTFSMA
Trigger: GGCCATGGAGAAGGTAAAGCAGGAACTAGAATCCAT...AGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp TGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGATGGATTCTAGTTCCTaGTTTACCTTCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: WFHSHVRGQEVRGSSAPWMDSSS*FTFSMA
Trigger: GGCCATGGAGAAGGTAAAGCAGGAACTAGAATCCAT...CCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp TATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCTTTTCTGCCAGAGACTaGTGGGTGGAGGACAGCTTT +
Preference number: 4 (lower is better)
Translates to: YLLKNGVGKLLQFCIVPFFSARD*WVEDSF
Trigger: AAAGCTGTCCTCCACCCAGCAGTCTCTGGCAGAAAA...GAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTGTGAGTTTCCTTTTCTaGCAGAGACTGCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: EEWRWQTPAVLHCPVHLSVSFLF*QRLLGG
Trigger: TCCACCCAGCAGTCTCTGGCAGAAAAGGAAACTCAC...AGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp CGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGTGAGTTTCCTTTTCTaGCAGAGACTGCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: RDANTPAFQCWELSTWFTVSFLF*QRLLGG
Trigger: TCCACCCAGCAGTCTCTGGCAGAAAAGGAAACTCAC...CGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GCAGTTGTATGCCCATATGAAACCATGACCACTAGGAGAGGGGCATGGAATGACGTGAGTTTCCTTTTCTaGCAGAGACTGCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: AVVCPYETMTTRRGAWNDVSFLF*QRLLGG
Trigger: TCCACCCAGCAGTCTCTGGCAGAAAAGGAAACTCAC...GTCATTCCATGCCCCTCTCCTAGTGGTCATGGTTTCATATGGGCATACAACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTGTGTTTCCTTCTCTCTaGCCGAAGATTAGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: LVHWRHPLSLLNSKSIPGVFPSL*PKISQV
Trigger: CACTTGACTAATCTTCGGGCAGAGAGAAGGAAACAC...ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGTGTTTCCTTCTCTCTaGCCGAAGATTAGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLVFPSL*PKISQV
Trigger: CACTTGACTAATCTTCGGGCAGAGAGAAGGAAACAC...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCGCCAGAAGAGCTTCTTaGTTCATCTCCAGAACTTCC +
Preference number: 4 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFARRAS*FISRTS
Trigger: GGAAGTTCTGGAGATGAAGCAAGAAGCTCTTCTGGC...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GTGGAGAACACCTCACACCATCTTCTTGTTAACTGGCCGAGGAACAGAGTGAGGGCCAGAAGAGCTTCTTaGTTCATCTCCAGAACTTCC +
Preference number: 4 (lower is better)
Translates to: VENTSHHLLVNWPRNRVRARRAS*FISRTS
Trigger: GGAAGTTCTGGAGATGAAGCAAGAAGCTCTTCTGGC...CCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGGTGTTCTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCGCCAGAAGAGCTTCTTaGTTCATCTCCAGAACTTCC +
Preference number: 4 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLARRAS*FISRTS
Trigger: GGAAGTTCTGGAGATGAAGCAAGAAGCTCTTCTGGC...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp TGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCGTCTGCTGCTTAAGCTaGTGTACCAGACGATCCTTC +
Preference number: 4 (lower is better)
Translates to: WRHPLSLLNSKSIPGFILVCCLS*CTRRSF
Trigger: GAAGGATCGTCTGGTACAGCAGCTTAAGCAGCAGAC...GAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp TGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCACGATTTTGCGTCTGCTaGTTAAGCTGCTGTACCAGA +
Preference number: 4 (lower is better)
Translates to: CRDNGLLSAEEWRWQTPARFCVC*LSCCTR
Trigger: TCTGGTACAGCAGCTTAAGCAGCAGACGCAAAATCG...TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp TGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGAAACTCCTGCAGTTCTaGATTGTCCCGTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: WFHSHVRGQEVRGSSAPWKLLQF*IVPFTF
Trigger: AAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTT...CCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp CGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAAAACTCCTGCAGTTCTaGATTGTCCCGTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: RAPVPRSSLFLAPGLTTSKLLQF*IVPFTF
Trigger: AAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTT...TGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp TGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCGTCGGGACAATGGTCTaGTATCTGCTGAAGAATGGC +
Preference number: 4 (lower is better)
Translates to: WRHPLSLLNSKSIPGFILVGTMV*YLLKNG
Trigger: GCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC...GAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp TATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCGTCGGGACAATGGTCTaGTATCTGCTGAAGAATGGC +
Preference number: 4 (lower is better)
Translates to: YLLKNGVGKLLQFCIVPFVGTMV*YLLKNG
Trigger: GCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC...GAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTGTCGGGACAATGGTCTaGTATCTGCTGAAGAATGGC +
Preference number: 4 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVVGTMV*YLLKNG
Trigger: GCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGTCGGGACAATGGTCTaGTATCTGCTGAAGAATGGC +
Preference number: 4 (lower is better)
Translates to: EMLTLLPFSAGSFLHGLRVGTMV*YLLKNG
Trigger: GCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC...CCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCGTTTGTAGTGTTTGGTaGCAAGAAGGTTCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: VCYLLKNGVGKLLQFCIVVCSVW*QEGSGH
Trigger: GTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC...GACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTGTTTGTAGTGTTTGGTaGCAAGAAGGTTCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSVCSVW*QEGSGH
Trigger: GTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAAGCCATCGTGAGGCCTaGTCACAGCTCCCCGGTACA +
Preference number: 4 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVSHREA*SQLPGT
Trigger: TGTACCGGGGAGCTGTGAGCAGGCCTCACGATGGCT...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp GAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTATGTTGCCCTGGCTGGTaGTCTTTCAACCTCACATGT +
Preference number: 4 (lower is better)
Translates to: EWRWQTPAVLHCPVHLSLCCPGW*SFNLTC
Trigger: ACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACA...TAGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000588412.5
CDS-3UTR GCA 90 bp TTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTTTACTGGGGCAAAGCTaGAGGCGGGGACAACAGGGT +
Preference number: 4 (lower is better)
Translates to: FQCWELSTWFTGTAMNRILLGQS*RRGQQG
Trigger: ACCCTGTTGTCCCCGCCTGCAGCTTTGCCCCAGTAA...AATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTAGCTCAGGACACGGGTaGTGGCAAGGCAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFSSGHG*WQGRQP
Trigger: AGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCT...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCATACCTTCATTGATTTaGAGTCTTGGGGTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFIPSLI*SLGVSF
Trigger: AAAGCTGACCCCAAGACTGCAAATCAATGAAGGTAT...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCACTAATTATTTATGACTaGTGTTGTCTACGCTACGTC +
Preference number: 4 (lower is better)
Translates to: QAGLDEDSDLGRTSAPKPLIIYD*CCLRYV
Trigger: GACGTAGCGTAGACAACAGCAGTCATAAATAATTAG...TGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCTTACTATCTAACCCCTaGACCCCTCTCTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGLLSNP*TPLWPA
Trigger: GGCTGGCCAGAGAGGGGTGCAGGGGTTAGATAGTAA...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CTAGGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTACTCCTGCCTTTCAGTaGTGGGAGCTTTCTACATGG +
Preference number: 4 (lower is better)
Translates to: LGCRDNGLLSAEEWRWQTTPAFQ*WELSTW
Trigger: CCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGT...AGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355446.9
ENST00000440394.7
CDS-3UTR GCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTACTCCTGCCTTTCAGTaGTGGGAGCTTTCTACATGG +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSTPAFQ*WELSTW
Trigger: CCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGT...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGGAAGCATCTCAGTAAGAGGTTTATGAGCAGAGTCCATTTAACCTTCGATAAGGGGATCTGGGCCACCTaGTTGGAGAGAGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RKHLSKRFMSRVHLTFDKGIWAT*LERAAG
Trigger: GCCAGCTGCTCTCTCCAAGCAGGTGGCCCAGATCCC...CTTATCGAAGGTTAAATGGACTCTGCTCATAAACCTCTTACTGAGATGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCCTAGCCAGCCTCCAGTaGCCAAGAACGGTCAAGAAG +
Preference number: 4 (lower is better)
Translates to: ERFDPLSTLDIKKVSVETLASLQ*PRTVKK
Trigger: CTTCTTGACCGTTCTTGGGCACTGGAGGCTGGCTAG...GGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp ACACACCTTAAGATCGGGGAGGGGAAGGACATGCTATTTACTGCTTCAACTCCACTCAAGCGATTCTCCTaGCTCCTGAGTAGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: THLKIGEGKDMLFTASTPLKRFS*LLSSWD
Trigger: ATCCCAGCTACTCAGGAGGCAGGAGAATCGCTTGAG...TGGAGTTGAAGCAGTAAATAGCATGTCCTTCCCCTCCCCGATCTTAAGGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACACCGGGTGCCTGCTGCATTaGAGTCTCTTCTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: PQYDNVNSLKQERLVENTGCLLH*SLFSSF
Trigger: GAAGGATGAGAAGAGACTGCAATGCAGCAGGCACCC...GGTGTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACCCTAAGTGTGCTCCATaGTTCCTAAGCCGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LSTWFTGTAMNRIEVTDHPKCAP*FLSRQP
Trigger: GGGCTGGCGGCTTAGGAAGCATGGAGCACACTTAGG...GTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTCCTAAGTGTGCTCCATaGTTCCTAAGCCGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: FQCWELSTWFTGTAMNRIPKCAP*FLSRQP
Trigger: GGGCTGGCGGCTTAGGAAGCATGGAGCACACTTAGG...AATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACACCTAAGTGTGCTCCATaGTTCCTAAGCCGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: RFDPLSTLDIKKVSVETTPKCAP*FLSRQP
Trigger: GGGCTGGCGGCTTAGGAAGCATGGAGCACACTTAGG...TGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GCAGTTGTATGCCCATATGAAACCATGACCACTAGGAGAGGGGCATGGAATGACGATTCTCGTTCCTTTTaGTCGGCAGGTGTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: AVVCPYETMTTRRGAWNDDSRSF*SAGVSC
Trigger: GCAAGAGACACCTGCCGAGCAAAAGGAACGAGAATC...GTCATTCCATGCCCCTCTCCTAGTGGTCATGGTTTCATATGGGCATACAACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACATCCAAATCCTGGCACAACTaGGAGGCTCTGAGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: FDPLSTLDIKKVSVETTSKSWHN*EALSPR
Trigger: TCTGGGGCTCAGAGCCTCGCAGTTGTGCCAGGATTT...GGATGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCATGTCAAAATCCTGGCACAACTaGGAGGCTCTGAGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: HPLSLLNSKSIPGFILMSKSWHN*EALSPR
Trigger: TCTGGGGCTCAGAGCCTCGCAGTTGTGCCAGGATTT...TGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTACCCCACTGGATATCCTaGAATGCCCGGCAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVPHWIS*NARQVP
Trigger: AGGCACCTGCCGGGCATTGCAGGATATCCAGTGGGG...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTATAGGAAGCTGGTGGAGTTTCTGGTCTTTCACTTaGCTTGAGGTGAGACTTTCC +
Preference number: 4 (lower is better)
Translates to: LILPSRLVIVQVIGSWWSFWSFT*LEVRLS
Trigger: GGAAAGTCTCACCTCAAGGCAAGTGAAAGACCAGAA...ACTCCACCAGCTTCCTATAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTGGGCACTTCCATACATaGTTGCAAGGTCAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: AGMSHRIHYISPSLRSGLGHFHT*LQGQER
Trigger: CCTTTCCTGACCTTGCAACCATGTATGGAAGTGCCC...AAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGGAACGTGGAAGCCTaGGTGAACGCCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFGNVEA*VNAQGS
Trigger: AGAGCCCTGGGCGTTCACCCAGGCTTCCACGTTCCC...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp AGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACATCCCTCCCGTACTGTTaGTTCGACGGTGACCCAAGC +
Preference number: 4 (lower is better)
Translates to: RFDPLSTLDIKKVSVETTSLPYC*FDGDPS
Trigger: GCTTGGGTCACCGTCGAACCAACAGTACGGGAGGGA...TGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCTTCCTTCTTCAGCTCTaGGCTCCAGAAGGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFFLLQL*APEGLD
Trigger: ATCAAGACCTTCTGGAGCCCAGAGCTGAAGAAGGAA...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CCATGCAGTATTAGGCACACTGAGCTAGAACCCACGTCGGGTGAGGGTGGTTATGTCATCTGCATGTGCTaGTTTTCCTCCTGTACAACT +
Preference number: 4 (lower is better)
Translates to: PCSIRHTELEPTSGEGGYVICMC*FSSCTT
Trigger: AGTTGTACAGGAGGAAAACCAGCACATGCAGATGAC...ATAACCACCCTCACCCGACGTGGGTTCTAGCTCAGTGTGCCTAATACTGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCCGTCTTGTTCTCTCATaGTCTTCCTCGGTAGCCTTG +
Preference number: 4 (lower is better)
Translates to: WRHPLSLLNSKSIPGFILRLVLS*SSSVAL
Trigger: CAAGGCTACCGAGGAAGACCATGAGAGAACAAGACG...GAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp GGTGGCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGTCGGTCACTCATCTCTaGACTGGCTCTGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: GGSSSERFDPLSTLDIKKSVTHL*TGSGFQ
Trigger: TTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACCGA...CTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp GATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGAGGGCTTCCTCGATCAACTTCTGCCTaGGCCTTGCTAGATTCATCT +
Preference number: 4 (lower is better)
Translates to: DIGPGNASSQKQCHRGLPRSTSA*ALLDSS
Trigger: AGATGAATCTAGCAAGGCCCAGGCAGAAGTTGATCG...AGGAAGCCCTCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGGTCACGCTATGTTGCCCTGGCTGGTGCTCTTTCAACCTCACATGTTCTTCACGATCAACTTCTGCCTaGGCCTTGCTAGATTCATCT +
Preference number: 4 (lower is better)
Translates to: RVTLCCPGWCSFNLTCSSRSTSA*ALLDSS
Trigger: AGATGAATCTAGCAAGGCCCAGGCAGAAGTTGATCG...TGAAGAACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACATAGCGTGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp GTGGAGAACACCTCACACCATCTTCTTGTTAACTGGCCGAGGAACAGAGTGAGGCGATCAACTTCTGCCTaGGCCTTGCTAGATTCATCT +
Preference number: 4 (lower is better)
Translates to: VENTSHHLLVNWPRNRVRRSTSA*ALLDSS
Trigger: AGATGAATCTAGCAAGGCCCAGGCAGAAGTTGATCG...CCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGGTGTTCTCCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp CTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTATAGGAAGCTGGTGGAGTTTTCAGCATTGGTCCTaGCTGATTCCTCTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: LILPSRLVIVQVIGSWWSFQHWS*LIPLVL
Trigger: TAGCACAAGAGGAATCAGCCAGGACCAATGCTGAAA...ACTCCACCAGCTTCCTATAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000440394.7
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCACCTGTTTTTCAGCATTaGTCCTGGCTGATTCCTCTT +
Preference number: 4 (lower is better)
Translates to: RAPVPRSSLFLAPGLTTSPVFQH*SWLIPL
Trigger: AAGAGGAATCAGCCAGGACCAATGCTGAAAAACAGG...TGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTGCTTTACCTTCTCCATaGCCATCAGTAACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GPLEASSQPVELQVHSWFALPSP*PSVTPP
Trigger: TGGAGGAGTTACTGATGGCCATGGAGAAGGTAAAGC...AAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp GTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGACTCTACAGACTTTAAATTCTCCAGAGACTGCTGGGTaGAGGACAGCTTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: VGSSWTDGAVLTLQTLNSPETAG*RTALLS
Trigger: TGAAAGCAAAGCTGTCCTCCACCCAGCAGTCTCTGG...AGAATTTAAAGTCTGTAGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCTCTGCCAGAGACTGCTaGGTGGAGGACAGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGSARDC*VEDSFA
Trigger: AGCAAAGCTGTCCTCCACCCAGCAGTCTCTGGCAGA...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTGCAGCCACTTCCTCTTaGGTCTTCTTCTTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSAATSS*VFFLED
Trigger: GTCCTCTAAGAAGAAGACCCAAGAGGAAGTGGCTGC...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp TATGCTAGAAGAAGGTTCCAGGCAATGCACGAGGCTGAGGTTCAGAGAAGACGAGCAGCCACTTCCTCTTaGGTCTTCTTCTTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: YARRRFQAMHEAEVQRRRAATSS*VFFLED
Trigger: GTCCTCTAAGAAGAAGACCCAAGAGGAAGTGGCTGC...TCGTCTTCTCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTCTTCTAGCATA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTGCAGCCACTTCCTCTTaGGTCTTCTTCTTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: RMALANSCSSALSRSPFSAATSS*VFFLED
Trigger: GTCCTCTAAGAAGAAGACCCAAGAGGAAGTGGCTGC...AGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp ATGAGACACTCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGGCAGCCACTTCCTCTTaGGTCTTCTTCTTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: MRHSESYKLHPLCPTARRAATSS*VFFLED
Trigger: GTCCTCTAAGAAGAAGACCCAAGAGGAAGTGGCTGC...CCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGAGTGTCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTAACTCAGCAGCCACTTCCTCTTaGGTCTTCTTCTTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: ALANSCSSALSRSPFSNSAATSS*VFFLED
Trigger: GTCCTCTAAGAAGAAGACCCAAGAGGAAGTGGCTGC...TGAGTTAGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTCTGGATGATCTGGTCTaGGGAGGGCTTGTGATTTGT +
Preference number: 4 (lower is better)
Translates to: AGMSHRIHYISPSLRSGLLDDLV*GGLVIC
Trigger: ACAAATCACAAGCCCTCCCCAGACCAGATCATCCAG...AAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTAACTCACAAGTTATAGGAAGCTaGTGGAGTGAGTCCACGGAG +
Preference number: 4 (lower is better)
Translates to: ALANSCSSALSRSPFSNSQVIGS*WSESTE
Trigger: CTCCGTGGACTCACTCCACCAGCTTCCTATAACTTG...TGAGTTAGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCAAGTTATAGGAAGCTaGTGGAGTGAGTCCACGGAG +
Preference number: 4 (lower is better)
Translates to: EEWRWQTPAVLHCPVHLSQVIGS*WSESTE
Trigger: CTCCGTGGACTCACTCCACCAGCTTCCTATAACTTG...AGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp TATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCCAAGTTATAGGAAGCTaGTGGAGTGAGTCCACGGAG +
Preference number: 4 (lower is better)
Translates to: YLLKNGVGKLLQFCIVPFQVIGS*WSESTE
Trigger: CTCCGTGGACTCACTCCACCAGCTTCCTATAACTTG...GAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp ACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCCAAGTTATAGGAAGCTaGTGGAGTGAGTCCACGGAG +
Preference number: 4 (lower is better)
Translates to: TMVCYLLKNGVGKLLQFCQVIGS*WSESTE
Trigger: CTCCGTGGACTCACTCCACCAGCTTCCTATAACTTG...GCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp AAACCCCGTTGGGATCACACCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTGCTGAAGAATGGCGTTaGCAAACTCCTGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: KPRWDHTHSSSCPLYGDIAEEWR*QTPAVL
Trigger: CAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGC...AATGTCACCATAAAGAGGGCACGAAGAAGAGTGGGTGTGATCCCAACGGGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCCTATCTGCTGAAGAATaGCGTTGGCAAACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFLSAEE*RWQTPA
Trigger: TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAG...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGAGGGCTTCCTTCTTTTCTTGGCTCCTaGGTTGACTACCTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: DIGPGNASSQKQCHRGLPSFLGS*VDYLRL
Trigger: AAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGA...AGGAAGCCCTCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCGAAGTTTGTAGTGTTTaGTGCCAAGAAGGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLEVCSV*CQEGSG
Trigger: CCCGGAACCTTCTTGGCACCAAACACTACAAACTTC...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GTGGAGAACACCTCACACCATCTTCTTGTTAACTGGCCGAGGAACAGAGTGAGGGAAGTTTGTAGTGTTTaGTGCCAAGAAGGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: VENTSHHLLVNWPRNRVREVCSV*CQEGSG
Trigger: CCCGGAACCTTCTTGGCACCAAACACTACAAACTTC...CCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGGTGTTCTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp CTGCCCTACAGCACGAAGGCCACGTTTATTACTGAACTCCTAGCCAGCCTCCAGACCCTTTATCTACCCTaGACATCAAGAAGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: LPYSTKATFITELLASLQTLYLP*TSRRLV
Trigger: CACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGT...CTGGAGGCTGGCTAGGAGTTCAGTAATAAACGTGGCCTTCGTGCTGTAGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CTGCCCTACAGCACGAAGGCCACGTTTATTACTGAACTCCTAGCCAGCCTCCAGCTCCAAGTCCATTCCTaGTTTCATTCTCATGTCAGA +
Preference number: 4 (lower is better)
Translates to: LPYSTKATFITELLASLQLQVHS*FHSHVR
Trigger: TCTGACATGAGAATGAAACCAGGAATGGACTTGGAG...CTGGAGGCTGGCTAGGAGTTCAGTAATAAACGTGGCCTTCGTGCTGTAGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCATGTCAAGCTCTCTGGTCCATTaGAGGCATCCTCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: HPLSLLNSKSIPGFILMSSSLVH*RHPLSL
Trigger: CAGGCTGAGAGGATGCCTCCAATGGACCAGAGAGCT...TGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp CTAACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAGCTCTCTGGTCCATTaGAGGCATCCTCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LTPQYDNVNSLKQERLVESSLVH*RHPLSL
Trigger: CAGGCTGAGAGGATGCCTCCAATGGACCAGAGAGCT...CTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp GTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGACTCTACAGACTTTAAATTCTGAACACTCAGCTCTCTaGTCCATTGGAGGCATCCTC +
Preference number: 4 (lower is better)
Translates to: VGSSWTDGAVLTLQTLNSEHSAL*SIGGIL
Trigger: GAGGATGCCTCCAATGGACCAGAGAGCTGAGTGTTC...AGAATTTAAAGTCTGTAGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CTAGGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTAACAGGAGAGACTGGTaGAGAACACCTCACACCATC +
Preference number: 4 (lower is better)
Translates to: LGCRDNGLLSAEEWRWQTNRRDW*RTPHTI
Trigger: GATGGTGTGAGGTGTTCTCCACCAGTCTCTCCTGTT...AGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000588412.5
CDS-3UTR CCA 90 bp GCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTAACAGGAGAGACTGGTaGAGAACACCTCACACCATC +
Preference number: 4 (lower is better)
Translates to: AGMSHRIHYISPSLRSGLNRRDW*RTPHTI
Trigger: GATGGTGTGAGGTGTTCTCCACCAGTCTCTCCTGTT...AAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTTCAAACAGGAGAGACTaGTGGAGAACACCTCACACC +
Preference number: 4 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVSNRRD*WRTPHT
Trigger: GGTGTGAGGTGTTCTCCACCAGTCTCTCCTGTTTGA...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp AGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTTCAAACAGGAGAGACTaGTGGAGAACACCTCACACC +
Preference number: 4 (lower is better)
Translates to: RMALANSCSSALSRSPFSSNRRD*WRTPHT
Trigger: GGTGTGAGGTGTTCTCCACCAGTCTCTCCTGTTTGA...AGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000588412.5
CDS-3UTR CCA 90 bp CAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTAACACTCCTGCCTTTCAGGTGGTGGGAAGTTCCTaGACTGATGGGGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: QFFTLWWIKRDANTPAFQVVGSS*TDGAVL
Trigger: CAGCACAGCCCCATCAGTCCAGGAACTTCCCACCAC...CTGAAAGGCAGGAGTGTTAGCATCTCGCTTTATCCACCATAACGTAAAGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTGTCTTGGTTCCACCGTaGCCCCGTGAAGGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: RYVSQNPLHLSLTEKWPFVLVPP*PREGCY
Trigger: ATAACAGCCTTCACGGGGCCACGGTGGAACCAAGAC...AAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCGTCTTGGTTCCACCGTaGCCCCGTGAAGGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: ERFDPLSTLDIKKVSVETVLVPP*PREGCY
Trigger: ATAACAGCCTTCACGGGGCCACGGTGGAACCAAGAC...GGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCGTTACAAAACCCCGTTaGGATCACACCCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLVTKPR*DHTHSS
Trigger: AGAAGAGTGGGTGTGATCCCAACGGGGTTTTGTAAC...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGGGGTTTTTGCCATCTTaGCCAGGCTGGCCTCGAACT +
Preference number: 4 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVGFLPS*PGWPRT
Trigger: AGTTCGAGGCCAGCCTGGCCAAGATGGCAAAAACCC...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCCAGCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGGGAGGAACAGGACTCTaGCAGCAAATCCAAATGCCA +
Preference number: 4 (lower is better)
Translates to: SSRYVSQNPLHLSLTEKWGGTGL*QQIQMP
Trigger: TGGCATTTGGATTTGCTGCCAGAGTCCTGTTCCTCC...CCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGGTCACGCTATGTTGCCCTGGCTGGTGCTCTTTCAACCTCACATGTTCTTCATACACTCAAGTAACATaGTCAACAGGAGGGCGGGAT +
Preference number: 4 (lower is better)
Translates to: RVTLCCPGWCSFNLTCSSYTQVT*STGGRD
Trigger: ATCCCGCCCTCCTGTTGACCATGTTACTTGAGTGTA...TGAAGAACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACATAGCGTGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCTACACTCAAGTAACATaGTCAACAGGAGGGCGGGAT +
Preference number: 4 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFYTQVT*STGGRD
Trigger: ATCCCGCCCTCCTGTTGACCATGTTACTTGAGTGTA...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp ATGAGACACTCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGGCGGTCTTCTCTGCTTaGCTCTTTCCTCAAAGACTC +
Preference number: 4 (lower is better)
Translates to: MRHSESYKLHPLCPTARRAVFSA*LFPQRL
Trigger: GAGTCTTTGAGGAAAGAGCCAAGCAGAGAAGACCGC...CCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGAGTGTCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTTGAGAAATGCCATGTaGTGTCACACTCCACGCAGC +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSLRNAM*CHTPRS
Trigger: GCTGCGTGGAGTGTGACACCACATGGCATTTCTCAA...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AAACCCCGTTGGGATCACACCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTTTGAGAAATGCCATGTaGTGTCACACTCCACGCAGC +
Preference number: 4 (lower is better)
Translates to: KPRWDHTHSSSCPLYGDILRNAM*CHTPRS
Trigger: GCTGCGTGGAGTGTGACACCACATGGCATTTCTCAA...AATGTCACCATAAAGAGGGCACGAAGAAGAGTGGGTGTGATCCCAACGGGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGTTGAGAAATGCCATGTaGTGTCACACTCCACGCAGC +
Preference number: 4 (lower is better)
Translates to: RDANTPAFQCWELSTWFTLRNAM*CHTPRS
Trigger: GCTGCGTGGAGTGTGACACCACATGGCATTTCTCAA...CGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTTTGCAGGCTCCAGGCTaGCCAGTGCTCACCCGTGCT +
Preference number: 4 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGLQAPG*PVLTRA
Trigger: AGCACGGGTGAGCACTGGCCAGCCTGGAGCCTGCAA...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCATGTCAGATGCAATACTGGCGTaGTGTGGAATGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: HPLSLLNSKSIPGFILMSDAILA*CGMRGW
Trigger: CCAGCCCCTCATTCCACACCACGCCAGTATTGCATC...TGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CTTGGGGTCAGCTTTCTGATTTGCAACATGAAGCTGGCTGAATTCCACGAGGTATCCCAGACACCACCATaGAGGCTGCTACTGTTACCA +
Preference number: 4 (lower is better)
Translates to: LGVSFLICNMKLAEFHEVSQTPP*RLLLLP
Trigger: TGGTAACAGTAGCAGCCTCCATGGTGGTGTCTGGGA...TACCTCGTGGAATTCAGCCAGCTTCATGTTGCAAATCAGAAAGCTGACCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
3UTR CAA 72 bp CACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTaGTCAGGTGTCCAATGTACAACTTTAATTTACTTC +
Preference number: 4 (lower is better)
Translates to: HGGSGGLGHGRG*SGVQCTTLIYF
Trigger: GAAGTAAATTAAAGTTGTACATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR CAA 72 bp AAGCTCACACTGGGCTTCTTCAGTTACAAAACCCCGTaGGGATCACACCCACTCTTCTTCGTGCCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: KLTLGFFSYKTP*GSHPLFFVPSL
Trigger: TAAAGAGGGCACGAAGAAGAGTGGGTGTGATCCCAACGGGGTTTTGTAACTGAAGAAGCCCAGTGTGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCAAGGTCAGGAAAGGTGTaGGCAGAAAATCAACAACAA +
Preference number: 4 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPRSGKV*AENQQQ
Trigger: TTGTTGTTGATTTTCTGCTCACACCTTTCCTGACCT...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp TCTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGAGGTCAGGAAAGGTGTaGGCAGAAAATCAACAACAA +
Preference number: 4 (lower is better)
Translates to: SGPLEASSQPVELQVHSWRSGKV*AENQQQ
Trigger: TTGTTGTTGATTTTCTGCTCACACCTTTCCTGACCT...CCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp TCTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGGCTTTTAGGTGTTTCTaGACCCACATTTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: SGPLEASSQPVELQVHSWAFRCF*THIFMV
Trigger: GACCATGAAAATGTGGGTTCAGAAACACCTAAAAGC...CCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp AAAGCTGCAGGCGGGGACAACAGGGTCTCATATGTCAACTTTGTATGTTCTCTTCTCACAGGAGGGAGGTaGTGCTCTCCAAATGCTATG +
Preference number: 4 (lower is better)
Translates to: KAAGGDNRVSYVNFVCSLLTGGR*CSPNAM
Trigger: CATAGCATTTGGAGAGCATCACCTCCCTCCTGTGAG...AAGAGAACATACAAAGTTGACATATGAGACCCTGTTGTCCCCGCCTGCAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGCTCACAGGAGGGAGGTaGTGCTCTCCAAATGCTATG +
Preference number: 4 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVLTGGR*CSPNAM
Trigger: CATAGCATTTGGAGAGCATCACCTCCCTCCTGTGAG...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTGTGTCTGCAGATCCATaGTTGTGTTATCTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSVSADP*LCYLSP
Trigger: AGGCGAGAGATAACACAATCATGGATCTGCAGACAC...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp CCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACGGCTCCAGAAGGTCTTaGTGCTATTCATTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: PAFQCWELSTWFTGTAMNGSRRS*CYSLKN
Trigger: GTTCTTCAATGAATAGCATCAAGACCTTCTGGAGCC...GTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp ACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCTTTAGGGTCTGCTTTTaGGTCTCAATACGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TMVCYLLKNGVGKLLQFCFRVCF*VSIRSS
Trigger: GGAGCTGCGTATTGAGACTCAAAAGCAGACCCTAAA...GCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
CDS-3UTR TCA 90 bp AAAGCTGCAGGCGGGGACAACAGGGTCTCATATGTCAACTTTGTATGTTCTCTTTGGCCAATCTCAGCCTaGAGACCAGCCGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: KAAGGDNRVSYVNFVCSLWPISA*RPAAFF
Trigger: AAAGAAAGCGGCTGGTCTTCAGGCTGAGATTGGCCA...AAGAGAACATACAAAGTTGACATATGAGACCCTGTTGTCCCCGCCTGCAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000589028.5
CDS-3UTR TCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCTGGCCAATCTCAGCCTaGAGACCAGCCGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGWPISA*RPAAFF
Trigger: AAAGAAAGCGGCTGGTCTTCAGGCTGAGATTGGCCA...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000542302.6
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp GTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCATCCAACATGTCCTTaGGGTCATGTATCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: VCYLLKNGVGKLLQFCIVHPTCP*GHVSLQ
Trigger: CTGGAGAGATACATGACCTCAAGGACATGTTGGATG...GACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCTTTTCAATCTTCTTCTaGAGAACATTAACCTTCCGC +
Preference number: 4 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFFSIFF*RTLTFR
Trigger: GCGGAAGGTTAATGTTCTTCAGAAGAAGATTGAAAA...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACCAGCCTGCAAGGATTTaGCCCGTTCTTTCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: TPQYDNVNSLKQERLVENQPARI*PVLSSC
Trigger: GCAGCTTGAAAGAACGGGTCAAATCCTTGCAGGCTG...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCGCCTTGCAACAGGCTaGCTTTTTCCTTCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: DNGLLSAEEWRWQTPAVLRLATG*LFPSSL
Trigger: AAGACTTGAAGGAAAAAGTCAGCCTGTTGCAAGGCG...CAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCGCCTTGCAACAGGCTaGCTTTTTCCTTCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVRLATG*LFPSSL
Trigger: AAGACTTGAAGGAAAAAGTCAGCCTGTTGCAAGGCG...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTCGCCTTGCAACAGGCTaGCTTTTTCCTTCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSRLATG*LFPSSL
Trigger: AAGACTTGAAGGAAAAAGTCAGCCTGTTGCAAGGCG...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GGTGGCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTCCTTTTTCAGTCCTaGGGATGCCAGAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: GGSSSERFDPLSTLDIKKVLFQS*GCQRRS
Trigger: GCTTCTTCTCTGGCATCCTCAGGACTGAAAAAGGAC...CTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGCCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp ACACACCTTAAGATCGGGGAGGGGAAGGACATGCTATTTACTGCTTCAACTCCAGTCCTTTTTCAGTCCTaGGGATGCCAGAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: THLKIGEGKDMLFTASTPVLFQS*GCQRRS
Trigger: GCTTCTTCTCTGGCATCCTCAGGACTGAAAAAGGAC...TGGAGTTGAAGCAGTAAATAGCATGTCCTTCCCCTCCCCGATCTTAAGGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CTAGGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCATCTTTGTACCTGGTaGTCTCTCTCTCCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: LGCRDNGLLSAEEWRWQTHLCTW*SLSPSA
Trigger: AGCACTTGGAGAGAGAGATCACCAGGTACAAAGATG...AGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGCATCTTTGTACCTGGTaGTCTCTCTCTCCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: EMLTLLPFSAGSFLHGLRHLCTW*SLSPSA
Trigger: AGCACTTGGAGAGAGAGATCACCAGGTACAAAGATG...CCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCATCTTTGTACCTGGTaGTCTCTCTCTCCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVHLCTW*SLSPSA
Trigger: AGCACTTGGAGAGAGAGATCACCAGGTACAAAGATG...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTCATCTTTGTACCTGGTaGTCTCTCTCTCCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSHLCTW*SLSPSA
Trigger: AGCACTTGGAGAGAGAGATCACCAGGTACAAAGATG...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGCTGAGAGCTGTCGTTaGGATTGTCCTCCCGTCGTC +
Preference number: 4 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVAESCR*DCPPVV
Trigger: GACGACGGGAGGACAATCTCAACGACAGCTCTCAGC...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp GTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGCGAAGATTAGTCAAGTaGGTTTCCTTTTCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: VGTMVCYLLKNGVGKLLQRRLVK*VSFSAR
Trigger: TCTGGCAGAAAAGGAAACTCACTTGACTAATCTTCG...CTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp TGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCTGGAATGGGAGGATTTaGAGTGGTCATCCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: WRHPLSLLNSKSIPGFILWNGRI*SGHPRS
Trigger: ACTACGAGGATGACCACTTCAAATCCTCCCATTCCA...GAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTAGGAAGCTGGTGGAGTaGGTCCACGGAGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFRKLVE*VHGGSG
Trigger: CCCTGATCCTCCGTGGACTCACTCCACCAGCTTCCT...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp CCTAGTGTGATGGGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACTTCTCTAACTCATCCTaGAGCTGCCCCCGGGTCATC +
Preference number: 4 (lower is better)
Translates to: PSVMGVGHLVKCWFNDLDFSNSS*SCPRVI
Trigger: GATGACCCGGGGGCAGCTTCAGGATGAGTTAGAGAA...GTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCCCATCACACTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp ACACACCTTAAGATCGGGGAGGGGAAGGACATGCTATTTACTGCTTCAACTCCATGGTCTGCTATCTGCTaGAGAATGGCGTTGGCAAAC +
Preference number: 4 (lower is better)
Translates to: THLKIGEGKDMLFTASTPWSAIC*RMALAN
Trigger: GTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCA...TGGAGTTGAAGCAGTAAATAGCATGTCCTTCCCCTCCCCGATCTTAAGGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TCTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTCACACTTCTTCAAGTaGGCAAGTTGGGATGAAGTT +
Preference number: 4 (lower is better)
Translates to: SGPLEASSQPVELQVHSWSHFFK*ASWDEV
Trigger: AACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGA...CCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp GTGCACGTGCATCCCAGACACCACCATGGAGGCTGCTACTGTTACCAAAAGGAATCACACTTCTTCAAGTaGGCAAGTTGGGATGAAGTT +
Preference number: 4 (lower is better)
Translates to: VHVHPRHHHGGCYCYQKESHFFK*ASWDEV
Trigger: AACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGA...TTCCTTTTGGTAACAGTAGCAGCCTCCATGGTGGTGTCTGGGATGCACGTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACAAATCAGAGGACAGGAGGTaGGAGGCTCCTCTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: STWFTGTAMNRIEVTDHKSEDRR*EAPLLH
Trigger: ATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGA...TTTGTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTATCAGAGGACAGGAGGTaGGAGGCTCCTCTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVSEDRR*EAPLLH
Trigger: ATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGA...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp ATAAAGCGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGATCCTCTCAGCCTGTTaGACTCCAAGTCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: IKRDANTPAFQCWELSTWILSAC*TPSPFL
Trigger: CAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGAT...CCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCGCTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GCTACGTCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCGCAAAGCTAGCAGGGTaGGTGAGGGATCACAACTTC +
Preference number: 4 (lower is better)
Translates to: ATSLTMPIPSLICSLGVSAKLAG*VRDHNF
Trigger: GAAGTTGTGATCCCTCACTCACCCTGCTAGCTTTGC...GCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGACGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CTTGGGGTCAGCTTTCTGATTTGCAACATGAAGCTGGCTGAATTCCACGAGGTAACATCTCTCCCTCACTaGGAAGTGGCCTTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: LGVSFLICNMKLAEFHEVTSLPH*EVAFSR
Trigger: CCTTGAAAAGGCCACTTCTCAGTGAGGGAGAGATGT...TACCTCGTGGAATTCAGCCAGCTTCATGTTGCAAATCAGAAAGCTGACCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTAGACCCCCAAACTCATaGATTCCATTAGGGAACTTT +
Preference number: 4 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTRPPNS*IPLGNF
Trigger: AAAGTTCCCTAATGGAATTCATGAGTTTGGGGGTCT...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp ATAAAGCGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGCAACATGAAGCTGGCTaGATTCCACGAGGTACATGC +
Preference number: 4 (lower is better)
Translates to: IKRDANTPAFQCWELSTWQHEAG*IPRGTC
Trigger: GCATGTACCTCGTGGAATTCAGCCAGCTTCATGTTG...CCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCGCTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GGTGGCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGTCTTATCAGGAGATGTaGGTGTCTGCTGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: GGSSSERFDPLSTLDIKKSYQEM*VSAGFW
Trigger: CCAGAACCCAGCAGACACTCACATCTCCTGATAAGA...CTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCTTTCTGGGGAAGTTCCTGGACTaGTGGGGCTGTGCTGACTCT +
Preference number: 4 (lower is better)
Translates to: SLTMPIPSLICSLGVSFLGKFLD*WGCADS
Trigger: AGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCC...CAGAAAGCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp ATTTATGCTAGAAGAAGGTTCCAGGCAATGCACGAGGCTGAGGTTCAGAGAAGAGGCCACGTTTATTACTaGACTCCTAGCCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: IYARRRFQAMHEAEVQRRGHVYY*TPSQPP
Trigger: TGGAGGCTGGCTAGGAGTTCAGTAATAAACGTGGCC...TCTTCTCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTCTTCTAGCATAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGGTGCCCTCTTTATGGTaGCATTGGTTTGGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: RQSKMADVETVLESHFFKVPSLW*HWFGVQ
Trigger: CTGCACCCCAAACCAATGTCACCATAAAGAGGGCAC...CTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTGAGATACCTCATCAATaGTTCAATGAGTACCGGGGG +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSEIPHQ*FNEYRG
Trigger: CCCCCGGTACTCATTGAATCATTGATGAGGTATCTC...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTCTAAAACCCAAGTGTaGGGAAGTCTGAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: AGMSHRIHYISPSLRSGLSKTQV*GSLRAT
Trigger: TGTGGCTCTCAGACTTCCTCACACTTGGGTTTTAGA...AAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GCAGTTGTATGCCCATATGAAACCATGACCACTAGGAGAGGGGCATGGAATGACTTTAAGACATTCCTTTaGGTGGTTCACGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: AVVCPYETMTTRRGAWNDFKTFL*VVHVPS
Trigger: GGAGGGGACGTGAACCACTCAAAGGAATGTCTTAAA...GTCATTCCATGCCCCTCTCCTAGTGGTCATGGTTTCATATGGGCATACAACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GTACATGCAGATGTCAGGAAATGGCCACCCACAAGTAGATACTCAGAGCCCCTCACTGCCCCAATTCTCTaGATCACACAGACAATATCG +
Preference number: 4 (lower is better)
Translates to: VHADVRKWPPTSRYSEPLTAPIL*ITQTIS
Trigger: CGATATTGTCTGTGTGATTCAGAGAATTGGGGCAGT...GAGGGGCTCTGAGTATCTACTTGTGGGTGGCCATTTCCTGACATCTGCATGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTCTACCCAGAGGTCCTaGACATGTATAGGAAAATCC +
Preference number: 4 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLSTQRS*TCIGKS
Trigger: GGATTTTCCTATACATGTTCAGGACCTCTGGGTAGA...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp ACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCTCACTTGCCTTGAGGTaGGACTTTCCAACTCAGCTA +
Preference number: 4 (lower is better)
Translates to: TMVCYLLKNGVGKLLQFCSLALR*DFPTQL
Trigger: TAGCTGAGTTGGAAAGTCTCACCTCAAGGCAAGTGA...GCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp CTTGGGGTCAGCTTTCTGATTTGCAACATGAAGCTGGCTGAATTCCACGAGGTAAAAGGGTTTTCCCACTaGCACCTCCAACACTGCTTC +
Preference number: 4 (lower is better)
Translates to: LGVSFLICNMKLAEFHEVKGFSH*HLQHCF
Trigger: GAAGCAGTGTTGGAGGTGGCAGTGGGAAAACCCTTT...TACCTCGTGGAATTCAGCCAGCTTCATGTTGCAAATCAGAAAGCTGACCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTACATGCAGATGTCAGGAAATGGCCACCCACAAGTAGATACTCAGAGCCCCTCGTGATGCTCTCCAAATaGTATGGTGTCACTAGCAAC +
Preference number: 4 (lower is better)
Translates to: VHADVRKWPPTSRYSEPLVMLSK*YGVTSN
Trigger: GTTGCTAGTGACACCATAGCATTTGGAGAGCATCAC...GAGGGGCTCTGAGTATCTACTTGTGGGTGGCCATTTCCTGACATCTGCATGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCGTGATGCTCTCCAAATaGTATGGTGTCACTAGCAAC +
Preference number: 4 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFVMLSK*YGVTSN
Trigger: GTTGCTAGTGACACCATAGCATTTGGAGAGCATCAC...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp TTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACATCCGTGAGGTACAGTGGATaGCATACTCACAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: FDPLSTLDIKKVSVETTSVRYSG*HTHRRE
Trigger: CTCCCTCCTGTGAGTATGGCATCCACTGTACCTCAC...GGATGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp AGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGGTGAGGTACAGTGGATaGCATACTCACAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: RQSKMADVETVLESHFFKVRYSG*HTHRRE
Trigger: CTCCCTCCTGTGAGTATGGCATCCACTGTACCTCAC...CTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGGTGAGGTACAGTGGATaGCATACTCACAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVVRYSG*HTHRRE
Trigger: CTCCCTCCTGTGAGTATGGCATCCACTGTACCTCAC...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp CAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATTGAAGAACTCAATTTaGTCTCCTTTACTTCCACAT +
Preference number: 4 (lower is better)
Translates to: QAGLDEDSDLGRTSAPKPLKNSI*SPLLPH
Trigger: ATGTGGAAGTAAAGGAGAGCAAATTGAGTTCTTCAA...TGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCGTTCGCCAGTCCTGCTaGTACTATCCTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: AERQSKMADVETVLESHFVRQSC*YYPAET
Trigger: TGTTTCAGCAGGATAGTAGCAGCAGGACTGGCGAAC...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp AGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTGTGCATCTCTGCCTCTaGCAGTCGTCTTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: RYVSQNPLHLSLTEKWPFVHLCL*QSSCSL
Trigger: GAGAGAACAAGACGACTGGCAGAGGCAGAGATGCAC...AAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGGTGCATCTCTGCCTCTaGCAGTCGTCTTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVVHLCL*QSSCSL
Trigger: GAGAGAACAAGACGACTGGCAGAGGCAGAGATGCAC...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp ACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCGTTTCTAGCTTTGTCTaGAGGGCGAGTAGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: TMVCYLLKNGVGKLLQFCVSSFV*RASSSV
Trigger: CACAGAACTACTCGCCCTGCAGACAAAGCTAGAAAC...GCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
CDS-3UTR GCA 90 bp ACACACCTTAAGATCGGGGAGGGGAAGGACATGCTATTTACTGCTTCAACTCCATTGGTGGTGTCAGCCTaGAAGGATTTGACCCGTTCT +
Preference number: 4 (lower is better)
Translates to: THLKIGEGKDMLFTASTPLVVSA*KDLTRS
Trigger: AGAACGGGTCAAATCCTTGCAGGCTGACACCACCAA...TGGAGTTGAAGCAGTAAATAGCATGTCCTTCCCCTCCCCGATCTTAAGGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGTCATCTCTGTCCCTCTaGTCCTTTAAGCGTTCAATT +
Preference number: 4 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLSSLSL*SFKRSI
Trigger: AATTGAACGCTTAAAGGAGCAGAGGGACAGAGATGA...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp TCTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTCATCTCTGTCCCTCTaGTCCTTTAAGCGTTCAATT +
Preference number: 4 (lower is better)
Translates to: SGPLEASSQPVELQVHSWSSLSL*SFKRSI
Trigger: AATTGAACGCTTAAAGGAGCAGAGGGACAGAGATGA...CCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTCTGAAAGGTCGCCTTaGAACAGGCTGACTTTTTCC +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSSERSP*NRLTFS
Trigger: GGAAAAAGTCAGCCTGTTGCAAGGCGACCTTTCAGA...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp CTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTTCTGAAAGGTCGCCTTaGAACAGGCTGACTTTTTCC +
Preference number: 4 (lower is better)
Translates to: LSAEEWRWQTPAVLHCPVSERSP*NRLTFS
Trigger: GGAAAAAGTCAGCCTGTTGCAAGGCGACCTTTCAGA...AACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGCCAGAGAAGAAGCATaGTCTTTCAGATCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLAREEA*SFRSKS
Trigger: ACTTTTGGATCTGAAAGAGCATGCTTCTTCTCTGGC...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTTTCTGGTCTTTCACTTaGCTTTCCAACTCAGCTATC +
Preference number: 4 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTFWSFT*LSNSAI
Trigger: GATAGCTGAGTTGGAAAGGCAAGTGAAAGACCAGAA...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp CTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCTGGTCTTTCACTTaGCTTTCCAACTCAGCTATC +
Preference number: 4 (lower is better)
Translates to: LVHWRHPLSLLNSKSIPGFWSFT*LSNSAI
Trigger: GATAGCTGAGTTGGAAAGGCAAGTGAAAGACCAGAA...ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp CTAACTCATCCTGAAGCTGCCCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGCTTGTGCTTCAGATTTaGTACCTTCTTATTCTGGTC +
Preference number: 4 (lower is better)
Translates to: LTHPEAAPGSSSAAHSPKLVLQI*YLLILV
Trigger: GACCAGAATAAGAAGGTAGCAAATCTGAAGCACAAG...CTTGGGAGAATGAGCTGCAGAAGATGACCCGGGGGCAGCTTCAGGATGAGTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp CATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTATAGGACACCATTTCCCGCTCTaGAGTTATCTGTACACTTTC +
Preference number: 4 (lower is better)
Translates to: HLLQLILPSRLVIVQVIGHHFPL*SYLYTF
Trigger: GAAAGTGTACAGATAACTGCAGAGCGGGAAATGGTG...TCCTATAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000440394.7
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCGTGAGTTTCCTTTTCTaGCAGAGACTGCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: AERQSKMADVETVLESHFVSFLF*QRLLGG
Trigger: TCCACCCAGCAGTCTCTGGCAGAAAAGGAAACTCAC...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp AGGGTCACGCTATGTTGCCCTGGCTGGTGCTCTTTCAACCTCACATGTTCTTCAGTGTTTCCTTCTCTCTaGCCGAAGATTAGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: RVTLCCPGWCSFNLTCSSVFPSL*PKISQV
Trigger: CACTTGACTAATCTTCGGGCAGAGAGAAGGAAACAC...TGAAGAACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACATAGCGTGACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp CCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTGGTTTGGGGTGCAGATCTTGCCAGAAGAGCTTCTTaGTTCATCTCCAGAACTTCC +
Preference number: 4 (lower is better)
Translates to: PTLLRALFMVTLVWGADLARRAS*FISRTS
Trigger: GGAAGTTCTGGAGATGAAGCAAGAAGCTCTTCTGGC...AAGATCTGCACCCCAAACCAATGTCACCATAAAGAGGGCACGAAGAAGAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTGCCAGAAGAGCTTCTTaGTTCATCTCCAGAACTTCC +
Preference number: 4 (lower is better)
Translates to: RMALANSCSSALSRSPFSARRAS*FISRTS
Trigger: GGAAGTTCTGGAGATGAAGCAAGAAGCTCTTCTGGC...AGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GGTGGCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTCTGCTGCTTAAGCTaGTGTACCAGACGATCCTTC +
Preference number: 4 (lower is better)
Translates to: GGSSSERFDPLSTLDIKKVCCLS*CTRRSF
Trigger: GAAGGATCGTCTGGTACAGCAGCTTAAGCAGCAGAC...CTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp CTAGGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCGATTTTGCGTCTGCTaGTTAAGCTGCTGTACCAGA +
Preference number: 4 (lower is better)
Translates to: LGCRDNGLLSAEEWRWQTRFCVC*LSCCTR
Trigger: TCTGGTACAGCAGCTTAAGCAGCAGACGCAAAATCG...AGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GGTGGCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGTGTTGCCCTGGCTGGTaGTCTTTCAACCTCACATGT +
Preference number: 4 (lower is better)
Translates to: GGSSSERFDPLSTLDIKKCCPGW*SFNLTC
Trigger: ACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACA...CTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp CATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCATGTCAGAAGGTTCCAGGCAATaGACGAGGCTGAGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: HPLSLLNSKSIPGFILMSEGSRQ*TRLRFR
Trigger: TCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTC...TGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCAGGACATGCTATTTACTaGTTCAACTCCAGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPGHAIY*FNSSRY
Trigger: ATACCTGCTGGAGTTGAAGCAGTAAATAGCATGTCC...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTATTCCACGAGGTACATaGAGATGTCAGGAAATGGCC +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSIPRGT*RCQEMA
Trigger: GGCCATTTCCTGACATCTGCATGTACCTCGTGGAAT...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGATTCCACGAGGTACATaGAGATGTCAGGAAATGGCC +
Preference number: 4 (lower is better)
Translates to: RDANTPAFQCWELSTWFTIPRGT*RCQEMA
Trigger: GGCCATTTCCTGACATCTGCATGTACCTCGTGGAAT...CGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGATACCTTCATTGATTTaGAGTCTTGGGGTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: LTTSGFPIKQGQEDSSRAIPSLI*SLGVSF
Trigger: AAAGCTGACCCCAAGACTGCAAATCAATGAAGGTAT...CGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355446.9
ENST00000440394.7
CDS-3UTR GCA 90 bp TTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACATCCGGAGATGTGAGTGTCTaGTGGGTTCTGGTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: FDPLSTLDIKKVSVETTSGDVSV*WVLVVE
Trigger: CTCTACCACCAGAACCCAGCAGACACTCACATCTCC...GGATGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACGGAGATGTGAGTGTCTaGTGGGTTCTGGTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: TPQYDNVNSLKQERLVENGDVSV*WVLVVE
Trigger: CTCTACCACCAGAACCCAGCAGACACTCACATCTCC...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp ACACACCTTAAGATCGGGGAGGGGAAGGACATGCTATTTACTGCTTCAACTCCAACTCCTGCCTTTCAGTaGTGGGAGCTTTCTACATGG +
Preference number: 4 (lower is better)
Translates to: THLKIGEGKDMLFTASTPTPAFQ*WELSTW
Trigger: CCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGT...TGGAGTTGAAGCAGTAAATAGCATGTCCTTCCCCTCCCCGATCTTAAGGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTAGGCATGGCCTCGCCTaGTGTCTTGGTTCCACCGTG +
Preference number: 4 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFRHGLA*CLGSTV
Trigger: CACGGTGGAACCAAGACAGCAGGCGAGGCCATGCCT...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTACATGCAGATGTCAGGAAATGGCCACCCACAAGTAGATACTCAGAGCCCCTCGTCAAGAAGATTCCTTaGTGTTCACAGAGACCAGAC +
Preference number: 4 (lower is better)
Translates to: VHADVRKWPPTSRYSEPLVKKIP*CSQRPD
Trigger: GTCTGGTCTCTGTGAACAGCAAGGAATCTTCTTGAC...GAGGGGCTCTGAGTATCTACTTGTGGGTGGCCATTTCCTGACATCTGCATGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCAAACTGCATCCACTCTaGCCTACAGCACGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGKLHPL*PTARRP
Trigger: TGGCCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTT...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CTAACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAAACTGCATCCACTCTaGCCTACAGCACGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: LTPQYDNVNSLKQERLVEKLHPL*PTARRP
Trigger: TGGCCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTT...CTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TATGCTAGAAGAAGGTTCCAGGCAATGCACGAGGCTGAGGTTCAGAGAAGACGACTGAAAGCTACAAACTaGATCCACTCTGCCCTACAG +
Preference number: 4 (lower is better)
Translates to: YARRRFQAMHEAEVQRRRLKATN*IHSALQ
Trigger: CTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAG...TCGTCTTCTCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTCTTCTAGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CTAACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGTCTGCAGAGGGTGCCTaGTGCATTGCAGTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LTPQYDNVNSLKQERLVESAEGA*CIAVSS
Trigger: AGAAGAGACTGCAATGCAGCAGGCACCCTCTGCAGA...CTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGACTCTACAGACTTTAAATTCTGATTCTCGTTCCTTTTaGTCGGCAGGTGTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: VGSSWTDGAVLTLQTLNSDSRSF*SAGVSC
Trigger: GCAAGAGACACCTGCCGAGCAAAAGGAACGAGAATC...AGAATTTAAAGTCTGTAGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATCAAATCCTGGCACAACTaGGAGGCTCTGAGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: KAPIVILEHSALWSIGGIKSWHN*EALSPR
Trigger: TCTGGGGCTCAGAGCCTCGCAGTTGTGCCAGGATTT...GATGCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGCTGCAGTAGATGGATaGAATACTGGCGTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: DGRCRNGAGITLLQVSKLAAVDG*NTGVVW
Trigger: CCACACCACGCCAGTATTGCATCCATCTACTGCAGC...CAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACGCTGCAGTAGATGGATaGAATACTGGCGTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: TPQYDNVNSLKQERLVENAAVDG*NTGVVW
Trigger: CCACACCACGCCAGTATTGCATCCATCTACTGCAGC...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTGCTCCTCCACTAAAGTaGAACACTTCTCTTCTGACG +
Preference number: 4 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVAPPLK*NTSLLT
Trigger: CGTCAGAAGAGAAGTGTTGCACTTTAGTGGAGGAGC...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTACTACAAGGGGGCAGGTaGTCCTCAGCTCCTCCACTA +
Preference number: 4 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVLQGGR*SSAPPL
Trigger: TAGTGGAGGAGCTGAGGAGCACCTGCCCCCTTGTAG...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACTTCTGGTCTTTCACTTaGCTTGAGGTGAGACTTTCC +
Preference number: 4 (lower is better)
Translates to: PAFQCWELSTWFTGTAMNFWSFT*LEVRLS
Trigger: GGAAAGTCTCACCTCAAGGCAAGTGAAAGACCAGAA...GTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440394.7
CDS-3UTR CCA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGTGAGGTGTCTCTATaGCTACAAGTTGGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPCEVSL*LQVGLR
Trigger: CCTTAAACCAACTTGTAGCCATAGAGACACCTCACA...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACGGGAGTGAGGTACAGTaGATGCCATACTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: TPQYDNVNSLKQERLVENGSEVQ*MPYSQE
Trigger: CTCCTGTGAGTATGGCATCCACTGTACCTCACTCCC...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AAAGCTGCAGGCGGGGACAACAGGGTCTCATATGTCAACTTTGTATGTTCTCTTGGGAGTGAGGTACAGTaGATGCCATACTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: KAAGGDNRVSYVNFVCSLGSEVQ*MPYSQE
Trigger: CTCCTGTGAGTATGGCATCCACTGTACCTCACTCCC...AAGAGAACATACAAAGTTGACATATGAGACCCTGTTGTCCCCGCCTGCAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CTAGGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTTTCCTTCTTCAGCTCTaGGCTCCAGAAGGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: LGCRDNGLLSAEEWRWQTFLLQL*APEGLD
Trigger: ATCAAGACCTTCTGGAGCCCAGAGCTGAAGAAGGAA...AGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CCA 90 bp TATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCATCCGCAATTCATCCTaGAGAGCCTGGATTGTCATC +
Preference number: 4 (lower is better)
Translates to: YLLKNGVGKLLQFCIVPFIRNSS*RAWIVI
Trigger: GATGACAATCCAGGCTCTCCAGGATGAATTGCGGAT...GAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
CDS-3UTR CCA 90 bp GCAGTTGTATGCCCATATGAAACCATGACCACTAGGAGAGGGGCATGGAATGACATCCGCAATTCATCCTaGAGAGCCTGGATTGTCATC +
Preference number: 4 (lower is better)
Translates to: AVVCPYETMTTRRGAWNDIRNSS*RAWIVI
Trigger: GATGACAATCCAGGCTCTCCAGGATGAATTGCGGAT...GTCATTCCATGCCCCTCTCCTAGTGGTCATGGTTTCATATGGGCATACAACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTGAAGAAACAGCTCTTTaGCCTGCCGCTCATGCTCAG +
Preference number: 4 (lower is better)
Translates to: RYVSQNPLHLSLTEKWPFEETAL*PAAHAQ
Trigger: CTGAGCATGAGCGGCAGGCCAAAGAGCTGTTTCTTC...AAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGAAGAAACAGCTCTTTaGCCTGCCGCTCATGCTCAG +
Preference number: 4 (lower is better)
Translates to: DGRCRNGAGITLLQVSKLEETAL*PAAHAQ
Trigger: CTGAGCATGAGCGGCAGGCCAAAGAGCTGTTTCTTC...CAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCCGTCTTGTTCTCTCATaGTCTTCCTCGGTAGCCTTG +
Preference number: 4 (lower is better)
Translates to: AERQSKMADVETVLESHFRLVLS*SSSVAL
Trigger: CAAGGCTACCGAGGAAGACCATGAGAGAACAAGACG...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp TCTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGGCAGAGCTTTTGTTTTaGCAGAATCAGGAGCATTCT +
Preference number: 4 (lower is better)
Translates to: SGPLEASSQPVELQVHSWAELLF*QNQEHS
Trigger: AGAATGCTCCTGATTCTGCCAAAACAAAAGCTCTGC...CCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCAGCAGAGCTTTTGTTTTaGCAGAATCAGGAGCATTCT +
Preference number: 4 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPAELLF*QNQEHS
Trigger: AGAATGCTCCTGATTCTGCCAAAACAAAAGCTCTGC...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCCACTCATCTCTGGACTaGCTCTGGCTTCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGHSSLD*LWLPML
Trigger: CAGCATTGGAAGCCAGAGCCAGTCCAGAGATGAGTG...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGCACTCATCTCTGGACTaGCTCTGGCTTCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: RQSKMADVETVLESHFFKHSSLD*LWLPML
Trigger: CAGCATTGGAAGCCAGAGCCAGTCCAGAGATGAGTG...CTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp GCTACGTCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCTCGGTCACTCATCTCTaGACTGGCTCTGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: ATSLTMPIPSLICSLGVSSVTHL*TGSGFQ
Trigger: TTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACCGA...GCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGACGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTCGGTCACTCATCTCTaGACTGGCTCTGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVSVTHL*TGSGFQ
Trigger: TTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACCGA...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp ACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCCGATCAACTTCTGCCTaGGCCTTGCTAGATTCATCT +
Preference number: 4 (lower is better)
Translates to: TMVCYLLKNGVGKLLQFCRSTSA*ALLDSS
Trigger: AGATGAATCTAGCAAGGCCCAGGCAGAAGTTGATCG...GCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCCCTGTTTTTCAGCATTaGTCCTGGCTGATTCCTCTT +
Preference number: 4 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFPVFQH*SWLIPL
Trigger: AAGAGGAATCAGCCAGGACCAATGCTGAAAAACAGG...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp TATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCGCTTTACCTTCTCCATaGCCATCAGTAACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: YLLKNGVGKLLQFCIVPFALPSP*PSVTPP
Trigger: TGGAGGAGTTACTGATGGCCATGGAGAAGGTAAAGC...GAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCATGTCACCAGAGACTGCTGGGTaGAGGACAGCTTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: HPLSLLNSKSIPGFILMSPETAG*RTALLS
Trigger: TGAAAGCAAAGCTGTCCTCCACCCAGCAGTCTCTGG...TGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp AAAGCTGCAGGCGGGGACAACAGGGTCTCATATGTCAACTTTGTATGTTCTCTTCCAGAGACTGCTGGGTaGAGGACAGCTTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: KAAGGDNRVSYVNFVCSLPETAG*RTALLS
Trigger: TGAAAGCAAAGCTGTCCTCCACCCAGCAGTCTCTGG...AAGAGAACATACAAAGTTGACATATGAGACCCTGTTGTCCCCGCCTGCAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACTCTGCCAGAGACTGCTaGGTGGAGGACAGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: LSTWFTGTAMNRIEVTDHSARDC*VEDSFA
Trigger: AGCAAAGCTGTCCTCCACCCAGCAGTCTCTGGCAGA...GTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp ACACACCTTAAGATCGGGGAGGGGAAGGACATGCTATTTACTGCTTCAACTCCAGCAGCCACTTCCTCTTaGGTCTTCTTCTTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: THLKIGEGKDMLFTASTPAATSS*VFFLED
Trigger: GTCCTCTAAGAAGAAGACCCAAGAGGAAGTGGCTGC...TGGAGTTGAAGCAGTAAATAGCATGTCCTTCCCCTCCCCGATCTTAAGGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CTTGGGGTCAGCTTTCTGATTTGCAACATGAAGCTGGCTGAATTCCACGAGGTACTGGATGATCTGGTCTaGGGAGGGCTTGTGATTTGT +
Preference number: 4 (lower is better)
Translates to: LGVSFLICNMKLAEFHEVLDDLV*GGLVIC
Trigger: ACAAATCACAAGCCCTCCCCAGACCAGATCATCCAG...TACCTCGTGGAATTCAGCCAGCTTCATGTTGCAAATCAGAAAGCTGACCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTAGTTCTAAGAGGGGCTaGATGATCTGGTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: RYVSQNPLHLSLTEKWPFSSKRG*MIWSGE
Trigger: CTCCCCAGACCAGATCATCCAGCCCCTCTTAGAACT...AAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGAGTTCTAAGAGGGGCTaGATGATCTGGTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: RQSKMADVETVLESHFFKSSKRG*MIWSGE
Trigger: CTCCCCAGACCAGATCATCCAGCCCCTCTTAGAACT...CTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp TCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACAAAAGGGGGTCTCGGTCATaGCAGAGGGTTGTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: STWFTGTAMNRIEVTDHKRGSRS*QRVVRC
Trigger: ACACCTGACAACCCTCTGCCATGACCGAGACCCCCT...TTTGTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACACCGCTGAAGAATGGCGTTaGCAAACTCCTGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: PQYDNVNSLKQERLVENTAEEWR*QTPAVL
Trigger: CAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGC...GGTGTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp TCCAGCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCTATCTGCTGAAGAATaGCGTTGGCAAACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SSRYVSQNPLHLSLTEKWLSAEE*RWQTPA
Trigger: TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAG...CCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCTATCTGCTGAAGAATaGCGTTGGCAAACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LSAEEWRWQTPAVLHCPVLSAEE*RWQTPA
Trigger: TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAG...AACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTATCTGCTGAAGAATaGCGTTGGCAAACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVLSAEE*RWQTPA
Trigger: TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAG...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CTAGGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCTATCTGCTGAAGAATaGCGTTGGCAAACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LGCRDNGLLSAEEWRWQTLSAEE*RWQTPA
Trigger: TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAG...AGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp TATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCTCTTTTCTTGGCTCCTaGGTTGACTACCTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: YLLKNGVGKLLQFCIVPFSFLGS*VDYLRL
Trigger: AAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGA...GAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTTCTTTTCTTGGCTCCTaGGTTGACTACCTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVSFLGS*VDYLRL
Trigger: AAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGA...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp ACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCTCTTTTCTTGGCTCCTaGGTTGACTACCTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: TMVCYLLKNGVGKLLQFCSFLGS*VDYLRL
Trigger: AAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGA...GCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTAGAAGTTTGTAGTGTTTaGTGCCAAGAAGGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: EWRWQTPAVLHCPVHLSLEVCSV*CQEGSG
Trigger: CCCGGAACCTTCTTGGCACCAAACACTACAAACTTC...TAGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp AAACCCCGTTGGGATCACACCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTGAAGTTTGTAGTGTTTaGTGCCAAGAAGGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: KPRWDHTHSSSCPLYGDIEVCSV*CQEGSG
Trigger: CCCGGAACCTTCTTGGCACCAAACACTACAAACTTC...AATGTCACCATAAAGAGGGCACGAAGAAGAGTGGGTGTGATCCCAACGGGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTACCCTTTATCTACCCTaGACATCAAGAAGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: LVHWRHPLSLLNSKSIPGTLYLP*TSRRLV
Trigger: CACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGT...ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp GAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGCTGCTGATGACCAGGTaGCAGTTCTTCAGAGAGATT +
Preference number: 4 (lower is better)
Translates to: EMLTLLPFSAGSFLHGLRLLMTR*QFFREI
Trigger: AATCTCTCTGAAGAACTGCCACCTGGTCATCAGCAG...CCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGAACACTCAGCTCTCTaGTCCATTGGAGGCATCCTC +
Preference number: 4 (lower is better)
Translates to: DGRCRNGAGITLLQVSKLEHSAL*SIGGIL
Trigger: GAGGATGCCTCCAATGGACCAGAGAGCTGAGTGTTC...CAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp CTAACTCATCCTGAAGCTGCCCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGACAAAGCATCTCATGTaGAAAGTAAGCAGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: LTHPEAAPGSSSAAHSPKTKHLM*KVSRRD
Trigger: GTCTCTTCTGCTTACTTTCCACATGAGATGCTTTGT...CTTGGGAGAATGAGCTGCAGAAGATGACCCGGGGGCAGCTTCAGGATGAGTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000588412.5
CDS-3UTR CCA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTCAAACAGGAGAGACTaGTGGAGAACACCTCACACC +
Preference number: 4 (lower is better)
Translates to: AERQSKMADVETVLESHFSNRRD*WRTPHT
Trigger: GGTGTGAGGTGTTCTCCACCAGTCTCTCCTGTTTGA...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAAGGCAGGCAGCCTCTTaGAGGTGTTCAGGGGAAACC +
Preference number: 4 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVRQAAS*RCSGET
Trigger: GGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCT...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGCTATTTACTGCTTCAACTCCAGCAGGTATGTCTCACAGAATCCACTACATCTAGGCAGGCAGCCTCTTaGAGGTGTTCAGGGGAAACC +
Preference number: 4 (lower is better)
Translates to: CYLLLQLQQVCLTESTTSRQAAS*RCSGET
Trigger: GGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCT...AGATGTAGTGGATTCTGTGAGACATACCTGCTGGAGTTGAAGCAGTAAATAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAAACTTCAGCAGCCACTaGGCTGCAGGAGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: SSERFDPLSTLDIKKVSVNFSSH*AAGAQD
Trigger: GTCCTGAGCTCCTGCAGCCCAGTGGCTGCTGAAGTT...TACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTGCAGATGTCAGGAAATaGCCACCCACAAGTAGATAC +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSADVRK*PPTSRY
Trigger: GTATCTACTTGTGGGTGGCCATTTCCTGACATCTGC...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACAAAGTGGTGGGAAGTTCCTaGACTGATGGGGCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: STWFTGTAMNRIEVTDHKVVGSS*TDGAVL
Trigger: CAGCACAGCCCCATCAGTCCAGGAACTTCCCACCAC...TTTGTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGTGGGAGCTTTCTACATaGTTTACGGGCACTGCAATG +
Preference number: 4 (lower is better)
Translates to: EMLTLLPFSAGSFLHGLRWELST*FTGTAM
Trigger: CATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCA...CCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCCAGCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGTGGGAGCTTTCTACATaGTTTACGGGCACTGCAATG +
Preference number: 4 (lower is better)
Translates to: SSRYVSQNPLHLSLTEKWWELST*FTGTAM
Trigger: CATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCA...CCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCAGTTGTATGCCCATATGAAACCATGACCACTAGGAGAGGGGCATGGAATGACCCTGCCTTTCAGTGCTaGGAGCTTTCTACATGGTTT +
Preference number: 4 (lower is better)
Translates to: AVVCPYETMTTRRGAWNDPAFQC*ELSTWF
Trigger: AAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG...GTCATTCCATGCCCCTCTCCTAGTGGTCATGGTTTCATATGGGCATACAACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCCCTGCCTTTCAGTGCTaGGAGCTTTCTACATGGTTT +
Preference number: 4 (lower is better)
Translates to: WRHPLSLLNSKSIPGFILPAFQC*ELSTWF
Trigger: AAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG...GAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCTAGTGTGATGGGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACGTCTTGGTTCCACCGTaGCCCCGTGAAGGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: PSVMGVGHLVKCWFNDLDVLVPP*PREGCY
Trigger: ATAACAGCCTTCACGGGGCCACGGTGGAACCAAGAC...GTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCCCATCACACTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGAAAGTCCACGTGGGTaGGATCTGGGCCACCTGCTT +
Preference number: 4 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVESPRG*DLGHLL
Trigger: AAGCAGGTGGCCCAGATCCCACCCACGTGGACTTTC...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGAAAGTCCACGTGGGTaGGATCTGGGCCACCTGCTT +
Preference number: 4 (lower is better)
Translates to: SSSERFDPLSTLDIKKVSESPRG*DLGHLL
Trigger: AAGCAGGTGGCCCAGATCCCACCCACGTGGACTTTC...ACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCGGCCTCACTCTGCAGAGGGTGCCTGCTGCATTGCAGTCTCTTCTCATCCTTCCATTTGGTTAAGTGTTaGTTCAATGATCTAGACTCA +
Preference number: 4 (lower is better)
Translates to: AASLCRGCLLHCSLFSSFHLVKC*FNDLDS
Trigger: TGAGTCTAGATCATTGAACCAACACTTAACCAAATG...GAAGGATGAGAAGAGACTGCAATGCAGCAGGCACCCTCTGCAGAGTGAGGCCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGTGGGAGTGGGACATTTaGTTAAGTGTTGGTTCAATG +
Preference number: 4 (lower is better)
Translates to: WFHSHVRGQEVRGSSAPWWEWDI*LSVGSM
Trigger: CATTGAACCAACACTTAACCAAATGTCCCACTCCCA...CCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGTTACAAAACCCCGTTaGGATCACACCCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: EMLTLLPFSAGSFLHGLRVTKPR*DHTHSS
Trigger: AGAAGAGTGGGTGTGATCCCAACGGGGTTTTGTAAC...CCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTCCCGCAAGTTCCTCATaGAAAACCAGACTTCAATGG +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSPASSS*KTRLQW
Trigger: CCATTGAAGTCTGGTTTTCCATGAGGAACTTGCGGG...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTGGTTTGGGGTGCAGATCTTCCCGCAAGTTCCTCATaGAAAACCAGACTTCAATGG +
Preference number: 4 (lower is better)
Translates to: PTLLRALFMVTLVWGADLPASSS*KTRLQW
Trigger: CCATTGAAGTCTGGTTTTCCATGAGGAACTTGCGGG...AAGATCTGCACCCCAAACCAATGTCACCATAAAGAGGGCACGAAGAAGAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTTTCCTCTCACAGGGAGAGGGATTGTTTCACAGCAGGGAGTAGGGGGAGCTGGCAGATGTTAAATTACTaGTATTTGCTGACACAGGGT +
Preference number: 4 (lower is better)
Translates to: VSSHRERDCFTAGSRGSWQMLNY*YLLTQG
Trigger: ACCCTGTGTCAGCAAATACCAGTAATTTAACATCTG...CCAGCTCCCCCTACTCCCTGCTGTGAAACAATCCCTCTCCCTGTGAGAGGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp ATAAAGCGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGAAAGAAGAGAGGAGGTaGGATGGGACAAAAACCCGC +
Preference number: 4 (lower is better)
Translates to: IKRDANTPAFQCWELSTWKEERR*DGTKTR
Trigger: GCGGGTTTTTGTCCCATCCCACCTCCTCTCTTCTTT...CCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCGCTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGGGAGGAGGGGAGTGTaGCTGCCCCATAGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: SSERFDPLSTLDIKKVSVGRRGV*LPHSLN
Trigger: ATTCAAGCTATGGGGCAGCCACACTCCCCTCCTCCC...TACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGCTATTTACTGCTTCAACTCCAGCAGGTATGTCTCACAGAATCCACTACATCTGGGAGGAGGGGAGTGTaGCTGCCCCATAGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: CYLLLQLQQVCLTESTTSGRRGV*LPHSLN
Trigger: ATTCAAGCTATGGGGCAGCCACACTCCCCTCCTCCC...AGATGTAGTGGATTCTGTGAGACATACCTGCTGGAGTTGAAGCAGTAAATAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTTGTATAGGAAAATCCTaGCACAACTGCGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVCIGKS*HNCEAL
Trigger: CAGAGCCTCGCAGTTGTGCCAGGATTTTCCTATACA...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACACTCACCCGTGCTGGGTaGTCACTGGAAGAGATAGCA +
Preference number: 4 (lower is better)
Translates to: RFDPLSTLDIKKVSVETTLTRAG*SLEEIA
Trigger: TGCTATCTCTTCCAGTGACCACCCAGCACGGGTGAG...TGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AAGGCTGTTATCACACCGCAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTAATACTGGCGTGGTGTaGAATGAGGGGCTGGACCCA +
Preference number: 4 (lower is better)
Translates to: KAVITPQFFTLWWIKRDANTGVV*NEGLDP
Trigger: TGGGTCCAGCCCCTCATTCCACACCACGCCAGTATT...AGCATCTCGCTTTATCCACCATAACGTAAAGAACTGCGGTGTGATAACAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACAGATGCAATACTGGCGTaGTGTGGAATGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RFDPLSTLDIKKVSVETTDAILA*CGMRGW
Trigger: CCAGCCCCTCATTCCACACCACGCCAGTATTGCATC...TGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TATGCTAGAAGAAGGTTCCAGGCAATGCACGAGGCTGAGGTTCAGAGAAGACGATGTAGCTGCAGTAGATaGATGCAATACTGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: YARRRFQAMHEAEVQRRRCSCSR*MQYWRG
Trigger: ACCACGCCAGTATTGCATCCATCTACTGCAGCTACA...TCGTCTTCTCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTCTTCTAGCATA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACAGTCACAGGCCCCACTaGATATCCTGCAATGCCCGG +
Preference number: 4 (lower is better)
Translates to: GVGHLVKCWFNDLDSMRHSHRPH*ISCNAR
Trigger: CCGGGCATTGCAGGATATCCAGTGGGGCCTGTGACT...GTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTATAGGAAGCTGGTGGAGTAGTTCTAAGAGGGGCTaGATGATCGTTCTGAACAAA +
Preference number: 4 (lower is better)
Translates to: LILPSRLVIVQVIGSWWSSSKRG*MIVLNK
Trigger: TTTGTTCAGAACGATCATCCAGCCCCTCTTAGAACT...ACTCCACCAGCTTCCTATAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGAGGGCTTCCTCCAGCTGTCCAATCTTaGAGAAGTATCTTACACCAT +
Preference number: 4 (lower is better)
Translates to: DIGPGNASSQKQCHRGLPPAVQS*RSILHH
Trigger: ATGGTGTAAGATACTTCTTCAAGATTGGACAGCTGG...AGGAAGCCCTCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AAACCCCGTTGGGATCACACCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTAAAATGGGAACCTTGTaGGGTGTCTCTATGGCTACA +
Preference number: 4 (lower is better)
Translates to: KPRWDHTHSSSCPLYGDIKMGTL*GVSMAT
Trigger: TGTAGCCATAGAGACACCTCACAAGGTTCCCATTTT...AATGTCACCATAAAGAGGGCACGAAGAAGAGTGGGTGTGATCCCAACGGGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTATAGGAGCTTTTAGGTGTTTCTaGACCCACATTTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: HLLQLILPSRLVIVQVIGAFRCF*THIFMV
Trigger: GACCATGAAAATGTGGGTTCAGAAACACCTAAAAGC...TCCTATAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGACTCTACAGACTTTAAATTCTGTGTCTGCAGATCCATaGTTGTGTTATCTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: VGSSWTDGAVLTLQTLNSVSADP*LCYLSP
Trigger: AGGCGAGAGATAACACAATCATGGATCTGCAGACAC...AGAATTTAAAGTCTGTAGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGCTTGATGCTATTCATTaGAGAACTCAATTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: KQGQEDSSRALTTCSRMSLDAIH*RTQFAL
Trigger: GAGAGCAAATTGAGTTCTTCAATGAATAGCATCAAG...CGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp ATAAAGCGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTAGGGTCTGCTTTTaGGTCTCAATACGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: IKRDANTPAFQCWELSTWFRVCF*VSIRSS
Trigger: GGAGCTGCGTATTGAGACTCAAAAGCAGACCCTAAA...CCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTCGATTTCAGCATCTaGATTTCCTCTTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLFDFSI*ISSSRS
Trigger: AGACCTGGAAGAGGAAATTCAGATGCTGAAATCGAA...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp CATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTATAGGAGTGCTGTTTACTATCTaGGAACTGGTTTGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: HLLQLILPSRLVIVQVIGVLFTI*ELVCEC
Trigger: ACACTCACAAACCAGTTCTCAGATAGTAAACAGCAC...TCCTATAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
CDS-3UTR TCA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCCGCCTTGCAACAGGCTaGCTTTTTCCTTCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: AERQSKMADVETVLESHFRLATG*LFPSSL
Trigger: AAGACTTGAAGGAAAAAGTCAGCCTGTTGCAAGGCG...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp AGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGGTCCTTTTTCAGTCCTaGGGATGCCAGAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: RQSKMADVETVLESHFFKVLFQS*GCQRRS
Trigger: GCTTCTTCTCTGGCATCCTCAGGACTGAAAAAGGAC...CTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp CATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCATGTCAGTCCTTTTTCAGTCCTaGGGATGCCAGAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: HPLSLLNSKSIPGFILMSVLFQS*GCQRRS
Trigger: GCTTCTTCTCTGGCATCCTCAGGACTGAAAAAGGAC...TGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp TCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACAAATTCTCTAACTCATCCTaGAGCTGCCCCCGGGTCATC +
Preference number: 4 (lower is better)
Translates to: STWFTGTAMNRIEVTDHKFSNSS*SCPRVI
Trigger: GATGACCCGGGGGCAGCTTCAGGATGAGTTAGAGAA...TTTGTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTGGTCTGCTATCTGCTaGAGAATGGCGTTGGCAAAC +
Preference number: 4 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVWSAIC*RMALAN
Trigger: GTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCA...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTTCTTGGCTCCTGGGTTaGCTACCTCAGGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFSWLLG*LPQASP
Trigger: TGGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGA...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTTCACACTTCTTCAAGTaGGCAAGTTGGGATGAAGTT +
Preference number: 4 (lower is better)
Translates to: GCRDNGLLSAEEWRWQTPSHFFK*ASWDEV
Trigger: AACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGA...AGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCATCCTCTCAGCCTGTTaGACTCCAAGTCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: ERFDPLSTLDIKKVSVETILSAC*TPSPFL
Trigger: CAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGAT...GGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp GGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGGCTCCCAAGCCATCGTaGGGCCTGCTCACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: GVQCTTLIYFYFGQVLRGAPKPS*GLLTAP
Trigger: GGGAGCTGTGAGCAGGCCTCACGATGGCTTGGGAGC...CCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000588412.5
CDS-3UTR TCA 90 bp CTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACGCAAAGCTAGCAGGGTaGGTGAGGGATCACAACTTC +
Preference number: 4 (lower is better)
Translates to: LSTWFTGTAMNRIEVTDHAKLAG*VRDHNF
Trigger: GAAGTTGTGATCCCTCACTCACCCTGCTAGCTTTGC...GTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TGCTATTTACTGCTTCAACTCCAGCAGGTATGTCTCACAGAATCCACTACATCTGGCAATGCACGAGGCTaGGGTTCAGAGAAGACGAGT +
Preference number: 4 (lower is better)
Translates to: CYLLLQLQQVCLTESTTSGNARG*GSEKTS
Trigger: ACTCGTCTTCTCTGAACCTCAGCCTCGTGCATTGCC...AGATGTAGTGGATTCTGTGAGACATACCTGCTGGAGTTGAAGCAGTAAATAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAAGGCAAGCGGGTGACTaGGACCCCCAAACTCATGAA +
Preference number: 4 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVRQAGD*DPQTHE
Trigger: TTCATGAGTTTGGGGGTCTCAGTCACCCGCTTGCCT...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGGAAGCATCTCAGTAAGAGGTTTATGAGCAGAGTCCATTTAACCTTCGATAAGCTACAGGCAAGCGGGTaGCTGAGACCCCCAAACTCA +
Preference number: 4 (lower is better)
Translates to: RKHLSKRFMSRVHLTFDKLQASG*LRPPNS
Trigger: TGAGTTTGGGGGTCTCAGTCACCCGCTTGCCTGTAG...CTTATCGAAGGTTAAATGGACTCTGCTCATAAACCTCTTACTGAGATGCTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp ATTTATGCTAGAAGAAGGTTCCAGGCAATGCACGAGGCTGAGGTTCAGAGAAGACAACATGAAGCTGGCTaGATTCCACGAGGTACATGC +
Preference number: 4 (lower is better)
Translates to: IYARRRFQAMHEAEVQRRQHEAG*IPRGTC
Trigger: GCATGTACCTCGTGGAATTCAGCCAGCTTCATGTTG...TCTTCTCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTCTTCTAGCATAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTTGCCAATACCTTCATTaGTTTGCAGTCTTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: EEWRWQTPAVLHCPVHLSCQYLH*FAVLGS
Trigger: TGACCCCAAGACTGCAAATCAATGAAGGTATTGGCA...AGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355446.9
ENST00000440394.7
CDS-3UTR TCA 90 bp TGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCTGCCAATACCTTCATTaGTTTGCAGTCTTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: WRHPLSLLNSKSIPGFILCQYLH*FAVLGS
Trigger: TGACCCCAAGACTGCAAATCAATGAAGGTATTGGCA...GAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTGCCTAATTATTTATaGCTGCTGTTGTCTACGCTA +
Preference number: 4 (lower is better)
Translates to: WFHSHVRGQEVRGSSAPWLPNYL*LLLSTL
Trigger: TAGCGTAGACAACAGCAGTCATAAATAATTAGGCAG...CCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCTCTTATCAGGAGATGTaGGTGTCTGCTGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: ERFDPLSTLDIKKVSVETSYQEM*VSAGFW
Trigger: CCAGAACCCAGCAGACACTCACATCTCCTGATAAGA...GGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CTAACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGGGGGAGCTGGAAATCTaGCCATGTCAGTTAATGGGA +
Preference number: 4 (lower is better)
Translates to: LTPQYDNVNSLKQERLVEGELEI*PCQLMG
Trigger: TCCCATTAACTGACATGGTCAGATTTCCAGCTCCCC...CTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCTAGTGTGATGGGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACGCCCATATGAAACCATaGCCACTAGGAGAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: PSVMGVGHLVKCWFNDLDAHMKP*PLGEGH
Trigger: ATGCCCCTCTCCTAGTGGTCATGGTTTCATATGGGC...GTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCCCATCACACTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCTAGTGTGATGGGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACGTGCCCTCTTTATGGTaGCATTGGTTTGGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PSVMGVGHLVKCWFNDLDVPSLW*HWFGVQ
Trigger: CTGCACCCCAAACCAATGTCACCATAAAGAGGGCAC...GTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCCCATCACACTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AAGGCTGTTATCACACCGCAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTGTGCCCTCTTTATGGTaGCATTGGTTTGGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: KAVITPQFFTLWWIKRDAVPSLW*HWFGVQ
Trigger: CTGCACCCCAAACCAATGTCACCATAAAGAGGGCAC...AGCATCTCGCTTTATCCACCATAACGTAAAGAACTGCGGTGTGATAACAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGATTCTCCTGCCTCCTaGGTAGCTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: SSERFDPLSTLDIKKVSVDSPAS*VAGITG
Trigger: GCCTGTAATCCCAGCTACTCAGGAGGCAGGAGAATC...TACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGTTGCCTCACAACCCTaGCCCTCAATAGCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFVASQP*PSIAEG
Trigger: TCCCTCCGCTATTGAGGGTCAGGGTTGTGAGGCAAC...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACATCCTTTTGGGGTGACACATaGTGGTTGCCTCACAACCCT +
Preference number: 4 (lower is better)
Translates to: FDPLSTLDIKKVSVETTSFWGDT*WLPHNP
Trigger: AGGGTTGTGAGGCAACCATCATGTGTCACCCCAAAA...GGATGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTTTTTGGGGTGACACATaGTGGTTGCCTCACAACCCT +
Preference number: 4 (lower is better)
Translates to: RYVSQNPLHLSLTEKWPFFWGDT*WLPHNP
Trigger: AGGGTTGTGAGGCAACCATCATGTGTCACCCCAAAA...AAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCT
48% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTATTTATATTTTGGGGTaGCACATGATGGTTGCCTCA +
Preference number: 4 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTIYILG*HMMVAS
Trigger: TGAGGCAACCATCATGTGTCACCCCAAAATATAAAT...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATCATTACTGGTATTTGCTaGCACAGGGTCCGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: KAPIVILEHSALWSIGGIITGIC*HRVRWA
Trigger: AGCCCAGCGGACCCTGTGTCAGCAAATACCAGTAAT...GATGCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GTGGAGAACACCTCACACCATCTTCTTGTTAACTGGCCGAGGAACAGAGTGAGGGGCTGCCCCATAGCTTaGATTCCTTTATTAACAAGA +
Preference number: 4 (lower is better)
Translates to: VENTSHHLLVNWPRNRVRGCPIA*IPLLTR
Trigger: TCTTGTTAATAAAGGAATTCAAGCTATGGGGCAGCC...CCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGGTGTTCTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTACAACTGCGAGGCTCTaGGCCCCAGATTCTCGTTCC +
Preference number: 4 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFTTARL*APDSRS
Trigger: GGAACGAGAATCTGGGGCTCAGAGCCTCGCAGTTGT...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGTCTACCCAGAGGTCCTaGACATGTATAGGAAAATCC +
Preference number: 4 (lower is better)
Translates to: EMLTLLPFSAGSFLHGLRSTQRS*TCIGKS
Trigger: GGATTTTCCTATACATGTTCAGGACCTCTGGGTAGA...CCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTAACACTCCTGCCTTTCAGTGGGGTCACAAACTGTaGAACCTCTACCCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: QFFTLWWIKRDANTPAFQWGHKL*NLYPEV
Trigger: GACCTCTGGGTAGAGGTTTCACAGTTTGTGACCCCA...CTGAAAGGCAGGAGTGTTAGCATCTCGCTTTATCCACCATAACGTAAAGAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGGAAGCCAGAAGGAACTaGCATGGAGGACAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVEARRN*HGGQSV
Trigger: AACAGACTGTCCTCCATGTCAGTTCCTTCTGGCTTC...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCTCTGAACAAAATGGCTaGACTAAGCCTCTGATTGGC +
Preference number: 4 (lower is better)
Translates to: YLLKNGVGKLLQFCIVPFSEQNG*TKPLIG
Trigger: GCCAATCAGAGGCTTAGTTCAGCCATTTTGTTCAGA...GAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTCTGAACAAAATGGCTaGACTAAGCCTCTGATTGGC +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSSEQNG*TKPLIG
Trigger: GCCAATCAGAGGCTTAGTTCAGCCATTTTGTTCAGA...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGAAAGGGTTTTCCCACTaGCACCTCCAACACTGCTTC +
Preference number: 4 (lower is better)
Translates to: DGRCRNGAGITLLQVSKLKGFSH*HLQHCF
Trigger: GAAGCAGTGTTGGAGGTGGCAGTGGGAAAACCCTTT...CAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp GCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGAGGTACAGTGGATaGCATACTCACAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: AVLQRDSTLYLPWTSRRLVRYSG*HTHRRE
Trigger: CTCCCTCCTGTGAGTATGGCATCCACTGTACCTCAC...TAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp CTAACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGGCCTGGATTGTCATCTaGATGTGCTGGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LTPQYDNVNSLKQERLVEAWIVI*MCWFSS
Trigger: GGAGGAAAACCAGCACATGCAGATGACAATCCAGGC...CTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGGCCTGGATTGTCATCTaGATGTGCTGGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVAWIVI*MCWFSS
Trigger: GGAGGAAAACCAGCACATGCAGATGACAATCCAGGC...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp AGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTGTTCGCCAGTCCTGCTaGTACTATCCTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: RYVSQNPLHLSLTEKWPFVRQSC*YYPAET
Trigger: TGTTTCAGCAGGATAGTAGCAGCAGGACTGGCGAAC...AAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGTTCGCCAGTCCTGCTaGTACTATCCTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: DGRCRNGAGITLLQVSKLVRQSC*YYPAET
Trigger: TGTTTCAGCAGGATAGTAGCAGCAGGACTGGCGAAC...CAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCGTTCGCCAGTCCTGCTaGTACTATCCTGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGVRQSC*YYPAET
Trigger: TGTTTCAGCAGGATAGTAGCAGCAGGACTGGCGAAC...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGAAGGTTCGCCAGTCCTaGTGCTACTATCCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVKVRQS*CYYPAE
Trigger: TTCAGCAGGATAGTAGCAGCAGGACTGGCGAACCTT...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp TTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACATCCAAGGTTCGCCAGTCCTaGTGCTACTATCCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: FDPLSTLDIKKVSVETTSKVRQS*CYYPAE
Trigger: TTCAGCAGGATAGTAGCAGCAGGACTGGCGAACCTT...GGATGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp GCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTACTCCTCTGTCAGCTCTaGTACACAAGGTTCGCCAGT +
Preference number: 4 (lower is better)
Translates to: AVLQRDSTLYLPWTSRRLLLCQL*YTRFAS
Trigger: ACTGGCGAACCTTGTGTAGCAGAGCTGACAGAGGAG...TAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTGGCAGAAAGTCCTTTaGTCTGCAACATTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLWQKVL*SATFPE
Trigger: TTCTGGAAATGTTGCAGAGCAAAGGACTTTCTGCCA...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp AAGGCTGTTATCACACCGCAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTGTGCATCTCTGCCTCTaGCAGTCGTCTTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: KAVITPQFFTLWWIKRDAVHLCL*QSSCSL
Trigger: GAGAGAACAAGACGACTGGCAGAGGCAGAGATGCAC...AGCATCTCGCTTTATCCACCATAACGTAAAGAACTGCGGTGTGATAACAGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACATCCATGAACGTGCATCTCTaGCTCTGCCAGTCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: FDPLSTLDIKKVSVETTSMNVHL*LCQSSC
Trigger: ACAAGACGACTGGCAGAGGCAGAGATGCACGTTCAT...GGATGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp CGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCATTCTCAAACCTTCGATaGATCTCCTCTCTCAACATA +
Preference number: 4 (lower is better)
Translates to: RAPVPRSSLFLAPGLTTSFSNLR*ISSLNI
Trigger: TATGTTGAGAGAGGAGATGCATCGAAGGTTTGAGAA...TGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCGTTTCTAGCTTTGTCTaGAGGGCGAGTAGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: AERQSKMADVETVLESHFVSSFV*RASSSV
Trigger: CACAGAACTACTCGCCCTGCAGACAAAGCTAGAAAC...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp AGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATTTCAACACTTCAATGTaGTGTTTACTATCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: RQGWMKTQTLGERVLPSHFNTSM*CLLSEN
Trigger: GTTCTCAGATAGTAAACAGCACATTGAAGTGTTGAA...ATGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTTTCCTCTCACAGGGAGAGGGATTGTTTCACAGCAGGGAGTAGGGGGAGCTGGTTCAACACTTCAATGTaGTGTTTACTATCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: VSSHRERDCFTAGSRGSWFNTSM*CLLSEN
Trigger: GTTCTCAGATAGTAAACAGCACATTGAAGTGTTGAA...CCAGCTCCCCCTACTCCCTGCTGTGAAACAATCCCTCTCCCTGTGAGAGGAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCTTCAACACTTCAATGTaGTGTTTACTATCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFFNTSM*CLLSEN
Trigger: GTTCTCAGATAGTAAACAGCACATTGAAGTGTTGAA...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp AAAGCTGCAGGCGGGGACAACAGGGTCTCATATGTCAACTTTGTATGTTCTCTTTTGGTGGTGTCAGCCTaGAAGGATTTGACCCGTTCT +
Preference number: 4 (lower is better)
Translates to: KAAGGDNRVSYVNFVCSLLVVSA*KDLTRS
Trigger: AGAACGGGTCAAATCCTTGCAGGCTGACACCACCAA...AAGAGAACATACAAAGTTGACATATGAGACCCTGTTGTCCCCGCCTGCAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCTTGGTGGTGTCAGCCTaGAAGGATTTGACCCGTTCT +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGLVVSA*KDLTRS
Trigger: AGAACGGGTCAAATCCTTGCAGGCTGACACCACCAA...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGGGCTCTGGCTTCCAATaGTGCCTCATGTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVGSGFQ*CLMCLF
Trigger: AAAAAGGCACATGAGGCAGCATTGGAAGCCAGAGCC...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp AAAGCTGCAGGCGGGGACAACAGGGTCTCATATGTCAACTTTGTATGTTCTCTTGGCTCTGGCTTCCAATaGTGCCTCATGTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: KAAGGDNRVSYVNFVCSLGSGFQ*CLMCLF
Trigger: AAAAAGGCACATGAGGCAGCATTGGAAGCCAGAGCC...AAGAGAACATACAAAGTTGACATATGAGACCCTGTTGTCCCCGCCTGCAGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCGGCTCTGGCTTCCAATaGTGCCTCATGTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGGSGFQ*CLMCLF
Trigger: AAAAAGGCACATGAGGCAGCATTGGAAGCCAGAGCC...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCGAGTCGATCAACTTCTaGCTGGGCCTTGCTAGATTC +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGESINF*LGLARF
Trigger: GAATCTAGCAAGGCCCAGGCAGAAGTTGATCGACTC...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp GATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGAGTCGATCAACTTCTaGCTGGGCCTTGCTAGATTC +
Preference number: 4 (lower is better)
Translates to: DGRCRNGAGITLLQVSKLESINF*LGLARF
Trigger: GAATCTAGCAAGGCCCAGGCAGAAGTTGATCGACTC...CAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp GAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCGAGTCGATCAACTTCTaGCTGGGCCTTGCTAGATTC +
Preference number: 4 (lower is better)
Translates to: ERFDPLSTLDIKKVSVETESINF*LGLARF
Trigger: GAATCTAGCAAGGCCCAGGCAGAAGTTGATCGACTC...GGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp CTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTATAGGAAGCTGGTGGAGTCTTGTGCTTCAGATTTaGTACCTTCTTATTCTGGTC +
Preference number: 4 (lower is better)
Translates to: LILPSRLVIVQVIGSWWSLVLQI*YLLILV
Trigger: GACCAGAATAAGAAGGTAGCAAATCTGAAGCACAAG...ACTCCACCAGCTTCCTATAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTCTTGTGCTTCAGATTTaGTACCTTCTTATTCTGGTC +
Preference number: 4 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTLVLQI*YLLILV
Trigger: GACCAGAATAAGAAGGTAGCAAATCTGAAGCACAAG...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGATGGATTCTAGTTCCTaGTTTACCTTCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: DNGLLSAEEWRWQTPAVLMDSSS*FTFSMA
Trigger: GGCCATGGAGAAGGTAAAGCAGGAACTAGAATCCAT...CAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp CGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGATGGATTCTAGTTCCTaGTTTACCTTCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: RDANTPAFQCWELSTWFTMDSSS*FTFSMA
Trigger: GGCCATGGAGAAGGTAAAGCAGGAACTAGAATCCAT...CGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTATGGATTCTAGTTCCTaGTTTACCTTCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVMDSSS*FTFSMA
Trigger: GGCCATGGAGAAGGTAAAGCAGGAACTAGAATCCAT...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCTTTTCTGCCAGAGACTaGTGGGTGGAGGACAGCTTT +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGFSARD*WVEDSF
Trigger: AAAGCTGTCCTCCACCCAGCAGTCTCTGGCAGAAAA...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp GAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCGTGAGTTTCCTTTTCTaGCAGAGACTGCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: ERFDPLSTLDIKKVSVETVSFLF*QRLLGG
Trigger: TCCACCCAGCAGTCTCTGGCAGAAAAGGAAACTCAC...GGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp GACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGGTGTTTCCTTCTCTCTaGCCGAAGATTAGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: DNGLLSAEEWRWQTPAVLVFPSL*PKISQV
Trigger: CACTTGACTAATCTTCGGGCAGAGAGAAGGAAACAC...CAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp TGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCGTGTTTCCTTCTCTCTaGCCGAAGATTAGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: WRHPLSLLNSKSIPGFILVFPSL*PKISQV
Trigger: CACTTGACTAATCTTCGGGCAGAGAGAAGGAAACAC...GAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp GAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTAGTGTTTCCTTCTCTCTaGCCGAAGATTAGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: EWRWQTPAVLHCPVHLSLVFPSL*PKISQV
Trigger: CACTTGACTAATCTTCGGGCAGAGAGAAGGAAACAC...TAGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACGTCTGCTGCTTAAGCTaGTGTACCAGACGATCCTTC +
Preference number: 4 (lower is better)
Translates to: TPQYDNVNSLKQERLVENVCCLS*CTRRSF
Trigger: GAAGGATCGTCTGGTACAGCAGCTTAAGCAGCAGAC...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp GGTGGCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGCGATTTTGCGTCTGCTaGTTAAGCTGCTGTACCAGA +
Preference number: 4 (lower is better)
Translates to: GGSSSERFDPLSTLDIKKRFCVC*LSCCTR
Trigger: TCTGGTACAGCAGCTTAAGCAGCAGACGCAAAATCG...CTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp AAGGCTGTTATCACACCGCAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTGCGTTGGCAAACTCCTaGAGTTCTGCATTGTCCCGT +
Preference number: 4 (lower is better)
Translates to: KAVITPQFFTLWWIKRDAALANS*SSALSR
Trigger: ACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGC...AGCATCTCGCTTTATCCACCATAACGTAAAGAACTGCGGTGTGATAACAGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGTTTGTAGTGTTTGGTaGCAAGAAGGTTCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: DGRCRNGAGITLLQVSKLVCSVW*QEGSGH
Trigger: GTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC...CAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp ATTTATGCTAGAAGAAGGTTCCAGGCAATGCACGAGGCTGAGGTTCAGAGAAGAGTTTGTAGTGTTTGGTaGCAAGAAGGTTCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: IYARRRFQAMHEAEVQRRVCSVW*QEGSGH
Trigger: GTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC...TCTTCTCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTCTTCTAGCATAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AAAGCTGCAGGCGGGGACAACAGGGTCTCATATGTCAACTTTGTATGTTCTCTTTGTTGCCCTGGCTGGTaGTCTTTCAACCTCACATGT +
Preference number: 4 (lower is better)
Translates to: KAAGGDNRVSYVNFVCSLCCPGW*SFNLTC
Trigger: ACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACA...AAGAGAACATACAAAGTTGACATATGAGACCCTGTTGTCCCCGCCTGCAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACTGTTGCCCTGGCTGGTaGTCTTTCAACCTCACATGT +
Preference number: 4 (lower is better)
Translates to: TPQYDNVNSLKQERLVENCCPGW*SFNLTC
Trigger: ACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACA...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCATTCCACGAGGTACATaGAGATGTCAGGAAATGGCC +
Preference number: 4 (lower is better)
Translates to: AERQSKMADVETVLESHFIPRGT*RCQEMA
Trigger: GGCCATTTCCTGACATCTGCATGTACCTCGTGGAAT...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTATTACTATCTAACCCCTaGACCCCTCTCTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVLLSNP*TPLWPA
Trigger: GGCTGGCCAGAGAGGGGTGCAGGGGTTAGATAGTAA...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTACTCCTGCCTTTCAGTaGTGGGAGCTTTCTACATGG +
Preference number: 4 (lower is better)
Translates to: RYVSQNPLHLSLTEKWPFTPAFQ*WELSTW
Trigger: CCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGT...AAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTACATGCAGATGTCAGGAAATGGCCACCCACAAGTAGATACTCAGAGCCCCTCTCAGTAGCAGTTGTATaGCCATATGAAACCATGACC +
Preference number: 4 (lower is better)
Translates to: VHADVRKWPPTSRYSEPLSVAVV*PYETMT
Trigger: GGTCATGGTTTCATATGGGCATACAACTGCTACTGA...GAGGGGCTCTGAGTATCTACTTGTGGGTGGCCATTTCCTGACATCTGCATGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTGGTTTGGGGTGCAGATCTTACCCACTCTTCTTCGTaGCCTCTTTATGGTGACATT +
Preference number: 4 (lower is better)
Translates to: PTLLRALFMVTLVWGADLTHSSS*PLYGDI
Trigger: AATGTCACCATAAAGAGGGCACGAAGAAGAGTGGGT...AAGATCTGCACCCCAAACCAATGTCACCATAAAGAGGGCACGAAGAAGAGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCACCCACTCTTCTTCGTaGCCTCTTTATGGTGACATT +
Preference number: 4 (lower is better)
Translates to: WRHPLSLLNSKSIPGFILTHSSS*PLYGDI
Trigger: AATGTCACCATAAAGAGGGCACGAAGAAGAGTGGGT...GAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AAGGCTGTTATCACACCGCAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTCTCAAGCGATTCTCCTaGCTCCTGAGTAGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: KAVITPQFFTLWWIKRDALKRFS*LLSSWD
Trigger: ATCCCAGCTACTCAGGAGGCAGGAGAATCGCTTGAG...AGCATCTCGCTTTATCCACCATAACGTAAAGAACTGCGGTGTGATAACAGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTAATTCTTCCCTAATTTaGATGGGGGAAACTCCAGAT +
Preference number: 4 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTNSSLI*MGETPD
Trigger: ATCTGGAGTTTCCCCCATGCAAATTAGGGAAGAATT...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTGGAGAACACCTCACACCATCTTCTTGTTAACTGGCCGAGGAACAGAGTGAGGCAGACACAATGTAACTaGCCCAATTCTCTGAATCAC +
Preference number: 4 (lower is better)
Translates to: VENTSHHLLVNWPRNRVRQTQCN*PNSLNH
Trigger: GTGATTCAGAGAATTGGGGCAGTTACATTGTGTCTG...CCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGGTGTTCTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACGCTGCAGTAGATGGATaGAATACTGGCGTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LSTWFTGTAMNRIEVTDHAAVDG*NTGVVW
Trigger: CCACACCACGCCAGTATTGCATCCATCTACTGCAGC...GTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTCTACAAGGGGGCAGGTaGTCCTCAGCTCCTCCACTA +
Preference number: 4 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGLQGGR*SSAPPL
Trigger: TAGTGGAGGAGCTGAGGAGCACCTGCCCCCTTGTAG...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGACTCTACAGACTTTAAATTCTCACCACCATGGAGGCTaGTACTGTTACCAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: VGSSWTDGAVLTLQTLNSHHHGG*YCYQKE
Trigger: TTCCTTTTGGTAACAGTAGCAGCCTCCATGGTGGTG...AGAATTTAAAGTCTGTAGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTTCCATGGCTTTGGGATaGAACGGATTCTGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFSMALG*NGFCPR
Trigger: CCGGGGGCAGAATCCGTTGCATCCCAAAGCCATGGA...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355446.9
CDS-3UTR GCA 90 bp GCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTAACTCATTCTGGTCTTTCACTTaGCTTGAGGTGAGACTTTCC +
Preference number: 4 (lower is better)
Translates to: ALANSCSSALSRSPFSNSFWSFT*LEVRLS
Trigger: GGAAAGTCTCACCTCAAGGCAAGTGAAAGACCAGAA...TGAGTTAGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGGGGCACTTCCATACATaGTTGCAAGGTCAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVGHFHT*LQGQER
Trigger: CCTTTCCTGACCTTGCAACCATGTATGGAAGTGCCC...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACGGGCACTTCCATACATaGTTGCAAGGTCAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: TPQYDNVNSLKQERLVENGHFHT*LQGQER
Trigger: CCTTTCCTGACCTTGCAACCATGTATGGAAGTGCCC...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TTCCTTGCTGTTCACAGAGACCAGACAGATGATATCGGTCCCGGAAATGCTTCTTTCCTTCTTCAGCTCTaGGCTCCAGAAGGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: FLAVHRDQTDDIGPGNASFLLQL*APEGLD
Trigger: ATCAAGACCTTCTGGAGCCCAGAGCTGAAGAAGGAA...AGAAGCATTTCCGGGACCGATATCATCTGTCTGGTCTCTGTGAACAGCAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTGTCATCTGCATGTGCTaGTTTTCCTCCTGTACAACT +
Preference number: 4 (lower is better)
Translates to: RMALANSCSSALSRSPFSVICMC*FSSCTT
Trigger: AGTTGTACAGGAGGAAAACCAGCACATGCAGATGAC...AGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
CDS-3UTR CCA 90 bp GGTGGCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGATCCGCAATTCATCCTaGAGAGCCTGGATTGTCATC +
Preference number: 4 (lower is better)
Translates to: GGSSSERFDPLSTLDIKKIRNSS*RAWIVI
Trigger: GATGACAATCCAGGCTCTCCAGGATGAATTGCGGAT...CTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGCCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp GCTACGTCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCCGTCTTGTTCTCTCATaGTCTTCCTCGGTAGCCTTG +
Preference number: 4 (lower is better)
Translates to: ATSLTMPIPSLICSLGVSRLVLS*SSSVAL
Trigger: CAAGGCTACCGAGGAAGACCATGAGAGAACAAGACG...GCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGACGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGCGTCTTGTTCTCTCATaGTCTTCCTCGGTAGCCTTG +
Preference number: 4 (lower is better)
Translates to: RQSKMADVETVLESHFFKRLVLS*SSSVAL
Trigger: CAAGGCTACCGAGGAAGACCATGAGAGAACAAGACG...CTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp CCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACGCAGAGCTTTTGTTTTaGCAGAATCAGGAGCATTCT +
Preference number: 4 (lower is better)
Translates to: PAFQCWELSTWFTGTAMNAELLF*QNQEHS
Trigger: AGAATGCTCCTGATTCTGCCAAAACAAAAGCTCTGC...GTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTGCAGAGCTTTTGTTTTaGCAGAATCAGGAGCATTCT +
Preference number: 4 (lower is better)
Translates to: GPLEASSQPVELQVHSWFAELLF*QNQEHS
Trigger: AGAATGCTCCTGATTCTGCCAAAACAAAAGCTCTGC...AAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp TTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTCACTCATCTCTGGACTaGCTCTGGCTTCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: FQCWELSTWFTGTAMNRIHSSLD*LWLPML
Trigger: CAGCATTGGAAGCCAGAGCCAGTCCAGAGATGAGTG...AATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp ATAAAGCGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGCGATCAACTTCTGCCTaGGCCTTGCTAGATTCATCT +
Preference number: 4 (lower is better)
Translates to: IKRDANTPAFQCWELSTWRSTSA*ALLDSS
Trigger: AGATGAATCTAGCAAGGCCCAGGCAGAAGTTGATCG...CCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCGCTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCCGATCAACTTCTGCCTaGGCCTTGCTAGATTCATCT +
Preference number: 4 (lower is better)
Translates to: AERQSKMADVETVLESHFRSTSA*ALLDSS
Trigger: AGATGAATCTAGCAAGGCCCAGGCAGAAGTTGATCG...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTTTTCAGCATTGGTCCTaGCTGATTCCTCTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVFQHWS*LIPLVL
Trigger: TAGCACAAGAGGAATCAGCCAGGACCAATGCTGAAA...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CTAGGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTTTTCAGCATTGGTCCTaGCTGATTCCTCTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: LGCRDNGLLSAEEWRWQTFQHWS*LIPLVL
Trigger: TAGCACAAGAGGAATCAGCCAGGACCAATGCTGAAA...AGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355446.9
ENST00000440394.7
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCCTGTTTTTCAGCATTaGTCCTGGCTGATTCCTCTT +
Preference number: 4 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVPVFQH*SWLIPL
Trigger: AAGAGGAATCAGCCAGGACCAATGCTGAAAAACAGG...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CGGGTCATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTAACAGCTTTGCTTTCATaGATTCTAGTTCCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: RVIFCSSFSQAAWSSSKLTALLS*ILVPAL
Trigger: TAAAGCAGGAACTAGAATCCATGAAAGCAAAGCTGT...TAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp AGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGGCAGCCACTTCCTCTTaGGTCTTCTTCTTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: RQSKMADVETVLESHFFKAATSS*VFFLED
Trigger: GTCCTCTAAGAAGAAGACCCAAGAGGAAGTGGCTGC...CTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp GATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGCTGGATGATCTGGTCTaGGGAGGGCTTGTGATTTGT +
Preference number: 4 (lower is better)
Translates to: DGRCRNGAGITLLQVSKLLDDLV*GGLVIC
Trigger: ACAAATCACAAGCCCTCCCCAGACCAGATCATCCAG...CAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp GAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCGTTATAGGAAGCTGGTaGAGTGAGTCCACGGAGGAT +
Preference number: 4 (lower is better)
Translates to: ERFDPLSTLDIKKVSVETVIGSW*SESTED
Trigger: ATCCTCCGTGGACTCACTCCACCAGCTTCCTATAAC...GGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTCAAGTTATAGGAAGCTaGTGGAGTGAGTCCACGGAG +
Preference number: 4 (lower is better)
Translates to: RYVSQNPLHLSLTEKWPFQVIGS*WSESTE
Trigger: CTCCGTGGACTCACTCCACCAGCTTCCTATAACTTG...AAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCCAAGTTATAGGAAGCTaGTGGAGTGAGTCCACGGAG +
Preference number: 4 (lower is better)
Translates to: ERFDPLSTLDIKKVSVETQVIGS*WSESTE
Trigger: CTCCGTGGACTCACTCCACCAGCTTCCTATAACTTG...GGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp AAAGCTGCAGGCGGGGACAACAGGGTCTCATATGTCAACTTTGTATGTTCTCTTGCTGAAGAATGGCGTTaGCAAACTCCTGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: KAAGGDNRVSYVNFVCSLAEEWR*QTPAVL
Trigger: CAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGC...AAGAGAACATACAAAGTTGACATATGAGACCCTGTTGTCCCCGCCTGCAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTGCTGAAGAATGGCGTTaGCAAACTCCTGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: RYVSQNPLHLSLTEKWPFAEEWR*QTPAVL
Trigger: CAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGC...AAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGGCTGAAGAATGGCGTTaGCAAACTCCTGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: RQSKMADVETVLESHFFKAEEWR*QTPAVL
Trigger: CAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGC...CTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp GCTACGTCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCGCTGAAGAATGGCGTTaGCAAACTCCTGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: ATSLTMPIPSLICSLGVSAEEWR*QTPAVL
Trigger: CAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGC...GCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGACGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGGCTGAAGAATGGCGTTaGCAAACTCCTGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVAEEWR*QTPAVL
Trigger: CAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGC...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACACCCTATCTGCTGAAGAATaGCGTTGGCAAACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PQYDNVNSLKQERLVENTLSAEE*RWQTPA
Trigger: TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAG...GGTGTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCCTATCTGCTGAAGAATaGCGTTGGCAAACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: AERQSKMADVETVLESHFLSAEE*RWQTPA
Trigger: TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAG...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTCTTTTCTTGGCTCCTaGGTTGACTACCTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: AERQSKMADVETVLESHFSFLGS*VDYLRL
Trigger: AAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGA...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGGTCACGCTATGTTGCCCTGGCTGGTGCTCTTTCAACCTCACATGTTCTTCAACCCTTTATCTACCCTaGACATCAAGAAGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: RVTLCCPGWCSFNLTCSSTLYLP*TSRRLV
Trigger: CACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGT...TGAAGAACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACATAGCGTGACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp ACACACCTTAAGATCGGGGAGGGGAAGGACATGCTATTTACTGCTTCAACTCCACTGCTGATGACCAGGTaGCAGTTCTTCAGAGAGATT +
Preference number: 4 (lower is better)
Translates to: THLKIGEGKDMLFTASTPLLMTR*QFFREI
Trigger: AATCTCTCTGAAGAACTGCCACCTGGTCATCAGCAG...TGGAGTTGAAGCAGTAAATAGCATGTCCTTCCCCTCCCCGATCTTAAGGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGGTCACGCTATGTTGCCCTGGCTGGTGCTCTTTCAACCTCACATGTTCTTCACTCCAAGTCCATTCCTaGTTTCATTCTCATGTCAGA +
Preference number: 4 (lower is better)
Translates to: RVTLCCPGWCSFNLTCSSLQVHS*FHSHVR
Trigger: TCTGACATGAGAATGAAACCAGGAATGGACTTGGAG...TGAAGAACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACATAGCGTGACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp AAGGCTGTTATCACACCGCAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTGAACACTCAGCTCTCTaGTCCATTGGAGGCATCCTC +
Preference number: 4 (lower is better)
Translates to: KAVITPQFFTLWWIKRDAEHSAL*SIGGIL
Trigger: GAGGATGCCTCCAATGGACCAGAGAGCTGAGTGTTC...AGCATCTCGCTTTATCCACCATAACGTAAAGAACTGCGGTGTGATAACAGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACAGAACACTCAGCTCTCTaGTCCATTGGAGGCATCCTC +
Preference number: 4 (lower is better)
Translates to: RFDPLSTLDIKKVSVETTEHSAL*SIGGIL
Trigger: GAGGATGCCTCCAATGGACCAGAGAGCTGAGTGTTC...TGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp TTCCTTGCTGTTCACAGAGACCAGACAGATGATATCGGTCCCGGAAATGCTTCTCATCTTCTTGTTAACTaGCCGAGGAACAGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: FLAVHRDQTDDIGPGNASHLLVN*PRNRVR
Trigger: CCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATG...AGAAGCATTTCCGGGACCGATATCATCTGTCTGGTCTCTGTGAACAGCAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CTTGGGGTCAGCTTTCTGATTTGCAACATGAAGCTGGCTGAATTCCACGAGGTAGCAGATGTCAGGAAATaGCCACCCACAAGTAGATAC +
Preference number: 4 (lower is better)
Translates to: LGVSFLICNMKLAEFHEVADVRK*PPTSRY
Trigger: GTATCTACTTGTGGGTGGCCATTTCCTGACATCTGC...TACCTCGTGGAATTCAGCCAGCTTCATGTTGCAAATCAGAAAGCTGACCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACACCGCAGATGTCAGGAAATaGCCACCCACAAGTAGATAC +
Preference number: 4 (lower is better)
Translates to: PQYDNVNSLKQERLVENTADVRK*PPTSRY
Trigger: GTATCTACTTGTGGGTGGCCATTTCCTGACATCTGC...GGTGTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TTCCTTGCTGTTCACAGAGACCAGACAGATGATATCGGTCCCGGAAATGCTTCTGCAGATGTCAGGAAATaGCCACCCACAAGTAGATAC +
Preference number: 4 (lower is better)
Translates to: FLAVHRDQTDDIGPGNASADVRK*PPTSRY
Trigger: GTATCTACTTGTGGGTGGCCATTTCCTGACATCTGC...AGAAGCATTTCCGGGACCGATATCATCTGTCTGGTCTCTGTGAACAGCAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp ATAAAGCGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGGCAGATGTCAGGAAATaGCCACCCACAAGTAGATAC +
Preference number: 4 (lower is better)
Translates to: IKRDANTPAFQCWELSTWADVRK*PPTSRY
Trigger: GTATCTACTTGTGGGTGGCCATTTCCTGACATCTGC...CCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCGCTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAACAGTCAAGGGCTGGTaGTGGGAAGTTCCTGGACTG +
Preference number: 4 (lower is better)
Translates to: SSERFDPLSTLDIKKVSVTVKGW*WEVPGL
Trigger: CAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGT...TACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTTCTTTACGTTATGGTaGATAAAGCGAGATGCTAAC +
Preference number: 4 (lower is better)
Translates to: SFSCQRTGGERLLCSMALFFTLW*IKRDAN
Trigger: GTTAGCATCTCGCTTTATCCACCATAACGTAAAGAA...GAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTGAAAGTCCACGTGGGTaGGATCTGGGCCACCTGCTT +
Preference number: 4 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGESPRG*DLGHLL
Trigger: AAGCAGGTGGCCCAGATCCCACCCACGTGGACTTTC...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACTGGGAGTGGGACATTTaGTTAAGTGTTGGTTCAATG +
Preference number: 4 (lower is better)
Translates to: PAFQCWELSTWFTGTAMNWEWDI*LSVGSM
Trigger: CATTGAACCAACACTTAACCAAATGTCCCACTCCCA...GTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCTAGTGTGATGGGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACGCCGATGGAGGGGTTTaGGGAAAATTAAGGGCAACC +
Preference number: 4 (lower is better)
Translates to: PSVMGVGHLVKCWFNDLDADGGV*GKLRAT
Trigger: GGTTGCCCTTAATTTTCCCCAAACCCCTCCATCGGC...GTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCCCATCACACTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGATGAGAAGCTCACACTaGGCTTCTTCAGTTACAAAA +
Preference number: 4 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLMRSSH*ASSVTK
Trigger: TTTTGTAACTGAAGAAGCCCAGTGTGAGCTTCTCAT...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGAAGCATCTCAGTAAGAGGTTTATGAGCAGAGTCCATTTAACCTTCGATAAGAGGCGTGAGCCACTGTaGCCGGCCCCATCCATATTT +
Preference number: 4 (lower is better)
Translates to: RKHLSKRFMSRVHLTFDKRREPL*PAPSIF
Trigger: AAATATGGATGGGGCCGGCCACAGTGGCTCACGCCT...CTTATCGAAGGTTAAATGGACTCTGCTCATAAACCTCTTACTGAGATGCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGAAGCATCTCAGTAAGAGGTTTATGAGCAGAGTCCATTTAACCTTCGATAAGCCATCTTGGCCAGGCTaGCCTCGAACTCCTGATCTC +
Preference number: 4 (lower is better)
Translates to: RKHLSKRFMSRVHLTFDKPSWPG*PRTPDL
Trigger: GAGATCAGGAGTTCGAGGCCAGCCTGGCCAAGATGG...CTTATCGAAGGTTAAATGGACTCTGCTCATAAACCTCTTACTGAGATGCTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTGGAGGAACAGGACTCTaGCAGCAAATCCAAATGCCA +
Preference number: 4 (lower is better)
Translates to: RYVSQNPLHLSLTEKWPFGGTGL*QQIQMP
Trigger: TGGCATTTGGATTTGCTGCCAGAGTCCTGTTCCTCC...AAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGCGGTCTTCTCTGCTTaGCTCTTTCCTCAAAGACTC +
Preference number: 4 (lower is better)
Translates to: DGRCRNGAGITLLQVSKLAVFSA*LFPQRL
Trigger: GAGTCTTTGAGGAAAGAGCCAAGCAGAGAAGACCGC...CAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCAGACATTCCTTTGAGTaGTTCACGTCCCCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGRHSFE*FTSPPE
Trigger: CTCAGGAGGGGACGTGAACCACTCAAAGGAATGTCT...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGAAAGAAGAGAGGAGGTaGGATGGGACAAAAACCCGC +
Preference number: 4 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVKEERR*DGTKTR
Trigger: GCGGGTTTTTGTCCCATCCCACCTCCTCTCTTCTTT...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp ATAAAGCGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTGTATAGGAAAATCCTaGCACAACTGCGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: IKRDANTPAFQCWELSTWCIGKS*HNCEAL
Trigger: CAGAGCCTCGCAGTTGTGCCAGGATTTTCCTATACA...CCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCGCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAAGAGATAGCACCAAGTaGGCAGGAGAGGTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SSERFDPLSTLDIKKVSVRDSTK*AGEVLW
Trigger: CCACAGGACCTCTCCTGCCCACTTGGTGCTATCTCT...TACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTCTCACCCGTGCTGGGTaGTCACTGGAAGAGATAGCA +
Preference number: 4 (lower is better)
Translates to: SSSERFDPLSTLDIKKVSLTRAG*SLEEIA
Trigger: TGCTATCTCTTCCAGTGACCACCCAGCACGGGTGAG...ACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTCAGAAGGAACTGACATaGAGGACAGTCTGTTCCACC +
Preference number: 4 (lower is better)
Translates to: RYVSQNPLHLSLTEKWPFQKELT*RTVCST
Trigger: GGTGGAACAGACTGTCCTCCATGTCAGTTCCTTCTG...AAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TTCCTTGCTGTTCACAGAGACCAGACAGATGATATCGGTCCCGGAAATGCTTCTTGTAGCTGCAGTAGATaGATGCAATACTGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: FLAVHRDQTDDIGPGNASCSCSR*MQYWRG
Trigger: ACCACGCCAGTATTGCATCCATCTACTGCAGCTACA...AGAAGCATTTCCGGGACCGATATCATCTGTCTGGTCTCTGTGAACAGCAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTAGTCACAGGCCCCACTaGATATCCTGCAATGCCCGG +
Preference number: 4 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFSHRPH*ISCNAR
Trigger: CCGGGCATTGCAGGATATCCAGTGGGGCCTGTGACT...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTAAGGCAGTTTTTCCATaGCTTTGGGATGCAACGGAT +
Preference number: 4 (lower is better)
Translates to: LSAEEWRWQTPAVLHCPVKAVFP*LWDATD
Trigger: ATCCGTTGCATCCCAAAGCCATGGAAAAACTGCCTT...AACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355446.9
CDS-3UTR CCA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCAGTTCTAAGAGGGGCTaGATGATCGTTCTGAACAAA +
Preference number: 4 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFSSKRG*MIVLNK
Trigger: TTTGTTCAGAACGATCATCCAGCCCCTCTTAGAACT...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTCCAGCTGTCCAATCTTaGAGAAGTATCTTACACCAT +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSPAVQS*RSILHH
Trigger: ATGGTGTAAGATACTTCTTCAAGATTGGACAGCTGG...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp ACACACCTTAAGATCGGGGAGGGGAAGGACATGCTATTTACTGCTTCAACTCCAAAAATGGGAACCTTGTaGGGTGTCTCTATGGCTACA +
Preference number: 4 (lower is better)
Translates to: THLKIGEGKDMLFTASTPKMGTL*GVSMAT
Trigger: TGTAGCCATAGAGACACCTCACAAGGTTCCCATTTT...TGGAGTTGAAGCAGTAAATAGCATGTCCTTCCCCTCCCCGATCTTAAGGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCAGGTCAGGAAAGGTGTaGGCAGAAAATCAACAACAA +
Preference number: 4 (lower is better)
Translates to: VCYLLKNGVGKLLQFCIVRSGKV*AENQQQ
Trigger: TTGTTGTTGATTTTCTGCTCACACCTTTCCTGACCT...GACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTAGGTCAGGAAAGGTGTaGGCAGAAAATCAACAACAA +
Preference number: 4 (lower is better)
Translates to: EEWRWQTPAVLHCPVHLSRSGKV*AENQQQ
Trigger: TTGTTGTTGATTTTCTGCTCACACCTTTCCTGACCT...AGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTGCTTTTAGGTGTTTCTaGACCCACATTTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVAFRCF*THIFMV
Trigger: GACCATGAAAATGTGGGTTCAGAAACACCTAAAAGC...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp TCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGCCACGTTTAGCTTTTAGGTGTTTCTaGACCCACATTTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: SESYKLHPLCPTARRPRLAFRCF*THIFMV
Trigger: GACCATGAAAATGTGGGTTCAGAAACACCTAAAAGC...TAAACGTGGCCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGCTTGATGCTATTCATTaGAGAACTCAATTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLLDAIH*RTQFAL
Trigger: GAGAGCAAATTGAGTTCTTCAATGAATAGCATCAAG...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTCTTGATGCTATTCATTaGAGAACTCAATTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTLDAIH*RTQFAL
Trigger: GAGAGCAAATTGAGTTCTTCAATGAATAGCATCAAG...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCGGCTCCAGAAGGTCTTaGTGCTATTCATTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: AERQSKMADVETVLESHFGSRRS*CYSLKN
Trigger: GTTCTTCAATGAATAGCATCAAGACCTTCTGGAGCC...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp TTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACATCCTTTAGGGTCTGCTTTTaGGTCTCAATACGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: FDPLSTLDIKKVSVETTSFRVCF*VSIRSS
Trigger: GGAGCTGCGTATTGAGACTCAAAAGCAGACCCTAAA...GGATGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTAGGGTCTGCTTTTaGGTCTCAATACGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVFRVCF*VSIRSS
Trigger: GGAGCTGCGTATTGAGACTCAAAAGCAGACCCTAAA...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp GACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGTTCGATTTCAGCATCTaGATTTCCTCTTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: DNGLLSAEEWRWQTPAVLFDFSI*ISSSRS
Trigger: AGACCTGGAAGAGGAAATTCAGATGCTGAAATCGAA...CAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
CDS-3UTR TCA 90 bp GTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCTTCGATTTCAGCATCTaGATTTCCTCTTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: VCYLLKNGVGKLLQFCIVFDFSI*ISSSRS
Trigger: AGACCTGGAAGAGGAAATTCAGATGCTGAAATCGAA...GACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
CDS-3UTR TCA 90 bp GCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTCGATTTCAGCATCTaGATTTCCTCTTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: AGMSHRIHYISPSLRSGLFDFSI*ISSSRS
Trigger: AGACCTGGAAGAGGAAATTCAGATGCTGAAATCGAA...AAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACCATCCAACATGTCCTTaGGGTCATGTATCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: TPQYDNVNSLKQERLVENHPTCP*GHVSLQ
Trigger: CTGGAGAGATACATGACCTCAAGGACATGTTGGATG...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp ATTTATGCTAGAAGAAGGTTCCAGGCAATGCACGAGGCTGAGGTTCAGAGAAGACGCCTTGCAACAGGCTaGCTTTTTCCTTCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: IYARRRFQAMHEAEVQRRRLATG*LFPSSL
Trigger: AAGACTTGAAGGAAAAAGTCAGCCTGTTGCAAGGCG...TCTTCTCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTCTTCTAGCATAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AAAGCTGCAGGCGGGGACAACAGGGTCTCATATGTCAACTTTGTATGTTCTCTTCATCTTTGTACCTGGTaGTCTCTCTCTCCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: KAAGGDNRVSYVNFVCSLHLCTW*SLSPSA
Trigger: AGCACTTGGAGAGAGAGATCACCAGGTACAAAGATG...AAGAGAACATACAAAGTTGACATATGAGACCCTGTTGTCCCCGCCTGCAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTACGAAGATTAGTCAAGTaGGTTTCCTTTTCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: EWRWQTPAVLHCPVHLSLRRLVK*VSFSAR
Trigger: TCTGGCAGAAAAGGAAACTCACTTGACTAATCTTCG...TAGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCTGGAATGGGAGGATTTaGAGTGGTCATCCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGWNGRI*SGHPRS
Trigger: ACTACGAGGATGACCACTTCAAATCCTCCCATTCCA...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp ATGACTGCTGTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATTGATTTTCTCTAACTCATCCTaGAGCTGCCCCCGGGTCATC +
Preference number: 4 (lower is better)
Translates to: MTAVVYATSLTMPIPSLIFSNSS*SCPRVI
Trigger: GATGACCCGGGGGCAGCTTCAGGATGAGTTAGAGAA...AATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAACAGCAGTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTAACACTCCTGCCTTTCAGATCCTCTCAGCCTGTTaGACTCCAAGTCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: QFFTLWWIKRDANTPAFQILSAC*TPSPFL
Trigger: CAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGAT...CTGAAAGGCAGGAGTGTTAGCATCTCGCTTTATCCACCATAACGTAAAGAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGCAAAGCTAGCAGGGTaGGTGAGGGATCACAACTTC +
Preference number: 4 (lower is better)
Translates to: SSSERFDPLSTLDIKKVSAKLAG*VRDHNF
Trigger: GAAGTTGTGATCCCTCACTCACCCTGCTAGCTTTGC...ACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCTAGTGTGATGGGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACCAACATGAAGCTGGCTaGATTCCACGAGGTACATGC +
Preference number: 4 (lower is better)
Translates to: PSVMGVGHLVKCWFNDLDQHEAG*IPRGTC
Trigger: GCATGTACCTCGTGGAATTCAGCCAGCTTCATGTTG...GTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCCCATCACACTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACACAACATGAAGCTGGCTaGATTCCACGAGGTACATGC +
Preference number: 4 (lower is better)
Translates to: RFDPLSTLDIKKVSVETTQHEAG*IPRGTC
Trigger: GCATGTACCTCGTGGAATTCAGCCAGCTTCATGTTG...TGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGGGTCACGCTATGTTGCCCTGGCTGGTGCTCTTTCAACCTCACATGTTCTTCACTGCCTAATTATTTATaGCTGCTGTTGTCTACGCTA +
Preference number: 4 (lower is better)
Translates to: RVTLCCPGWCSFNLTCSSLPNYL*LLLSTL
Trigger: TAGCGTAGACAACAGCAGTCATAAATAATTAGGCAG...TGAAGAACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACATAGCGTGACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATCGGGGAGCTGGAAATCTaGCCATGTCAGTTAATGGGA +
Preference number: 4 (lower is better)
Translates to: KAPIVILEHSALWSIGGIGELEI*PCQLMG
Trigger: TCCCATTAACTGACATGGTCAGATTTCCAGCTCCCC...GATGCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTCATCAATGATTCAATaGGTACCGGGGGTTAGAGGT +
Preference number: 4 (lower is better)
Translates to: AERQSKMADVETVLESHFSSMIQ*VPGVRG
Trigger: ACCTCTAACCCCCGGTACTCATTGAATCATTGATGA...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCTCAATGGACAGAAATTaGGGGGCAAGTCACAATGCC +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGSMDRN*GASHNA
Trigger: GGCATTGTGACTTGCCCCTCAATTTCTGTCCATTGA...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCATTTATATTTTGGGGTaGCACATGATGGTTGCCTCA +
Preference number: 4 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLIYILG*HMMVAS
Trigger: TGAGGCAACCATCATGTGTCACCCCAAAATATAAAT...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTCACTTGCCTTGAGGTaGGACTTTCCAACTCAGCTA +
Preference number: 4 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVSLALR*DFPTQL
Trigger: TAGCTGAGTTGGAAAGTCTCACCTCAAGGCAAGTGA...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000546231.6
ENST00000611180.4
CDS-3UTR TCA 90 bp GCTACGTCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCGCTGAACTAAGCCTCTaGTTGGCTATGCCCATATAC +
Preference number: 4 (lower is better)
Translates to: ATSLTMPIPSLICSLGVSAELSL*LAMPIY
Trigger: GTATATGGGCATAGCCAATCAGAGGCTTAGTTCAGC...GCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGACGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440394.7
CDS-3UTR GCA 90 bp CAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTAACACTCCTGCCTTTCAGAAAGGGTTTTCCCACTaGCACCTCCAACACTGCTTC +
Preference number: 4 (lower is better)
Translates to: QFFTLWWIKRDANTPAFQKGFSH*HLQHCF
Trigger: GAAGCAGTGTTGGAGGTGGCAGTGGGAAAACCCTTT...CTGAAAGGCAGGAGTGTTAGCATCTCGCTTTATCCACCATAACGTAAAGAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTAAAGGGTTTTCCCACTaGCACCTCCAACACTGCTTC +
Preference number: 4 (lower is better)
Translates to: FQCWELSTWFTGTAMNRIKGFSH*HLQHCF
Trigger: GAAGCAGTGTTGGAGGTGGCAGTGGGAAAACCCTTT...AATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGTGAGGTACAGTGGATaGCATACTCACAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SSERFDPLSTLDIKKVSVVRYSG*HTHRRE
Trigger: CTCCCTCCTGTGAGTATGGCATCCACTGTACCTCAC...TACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp AAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATCATGAACGTGCATCTCTaGCTCTGCCAGTCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: KAPIVILEHSALWSIGGIMNVHL*LCQSSC
Trigger: ACAAGACGACTGGCAGAGGCAGAGATGCACGTTCAT...GATGCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp GGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTTTCTCAAACCTTCGATaGATCTCCTCTCTCAACATA +
Preference number: 4 (lower is better)
Translates to: GPLEASSQPVELQVHSWFFSNLR*ISSLNI
Trigger: TATGTTGAGAGAGGAGATGCATCGAAGGTTTGAGAA...AAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp AAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGTTCAACACTTCAATGTaGTGTTTACTATCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: KQGQEDSSRALTTCSRMSFNTSM*CLLSEN
Trigger: GTTCTCAGATAGTAAACAGCACATTGAAGTGTTGAA...CGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
CDS-3UTR GCA 90 bp AGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACATTGGTGGTGTCAGCCTaGAAGGATTTGACCCGTTCT +
Preference number: 4 (lower is better)
Translates to: RFDPLSTLDIKKVSVETTLVVSA*KDLTRS
Trigger: AGAACGGGTCAAATCCTTGCAGGCTGACACCACCAA...TGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp CAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTAACACTCCTGCCTTTCAGTTGGTGGTGTCAGCCTaGAAGGATTTGACCCGTTCT +
Preference number: 4 (lower is better)
Translates to: QFFTLWWIKRDANTPAFQLVVSA*KDLTRS
Trigger: AGAACGGGTCAAATCCTTGCAGGCTGACACCACCAA...CTGAAAGGCAGGAGTGTTAGCATCTCGCTTTATCCACCATAACGTAAAGAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTTCATCTCTGTCCCTCTaGTCCTTTAAGCGTTCAATT +
Preference number: 4 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVSSLSL*SFKRSI
Trigger: AATTGAACGCTTAAAGGAGCAGAGGGACAGAGATGA...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTAACTCATCATCTCTGTCCCTCTaGTCCTTTAAGCGTTCAATT +
Preference number: 4 (lower is better)
Translates to: ALANSCSSALSRSPFSNSSSLSL*SFKRSI
Trigger: AATTGAACGCTTAAAGGAGCAGAGGGACAGAGATGA...TGAGTTAGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp CTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTTCATCTCTGTCCCTCTaGTCCTTTAAGCGTTCAATT +
Preference number: 4 (lower is better)
Translates to: LSAEEWRWQTPAVLHCPVSSLSL*SFKRSI
Trigger: AATTGAACGCTTAAAGGAGCAGAGGGACAGAGATGA...AACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGTCTGAAAGGTCGCCTTaGAACAGGCTGACTTTTTCC +
Preference number: 4 (lower is better)
Translates to: DGRCRNGAGITLLQVSKLSERSP*NRLTFS
Trigger: GGAAAAAGTCAGCCTGTTGCAAGGCGACCTTTCAGA...CAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp GAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTAGCCAGAGAAGAAGCATaGTCTTTCAGATCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: EWRWQTPAVLHCPVHLSLAREEA*SFRSKS
Trigger: ACTTTTGGATCTGAAAGAGCATGCTTCTTCTCTGGC...TAGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp CAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTAACACTCCTGCCTTTCAGGAGTCGATCAACTTCTaGCTGGGCCTTGCTAGATTC +
Preference number: 4 (lower is better)
Translates to: QFFTLWWIKRDANTPAFQESINF*LGLARF
Trigger: GAATCTAGCAAGGCCCAGGCAGAAGTTGATCGACTC...CTGAAAGGCAGGAGTGTTAGCATCTCGCTTTATCCACCATAACGTAAAGAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCTTCTGGTCTTTCACTTaGCTTTCCAACTCAGCTATC +
Preference number: 4 (lower is better)
Translates to: WRHPLSLLNSKSIPGFILFWSFT*LSNSAI
Trigger: GATAGCTGAGTTGGAAAGGCAAGTGAAAGACCAGAA...GAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp GCAGTTGTATGCCCATATGAAACCATGACCACTAGGAGAGGGGCATGGAATGACTTCTGGTCTTTCACTTaGCTTTCCAACTCAGCTATC +
Preference number: 4 (lower is better)
Translates to: AVVCPYETMTTRRGAWNDFWSFT*LSNSAI
Trigger: GATAGCTGAGTTGGAAAGGCAAGTGAAAGACCAGAA...GTCATTCCATGCCCCTCTCCTAGTGGTCATGGTTTCATATGGGCATACAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp ACACACCTTAAGATCGGGGAGGGGAAGGACATGCTATTTACTGCTTCAACTCCACACCATTTCCCGCTCTaGAGTTATCTGTACACTTTC +
Preference number: 4 (lower is better)
Translates to: THLKIGEGKDMLFTASTPHHFPL*SYLYTF
Trigger: GAAAGTGTACAGATAACTGCAGAGCGGGAAATGGTG...TGGAGTTGAAGCAGTAAATAGCATGTCCTTCCCCTCCCCGATCTTAAGGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGACTCTACAGACTTTAAATTCTATGGATTCTAGTTCCTaGTTTACCTTCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: VGSSWTDGAVLTLQTLNSMDSSS*FTFSMA
Trigger: GGCCATGGAGAAGGTAAAGCAGGAACTAGAATCCAT...AGAATTTAAAGTCTGTAGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCATGGATTCTAGTTCCTaGTTTACCTTCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: AERQSKMADVETVLESHFMDSSS*FTFSMA
Trigger: GGCCATGGAGAAGGTAAAGCAGGAACTAGAATCCAT...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCGTGTTTCCTTCTCTCTaGCCGAAGATTAGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: AERQSKMADVETVLESHFVFPSL*PKISQV
Trigger: CACTTGACTAATCTTCGGGCAGAGAGAAGGAAACAC...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp CATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCATGTCAGCCAGAAGAGCTTCTTaGTTCATCTCCAGAACTTCC +
Preference number: 4 (lower is better)
Translates to: HPLSLLNSKSIPGFILMSARRAS*FISRTS
Trigger: GGAAGTTCTGGAGATGAAGCAAGAAGCTCTTCTGGC...TGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp GCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTCTGCTGCTTAAGCTaGTGTACCAGACGATCCTTC +
Preference number: 4 (lower is better)
Translates to: AVLQRDSTLYLPWTSRRLVCCLS*CTRRSF
Trigger: GAAGGATCGTCTGGTACAGCAGCTTAAGCAGCAGAC...TAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp GATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGCGATTTTGCGTCTGCTaGTTAAGCTGCTGTACCAGA +
Preference number: 4 (lower is better)
Translates to: DGRCRNGAGITLLQVSKLRFCVC*LSCCTR
Trigger: TCTGGTACAGCAGCTTAAGCAGCAGACGCAAAATCG...CAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp CTTGGGGTCAGCTTTCTGATTTGCAACATGAAGCTGGCTGAATTCCACGAGGTAAAACTCCTGCAGTTCTaGATTGTCCCGTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: LGVSFLICNMKLAEFHEVKLLQF*IVPFTF
Trigger: AAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTT...TACCTCGTGGAATTCAGCCAGCTTCATGTTGCAAATCAGAAAGCTGACCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGCGTTGGCAAACTCCTaGAGTTCTGCATTGTCCCGT +
Preference number: 4 (lower is better)
Translates to: SSERFDPLSTLDIKKVSVALANS*SSALSR
Trigger: ACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGC...TACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp TCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACAAAGCGTTGGCAAACTCCTaGAGTTCTGCATTGTCCCGT +
Preference number: 4 (lower is better)
Translates to: STWFTGTAMNRIEVTDHKALANS*SSALSR
Trigger: ACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGC...TTTGTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACAGTCGGGACAATGGTCTaGTATCTGCTGAAGAATGGC +
Preference number: 4 (lower is better)
Translates to: RFDPLSTLDIKKVSVETTVGTMV*YLLKNG
Trigger: GCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC...TGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp GCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTCGGGACAATGGTCTaGTATCTGCTGAAGAATGGC +
Preference number: 4 (lower is better)
Translates to: AVLQRDSTLYLPWTSRRLVGTMV*YLLKNG
Trigger: GCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC...TAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp GGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACAGGGCGTTGACCACTTaGTCTAGGATGTCGGGACAA +
Preference number: 4 (lower is better)
Translates to: GVGHLVKCWFNDLDSMRHRALTT*SRMSGQ
Trigger: TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCT...GTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAAGGTTCCAGGCAATaGACGAGGCTGAGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: SSERFDPLSTLDIKKVSVEGSRQ*TRLRFR
Trigger: TCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTC...TACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATTCCACGAGGTACATaGAGATGTCAGGAAATGGCC +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGIPRGT*RCQEMA
Trigger: GGCCATTTCCTGACATCTGCATGTACCTCGTGGAAT...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTATCGGTCCCGGAAATaGTTCTTCTCAGAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: RQSKMADVETVLESHFFKYRSRK*FFSEAV
Trigger: CACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATA...CTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCTTTCTGAAACTGCATCCACTCTaGCCTACAGCACGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: SLTMPIPSLICSLGVSFLKLHPL*PTARRP
Trigger: TGGCCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTT...CAGAAAGCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGCTGAAAGCTACAAACTaGATCCACTCTGCCCTACAG +
Preference number: 4 (lower is better)
Translates to: DGRCRNGAGITLLQVSKLLKATN*IHSALQ
Trigger: CTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAG...CAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GCAGTTGTATGCCCATATGAAACCATGACCACTAGGAGAGGGGCATGGAATGACTCAGTAGCAGTTGTATaGCCATATGAAACCATGACC +
Preference number: 4 (lower is better)
Translates to: AVVCPYETMTTRRGAWNDSVAVV*PYETMT
Trigger: GGTCATGGTTTCATATGGGCATACAACTGCTACTGA...GTCATTCCATGCCCCTCTCCTAGTGGTCATGGTTTCATATGGGCATACAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AAACCCCGTTGGGATCACACCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTGACATTGGTTTGGGGTaGAGATCTTTAGGTGCTAAA +
Preference number: 4 (lower is better)
Translates to: KPRWDHTHSSSCPLYGDIDIGLG*RSLGAK
Trigger: TTTAGCACCTAAAGATCTGCACCCCAAACCAATGTC...AATGTCACCATAAAGAGGGCACGAAGAAGAGTGGGTGTGATCCCAACGGGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACAAACTCAAGCGATTCTCCTaGCTCCTGAGTAGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: STWFTGTAMNRIEVTDHKLKRFS*LLSSWD
Trigger: ATCCCAGCTACTCAGGAGGCAGGAGAATCGCTTGAG...TTTGTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACAAAGGGTGCCTGCTGCATTaGAGTCTCTTCTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: STWFTGTAMNRIEVTDHKGCLLH*SLFSSF
Trigger: GAAGGATGAGAAGAGACTGCAATGCAGCAGGCACCC...TTTGTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGAAGCCCAGGTTACCATaGAGTATTAGGCACACTGAG +
Preference number: 4 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVKPRLP*SIRHTE
Trigger: CTCAGTGTGCCTAATACTGCATGGTAACCTGGGCTT...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp ATGAGACACTCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGTGTGAGGTGTCTCTATaGCTACAAGTTGGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: MRHSESYKLHPLCPTARRCEVSL*LQVGLR
Trigger: CCTTAAACCAACTTGTAGCCATAGAGACACCTCACA...CCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGAGTGTCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTCCTTCTTCAGCTCTaGGCTCCAGAAGGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVFLLQL*APEGLD
Trigger: ATCAAGACCTTCTGGAGCCCAGAGCTGAAGAAGGAA...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATCCGCAATTCATCCTaGAGAGCCTGGATTGTCATC +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGIRNSS*RAWIVI
Trigger: GATGACAATCCAGGCTCTCCAGGATGAATTGCGGAT...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp AGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGAAGAAACAGCTCTTTaGCCTGCCGCTCATGCTCAG +
Preference number: 4 (lower is better)
Translates to: SSSERFDPLSTLDIKKVSEETAL*PAAHAQ
Trigger: CTGAGCATGAGCGGCAGGCCAAAGAGCTGTTTCTTC...ACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp AGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACACGTCTTGTTCTCTCATaGTCTTCCTCGGTAGCCTTG +
Preference number: 4 (lower is better)
Translates to: RFDPLSTLDIKKVSVETTRLVLS*SSSVAL
Trigger: CAAGGCTACCGAGGAAGACCATGAGAGAACAAGACG...TGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTGCAGAGCTTTTGTTTTaGCAGAATCAGGAGCATTCT +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSAELLF*QNQEHS
Trigger: AGAATGCTCCTGATTCTGCCAAAACAAAAGCTCTGC...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp GTGCACGTGCATCCCAGACACCACCATGGAGGCTGCTACTGTTACCAAAAGGAATTACTATCTGAGAACTaGTTTGTGAGTGTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: VHVHPRHHHGGCYCYQKELLSEN*FVSVSS
Trigger: GCTAGAAACACTCACAAACCAGTTCTCAGATAGTAA...TTCCTTTTGGTAACAGTAGCAGCCTCCATGGTGGTGTCTGGGATGCACGTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTACTATCTGAGAACTaGTTTGTGAGTGTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: SGPLEASSQPVELQVHSWLLSEN*FVSVSS
Trigger: GCTAGAAACACTCACAAACCAGTTCTCAGATAGTAA...CCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp TCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCTTTCTGTCGGTCACTCATCTCTaGACTGGCTCTGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: SLTMPIPSLICSLGVSFLSVTHL*TGSGFQ
Trigger: TTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACCGA...CAGAAAGCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CAGACAGATGATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGATTTCAGCATTGGTCCTaGCTGATTCCTCTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: QTDDIGPGNASSQKQCHRFQHWS*LIPLVL
Trigger: TAGCACAAGAGGAATCAGCCAGGACCAATGCTGAAA...TCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATCATCTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp ACACACCTTAAGATCGGGGAGGGGAAGGACATGCTATTTACTGCTTCAACTCCATTTCAGCATTGGTCCTaGCTGATTCCTCTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: THLKIGEGKDMLFTASTPFQHWS*LIPLVL
Trigger: TAGCACAAGAGGAATCAGCCAGGACCAATGCTGAAA...TGGAGTTGAAGCAGTAAATAGCATGTCCTTCCCCTCCCCGATCTTAAGGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CAGACAGATGATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGACCTGTTTTTCAGCATTaGTCCTGGCTGATTCCTCTT +
Preference number: 4 (lower is better)
Translates to: QTDDIGPGNASSQKQCHRPVFQH*SWLIPL
Trigger: AAGAGGAATCAGCCAGGACCAATGCTGAAAAACAGG...TCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATCATCTGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACGCTTTACCTTCTCCATaGCCATCAGTAACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TPQYDNVNSLKQERLVENALPSP*PSVTPP
Trigger: TGGAGGAGTTACTGATGGCCATGGAGAAGGTAAAGC...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACAGCTTTGCTTTCATaGATTCTAGTTCCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTTALLS*ILVPAL
Trigger: TAAAGCAGGAACTAGAATCCATGAAAGCAAAGCTGT...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp TCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTACCAGAGACTGCTGGGTaGAGGACAGCTTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: SSERFDPLSTLDIKKVSVPETAG*RTALLS
Trigger: TGAAAGCAAAGCTGTCCTCCACCCAGCAGTCTCTGG...TACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp GCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGCAGCCACTTCCTCTTaGGTCTTCTTCTTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: AVLQRDSTLYLPWTSRRLAATSS*VFFLED
Trigger: GTCCTCTAAGAAGAAGACCCAAGAGGAAGTGGCTGC...TAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp CCTAGTGTGATGGGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACCTGGATGATCTGGTCTaGGGAGGGCTTGTGATTTGT +
Preference number: 4 (lower is better)
Translates to: PSVMGVGHLVKCWFNDLDLDDLV*GGLVIC
Trigger: ACAAATCACAAGCCCTCCCCAGACCAGATCATCCAG...GTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCCCATCACACTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACTCTGAAAGCTACAGGGGGTCTCGGTCATaGCAGAGGGTTGTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LVKCWFNDLDSMRHSESYRGSRS*QRVVRC
Trigger: ACACCTGACAACCCTCTGCCATGACCGAGACCCCCT...GTAGCTTTCAGAGTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTCTTTTCTTGGCTCCTaGGTTGACTACCTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: RQSKMADVETVLESHFFKSFLGS*VDYLRL
Trigger: AAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGA...CTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCGAAGTTTGTAGTGTTTaGTGCCAAGAAGGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGEVCSV*CQEGSG
Trigger: CCCGGAACCTTCTTGGCACCAAACACTACAAACTTC...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp GAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCGAAGTTTGTAGTGTTTaGTGCCAAGAAGGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: ERFDPLSTLDIKKVSVETEVCSV*CQEGSG
Trigger: CCCGGAACCTTCTTGGCACCAAACACTACAAACTTC...GGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp ATTTATGCTAGAAGAAGGTTCCAGGCAATGCACGAGGCTGAGGTTCAGAGAAGACTGCTGATGACCAGGTaGCAGTTCTTCAGAGAGATT +
Preference number: 4 (lower is better)
Translates to: IYARRRFQAMHEAEVQRRLLMTR*QFFREI
Trigger: AATCTCTCTGAAGAACTGCCACCTGGTCATCAGCAG...TCTTCTCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTCTTCTAGCATAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTCTCCAAGTCCATTCCTaGTTTCATTCTCATGTCAGA +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSLQVHS*FHSHVR
Trigger: TCTGACATGAGAATGAAACCAGGAATGGACTTGGAG...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp TCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAACACTCAGCTCTCTaGTCCATTGGAGGCATCCTC +
Preference number: 4 (lower is better)
Translates to: SSERFDPLSTLDIKKVSVEHSAL*SIGGIL
Trigger: GAGGATGCCTCCAATGGACCAGAGAGCTGAGTGTTC...TACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp AAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATCAACAGGAGAGACTGGTaGAGAACACCTCACACCATC +
Preference number: 4 (lower is better)
Translates to: KAPIVILEHSALWSIGGINRRDW*RTPHTI
Trigger: GATGGTGTGAGGTGTTCTCCACCAGTCTCTCCTGTT...GATGCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp TTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTTCAAACAGGAGAGACTaGTGGAGAACACCTCACACC +
Preference number: 4 (lower is better)
Translates to: FQCWELSTWFTGTAMNRISNRRD*WRTPHT
Trigger: GGTGTGAGGTGTTCTCCACCAGTCTCTCCTGTTTGA...AATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCATTGATTTGCAGTCTTaGGGTCAGCTTTCTGATTTG +
Preference number: 4 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFIDLQS*GQLSDL
Trigger: CAAATCAGAAAGCTGACCCCAAGACTGCAAATCAAT...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp ATGACTGCTGTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATTGATTACAGTCAAGGGCTGGTaGTGGGAAGTTCCTGGACTG +
Preference number: 4 (lower is better)
Translates to: MTAVVYATSLTMPIPSLITVKGW*WEVPGL
Trigger: CAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGT...AATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAACAGCAGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp ATGACTGCTGTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATTGATTCCTCTCTGGCCAGCCTaGCTATCAGGAAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: MTAVVYATSLTMPIPSLIPLWPA*LSGSIS
Trigger: TGAGATGCTTCCTGATAGCCAGGCTGGCCAGAGAGG...AATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAACAGCAGTCAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCTGGGAGCTTTCTACATaGTTTACGGGCACTGCAATG +
Preference number: 4 (lower is better)
Translates to: ERFDPLSTLDIKKVSVETWELST*FTGTAM
Trigger: CATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCA...GGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTGGGAGCTTTCTACATaGTTTACGGGCACTGCAATG +
Preference number: 4 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVWELST*FTGTAM
Trigger: CATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCA...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCTACGTCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCCCTGCCTTTCAGTGCTaGGAGCTTTCTACATGGTTT +
Preference number: 4 (lower is better)
Translates to: ATSLTMPIPSLICSLGVSPAFQC*ELSTWF
Trigger: AAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG...GCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGACGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCATTCTTTACGTTATGGTaGATAAAGCGAGATGCTAAC +
Preference number: 4 (lower is better)
Translates to: RAPVPRSSLFLAPGLTTSFFTLW*IKRDAN
Trigger: GTTAGCATCTCGCTTTATCCACCATAACGTAAAGAA...TGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGGTCACGCTATGTTGCCCTGGCTGGTGCTCTTTCAACCTCACATGTTCTTCACAGTTCTTTACGTTATaGTGGATAAAGCGAGATGCT +
Preference number: 4 (lower is better)
Translates to: RVTLCCPGWCSFNLTCSSQFFTL*WIKRDA
Trigger: AGCATCTCGCTTTATCCACCATAACGTAAAGAACTG...TGAAGAACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACATAGCGTGACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTGGAGAACACCTCACACCATCTTCTTGTTAACTGGCCGAGGAACAGAGTGAGGCAGTTCTTTACGTTATaGTGGATAAAGCGAGATGCT +
Preference number: 4 (lower is better)
Translates to: VENTSHHLLVNWPRNRVRQFFTL*WIKRDA
Trigger: AGCATCTCGCTTTATCCACCATAACGTAAAGAACTG...CCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGGTGTTCTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CTGCCCTACAGCACGAAGGCCACGTTTATTACTGAACTCCTAGCCAGCCTCCAGCATTTGGTTAAGTGTTaGTTCAATGATCTAGACTCA +
Preference number: 4 (lower is better)
Translates to: LPYSTKATFITELLASLQHLVKC*FNDLDS
Trigger: TGAGTCTAGATCATTGAACCAACACTTAACCAAATG...CTGGAGGCTGGCTAGGAGTTCAGTAATAAACGTGGCCTTCGTGCTGTAGGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AAACCCCGTTGGGATCACACCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTTGGGAGTGGGACATTTaGTTAAGTGTTGGTTCAATG +
Preference number: 4 (lower is better)
Translates to: KPRWDHTHSSSCPLYGDIWEWDI*LSVGSM
Trigger: CATTGAACCAACACTTAACCAAATGTCCCACTCCCA...AATGTCACCATAAAGAGGGCACGAAGAAGAGTGGGTGTGATCCCAACGGGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTATAGGAATGAGAAGCTCACACTaGGCTTCTTCAGTTACAAAA +
Preference number: 4 (lower is better)
Translates to: HLLQLILPSRLVIVQVIGMRSSH*ASSVTK
Trigger: TTTTGTAACTGAAGAAGCCCAGTGTGAGCTTCTCAT...TCCTATAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440394.7
CDS-3UTR CCA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCATGAGAAGCTCACACTaGGCTTCTTCAGTTACAAAA +
Preference number: 4 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFMRSSH*ASSVTK
Trigger: TTTTGTAACTGAAGAAGCCCAGTGTGAGCTTCTCAT...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AAAGCTGCAGGCGGGGACAACAGGGTCTCATATGTCAACTTTGTATGTTCTCTTCCAAATGCCAGTGGATaGGCGGCTCAGAAACATTTA +
Preference number: 4 (lower is better)
Translates to: KAAGGDNRVSYVNFVCSLPNASG*AAQKHL
Trigger: TAAATGTTTCTGAGCCGCCCATCCACTGGCATTTGG...AAGAGAACATACAAAGTTGACATATGAGACCCTGTTGTCCCCGCCTGCAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTACACTCAAGTAACATaGTCAACAGGAGGGCGGGAT +
Preference number: 4 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVYTQVT*STGGRD
Trigger: ATCCCGCCCTCCTGTTGACCATGTTACTTGAGTGTA...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATCCAGAAGGAACTGACATaGAGGACAGTCTGTTCCACC +
Preference number: 4 (lower is better)
Translates to: KAPIVILEHSALWSIGGIQKELT*RTVCST
Trigger: GGTGGAACAGACTGTCCTCCATGTCAGTTCCTTCTG...GATGCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACAAATCCCAGACACCACCATaGAGGCTGCTACTGTTACCA +
Preference number: 4 (lower is better)
Translates to: STWFTGTAMNRIEVTDHKSQTPP*RLLLLP
Trigger: TGGTAACAGTAGCAGCCTCCATGGTGGTGTCTGGGA...TTTGTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTACTCCTCATCCTGGTCTaGGGAGGGCTTGTGATTTGT +
Preference number: 4 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVLLILV*GGLVIC
Trigger: ACAAATCACAAGCCCTCCCCAGACCAGGATGAGGAG...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000588412.5
3UTR CAA 72 bp CACTCTTCTTCGTGCCCTCTTTATGGTGACATTGGTTaGGGGTGCAGATCTTTAGGTGCTAAAGGGCAACTA +
Preference number: 4 (lower is better)
Translates to: HSSSCPLYGDIG*GCRSLGAKGQL
Trigger: TAGTTGCCCTTTAGCACCTAAAGATCTGCACCCCAAACCAATGTCACCATAAAGAGGGCACGAAGAAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp ACACACCTTAAGATCGGGGAGGGGAAGGACATGCTATTTACTGCTTCAACTCCACCAGCTGTCCAATCTTaGAGAAGTATCTTACACCAT +
Preference number: 4 (lower is better)
Translates to: THLKIGEGKDMLFTASTPPAVQS*RSILHH
Trigger: ATGGTGTAAGATACTTCTTCAAGATTGGACAGCTGG...TGGAGTTGAAGCAGTAAATAGCATGTCCTTCCCCTCCCCGATCTTAAGGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCATGTCAAAAATGGGAACCTTGTaGGGTGTCTCTATGGCTACA +
Preference number: 4 (lower is better)
Translates to: HPLSLLNSKSIPGFILMSKMGTL*GVSMAT
Trigger: TGTAGCCATAGAGACACCTCACAAGGTTCCCATTTT...TGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp GGTGGCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGAGGTCAGGAAAGGTGTaGGCAGAAAATCAACAACAA +
Preference number: 4 (lower is better)
Translates to: GGSSSERFDPLSTLDIKKRSGKV*AENQQQ
Trigger: TTGTTGTTGATTTTCTGCTCACACCTTTCCTGACCT...CTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp TTCCTTGCTGTTCACAGAGACCAGACAGATGATATCGGTCCCGGAAATGCTTCTGCTTTTAGGTGTTTCTaGACCCACATTTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: FLAVHRDQTDDIGPGNASAFRCF*THIFMV
Trigger: GACCATGAAAATGTGGGTTCAGAAACACCTAAAAGC...AGAAGCATTTCCGGGACCGATATCATCTGTCTGGTCTCTGTGAACAGCAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCCTTGATGCTATTCATTaGAGAACTCAATTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLLDAIH*RTQFAL
Trigger: GAGAGCAAATTGAGTTCTTCAATGAATAGCATCAAG...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp CTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACTTTAGGGTCTGCTTTTaGGTCTCAATACGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LSTWFTGTAMNRIEVTDHFRVCF*VSIRSS
Trigger: GGAGCTGCGTATTGAGACTCAAAAGCAGACCCTAAA...GTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CTTGGGGTCAGCTTTCTGATTTGCAACATGAAGCTGGCTGAATTCCACGAGGTATTCGATTTCAGCATCTaGATTTCCTCTTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LGVSFLICNMKLAEFHEVFDFSI*ISSSRS
Trigger: AGACCTGGAAGAGGAAATTCAGATGCTGAAATCGAA...TACCTCGTGGAATTCAGCCAGCTTCATGTTGCAAATCAGAAAGCTGACCCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp ACACACCTTAAGATCGGGGAGGGGAAGGACATGCTATTTACTGCTTCAACTCCATTCGATTTCAGCATCTaGATTTCCTCTTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: THLKIGEGKDMLFTASTPFDFSI*ISSSRS
Trigger: AGACCTGGAAGAGGAAATTCAGATGCTGAAATCGAA...TGGAGTTGAAGCAGTAAATAGCATGTCCTTCCCCTCCCCGATCTTAAGGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CAGACAGATGATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGAGTGCTGTTTACTATCTaGGAACTGGTTTGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: QTDDIGPGNASSQKQCHRVLFTI*ELVCEC
Trigger: ACACTCACAAACCAGTTCTCAGATAGTAAACAGCAC...TCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATCATCTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AAGGCTGTTATCACACCGCAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTCATCCAACATGTCCTTaGGGTCATGTATCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: KAVITPQFFTLWWIKRDAHPTCP*GHVSLQ
Trigger: CTGGAGAGATACATGACCTCAAGGACATGTTGGATG...AGCATCTCGCTTTATCCACCATAACGTAAAGAACTGCGGTGTGATAACAGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACACATCCAACATGTCCTTaGGGTCATGTATCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RFDPLSTLDIKKVSVETTHPTCP*GHVSLQ
Trigger: CTGGAGAGATACATGACCTCAAGGACATGTTGGATG...TGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp TGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCATTTTCAATCTTCTTCTaGAGAACATTAACCTTCCGC +
Preference number: 4 (lower is better)
Translates to: CRDNGLLSAEEWRWQTPAFSIFF*RTLTFR
Trigger: GCGGAAGGTTAATGTTCTTCAGAAGAAGATTGAAAA...TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCTTTTCAATCTTCTTCTaGAGAACATTAACCTTCCGC +
Preference number: 4 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFFSIFF*RTLTFR
Trigger: GCGGAAGGTTAATGTTCTTCAGAAGAAGATTGAAAA...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp AAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATCCGCCTTGCAACAGGCTaGCTTTTTCCTTCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: KAPIVILEHSALWSIGGIRLATG*LFPSSL
Trigger: AAGACTTGAAGGAAAAAGTCAGCCTGTTGCAAGGCG...GATGCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp GGTGGCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGCGAAGATTAGTCAAGTaGGTTTCCTTTTCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: GGSSSERFDPLSTLDIKKRRLVK*VSFSAR
Trigger: TCTGGCAGAAAAGGAAACTCACTTGACTAATCTTCG...CTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp CAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTAACACTCCTGCCTTTCAGTGGAATGGGAGGATTTaGAGTGGTCATCCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: QFFTLWWIKRDANTPAFQWNGRI*SGHPRS
Trigger: ACTACGAGGATGACCACTTCAAATCCTCCCATTCCA...CTGAAAGGCAGGAGTGTTAGCATCTCGCTTTATCCACCATAACGTAAAGAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTACTCTTCCAGGGCGTTaGCCACTTGCTCTAGGATGT +
Preference number: 4 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGTLPGR*PLALGC
Trigger: ACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGT...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp TCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCTTTCTGATCCTCTCAGCCTGTTaGACTCCAAGTCCATTCCTG +
Preference number: 4 (lower is better)
Translates to: SLTMPIPSLICSLGVSFLILSAC*TPSPFL
Trigger: CAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGAT...CAGAAAGCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGGCTGGATGATCGTTGGCCGAGGAACAGAGTaGGGAAGGCTGCGACAGACA +
Preference number: 4 (lower is better)
Translates to: NFNLLLFWSSSKRGWMIVGRGTE*GRLRQT
Trigger: TGTCTGTCGCAGCCTTCCTCACTCTGTTCCTCGGCC...AACGATCATCCAGCCCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000588412.5
CDS-3UTR TCA 90 bp TCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTACAACATGAAGCTGGCTaGATTCCACGAGGTACATGC +
Preference number: 4 (lower is better)
Translates to: SSERFDPLSTLDIKKVSVQHEAG*IPRGTC
Trigger: GCATGTACCTCGTGGAATTCAGCCAGCTTCATGTTG...TACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GCAGTTGTATGCCCATATGAAACCATGACCACTAGGAGAGGGGCATGGAATGACCTGCCTAATTATTTATaGCTGCTGTTGTCTACGCTA +
Preference number: 4 (lower is better)
Translates to: AVVCPYETMTTRRGAWNDLPNYL*LLLSTL
Trigger: TAGCGTAGACAACAGCAGTCATAAATAATTAGGCAG...GTCATTCCATGCCCCTCTCCTAGTGGTCATGGTTTCATATGGGCATACAACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCCTCAATGAGACACTCTaGAAGCTACAAACTGCATCC +
Preference number: 4 (lower is better)
Translates to: ERFDPLSTLDIKKVSVETLNETL*KLQTAS
Trigger: GGATGCAGTTTGTAGCTTTCAGAGTGTCTCATTGAG...GGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCCTCAATGAGACACTCTaGAAGCTACAAACTGCATCC +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGLNETL*KLQTAS
Trigger: GGATGCAGTTTGTAGCTTTCAGAGTGTCTCATTGAG...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGACTCTACAGACTTTAAATTCTAGGTATATGAAAAGATaGGAAGCTCACACTGGGCTT +
Preference number: 4 (lower is better)
Translates to: VGSSWTDGAVLTLQTLNSRYMKR*EAHTGL
Trigger: AAGCCCAGTGTGAGCTTCTCATCTTTTCATATACCT...AGAATTTAAAGTCTGTAGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGAGATACCTCATCAATaGTTCAATGAGTACCGGGGG +
Preference number: 4 (lower is better)
Translates to: AVLQRDSTLYLPWTSRRLEIPHQ*FNEYRG
Trigger: CCCCCGGTACTCATTGAATCATTGATGAGGTATCTC...TAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGGAAGCATCTCAGTAAGAGGTTTATGAGCAGAGTCCATTTAACCTTCGATAAGATTACTGGTATTTGCTaGCACAGGGTCCGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RKHLSKRFMSRVHLTFDKITGIC*HRVRWA
Trigger: AGCCCAGCGGACCCTGTGTCAGCAAATACCAGTAAT...CTTATCGAAGGTTAAATGGACTCTGCTCATAAACCTCTTACTGAGATGCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CTTGGGGTCAGCTTTCTGATTTGCAACATGAAGCTGGCTGAATTCCACGAGGTAGGCTGCCCCATAGCTTaGATTCCTTTATTAACAAGA +
Preference number: 4 (lower is better)
Translates to: LGVSFLICNMKLAEFHEVGCPIA*IPLLTR
Trigger: TCTTGTTAATAAAGGAATTCAAGCTATGGGGCAGCC...TACCTCGTGGAATTCAGCCAGCTTCATGTTGCAAATCAGAAAGCTGACCCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGAGCATGAGCATCACATaGAAAAAGGCAGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: RDANTPAFQCWELSTWFTSMSIT*KKAVFP
Trigger: TGGAAAAACTGCCTTTTTTCATGTGATGCTCATGCT...CGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000355446.9
CDS-3UTR TCA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTTCCACCTGTAGCTGCTaGGAGCTGTCGTTGAGATTG +
Preference number: 4 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFSTCSC*ELSLRL
Trigger: CAATCTCAACGACAGCTCTCAGCAGCTACAGGTGGA...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347735.10
ENST00000542302.6
CDS-3UTR GCA 90 bp AGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTGTGATGCTCTCCAAATaGTATGGTGTCACTAGCAAC +
Preference number: 4 (lower is better)
Translates to: RYVSQNPLHLSLTEKWPFVMLSK*YGVTSN
Trigger: GTTGCTAGTGACACCATAGCATTTGGAGAGCATCAC...AAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGGTGATGCTCTCCAAATaGTATGGTGTCACTAGCAAC +
Preference number: 4 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVVMLSK*YGVTSN
Trigger: GTTGCTAGTGACACCATAGCATTTGGAGAGCATCAC...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp AGGAAGCATCTCAGTAAGAGGTTTATGAGCAGAGTCCATTTAACCTTCGATAAGCTCCTCTGTCAGCTCTaGTACACAAGGTTCGCCAGT +
Preference number: 4 (lower is better)
Translates to: RKHLSKRFMSRVHLTFDKLLCQL*YTRFAS
Trigger: ACTGGCGAACCTTGTGTAGCAGAGCTGACAGAGGAG...CTTATCGAAGGTTAAATGGACTCTGCTCATAAACCTCTTACTGAGATGCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp ACACACCTTAAGATCGGGGAGGGGAAGGACATGCTATTTACTGCTTCAACTCCATGGCAGAAAGTCCTTTaGTCTGCAACATTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: THLKIGEGKDMLFTASTPWQKVL*SATFPE
Trigger: TTCTGGAAATGTTGCAGAGCAAAGGACTTTCTGCCA...TGGAGTTGAAGCAGTAAATAGCATGTCCTTCCCCTCCCCGATCTTAAGGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTGGCAGAAAGTCCTTTaGTCTGCAACATTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: AERQSKMADVETVLESHFWQKVL*SATFPE
Trigger: TTCTGGAAATGTTGCAGAGCAAAGGACTTTCTGCCA...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp ATGACTGCTGTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATTGATTGTGCATCTCTGCCTCTaGCAGTCGTCTTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: MTAVVYATSLTMPIPSLIVHLCL*QSSCSL
Trigger: GAGAGAACAAGACGACTGGCAGAGGCAGAGATGCAC...AATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAACAGCAGTCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAATGAACGTGCATCTCTaGCTCTGCCAGTCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: SSERFDPLSTLDIKKVSVMNVHL*LCQSSC
Trigger: ACAAGACGACTGGCAGAGGCAGAGATGCACGTTCAT...TACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp TCCAGCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGTTCTCAAACCTTCGATaGATCTCCTCTCTCAACATA +
Preference number: 4 (lower is better)
Translates to: SSRYVSQNPLHLSLTEKWFSNLR*ISSLNI
Trigger: TATGTTGAGAGAGGAGATGCATCGAAGGTTTGAGAA...CCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGGAAGCATCTCAGTAAGAGGTTTATGAGCAGAGTCCATTTAACCTTCGATAAGTGTCCGCTCTTTCTCTaGAAGGGCCTCCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: RKHLSKRFMSRVHLTFDKCPLFL*KGLLQS
Trigger: ACTTTGGAGGAGGCCCTTGCAGAGAAAGAGCGGACA...CTTATCGAAGGTTAAATGGACTCTGCTCATAAACCTCTTACTGAGATGCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATCTCTGAAAGGTCGCCTTaGAACAGGCTGACTTTTTCC +
Preference number: 4 (lower is better)
Translates to: KAPIVILEHSALWSIGGISERSP*NRLTFS
Trigger: GGAAAAAGTCAGCCTGTTGCAAGGCGACCTTTCAGA...GATGCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCGCCAGAGAAGAAGCATaGTCTTTCAGATCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: AERQSKMADVETVLESHFAREEA*SFRSKS
Trigger: ACTTTTGGATCTGAAAGAGCATGCTTCTTCTCTGGC...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCTCTGGCTTCCAATGCTaGCTCATGTGCCTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGSGFQC*LMCLFQ
Trigger: TTGAAAAAGGCACATGAGGCAGCATTGGAAGCCAGA...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp CATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCATGTCATCTGGCTTCCAATGCTaGCTCATGTGCCTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: HPLSLLNSKSIPGFILMSSGFQC*LMCLFQ
Trigger: TTGAAAAAGGCACATGAGGCAGCATTGGAAGCCAGA...TGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGGCTCTGGCTTCCAATaGTGCCTCATGTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVGSGFQ*CLMCLF
Trigger: AAAAAGGCACATGAGGCAGCATTGGAAGCCAGAGCC...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTTGTGCTTCAGATTTaGTACCTTCTTATTCTGGTC +
Preference number: 4 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVLVLQI*YLLILV
Trigger: GACCAGAATAAGAAGGTAGCAAATCTGAAGCACAAG...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCTTGTGCTTCAGATTTaGTACCTTCTTATTCTGGTC +
Preference number: 4 (lower is better)
Translates to: VCYLLKNGVGKLLQFCIVLVLQI*YLLILV
Trigger: GACCAGAATAAGAAGGTAGCAAATCTGAAGCACAAG...GACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTAACTCACTTGTGCTTCAGATTTaGTACCTTCTTATTCTGGTC +
Preference number: 4 (lower is better)
Translates to: ALANSCSSALSRSPFSNSLVLQI*YLLILV
Trigger: GACCAGAATAAGAAGGTAGCAAATCTGAAGCACAAG...TGAGTTAGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGCACCATTTCCCGCTCTaGAGTTATCTGTACACTTTC +
Preference number: 4 (lower is better)
Translates to: DGRCRNGAGITLLQVSKLHHFPL*SYLYTF
Trigger: GAAAGTGTACAGATAACTGCAGAGCGGGAAATGGTG...CAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp CTAACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGGTGTTTCCTTCTCTCTaGCCGAAGATTAGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: LTPQYDNVNSLKQERLVEVFPSL*PKISQV
Trigger: CACTTGACTAATCTTCGGGCAGAGAGAAGGAAACAC...CTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp GAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCAAACTCCTGCAGTTCTaGATTGTCCCGTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: ERFDPLSTLDIKKVSVETKLLQF*IVPFTF
Trigger: AAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTT...GGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGAAACTCCTGCAGTTCTaGATTGTCCCGTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVKLLQF*IVPFTF
Trigger: AAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTT...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp AGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTCGGGACAATGGTCTaGTATCTGCTGAAGAATGGC +
Preference number: 4 (lower is better)
Translates to: SSSERFDPLSTLDIKKVSVGTMV*YLLKNG
Trigger: GCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC...ACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTAGGGCGTTGACCACTTaGTCTAGGATGTCGGGACAA +
Preference number: 4 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGRALTT*SRMSGQ
Trigger: TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCT...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp AGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTTTGTAGTGTTTGGTaGCAAGAAGGTTCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: SSSERFDPLSTLDIKKVSVCSVW*QEGSGH
Trigger: GTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC...ACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp AGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTTGTTGCCCTGGCTGGTaGTCTTTCAACCTCACATGT +
Preference number: 4 (lower is better)
Translates to: SSSERFDPLSTLDIKKVSCCPGW*SFNLTC
Trigger: ACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACA...ACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp TCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACAAATGTTGCCCTGGCTGGTaGTCTTTCAACCTCACATGT +
Preference number: 4 (lower is better)
Translates to: STWFTGTAMNRIEVTDHKCCPGW*SFNLTC
Trigger: ACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACA...TTTGTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGGAAGCATCTCAGTAAGAGGTTTATGAGCAGAGTCCATTTAACCTTCGATAAGGAAGGTTCCAGGCAATaGACGAGGCTGAGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: RKHLSKRFMSRVHLTFDKEGSRQ*TRLRFR
Trigger: TCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTC...CTTATCGAAGGTTAAATGGACTCTGCTCATAAACCTCTTACTGAGATGCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GGTGGCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGGACATGCTATTTACTaGTTCAACTCCAGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: GGSSSERFDPLSTLDIKKGHAIY*FNSSRY
Trigger: ATACCTGCTGGAGTTGAAGCAGTAAATAGCATGTCC...CTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTATACCTTCATTGATTTaGAGTCTTGGGGTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: EEWRWQTPAVLHCPVHLSIPSLI*SLGVSF
Trigger: AAAGCTGACCCCAAGACTGCAAATCAATGAAGGTAT...AGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355446.9
ENST00000440394.7
CDS-3UTR GCA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTGGAGATGTGAGTGTCTaGTGGGTTCTGGTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGGDVSV*WVLVVE
Trigger: CTCTACCACCAGAACCCAGCAGACACTCACATCTCC...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACATATCGGTCCCGGAAATaGTTCTTCTCAGAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: RFDPLSTLDIKKVSVETTYRSRK*FFSEAV
Trigger: CACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATA...TGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGGAAGCATCTCAGTAAGAGGTTTATGAGCAGAGTCCATTTAACCTTCGATAAGAAACTGCATCCACTCTaGCCTACAGCACGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: RKHLSKRFMSRVHLTFDKKLHPL*PTARRP
Trigger: TGGCCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTT...CTTATCGAAGGTTAAATGGACTCTGCTCATAAACCTCTTACTGAGATGCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGAAATTAAGGGCAACCTaGACTGAGTTTTCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: RDANTPAFQCWELSTWFTKLRAT*TEFSRL
Trigger: TAGCCTTGAAAACTCAGTGCAGGTTGCCCTTAATTT...CGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CTAGGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTAAATTAAGGGCAACCTaGACTGAGTTTTCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: LGCRDNGLLSAEEWRWQTKLRAT*TEFSRL
Trigger: TAGCCTTGAAAACTCAGTGCAGGTTGCCCTTAATTT...AGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440394.7
CDS-3UTR GCA 90 bp TTCCTTGCTGTTCACAGAGACCAGACAGATGATATCGGTCCCGGAAATGCTTCTGACATTGGTTTGGGGTaGAGATCTTTAGGTGCTAAA +
Preference number: 4 (lower is better)
Translates to: FLAVHRDQTDDIGPGNASDIGLG*RSLGAK
Trigger: TTTAGCACCTAAAGATCTGCACCCCAAACCAATGTC...AGAAGCATTTCCGGGACCGATATCATCTGTCTGGTCTCTGTGAACAGCAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTGGTATCAAAGTCCTTaGAAATCTCAATTGAGATAC +
Preference number: 4 (lower is better)
Translates to: LVHWRHPLSLLNSKSIPGWYQSP*KSQLRY
Trigger: GTATCTCAATTGAGATTTGCAAGGACTTTGATACCA...ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGGAAGCATCTCAGTAAGAGGTTTATGAGCAGAGTCCATTTAACCTTCGATAAGGGGTGCCTGCTGCATTaGAGTCTCTTCTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: RKHLSKRFMSRVHLTFDKGCLLH*SLFSSF
Trigger: GAAGGATGAGAAGAGACTGCAATGCAGCAGGCACCC...CTTATCGAAGGTTAAATGGACTCTGCTCATAAACCTCTTACTGAGATGCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp ATGAGACACTCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGAATTCTTCCCTAATTTaGATGGGGGAAACTCCAGAT +
Preference number: 4 (lower is better)
Translates to: MRHSESYKLHPLCPTARRNSSLI*MGETPD
Trigger: ATCTGGAGTTTCCCCCATGCAAATTAGGGAAGAATT...CCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGAGTGTCTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TTCCTTGCTGTTCACAGAGACCAGACAGATGATATCGGTCCCGGAAATGCTTCTCAGACACAATGTAACTaGCCCAATTCTCTGAATCAC +
Preference number: 4 (lower is better)
Translates to: FLAVHRDQTDDIGPGNASQTQCN*PNSLNH
Trigger: GTGATTCAGAGAATTGGGGCAGTTACATTGTGTCTG...AGAAGCATTTCCGGGACCGATATCATCTGTCTGGTCTCTGTGAACAGCAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACGATTCTCGTTCCTTTTaGTCGGCAGGTGTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: GVGHLVKCWFNDLDSMRHDSRSF*SAGVSC
Trigger: GCAAGAGACACCTGCCGAGCAAAAGGAACGAGAATC...GTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACACACCACCATGGAGGCTaGTACTGTTACCAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: RFDPLSTLDIKKVSVETTHHHGG*YCYQKE
Trigger: TTCCTTTTGGTAACAGTAGCAGCCTCCATGGTGGTG...TGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATCTATGGCTACAAGTTaGTTTAAGGTTAATCAGAAG +
Preference number: 4 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPSMATS*FKVNQK
Trigger: CTTCTGATTAACCTTAAACCAACTTGTAGCCATAGA...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp TTCCTTGCTGTTCACAGAGACCAGACAGATGATATCGGTCCCGGAAATGCTTCTTGTGAGGTGTCTCTATaGCTACAAGTTGGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: FLAVHRDQTDDIGPGNASCEVSL*LQVGLR
Trigger: CCTTAAACCAACTTGTAGCCATAGAGACACCTCACA...AGAAGCATTTCCGGGACCGATATCATCTGTCTGGTCTCTGTGAACAGCAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACGGGCACTTCCATACATaGTTGCAAGGTCAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GVGHLVKCWFNDLDSMRHGHFHT*LQGQER
Trigger: CCTTTCCTGACCTTGCAACCATGTATGGAAGTGCCC...GTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AAGGCTGTTATCACACCGCAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTTTCCTTCTTCAGCTCTaGGCTCCAGAAGGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: KAVITPQFFTLWWIKRDAFLLQL*APEGLD
Trigger: ATCAAGACCTTCTGGAGCCCAGAGCTGAAGAAGGAA...AGCATCTCGCTTTATCCACCATAACGTAAAGAACTGCGGTGTGATAACAGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCGTCATCTGCATGTGCTaGTTTTCCTCCTGTACAACT +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGVICMC*FSSCTT
Trigger: AGTTGTACAGGAGGAAAACCAGCACATGCAGATGAC...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp TTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTATCCGCAATTCATCCTaGAGAGCCTGGATTGTCATC +
Preference number: 4 (lower is better)
Translates to: FQCWELSTWFTGTAMNRIIRNSS*RAWIVI
Trigger: GATGACAATCCAGGCTCTCCAGGATGAATTGCGGAT...AATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGACTCTACAGACTTTAAATTCTGCAGAGCTTTTGTTTTaGCAGAATCAGGAGCATTCT +
Preference number: 4 (lower is better)
Translates to: VGSSWTDGAVLTLQTLNSAELLF*QNQEHS
Trigger: AGAATGCTCCTGATTCTGCCAAAACAAAAGCTCTGC...AGAATTTAAAGTCTGTAGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTCGATCAACTTCTGCCTaGGCCTTGCTAGATTCATCT +
Preference number: 4 (lower is better)
Translates to: FQCWELSTWFTGTAMNRIRSTSA*ALLDSS
Trigger: AGATGAATCTAGCAAGGCCCAGGCAGAAGTTGATCG...AATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCATGTCACCTGTTTTTCAGCATTaGTCCTGGCTGATTCCTCTT +
Preference number: 4 (lower is better)
Translates to: HPLSLLNSKSIPGFILMSPVFQH*SWLIPL
Trigger: AAGAGGAATCAGCCAGGACCAATGCTGAAAAACAGG...TGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGCCTGTTTTTCAGCATTaGTCCTGGCTGATTCCTCTT +
Preference number: 4 (lower is better)
Translates to: RQSKMADVETVLESHFFKPVFQH*SWLIPL
Trigger: AAGAGGAATCAGCCAGGACCAATGCTGAAAAACAGG...CTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp GATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGCCTGTTTTTCAGCATTaGTCCTGGCTGATTCCTCTT +
Preference number: 4 (lower is better)
Translates to: DGRCRNGAGITLLQVSKLPVFQH*SWLIPL
Trigger: AAGAGGAATCAGCCAGGACCAATGCTGAAAAACAGG...CAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCACAGCTTTGCTTTCATaGATTCTAGTTCCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFTALLS*ILVPAL
Trigger: TAAAGCAGGAACTAGAATCCATGAAAGCAAAGCTGT...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACACAGCTTTGCTTTCATaGATTCTAGTTCCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: PAFQCWELSTWFTGTAMNTALLS*ILVPAL
Trigger: TAAAGCAGGAACTAGAATCCATGAAAGCAAAGCTGT...GTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACAAAGTTATAGGAAGCTGGTaGAGTGAGTCCACGGAGGAT +
Preference number: 4 (lower is better)
Translates to: STWFTGTAMNRIEVTDHKVIGSW*SESTED
Trigger: ATCCTCCGTGGACTCACTCCACCAGCTTCCTATAAC...TTTGTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACGTTATAGGAAGCTGGTaGAGTGAGTCCACGGAGGAT +
Preference number: 4 (lower is better)
Translates to: GVGHLVKCWFNDLDSMRHVIGSW*SESTED
Trigger: ATCCTCCGTGGACTCACTCCACCAGCTTCCTATAAC...GTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCTAGTGTGATGGGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACCTATCTGCTGAAGAATaGCGTTGGCAAACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PSVMGVGHLVKCWFNDLDLSAEE*RWQTPA
Trigger: TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAG...GTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCCCATCACACTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATCCTATCTGCTGAAGAATaGCGTTGGCAAACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: KAPIVILEHSALWSIGGILSAEE*RWQTPA
Trigger: TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAG...GATGCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp GCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGAAGTTTGTAGTGTTTaGTGCCAAGAAGGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: AVLQRDSTLYLPWTSRRLEVCSV*CQEGSG
Trigger: CCCGGAACCTTCTTGGCACCAAACACTACAAACTTC...TAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp GCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTACTGCTGATGACCAGGTaGCAGTTCTTCAGAGAGATT +
Preference number: 4 (lower is better)
Translates to: AVLQRDSTLYLPWTSRRLLLMTR*QFFREI
Trigger: AATCTCTCTGAAGAACTGCCACCTGGTCATCAGCAG...TAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp GGTGGCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGCTCCAAGTCCATTCCTaGTTTCATTCTCATGTCAGA +
Preference number: 4 (lower is better)
Translates to: GGSSSERFDPLSTLDIKKLQVHS*FHSHVR
Trigger: TCTGACATGAGAATGAAACCAGGAATGGACTTGGAG...CTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp GAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTACAAAGCATCTCATGTaGAAAGTAAGCAGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: EEWRWQTPAVLHCPVHLSTKHLM*KVSRRD
Trigger: GTCTCTTCTGCTTACTTTCCACATGAGATGCTTTGT...AGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000588412.5
CDS-3UTR CCA 90 bp GAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGACAAAGCATCTCATGTaGAAAGTAAGCAGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: EMLTLLPFSAGSFLHGLRTKHLM*KVSRRD
Trigger: GTCTCTTCTGCTTACTTTCCACATGAGATGCTTTGT...CCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACAAAAACAGGAGAGACTGGTaGAGAACACCTCACACCATC +
Preference number: 4 (lower is better)
Translates to: STWFTGTAMNRIEVTDHKNRRDW*RTPHTI
Trigger: GATGGTGTGAGGTGTTCTCCACCAGTCTCTCCTGTT...TTTGTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAAACAGGAGAGACTGGTaGAGAACACCTCACACCATC +
Preference number: 4 (lower is better)
Translates to: SSERFDPLSTLDIKKVSVNRRDW*RTPHTI
Trigger: GATGGTGTGAGGTGTTCTCCACCAGTCTCTCCTGTT...TACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp CCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACTTCTTTACGTTATGGTaGATAAAGCGAGATGCTAAC +
Preference number: 4 (lower is better)
Translates to: PAFQCWELSTWFTGTAMNFFTLW*IKRDAN
Trigger: GTTAGCATCTCGCTTTATCCACCATAACGTAAAGAA...GTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AAGGCTGTTATCACACCGCAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTGTTACAAAACCCCGTTaGGATCACACCCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: KAVITPQFFTLWWIKRDAVTKPR*DHTHSS
Trigger: AGAAGAGTGGGTGTGATCCCAACGGGGTTTTGTAAC...AGCATCTCGCTTTATCCACCATAACGTAAAGAACTGCGGTGTGATAACAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTACCAAATGCCAGTGGATaGGCGGCTCAGAAACATTTA +
Preference number: 4 (lower is better)
Translates to: AVLQRDSTLYLPWTSRRLPNASG*AAQKHL
Trigger: TAAATGTTTCTGAGCCGCCCATCCACTGGCATTTGG...TAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AAGGCTGTTATCACACCGCAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTTACACTCAAGTAACATaGTCAACAGGAGGGCGGGAT +
Preference number: 4 (lower is better)
Translates to: KAVITPQFFTLWWIKRDAYTQVT*STGGRD
Trigger: ATCCCGCCCTCCTGTTGACCATGTTACTTGAGTGTA...AGCATCTCGCTTTATCCACCATAACGTAAAGAACTGCGGTGTGATAACAGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCTTTCTGGCGGTCTTCTCTGCTTaGCTCTTTCCTCAAAGACTC +
Preference number: 4 (lower is better)
Translates to: SLTMPIPSLICSLGVSFLAVFSA*LFPQRL
Trigger: GAGTCTTTGAGGAAAGAGCCAAGCAGAGAAGACCGC...CAGAAAGCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACAAAAAAGAAGAGAGGAGGTaGGATGGGACAAAAACCCGC +
Preference number: 4 (lower is better)
Translates to: STWFTGTAMNRIEVTDHKKEERR*DGTKTR
Trigger: GCGGGTTTTTGTCCCATCCCACCTCCTCTCTTCTTT...TTTGTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGCCAGCTGTCCAATCTTaGAGAAGTATCTTACACCAT +
Preference number: 4 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVPAVQS*RSILHH
Trigger: ATGGTGTAAGATACTTCTTCAAGATTGGACAGCTGG...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp CTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACAAAATGGGAACCTTGTaGGGTGTCTCTATGGCTACA +
Preference number: 4 (lower is better)
Translates to: LSTWFTGTAMNRIEVTDHKMGTL*GVSMAT
Trigger: TGTAGCCATAGAGACACCTCACAAGGTTCCCATTTT...GTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCATGTCAAGGTCAGGAAAGGTGTaGGCAGAAAATCAACAACAA +
Preference number: 4 (lower is better)
Translates to: HPLSLLNSKSIPGFILMSRSGKV*AENQQQ
Trigger: TTGTTGTTGATTTTCTGCTCACACCTTTCCTGACCT...TGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACGCTTTTAGGTGTTTCTaGACCCACATTTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: TPQYDNVNSLKQERLVENAFRCF*THIFMV
Trigger: GACCATGAAAATGTGGGTTCAGAAACACCTAAAAGC...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCTTTCTGGTGTCTGCAGATCCATaGTTGTGTTATCTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: SLTMPIPSLICSLGVSFLVSADP*LCYLSP
Trigger: AGGCGAGAGATAACACAATCATGGATCTGCAGACAC...CAGAAAGCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTGGTTTGGGGTGCAGATCTTCTTGATGCTATTCATTaGAGAACTCAATTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: PTLLRALFMVTLVWGADLLDAIH*RTQFAL
Trigger: GAGAGCAAATTGAGTTCTTCAATGAATAGCATCAAG...AAGATCTGCACCCCAAACCAATGTCACCATAAAGAGGGCACGAAGAAGAGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTTGATGCTATTCATTaGAGAACTCAATTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVLDAIH*RTQFAL
Trigger: GAGAGCAAATTGAGTTCTTCAATGAATAGCATCAAG...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTCTTGATGCTATTCATTaGAGAACTCAATTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSLDAIH*RTQFAL
Trigger: GAGAGCAAATTGAGTTCTTCAATGAATAGCATCAAG...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp TTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACATCCTTCGATTTCAGCATCTaGATTTCCTCTTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: FDPLSTLDIKKVSVETTSFDFSI*ISSSRS
Trigger: AGACCTGGAAGAGGAAATTCAGATGCTGAAATCGAA...GGATGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCTTCGATTTCAGCATCTaGATTTCCTCTTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGFDFSI*ISSSRS
Trigger: AGACCTGGAAGAGGAAATTCAGATGCTGAAATCGAA...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp TCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCTTTCTGTTCAGCTCCTCCCATTaGGCCTCTTTCGAACTTAGT +
Preference number: 4 (lower is better)
Translates to: SLTMPIPSLICSLGVSFLFSSSH*ASFELS
Trigger: ACTAAGTTCGAAAGAGGCTCAATGGGAGGAGCTGAA...CAGAAAGCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000589028.5
CDS-3UTR TCA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTATTCAGCTCCTCCCATTaGGCCTCTTTCGAACTTAGT +
Preference number: 4 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVFSSSH*ASFELS
Trigger: ACTAAGTTCGAAAGAGGCTCAATGGGAGGAGCTGAA...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000542302.6
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp GAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCGTGCTGTTTACTATCTaGGAACTGGTTTGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: ERFDPLSTLDIKKVSVETVLFTI*ELVCEC
Trigger: ACACTCACAAACCAGTTCTCAGATAGTAAACAGCAC...GGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp TTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACATCCGTGCTGTTTACTATCTaGGAACTGGTTTGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: FDPLSTLDIKKVSVETTSVLFTI*ELVCEC
Trigger: ACACTCACAAACCAGTTCTCAGATAGTAAACAGCAC...GGATGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp AGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGGTGCTGTTTACTATCTaGGAACTGGTTTGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: RQSKMADVETVLESHFFKVLFTI*ELVCEC
Trigger: ACACTCACAAACCAGTTCTCAGATAGTAAACAGCAC...CTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp CCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTGGTTTGGGGTGCAGATCTTTTTTCAATCTTCTTCTaGAGAACATTAACCTTCCGC +
Preference number: 4 (lower is better)
Translates to: PTLLRALFMVTLVWGADLFSIFF*RTLTFR
Trigger: GCGGAAGGTTAATGTTCTTCAGAAGAAGATTGAAAA...AAGATCTGCACCCCAAACCAATGTCACCATAAAGAGGGCACGAAGAAGAGTGGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTTTTTCAATCTTCTTCTaGAGAACATTAACCTTCCGC +
Preference number: 4 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVFSIFF*RTLTFR
Trigger: GCGGAAGGTTAATGTTCTTCAGAAGAAGATTGAAAA...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp TATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCTTTTCAATCTTCTTCTaGAGAACATTAACCTTCCGC +
Preference number: 4 (lower is better)
Translates to: YLLKNGVGKLLQFCIVPFFSIFF*RTLTFR
Trigger: GCGGAAGGTTAATGTTCTTCAGAAGAAGATTGAAAA...GAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp TCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTACGCCTTGCAACAGGCTaGCTTTTTCCTTCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: SSERFDPLSTLDIKKVSVRLATG*LFPSSL
Trigger: AAGACTTGAAGGAAAAAGTCAGCCTGTTGCAAGGCG...TACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp ATGACTGCTGTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATTGATTGTCCTTTTTCAGTCCTaGGGATGCCAGAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: MTAVVYATSLTMPIPSLIVLFQS*GCQRRS
Trigger: GCTTCTTCTCTGGCATCCTCAGGACTGAAAAAGGAC...AATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAACAGCAGTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTGTCCTTTTTCAGTCCTaGGGATGCCAGAGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGVLFQS*GCQRRS
Trigger: GCTTCTTCTCTGGCATCCTCAGGACTGAAAAAGGAC...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp TGGCAGAGGGTTGTCAGGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGCTGTCCTGTAGCTGCTaGGAGCTGTCGTTGAGATTG +
Preference number: 4 (lower is better)
Translates to: WQRVVRCPMYNFNLLLFWLSCSC*ELSLRL
Trigger: CAATCTCAACGACAGCTCTCAGCAGCTACAGGACAG...CCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACCTGACAACCCTCTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000440394.7
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACCGAAGATTAGTCAAGTaGGTTTCCTTTTCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: TPQYDNVNSLKQERLVENRRLVK*VSFSAR
Trigger: TCTGGCAGAAAAGGAAACTCACTTGACTAATCTTCG...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp ATGACTGCTGTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATTGATTTGGTCTGCTATCTGCTaGAGAATGGCGTTGGCAAAC +
Preference number: 4 (lower is better)
Translates to: MTAVVYATSLTMPIPSLIWSAIC*RMALAN
Trigger: GTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCA...AATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAACAGCAGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGGGTTGTCAGGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTTCTTGGCTCCTGGGTTaGCTACCTCAGGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: RVVRCPMYNFNLLLFWSSSWLLG*LPQASP
Trigger: TGGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGA...ACTTGACCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACCTGACAACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp AGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTCACACTTCTTCAAGTaGGCAAGTTGGGATGAAGTT +
Preference number: 4 (lower is better)
Translates to: RQSKMADVETVLESHFFKSHFFK*ASWDEV
Trigger: AACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGA...CTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCAGACCCCCAAACTCATaGATTCCATTAGGGAACTTT +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGRPPNS*IPLGNF
Trigger: AAAGTTCCCTAATGGAATTCATGAGTTTGGGGGTCT...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGGAAGCATCTCAGTAAGAGGTTTATGAGCAGAGTCCATTTAACCTTCGATAAGTCTTATCAGGAGATGTaGGTGTCTGCTGGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: RKHLSKRFMSRVHLTFDKSYQEM*VSAGFW
Trigger: CCAGAACCCAGCAGACACTCACATCTCCTGATAAGA...CTTATCGAAGGTTAAATGGACTCTGCTCATAAACCTCTTACTGAGATGCTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTGGGGAGCTGGAAATCTaGCCATGTCAGTTAATGGGA +
Preference number: 4 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGGELEI*PCQLMG
Trigger: TCCCATTAACTGACATGGTCAGATTTCCAGCTCCCC...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACTCTGAAAGCTACCAGAGACCAGACAGATaGTATCGGTCCCGGAAATGC +
Preference number: 4 (lower is better)
Translates to: LVKCWFNDLDSMRHSESYQRPDR*YRSRKC
Trigger: GCATTTCCGGGACCGATATCATCTGTCTGGTCTCTG...GTAGCTTTCAGAGTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATCCTCAATGAGACACTCTaGAAGCTACAAACTGCATCC +
Preference number: 4 (lower is better)
Translates to: KAPIVILEHSALWSIGGILNETL*KLQTAS
Trigger: GGATGCAGTTTGTAGCTTTCAGAGTGTCTCATTGAG...GATGCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AAGGCTGTTATCACACCGCAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTCTCAATGAGACACTCTaGAAGCTACAAACTGCATCC +
Preference number: 4 (lower is better)
Translates to: KAVITPQFFTLWWIKRDALNETL*KLQTAS
Trigger: GGATGCAGTTTGTAGCTTTCAGAGTGTCTCATTGAG...AGCATCTCGCTTTATCCACCATAACGTAAAGAACTGCGGTGTGATAACAGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCATGTCAAGGTATATGAAAAGATaGGAAGCTCACACTGGGCTT +
Preference number: 4 (lower is better)
Translates to: HPLSLLNSKSIPGFILMSRYMKR*EAHTGL
Trigger: AAGCCCAGTGTGAGCTTCTCATCTTTTCATATACCT...TGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACAAATTTAAGACATTCCTTTaGGTGGTTCACGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: STWFTGTAMNRIEVTDHKFKTFL*VVHVPS
Trigger: GGAGGGGACGTGAACCACTCAAAGGAATGTCTTAAA...TTTGTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTTTTAAGACATTCCTTTaGGTGGTTCACGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SSSERFDPLSTLDIKKVSFKTFL*VVHVPS
Trigger: GGAGGGGACGTGAACCACTCAAAGGAATGTCTTAAA...ACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATCACTGCCCCAATTCTCTaGATCACACAGACAATATCG +
Preference number: 4 (lower is better)
Translates to: KAPIVILEHSALWSIGGITAPIL*ITQTIS
Trigger: CGATATTGTCTGTGTGATTCAGAGAATTGGGGCAGT...GATGCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGGGCTGCCCCATAGCTTaGATTCCTTTATTAACAAGA +
Preference number: 4 (lower is better)
Translates to: RQSKMADVETVLESHFFKGCPIA*IPLLTR
Trigger: TCTTGTTAATAAAGGAATTCAAGCTATGGGGCAGCC...CTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGATGCTCTCCAAATaGTATGGTGTCACTAGCAAC +
Preference number: 4 (lower is better)
Translates to: AVLQRDSTLYLPWTSRRLVMLSK*YGVTSN
Trigger: GTTGCTAGTGACACCATAGCATTTGGAGAGCATCAC...TAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp CATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTATAGGATTGAAGAACTCAATTTaGTCTCCTTTACTTCCACAT +
Preference number: 4 (lower is better)
Translates to: HLLQLILPSRLVIVQVIGLKNSI*SPLLPH
Trigger: ATGTGGAAGTAAAGGAGAGCAAATTGAGTTCTTCAA...TCCTATAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTGAAGAACTCAATTTaGTCTCCTTTACTTCCACAT +
Preference number: 4 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLLKNSI*SPLLPH
Trigger: ATGTGGAAGTAAAGGAGAGCAAATTGAGTTCTTCAA...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACTGGCAGAAAGTCCTTTaGTCTGCAACATTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: TPQYDNVNSLKQERLVENWQKVL*SATFPE
Trigger: TTCTGGAAATGTTGCAGAGCAAAGGACTTTCTGCCA...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCTTTCTGGTTTCTAGCTTTGTCTaGAGGGCGAGTAGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: SLTMPIPSLICSLGVSFLVSSFV*RASSSV
Trigger: CACAGAACTACTCGCCCTGCAGACAAAGCTAGAAAC...CAGAAAGCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACTTCAACACTTCAATGTaGTGTTTACTATCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: PAFQCWELSTWFTGTAMNFNTSM*CLLSEN
Trigger: GTTCTCAGATAGTAAACAGCACATTGAAGTGTTGAA...GTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACTCTGAAAGCTACTGTCCGCTCTTTCTCTaGAAGGGCCTCCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: LVKCWFNDLDSMRHSESYCPLFL*KGLLQS
Trigger: ACTTTGGAGGAGGCCCTTGCAGAGAAAGAGCGGACA...GTAGCTTTCAGAGTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTCATCTCTGTCCCTCTaGTCCTTTAAGCGTTCAATT +
Preference number: 4 (lower is better)
Translates to: RQSKMADVETVLESHFFKSSLSL*SFKRSI
Trigger: AATTGAACGCTTAAAGGAGCAGAGGGACAGAGATGA...CTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp GATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGCCAGAGAAGAAGCATaGTCTTTCAGATCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: DGRCRNGAGITLLQVSKLAREEA*SFRSKS
Trigger: ACTTTTGGATCTGAAAGAGCATGCTTCTTCTCTGGC...CAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp ATGACTGCTGTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATTGATTGAGTCGATCAACTTCTaGCTGGGCCTTGCTAGATTC +
Preference number: 4 (lower is better)
Translates to: MTAVVYATSLTMPIPSLIESINF*LGLARF
Trigger: GAATCTAGCAAGGCCCAGGCAGAAGTTGATCGACTC...AATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAACAGCAGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GCTACGTCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCTTCTGGTCTTTCACTTaGCTTTCCAACTCAGCTATC +
Preference number: 4 (lower is better)
Translates to: ATSLTMPIPSLICSLGVSFWSFT*LSNSAI
Trigger: GATAGCTGAGTTGGAAAGGCAAGTGAAAGACCAGAA...GCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGACGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp ACACACCTTAAGATCGGGGAGGGGAAGGACATGCTATTTACTGCTTCAACTCCACTTGTGCTTCAGATTTaGTACCTTCTTATTCTGGTC +
Preference number: 4 (lower is better)
Translates to: THLKIGEGKDMLFTASTPLVLQI*YLLILV
Trigger: GACCAGAATAAGAAGGTAGCAAATCTGAAGCACAAG...TGGAGTTGAAGCAGTAAATAGCATGTCCTTCCCCTCCCCGATCTTAAGGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AAGGCTGTTATCACACCGCAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTCACCATTTCCCGCTCTaGAGTTATCTGTACACTTTC +
Preference number: 4 (lower is better)
Translates to: KAVITPQFFTLWWIKRDAHHFPL*SYLYTF
Trigger: GAAAGTGTACAGATAACTGCAGAGCGGGAAATGGTG...AGCATCTCGCTTTATCCACCATAACGTAAAGAACTGCGGTGTGATAACAGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACATGGATTCTAGTTCCTaGTTTACCTTCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: LSTWFTGTAMNRIEVTDHMDSSS*FTFSMA
Trigger: GGCCATGGAGAAGGTAAAGCAGGAACTAGAATCCAT...GTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACAGTGTTTCCTTCTCTCTaGCCGAAGATTAGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: RFDPLSTLDIKKVSVETTVFPSL*PKISQV
Trigger: CACTTGACTAATCTTCGGGCAGAGAGAAGGAAACAC...TGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp CTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACAAACTCCTGCAGTTCTaGATTGTCCCGTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: LSTWFTGTAMNRIEVTDHKLLQF*IVPFTF
Trigger: AAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTT...GTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAAAACTCCTGCAGTTCTaGATTGTCCCGTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: AVLQRDSTLYLPWTSRRLKLLQF*IVPFTF
Trigger: AAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTT...TAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTGTCGGGACAATGGTCTaGTATCTGCTGAAGAATGGC +
Preference number: 4 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGVGTMV*YLLKNG
Trigger: GCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTGTTTGTAGTGTTTGGTaGCAAGAAGGTTCCGGGCAC +
Preference number: 4 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGVCSVW*QEGSGH
Trigger: GTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp CATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCATGTCAGGACATGCTATTTACTaGTTCAACTCCAGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: HPLSLLNSKSIPGFILMSGHAIY*FNSSRY
Trigger: ATACCTGCTGGAGTTGAAGCAGTAAATAGCATGTCC...TGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACAAAATTCCACGAGGTACATaGAGATGTCAGGAAATGGCC +
Preference number: 4 (lower is better)
Translates to: STWFTGTAMNRIEVTDHKIPRGT*RCQEMA
Trigger: GGCCATTTCCTGACATCTGCATGTACCTCGTGGAAT...TTTGTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TGCTATTTACTGCTTCAACTCCAGCAGGTATGTCTCACAGAATCCACTACATCTTATCGGTCCCGGAAATaGTTCTTCTCAGAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: CYLLLQLQQVCLTESTTSYRSRK*FFSEAV
Trigger: CACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATA...AGATGTAGTGGATTCTGTGAGACATACCTGCTGGAGTTGAAGCAGTAAATAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACTATCGGTCCCGGAAATaGTTCTTCTCAGAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: GVGHLVKCWFNDLDSMRHYRSRK*FFSEAV
Trigger: CACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATA...GTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCTCAGTAGCAGTTGTATaGCCATATGAAACCATGACC +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGSVAVV*PYETMT
Trigger: GGTCATGGTTTCATATGGGCATACAACTGCTACTGA...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGACATTGGTTTGGGGTaGAGATCTTTAGGTGCTAAA +
Preference number: 4 (lower is better)
Translates to: DGRCRNGAGITLLQVSKLDIGLG*RSLGAK
Trigger: TTTAGCACCTAAAGATCTGCACCCCAAACCAATGTC...CAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCGACATTGGTTTGGGGTaGAGATCTTTAGGTGCTAAA +
Preference number: 4 (lower is better)
Translates to: ERFDPLSTLDIKKVSVETDIGLG*RSLGAK
Trigger: TTTAGCACCTAAAGATCTGCACCCCAAACCAATGTC...GGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAAAGCCCAGGTTACCATaGAGTATTAGGCACACTGAG +
Preference number: 4 (lower is better)
Translates to: SSERFDPLSTLDIKKVSVKPRLP*SIRHTE
Trigger: CTCAGTGTGCCTAATACTGCATGGTAACCTGGGCTT...TACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTATTCTGGTCTTTCACTTaGCTTGAGGTGAGACTTTCC +
Preference number: 4 (lower is better)
Translates to: AVLQRDSTLYLPWTSRRLFWSFT*LEVRLS
Trigger: GGAAAGTCTCACCTCAAGGCAAGTGAAAGACCAGAA...TAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000546231.6
CDS-3UTR CCA 90 bp CATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCATGTCATGTGAGGTGTCTCTATaGCTACAAGTTGGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: HPLSLLNSKSIPGFILMSCEVSL*LQVGLR
Trigger: CCTTAAACCAACTTGTAGCCATAGAGACACCTCACA...TGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTGGGCACTTCCATACATaGTTGCAAGGTCAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGGHFHT*LQGQER
Trigger: CCTTTCCTGACCTTGCAACCATGTATGGAAGTGCCC...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp ATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGGCTGGATGTCCCTCCCGTACTGTTaGTTCGACGGTGACCCAAGC +
Preference number: 4 (lower is better)
Translates to: MYNFNLLLFWSSSKRGWMSLPYC*FDGDPS
Trigger: GCTTGGGTCACCGTCGAACCAACAGTACGGGAGGGA...CATCCAGCCCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTTGTACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACGTCATCTGCATGTGCTaGTTTTCCTCCTGTACAACT +
Preference number: 4 (lower is better)
Translates to: LSTWFTGTAMNRIEVTDHVICMC*FSSCTT
Trigger: AGTTGTACAGGAGGAAAACCAGCACATGCAGATGAC...GTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp ATGACTGCTGTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATTGATTCGTCTTGTTCTCTCATaGTCTTCCTCGGTAGCCTTG +
Preference number: 4 (lower is better)
Translates to: MTAVVYATSLTMPIPSLIRLVLS*SSSVAL
Trigger: CAAGGCTACCGAGGAAGACCATGAGAGAACAAGACG...AATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAACAGCAGTCAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACATCCGCAGAGCTTTTGTTTTaGCAGAATCAGGAGCATTCT +
Preference number: 4 (lower is better)
Translates to: FDPLSTLDIKKVSVETTSAELLF*QNQEHS
Trigger: AGAATGCTCCTGATTCTGCCAAAACAAAAGCTCTGC...GGATGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTTTACTATCTGAGAACTaGTTTGTGAGTGTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVLLSEN*FVSVSS
Trigger: GCTAGAAACACTCACAAACCAGTTCTCAGATAGTAA...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp CTAGGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTTTACTATCTGAGAACTaGTTTGTGAGTGTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: LGCRDNGLLSAEEWRWQTLLSEN*FVSVSS
Trigger: GCTAGAAACACTCACAAACCAGTTCTCAGATAGTAA...AGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
CDS-3UTR CCA 90 bp TGGCAGAGGGTTGTCAGGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGCACTCATCTCTGGACTaGCTCTGGCTTCCAATGCTG +
Preference number: 4 (lower is better)
Translates to: WQRVVRCPMYNFNLLLFWHSSLD*LWLPML
Trigger: CAGCATTGGAAGCCAGAGCCAGTCCAGAGATGAGTG...CCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACCTGACAACCCTCTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CCA 90 bp TGCTATTTACTGCTTCAACTCCAGCAGGTATGTCTCACAGAATCCACTACATCTCGATCAACTTCTGCCTaGGCCTTGCTAGATTCATCT +
Preference number: 4 (lower is better)
Translates to: CYLLLQLQQVCLTESTTSRSTSA*ALLDSS
Trigger: AGATGAATCTAGCAAGGCCCAGGCAGAAGTTGATCG...AGATGTAGTGGATTCTGTGAGACATACCTGCTGGAGTTGAAGCAGTAAATAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTCGATCAACTTCTGCCTaGGCCTTGCTAGATTCATCT +
Preference number: 4 (lower is better)
Translates to: SSSERFDPLSTLDIKKVSRSTSA*ALLDSS
Trigger: AGATGAATCTAGCAAGGCCCAGGCAGAAGTTGATCG...ACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGCTTTACCTTCTCCATaGCCATCAGTAACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVALPSP*PSVTPP
Trigger: TGGAGGAGTTACTGATGGCCATGGAGAAGGTAAAGC...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp CTAGGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTACAGCTTTGCTTTCATaGATTCTAGTTCCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: LGCRDNGLLSAEEWRWQTTALLS*ILVPAL
Trigger: TAAAGCAGGAACTAGAATCCATGAAAGCAAAGCTGT...AGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp AAAGCTGCAGGCGGGGACAACAGGGTCTCATATGTCAACTTTGTATGTTCTCTTACCCTTTATCTACCCTaGACATCAAGAAGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: KAAGGDNRVSYVNFVCSLTLYLP*TSRRLV
Trigger: CACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGT...AAGAGAACATACAAAGTTGACATATGAGACCCTGTTGTCCCCGCCTGCAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTACTGCTGATGACCAGGTaGCAGTTCTTCAGAGAGATT +
Preference number: 4 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVLLMTR*QFFREI
Trigger: AATCTCTCTGAAGAACTGCCACCTGGTCATCAGCAG...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTCTCCAAGTCCATTCCTaGTTTCATTCTCATGTCAGA +
Preference number: 4 (lower is better)
Translates to: RYVSQNPLHLSLTEKWPFLQVHS*FHSHVR
Trigger: TCTGACATGAGAATGAAACCAGGAATGGACTTGGAG...AAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CAGACAGATGATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGAACAAAGCATCTCATGTaGAAAGTAAGCAGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: QTDDIGPGNASSQKQCHRTKHLM*KVSRRD
Trigger: GTCTCTTCTGCTTACTTTCCACATGAGATGCTTTGT...TCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATCATCTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTACATCTTCTTGTTAACTaGCCGAGGAACAGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: SSERFDPLSTLDIKKVSVHLLVN*PRNRVR
Trigger: CCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATG...TACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp ATGACTGCTGTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATTGATTTCAAACAGGAGAGACTaGTGGAGAACACCTCACACC +
Preference number: 4 (lower is better)
Translates to: MTAVVYATSLTMPIPSLISNRRD*WRTPHT
Trigger: GGTGTGAGGTGTTCTCCACCAGTCTCTCCTGTTTGA...AATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAACAGCAGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCCAGCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGTTCTTTACGTTATGGTaGATAAAGCGAGATGCTAAC +
Preference number: 4 (lower is better)
Translates to: SSRYVSQNPLHLSLTEKWFFTLW*IKRDAN
Trigger: GTTAGCATCTCGCTTTATCCACCATAACGTAAAGAA...CCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CTTGGGGTCAGCTTTCTGATTTGCAACATGAAGCTGGCTGAATTCCACGAGGTACAGTTCTTTACGTTATaGTGGATAAAGCGAGATGCT +
Preference number: 4 (lower is better)
Translates to: LGVSFLICNMKLAEFHEVQFFTL*WIKRDA
Trigger: AGCATCTCGCTTTATCCACCATAACGTAAAGAACTG...TACCTCGTGGAATTCAGCCAGCTTCATGTTGCAAATCAGAAAGCTGACCCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACTGGGAGTGGGACATTTaGTTAAGTGTTGGTTCAATG +
Preference number: 4 (lower is better)
Translates to: TPQYDNVNSLKQERLVENWEWDI*LSVGSM
Trigger: CATTGAACCAACACTTAACCAAATGTCCCACTCCCA...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CTAACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGTGGGAGTGGGACATTTaGTTAAGTGTTGGTTCAATG +
Preference number: 4 (lower is better)
Translates to: LTPQYDNVNSLKQERLVEWEWDI*LSVGSM
Trigger: CATTGAACCAACACTTAACCAAATGTCCCACTCCCA...CTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCTTTCTGGTTACAAAACCCCGTTaGGATCACACCCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: SLTMPIPSLICSLGVSFLVTKPR*DHTHSS
Trigger: AGAAGAGTGGGTGTGATCCCAACGGGGTTTTGTAAC...CAGAAAGCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGCTATTTACTGCTTCAACTCCAGCAGGTATGTCTCACAGAATCCACTACATCTCCCGCAAGTTCCTCATaGAAAACCAGACTTCAATGG +
Preference number: 4 (lower is better)
Translates to: CYLLLQLQQVCLTESTTSPASSS*KTRLQW
Trigger: CCATTGAAGTCTGGTTTTCCATGAGGAACTTGCGGG...AGATGTAGTGGATTCTGTGAGACATACCTGCTGGAGTTGAAGCAGTAAATAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCAGATGTTAAATTACTaGTATTTGCTGACACAGGGT +
Preference number: 4 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVQMLNY*YLLTQG
Trigger: ACCCTGTGTCAGCAAATACCAGTAATTTAACATCTG...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTATGTATAGGAAAATCCTaGCACAACTGCGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVCIGKS*HNCEAL
Trigger: CAGAGCCTCGCAGTTGTGCCAGGATTTTCCTATACA...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTAGTTCTAAGAGGGGCTaGATGATCGTTCTGAACAAA +
Preference number: 4 (lower is better)
Translates to: RYVSQNPLHLSLTEKWPFSSKRG*MIVLNK
Trigger: TTTGTTCAGAACGATCATCCAGCCCCTCTTAGAACT...AAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347735.10
ENST00000440394.7
CDS-3UTR CCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGAGTTCTAAGAGGGGCTaGATGATCGTTCTGAACAAA +
Preference number: 4 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVSSKRG*MIVLNK
Trigger: TTTGTTCAGAACGATCATCCAGCCCCTCTTAGAACT...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
3UTR CAA 72 bp GTCTACGCTACGTCCTTAACAATGCCAATACCTTCATaGATTTGCAGTCTTGGGGTCAGCTTTCTGATTTGC +
Preference number: 4 (lower is better)
Translates to: VYATSLTMPIPS*ICSLGVSFLIC
Trigger: GCAAATCAGAAAGCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATCCCAGCTGTCCAATCTTaGAGAAGTATCTTACACCAT +
Preference number: 4 (lower is better)
Translates to: KAPIVILEHSALWSIGGIPAVQS*RSILHH
Trigger: ATGGTGTAAGATACTTCTTCAAGATTGGACAGCTGG...GATGCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp CCTAGTGTGATGGGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACAGGTCAGGAAAGGTGTaGGCAGAAAATCAACAACAA +
Preference number: 4 (lower is better)
Translates to: PSVMGVGHLVKCWFNDLDRSGKV*AENQQQ
Trigger: TTGTTGTTGATTTTCTGCTCACACCTTTCCTGACCT...GTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCCCATCACACTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATCGCTTTTAGGTGTTTCTaGACCCACATTTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: KAPIVILEHSALWSIGGIAFRCF*THIFMV
Trigger: GACCATGAAAATGTGGGTTCAGAAACACCTAAAAGC...GATGCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp TTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTGCTTTTAGGTGTTTCTaGACCCACATTTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: FQCWELSTWFTGTAMNRIAFRCF*THIFMV
Trigger: GACCATGAAAATGTGGGTTCAGAAACACCTAAAAGC...AATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AAGGCTGTTATCACACCGCAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTTTCGATTTCAGCATCTaGATTTCCTCTTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: KAVITPQFFTLWWIKRDAFDFSI*ISSSRS
Trigger: AGACCTGGAAGAGGAAATTCAGATGCTGAAATCGAA...AGCATCTCGCTTTATCCACCATAACGTAAAGAACTGCGGTGTGATAACAGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGCTGTTTACTATCTaGGAACTGGTTTGTGAGTGT +
Preference number: 4 (lower is better)
Translates to: AVLQRDSTLYLPWTSRRLVLFTI*ELVCEC
Trigger: ACACTCACAAACCAGTTCTCAGATAGTAAACAGCAC...TAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp ATGACTGCTGTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATTGATTCATCCAACATGTCCTTaGGGTCATGTATCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: MTAVVYATSLTMPIPSLIHPTCP*GHVSLQ
Trigger: CTGGAGAGATACATGACCTCAAGGACATGTTGGATG...AATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAACAGCAGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp ACACACCTTAAGATCGGGGAGGGGAAGGACATGCTATTTACTGCTTCAACTCCATTTTCAATCTTCTTCTaGAGAACATTAACCTTCCGC +
Preference number: 4 (lower is better)
Translates to: THLKIGEGKDMLFTASTPFSIFF*RTLTFR
Trigger: GCGGAAGGTTAATGTTCTTCAGAAGAAGATTGAAAA...TGGAGTTGAAGCAGTAAATAGCATGTCCTTCCCCTCCCCGATCTTAAGGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTTTCAATCTTCTTCTaGAGAACATTAACCTTCCGC +
Preference number: 4 (lower is better)
Translates to: AERQSKMADVETVLESHFFSIFF*RTLTFR
Trigger: GCGGAAGGTTAATGTTCTTCAGAAGAAGATTGAAAA...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp GCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTACGAAGATTAGTCAAGTaGGTTTCCTTTTCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: AVLQRDSTLYLPWTSRRLRRLVK*VSFSAR
Trigger: TCTGGCAGAAAAGGAAACTCACTTGACTAATCTTCG...TAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp AAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATCCGAAGATTAGTCAAGTaGGTTTCCTTTTCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: KAPIVILEHSALWSIGGIRRLVK*VSFSAR
Trigger: TCTGGCAGAAAAGGAAACTCACTTGACTAATCTTCG...GATGCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp CTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACTCACACTTCTTCAAGTaGGCAAGTTGGGATGAAGTT +
Preference number: 4 (lower is better)
Translates to: LSTWFTGTAMNRIEVTDHSHFFK*ASWDEV
Trigger: AACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGA...GTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACTCTGAAAGCTACACATCTCTCCCTCACTaGGAAGTGGCCTTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: LVKCWFNDLDSMRHSESYTSLPH*EVAFSR
Trigger: CCTTGAAAAGGCCACTTCTCAGTGAGGGAGAGATGT...GTAGCTTTCAGAGTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AAGGCTGTTATCACACCGCAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTAGACCCCCAAACTCATaGATTCCATTAGGGAACTTT +
Preference number: 4 (lower is better)
Translates to: KAVITPQFFTLWWIKRDARPPNS*IPLGNF
Trigger: AAAGTTCCCTAATGGAATTCATGAGTTTGGGGGTCT...AGCATCTCGCTTTATCCACCATAACGTAAAGAACTGCGGTGTGATAACAGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACCTGCCTAATTATTTATaGCTGCTGTTGTCTACGCTA +
Preference number: 4 (lower is better)
Translates to: TPQYDNVNSLKQERLVENLPNYL*LLLSTL
Trigger: TAGCGTAGACAACAGCAGTCATAAATAATTAGGCAG...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTACTCAATGAGACACTCTaGAAGCTACAAACTGCATCC +
Preference number: 4 (lower is better)
Translates to: SSERFDPLSTLDIKKVSVLNETL*KLQTAS
Trigger: GGATGCAGTTTGTAGCTTTCAGAGTGTCTCATTGAG...TACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATCAGGTATATGAAAAGATaGGAAGCTCACACTGGGCTT +
Preference number: 4 (lower is better)
Translates to: KAPIVILEHSALWSIGGIRYMKR*EAHTGL
Trigger: AAGCCCAGTGTGAGCTTCTCATCTTTTCATATACCT...GATGCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTTCTACCCAGAGGTCCTaGACATGTATAGGAAAATCC +
Preference number: 4 (lower is better)
Translates to: SSSERFDPLSTLDIKKVSSTQRS*TCIGKS
Trigger: GGATTTTCCTATACATGTTCAGGACCTCTGGGTAGA...ACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTGCTGAACTAAGCCTCTaGTTGGCTATGCCCATATAC +
Preference number: 4 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGAELSL*LAMPIY
Trigger: GTATATGGGCATAGCCAATCAGAGGCTTAGTTCAGC...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp TCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCTTTCTGGTGATGCTCTCCAAATaGTATGGTGTCACTAGCAAC +
Preference number: 4 (lower is better)
Translates to: SLTMPIPSLICSLGVSFLVMLSK*YGVTSN
Trigger: GTTGCTAGTGACACCATAGCATTTGGAGAGCATCAC...CAGAAAGCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp ATGAGACACTCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGTTGAAGAACTCAATTTaGTCTCCTTTACTTCCACAT +
Preference number: 4 (lower is better)
Translates to: MRHSESYKLHPLCPTARRLKNSI*SPLLPH
Trigger: ATGTGGAAGTAAAGGAGAGCAAATTGAGTTCTTCAA...CCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGAGTGTCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTTGAAGAACTCAATTTaGTCTCCTTTACTTCCACAT +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSLKNSI*SPLLPH
Trigger: ATGTGGAAGTAAAGGAGAGCAAATTGAGTTCTTCAA...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp AAGGCTGTTATCACACCGCAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTTGGCAGAAAGTCCTTTaGTCTGCAACATTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: KAVITPQFFTLWWIKRDAWQKVL*SATFPE
Trigger: TTCTGGAAATGTTGCAGAGCAAAGGACTTTCTGCCA...AGCATCTCGCTTTATCCACCATAACGTAAAGAACTGCGGTGTGATAACAGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TGGCAGAGGGTTGTCAGGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGATGAACGTGCATCTCTaGCTCTGCCAGTCGTCTTGT +
Preference number: 4 (lower is better)
Translates to: WQRVVRCPMYNFNLLLFWMNVHL*LCQSSC
Trigger: ACAAGACGACTGGCAGAGGCAGAGATGCACGTTCAT...CCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACCTGACAACCCTCTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
CDS-3UTR GCA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTGTTTCTAGCTTTGTCTaGAGGGCGAGTAGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGVSSFV*RASSSV
Trigger: CACAGAACTACTCGCCCTGCAGACAAAGCTAGAAAC...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp ATGACTGCTGTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATTGATTTCTGAAAGGTCGCCTTaGAACAGGCTGACTTTTTCC +
Preference number: 4 (lower is better)
Translates to: MTAVVYATSLTMPIPSLISERSP*NRLTFS
Trigger: GGAAAAAGTCAGCCTGTTGCAAGGCGACCTTTCAGA...AATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAACAGCAGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACAGCCAGAGAAGAAGCATaGTCTTTCAGATCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: RFDPLSTLDIKKVSVETTAREEA*SFRSKS
Trigger: ACTTTTGGATCTGAAAGAGCATGCTTCTTCTCTGGC...TGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp AAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATCGCCAGAGAAGAAGCATaGTCTTTCAGATCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: KAPIVILEHSALWSIGGIAREEA*SFRSKS
Trigger: ACTTTTGGATCTGAAAGAGCATGCTTCTTCTCTGGC...GATGCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp TCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACAAATCTGGCTTCCAATGCTaGCTCATGTGCCTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: STWFTGTAMNRIEVTDHKSGFQC*LMCLFQ
Trigger: TTGAAAAAGGCACATGAGGCAGCATTGGAAGCCAGA...TTTGTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGCTTGTGCTTCAGATTTaGTACCTTCTTATTCTGGTC +
Preference number: 4 (lower is better)
Translates to: DGRCRNGAGITLLQVSKLLVLQI*YLLILV
Trigger: GACCAGAATAAGAAGGTAGCAAATCTGAAGCACAAG...CAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp GAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCCTTGTGCTTCAGATTTaGTACCTTCTTATTCTGGTC +
Preference number: 4 (lower is better)
Translates to: ERFDPLSTLDIKKVSVETLVLQI*YLLILV
Trigger: GACCAGAATAAGAAGGTAGCAAATCTGAAGCACAAG...GGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp AGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGCTTGTGCTTCAGATTTaGTACCTTCTTATTCTGGTC +
Preference number: 4 (lower is better)
Translates to: RQSKMADVETVLESHFFKLVLQI*YLLILV
Trigger: GACCAGAATAAGAAGGTAGCAAATCTGAAGCACAAG...CTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR GCA 90 bp TTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACTCTGAAAGCTACGTGAGTTTCCTTTTCTaGCAGAGACTGCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LVKCWFNDLDSMRHSESYVSFLF*QRLLGG
Trigger: TCCACCCAGCAGTCTCTGGCAGAAAAGGAAACTCAC...GTAGCTTTCAGAGTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TGCTATTTACTGCTTCAACTCCAGCAGGTATGTCTCACAGAATCCACTACATCTGTGTTTCCTTCTCTCTaGCCGAAGATTAGTCAAGTG +
Preference number: 4 (lower is better)
Translates to: CYLLLQLQQVCLTESTTSVFPSL*PKISQV
Trigger: CACTTGACTAATCTTCGGGCAGAGAGAAGGAAACAC...AGATGTAGTGGATTCTGTGAGACATACCTGCTGGAGTTGAAGCAGTAAATAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TGGCAGAGGGTTGTCAGGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGGTCTGCTGCTTAAGCTaGTGTACCAGACGATCCTTC +
Preference number: 4 (lower is better)
Translates to: WQRVVRCPMYNFNLLLFWVCCLS*CTRRSF
Trigger: GAAGGATCGTCTGGTACAGCAGCTTAAGCAGCAGAC...CCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACCTGACAACCCTCTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTCGATTTTGCGTCTGCTaGTTAAGCTGCTGTACCAGA +
Preference number: 4 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFRFCVC*LSCCTR
Trigger: TCTGGTACAGCAGCTTAAGCAGCAGACGCAAAATCG...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTCGATTTTGCGTCTGCTaGTTAAGCTGCTGTACCAGA +
Preference number: 4 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGRFCVC*LSCCTR
Trigger: TCTGGTACAGCAGCTTAAGCAGCAGACGCAAAATCG...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp CTTGGGGTCAGCTTTCTGATTTGCAACATGAAGCTGGCTGAATTCCACGAGGTACTAATTATTTATGACTaGTGTTGTCTACGCTACGTC +
Preference number: 4 (lower is better)
Translates to: LGVSFLICNMKLAEFHEVLIIYD*CCLRYV
Trigger: GACGTAGCGTAGACAACAGCAGTCATAAATAATTAG...TACCTCGTGGAATTCAGCCAGCTTCATGTTGCAAATCAGAAAGCTGACCCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTCAAGAAGATTCCTTaGTGTTCACAGAGACCAGAC +
Preference number: 4 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVVKKIP*CSQRPD
Trigger: GTCTGGTCTCTGTGAACAGCAAGGAATCTTCTTGAC...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACACCCACTCTTCTTCGTaGCCTCTTTATGGTGACATT +
Preference number: 4 (lower is better)
Translates to: GVGHLVKCWFNDLDSMRHTHSSS*PLYGDI
Trigger: AATGTCACCATAAAGAGGGCACGAAGAAGAGTGGGT...GTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CTAACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAATTCTTCCCTAATTTaGATGGGGGAAACTCCAGAT +
Preference number: 4 (lower is better)
Translates to: LTPQYDNVNSLKQERLVENSSLI*MGETPD
Trigger: ATCTGGAGTTTCCCCCATGCAAATTAGGGAAGAATT...CTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTAAGCCCAGGTTACCATaGAGTATTAGGCACACTGAG +
Preference number: 4 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGKPRLP*SIRHTE
Trigger: CTCAGTGTGCCTAATACTGCATGGTAACCTGGGCTT...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTCACCACCATGGAGGCTaGTACTGTTACCAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFHHHGG*YCYQKE
Trigger: TTCCTTTTGGTAACAGTAGCAGCCTCCATGGTGGTG...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTCTATGGCTACAAGTTaGTTTAAGGTTAATCAGAAG +
Preference number: 4 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSSMATS*FKVNQK
Trigger: CTTCTGATTAACCTTAAACCAACTTGTAGCCATAGA...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp AAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATCTGTGAGGTGTCTCTATaGCTACAAGTTGGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: KAPIVILEHSALWSIGGICEVSL*LQVGLR
Trigger: CCTTAAACCAACTTGTAGCCATAGAGACACCTCACA...GATGCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp GCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGCAGAGCTTTTGTTTTaGCAGAATCAGGAGCATTCT +
Preference number: 4 (lower is better)
Translates to: AVLQRDSTLYLPWTSRRLAELLF*QNQEHS
Trigger: AGAATGCTCCTGATTCTGCCAAAACAAAAGCTCTGC...TAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp GTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGACTCTACAGACTTTAAATTCTTTACTATCTGAGAACTaGTTTGTGAGTGTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: VGSSWTDGAVLTLQTLNSLLSEN*FVSVSS
Trigger: GCTAGAAACACTCACAAACCAGTTCTCAGATAGTAA...AGAATTTAAAGTCTGTAGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCTTTCTGTTTCAGCATTGGTCCTaGCTGATTCCTCTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: SLTMPIPSLICSLGVSFLFQHWS*LIPLVL
Trigger: TAGCACAAGAGGAATCAGCCAGGACCAATGCTGAAA...CAGAAAGCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGACTCTACAGACTTTAAATTCTACAGCTTTGCTTTCATaGATTCTAGTTCCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: VGSSWTDGAVLTLQTLNSTALLS*ILVPAL
Trigger: TAAAGCAGGAACTAGAATCCATGAAAGCAAAGCTGT...AGAATTTAAAGTCTGTAGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GGTGGCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGACAGCTTTGCTTTCATaGATTCTAGTTCCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: GGSSSERFDPLSTLDIKKTALLS*ILVPAL
Trigger: TAAAGCAGGAACTAGAATCCATGAAAGCAAAGCTGT...CTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGCCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp TGGCAGAGGGTTGTCAGGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGCAAGTTATAGGAAGCTaGTGGAGTGAGTCCACGGAG +
Preference number: 4 (lower is better)
Translates to: WQRVVRCPMYNFNLLLFWQVIGS*WSESTE
Trigger: CTCCGTGGACTCACTCCACCAGCTTCCTATAACTTG...CCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACCTGACAACCCTCTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp CAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTAACACTCCTGCCTTTCAGACCCTTTATCTACCCTaGACATCAAGAAGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: QFFTLWWIKRDANTPAFQTLYLP*TSRRLV
Trigger: CACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGT...CTGAAAGGCAGGAGTGTTAGCATCTCGCTTTATCCACCATAACGTAAAGAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTAACACTCCTGCCTTTCAGCTCCAAGTCCATTCCTaGTTTCATTCTCATGTCAGA +
Preference number: 4 (lower is better)
Translates to: QFFTLWWIKRDANTPAFQLQVHS*FHSHVR
Trigger: TCTGACATGAGAATGAAACCAGGAATGGACTTGGAG...CTGAAAGGCAGGAGTGTTAGCATCTCGCTTTATCCACCATAACGTAAAGAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AAAGCTGCAGGCGGGGACAACAGGGTCTCATATGTCAACTTTGTATGTTCTCTTACAAAGCATCTCATGTaGAAAGTAAGCAGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: KAAGGDNRVSYVNFVCSLTKHLM*KVSRRD
Trigger: GTCTCTTCTGCTTACTTTCCACATGAGATGCTTTGT...AAGAGAACATACAAAGTTGACATATGAGACCCTGTTGTCCCCGCCTGCAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACACAAAGCATCTCATGTaGAAAGTAAGCAGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: TPQYDNVNSLKQERLVENTKHLM*KVSRRD
Trigger: GTCTCTTCTGCTTACTTTCCACATGAGATGCTTTGT...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTCATCTTCTTGTTAACTaGCCGAGGAACAGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFHLLVN*PRNRVR
Trigger: CCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATG...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTCATCTTCTTGTTAACTaGCCGAGGAACAGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGHLLVN*PRNRVR
Trigger: CCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATG...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATTGATTTGCAGTCTTaGGGTCAGCTTTCTGATTTG +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGIDLQS*GQLSDL
Trigger: CAAATCAGAAAGCTGACCCCAAGACTGCAAATCAAT...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGCAGTTCTTTACGTTATaGTGGATAAAGCGAGATGCT +
Preference number: 4 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVQFFTL*WIKRDA
Trigger: AGCATCTCGCTTTATCCACCATAACGTAAAGAACTG...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGCATTTGGTTAAGTGTTaGTTCAATGATCTAGACTCA +
Preference number: 4 (lower is better)
Translates to: EMLTLLPFSAGSFLHGLRHLVKC*FNDLDS
Trigger: TGAGTCTAGATCATTGAACCAACACTTAACCAAATG...CCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACTCTGAAAGCTACAGACATTCCTTTGAGTaGTTCACGTCCCCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: LVKCWFNDLDSMRHSESYRHSFE*FTSPPE
Trigger: CTCAGGAGGGGACGTGAACCACTCAAAGGAATGTCT...GTAGCTTTCAGAGTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGAAGCATCTCAGTAAGAGGTTTATGAGCAGAGTCCATTTAACCTTCGATAAGTGTATAGGAAAATCCTaGCACAACTGCGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RKHLSKRFMSRVHLTFDKCIGKS*HNCEAL
Trigger: CAGAGCCTCGCAGTTGTGCCAGGATTTTCCTATACA...CTTATCGAAGGTTAAATGGACTCTGCTCATAAACCTCTTACTGAGATGCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTTGTAGCTGCAGTAGATaGATGCAATACTGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGCSCSR*MQYWRG
Trigger: ACCACGCCAGTATTGCATCCATCTACTGCAGCTACA...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACACCAGCTCCTGTTTCACCTaGCCAATCTTATTTTTCATA +
Preference number: 4 (lower is better)
Translates to: PQYDNVNSLKQERLVENTSSCFT*PILFFI
Trigger: TATGAAAAATAAGATTGGCCAGGTGAAACAGGAGCT...GGTGTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
CDS-3UTR CCA 90 bp CAGACAGATGATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGAAGCTCCTGTTTCACCTaGCCAATCTTATTTTTCATA +
Preference number: 4 (lower is better)
Translates to: QTDDIGPGNASSQKQCHRSSCFT*PILFFI
Trigger: TATGAAAAATAAGATTGGCCAGGTGAAACAGGAGCT...TCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATCATCTGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
3UTR CAA 72 bp CGCTACGTCCTTAACAATGCCAATACCTTCATTGATTaGCAGTCTTGGGGTCAGCTTTCTGATTTGCAACAT +
Preference number: 4 (lower is better)
Translates to: RYVLNNANTFID*QSWGQLSDLQH
Trigger: ATGTTGCAAATCAGAAAGCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
3UTR CAA 72 bp GGAATGACAAGTCCTAGTGTGATGGGAGTGGGACATTaGGTTAAGTGTTGGTTCAATGATCTAGACTCAATG +
Preference number: 4 (lower is better)
Translates to: GMTSPSVMGVGH*VKCWFNDLDSM
Trigger: CATTGAGTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCCCATCACACTAGGACTTGTCATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGGCTGGATGATCGTTCTCACAGGAGGGAGGTaGTGCTCTCCAAATGCTATG +
Preference number: 4 (lower is better)
Translates to: NFNLLLFWSSSKRGWMIVLTGGR*CSPNAM
Trigger: CATAGCATTTGGAGAGCATCACCTCCCTCCTGTGAG...AACGATCATCCAGCCCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCCTTGATGCTATTCATTaGAGAACTCAATTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGLDAIH*RTQFAL
Trigger: GAGAGCAAATTGAGTTCTTCAATGAATAGCATCAAG...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp TTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACATCCCTTGATGCTATTCATTaGAGAACTCAATTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: FDPLSTLDIKKVSVETTSLDAIH*RTQFAL
Trigger: GAGAGCAAATTGAGTTCTTCAATGAATAGCATCAAG...GGATGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp ATTTATGCTAGAAGAAGGTTCCAGGCAATGCACGAGGCTGAGGTTCAGAGAAGACTTGATGCTATTCATTaGAGAACTCAATTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: IYARRRFQAMHEAEVQRRLDAIH*RTQFAL
Trigger: GAGAGCAAATTGAGTTCTTCAATGAATAGCATCAAG...TCTTCTCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTCTTCTAGCATAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGCTCCAGAAGGTCTTaGTGCTATTCATTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFGSRRS*CYSLKN
Trigger: GTTCTTCAATGAATAGCATCAAGACCTTCTGGAGCC...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTGGCTCCAGAAGGTCTTaGTGCTATTCATTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGGSRRS*CYSLKN
Trigger: GTTCTTCAATGAATAGCATCAAGACCTTCTGGAGCC...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCTTTTCAATCTTCTTCTaGAGAACATTAACCTTCCGC +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGFSIFF*RTLTFR
Trigger: GCGGAAGGTTAATGTTCTTCAGAAGAAGATTGAAAA...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR TCA 90 bp AACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGGCTGGATGATCGTTCAGCCTGCAAGGATTTaGCCCGTTCTTTCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: NFNLLLFWSSSKRGWMIVQPARI*PVLSSC
Trigger: GCAGCTTGAAAGAACGGGTCAAATCCTTGCAGGCTG...AACGATCATCCAGCCCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp TCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTACGAAGATTAGTCAAGTaGGTTTCCTTTTCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: SSERFDPLSTLDIKKVSVRRLVK*VSFSAR
Trigger: TCTGGCAGAAAAGGAAACTCACTTGACTAATCTTCG...TACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR TCA 90 bp GGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGACTCTTCCAGGGCGTTaGCCACTTGCTCTAGGATGT +
Preference number: 4 (lower is better)
Translates to: GVQCTTLIYFYFGQVLRGTLPGR*PLALGC
Trigger: ACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGT...CCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTACTGCCTAATTATTTATaGCTGCTGTTGTCTACGCTA +
Preference number: 4 (lower is better)
Translates to: AVLQRDSTLYLPWTSRRLLPNYL*LLLSTL
Trigger: TAGCGTAGACAACAGCAGTCATAAATAATTAGGCAG...TAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp ATGACTGCTGTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATTGATTTCATCAATGATTCAATaGGTACCGGGGGTTAGAGGT +
Preference number: 4 (lower is better)
Translates to: MTAVVYATSLTMPIPSLISSMIQ*VPGVRG
Trigger: ACCTCTAACCCCCGGTACTCATTGAATCATTGATGA...AATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAACAGCAGTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACTCTGAAAGCTACTCTAAAACCCAAGTGTaGGGAAGTCTGAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: LVKCWFNDLDSMRHSESYSKTQV*GSLRAT
Trigger: TGTGGCTCTCAGACTTCCTCACACTTGGGTTTTAGA...GTAGCTTTCAGAGTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp CCTAGTGTGATGGGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACATTTATATTTTGGGGTaGCACATGATGGTTGCCTCA +
Preference number: 4 (lower is better)
Translates to: PSVMGVGHLVKCWFNDLDIYILG*HMMVAS
Trigger: TGAGGCAACCATCATGTGTCACCCCAAAATATAAAT...GTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCCCATCACACTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTGAAGAACTCAATTTaGTCTCCTTTACTTCCACAT +
Preference number: 4 (lower is better)
Translates to: AERQSKMADVETVLESHFLKNSI*SPLLPH
Trigger: ATGTGGAAGTAAAGGAGAGCAAATTGAGTTCTTCAA...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp GGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACTGGCAGAAAGTCCTTTaGTCTGCAACATTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GVGHLVKCWFNDLDSMRHWQKVL*SATFPE
Trigger: TTCTGGAAATGTTGCAGAGCAAAGGACTTTCTGCCA...GTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATCTTCTCAAACCTTCGATaGATCTCCTCTCTCAACATA +
Preference number: 4 (lower is better)
Translates to: KAPIVILEHSALWSIGGIFSNLR*ISSLNI
Trigger: TATGTTGAGAGAGGAGATGCATCGAAGGTTTGAGAA...GATGCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp AGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACATTCTCAAACCTTCGATaGATCTCCTCTCTCAACATA +
Preference number: 4 (lower is better)
Translates to: RFDPLSTLDIKKVSVETTFSNLR*ISSLNI
Trigger: TATGTTGAGAGAGGAGATGCATCGAAGGTTTGAGAA...TGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp TTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACTCTGAAAGCTACTCTGAAAGGTCGCCTTaGAACAGGCTGACTTTTTCC +
Preference number: 4 (lower is better)
Translates to: LVKCWFNDLDSMRHSESYSERSP*NRLTFS
Trigger: GGAAAAAGTCAGCCTGTTGCAAGGCGACCTTTCAGA...GTAGCTTTCAGAGTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCTTTCTGGCCAGAGAAGAAGCATaGTCTTTCAGATCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: SLTMPIPSLICSLGVSFLAREEA*SFRSKS
Trigger: ACTTTTGGATCTGAAAGAGCATGCTTCTTCTCTGGC...CAGAAAGCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTTCTGGCTTCCAATGCTaGCTCATGTGCCTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFSGFQC*LMCLFQ
Trigger: TTGAAAAAGGCACATGAGGCAGCATTGGAAGCCAGA...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR GCA 90 bp ATGACTGCTGTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATTGATTAAACTCCTGCAGTTCTaGATTGTCCCGTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: MTAVVYATSLTMPIPSLIKLLQF*IVPFTF
Trigger: AAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTT...AATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAACAGCAGTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACCTAATTATTTATGACTaGTGTTGTCTACGCTACGTC +
Preference number: 4 (lower is better)
Translates to: TPQYDNVNSLKQERLVENLIIYD*CCLRYV
Trigger: GACGTAGCGTAGACAACAGCAGTCATAAATAATTAG...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp ATGACTGCTGTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATTGATTGTCAAGAAGATTCCTTaGTGTTCACAGAGACCAGAC +
Preference number: 4 (lower is better)
Translates to: MTAVVYATSLTMPIPSLIVKKIP*CSQRPD
Trigger: GTCTGGTCTCTGTGAACAGCAAGGAATCTTCTTGAC...AATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAACAGCAGTCAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTATCAGTAGCAGTTGTATaGCCATATGAAACCATGACC +
Preference number: 4 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVSVAVV*PYETMT
Trigger: GGTCATGGTTTCATATGGGCATACAACTGCTACTGA...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATCAAATTAAGGGCAACCTaGACTGAGTTTTCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: KAPIVILEHSALWSIGGIKLRAT*TEFSRL
Trigger: TAGCCTTGAAAACTCAGTGCAGGTTGCCCTTAATTT...GATGCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCTAGTGTGATGGGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACAATTCTTCCCTAATTTaGATGGGGGAAACTCCAGAT +
Preference number: 4 (lower is better)
Translates to: PSVMGVGHLVKCWFNDLDNSSLI*MGETPD
Trigger: ATCTGGAGTTTCCCCCATGCAAATTAGGGAAGAATT...GTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCCCATCACACTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTTTCTGGTCTTTCACTTaGCTTGAGGTGAGACTTTCC +
Preference number: 4 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFFWSFT*LEVRLS
Trigger: GGAAAGTCTCACCTCAAGGCAAGTGAAAGACCAGAA...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000546231.6
ENST00000611180.4
CDS-3UTR GCA 90 bp AACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGGCTGGATGATCGTTGCCTCTGATTGGCTATaGCCATATACCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: NFNLLLFWSSSKRGWMIVASDWL*PYTLLL
Trigger: GAGGAGGAGGGTATATGGGCATAGCCAATCAGAGGC...AACGATCATCCAGCCCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp AGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTTGTGAGGTGTCTCTATaGCTACAAGTTGGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: SSSERFDPLSTLDIKKVSCEVSL*LQVGLR
Trigger: CCTTAAACCAACTTGTAGCCATAGAGACACCTCACA...ACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp ATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGGCTGGATGGGGAGTGAGGTACAGTaGATGCCATACTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: MYNFNLLLFWSSSKRGWMGSEVQ*MPYSQE
Trigger: CTCCTGTGAGTATGGCATCCACTGTACCTCACTCCC...CATCCAGCCCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTTGTACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CCA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTGTCATCTGCATGTGCTaGTTTTCCTCCTGTACAACT +
Preference number: 4 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGVICMC*FSSCTT
Trigger: AGTTGTACAGGAGGAAAACCAGCACATGCAGATGAC...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp GGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACGCAGAGCTTTTGTTTTaGCAGAATCAGGAGCATTCT +
Preference number: 4 (lower is better)
Translates to: GVGHLVKCWFNDLDSMRHAELLF*QNQEHS
Trigger: AGAATGCTCCTGATTCTGCCAAAACAAAAGCTCTGC...GTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGTCGGTCACTCATCTCTaGACTGGCTCTGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: GVQCTTLIYFYFGQVLRGSVTHL*TGSGFQ
Trigger: TTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACCGA...CCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CCA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTCCTGTTTTTCAGCATTaGTCCTGGCTGATTCCTCTT +
Preference number: 4 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFPVFQH*SWLIPL
Trigger: AAGAGGAATCAGCCAGGACCAATGCTGAAAAACAGG...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCACAGCTTTGCTTTCATaGATTCTAGTTCCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGTALLS*ILVPAL
Trigger: TAAAGCAGGAACTAGAATCCATGAAAGCAAAGCTGT...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTACAGCTTTGCTTTCATaGATTCTAGTTCCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: RYVSQNPLHLSLTEKWPFTALLS*ILVPAL
Trigger: TAAAGCAGGAACTAGAATCCATGAAAGCAAAGCTGT...AAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp ATTTATGCTAGAAGAAGGTTCCAGGCAATGCACGAGGCTGAGGTTCAGAGAAGAACAGCTTTGCTTTCATaGATTCTAGTTCCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: IYARRRFQAMHEAEVQRRTALLS*ILVPAL
Trigger: TAAAGCAGGAACTAGAATCCATGAAAGCAAAGCTGT...TCTTCTCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTCTTCTAGCATAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGCTATTTACTGCTTCAACTCCAGCAGGTATGTCTCACAGAATCCACTACATCTACCCTTTATCTACCCTaGACATCAAGAAGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: CYLLLQLQQVCLTESTTSTLYLP*TSRRLV
Trigger: CACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGT...AGATGTAGTGGATTCTGTGAGACATACCTGCTGGAGTTGAAGCAGTAAATAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTACTCCAAGTCCATTCCTaGTTTCATTCTCATGTCAGA +
Preference number: 4 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVLQVHS*FHSHVR
Trigger: TCTGACATGAGAATGAAACCAGGAATGGACTTGGAG...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp AGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTCTCCAAGTCCATTCCTaGTTTCATTCTCATGTCAGA +
Preference number: 4 (lower is better)
Translates to: SSSERFDPLSTLDIKKVSLQVHS*FHSHVR
Trigger: TCTGACATGAGAATGAAACCAGGAATGGACTTGGAG...ACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp GGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGGAACACTCAGCTCTCTaGTCCATTGGAGGCATCCTC +
Preference number: 4 (lower is better)
Translates to: GVQCTTLIYFYFGQVLRGEHSAL*SIGGIL
Trigger: GAGGATGCCTCCAATGGACCAGAGAGCTGAGTGTTC...CCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000588412.5
CDS-3UTR CCA 90 bp CAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTAACACTCCTGCCTTTCAGACAAAGCATCTCATGTaGAAAGTAAGCAGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: QFFTLWWIKRDANTPAFQTKHLM*KVSRRD
Trigger: GTCTCTTCTGCTTACTTTCCACATGAGATGCTTTGT...CTGAAAGGCAGGAGTGTTAGCATCTCGCTTTATCCACCATAACGTAAAGAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAATTGATTTGCAGTCTTaGGGTCAGCTTTCTGATTTG +
Preference number: 4 (lower is better)
Translates to: AVLQRDSTLYLPWTSRRLIDLQS*GQLSDL
Trigger: CAAATCAGAAAGCTGACCCCAAGACTGCAAATCAAT...TAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTTCTTTACGTTATGGTaGATAAAGCGAGATGCTAAC +
Preference number: 4 (lower is better)
Translates to: RQSKMADVETVLESHFFKFFTLW*IKRDAN
Trigger: GTTAGCATCTCGCTTTATCCACCATAACGTAAAGAA...CTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTAACACTCCTGCCTTTCAGCAGTTCTTTACGTTATaGTGGATAAAGCGAGATGCT +
Preference number: 4 (lower is better)
Translates to: QFFTLWWIKRDANTPAFQQFFTL*WIKRDA
Trigger: AGCATCTCGCTTTATCCACCATAACGTAAAGAACTG...CTGAAAGGCAGGAGTGTTAGCATCTCGCTTTATCCACCATAACGTAAAGAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATCCAGTTCTTTACGTTATaGTGGATAAAGCGAGATGCT +
Preference number: 4 (lower is better)
Translates to: KAPIVILEHSALWSIGGIQFFTL*WIKRDA
Trigger: AGCATCTCGCTTTATCCACCATAACGTAAAGAACTG...GATGCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCCAGATGTTAAATTACTaGTATTTGCTGACACAGGGT +
Preference number: 4 (lower is better)
Translates to: EKAPIVILEHSALWSIGGQMLNY*YLLTQG
Trigger: ACCCTGTGTCAGCAAATACCAGTAATTTAACATCTG...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp GGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGCTCCTCATCCTGGTCTaGGGAGGGCTTGTGATTTGT +
Preference number: 4 (lower is better)
Translates to: GVQCTTLIYFYFGQVLRGLLILV*GGLVIC
Trigger: ACAAATCACAAGCCCTCCCCAGACCAGGATGAGGAG...CCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp CTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACCTTGATGCTATTCATTaGAGAACTCAATTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: LSTWFTGTAMNRIEVTDHLDAIH*RTQFAL
Trigger: GAGAGCAAATTGAGTTCTTCAATGAATAGCATCAAG...GTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp ATGACTGCTGTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATTGATTAGACCCCCAAACTCATaGATTCCATTAGGGAACTTT +
Preference number: 4 (lower is better)
Translates to: MTAVVYATSLTMPIPSLIRPPNS*IPLGNF
Trigger: AAAGTTCCCTAATGGAATTCATGAGTTTGGGGGTCT...AATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAACAGCAGTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTAGGTATATGAAAAGATaGGAAGCTCACACTGGGCTT +
Preference number: 4 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFRYMKR*EAHTGL
Trigger: AAGCCCAGTGTGAGCTTCTCATCTTTTCATATACCT...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGCTGCCCCATAGCTTaGATTCCTTTATTAACAAGA +
Preference number: 4 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFGCPIA*IPLLTR
Trigger: TCTTGTTAATAAAGGAATTCAAGCTATGGGGCAGCC...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCATGTCATTGAAGAACTCAATTTaGTCTCCTTTACTTCCACAT +
Preference number: 4 (lower is better)
Translates to: HPLSLLNSKSIPGFILMSLKNSI*SPLLPH
Trigger: ATGTGGAAGTAAAGGAGAGCAAATTGAGTTCTTCAA...TGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp GAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCTTGAAGAACTCAATTTaGTCTCCTTTACTTCCACAT +
Preference number: 4 (lower is better)
Translates to: ERFDPLSTLDIKKVSVETLKNSI*SPLLPH
Trigger: ATGTGGAAGTAAAGGAGAGCAAATTGAGTTCTTCAA...GGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp AGGGTTGTCAGGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTAAGGTTCGCCAGTCCTaGTGCTACTATCCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: RVVRCPMYNFNLLLFWSSKVRQS*CYYPAE
Trigger: TTCAGCAGGATAGTAGCAGCAGGACTGGCGAACCTT...ACTTGACCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACCTGACAACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
CDS-3UTR GCA 90 bp TTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACATCCTTCAACACTTCAATGTaGTGTTTACTATCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: FDPLSTLDIKKVSVETTSFNTSM*CLLSEN
Trigger: GTTCTCAGATAGTAAACAGCACATTGAAGTGTTGAA...GGATGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp GCTACGTCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCTTCAACACTTCAATGTaGTGTTTACTATCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: ATSLTMPIPSLICSLGVSFNTSM*CLLSEN
Trigger: GTTCTCAGATAGTAAACAGCACATTGAAGTGTTGAA...GCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGACGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp GATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGTTCAACACTTCAATGTaGTGTTTACTATCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: DGRCRNGAGITLLQVSKLFNTSM*CLLSEN
Trigger: GTTCTCAGATAGTAAACAGCACATTGAAGTGTTGAA...CAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR GCA 90 bp GGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGTTTTCTGCCAGAGACTaGTGGGTGGAGGACAGCTTT +
Preference number: 4 (lower is better)
Translates to: GVQCTTLIYFYFGQVLRGFSARD*WVEDSF
Trigger: AAAGCTGTCCTCCACCCAGCAGTCTCTGGCAGAAAA...CCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp AGGGTTGTCAGGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTGTGAGTTTCCTTTTCTaGCAGAGACTGCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: RVVRCPMYNFNLLLFWSSVSFLF*QRLLGG
Trigger: TCCACCCAGCAGTCTCTGGCAGAAAAGGAAACTCAC...ACTTGACCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACCTGACAACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp CATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCATGTCATGGTATCAAAGTCCTTaGAAATCTCAATTGAGATAC +
Preference number: 4 (lower is better)
Translates to: HPLSLLNSKSIPGFILMSWYQSP*KSQLRY
Trigger: GTATCTCAATTGAGATTTGCAAGGACTTTGATACCA...TGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGGAAGCATCTCAGTAAGAGGTTTATGAGCAGAGTCCATTTAACCTTCGATAAGCAGACACAATGTAACTaGCCCAATTCTCTGAATCAC +
Preference number: 4 (lower is better)
Translates to: RKHLSKRFMSRVHLTFDKQTQCN*PNSLNH
Trigger: GTGATTCAGAGAATTGGGGCAGTTACATTGTGTCTG...CTTATCGAAGGTTAAATGGACTCTGCTCATAAACCTCTTACTGAGATGCTTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CTAACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGTCTATGGCTACAAGTTaGTTTAAGGTTAATCAGAAG +
Preference number: 4 (lower is better)
Translates to: LTPQYDNVNSLKQERLVESMATS*FKVNQK
Trigger: CTTCTGATTAACCTTAAACCAACTTGTAGCCATAGA...CTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTCTATGGCTACAAGTTaGTTTAAGGTTAATCAGAAG +
Preference number: 4 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVSMATS*FKVNQK
Trigger: CTTCTGATTAACCTTAAACCAACTTGTAGCCATAGA...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp AGGGTTGTCAGGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTGGGCACTTCCATACATaGTTGCAAGGTCAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: RVVRCPMYNFNLLLFWSSGHFHT*LQGQER
Trigger: CCTTTCCTGACCTTGCAACCATGTATGGAAGTGCCC...ACTTGACCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACCTGACAACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTATTACTATCTGAGAACTaGTTTGTGAGTGTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: AVLQRDSTLYLPWTSRRLLLSEN*FVSVSS
Trigger: GCTAGAAACACTCACAAACCAGTTCTCAGATAGTAA...TAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CCA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTACCCTTTATCTACCCTaGACATCAAGAAGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFTLYLP*TSRRLV
Trigger: CACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGT...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTCTCCAAGTCCATTCCTaGTTTCATTCTCATGTCAGA +
Preference number: 4 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFLQVHS*FHSHVR
Trigger: TCTGACATGAGAATGAAACCAGGAATGGACTTGGAG...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGGTTGTCAGGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTTCAAACAGGAGAGACTaGTGGAGAACACCTCACACC +
Preference number: 4 (lower is better)
Translates to: RVVRCPMYNFNLLLFWSSSNRRD*WRTPHT
Trigger: GGTGTGAGGTGTTCTCCACCAGTCTCTCCTGTTTGA...ACTTGACCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACCTGACAACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000588412.5
CDS-3UTR CCA 90 bp AGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGCATTTGGTTAAGTGTTaGTTCAATGATCTAGACTCA +
Preference number: 4 (lower is better)
Translates to: RQSKMADVETVLESHFFKHLVKC*FNDLDS
Trigger: TGAGTCTAGATCATTGAACCAACACTTAACCAAATG...CTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTAGTTCTAAGAGGGGCTaGATGATCGTTCTGAACAAA +
Preference number: 4 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGSSKRG*MIVLNK
Trigger: TTTGTTCAGAACGATCATCCAGCCCCTCTTAGAACT...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp AGGGTTGTCAGGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTGTGTCTGCAGATCCATaGTTGTGTTATCTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: RVVRCPMYNFNLLLFWSSVSADP*LCYLSP
Trigger: AGGCGAGAGATAACACAATCATGGATCTGCAGACAC...ACTTGACCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACCTGACAACCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp AGGGTTGTCAGGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTTTTAGGGTCTGCTTTTaGGTCTCAATACGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RVVRCPMYNFNLLLFWSSFRVCF*VSIRSS
Trigger: GGAGCTGCGTATTGAGACTCAAAAGCAGACCCTAAA...ACTTGACCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACCTGACAACCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
CDS-3UTR TCA 90 bp TGGCAGAGGGTTGTCAGGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGCGAAGATTAGTCAAGTaGGTTTCCTTTTCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: WQRVVRCPMYNFNLLLFWRRLVK*VSFSAR
Trigger: TCTGGCAGAAAAGGAAACTCACTTGACTAATCTTCG...CCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACCTGACAACCCTCTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp AACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGGCTGGATGATCGTTTGGAATGGGAGGATTTaGAGTGGTCATCCTCGTAGT +
Preference number: 4 (lower is better)
Translates to: NFNLLLFWSSSKRGWMIVWNGRI*SGHPRS
Trigger: ACTACGAGGATGACCACTTCAAATCCTCCCATTCCA...AACGATCATCCAGCCCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp TTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTTTCAACACTTCAATGTaGTGTTTACTATCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: FQCWELSTWFTGTAMNRIFNTSM*CLLSEN
Trigger: GTTCTCAGATAGTAAACAGCACATTGAAGTGTTGAA...AATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTATACCTTCATTGATTTaGAGTCTTGGGGTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGIPSLI*SLGVSF
Trigger: AAAGCTGACCCCAAGACTGCAAATCAATGAAGGTAT...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACAAACTAATTATTTATGACTaGTGTTGTCTACGCTACGTC +
Preference number: 4 (lower is better)
Translates to: STWFTGTAMNRIEVTDHKLIIYD*CCLRYV
Trigger: GACGTAGCGTAGACAACAGCAGTCATAAATAATTAG...TTTGTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TGCTATTTACTGCTTCAACTCCAGCAGGTATGTCTCACAGAATCCACTACATCTCTAATTATTTATGACTaGTGTTGTCTACGCTACGTC +
Preference number: 4 (lower is better)
Translates to: CYLLLQLQQVCLTESTTSLIIYD*CCLRYV
Trigger: GACGTAGCGTAGACAACAGCAGTCATAAATAATTAG...AGATGTAGTGGATTCTGTGAGACATACCTGCTGGAGTTGAAGCAGTAAATAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CCTAGTGTGATGGGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACTGGTATCAAAGTCCTTaGAAATCTCAATTGAGATAC +
Preference number: 4 (lower is better)
Translates to: PSVMGVGHLVKCWFNDLDWYQSP*KSQLRY
Trigger: GTATCTCAATTGAGATTTGCAAGGACTTTGATACCA...GTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCCCATCACACTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp CTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACTGGTATCAAAGTCCTTaGAAATCTCAATTGAGATAC +
Preference number: 4 (lower is better)
Translates to: LSTWFTGTAMNRIEVTDHWYQSP*KSQLRY
Trigger: GTATCTCAATTGAGATTTGCAAGGACTTTGATACCA...GTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp TTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTTGGTATCAAAGTCCTTaGAAATCTCAATTGAGATAC +
Preference number: 4 (lower is better)
Translates to: FQCWELSTWFTGTAMNRIWYQSP*KSQLRY
Trigger: GTATCTCAATTGAGATTTGCAAGGACTTTGATACCA...AATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp ATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGGCTGGATGTTCCTTCTTCAGCTCTaGGCTCCAGAAGGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: MYNFNLLLFWSSSKRGWMFLLQL*APEGLD
Trigger: ATCAAGACCTTCTGGAGCCCAGAGCTGAAGAAGGAA...CATCCAGCCCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTTGTACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGGCTTTACCTTCTCCATaGCCATCAGTAACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GVQCTTLIYFYFGQVLRGALPSP*PSVTPP
Trigger: TGGAGGAGTTACTGATGGCCATGGAGAAGGTAAAGC...CCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CCA 90 bp AGGAAGCATCTCAGTAAGAGGTTTATGAGCAGAGTCCATTTAACCTTCGATAAGATTGATTTGCAGTCTTaGGGTCAGCTTTCTGATTTG +
Preference number: 4 (lower is better)
Translates to: RKHLSKRFMSRVHLTFDKIDLQS*GQLSDL
Trigger: CAAATCAGAAAGCTGACCCCAAGACTGCAAATCAAT...CTTATCGAAGGTTAAATGGACTCTGCTCATAAACCTCTTACTGAGATGCTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp TGCTATTTACTGCTTCAACTCCAGCAGGTATGTCTCACAGAATCCACTACATCTCAGATGTTAAATTACTaGTATTTGCTGACACAGGGT +
Preference number: 4 (lower is better)
Translates to: CYLLLQLQQVCLTESTTSQMLNY*YLLTQG
Trigger: ACCCTGTGTCAGCAAATACCAGTAATTTAACATCTG...AGATGTAGTGGATTCTGTGAGACATACCTGCTGGAGTTGAAGCAGTAAATAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAAGCTCCTGTTTCACCTaGCCAATCTTATTTTTCATA +
Preference number: 4 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVSSCFT*PILFFI
Trigger: TATGAAAAATAAGATTGGCCAGGTGAAACAGGAGCT...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
CDS-3UTR CCA 90 bp TGGCAGAGGGTTGTCAGGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGAGTTCTAAGAGGGGCTaGATGATCGTTCTGAACAAA +
Preference number: 4 (lower is better)
Translates to: WQRVVRCPMYNFNLLLFWSSKRG*MIVLNK
Trigger: TTTGTTCAGAACGATCATCCAGCCCCTCTTAGAACT...CCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACCTGACAACCCTCTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp GGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGAAAATGGGAACCTTGTaGGGTGTCTCTATGGCTACA +
Preference number: 4 (lower is better)
Translates to: GVQCTTLIYFYFGQVLRGKMGTL*GVSMAT
Trigger: TGTAGCCATAGAGACACCTCACAAGGTTCCCATTTT...CCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR TCA 90 bp ATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGGCTGGATGTCTGAACAAAATGGCTaGACTAAGCCTCTGATTGGC +
Preference number: 4 (lower is better)
Translates to: MYNFNLLLFWSSSKRGWMSEQNG*TKPLIG
Trigger: GCCAATCAGAGGCTTAGTTCAGCCATTTTGTTCAGA...CATCCAGCCCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTTGTACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp GGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGAAACTCCTGCAGTTCTaGATTGTCCCGTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: GVQCTTLIYFYFGQVLRGKLLQF*IVPFTF
Trigger: AAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTT...CCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp AGGAAGCATCTCAGTAAGAGGTTTATGAGCAGAGTCCATTTAACCTTCGATAAGCTAATTATTTATGACTaGTGTTGTCTACGCTACGTC +
Preference number: 4 (lower is better)
Translates to: RKHLSKRFMSRVHLTFDKLIIYD*CCLRYV
Trigger: GACGTAGCGTAGACAACAGCAGTCATAAATAATTAG...CTTATCGAAGGTTAAATGGACTCTGCTCATAAACCTCTTACTGAGATGCTTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CCA 90 bp AGGGTTGTCAGGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTGTCATCTGCATGTGCTaGTTTTCCTCCTGTACAACT +
Preference number: 4 (lower is better)
Translates to: RVVRCPMYNFNLLLFWSSVICMC*FSSCTT
Trigger: AGTTGTACAGGAGGAAAACCAGCACATGCAGATGAC...ACTTGACCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACCTGACAACCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
CDS-3UTR TCA 90 bp TTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACTCTGAAAGCTACTTTTCAATCTTCTTCTaGAGAACATTAACCTTCCGC +
Preference number: 4 (lower is better)
Translates to: LVKCWFNDLDSMRHSESYFSIFF*RTLTFR
Trigger: GCGGAAGGTTAATGTTCTTCAGAAGAAGATTGAAAA...GTAGCTTTCAGAGTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp ATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGGCTGGATGCGAAGATTAGTCAAGTaGGTTTCCTTTTCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: MYNFNLLLFWSSSKRGWMRRLVK*VSFSAR
Trigger: TCTGGCAGAAAAGGAAACTCACTTGACTAATCTTCG...CATCCAGCCCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTTGTACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR TCA 90 bp AGGGTTGTCAGGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTCGAAGATTAGTCAAGTaGGTTTCCTTTTCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: RVVRCPMYNFNLLLFWSSRRLVK*VSFSAR
Trigger: TCTGGCAGAAAAGGAAACTCACTTGACTAATCTTCG...ACTTGACCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACCTGACAACCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR GCA 90 bp ATGACTGCTGTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATTGATTTTGAAGAACTCAATTTaGTCTCCTTTACTTCCACAT +
Preference number: 4 (lower is better)
Translates to: MTAVVYATSLTMPIPSLILKNSI*SPLLPH
Trigger: ATGTGGAAGTAAAGGAGAGCAAATTGAGTTCTTCAA...AATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAACAGCAGTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR GCA 90 bp AGGGTTGTCAGGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTTCATCTCTGTCCCTCTaGTCCTTTAAGCGTTCAATT +
Preference number: 4 (lower is better)
Translates to: RVVRCPMYNFNLLLFWSSSSLSL*SFKRSI
Trigger: AATTGAACGCTTAAAGGAGCAGAGGGACAGAGATGA...ACTTGACCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACCTGACAACCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CCA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTTCTATGGCTACAAGTTaGTTTAAGGTTAATCAGAAG +
Preference number: 4 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGSMATS*FKVNQK
Trigger: CTTCTGATTAACCTTAAACCAACTTGTAGCCATAGA...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CCA 90 bp AGGGTTGTCAGGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTTGTGAGGTGTCTCTATaGCTACAAGTTGGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: RVVRCPMYNFNLLLFWSSCEVSL*LQVGLR
Trigger: CCTTAAACCAACTTGTAGCCATAGAGACACCTCACA...ACTTGACCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACCTGACAACCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CCA 90 bp GGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGTGTGAGGTGTCTCTATaGCTACAAGTTGGTTTAAGG +
Preference number: 4 (lower is better)
Translates to: GVQCTTLIYFYFGQVLRGCEVSL*LQVGLR
Trigger: CCTTAAACCAACTTGTAGCCATAGAGACACCTCACA...CCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CCA 90 bp ATGACTGCTGTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATTGATTCATTTGGTTAAGTGTTaGTTCAATGATCTAGACTCA +
Preference number: 4 (lower is better)
Translates to: MTAVVYATSLTMPIPSLIHLVKC*FNDLDS
Trigger: TGAGTCTAGATCATTGAACCAACACTTAACCAAATG...AATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAACAGCAGTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR TCA 90 bp AACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGGCTGGATGATCGTTTTTTCAATCTTCTTCTaGAGAACATTAACCTTCCGC +
Preference number: 4 (lower is better)
Translates to: NFNLLLFWSSSKRGWMIVFSIFF*RTLTFR
Trigger: GCGGAAGGTTAATGTTCTTCAGAAGAAGATTGAAAA...AACGATCATCCAGCCCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS GCA 90 bp AAGAAGTATCTTACACCATATCGTCCTCAGGGCTGCCGCTACTGCTaGTGCTGCCGCCCAGGCACCGCCGCCGCCGCCACTACCGCCGCC +
Preference number: 5 (lower is better)
Translates to: KKYLTPYRPQGCRYC*CCRPGTAAAATTAA
Trigger: GGCGGCGGTAGTGGCGGCGGCGGCGGTGCCTGGGCGGCAGCAGCAGCAGTAGCGGCAGCCCTGAGGACGATATGGTGTAAGATACTTCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360905.9
ENST00000543086.7
CDS CCA 90 bp CCCAAGCGAGGGGAACGTGGAAGCCTGGGTGAACGCCCAGGGCTCTaGCTGCTCGGCTCCACCTTCCCAACAGAGCGGGCACTTCCATAC +
Preference number: 5 (lower is better)
Translates to: PKRGERGSLGERPGL*LLGSTFPTERALPY
Trigger: GTATGGAAGTGCCCGCTCTGTTGGGAAGGTGGAGCCGAGCAGCCAGAGCCCTGGGCGTTCACCCAGGCTTCCACGTTCCCCTCGCTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545318.2
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000589132.1
ENST00000611180.4
CDS TCA 90 bp CCAACACTGCTTCCCGAACTCCCTCCCGTACTGTTGGTTCGACGGTaGCCCAAGCGAGGGGAACGTGGAAGCCTGGGTGAACGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: PTLLPELPPVLLVRR*PKRGERGSLGERPG
Trigger: CCCTGGGCGTTCACCCAGGCTTCCACGTTCCCCTCGCTTGGGTCACCGTCGAACCAACAGTACGGGAGGGAGTTCGGGAAGCAGTGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545318.2
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000589132.1
ENST00000611180.4
CDS CCA 90 bp CACTGCCACCTCCAACACTGCTTCCCGAACTCCCTCCCGTACTGTTaGTTCGACGGTGACCCAAGCGAGGGGAACGTGGAAGCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: HCHLQHCFPNSLPYC*FDGDPSEGNVEAWV
Trigger: CACCCAGGCTTCCACGTTCCCCTCGCTTGGGTCACCGTCGAACCAACAGTACGGGAGGGAGTTCGGGAAGCAGTGTTGGAGGTGGCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545318.2
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000589132.1
ENST00000611180.4
CDS-3UTR CAA 90 bp CCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGGAGCTGTCGTTGAGATaGTCCTCCCGTCGTCGCGCC +
Preference number: 5 (lower is better)
Translates to: PRRIRGSRSWQRVVRCPMELSLR*SSRRRA
Trigger: GGCGCGACGACGGGAGGACAATCTCAACGACAGCTC...CATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp GTTTCCTCTCACAGGGAGAGGGATTGTTTCACAGCAGGGAGTAGGGGGAGCTGGGCCTCGCCTGCTGTCTaGGTTCCACCGTGGCCCCGT +
Preference number: 5 (lower is better)
Translates to: VSSHRERDCFTAGSRGSWASPAV*VPPWPR
Trigger: ACGGGGCCACGGTGGAACCAAGACAGCAGGCGAGGC...CCAGCTCCCCCTACTCCCTGCTGTGAAACAATCCCTCTCCCTGTGAGAGGAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATGCCTCGCCTGCTGTCTaGGTTCCACCGTGGCCCCGT +
Preference number: 5 (lower is better)
Translates to: RQGWMKTQTLGERVLPSHASPAV*VPPWPR
Trigger: ACGGGGCCACGGTGGAACCAAGACAGCAGGCGAGGC...ATGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCACCCAGAGGGCCTGCTTaGGCCGGGGTGAATTCTCTG +
Preference number: 5 (lower is better)
Translates to: VRGQEVRGSSAPWLSVRAPRGPA*AGVNSL
Trigger: CAGAGAATTCACCCCGGCCAAAGCAGGCCCTCTGGG...TGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GGAGAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCTTCTTGGCTCCTGGGTaGACTACCTCAGGCTTCCCC +
Preference number: 5 (lower is better)
Translates to: GESSWPVPVPDHLFRHGLFLAPG*TTSGFP
Trigger: GGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAA...GAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GCTGGTGGAGTGAGTCCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTTTCTTGGCTCCTGGGTaGACTACCTCAGGCTTCCCC +
Preference number: 5 (lower is better)
Translates to: AGGVSPRRIRGSRSWQRVFLAPG*TTSGFP
Trigger: GGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAA...AACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGGACTCACTCCACCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp GGAGAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCAAGGCAGGCAGCCTCTaGGAGGTGTTCAGGGGAAAC +
Preference number: 5 (lower is better)
Translates to: GESSWPVPVPDHLFRHGLKAGSL*EVFRGN
Trigger: GTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTT...GAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGCCAAGGCAGGCAGCCTCTaGGAGGTGTTCAGGGGAAAC +
Preference number: 5 (lower is better)
Translates to: RTGGERLLCSMALCQGRAKAGSL*EVFRGN
Trigger: GTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTT...GGCTCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGGGGGTTTTTGCCATCTaGGCCAGGCTGGCCTCGAAC +
Preference number: 5 (lower is better)
Translates to: ARQAASWRCSGETSPRATGVFAI*ARLASN
Trigger: GTTCGAGGCCAGCCTGGCCAAGATGGCAAAAACCCC...CGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCGTCACAATGCCCTTCTaGACACTGAAGGCGGCCTTG +
Preference number: 5 (lower is better)
Translates to: ESSWPVPVPDHLFRHGLAVTMPF*TLKAAL
Trigger: CAAGGCCGCCTTCAGTGTCAAGAAGGGCATTGTGAC...GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CAGGCGCTGCACCTGATGAGAAAGTCCACGTGGGTGGGATCTGGGCCACCTGCTGACTCTTCCAGGGCGTaGACCACTTGCTCTAGGATG +
Preference number: 5 (lower is better)
Translates to: QALHLMRKSTWVGSGPPADSSRA*TTCSRM
Trigger: CATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTC...AGCAGGTGGCCCAGATCCCACCCACGTGGACTTTCTCATCAGGTGCAGCGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGATTCTTGGCTCCTGGGTaGACTACCTCAGGCTTCCCC +
Preference number: 5 (lower is better)
Translates to: QRTGGERLLCSMALCQGRFLAPG*TTSGFP
Trigger: GGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAA...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGAAGGCAGGCAGCCTCTaGGAGGTGTTCAGGGGAAAC +
Preference number: 5 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPKAGSL*EVFRGN
Trigger: GTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTT...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TCTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGGCCTCGCCTGCTGTCTaGGTTCCACCGTGGCCCCGT +
Preference number: 5 (lower is better)
Translates to: SGPLEASSQPVELQVHSWASPAV*VPPWPR
Trigger: ACGGGGCCACGGTGGAACCAAGACAGCAGGCGAGGC...CCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CAGGCGCTGCACCTGATGAGAAAGTCCACGTGGGTGGGATCTGGGCCACCTGCTAAAGGGCAACTAGACTaGCCGATGGAGGGGTTTGGG +
Preference number: 5 (lower is better)
Translates to: QALHLMRKSTWVGSGPPAKGQLD*PMEGFG
Trigger: CCCAAACCCCTCCATCGGCAAGTCTAGTTGCCCTTT...AGCAGGTGGCCCAGATCCCACCCACGTGGACTTTCTCATCAGGTGCAGCGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTCAGGGTCCGCTGGGCTaGAGAAATGCCATGTGGTGT +
Preference number: 5 (lower is better)
Translates to: PVPVPDHLFRHGLACCLGQGPLG*RNAMWC
Trigger: ACACCACATGGCATTTCTCAAGCCCAGCGGACCCTG...ACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGCCTCTTCCTCGGTAGCCTaGGCAGAAAGTCCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: RTGGERLLCSMALCQGRASSSVA*AESPLL
Trigger: GAGCAAAGGACTTTCTGCCAAGGCTACCGAGGAAGA...GGCTCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp CAGGCGCTGCACCTGATGAGAAAGTCCACGTGGGTGGGATCTGGGCCACCTGCTCCTCTGCCAGTCGTCTaGTTCTCTCATGGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: QALHLMRKSTWVGSGPPAPLPVV*FSHGLP
Trigger: AGGAAGACCATGAGAGAACAAGACGACTGGCAGAGG...AGCAGGTGGCCCAGATCCCACCCACGTGGACTTTCTCATCAGGTGCAGCGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGAAGGCAGTGTCAGTGTaGGTGGTGTCAGCCTGCAAG +
Preference number: 5 (lower is better)
Translates to: ARQAASWRCSGETSPRATKAVSV*VVSACK
Trigger: CTTGCAGGCTGACACCACCAACACTGACACTGCCTT...CGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAAGGGCCTCCTCCAAAGTaGTCAAGGCAGTGTCAGTGT +
Preference number: 5 (lower is better)
Translates to: SGHGCWQGRQPLGGVQGKGPPPK*SRQCQC
Trigger: ACACTGACACTGCCTTGACAACTTTGGAGGAGGCCC...TTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGCCGGCAGCCACTTCCTCTaGGGTCTTCTTCTTAGAGGA +
Preference number: 5 (lower is better)
Translates to: RTGGERLLCSMALCQGRAGSHFL*GLLLRG
Trigger: TCCTCTAAGAAGAAGACCCAAGAGGAAGTGGCTGCC...GGCTCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp GTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGACTCTTCCAGGGCGTaGACCACTTGCTCTAGGATG +
Preference number: 5 (lower is better)
Translates to: VRGQEVRGSSAPWLSVRADSSRA*TTCSRM
Trigger: CATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTC...TGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp GCTGCCCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTATGAAGACTCAGACCTaGGGAGAACGAGTGCTCCCA +
Preference number: 5 (lower is better)
Translates to: AAPGSSSAAHSPKPPGHRMKTQT*GERVLP
Trigger: TGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCAT...ACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCGGGGGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000588412.5
CDS-3UTR CAA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCGCCTCGCCTGCTGTCTaGGTTCCACCGTGGCCCCGT +
Preference number: 5 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFASPAV*VPPWPR
Trigger: ACGGGGCCACGGTGGAACCAAGACAGCAGGCGAGGC...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CCACTGGGCTGCAGGAGCTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTGGTCAAGAAGATTCCTaGCTGTTCACAGAGACCAGA +
Preference number: 5 (lower is better)
Translates to: PLGCRSSGHGCWQGRQPLGQEDS*LFTETR
Trigger: TCTGGTCTCTGTGAACAGCAAGGAATCTTCTTGACC...AAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGCCCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGAAGACTCTGAGGGTCTaGACACCGGGCCTACACTCA +
Preference number: 5 (lower is better)
Translates to: ARQAASWRCSGETSPRATKTLRV*TPGLHS
Trigger: TGAGTGTAGGCCCGGTGTCAAGACCCTCAGAGTCTT...CGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGAAGACTCTGAGGGTCTaGACACCGGGCCTACACTCA +
Preference number: 5 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPKTLRV*TPGLHS
Trigger: TGAGTGTAGGCCCGGTGTCAAGACCCTCAGAGTCTT...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS CCA 90 bp TTGACACACAGCAGCTGTGAGCACTGCGAAGCACCGCCAAAACGCTaGCAGATCTCAGTGTGTTCCCAGGGCTCACACAGCAGGTCTGCA +
Preference number: 5 (lower is better)
Translates to: LTHSSCEHCEAPPKR*QISVCSQGSHSRSA
Trigger: TGCAGACCTGCTGTGTGAGCCCTGGGAACACACTGAGATCTGCCAGCGTTTTGGCGGTGCTTCGCAGTGCTCACAGCTGCTGTGTGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543151.1
CDS-3UTR CAA 90 bp GCTGGTGGAGTGAGTCCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTCCACTGCTAGCTATATaGGGGCTACTACCCATAGCA +
Preference number: 5 (lower is better)
Translates to: AGGVSPRRIRGSRSWQRVPLLAI*GLLPIA
Trigger: TGCTATGGGTAGTAGCCCCAATATAGCTAGCAGTGG...AACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGGACTCACTCCACCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp CCACTGGGCTGCAGGAGCTCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTTTGGCAGAAAGTCCTTaGCTCTGCAACATTTCCAGA +
Preference number: 5 (lower is better)
Translates to: PLGCRSSGHGCWQGRQPLLAESP*LCNISR
Trigger: TCTGGAAATGTTGCAGAGCAAAGGACTTTCTGCCAA...AAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGAGCTCCTGCAGCCCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGTCTTCCTCGGTAGCCTaGGCAGAAAGTCCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPSSSVA*AESPLL
Trigger: GAGCAAAGGACTTTCTGCCAAGGCTACCGAGGAAGA...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGTCTTCCTCGGTAGCCTaGGCAGAAAGTCCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: PRRIRGSRSWQRVVRCPMSSSVA*AESPLL
Trigger: GAGCAAAGGACTTTCTGCCAAGGCTACCGAGGAAGA...CATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
CDS-3UTR CAA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCTCAGCCTGCAAGGATTaGACCCGTTCTTTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSSACKD*TRSFKL
Trigger: CAGCTTGAAAGAACGGGTCAAATCCTTGCAGGCTGA...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAGCCTCAGCCTGCAAGGATTaGACCCGTTCTTTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: RTGGERLLCSMALCQGRASACKD*TRSFKL
Trigger: CAGCTTGAAAGAACGGGTCAAATCCTTGCAGGCTGA...GGCTCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp CGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGTACGGGCCTCCTCCAAAGTaGTCAAGGCAGTGTCAGTGT +
Preference number: 5 (lower is better)
Translates to: RRIRGSRSWQRVVRCPMYGPPPK*SRQCQC
Trigger: ACACTGACACTGCCTTGACAACTTTGGAGGAGGCCC...GTACATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp GCGGCCTCACTCTGCAGAGGGTGCCTGCTGCATTGCAGTCTCTTCTCATCCTTCGGGCCTCCTCCAAAGTaGTCAAGGCAGTGTCAGTGT +
Preference number: 5 (lower is better)
Translates to: AASLCRGCLLHCSLFSSFGPPPK*SRQCQC
Trigger: ACACTGACACTGCCTTGACAACTTTGGAGGAGGCCC...GAAGGATGAGAAGAGACTGCAATGCAGCAGGCACCCTCTGCAGAGTGAGGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGGAGCTGTCGTTGAGATaGTCCTCCCGTCGTCGCGCC +
Preference number: 5 (lower is better)
Translates to: WFHSHVRGQEVRGSSAPWELSLR*SSRRRA
Trigger: GGCGCGACGACGGGAGGACAATCTCAACGACAGCTC...CCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGAGCTGTCGTTGAGATaGTCCTCCCGTCGTCGCGCC +
Preference number: 5 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLELSLR*SSRRRA
Trigger: GGCGCGACGACGGGAGGACAATCTCAACGACAGCTC...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TGGGACAGTCAAGGGCTGGTGGTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGGGCAGCCACTTCCTCTaGGGTCTTCTTCTTAGAGGA +
Preference number: 5 (lower is better)
Translates to: WDSQGLVVGSSWTDGAVLGSHFL*GLLLRG
Trigger: TCCTCTAAGAAGAAGACCCAAGAGGAAGTGGCTGCC...CAGCACAGCCCCATCAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTGGCAGCCACTTCCTCTaGGGTCTTCTTCTTAGAGGA +
Preference number: 5 (lower is better)
Translates to: PVPVPDHLFRHGLACCLGGSHFL*GLLLRG
Trigger: TCCTCTAAGAAGAAGACCCAAGAGGAAGTGGCTGCC...ACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGGGTCATGGCAGAGGGTaGTCAGGTGTCCAATGTACA +
Preference number: 5 (lower is better)
Translates to: PRRIRGSRSWQRVVRCPMGHGRG*SGVQCT
Trigger: TGTACATTGGACACCTGACAACCCTCTGCCATGACC...CATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCTCCTGCAGTTCTGCATaGTCCCGTTCACCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSSCSSA*SRSPFS
Trigger: AGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGA...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GGAGAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCTCCTGCAGTTCTGCATaGTCCCGTTCACCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: GESSWPVPVPDHLFRHGLSCSSA*SRSPFS
Trigger: AGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGA...GAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GCTGCCCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTTCCTGCAGTTCTGCATaGTCCCGTTCACCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: AAPGSSSAAHSPKPPGHRSCSSA*SRSPFS
Trigger: AGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGA...ACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCGGGGGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp AGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATTTCTTGGCTCCTGGGTaGACTACCTCAGGCTTCCCC +
Preference number: 5 (lower is better)
Translates to: RQGWMKTQTLGERVLPSHFLAPG*TTSGFP
Trigger: GGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAA...ATGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGATGAAGACTCAGACCTaGGGAGAACGAGTGCTCCCA +
Preference number: 5 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPMKTQT*GERVLP
Trigger: TGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCAT...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTCCCGTGCCAGACCACTaGTTTAGGCATGGCCTCGCC +
Preference number: 5 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTPVPDH*FRHGLA
Trigger: GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGG...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CTTCCTCCTCAGTTCCGAACCCAGGCAGGTGAAGAGGAGGCCAGGAGCAGATGTAAAGGGCAACTAGACTaGCCGATGGAGGGGTTTGGG +
Preference number: 5 (lower is better)
Translates to: LPPQFRTQAGEEEARSRCKGQLD*PMEGFG
Trigger: CCCAAACCCCTCCATCGGCAAGTCTAGTTGCCCTTT...ACATCTGCTCCTGGCCTCCTCTTCACCTGCCTGGGTTCGGAACTGAGGAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GTTCTGCATTGTCCCGTTCACCTTTCTCTAACTCATCCTGAAGCTGCCCCCGGGGGGGTTTTTGCCATCTaGGCCAGGCTGGCCTCGAAC +
Preference number: 5 (lower is better)
Translates to: VLHCPVHLSLTHPEAAPGGVFAI*ARLASN
Trigger: GTTCGAGGCCAGCCTGGCCAAGATGGCAAAAACCCC...CCCGGGGGCAGCTTCAGGATGAGTTAGAGAAAGGTGAACGGGACAATGCAGAAC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000440394.7
CDS-3UTR CAA 90 bp TGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCCCAGAGGGCCTGCTTaGGCCGGGGTGAATTCTCTG +
Preference number: 5 (lower is better)
Translates to: WFHSHVRGQEVRGSSAPWPRGPA*AGVNSL
Trigger: CAGAGAATTCACCCCGGCCAAAGCAGGCCCTCTGGG...CCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTCCCAGAGGGCCTGCTTaGGCCGGGGTGAATTCTCTG +
Preference number: 5 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTPRGPA*AGVNSL
Trigger: CAGAGAATTCACCCCGGCCAAAGCAGGCCCTCTGGG...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTCCACTGCTAGCTATATaGGGGCTACTACCCATAGCA +
Preference number: 5 (lower is better)
Translates to: PVPVPDHLFRHGLACCLGPLLAI*GLLPIA
Trigger: TGCTATGGGTAGTAGCCCCAATATAGCTAGCAGTGG...ACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp ACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCAAGGCAGTGTCAGTGTaGGTGGTGTCAGCCTGCAAG +
Preference number: 5 (lower is better)
Translates to: TSGFPIKQGQEDSSRALTKAVSV*VVSACK
Trigger: CTTGCAGGCTGACACCACCAACACTGACACTGCCTT...GGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCGAGCTGTCGTTGAGATaGTCCTCCCGTCGTCGCGCC +
Preference number: 5 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFELSLR*SSRRRA
Trigger: GGCGCGACGACGGGAGGACAATCTCAACGACAGCTC...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAGCCAGAAGAGCTTCTaGCTTCATCTCCAGAACTTC +
Preference number: 5 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSSQKSF*LHLQNF
Trigger: GAAGTTCTGGAGATGAAGCAAGAAGCTCTTCTGGCT...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GCGGCCTCACTCTGCAGAGGGTGCCTGCTGCATTGCAGTCTCTTCTCATCCTTCGGCAGCCACTTCCTCTaGGGTCTTCTTCTTAGAGGA +
Preference number: 5 (lower is better)
Translates to: AASLCRGCLLHCSLFSSFGSHFL*GLLLRG
Trigger: TCCTCTAAGAAGAAGACCCAAGAGGAAGTGGCTGCC...GAAGGATGAGAAGAGACTGCAATGCAGCAGGCACCCTCTGCAGAGTGAGGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGTCCTGCAGTTCTGCATaGTCCCGTTCACCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: PRRIRGSRSWQRVVRCPMSCSSA*SRSPFS
Trigger: AGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGA...CATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp GTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCACGTAGTTCTCTTTTCTaGGCTCCTGGGTTGACTACC +
Preference number: 5 (lower is better)
Translates to: VRGQEVRGSSAPWLSVRARSSLF*APGLTT
Trigger: GGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACG...TGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp TCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACATCCTCTCAGCCTGTaGAACTCCAAGTCCATTCCT +
Preference number: 5 (lower is better)
Translates to: SGHGCWQGRQPLGGVQGKHPLSL*NSKSIP
Trigger: AGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG...TTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGCATCCTCTCAGCCTGTaGAACTCCAAGTCCATTCCT +
Preference number: 5 (lower is better)
Translates to: PRVIFCSSFSQAAWSSSKHPLSL*NSKSIP
Trigger: AGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG...CTTGGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000588412.5
CDS-3UTR CAA 90 bp GTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCAAGGCAGGCAGCCTCTaGGAGGTGTTCAGGGGAAAC +
Preference number: 5 (lower is better)
Translates to: VDYLRLPHKAGSRGLFQGKAGSL*EVFRGN
Trigger: GTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTT...GCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
CDS-3UTR CAA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCCCCGTGCCAGACCACTaGTTTAGGCATGGCCTCGCC +
Preference number: 5 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFPVPDH*FRHGLA
Trigger: GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGG...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCCCGTGCCAGACCACTaGTTTAGGCATGGCCTCGCC +
Preference number: 5 (lower is better)
Translates to: GPLEASSQPVELQVHSWFPVPDH*FRHGLA
Trigger: GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGG...AAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGAGGGCTTCCTCCCGTGCCAGACCACTaGTTTAGGCATGGCCTCGCC +
Preference number: 5 (lower is better)
Translates to: DIGPGNASSQKQCHRGLPPVPDH*FRHGLA
Trigger: GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGG...AGGAAGCCCTCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCCTCTTTATGGTGACATaGGTTTGGGGTGCAGATCTT +
Preference number: 5 (lower is better)
Translates to: ESSWPVPVPDHLFRHGLALFMVT*VWGADL
Trigger: AAGATCTGCACCCCAAACCAATGTCACCATAAAGAG...GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGAGTTACAAAACCCCGTaGGGATCACACCCACTCTTC +
Preference number: 5 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPSYKTP*GSHPLF
Trigger: GAAGAGTGGGTGTGATCCCAACGGGGTTTTGTAACT...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGAGCGGTCTTCTCTGCTaGGCTCTTTCCTCAAAGACT +
Preference number: 5 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPSGLLC*ALSSKT
Trigger: AGTCTTTGAGGAAAGAGCCAAGCAGAGAAGACCGCT...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS TCA 90 bp TGGCCATCAGTAACTCCTCCACCTGTAGCTGCTGAGAGCTGTCGTTaGGATTGTCCTCCCGTCGTCGCGCCTCCTCTAACATTTGTGCAC +
Preference number: 5 (lower is better)
Translates to: WPSVTPPPVAAESCR*DCPPVVAPPLTFVH
Trigger: GTGCACAAATGTTAGAGGAGGCGCGACGACGGGAGGACAATCTCAACGACAGCTCTCAGCAGCTACAGGTGGAGGAGTTACTGATGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000538971.6
ENST00000542302.6
CDS TCA 90 bp AACACTGAAGCATTAGAGCAGCCCCTGCTTGACACACAGCAGCTGTaGGCACTGCGAAGCACCGCCAAAACGCTGGCAGATCTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: NTEALEQPLLDTQQL*ALRSTAKTLADLSV
Trigger: CACACTGAGATCTGCCAGCGTTTTGGCGGTGCTTCGCAGTGCTCACAGCTGCTGTGTGTCAAGCAGGGGCTGCTCTAATGCTTCAGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543151.1
CDS CCA 90 bp CCAGCTCTTCAATCCTGTCATCCTTCTTACGGAGACTGTCATGGCTaGCAAGGTGGTGCAGCTAGTGGCAAGAGGCCTCTGTTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: PALQSCHPSYGDCHG*QGGAASGKRPLFLS
Trigger: GGAGAGGAACAGAGGCCTCTTGCCACTAGCTGCACCACCTTGCCAGCCATGACAGTCTCCGTAAGAAGGATGACAGGATTGAAGAGCTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543263.2
CDS-3UTR CAA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGCACTTCCATACATGGTaGCAAGGTCAGGAAAGGTGT +
Preference number: 5 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPHFHTW*QGQERC
Trigger: ACACCTTTCCTGACCTTGCAACCATGTATGGAAGTG...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TGGGACAGTCAAGGGCTGGTGGTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGCACTTCCATACATGGTaGCAAGGTCAGGAAAGGTGT +
Preference number: 5 (lower is better)
Translates to: WDSQGLVVGSSWTDGAVLHFHTW*QGQERC
Trigger: ACACCTTTCCTGACCTTGCAACCATGTATGGAAGTG...CAGCACAGCCCCATCAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GTTTCCTCTCACAGGGAGAGGGATTGTTTCACAGCAGGGAGTAGGGGGAGCTGGAGAAGAAACAGCTCTTaGGCCTGCCGCTCATGCTCA +
Preference number: 5 (lower is better)
Translates to: VSSHRERDCFTAGSRGSWRRNSS*ACRSCS
Trigger: TGAGCATGAGCGGCAGGCCAAAGAGCTGTTTCTTCT...CCAGCTCCCCCTACTCCCTGCTGTGAAACAATCCCTCTCCCTGTGAGAGGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GCTGGTGGAGTGAGTCCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTTTGGCAGAAAGTCCTTaGCTCTGCAACATTTCCAGA +
Preference number: 5 (lower is better)
Translates to: AGGVSPRRIRGSRSWQRVLAESP*LCNISR
Trigger: TCTGGAAATGTTGCAGAGCAAAGGACTTTCTGCCAA...AACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGGACTCACTCCACCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
CDS-3UTR CAA 90 bp GGAGAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCCAGTTTGCAGAGCTTTaGTTTTGGCAGAATCAGGAG +
Preference number: 5 (lower is better)
Translates to: GESSWPVPVPDHLFRHGLQFAEL*FWQNQE
Trigger: CTCCTGATTCTGCCAAAACAAAAGCTCTGCAAACTG...GAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCACATCCAACATGTCCTaGAGGTCATGTATCTCTCCA +
Preference number: 5 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSTSNMS*RSCISP
Trigger: TGGAGAGATACATGACCTCAAGGACATGTTGGATGT...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGGGCCTCCTCCAAAGTaGTCAAGGCAGTGTCAGTGT +
Preference number: 5 (lower is better)
Translates to: VDYLRLPHKAGSRGLFQGGPPPK*SRQCQC
Trigger: ACACTGACACTGCCTTGACAACTTTGGAGGAGGCCC...GCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp GAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCATTCTGGTCTTTCACTaGCCTTTCCAACTCAGCTAT +
Preference number: 5 (lower is better)
Translates to: ESSWPVPVPDHLFRHGLAILVFH*PFQLSY
Trigger: ATAGCTGAGTTGGAAAGGCAAGTGAAAGACCAGAAT...GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTGAGCTGTCGTTGAGATaGTCCTCCCGTCGTCGCGCC +
Preference number: 5 (lower is better)
Translates to: RMALANSCSSALSRSPFSELSLR*SSRRRA
Trigger: GGCGCGACGACGGGAGGACAATCTCAACGACAGCTC...AGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TGGGACAGTCAAGGGCTGGTGGTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGACCTGTTTTTCAGCATaGGTCCTGGCTGATTCCTCT +
Preference number: 5 (lower is better)
Translates to: WDSQGLVVGSSWTDGAVLTCFSA*VLADSS
Trigger: AGAGGAATCAGCCAGGACCAATGCTGAAAAACAGGT...CAGCACAGCCCCATCAGTCCAGGAACTTCCCACCACCAGCCCTTGACTGTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAAGCCAGAAGAGCTTCTaGCTTCATCTCCAGAACTTC +
Preference number: 5 (lower is better)
Translates to: QRTGGERLLCSMALCQGRSQKSF*LHLQNF
Trigger: GAAGTTCTGGAGATGAAGCAAGAAGCTCTTCTGGCT...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp AGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATGGTCATGGCAGAGGGTaGTCAGGTGTCCAATGTACA +
Preference number: 5 (lower is better)
Translates to: RQGWMKTQTLGERVLPSHGHGRG*SGVQCT
Trigger: TGTACATTGGACACCTGACAACCCTCTGCCATGACC...ATGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp CGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCATTCTTGGCTCCTGGGTaGACTACCTCAGGCTTCCCC +
Preference number: 5 (lower is better)
Translates to: RAPVPRSSLFLAPGLTTSFLAPG*TTSGFP
Trigger: GGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAA...TGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp CTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCTTGGCTCCTGGGTaGACTACCTCAGGCTTCCCC +
Preference number: 5 (lower is better)
Translates to: LVHWRHPLSLLNSKSIPGFLAPG*TTSGFP
Trigger: GGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAA...ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTAAGGCAGGCAGCCTCTaGGAGGTGTTCAGGGGAAAC +
Preference number: 5 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTKAGSL*EVFRGN
Trigger: GTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTT...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CAGGCGCTGCACCTGATGAGAAAGTCCACGTGGGTGGGATCTGGGCCACCTGCTTCAAGGATGGATGACTaGCACACAGTAGGCATTTCA +
Preference number: 5 (lower is better)
Translates to: QALHLMRKSTWVGSGPPASRMDD*HTVGIS
Trigger: TGAAATGCCTACTGTGTGCAAGTCATCCATCCTTGA...AGCAGGTGGCCCAGATCCCACCCACGTGGACTTTCTCATCAGGTGCAGCGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCTCAAGGATGGATGACTaGCACACAGTAGGCATTTCA +
Preference number: 5 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSSRMDD*HTVGIS
Trigger: TGAAATGCCTACTGTGTGCAAGTCATCCATCCTTGA...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTGGTCAAGAAGATTCCTaGCTGTTCACAGAGACCAGA +
Preference number: 5 (lower is better)
Translates to: PVPVPDHLFRHGLACCLGGQEDS*LFTETR
Trigger: TCTGGTCTCTGTGAACAGCAAGGAATCTTCTTGACC...ACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GGAGAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCCTCTTTATGGTGACATaGGTTTGGGGTGCAGATCTT +
Preference number: 5 (lower is better)
Translates to: GESSWPVPVPDHLFRHGLLFMVT*VWGADL
Trigger: AAGATCTGCACCCCAAACCAATGTCACCATAAAGAG...GAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCTTAAATTACTGGTATTaGCTGACACAGGGTCCGCTG +
Preference number: 5 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSLNYWY*LTQGPL
Trigger: CAGCGGACCCTGTGTCAGCAAATACCAGTAATTTAA...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS TCA 90 bp CATCCTTCTTACGGAGACTGTCCTGTAGCTGCTGAGAGCTGTCGTTaGGATTGTCCTCCCGTCGTCGCGCCTCCTCTAACATTTGTGCAC +
Preference number: 5 (lower is better)
Translates to: HPSYGDCPVAAESCR*DCPPVVAPPLTFVH
Trigger: GTGCACAAATGTTAGAGGAGGCGCGACGACGGGAGGACAATCTCAACGACAGCTCTCAGCAGCTACAGGACAGTCTCCGTAAGAAGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000544277.1
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGAGAAGAAACAGCTCTTaGGCCTGCCGCTCATGCTCA +
Preference number: 5 (lower is better)
Translates to: LTTSGFPIKQGQEDSSRARRNSS*ACRSCS
Trigger: TGAGCATGAGCGGCAGGCCAAAGAGCTGTTTCTTCT...CGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
CDS-3UTR CAA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGTTGGCAGAAAGTCCTTaGCTCTGCAACATTTCCAGA +
Preference number: 5 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPLAESP*LCNISR
Trigger: TCTGGAAATGTTGCAGAGCAAAGGACTTTCTGCCAA...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGCAGTTTGCAGAGCTTTaGTTTTGGCAGAATCAGGAG +
Preference number: 5 (lower is better)
Translates to: ARQAASWRCSGETSPRATQFAEL*FWQNQE
Trigger: CTCCTGATTCTGCCAAAACAAAAGCTCTGCAAACTG...CGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGACAGTTTGCAGAGCTTTaGTTTTGGCAGAATCAGGAG +
Preference number: 5 (lower is better)
Translates to: QRTGGERLLCSMALCQGRQFAEL*FWQNQE
Trigger: CTCCTGATTCTGCCAAAACAAAAGCTCTGCAAACTG...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp CCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGACATCCAACATGTCCTaGAGGTCATGTATCTCTCCA +
Preference number: 5 (lower is better)
Translates to: PRRIRGSRSWQRVVRCPMTSNMS*RSCISP
Trigger: TGGAGAGATACATGACCTCAAGGACATGTTGGATGT...CATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp GTGCACGTGCATCCCAGACACCACCATGGAGGCTGCTACTGTTACCAAAAGGAAAAGGCAGTGTCAGTGTaGGTGGTGTCAGCCTGCAAG +
Preference number: 5 (lower is better)
Translates to: VHVHPRHHHGGCYCYQKEKAVSV*VVSACK
Trigger: CTTGCAGGCTGACACCACCAACACTGACACTGCCTT...TTCCTTTTGGTAACAGTAGCAGCCTCCATGGTGGTGTCTGGGATGCACGTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCAAAGGCAGTGTCAGTGTaGGTGGTGTCAGCCTGCAAG +
Preference number: 5 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPKAVSV*VVSACK
Trigger: CTTGCAGGCTGACACCACCAACACTGACACTGCCTT...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp TCAGGACACGGGTGCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCTTTAAGCGTTCAATaGTCCGCTCTTTCTCTGCAA +
Preference number: 5 (lower is better)
Translates to: SGHGCWQGRQPLGGVQGKPLSVQ*SALSLQ
Trigger: TTGCAGAGAAAGAGCGGACAATTGAACGCTTAAAGG...TTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGCACCCGTGTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGTTTTCCACCTGTTCCTaGTGCTTCAGATTTGCTACC +
Preference number: 5 (lower is better)
Translates to: PRRIRGSRSWQRVVRCPMFSTCS*CFRFAT
Trigger: GGTAGCAAATCTGAAGCACAAGGAACAGGTGGAAAA...CATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp CTGCCCTACAGCACGAAGGCCACGTTTATTACTGAACTCCTAGCCAGCCTCCAGGGTCATGGCAGAGGGTaGTCAGGTGTCCAATGTACA +
Preference number: 5 (lower is better)
Translates to: LPYSTKATFITELLASLQGHGRG*SGVQCT
Trigger: TGTACATTGGACACCTGACAACCCTCTGCCATGACC...CTGGAGGCTGGCTAGGAGTTCAGTAATAAACGTGGCCTTCGTGCTGTAGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGGGACAAGGTCATGGCAGAGGGTaGTCAGGTGTCCAATGTACA +
Preference number: 5 (lower is better)
Translates to: GQEDSSRALTTCSRMSGQGHGRG*SGVQCT
Trigger: TGTACATTGGACACCTGACAACCCTCTGCCATGACC...TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp AGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATTCCTGCAGTTCTGCATaGTCCCGTTCACCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: RQGWMKTQTLGERVLPSHSCSSA*SRSPFS
Trigger: AGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGA...ATGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCTCCTGCAGTTCTGCATaGTCCCGTTCACCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFSCSSA*SRSPFS
Trigger: AGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGA...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp TGCGACAGACAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTTCCTGCAGTTCTGCATaGTCCCGTTCACCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: CDRQAGLDEDSDLGRTSASCSSA*SRSPFS
Trigger: AGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGA...AGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTGTCTGTCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp GTACATGCAGATGTCAGGAAATGGCCACCCACAAGTAGATACTCAGAGCCCCTCAAGGCAGGCAGCCTCTaGGAGGTGTTCAGGGGAAAC +
Preference number: 5 (lower is better)
Translates to: VHADVRKWPPTSRYSEPLKAGSL*EVFRGN
Trigger: GTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTT...GAGGGGCTCTGAGTATCTACTTGTGGGTGGCCATTTCCTGACATCTGCATGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GGAGAGAGCAGCTGGCCAGTGCCCGTGCCAGACCACTTGTTTAGGCATGGCCTCAATACCTTCATTGATTaGCAGTCTTGGGGTCAGCTT +
Preference number: 5 (lower is better)
Translates to: GESSWPVPVPDHLFRHGLNTFID*QSWGQL
Trigger: AAGCTGACCCCAAGACTGCAAATCAATGAAGGTATT...GAGGCCATGCCTAAACAAGTGGTCTGGCACGGGCACTGGCCAGCTGCTCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGACACTGAAGGCGGCCTaGGGTCCAGTCTGCTTTACA +
Preference number: 5 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLTLKAA*GPVCFT
Trigger: TGTAAAGCAGACTGGACCCAAGGCCGCCTTCAGTGT...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACACTGAAGGCGGCCTaGGGTCCAGTCTGCTTTACA +
Preference number: 5 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTTLKAA*GPVCFT
Trigger: TGTAAAGCAGACTGGACCCAAGGCCGCCTTCAGTGT...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGTTCAATGGACAGAAATaGAGGGGCAAGTCACAATGC +
Preference number: 5 (lower is better)
Translates to: ARQAASWRCSGETSPRATFNGQK*RGKSQC
Trigger: GCATTGTGACTTGCCCCTCAATTTCTGTCCATTGAA...CGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TGCGACAGACAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTAGATTCTCGTTCCTTTaGCTCGGCAGGTGTCTCTTG +
Preference number: 5 (lower is better)
Translates to: CDRQAGLDEDSDLGRTSARFSFL*LGRCLL
Trigger: CAAGAGACACCTGCCGAGCAAAAGGAACGAGAATCT...AGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTGTCTGTCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS GCA 90 bp AGTTCTCCTCTGTCAGCTCTGCTACACAAGGTTCGCCAGTCCTGCTaGTACTATCCTGCTGAAACAGCTGATTCAGGTCCCTCTGGATCC +
Preference number: 5 (lower is better)
Translates to: SSPLSALLHKVRQSC*YYPAETADSGPSGS
Trigger: GGATCCAGAGGGACCTGAATCAGCTGTTTCAGCAGGATAGTAGCAGCAGGACTGGCGAACCTTGTGTAGCAGAGCTGACAGAGGAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000538971.6
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
ENST00000592048.5
CDS-3UTR CAA 90 bp CAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCACCCAGCTGTCCAATCTaGAAGAAGTATCTTACACCA +
Preference number: 5 (lower is better)
Translates to: QAGLDEDSDLGRTSAPKPPSCPI*KKYLTP
Trigger: TGGTGTAAGATACTTCTTCAAGATTGGACAGCTGGG...TGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGTACACACTTCCATACATGGTaGCAAGGTCAGGAAAGGTGT +
Preference number: 5 (lower is better)
Translates to: GGSGGLGHGRGLSGVQCTHFHTW*QGQERC
Trigger: ACACCTTTCCTGACCTTGCAACCATGTATGGAAGTG...TGTACATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp ACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCCACTTCCATACATGGTaGCAAGGTCAGGAAAGGTGT +
Preference number: 5 (lower is better)
Translates to: TSGFPIKQGQEDSSRALTHFHTW*QGQERC
Trigger: ACACCTTTCCTGACCTTGCAACCATGTATGGAAGTG...GGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp CGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGTACGGGCTCCAGAAGGTCTaGATGCTATTCATTGAAGAA +
Preference number: 5 (lower is better)
Translates to: RRIRGSRSWQRVVRCPMYGLQKV*MLFIEE
Trigger: TTCTTCAATGAATAGCATCAAGACCTTCTGGAGCCC...GTACATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCAAGAAGAAACAGCTCTTaGGCCTGCCGCTCATGCTCA +
Preference number: 5 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPRRNSS*ACRSCS
Trigger: TGAGCATGAGCGGCAGGCCAAAGAGCTGTTTCTTCT...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGTCTTCCTCGGTAGCCTaGGCAGAAAGTCCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLSSSVA*AESPLL
Trigger: GAGCAAAGGACTTTCTGCCAAGGCTACCGAGGAAGA...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp TTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTCCTCTGCCAGTCGTCTaGTTCTCTCATGGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: FPIKQGQEDSSRALTTCSPLPVV*FSHGLP
Trigger: AGGAAGACCATGAGAGAACAAGACGACTGGCAGAGG...AGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
CDS-3UTR CAA 90 bp TGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCCTCTGCCAGTCGTCTaGTTCTCTCATGGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: WFHSHVRGQEVRGSSAPWPLPVV*FSHGLP
Trigger: AGGAAGACCATGAGAGAACAAGACGACTGGCAGAGG...CCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGATTGCTAGATTCATCTTaGTACCTGGTGATCTCTCTC +
Preference number: 5 (lower is better)
Translates to: QRTGGERLLCSMALCQGRLLDSS*YLVISL
Trigger: GAGAGAGATCACCAGGTACAAAGATGAATCTAGCAA...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp GCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGTTGCTAGATTCATCTTaGTACCTGGTGATCTCTCTC +
Preference number: 5 (lower is better)
Translates to: ARQAASWRCSGETSPRATLLDSS*YLVISL
Trigger: GAGAGAGATCACCAGGTACAAAGATGAATCTAGCAA...CGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGTACAACTTCTGCCTGGGCCTaGCTAGATTCATCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: GGSGGLGHGRGLSGVQCTTSAWA*LDSSLY
Trigger: GTACAAAGATGAATCTAGCAAGGCCCAGGCAGAAGT...TGTACATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCACTTCTGCCTGGGCCTaGCTAGATTCATCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFTSAWA*LDSSLY
Trigger: GTACAAAGATGAATCTAGCAAGGCCCAGGCAGAAGT...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp CTAACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGGAGCTGTCGTTGAGATaGTCCTCCCGTCGTCGCGCC +
Preference number: 5 (lower is better)
Translates to: LTPQYDNVNSLKQERLVEELSLR*SSRRRA
Trigger: GGCGCGACGACGGGAGGACAATCTCAACGACAGCTC...CTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACGAGCTGTCGTTGAGATaGTCCTCCCGTCGTCGCGCC +
Preference number: 5 (lower is better)
Translates to: TPQYDNVNSLKQERLVENELSLR*SSRRRA
Trigger: GGCGCGACGACGGGAGGACAATCTCAACGACAGCTC...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp CATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCATGTCAGAGCTGTCGTTGAGATaGTCCTCCCGTCGTCGCGCC +
Preference number: 5 (lower is better)
Translates to: HPLSLLNSKSIPGFILMSELSLR*SSRRRA
Trigger: GGCGCGACGACGGGAGGACAATCTCAACGACAGCTC...TGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp AGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATACCTGTTTTTCAGCATaGGTCCTGGCTGATTCCTCT +
Preference number: 5 (lower is better)
Translates to: RQGWMKTQTLGERVLPSHTCFSA*VLADSS
Trigger: AGAGGAATCAGCCAGGACCAATGCTGAAAAACAGGT...ATGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCACCTGTTTTTCAGCATaGGTCCTGGCTGATTCCTCT +
Preference number: 5 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFTCFSA*VLADSS
Trigger: AGAGGAATCAGCCAGGACCAATGCTGAAAAACAGGT...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp AGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATAGCCAGAAGAGCTTCTaGCTTCATCTCCAGAACTTC +
Preference number: 5 (lower is better)
Translates to: RQGWMKTQTLGERVLPSHSQKSF*LHLQNF
Trigger: GAAGTTCTGGAGATGAAGCAAGAAGCTCTTCTGGCT...ATGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp AGAGCCACCAGCTCCCACAGTTCTCCACTGCTGATGACCAGGTGGCAGTTCTTCAGCCAGAAGAGCTTCTaGCTTCATCTCCAGAACTTC +
Preference number: 5 (lower is better)
Translates to: RATSSHSSPLLMTRWQFFSQKSF*LHLQNF
Trigger: GAAGTTCTGGAGATGAAGCAAGAAGCTCTTCTGGCT...GAAGAACTGCCACCTGGTCATCAGCAGTGGAGAACTGTGGGAGCTGGTGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp GTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGGGCAGCCACTTCCTCTaGGGTCTTCTTCTTAGAGGA +
Preference number: 5 (lower is better)
Translates to: VGTMVCYLLKNGVGKLLQGSHFL*GLLLRG
Trigger: TCCTCTAAGAAGAAGACCCAAGAGGAAGTGGCTGCC...CTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp GCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGGGGCTTGTGATTTGTTaGATTGGAATGGGAGGATTT +
Preference number: 5 (lower is better)
Translates to: ARQAASWRCSGETSPRATGLVIC*IGMGGF
Trigger: AAATCCTCCCATTCCAATCAAACAAATCACAAGCCC...CGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CCTGGGTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCTCCTGCAGTTCTGCATaGTCCCGTTCACCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: PGLTTSGFPIKQGQEDSSSCSSA*SRSPFS
Trigger: AGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGA...GGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAACCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp GGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGACTCTTCCAGGGCGTaGACCACTTGCTCTAGGATG +
Preference number: 5 (lower is better)
Translates to: GCRDNGLLSAEEWRWQTPDSSRA*TTCSRM
Trigger: CATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTC...AGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCGACTCTTCCAGGGCGTaGACCACTTGCTCTAGGATG +
Preference number: 5 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFDSSRA*TTCSRM
Trigger: CATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTC...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp GGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTGACTCTTCCAGGGCGTaGACCACTTGCTCTAGGATG +
Preference number: 5 (lower is better)
Translates to: GPLEASSQPVELQVHSWFDSSRA*TTCSRM
Trigger: CATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTC...AAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp CATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTATAGGAGACTCTTCCAGGGCGTaGACCACTTGCTCTAGGATG +
Preference number: 5 (lower is better)
Translates to: HLLQLILPSRLVIVQVIGDSSRA*TTCSRM
Trigger: CATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTC...TCCTATAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTTTCTTGGCTCCTGGGTaGACTACCTCAGGCTTCCCC +
Preference number: 5 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVFLAPG*TTSGFP
Trigger: GGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAA...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCTTCTTGGCTCCTGGGTaGACTACCTCAGGCTTCCCC +
Preference number: 5 (lower is better)
Translates to: YLLKNGVGKLLQFCIVPFFLAPG*TTSGFP
Trigger: GGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAA...GAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp GTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCCGTAGTTCTCTTTTCTaGGCTCCTGGGTTGACTACC +
Preference number: 5 (lower is better)
Translates to: VDYLRLPHKAGSRGLFQGRSSLF*APGLTT
Trigger: GGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACG...GCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp GTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCCATCCTCTCAGCCTGTaGAACTCCAAGTCCATTCCT +
Preference number: 5 (lower is better)
Translates to: VDYLRLPHKAGSRGLFQGHPLSL*NSKSIP
Trigger: AGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG...GCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000588412.5
CDS-3UTR CAA 90 bp CCTGGGTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCCATCCTCTCAGCCTGTaGAACTCCAAGTCCATTCCT +
Preference number: 5 (lower is better)
Translates to: PGLTTSGFPIKQGQEDSSHPLSL*NSKSIP
Trigger: AGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG...GGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAACCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000588412.5
CDS-3UTR CAA 90 bp TTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTATGAAGACTCAGACCTaGGGAGAACGAGTGCTCCCA +
Preference number: 5 (lower is better)
Translates to: FPIKQGQEDSSRALTTCSMKTQT*GERVLP
Trigger: TGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCAT...AGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000588412.5
CDS-3UTR CAA 90 bp GTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGATGAAGACTCAGACCTaGGGAGAACGAGTGCTCCCA +
Preference number: 5 (lower is better)
Translates to: VGTMVCYLLKNGVGKLLQMKTQT*GERVLP
Trigger: TGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCAT...CTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000588412.5
CDS-3UTR CAA 90 bp GTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCCCTCACACCATCTTCTaGTTAACTGGCCGAGGAACA +
Preference number: 5 (lower is better)
Translates to: VDYLRLPHKAGSRGLFQGPHTIF*LTGRGT
Trigger: TGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGG...GCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000588412.5
CDS-3UTR CAA 90 bp GTTCTGCATTGTCCCGTTCACCTTTCTCTAACTCATCCTGAAGCTGCCCCCGGGCCTCACACCATCTTCTaGTTAACTGGCCGAGGAACA +
Preference number: 5 (lower is better)
Translates to: VLHCPVHLSLTHPEAAPGPHTIF*LTGRGT
Trigger: TGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGG...CCCGGGGGCAGCTTCAGGATGAGTTAGAGAAAGGTGAACGGGACAATGCAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000588412.5
CDS-3UTR CAA 90 bp CCGTGCCAGACCACTTGTTTAGGCATGGCCTCGCCTGCTGTCTTGGTTCCACCGAATACCTTCATTGATTaGCAGTCTTGGGGTCAGCTT +
Preference number: 5 (lower is better)
Translates to: PCQTTCLGMASPAVLVPPNTFID*QSWGQL
Trigger: AAGCTGACCCCAAGACTGCAAATCAATGAAGGTATT...CGGTGGAACCAAGACAGCAGGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TGCTATTTACTGCTTCAACTCCAGCAGGTATGTCTCACAGAATCCACTACATCTGCCTCGCCTGCTGTCTaGGTTCCACCGTGGCCCCGT +
Preference number: 5 (lower is better)
Translates to: CYLLLQLQQVCLTESTTSASPAV*VPPWPR
Trigger: ACGGGGCCACGGTGGAACCAAGACAGCAGGCGAGGC...AGATGTAGTGGATTCTGTGAGACATACCTGCTGGAGTTGAAGCAGTAAATAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCCCCGTGCCAGACCACTaGTTTAGGCATGGCCTCGCC +
Preference number: 5 (lower is better)
Translates to: EKAPIVILEHSALWSIGGPVPDH*FRHGLA
Trigger: GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGG...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCAACGATGGGAGTGGGACATTaGGTTAAGTGTTGGTTCAAT +
Preference number: 5 (lower is better)
Translates to: ARQAASWRCSGETSPRATMGVGH*VKCWFN
Trigger: ATTGAACCAACACTTAACCAAATGTCCCACTCCCAT...CGTTGCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GTACATGCAGATGTCAGGAAATGGCCACCCACAAGTAGATACTCAGAGCCCCTCAAAGGGCAACTAGACTaGCCGATGGAGGGGTTTGGG +
Preference number: 5 (lower is better)
Translates to: VHADVRKWPPTSRYSEPLKGQLD*PMEGFG
Trigger: CCCAAACCCCTCCATCGGCAAGTCTAGTTGCCCTTT...GAGGGGCTCTGAGTATCTACTTGTGGGTGGCCATTTCCTGACATCTGCATGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATATGGTGACATTGGTTaGGGGTGCAGATCTTTAGGT +
Preference number: 5 (lower is better)
Translates to: QAGLDEDSDLGRTSAPKPYGDIG*GCRSLG
Trigger: ACCTAAAGATCTGCACCCCAAACCAATGTCACCATA...TGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp ACACACCTTAAGATCGGGGAGGGGAAGGACATGCTATTTACTGCTTCAACTCCAGGGGTTTTTGCCATCTaGGCCAGGCTGGCCTCGAAC +
Preference number: 5 (lower is better)
Translates to: THLKIGEGKDMLFTASTPGVFAI*ARLASN
Trigger: GTTCGAGGCCAGCCTGGCCAAGATGGCAAAAACCCC...TGGAGTTGAAGCAGTAAATAGCATGTCCTTCCCCTCCCCGATCTTAAGGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS GCA 90 bp GTATATTTTCCATTGAAAGGGTTTTCCCACTGCCACCTCCAACACTaGTTCCCGAACTCCCTCCCGTACTGTTGGTTCGACGGTGACCCA +
Preference number: 5 (lower is better)
Translates to: VYFPLKGFSHCHLQH*FPNSLPYCWFDGDP
Trigger: TGGGTCACCGTCGAACCAACAGTACGGGAGGGAGTTCGGGAAGCAGTGTTGGAGGTGGCAGTGGGAAAACCCTTTCAATGGAAAATATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545318.2
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000589132.1
ENST00000611180.4
CDS CCA 90 bp GTGTTTCTAGCTTTGTCTGCAGGGCGAGTAGTTCTGTGTCCTTTCTaGACAGCTCCTGTTTCACCTGGCCAATGGCAAAGACCTCAGCCT +
Preference number: 5 (lower is better)
Translates to: VFLALSAGRVVLCPF*TAPVSPGQWQRPQP
Trigger: AGGCTGAGGTCTTTGCCATTGGCCAGGTGAAACAGGAGCTGTCCAGAAAGGACACAGAACTACTCGCCCTGCAGACAAAGCTAGAAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536573.6
CDS-3UTR CAA 90 bp GTGCTGCCCTCAGGATGTGTAGCTGCAGTAGATGGATGCAATACTGGCGTGGTGCACTTCCATACATGGTaGCAAGGTCAGGAAAGGTGT +
Preference number: 5 (lower is better)
Translates to: VLPSGCVAAVDGCNTGVVHFHTW*QGQERC
Trigger: ACACCTTTCCTGACCTTGCAACCATGTATGGAAGTG...CACCACGCCAGTATTGCATCCATCTACTGCAGCTACACATCCTGAGGGCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CTAACTCATCCTGAAGCTGCCCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGCACTTCCATACATGGTaGCAAGGTCAGGAAAGGTGT +
Preference number: 5 (lower is better)
Translates to: LTHPEAAPGSSSAAHSPKHFHTW*QGQERC
Trigger: ACACCTTTCCTGACCTTGCAACCATGTATGGAAGTG...CTTGGGAGAATGAGCTGCAGAAGATGACCCGGGGGCAGCTTCAGGATGAGTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCCACTGCTAGCTATATaGGGGCTACTACCCATAGCA +
Preference number: 5 (lower is better)
Translates to: WFHSHVRGQEVRGSSAPWPLLAI*GLLPIA
Trigger: TGCTATGGGTAGTAGCCCCAATATAGCTAGCAGTGG...CCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCACCACTGCTAGCTATATaGGGGCTACTACCCATAGCA +
Preference number: 5 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPPLLAI*GLLPIA
Trigger: TGCTATGGGTAGTAGCCCCAATATAGCTAGCAGTGG...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp GTTTCCTCTCACAGGGAGAGGGATTGTTTCACAGCAGGGAGTAGGGGGAGCTGGTTGGCAGAAAGTCCTTaGCTCTGCAACATTTCCAGA +
Preference number: 5 (lower is better)
Translates to: VSSHRERDCFTAGSRGSWLAESP*LCNISR
Trigger: TCTGGAAATGTTGCAGAGCAAAGGACTTTCTGCCAA...CCAGCTCCCCCTACTCCCTGCTGTGAAACAATCCCTCTCCCTGTGAGAGGAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTATAGGATCTTCCTCGGTAGCCTaGGCAGAAAGTCCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: HLLQLILPSRLVIVQVIGSSSVA*AESPLL
Trigger: GAGCAAAGGACTTTCTGCCAAGGCTACCGAGGAAGA...TCCTATAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
CDS-3UTR CAA 90 bp GGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTTCTTCCTCGGTAGCCTaGGCAGAAAGTCCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: GCRDNGLLSAEEWRWQTPSSSVA*AESPLL
Trigger: GAGCAAAGGACTTTCTGCCAAGGCTACCGAGGAAGA...AGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
CDS-3UTR CAA 90 bp GGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCCTCTGCCAGTCGTCTaGTTCTCTCATGGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: GPLEASSQPVELQVHSWFPLPVV*FSHGLP
Trigger: AGGAAGACCATGAGAGAACAAGACGACTGGCAGAGG...AAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp TGCGACAGACAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCAGTTTGCAGAGCTTTaGTTTTGGCAGAATCAGGAG +
Preference number: 5 (lower is better)
Translates to: CDRQAGLDEDSDLGRTSAQFAEL*FWQNQE
Trigger: CTCCTGATTCTGCCAAAACAAAAGCTCTGCAAACTG...AGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTGTCTGTCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGTACAACATCCAACATGTCCTaGAGGTCATGTATCTCTCCA +
Preference number: 5 (lower is better)
Translates to: GGSGGLGHGRGLSGVQCTTSNMS*RSCISP
Trigger: TGGAGAGATACATGACCTCAAGGACATGTTGGATGT...TGTACATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp CAGGCGCTGCACCTGATGAGAAAGTCCACGTGGGTGGGATCTGGGCCACCTGCTGTCTCTAAGCTGCTCTaGAAGATTTTCAATCTTCTT +
Preference number: 5 (lower is better)
Translates to: QALHLMRKSTWVGSGPPAVSKLL*KIFNLL
Trigger: AAGAAGATTGAAAATCTTCAAGAGCAGCTTAGAGAC...AGCAGGTGGCCCAGATCCCACCCACGTGGACTTTCTCATCAGGTGCAGCGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GCTGCCCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTGTCTCTAAGCTGCTCTaGAAGATTTTCAATCTTCTT +
Preference number: 5 (lower is better)
Translates to: AAPGSSSAAHSPKPPGHRVSKLL*KIFNLL
Trigger: AAGAAGATTGAAAATCTTCAAGAGCAGCTTAGAGAC...ACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCGGGGGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp CGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCATCAGCCTGCAAGGATTaGACCCGTTCTTTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: RAPVPRSSLFLAPGLTTSSACKD*TRSFKL
Trigger: CAGCTTGAAAGAACGGGTCAAATCCTTGCAGGCTGA...TGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp GCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTAACTCAAAGGCAGTGTCAGTGTaGGTGGTGTCAGCCTGCAAG +
Preference number: 5 (lower is better)
Translates to: ALANSCSSALSRSPFSNSKAVSV*VVSACK
Trigger: CTTGCAGGCTGACACCACCAACACTGACACTGCCTT...TGAGTTAGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp CCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTGGTTTGGGGTGCAGATCTTAAGGCAGTGTCAGTGTaGGTGGTGTCAGCCTGCAAG +
Preference number: 5 (lower is better)
Translates to: PTLLRALFMVTLVWGADLKAVSV*VVSACK
Trigger: CTTGCAGGCTGACACCACCAACACTGACACTGCCTT...AAGATCTGCACCCCAAACCAATGTCACCATAAAGAGGGCACGAAGAAGAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp ACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCCCTTTAAGCGTTCAATaGTCCGCTCTTTCTCTGCAA +
Preference number: 5 (lower is better)
Translates to: TSGFPIKQGQEDSSRALTPLSVQ*SALSLQ
Trigger: TTGCAGAGAAAGAGCGGACAATTGAACGCTTAAAGG...GGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCACTTCTGCCTGGGCCTaGCTAGATTCATCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: SFSCQRTGGERLLCSMALTSAWA*LDSSLY
Trigger: GTACAAAGATGAATCTAGCAAGGCCCAGGCAGAAGT...GAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp GTGCTGCCCTCAGGATGTGTAGCTGCAGTAGATGGATGCAATACTGGCGTGGTGACTTCTGCCTGGGCCTaGCTAGATTCATCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: VLPSGCVAAVDGCNTGVVTSAWA*LDSSLY
Trigger: GTACAAAGATGAATCTAGCAAGGCCCAGGCAGAAGT...CACCACGCCAGTATTGCATCCATCTACTGCAGCTACACATCCTGAGGGCAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACAGAGCTGTCGTTGAGATaGTCCTCCCGTCGTCGCGCC +
Preference number: 5 (lower is better)
Translates to: RFDPLSTLDIKKVSVETTELSLR*SSRRRA
Trigger: GGCGCGACGACGGGAGGACAATCTCAACGACAGCTC...TGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp GGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGGGACAAAGCCAGAAGAGCTTCTaGCTTCATCTCCAGAACTTC +
Preference number: 5 (lower is better)
Translates to: GQEDSSRALTTCSRMSGQSQKSF*LHLQNF
Trigger: GAAGTTCTGGAGATGAAGCAAGAAGCTCTTCTGGCT...TTGTCCCGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp AGGGTCACGCTATGTTGCCCTGGCTGGTGCTCTTTCAACCTCACATGTTCTTCAGGCAGCCACTTCCTCTaGGGTCTTCTTCTTAGAGGA +
Preference number: 5 (lower is better)
Translates to: RVTLCCPGWCSFNLTCSSGSHFL*GLLLRG
Trigger: TCCTCTAAGAAGAAGACCCAAGAGGAAGTGGCTGCC...TGAAGAACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACATAGCGTGACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp GTGGAGAACACCTCACACCATCTTCTTGTTAACTGGCCGAGGAACAGAGTGAGGGGCAGCCACTTCCTCTaGGGTCTTCTTCTTAGAGGA +
Preference number: 5 (lower is better)
Translates to: VENTSHHLLVNWPRNRVRGSHFL*GLLLRG
Trigger: TCCTCTAAGAAGAAGACCCAAGAGGAAGTGGCTGCC...CCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGGTGTTCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp GGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTGGCAGCCACTTCCTCTaGGGTCTTCTTCTTAGAGGA +
Preference number: 5 (lower is better)
Translates to: GPLEASSQPVELQVHSWFGSHFL*GLLLRG
Trigger: TCCTCTAAGAAGAAGACCCAAGAGGAAGTGGCTGCC...AAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCGGCAGCCACTTCCTCTaGGGTCTTCTTCTTAGAGGA +
Preference number: 5 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLGSHFL*GLLLRG
Trigger: TCCTCTAAGAAGAAGACCCAAGAGGAAGTGGCTGCC...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp GGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGGTCATGGCAGAGGGTaGTCAGGTGTCCAATGTACA +
Preference number: 5 (lower is better)
Translates to: GCRDNGLLSAEEWRWQTPGHGRG*SGVQCT
Trigger: TGTACATTGGACACCTGACAACCCTCTGCCATGACC...AGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp GATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGAGGGCTTCCTGGTCATGGCAGAGGGTaGTCAGGTGTCCAATGTACA +
Preference number: 5 (lower is better)
Translates to: DIGPGNASSQKQCHRGLPGHGRG*SGVQCT
Trigger: TGTACATTGGACACCTGACAACCCTCTGCCATGACC...AGGAAGCCCTCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTGACTCTTCCAGGGCGTaGACCACTTGCTCTAGGATG +
Preference number: 5 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSDSSRA*TTCSRM
Trigger: CATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTC...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp GAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTGACTCTTCCAGGGCGTaGACCACTTGCTCTAGGATG +
Preference number: 5 (lower is better)
Translates to: EEWRWQTPAVLHCPVHLSDSSRA*TTCSRM
Trigger: CATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTC...AGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp AAACCCCGTTGGGATCACACCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTGACTCTTCCAGGGCGTaGACCACTTGCTCTAGGATG +
Preference number: 5 (lower is better)
Translates to: KPRWDHTHSSSCPLYGDIDSSRA*TTCSRM
Trigger: CATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTC...AATGTCACCATAAAGAGGGCACGAAGAAGAGTGGGTGTGATCCCAACGGGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTCGTAGTTCTCTTTTCTaGGCTCCTGGGTTGACTACC +
Preference number: 5 (lower is better)
Translates to: LVHWRHPLSLLNSKSIPGRSSLF*APGLTT
Trigger: GGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACG...ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp CTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTCATCCTCTCAGCCTGTaGAACTCCAAGTCCATTCCT +
Preference number: 5 (lower is better)
Translates to: LVHWRHPLSLLNSKSIPGHPLSL*NSKSIP
Trigger: AGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG...ACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp AGGGTCACGCTATGTTGCCCTGGCTGGTGCTCTTTCAACCTCACATGTTCTTCAATGAAGACTCAGACCTaGGGAGAACGAGTGCTCCCA +
Preference number: 5 (lower is better)
Translates to: RVTLCCPGWCSFNLTCSSMKTQT*GERVLP
Trigger: TGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCAT...TGAAGAACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACATAGCGTGACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp GTTTCCTCTCACAGGGAGAGGGATTGTTTCACAGCAGGGAGTAGGGGGAGCTGGATGCCAATACCTTCATaGATTTGCAGTCTTGGGGTC +
Preference number: 5 (lower is better)
Translates to: VSSHRERDCFTAGSRGSWMPIPS*ICSLGV
Trigger: GACCCCAAGACTGCAAATCAATGAAGGTATTGGCAT...CCAGCTCCCCCTACTCCCTGCTGTGAAACAATCCCTCTCCCTGTGAGAGGAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATATGCCAATACCTTCATaGATTTGCAGTCTTGGGGTC +
Preference number: 5 (lower is better)
Translates to: RQGWMKTQTLGERVLPSHMPIPS*ICSLGV
Trigger: GACCCCAAGACTGCAAATCAATGAAGGTATTGGCAT...ATGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp ACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCATGCCAATACCTTCATaGATTTGCAGTCTTGGGGTC +
Preference number: 5 (lower is better)
Translates to: TSGFPIKQGQEDSSRALTMPIPS*ICSLGV
Trigger: GACCCCAAGACTGCAAATCAATGAAGGTATTGGCAT...GGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355446.9
ENST00000440394.7
CDS-3UTR CAA 90 bp AGGAAGCATCTCAGTAAGAGGTTTATGAGCAGAGTCCATTTAACCTTCGATAAGGCCTCGCCTGCTGTCTaGGTTCCACCGTGGCCCCGT +
Preference number: 5 (lower is better)
Translates to: RKHLSKRFMSRVHLTFDKASPAV*VPPWPR
Trigger: ACGGGGCCACGGTGGAACCAAGACAGCAGGCGAGGC...CTTATCGAAGGTTAAATGGACTCTGCTCATAAACCTCTTACTGAGATGCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACCCCGTGCCAGACCACTaGTTTAGGCATGGCCTCGCC +
Preference number: 5 (lower is better)
Translates to: LSTWFTGTAMNRIEVTDHPVPDH*FRHGLA
Trigger: GGCGAGGCCATGCCTAAACAAGTGGTCTGGCACGGG...GTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGGGTCAAGAAGATTCCTaGCTGTTCACAGAGACCAGA +
Preference number: 5 (lower is better)
Translates to: KQGQEDSSRALTTCSRMSGQEDS*LFTETR
Trigger: TCTGGTCTCTGTGAACAGCAAGGAATCTTCTTGACC...CGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440394.7
CDS-3UTR CAA 90 bp AGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCCAAGCCATTATGGTGACATTGGTTaGGGGTGCAGATCTTTAGGT +
Preference number: 5 (lower is better)
Translates to: RQGWMKTQTLGERVLPSHYGDIG*GCRSLG
Trigger: ACCTAAAGATCTGCACCCCAAACCAATGTCACCATA...ATGGCTTGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGAGTTACAAAACCCCGTaGGGATCACACCCACTCTTC +
Preference number: 5 (lower is better)
Translates to: WFHSHVRGQEVRGSSAPWSYKTP*GSHPLF
Trigger: GAAGAGTGGGTGTGATCCCAACGGGGTTTTGTAACT...CCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCAAGTTACAAAACCCCGTaGGGATCACACCCACTCTTC +
Preference number: 5 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPSYKTP*GSHPLF
Trigger: GAAGAGTGGGTGTGATCCCAACGGGGTTTTGTAACT...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GCTGGCAAGGCAGGCAGCCTCTTGGAGGTGTTCAGGGGAAACCAGCCCAAGAGCCCTTGCAAATCTCAATaGAGATACCTCATCAATGAT +
Preference number: 5 (lower is better)
Translates to: AGKAGSLLEVFRGNQPKSPCKSQ*RYLIND
Trigger: ATCATTGATGAGGTATCTCAATTGAGATTTGCAAGG...GCTCTTGGGCTGGTTTCCCCTGAACACCTCCAAGAGGCTGCCTGCCTTGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGGGTTTTTGCCATCTaGGCCAGGCTGGCCTCGAAC +
Preference number: 5 (lower is better)
Translates to: DGRCRNGAGITLLQVSKLGVFAI*ARLASN
Trigger: GTTCGAGGCCAGCCTGGCCAAGATGGCAAAAACCCC...CAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AAGGCTGTTATCACACCGCAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTCCCAGAGGGCCTGCTTaGGCCGGGGTGAATTCTCTG +
Preference number: 5 (lower is better)
Translates to: KAVITPQFFTLWWIKRDAPRGPA*AGVNSL
Trigger: CAGAGAATTCACCCCGGCCAAAGCAGGCCCTCTGGG...AGCATCTCGCTTTATCCACCATAACGTAAAGAACTGCGGTGTGATAACAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS GCA 90 bp GCTCGGCTCCACCTTCCCAACAGAGCGGGCACTTCCATACATGGTTaGAAGGTCAGGAAAGGTGTGAGCAGAAAATCAACAACAACAACA +
Preference number: 5 (lower is better)
Translates to: ARLHLPNRAGTSIHG*KVRKGVSRKSTTTT
Trigger: TGTTGTTGTTGTTGATTTTCTGCTCACACCTTTCCTGACCTTGCAACCATGTATGGAAGTGCCCGCTCTGTTGGGAAGGTGGAGCCGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545318.2
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000589132.1
ENST00000611180.4
CDS GCA 90 bp TACAGTGGATGCCATACTCACAGGAGGGAGGTGATGCTCTCCAAATaGTATGGTGTCACTAGCAACCCCACTGCTAGCTATATTGGGGCT +
Preference number: 5 (lower is better)
Translates to: YSGCHTHRREVMLSK*YGVTSNPTASYIGA
Trigger: AGCCCCAATATAGCTAGCAGTGGGGTTGCTAGTGACACCATAGCATTTGGAGAGCATCACCTCCCTCCTGTGAGTATGGCATCCACTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000589132.1
ENST00000611180.4
CDS GCA 90 bp GATTGTGTTATCTCTCGCCTGACGAAGGGAGTGAGGTACAGTGGATaGCATACTCACAGGAGGGAGGTGATGCTCTCCAAATGCTATGGT +
Preference number: 5 (lower is better)
Translates to: DCVISRLTKGVRYSG*HTHRREVMLSKCYG
Trigger: ACCATAGCATTTGGAGAGCATCACCTCCCTCCTGTGAGTATGGCATCCACTGTACCTCACTCCCTTCGTCAGGCGAGAGATAACACAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS CCA 90 bp CCTGGTGATCTCTCTCTCCAAGTGCTGTATTCGGTCACTCATCTCTaGACTGGCTCTGGCTTCCAATGCTGCCTCATGTGCCTTTTTCAA +
Preference number: 5 (lower is better)
Translates to: PGDLSLQVLYSVTHL*TGSGFQCCLMCLFQ
Trigger: TTGAAAAAGGCACATGAGGCAGCATTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACCGAATACAGCACTTGGAGAGAGAGATCACCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000536573.6
ENST00000538971.6
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS CCA 90 bp TCACATACTGTCACACATTTACGCTGTCACACGCAGCCGCCCTTCTaGGAGACAGGAAGAGAACGCTGGCTTCATATATTCACACCAGAC +
Preference number: 5 (lower is better)
Translates to: SHTVTHLRCHTQPPF*ETGRERWLHIFTPD
Trigger: GTCTGGTGTGAATATATGAAGCCAGCGTTCTCTTCCTGTCTCCCAGAAGGGCGGCTGCGTGTGACAGCGTAAATGTGTGACAGTATGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543151.1
CDS-3UTR CAA 90 bp TCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCCCCAGCTGTCCAATCTaGAAGAAGTATCTTACACCA +
Preference number: 5 (lower is better)
Translates to: SFSCQRTGGERLLCSMALPSCPI*KKYLTP
Trigger: TGGTGTAAGATACTTCTTCAAGATTGGACAGCTGGG...GAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp CCCCGGGTCATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGATTGTATATTTTCCATaGAAAGGGTTTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: PRVIFCSSFSQAAWSSSKIVYFP*KGFSHC
Trigger: GCAGTGGGAAAACCCTTTCAATGGAAAATATACAAT...CTTGGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp CCACGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGATTGAAGAACTCAATTaGCTCTCCTTTACTTCCACA +
Preference number: 5 (lower is better)
Translates to: PRRIRGSRSWQRVVRCPMIEELN*LSFTST
Trigger: TGTGGAAGTAAAGGAGAGCAAATTGAGTTCTTCAAT...CATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCCGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp CAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGTCAGGGCAGAATTGAAGAACTCAATTaGCTCTCCTTTACTTCCACA +
Preference number: 5 (lower is better)
Translates to: QRTGGERLLCSMALCQGRIEELN*LSFTST
Trigger: TGTGGAAGTAAAGGAGAGCAAATTGAGTTCTTCAAT...TCTGCCCTGACAGAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp TCCAGCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGAGAAGAAACAGCTCTTaGGCCTGCCGCTCATGCTCA +
Preference number: 5 (lower is better)
Translates to: SSRYVSQNPLHLSLTEKWRRNSS*ACRSCS
Trigger: TGAGCATGAGCGGCAGGCCAAAGAGCTGTTTCTTCT...CCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGAGAAGAAACAGCTCTTaGGCCTGCCGCTCATGCTCA +
Preference number: 5 (lower is better)
Translates to: EMLTLLPFSAGSFLHGLRRRNSS*ACRSCS
Trigger: TGAGCATGAGCGGCAGGCCAAAGAGCTGTTTCTTCT...CCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCAGAAGAAACAGCTCTTaGGCCTGCCGCTCATGCTCA +
Preference number: 5 (lower is better)
Translates to: YLLKNGVGKLLQFCIVPFRRNSS*ACRSCS
Trigger: TGAGCATGAGCGGCAGGCCAAAGAGCTGTTTCTTCT...GAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
CDS-3UTR CAA 90 bp GAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGTCTTCCTCGGTAGCCTaGGCAGAAAGTCCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: EMLTLLPFSAGSFLHGLRSSSVA*AESPLL
Trigger: GAGCAAAGGACTTTCTGCCAAGGCTACCGAGGAAGA...CCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TATGCTAGAAGAAGGTTCCAGGCAATGCACGAGGCTGAGGTTCAGAGAAGACGACCTCTGCCAGTCGTCTaGTTCTCTCATGGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: YARRRFQAMHEAEVQRRRPLPVV*FSHGLP
Trigger: AGGAAGACCATGAGAGAACAAGACGACTGGCAGAGG...TCGTCTTCTCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTCTTCTAGCATA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTACCTCTGCCAGTCGTCTaGTTCTCTCATGGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: EWRWQTPAVLHCPVHLSLPLPVV*FSHGLP
Trigger: AGGAAGACCATGAGAGAACAAGACGACTGGCAGAGG...TAGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
CDS-3UTR CAA 90 bp TCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTGCAGAGCTTTTGTTTaGGCAGAATCAGGAGCATTC +
Preference number: 5 (lower is better)
Translates to: SFSCQRTGGERLLCSMALCRAFV*AESGAF
Trigger: GAATGCTCCTGATTCTGCCAAAACAAAAGCTCTGCA...GAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp GTGCTGCCCTCAGGATGTGTAGCTGCAGTAGATGGATGCAATACTGGCGTGGTGCAGTTTGCAGAGCTTTaGTTTTGGCAGAATCAGGAG +
Preference number: 5 (lower is better)
Translates to: VLPSGCVAAVDGCNTGVVQFAEL*FWQNQE
Trigger: CTCCTGATTCTGCCAAAACAAAAGCTCTGCAAACTG...CACCACGCCAGTATTGCATCCATCTACTGCAGCTACACATCCTGAGGGCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CTGCCCTACAGCACGAAGGCCACGTTTATTACTGAACTCCTAGCCAGCCTCCAGACATCCAACATGTCCTaGAGGTCATGTATCTCTCCA +
Preference number: 5 (lower is better)
Translates to: LPYSTKATFITELLASLQTSNMS*RSCISP
Trigger: TGGAGAGATACATGACCTCAAGGACATGTTGGATGT...CTGGAGGCTGGCTAGGAGTTCAGTAATAAACGTGGCCTTCGTGCTGTAGGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTATAGGATCAGCCTGCAAGGATTaGACCCGTTCTTTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: HLLQLILPSRLVIVQVIGSACKD*TRSFKL
Trigger: CAGCTTGAAAGAACGGGTCAAATCCTTGCAGGCTGA...TCCTATAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp ACACACCTTAAGATCGGGGAGGGGAAGGACATGCTATTTACTGCTTCAACTCCAGGGCCTCCTCCAAAGTaGTCAAGGCAGTGTCAGTGT +
Preference number: 5 (lower is better)
Translates to: THLKIGEGKDMLFTASTPGPPPK*SRQCQC
Trigger: ACACTGACACTGCCTTGACAACTTTGGAGGAGGCCC...TGGAGTTGAAGCAGTAAATAGCATGTCCTTCCCCTCCCCGATCTTAAGGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACTTCTGCCTGGGCCTaGCTAGATTCATCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTTSAWA*LDSSLY
Trigger: GTACAAAGATGAATCTAGCAAGGCCCAGGCAGAAGT...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TGCGACAGACAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTATTCTGGTCTTTCACTaGCCTTTCCAACTCAGCTAT +
Preference number: 5 (lower is better)
Translates to: CDRQAGLDEDSDLGRTSAILVFH*PFQLSY
Trigger: ATAGCTGAGTTGGAAAGGCAAGTGAAAGACCAGAAT...AGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTGTCTGTCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGAGCTGTCGTTGAGATaGTCCTCCCGTCGTCGCGCC +
Preference number: 5 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVELSLR*SSRRRA
Trigger: GGCGCGACGACGGGAGGACAATCTCAACGACAGCTC...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp TCTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGACCTGTTTTTCAGCATaGGTCCTGGCTGATTCCTCT +
Preference number: 5 (lower is better)
Translates to: SGPLEASSQPVELQVHSWTCFSA*VLADSS
Trigger: AGAGGAATCAGCCAGGACCAATGCTGAAAAACAGGT...CCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp CTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTATAGGAAGCTGGTGGAGTACCTGTTTTTCAGCATaGGTCCTGGCTGATTCCTCT +
Preference number: 5 (lower is better)
Translates to: LILPSRLVIVQVIGSWWSTCFSA*VLADSS
Trigger: AGAGGAATCAGCCAGGACCAATGCTGAAAAACAGGT...ACTCCACCAGCTTCCTATAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000440394.7
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp GTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGAGCCAGAAGAGCTTCTaGCTTCATCTCCAGAACTTC +
Preference number: 5 (lower is better)
Translates to: VGTMVCYLLKNGVGKLLQSQKSF*LHLQNF
Trigger: GAAGTTCTGGAGATGAAGCAAGAAGCTCTTCTGGCT...CTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp CTAGGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTGGTCATGGCAGAGGGTaGTCAGGTGTCCAATGTACA +
Preference number: 5 (lower is better)
Translates to: LGCRDNGLLSAEEWRWQTGHGRG*SGVQCT
Trigger: TGTACATTGGACACCTGACAACCCTCTGCCATGACC...AGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTGGTCATGGCAGAGGGTaGTCAGGTGTCCAATGTACA +
Preference number: 5 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSGHGRG*SGVQCT
Trigger: TGTACATTGGACACCTGACAACCCTCTGCCATGACC...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTGGTCATGGCAGAGGGTaGTCAGGTGTCCAATGTACA +
Preference number: 5 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVGHGRG*SGVQCT
Trigger: TGTACATTGGACACCTGACAACCCTCTGCCATGACC...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp GAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTGGTCATGGCAGAGGGTaGTCAGGTGTCCAATGTACA +
Preference number: 5 (lower is better)
Translates to: EEWRWQTPAVLHCPVHLSGHGRG*SGVQCT
Trigger: TGTACATTGGACACCTGACAACCCTCTGCCATGACC...AGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp CCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACCGTAGTTCTCTTTTCTaGGCTCCTGGGTTGACTACC +
Preference number: 5 (lower is better)
Translates to: PAFQCWELSTWFTGTAMNRSSLF*APGLTT
Trigger: GGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACG...GTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GTACATGCAGATGTCAGGAAATGGCCACCCACAAGTAGATACTCAGAGCCCCTCCGTAGTTCTCTTTTCTaGGCTCCTGGGTTGACTACC +
Preference number: 5 (lower is better)
Translates to: VHADVRKWPPTSRYSEPLRSSLF*APGLTT
Trigger: GGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACG...GAGGGGCTCTGAGTATCTACTTGTGGGTGGCCATTTCCTGACATCTGCATGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CCTGGGTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCTCAAGGATGGATGACTaGCACACAGTAGGCATTTCA +
Preference number: 5 (lower is better)
Translates to: PGLTTSGFPIKQGQEDSSSRMDD*HTVGIS
Trigger: TGAAATGCCTACTGTGTGCAAGTCATCCATCCTTGA...GGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAACCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
CDS-3UTR CAA 90 bp GTCTTGGTTCCACCGTGGCCCCGTGAAGGCTGTTATCACACCGCAGTTCTTTACTCAAGGATGGATGACTaGCACACAGTAGGCATTTCA +
Preference number: 5 (lower is better)
Translates to: VLVPPWPREGCYHTAVLYSRMDD*HTVGIS
Trigger: TGAAATGCCTACTGTGTGCAAGTCATCCATCCTTGA...GTAAAGAACTGCGGTGTGATAACAGCCTTCACGGGGCCACGGTGGAACCAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GTGCTGCCCTCAGGATGTGTAGCTGCAGTAGATGGATGCAATACTGGCGTGGTGTCAAGGATGGATGACTaGCACACAGTAGGCATTTCA +
Preference number: 5 (lower is better)
Translates to: VLPSGCVAAVDGCNTGVVSRMDD*HTVGIS
Trigger: TGAAATGCCTACTGTGTGCAAGTCATCCATCCTTGA...CACCACGCCAGTATTGCATCCATCTACTGCAGCTACACATCCTGAGGGCAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp ACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCATGGGAGTGGGACATTaGGTTAAGTGTTGGTTCAAT +
Preference number: 5 (lower is better)
Translates to: TSGFPIKQGQEDSSRALTMGVGH*VKCWFN
Trigger: ATTGAACCAACACTTAACCAAATGTCCCACTCCCAT...GGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440394.7
CDS-3UTR CAA 90 bp AAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATCGGGGTTTTTGCCATCTaGGCCAGGCTGGCCTCGAAC +
Preference number: 5 (lower is better)
Translates to: KAPIVILEHSALWSIGGIGVFAI*ARLASN
Trigger: GTTCGAGGCCAGCCTGGCCAAGATGGCAAAAACCCC...GATGCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CTTGGGGTCAGCTTTCTGATTTGCAACATGAAGCTGGCTGAATTCCACGAGGTAAAGACTCTGAGGGTCTaGACACCGGGCCTACACTCA +
Preference number: 5 (lower is better)
Translates to: LGVSFLICNMKLAEFHEVKTLRV*TPGLHS
Trigger: TGAGTGTAGGCCCGGTGTCAAGACCCTCAGAGTCTT...TACCTCGTGGAATTCAGCCAGCTTCATGTTGCAAATCAGAAAGCTGACCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACCAGGGTCCGCTGGGCTaGAGAAATGCCATGTGGTGT +
Preference number: 5 (lower is better)
Translates to: TPQYDNVNSLKQERLVENQGPLG*RNAMWC
Trigger: ACACCACATGGCATTTCTCAAGCCCAGCGGACCCTG...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GTGCACGTGCATCCCAGACACCACCATGGAGGCTGCTACTGTTACCAAAAGGAAACAGGGCCACAGCACTaGCCAAACACATTGGAAAAA +
Preference number: 5 (lower is better)
Translates to: VHVHPRHHHGGCYCYQKETGPQH*PNTLEK
Trigger: TTTTTCCAATGTGTTTGGCAAGTGCTGTGGCCCTGT...TTCCTTTTGGTAACAGTAGCAGCCTCCATGGTGGTGTCTGGGATGCACGTGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS GCA 90 bp TCCTCCAAAGTTGTCAAGGCAGTGTCAGTGTTGGTGGTGTCAGCCTaGAAGGATTTGACCCGTTCTTTCAAGCTGCTCATCTGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: SSKVVKAVSVLVVSA*KDLTRSFKLLICFS
Trigger: GGAAAAGCAGATGAGCAGCTTGAAAGAACGGGTCAAATCCTTGCAGGCTGACACCACCAACACTGACACTGCCTTGACAACTTTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000536573.6
ENST00000538971.6
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCACCCAGCTGTCCAATCTaGAAGAAGTATCTTACACCA +
Preference number: 5 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPPSCPI*KKYLTP
Trigger: TGGTGTAAGATACTTCTTCAAGATTGGACAGCTGGG...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp TGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCACACTTCCATACATGGTaGCAAGGTCAGGAAAGGTGT +
Preference number: 5 (lower is better)
Translates to: CRDNGLLSAEEWRWQTPAHFHTW*QGQERC
Trigger: ACACCTTTCCTGACCTTGCAACCATGTATGGAAGTG...TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCCCACTGCTAGCTATATaGGGGCTACTACCCATAGCA +
Preference number: 5 (lower is better)
Translates to: WRHPLSLLNSKSIPGFILPLLAI*GLLPIA
Trigger: TGCTATGGGTAGTAGCCCCAATATAGCTAGCAGTGG...GAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp GTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGGGGCTCCAGAAGGTCTaGATGCTATTCATTGAAGAA +
Preference number: 5 (lower is better)
Translates to: VGTMVCYLLKNGVGKLLQGLQKV*MLFIEE
Trigger: TTCTTCAATGAATAGCATCAAGACCTTCTGGAGCCC...CTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp CCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACACCCCTCTGCCAGTCGTCTaGTTCTCTCATGGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: PQYDNVNSLKQERLVENTPLPVV*FSHGLP
Trigger: AGGAAGACCATGAGAGAACAAGACGACTGGCAGAGG...GGTGTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTTGCAGAGCTTTTGTTTaGGCAGAATCAGGAGCATTC +
Preference number: 5 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTCRAFV*AESGAF
Trigger: GAATGCTCCTGATTCTGCCAAAACAAAAGCTCTGCA...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp CGGAGGATCAGGGGGTCTCGGTCATGGCAGAGGGTTGTCAGGTGTCCAATGTACGTCTCTAAGCTGCTCTaGAAGATTTTCAATCTTCTT +
Preference number: 5 (lower is better)
Translates to: RRIRGSRSWQRVVRCPMYVSKLL*KIFNLL
Trigger: AAGAAGATTGAAAATCTTCAAGAGCAGCTTAGAGAC...GTACATTGGACACCTGACAACCCTCTGCCATGACCGAGACCCCCTGATCCTCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTCAGCCTGCAAGGATTaGACCCGTTCTTTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSSACKD*TRSFKL
Trigger: CAGCTTGAAAGAACGGGTCAAATCCTTGCAGGCTGA...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp ATGAGACACTCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGTCAGCCTGCAAGGATTaGACCCGTTCTTTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: MRHSESYKLHPLCPTARRSACKD*TRSFKL
Trigger: CAGCTTGAAAGAACGGGTCAAATCCTTGCAGGCTGA...CCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGAGTGTCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACAAGGCAGTGTCAGTGTaGGTGGTGTCAGCCTGCAAG +
Preference number: 5 (lower is better)
Translates to: TPQYDNVNSLKQERLVENKAVSV*VVSACK
Trigger: CTTGCAGGCTGACACCACCAACACTGACACTGCCTT...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AAAGCTGCAGGCGGGGACAACAGGGTCTCATATGTCAACTTTGTATGTTCTCTTGGGCCTCCTCCAAAGTaGTCAAGGCAGTGTCAGTGT +
Preference number: 5 (lower is better)
Translates to: KAAGGDNRVSYVNFVCSLGPPPK*SRQCQC
Trigger: ACACTGACACTGCCTTGACAACTTTGGAGGAGGCCC...AAGAGAACATACAAAGTTGACATATGAGACCCTGTTGTCCCCGCCTGCAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGGCCTCCTCCAAAGTaGTCAAGGCAGTGTCAGTGT +
Preference number: 5 (lower is better)
Translates to: DGRCRNGAGITLLQVSKLGPPPK*SRQCQC
Trigger: ACACTGACACTGCCTTGACAACTTTGGAGGAGGCCC...CAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp CGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCACCTTTAAGCGTTCAATaGTCCGCTCTTTCTCTGCAA +
Preference number: 5 (lower is better)
Translates to: RAPVPRSSLFLAPGLTTSPLSVQ*SALSLQ
Trigger: TTGCAGAGAAAGAGCGGACAATTGAACGCTTAAAGG...TGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCCTTTAAGCGTTCAATaGTCCGCTCTTTCTCTGCAA +
Preference number: 5 (lower is better)
Translates to: WFHSHVRGQEVRGSSAPWPLSVQ*SALSLQ
Trigger: TTGCAGAGAAAGAGCGGACAATTGAACGCTTAAAGG...CCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp CGGGTCATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTATTGCTAGATTCATCTTaGTACCTGGTGATCTCTCTC +
Preference number: 5 (lower is better)
Translates to: RVIFCSSFSQAAWSSSKLLLDSS*YLVISL
Trigger: GAGAGAGATCACCAGGTACAAAGATGAATCTAGCAA...TAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTTGCTAGATTCATCTTaGTACCTGGTGATCTCTCTC +
Preference number: 5 (lower is better)
Translates to: SFSCQRTGGERLLCSMALLLDSS*YLVISL
Trigger: GAGAGAGATCACCAGGTACAAAGATGAATCTAGCAA...GAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp CCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACACTTCTGCCTGGGCCTaGCTAGATTCATCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: PAFQCWELSTWFTGTAMNTSAWA*LDSSLY
Trigger: GTACAAAGATGAATCTAGCAAGGCCCAGGCAGAAGT...GTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCACTTCTGCCTGGGCCTaGCTAGATTCATCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLTSAWA*LDSSLY
Trigger: GTACAAAGATGAATCTAGCAAGGCCCAGGCAGAAGT...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGTTTTCCACCTGTTCCTaGTGCTTCAGATTTGCTACC +
Preference number: 5 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLFSTCS*CFRFAT
Trigger: GGTAGCAAATCTGAAGCACAAGGAACAGGTGGAAAA...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp GTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTTTCCACCTGTTCCTaGTGCTTCAGATTTGCTACC +
Preference number: 5 (lower is better)
Translates to: VGTMVCYLLKNGVGKLLQFSTCS*CFRFAT
Trigger: GGTAGCAAATCTGAAGCACAAGGAACAGGTGGAAAA...CTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp CCATGCAGTATTAGGCACACTGAGCTAGAACCCACGTCGGGTGAGGGTGGTTATTTTTCCACCTGTTCCTaGTGCTTCAGATTTGCTACC +
Preference number: 5 (lower is better)
Translates to: PCSIRHTELEPTSGEGGYFSTCS*CFRFAT
Trigger: GGTAGCAAATCTGAAGCACAAGGAACAGGTGGAAAA...ATAACCACCCTCACCCGACGTGGGTTCTAGCTCAGTGTGCCTAATACTGCATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TCTGGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTTCCACCTGTTCCTaGTGCTTCAGATTTGCTACC +
Preference number: 5 (lower is better)
Translates to: SGPLEASSQPVELQVHSWFSTCS*CFRFAT
Trigger: GGTAGCAAATCTGAAGCACAAGGAACAGGTGGAAAA...CCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTGAGCTGTCGTTGAGATaGTCCTCCCGTCGTCGCGCC +
Preference number: 5 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGELSLR*SSRRRA
Trigger: GGCGCGACGACGGGAGGACAATCTCAACGACAGCTC...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp GGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTAGCCAGAAGAGCTTCTaGCTTCATCTCCAGAACTTC +
Preference number: 5 (lower is better)
Translates to: GPLEASSQPVELQVHSWFSQKSF*LHLQNF
Trigger: GAAGTTCTGGAGATGAAGCAAGAAGCTCTTCTGGCT...AAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCGGCAGCCACTTCCTCTaGGGTCTTCTTCTTAGAGGA +
Preference number: 5 (lower is better)
Translates to: AERQSKMADVETVLESHFGSHFL*GLLLRG
Trigger: TCCTCTAAGAAGAAGACCCAAGAGGAAGTGGCTGCC...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCGACTCTTCCAGGGCGTaGACCACTTGCTCTAGGATG +
Preference number: 5 (lower is better)
Translates to: EKAPIVILEHSALWSIGGDSSRA*TTCSRM
Trigger: CATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTC...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp AAAGCTGCAGGCGGGGACAACAGGGTCTCATATGTCAACTTTGTATGTTCTCTTGACTCTTCCAGGGCGTaGACCACTTGCTCTAGGATG +
Preference number: 5 (lower is better)
Translates to: KAAGGDNRVSYVNFVCSLDSSRA*TTCSRM
Trigger: CATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTC...AAGAGAACATACAAAGTTGACATATGAGACCCTGTTGTCCCCGCCTGCAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTACGTAGTTCTCTTTTCTaGGCTCCTGGGTTGACTACC +
Preference number: 5 (lower is better)
Translates to: EWRWQTPAVLHCPVHLSLRSSLF*APGLTT
Trigger: GGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACG...TAGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp GTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCGTAGTTCTCTTTTCTaGGCTCCTGGGTTGACTACC +
Preference number: 5 (lower is better)
Translates to: VCYLLKNGVGKLLQFCIVRSSLF*APGLTT
Trigger: GGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACG...GACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCCCTCACACCATCTTCTaGTTAACTGGCCGAGGAACA +
Preference number: 5 (lower is better)
Translates to: WRHPLSLLNSKSIPGFILPHTIF*LTGRGT
Trigger: TGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGG...GAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp CGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGCCTCACACCATCTTCTaGTTAACTGGCCGAGGAACA +
Preference number: 5 (lower is better)
Translates to: RDANTPAFQCWELSTWFTPHTIF*LTGRGT
Trigger: TGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGG...CGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTGGTTTGGGGTGCAGATCTTCCTCACACCATCTTCTaGTTAACTGGCCGAGGAACA +
Preference number: 5 (lower is better)
Translates to: PTLLRALFMVTLVWGADLPHTIF*LTGRGT
Trigger: TGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGG...AAGATCTGCACCCCAAACCAATGTCACCATAAAGAGGGCACGAAGAAGAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCAATACCTTCATTGATTaGCAGTCTTGGGGTCAGCTT +
Preference number: 5 (lower is better)
Translates to: SFSCQRTGGERLLCSMALNTFID*QSWGQL
Trigger: AAGCTGACCCCAAGACTGCAAATCAATGAAGGTATT...GAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AGGGTCACGCTATGTTGCCCTGGCTGGTGCTCTTTCAACCTCACATGTTCTTCAGGTCAAGAAGATTCCTaGCTGTTCACAGAGACCAGA +
Preference number: 5 (lower is better)
Translates to: RVTLCCPGWCSFNLTCSSGQEDS*LFTETR
Trigger: TCTGGTCTCTGTGAACAGCAAGGAATCTTCTTGACC...TGAAGAACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACATAGCGTGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGACACTGAAGGCGGCCTaGGGTCCAGTCTGCTTTACA +
Preference number: 5 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVTLKAA*GPVCFT
Trigger: TGTAAAGCAGACTGGACCCAAGGCCGCCTTCAGTGT...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCGTCACAATGCCCTTCTaGACACTGAAGGCGGCCTTG +
Preference number: 5 (lower is better)
Translates to: EKAPIVILEHSALWSIGGVTMPF*TLKAAL
Trigger: CAAGGCCGCCTTCAGTGTCAAGAAGGGCATTGTGAC...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCAAGACTCTGAGGGTCTaGACACCGGGCCTACACTCA +
Preference number: 5 (lower is better)
Translates to: EKAPIVILEHSALWSIGGKTLRV*TPGLHS
Trigger: TGAGTGTAGGCCCGGTGTCAAGACCCTCAGAGTCTT...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTGGTTTGGGGTGCAGATCTTAGCGGTCTTCTCTGCTaGGCTCTTTCCTCAAAGACT +
Preference number: 5 (lower is better)
Translates to: PTLLRALFMVTLVWGADLSGLLC*ALSSKT
Trigger: AGTCTTTGAGGAAAGAGCCAAGCAGAGAAGACCGCT...AAGATCTGCACCCCAAACCAATGTCACCATAAAGAGGGCACGAAGAAGAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACCAGGGTCCGCTGGGCTaGAGAAATGCCATGTGGTGT +
Preference number: 5 (lower is better)
Translates to: LSTWFTGTAMNRIEVTDHQGPLG*RNAMWC
Trigger: ACACCACATGGCATTTCTCAAGCCCAGCGGACCCTG...GTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGTTAAATTACTGGTATTaGCTGACACAGGGTCCGCTG +
Preference number: 5 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLLNYWY*LTQGPL
Trigger: CAGCGGACCCTGTGTCAGCAAATACCAGTAATTTAA...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GCAGTTGTATGCCCATATGAAACCATGACCACTAGGAGAGGGGCATGGAATGACAGATTCTCGTTCCTTTaGCTCGGCAGGTGTCTCTTG +
Preference number: 5 (lower is better)
Translates to: AVVCPYETMTTRRGAWNDRFSFL*LGRCLL
Trigger: CAAGAGACACCTGCCGAGCAAAAGGAACGAGAATCT...GTCATTCCATGCCCCTCTCCTAGTGGTCATGGTTTCATATGGGCATACAACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS GCA 90 bp GCCTTGCTAGATTCATCTTTGTACCTGGTGATCTCTCTCTCCAAGTaGTGTATTCGGTCACTCATCTCTGGACTGGCTCTGGCTTCCAAT +
Preference number: 5 (lower is better)
Translates to: ALLDSSLYLVISLSK*CIRSLISGLALASN
Trigger: ATTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACCGAATACAGCACTTGGAGAGAGAGATCACCAGGTACAAAGATGAATCTAGCAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000536573.6
ENST00000538971.6
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS CCA 90 bp CTCTCTCCAAGTGCTGTATTCGGTCACTCATCTCTGGACTGGCTCTaGCTTCCAATGCTGCCTCATGTGCCTTTTTCAATTGTGATTCCA +
Preference number: 5 (lower is better)
Translates to: LSPSAVFGHSSLDWL*LPMLPHVPFSIVIP
Trigger: TGGAATCACAATTGAAAAAGGCACATGAGGCAGCATTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACCGAATACAGCACTTGGAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000536573.6
ENST00000538971.6
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS CCA 90 bp AAGCAAGGCCTGGTATTACTTTCCACAGTAACACTGATTCCTCCTTaGACCCCCTCAGAGGACTGCTCCTGCCACGTTCCTTTATTTCTT +
Preference number: 5 (lower is better)
Translates to: KQGLVLLSTVTLIPP*TPSEDCSCHVPLFL
Trigger: AAGAAATAAAGGAACGTGGCAGGAGCAGTCCTCTGAGGGGGTCCAAGGAGGAATCAGTGTTACTGTGGAAAGTAATACCAGGCCTTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543151.1
CDS-3UTR CAA 90 bp GATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGAGGGCTTCCTCCCAGCTGTCCAATCTaGAAGAAGTATCTTACACCA +
Preference number: 5 (lower is better)
Translates to: DIGPGNASSQKQCHRGLPPSCPI*KKYLTP
Trigger: TGGTGTAAGATACTTCTTCAAGATTGGACAGCTGGG...AGGAAGCCCTCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTCACTTCCATACATGGTaGCAAGGTCAGGAAAGGTGT +
Preference number: 5 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSHFHTW*QGQERC
Trigger: ACACCTTTCCTGACCTTGCAACCATGTATGGAAGTG...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TATGCTAGAAGAAGGTTCCAGGCAATGCACGAGGCTGAGGTTCAGAGAAGACGACACTTCCATACATGGTaGCAAGGTCAGGAAAGGTGT +
Preference number: 5 (lower is better)
Translates to: YARRRFQAMHEAEVQRRRHFHTW*QGQERC
Trigger: ACACCTTTCCTGACCTTGCAACCATGTATGGAAGTG...TCGTCTTCTCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTCTTCTAGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GTTTCCTCTCACAGGGAGAGGGATTGTTTCACAGCAGGGAGTAGGGGGAGCTGGATTGTATATTTTCCATaGAAAGGGTTTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: VSSHRERDCFTAGSRGSWIVYFP*KGFSHC
Trigger: GCAGTGGGAAAACCCTTTCAATGGAAAATATACAAT...CCAGCTCCCCCTACTCCCTGCTGTGAAACAATCCCTCTCCCTGTGAGAGGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACACCCCACTGCTAGCTATATaGGGGCTACTACCCATAGCA +
Preference number: 5 (lower is better)
Translates to: PQYDNVNSLKQERLVENTPLLAI*GLLPIA
Trigger: TGCTATGGGTAGTAGCCCCAATATAGCTAGCAGTGG...GGTGTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCCCACTGCTAGCTATATaGGGGCTACTACCCATAGCA +
Preference number: 5 (lower is better)
Translates to: AERQSKMADVETVLESHFPLLAI*GLLPIA
Trigger: TGCTATGGGTAGTAGCCCCAATATAGCTAGCAGTGG...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGCCTCTGCCAGTCGTCTaGTTCTCTCATGGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVPLPVV*FSHGLP
Trigger: AGGAAGACCATGAGAGAACAAGACGACTGGCAGAGG...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCTGCAGAGCTTTTGTTTaGGCAGAATCAGGAGCATTC +
Preference number: 5 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFCRAFV*AESGAF
Trigger: GAATGCTCCTGATTCTGCCAAAACAAAAGCTCTGCA...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp TGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCACAGTTTGCAGAGCTTTaGTTTTGGCAGAATCAGGAG +
Preference number: 5 (lower is better)
Translates to: CRDNGLLSAEEWRWQTPAQFAEL*FWQNQE
Trigger: CTCCTGATTCTGCCAAAACAAAAGCTCTGCAAACTG...TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
CDS-3UTR CAA 90 bp CATCTTCTGCAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTATAGGACAGTTTGCAGAGCTTTaGTTTTGGCAGAATCAGGAG +
Preference number: 5 (lower is better)
Translates to: HLLQLILPSRLVIVQVIGQFAEL*FWQNQE
Trigger: CTCCTGATTCTGCCAAAACAAAAGCTCTGCAAACTG...TCCTATAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
CDS-3UTR CAA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCACATCCAACATGTCCTaGAGGTCATGTATCTCTCCA +
Preference number: 5 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFTSNMS*RSCISP
Trigger: TGGAGAGATACATGACCTCAAGGACATGTTGGATGT...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTCAGCCTGCAAGGATTaGACCCGTTCTTTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: AERQSKMADVETVLESHFSACKD*TRSFKL
Trigger: CAGCTTGAAAGAACGGGTCAAATCCTTGCAGGCTGA...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp AAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATCAAGGCAGTGTCAGTGTaGGTGGTGTCAGCCTGCAAG +
Preference number: 5 (lower is better)
Translates to: KAPIVILEHSALWSIGGIKAVSV*VVSACK
Trigger: CTTGCAGGCTGACACCACCAACACTGACACTGCCTT...GATGCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp AGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACAAAGGCAGTGTCAGTGTaGGTGGTGTCAGCCTGCAAG +
Preference number: 5 (lower is better)
Translates to: RFDPLSTLDIKKVSVETTKAVSV*VVSACK
Trigger: CTTGCAGGCTGACACCACCAACACTGACACTGCCTT...TGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp GTGGAGAACACCTCACACCATCTTCTTGTTAACTGGCCGAGGAACAGAGTGAGGCCTTTAAGCGTTCAATaGTCCGCTCTTTCTCTGCAA +
Preference number: 5 (lower is better)
Translates to: VENTSHHLLVNWPRNRVRPLSVQ*SALSLQ
Trigger: TTGCAGAGAAAGAGCGGACAATTGAACGCTTAAAGG...CCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGGTGTTCTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCACCTTTAAGCGTTCAATaGTCCGCTCTTTCTCTGCAA +
Preference number: 5 (lower is better)
Translates to: CRDNGLLSAEEWRWQTPAPLSVQ*SALSLQ
Trigger: TTGCAGAGAAAGAGCGGACAATTGAACGCTTAAAGG...TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGTTGCTAGATTCATCTTaGTACCTGGTGATCTCTCTC +
Preference number: 5 (lower is better)
Translates to: CQEGSGHLFLVVLFSWLLLLDSS*YLVISL
Trigger: GAGAGAGATCACCAGGTACAAAGATGAATCTAGCAA...CAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACTTCTGCCTGGGCCTaGCTAGATTCATCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: YLLKNGVGKLLQFCIVPFTSAWA*LDSSLY
Trigger: GTACAAAGATGAATCTAGCAAGGCCCAGGCAGAAGT...GAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp AGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTATTCTGGTCTTTCACTaGCCTTTCCAACTCAGCTAT +
Preference number: 5 (lower is better)
Translates to: RFRAPVPRSSLFLAPGLTILVFH*PFQLSY
Trigger: ATAGCTGAGTTGGAAAGGCAAGTGAAAGACCAGAAT...AGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCAATTCTGGTCTTTCACTaGCCTTTCCAACTCAGCTAT +
Preference number: 5 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPILVFH*PFQLSY
Trigger: ATAGCTGAGTTGGAAAGGCAAGTGAAAGACCAGAAT...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp GTGGAGAACACCTCACACCATCTTCTTGTTAACTGGCCGAGGAACAGAGTGAGGTTTTCCACCTGTTCCTaGTGCTTCAGATTTGCTACC +
Preference number: 5 (lower is better)
Translates to: VENTSHHLLVNWPRNRVRFSTCS*CFRFAT
Trigger: GGTAGCAAATCTGAAGCACAAGGAACAGGTGGAAAA...CCTCACTCTGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGGTGTTCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp GTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCCACCTGTTCCTaGTGCTTCAGATTTGCTACC +
Preference number: 5 (lower is better)
Translates to: VCSVWCQEGSGHLFLVVLFSTCS*CFRFAT
Trigger: GGTAGCAAATCTGAAGCACAAGGAACAGGTGGAAAA...GAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp AGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTACCTGTTTTTCAGCATaGGTCCTGGCTGATTCCTCT +
Preference number: 5 (lower is better)
Translates to: RMALANSCSSALSRSPFSTCFSA*VLADSS
Trigger: AGAGGAATCAGCCAGGACCAATGCTGAAAAACAGGT...AGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000355446.9
ENST00000440394.7
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp ACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCAGCCAGAAGAGCTTCTaGCTTCATCTCCAGAACTTC +
Preference number: 5 (lower is better)
Translates to: TMVCYLLKNGVGKLLQFCSQKSF*LHLQNF
Trigger: GAAGTTCTGGAGATGAAGCAAGAAGCTCTTCTGGCT...GCAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TCCAGCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGAGCCAGAAGAGCTTCTaGCTTCATCTCCAGAACTTC +
Preference number: 5 (lower is better)
Translates to: SSRYVSQNPLHLSLTEKWSQKSF*LHLQNF
Trigger: GAAGTTCTGGAGATGAAGCAAGAAGCTCTTCTGGCT...CCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCTCCAAGAGAGCTATATaGGCGTCTTTTTCACTAATG +
Preference number: 5 (lower is better)
Translates to: SFSCQRTGGERLLCSMALSKRAI*ASFSLM
Trigger: CATTAGTGAAAAAGACGCCAATATAGCTCTCTTGGA...GAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp CCTGGGTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCTCCAAGAGAGCTATATaGGCGTCTTTTTCACTAATG +
Preference number: 5 (lower is better)
Translates to: PGLTTSGFPIKQGQEDSSSKRAI*ASFSLM
Trigger: CATTAGTGAAAAAGACGCCAATATAGCTCTCTTGGA...GGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAACCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TCCTGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCAGGGCTTGTGATTTGTTaGATTGGAATGGGAGGATTT +
Preference number: 5 (lower is better)
Translates to: SWFHSHVRGQEVRGSSAPGLVIC*IGMGGF
Trigger: AAATCCTCCCATTCCAATCAAACAAATCACAAGCCC...TGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp CTCATTCTCCCAAGCCGCCTGGTCATCGTCCAAGTTATAGGAAGCTGGTGGAGTGGGCTTGTGATTTGTTaGATTGGAATGGGAGGATTT +
Preference number: 5 (lower is better)
Translates to: LILPSRLVIVQVIGSWWSGLVIC*IGMGGF
Trigger: AAATCCTCCCATTCCAATCAAACAAATCACAAGCCC...ACTCCACCAGCTTCCTATAACTTGGACGATGACCAGGCGGCTTGGGAGAATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp CATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCATGTCAGGTCATGGCAGAGGGTaGTCAGGTGTCCAATGTACA +
Preference number: 5 (lower is better)
Translates to: HPLSLLNSKSIPGFILMSGHGRG*SGVQCT
Trigger: TGTACATTGGACACCTGACAACCCTCTGCCATGACC...TGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCCGTAGTTCTCTTTTCTaGGCTCCTGGGTTGACTACC +
Preference number: 5 (lower is better)
Translates to: AERQSKMADVETVLESHFRSSLF*APGLTT
Trigger: GGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACG...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCCCTCACACCATCTTCTaGTTAACTGGCCGAGGAACA +
Preference number: 5 (lower is better)
Translates to: AERQSKMADVETVLESHFPHTIF*LTGRGT
Trigger: TGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGG...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCTCAAGGATGGATGACTaGCACACAGTAGGCATTTCA +
Preference number: 5 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFSRMDD*HTVGIS
Trigger: TGAAATGCCTACTGTGTGCAAGTCATCCATCCTTGA...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTATGCCAATACCTTCATaGATTTGCAGTCTTGGGGTC +
Preference number: 5 (lower is better)
Translates to: GPLEASSQPVELQVHSWFMPIPS*ICSLGV
Trigger: GACCCCAAGACTGCAAATCAATGAAGGTATTGGCAT...AAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TGCGACAGACAGGCAGGGCTGGATGAAGACTCAGACCTTGGGAGAACGAGTGCTCCTTGCAAATCTCAATaGAGATACCTCATCAATGAT +
Preference number: 5 (lower is better)
Translates to: CDRQAGLDEDSDLGRTSAPCKSQ*RYLIND
Trigger: ATCATTGATGAGGTATCTCAATTGAGATTTGCAAGG...AGCACTCGTTCTCCCAAGGTCTGAGTCTTCATCCAGCCCTGCCTGTCTGTCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCTTCAATGGACAGAAATaGAGGGGCAAGTCACAATGC +
Preference number: 5 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFFNGQK*RGKSQC
Trigger: GCATTGTGACTTGCCCCTCAATTTCTGTCCATTGAA...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TGCTATTTACTGCTTCAACTCCAGCAGGTATGTCTCACAGAATCCACTACATCTCAGGGTCCGCTGGGCTaGAGAAATGCCATGTGGTGT +
Preference number: 5 (lower is better)
Translates to: CYLLLQLQQVCLTESTTSQGPLG*RNAMWC
Trigger: ACACCACATGGCATTTCTCAAGCCCAGCGGACCCTG...AGATGTAGTGGATTCTGTGAGACATACCTGCTGGAGTTGAAGCAGTAAATAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS TCA 90 bp TCTTCCCTTTCCTCAGTACTCAAAGCACCATTCGATTTCAGCATCTaGATTTCCTCTTCCAGGTCTCGAAGCCCACGCTCCATAGAGGAA +
Preference number: 5 (lower is better)
Translates to: SSLSSVLKAPFDFSI*ISSSRSRSPRSIEE
Trigger: TTCCTCTATGGAGCGTGGGCTTCGAGACCTGGAAGAGGAAATTCAGATGCTGAAATCGAATGGTGCTTTGAGTACTGAGGAAAGGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000536573.6
ENST00000538971.6
ENST00000539007.5
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
ENST00000592048.5
CDS GCA 90 bp AGCCGTGAGTCCTTTTTCAGTCCTGAGGATGCCAGAGAAGAAGCATaGTCTTTCAGATCCAAAAGTGAAGCCTCTTTCTCTGAAAGGTCG +
Preference number: 5 (lower is better)
Translates to: SRESFFSPEDAREEA*SFRSKSEASFSERS
Trigger: CGACCTTTCAGAGAAAGAGGCTTCACTTTTGGATCTGAAAGAGCATGCTTCTTCTCTGGCATCCTCAGGACTGAAAAAGGACTCACGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000536573.6
ENST00000538971.6
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp AAACCCCGTTGGGATCACACCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTCCCAGCTGTCCAATCTaGAAGAAGTATCTTACACCA +
Preference number: 5 (lower is better)
Translates to: KPRWDHTHSSSCPLYGDIPSCPI*KKYLTP
Trigger: TGGTGTAAGATACTTCTTCAAGATTGGACAGCTGGG...AATGTCACCATAAAGAGGGCACGAAGAAGAGTGGGTGTGATCCCAACGGGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp ATAAAGCGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGCACTTCCATACATGGTaGCAAGGTCAGGAAAGGTGT +
Preference number: 5 (lower is better)
Translates to: IKRDANTPAFQCWELSTWHFHTW*QGQERC
Trigger: ACACCTTTCCTGACCTTGCAACCATGTATGGAAGTG...CCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCGCTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTAGGATGTCGATTGTATATTTTCCATaGAAAGGGTTTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: KQGQEDSSRALTTCSRMSIVYFP*KGFSHC
Trigger: GCAGTGGGAAAACCCTTTCAATGGAAAATATACAAT...CGACATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp CCTGGGTTGACTACCTCAGGCTTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCATTGAAGAACTCAATTaGCTCTCCTTTACTTCCACA +
Preference number: 5 (lower is better)
Translates to: PGLTTSGFPIKQGQEDSSIEELN*LSFTST
Trigger: TGTGGAAGTAAAGGAGAGCAAATTGAGTTCTTCAAT...GGAAGAGTCCTCTTGACCCTGCTTTATGGGGAAGCCTGAGGTAGTCAACCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp CGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGGCTCCAGAAGGTCTaGATGCTATTCATTGAAGAA +
Preference number: 5 (lower is better)
Translates to: RDANTPAFQCWELSTWFTGLQKV*MLFIEE
Trigger: TTCTTCAATGAATAGCATCAAGACCTTCTGGAGCCC...CGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTGGGCTCCAGAAGGTCTaGATGCTATTCATTGAAGAA +
Preference number: 5 (lower is better)
Translates to: AGMSHRIHYISPSLRSGLGLQKV*MLFIEE
Trigger: TTCTTCAATGAATAGCATCAAGACCTTCTGGAGCCC...AAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTGGGCTCCAGAAGGTCTaGATGCTATTCATTGAAGAA +
Preference number: 5 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSGLQKV*MLFIEE
Trigger: TTCTTCAATGAATAGCATCAAGACCTTCTGGAGCCC...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp AGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACAAGAAGAAACAGCTCTTaGGCCTGCCGCTCATGCTCA +
Preference number: 5 (lower is better)
Translates to: RFDPLSTLDIKKVSVETTRRNSS*ACRSCS
Trigger: TGAGCATGAGCGGCAGGCCAAAGAGCTGTTTCTTCT...TGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp AGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACATCTTCCTCGGTAGCCTaGGCAGAAAGTCCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: RFDPLSTLDIKKVSVETTSSSVA*AESPLL
Trigger: GAGCAAAGGACTTTCTGCCAAGGCTACCGAGGAAGA...TGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTTGCAGAGCTTTTGTTTaGGCAGAATCAGGAGCATTC +
Preference number: 5 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVCRAFV*AESGAF
Trigger: GAATGCTCCTGATTCTGCCAAAACAAAAGCTCTGCA...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp CTAGGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTACATCCAACATGTCCTaGAGGTCATGTATCTCTCCA +
Preference number: 5 (lower is better)
Translates to: LGCRDNGLLSAEEWRWQTTSNMS*RSCISP
Trigger: TGGAGAGATACATGACCTCAAGGACATGTTGGATGT...AGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCTCTCGTCTCTAAGCTGCTCTaGAAGATTTTCAATCTTCTT +
Preference number: 5 (lower is better)
Translates to: SFSCQRTGGERLLCSMALVSKLL*KIFNLL
Trigger: AAGAAGATTGAAAATCTTCAAGAGCAGCTTAGAGAC...GAGAGCCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCTCAGCCTGCAAGGATTaGACCCGTTCTTTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: EKAPIVILEHSALWSIGGSACKD*TRSFKL
Trigger: CAGCTTGAAAGAACGGGTCAAATCCTTGCAGGCTGA...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp TGCTATTTACTGCTTCAACTCCAGCAGGTATGTCTCACAGAATCCACTACATCTGGGCCTCCTCCAAAGTaGTCAAGGCAGTGTCAGTGT +
Preference number: 5 (lower is better)
Translates to: CYLLLQLQQVCLTESTTSGPPPK*SRQCQC
Trigger: ACACTGACACTGCCTTGACAACTTTGGAGGAGGCCC...AGATGTAGTGGATTCTGTGAGACATACCTGCTGGAGTTGAAGCAGTAAATAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGACTCTACAGACTTTAAATTCTACTTCTGCCTGGGCCTaGCTAGATTCATCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: VGSSWTDGAVLTLQTLNSTSAWA*LDSSLY
Trigger: GTACAAAGATGAATCTAGCAAGGCCCAGGCAGAAGT...AGAATTTAAAGTCTGTAGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTATTCTGGTCTTTCACTaGCCTTTCCAACTCAGCTAT +
Preference number: 5 (lower is better)
Translates to: GPLEASSQPVELQVHSWFILVFH*PFQLSY
Trigger: ATAGCTGAGTTGGAAAGGCAAGTGAAAGACCAGAAT...AAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp GCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTTTCCACCTGTTCCTaGTGCTTCAGATTTGCTACC +
Preference number: 5 (lower is better)
Translates to: AGMSHRIHYISPSLRSGLFSTCS*CFRFAT
Trigger: GGTAGCAAATCTGAAGCACAAGGAACAGGTGGAAAA...AAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTCTCTTTTCTTTTTCCACCTGTTCCTaGTGCTTCAGATTTGCTACC +
Preference number: 5 (lower is better)
Translates to: SVWCQEGSGHLFLVVLFSFSTCS*CFRFAT
Trigger: GGTAGCAAATCTGAAGCACAAGGAACAGGTGGAAAA...AGAAAAGAGAACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp CCATGCAGTATTAGGCACACTGAGCTAGAACCCACGTCGGGTGAGGGTGGTTATTCCAAGAGAGCTATATaGGCGTCTTTTTCACTAATG +
Preference number: 5 (lower is better)
Translates to: PCSIRHTELEPTSGEGGYSKRAI*ASFSLM
Trigger: CATTAGTGAAAAAGACGCCAATATAGCTCTCTTGGA...ATAACCACCCTCACCCGACGTGGGTTCTAGCTCAGTGTGCCTAATACTGCATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCGGGCTTGTGATTTGTTaGATTGGAATGGGAGGATTT +
Preference number: 5 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFGLVIC*IGMGGF
Trigger: AAATCCTCCCATTCCAATCAAACAAATCACAAGCCC...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp GGTCCATTGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTGGGCTTGTGATTTGTTaGATTGGAATGGGAGGATTT +
Preference number: 5 (lower is better)
Translates to: GPLEASSQPVELQVHSWFGLVIC*IGMGGF
Trigger: AAATCCTCCCATTCCAATCAAACAAATCACAAGCCC...AAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCAATGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp GATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGTCCTGCAGTTCTGCATaGTCCCGTTCACCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: DGRCRNGAGITLLQVSKLSCSSA*SRSPFS
Trigger: AGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGA...CAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp AGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGTCCTGCAGTTCTGCATaGTCCCGTTCACCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: RQSKMADVETVLESHFFKSCSSA*SRSPFS
Trigger: AGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGA...CTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp AGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGACTCTTCCAGGGCGTaGACCACTTGCTCTAGGATG +
Preference number: 5 (lower is better)
Translates to: SSSERFDPLSTLDIKKVSDSSRA*TTCSRM
Trigger: CATCCTAGAGCAAGTGGTCAACGCCCTGGAAGAGTC...ACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp AGGAAGCATCTCAGTAAGAGGTTTATGAGCAGAGTCCATTTAACCTTCGATAAGTTCTTGGCTCCTGGGTaGACTACCTCAGGCTTCCCC +
Preference number: 5 (lower is better)
Translates to: RKHLSKRFMSRVHLTFDKFLAPG*TTSGFP
Trigger: GGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAA...CTTATCGAAGGTTAAATGGACTCTGCTCATAAACCTCTTACTGAGATGCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CTAACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGCGTAGTTCTCTTTTCTaGGCTCCTGGGTTGACTACC +
Preference number: 5 (lower is better)
Translates to: LTPQYDNVNSLKQERLVERSSLF*APGLTT
Trigger: GGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACG...CTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGCGTAGTTCTCTTTTCTaGGCTCCTGGGTTGACTACC +
Preference number: 5 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVRSSLF*APGLTT
Trigger: GGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACG...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp AAGGCTGTTATCACACCGCAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTATGAAGACTCAGACCTaGGGAGAACGAGTGCTCCCA +
Preference number: 5 (lower is better)
Translates to: KAVITPQFFTLWWIKRDAMKTQT*GERVLP
Trigger: TGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCAT...AGCATCTCGCTTTATCCACCATAACGTAAAGAACTGCGGTGTGATAACAGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCCCTCACACCATCTTCTaGTTAACTGGCCGAGGAACA +
Preference number: 5 (lower is better)
Translates to: EKAPIVILEHSALWSIGGPHTIF*LTGRGT
Trigger: TGTTCCTCGGCCAGTTAACAAGAAGATGGTGTGAGG...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp AGGGTCACGCTATGTTGCCCTGGCTGGTGCTCTTTCAACCTCACATGTTCTTCAAATACCTTCATTGATTaGCAGTCTTGGGGTCAGCTT +
Preference number: 5 (lower is better)
Translates to: RVTLCCPGWCSFNLTCSSNTFID*QSWGQL
Trigger: AAGCTGACCCCAAGACTGCAAATCAATGAAGGTATT...TGAAGAACATGTGAGGTTGAAAGAGCACCAGCCAGGGCAACATAGCGTGACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CTAGGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTTATGGTGACATTGGTTaGGGGTGCAGATCTTTAGGT +
Preference number: 5 (lower is better)
Translates to: LGCRDNGLLSAEEWRWQTYGDIG*GCRSLG
Trigger: ACCTAAAGATCTGCACCCCAAACCAATGTCACCATA...AGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440394.7
CDS-3UTR CAA 90 bp TCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGCCACGTTTACTCTTTATGGTGACATaGGTTTGGGGTGCAGATCTT +
Preference number: 5 (lower is better)
Translates to: SESYKLHPLCPTARRPRLLFMVT*VWGADL
Trigger: AAGATCTGCACCCCAAACCAATGTCACCATAAAGAG...TAAACGTGGCCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCAGTTCTGCTCTTTATGGTGACATaGGTTTGGGGTGCAGATCTT +
Preference number: 5 (lower is better)
Translates to: DNGLLSAEEWRWQTPAVLLFMVT*VWGADL
Trigger: AAGATCTGCACCCCAAACCAATGTCACCATAAAGAG...CAGAACTGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440394.7
CDS-3UTR CAA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCAGTTACAAAACCCCGTaGGGATCACACCCACTCTTC +
Preference number: 5 (lower is better)
Translates to: EKAPIVILEHSALWSIGGSYKTP*GSHPLF
Trigger: GAAGAGTGGGTGTGATCCCAACGGGGTTTTGTAACT...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CTGCCCTACAGCACGAAGGCCACGTTTATTACTGAACTCCTAGCCAGCCTCCAGCCTTGCAAATCTCAATaGAGATACCTCATCAATGAT +
Preference number: 5 (lower is better)
Translates to: LPYSTKATFITELLASLQPCKSQ*RYLIND
Trigger: ATCATTGATGAGGTATCTCAATTGAGATTTGCAAGG...CTGGAGGCTGGCTAGGAGTTCAGTAATAAACGTGGCCTTCGTGCTGTAGGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GTGCACGTGCATCCCAGACACCACCATGGAGGCTGCTACTGTTACCAAAAGGAAAGAGCTGAGATGAATTaGGTGATTCCCATCCATATA +
Preference number: 5 (lower is better)
Translates to: VHVHPRHHHGGCYCYQKERAEMN*VIPIHI
Trigger: TATATGGATGGGAATCACCAAATTCATCTCAGCTCT...TTCCTTTTGGTAACAGTAGCAGCCTCCATGGTGGTGTCTGGGATGCACGTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TGCTATTTACTGCTTCAACTCCAGCAGGTATGTCTCACAGAATCCACTACATCTACACTGAAGGCGGCCTaGGGTCCAGTCTGCTTTACA +
Preference number: 5 (lower is better)
Translates to: CYLLLQLQQVCLTESTTSTLKAA*GPVCFT
Trigger: TGTAAAGCAGACTGGACCCAAGGCCGCCTTCAGTGT...AGATGTAGTGGATTCTGTGAGACATACCTGCTGGAGTTGAAGCAGTAAATAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp ATTTATGCTAGAAGAAGGTTCCAGGCAATGCACGAGGCTGAGGTTCAGAGAAGAAGCGGTCTTCTCTGCTaGGCTCTTTCCTCAAAGACT +
Preference number: 5 (lower is better)
Translates to: IYARRRFQAMHEAEVQRRSGLLC*ALSSKT
Trigger: AGTCTTTGAGGAAAGAGCCAAGCAGAGAAGACCGCT...TCTTCTCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTCTTCTAGCATAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACACCACAGGGCCACAGCACTaGCCAAACACATTGGAAAAA +
Preference number: 5 (lower is better)
Translates to: PQYDNVNSLKQERLVENTTGPQH*PNTLEK
Trigger: TTTTTCCAATGTGTTTGGCAAGTGCTGTGGCCCTGT...GGTGTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGAGATTCTCGTTCCTTTaGCTCGGCAGGTGTCTCTTG +
Preference number: 5 (lower is better)
Translates to: RQSKMADVETVLESHFFKRFSFL*LGRCLL
Trigger: CAAGAGACACCTGCCGAGCAAAAGGAACGAGAATCT...CTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS TCA 90 bp GTTGGTTTAAGGTTAATCAGAAGAAGGTCCCCAGCTGTCCAATCTTaGAGAAGTATCTTACACCATATCGTCCTCAGGGCTGCCGCTACT +
Preference number: 5 (lower is better)
Translates to: VGLRLIRRRSPAVQS*RSILHHIVLRAAAT
Trigger: AGTAGCGGCAGCCCTGAGGACGATATGGTGTAAGATACTTCTTCAAGATTGGACAGCTGGGGACCTTCTTCTGATTAACCTTAAACCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360905.9
ENST00000543086.7
ENST00000545948.5
CDS GCA 90 bp CTCTCATGGTCTTCCTCGGTAGCCTTGGCAGAAAGTCCTTTGCTCTaGAACATTTCCAGAAGCTTCTTAATGGATTCATCCCGAGCATTT +
Preference number: 5 (lower is better)
Translates to: LSWSSSVALAESPLL*NISRSFLMDSSRAF
Trigger: AAATGCTCGGGATGAATCCATTAAGAAGCTTCTGGAAATGTTGCAGAGCAAAGGACTTTCTGCCAAGGCTACCGAGGAAGACCATGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000538971.6
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
ENST00000592048.5
CDS GCA 90 bp TTCCGCAAGAGATCATTTTCTCTTAATACTTCCTTCAGCTGTGTCTaGAGATCCATGATTGTGTTATCTCTCGCCTACAGCTCCGCCCCT +
Preference number: 5 (lower is better)
Translates to: FRKRSFSLNTSFSCV*RSMIVLSLAYSSAP
Trigger: AGGGGCGGAGCTGTAGGCGAGAGATAACACAATCATGGATCTGCAGACACAGCTGAAGGAAGTATTAAGAGAAAATGATCTCTTGCGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592048.5
CDS-3UTR CAA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCCACTTCCATACATGGTaGCAAGGTCAGGAAAGGTGT +
Preference number: 5 (lower is better)
Translates to: EKAPIVILEHSALWSIGGHFHTW*QGQERC
Trigger: ACACCTTTCCTGACCTTGCAACCATGTATGGAAGTG...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp TGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGATTGTATATTTTCCATaGAAAGGGTTTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: WFHSHVRGQEVRGSSAPWIVYFP*KGFSHC
Trigger: GCAGTGGGAAAACCCTTTCAATGGAAAATATACAAT...CCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp TTCCCCATAAAGCAGGGTCAAGAGGACTCTTCCAGGGCGTTGACCACTTGCTCTATTGTATATTTTCCATaGAAAGGGTTTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: FPIKQGQEDSSRALTTCSIVYFP*KGFSHC
Trigger: GCAGTGGGAAAACCCTTTCAATGGAAAATATACAAT...AGAGCAAGTGGTCAACGCCCTGGAAGAGTCCTCTTGACCCTGCTTTATGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp GCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTACCACTGCTAGCTATATaGGGGCTACTACCCATAGCA +
Preference number: 5 (lower is better)
Translates to: AVLQRDSTLYLPWTSRRLPLLAI*GLLPIA
Trigger: TGCTATGGGTAGTAGCCCCAATATAGCTAGCAGTGG...TAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp GTGGGAAGTTCCTGGACTGATGGGGCTGTGCTGACTCTACAGACTTTAAATTCTGGGCTCCAGAAGGTCTaGATGCTATTCATTGAAGAA +
Preference number: 5 (lower is better)
Translates to: VGSSWTDGAVLTLQTLNSGLQKV*MLFIEE
Trigger: TTCTTCAATGAATAGCATCAAGACCTTCTGGAGCCC...AGAATTTAAAGTCTGTAGAGTCAGCACAGCCCCATCAGTCCAGGAACTTCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAAGAAGAAACAGCTCTTaGGCCTGCCGCTCATGCTCA +
Preference number: 5 (lower is better)
Translates to: SSERFDPLSTLDIKKVSVRRNSS*ACRSCS
Trigger: TGAGCATGAGCGGCAGGCCAAAGAGCTGTTTCTTCT...TACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAAGAAGAAACAGCTCTTaGGCCTGCCGCTCATGCTCA +
Preference number: 5 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVRRNSS*ACRSCS
Trigger: TGAGCATGAGCGGCAGGCCAAAGAGCTGTTTCTTCT...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp CCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACACCTTGGCAGAAAGTCCTTaGCTCTGCAACATTTCCAGA +
Preference number: 5 (lower is better)
Translates to: PQYDNVNSLKQERLVENTLAESP*LCNISR
Trigger: TCTGGAAATGTTGCAGAGCAAAGGACTTTCTGCCAA...GGTGTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACATCAGCCTGCAAGGATTaGACCCGTTCTTTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: RFDPLSTLDIKKVSVETTSACKD*TRSFKL
Trigger: CAGCTTGAAAGAACGGGTCAAATCCTTGCAGGCTGA...TGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTAAGGCAGTGTCAGTGTaGGTGGTGTCAGCCTGCAAG +
Preference number: 5 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGKAVSV*VVSACK
Trigger: CTTGCAGGCTGACACCACCAACACTGACACTGCCTT...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TCCAGCAGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGTTGCTAGATTCATCTTaGTACCTGGTGATCTCTCTC +
Preference number: 5 (lower is better)
Translates to: SSRYVSQNPLHLSLTEKWLLDSS*YLVISL
Trigger: GAGAGAGATCACCAGGTACAAAGATGAATCTAGCAA...CCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCTGCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CTAGGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTTTGCTAGATTCATCTTaGTACCTGGTGATCTCTCTC +
Preference number: 5 (lower is better)
Translates to: LGCRDNGLLSAEEWRWQTLLDSS*YLVISL
Trigger: GAGAGAGATCACCAGGTACAAAGATGAATCTAGCAA...AGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp AGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTACTTCTGCCTGGGCCTaGCTAGATTCATCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: RYVSQNPLHLSLTEKWPFTSAWA*LDSSLY
Trigger: GTACAAAGATGAATCTAGCAAGGCCCAGGCAGAAGT...AAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTTTACGATTCTGGTCTTTCACTaGCCTTTCCAACTCAGCTAT +
Preference number: 5 (lower is better)
Translates to: RDANTPAFQCWELSTWFTILVFH*PFQLSY
Trigger: ATAGCTGAGTTGGAAAGGCAAGTGAAAGACCAGAAT...CGTAAACCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AGGGTTGTCAGGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTGAGCTGTCGTTGAGATaGTCCTCCCGTCGTCGCGCC +
Preference number: 5 (lower is better)
Translates to: RVVRCPMYNFNLLLFWSSELSLR*SSRRRA
Trigger: GGCGCGACGACGGGAGGACAATCTCAACGACAGCTC...ACTTGACCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACCTGACAACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACACCTGTTTTTCAGCATaGGTCCTGGCTGATTCCTCT +
Preference number: 5 (lower is better)
Translates to: TPQYDNVNSLKQERLVENTCFSA*VLADSS
Trigger: AGAGGAATCAGCCAGGACCAATGCTGAAAAACAGGT...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp CCTGTTCCTCGTAGTTCTCTTTTCTTGGCTCCTGGGTTGACTACCTCAGGCTTCTCCAAGAGAGCTATATaGGCGTCTTTTTCACTAATG +
Preference number: 5 (lower is better)
Translates to: PVPRSSLFLAPGLTTSGFSKRAI*ASFSLM
Trigger: CATTAGTGAAAAAGACGCCAATATAGCTCTCTTGGA...GAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACGAGGAACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTCCTGCATCCAAGAGAGCTATATaGGCGTCTTTTTCACTAATG +
Preference number: 5 (lower is better)
Translates to: CRDNGLLSAEEWRWQTPASKRAI*ASFSLM
Trigger: CATTAGTGAAAAAGACGCCAATATAGCTCTCTTGGA...TGCAGGAGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TTTCAGTGCTGGGAGCTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTTCCTGCAGTTCTGCATaGTCCCGTTCACCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: FQCWELSTWFTGTAMNRISCSSA*SRSPFS
Trigger: AGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGA...AATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAGCTCCCAGCACTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CCTAGTGTGATGGGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACCATCCTCTCAGCCTGTaGAACTCCAAGTCCATTCCT +
Preference number: 5 (lower is better)
Translates to: PSVMGVGHLVKCWFNDLDHPLSL*NSKSIP
Trigger: AGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG...GTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCCCATCACACTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAATGAAGACTCAGACCTaGGGAGAACGAGTGCTCCCA +
Preference number: 5 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVMKTQT*GERVLP
Trigger: TGGGAGCACTCGTTCTCCCAAGGTCTGAGTCTTCAT...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp GCAGTTGTATGCCCATATGAAACCATGACCACTAGGAGAGGGGCATGGAATGACATGGGAGTGGGACATTaGGTTAAGTGTTGGTTCAAT +
Preference number: 5 (lower is better)
Translates to: AVVCPYETMTTRRGAWNDMGVGH*VKCWFN
Trigger: ATTGAACCAACACTTAACCAAATGTCCCACTCCCAT...GTCATTCCATGCCCCTCTCCTAGTGGTCATGGTTTCATATGGGCATACAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp ATGAGACACTCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGATGGGAGTGGGACATTaGGTTAAGTGTTGGTTCAAT +
Preference number: 5 (lower is better)
Translates to: MRHSESYKLHPLCPTARRMGVGH*VKCWFN
Trigger: ATTGAACCAACACTTAACCAAATGTCCCACTCCCAT...CCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGAGTGTCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTAAAGGGCAACTAGACTaGCCGATGGAGGGGTTTGGG +
Preference number: 5 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGKGQLD*PMEGFG
Trigger: CCCAAACCCCTCCATCGGCAAGTCTAGTTGCCCTTT...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACACCCTCTTTATGGTGACATaGGTTTGGGGTGCAGATCTT +
Preference number: 5 (lower is better)
Translates to: PQYDNVNSLKQERLVENTLFMVT*VWGADL
Trigger: AAGATCTGCACCCCAAACCAATGTCACCATAAAGAG...GGTGTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TGGTTTCATTCTCATGTCAGAGGACAGGAGGTGAGAGGCTCCTCTGCTCCATGGCCTTGCAAATCTCAATaGAGATACCTCATCAATGAT +
Preference number: 5 (lower is better)
Translates to: WFHSHVRGQEVRGSSAPWPCKSQ*RYLIND
Trigger: ATCATTGATGAGGTATCTCAATTGAGATTTGCAAGG...CCATGGAGCAGAGGAGCCTCTCACCTCCTGTCCTCTGACATGAGAATGAAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGAGGGCTTCCTAGAGCTGAGATGAATTaGGTGATTCCCATCCATATA +
Preference number: 5 (lower is better)
Translates to: DIGPGNASSQKQCHRGLPRAEMN*VIPIHI
Trigger: TATATGGATGGGAATCACCAAATTCATCTCAGCTCT...AGGAAGCCCTCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AGGAAGCATCTCAGTAAGAGGTTTATGAGCAGAGTCCATTTAACCTTCGATAAGGTCACAATGCCCTTCTaGACACTGAAGGCGGCCTTG +
Preference number: 5 (lower is better)
Translates to: RKHLSKRFMSRVHLTFDKVTMPF*TLKAAL
Trigger: CAAGGCCGCCTTCAGTGTCAAGAAGGGCATTGTGAC...CTTATCGAAGGTTAAATGGACTCTGCTCATAAACCTCTTACTGAGATGCTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTGTCACAATGCCCTTCTaGACACTGAAGGCGGCCTTG +
Preference number: 5 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGVTMPF*TLKAAL
Trigger: CAAGGCCGCCTTCAGTGTCAAGAAGGGCATTGTGAC...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GGTGGCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGTTCAATGGACAGAAATaGAGGGGCAAGTCACAATGC +
Preference number: 5 (lower is better)
Translates to: GGSSSERFDPLSTLDIKKFNGQK*RGKSQC
Trigger: GCATTGTGACTTGCCCCTCAATTTCTGTCCATTGAA...CTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTACAGGGCCACAGCACTaGCCAAACACATTGGAAAAA +
Preference number: 5 (lower is better)
Translates to: RYVSQNPLHLSLTEKWPFTGPQH*PNTLEK
Trigger: TTTTTCCAATGTGTTTGGCAAGTGCTGTGGCCCTGT...AAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp ATGAGACACTCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGTGGCTGCCCCATAGCTaGAATTCCTTTATTAACAAG +
Preference number: 5 (lower is better)
Translates to: MRHSESYKLHPLCPTARRWLPHS*NSFINK
Trigger: CTTGTTAATAAAGGAATTCAAGCTATGGGGCAGCCA...CCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGAGTGTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCTGGCTGCCCCATAGCTaGAATTCCTTTATTAACAAG +
Preference number: 5 (lower is better)
Translates to: WRHPLSLLNSKSIPGFILWLPHS*NSFINK
Trigger: CTTGTTAATAAAGGAATTCAAGCTATGGGGCAGCCA...GAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS GCA 90 bp TGTTTACTATCTGAGAACTGGTTTGTGAGTGTTTCTAGCTTTGTCTaGAGGGCGAGTAGTTCTGTGTCCTTTCTGGACAGCTCCTGTTTC +
Preference number: 5 (lower is better)
Translates to: CLLSENWFVSVSSFV*RASSSVSFLDSSCF
Trigger: GAAACAGGAGCTGTCCAGAAAGGACACAGAACTACTCGCCCTGCAGACAAAGCTAGAAACACTCACAAACCAGTTCTCAGATAGTAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000536573.6
ENST00000538971.6
ENST00000539007.5
ENST00000541503.1
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
ENST00000592048.5
CDS CCA 90 bp TTTTCCACCTCCTTCAAGATTTCTAAGAGTCGATCAACTTCTGCCTaGGCCTTGCTAGATTCATCTTTGTACCTGGTGATCTCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: FSTSFKISKSRSTSA*ALLDSSLYLVISLS
Trigger: GGAGAGAGAGATCACCAGGTACAAAGATGAATCTAGCAAGGCCCAGGCAGAAGTTGATCGACTCTTAGAAATCTTGAAGGAGGTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000536573.6
ENST00000538971.6
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS CCA 90 bp GTGTTTCTAGCTTTGTCTGCAGGGCGAGTAGTTCTGTGTCCTTTCTaGACAGCTCCTGTTTCACCTGGCCAATCTAGAAAAGAAGTAAAA +
Preference number: 5 (lower is better)
Translates to: VFLALSAGRVVLCPF*TAPVSPGQSRKEVK
Trigger: TTTTACTTCTTTTCTAGATTGGCCAGGTGAAACAGGAGCTGTCCAGAAAGGACACAGAACTACTCGCCCTGCAGACAAAGCTAGAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541503.1
CDS-3UTR CAA 90 bp GATATCGGTCCCGGAAATGCTTCTTCTCAGAAGCAGTGTCACAGAGGGCTTCCTATTGAAGAACTCAATTaGCTCTCCTTTACTTCCACA +
Preference number: 5 (lower is better)
Translates to: DIGPGNASSQKQCHRGLPIEELN*LSFTST
Trigger: TGTGGAAGTAAAGGAGAGCAAATTGAGTTCTTCAAT...AGGAAGCCCTCTGTGACACTGCTTCTGAGAAGAAGCATTTCCGGGACCGATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGGGGCTCCAGAAGGTCTaGATGCTATTCATTGAAGAA +
Preference number: 5 (lower is better)
Translates to: RQSKMADVETVLESHFFKGLQKV*MLFIEE
Trigger: TTCTTCAATGAATAGCATCAAGACCTTCTGGAGCCC...CTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCTTGGCAGAAAGTCCTTaGCTCTGCAACATTTCCAGA +
Preference number: 5 (lower is better)
Translates to: EKAPIVILEHSALWSIGGLAESP*LCNISR
Trigger: TCTGGAAATGTTGCAGAGCAAAGGACTTTCTGCCAA...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTCCTCTGCCAGTCGTCTaGTTCTCTCATGGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFPLPVV*FSHGLP
Trigger: AGGAAGACCATGAGAGAACAAGACGACTGGCAGAGG...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp GCTACGTCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCTGCAGAGCTTTTGTTTaGGCAGAATCAGGAGCATTC +
Preference number: 5 (lower is better)
Translates to: ATSLTMPIPSLICSLGVSCRAFV*AESGAF
Trigger: GAATGCTCCTGATTCTGCCAAAACAAAAGCTCTGCA...GCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGACGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTTGCAGAGCTTTTGTTTaGGCAGAATCAGGAGCATTC +
Preference number: 5 (lower is better)
Translates to: RYVSQNPLHLSLTEKWPFCRAFV*AESGAF
Trigger: GAATGCTCCTGATTCTGCCAAAACAAAAGCTCTGCA...AAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp ATTTATGCTAGAAGAAGGTTCCAGGCAATGCACGAGGCTGAGGTTCAGAGAAGAACATCCAACATGTCCTaGAGGTCATGTATCTCTCCA +
Preference number: 5 (lower is better)
Translates to: IYARRRFQAMHEAEVQRRTSNMS*RSCISP
Trigger: TGGAGAGATACATGACCTCAAGGACATGTTGGATGT...TCTTCTCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTCTTCTAGCATAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGACATCCAACATGTCCTaGAGGTCATGTATCTCTCCA +
Preference number: 5 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVTSNMS*RSCISP
Trigger: TGGAGAGATACATGACCTCAAGGACATGTTGGATGT...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp AGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTTCAGCCTGCAAGGATTaGACCCGTTCTTTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: SSSERFDPLSTLDIKKVSSACKD*TRSFKL
Trigger: CAGCTTGAAAGAACGGGTCAAATCCTTGCAGGCTGA...ACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp TTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACTCTGAAAGCTACGGGCCTCCTCCAAAGTaGTCAAGGCAGTGTCAGTGT +
Preference number: 5 (lower is better)
Translates to: LVKCWFNDLDSMRHSESYGPPPK*SRQCQC
Trigger: ACACTGACACTGCCTTGACAACTTTGGAGGAGGCCC...GTAGCTTTCAGAGTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATCACTTCTGCCTGGGCCTaGCTAGATTCATCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: KAPIVILEHSALWSIGGITSAWA*LDSSLY
Trigger: GTACAAAGATGAATCTAGCAAGGCCCAGGCAGAAGT...GATGCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp CGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTTCCACCTGTTCCTaGTGCTTCAGATTTGCTACC +
Preference number: 5 (lower is better)
Translates to: RCWNHTSSSEQVGMKFVVFSTCS*CFRFAT
Trigger: GGTAGCAAATCTGAAGCACAAGGAACAGGTGGAAAA...CACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp CTAACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGTTTTCCACCTGTTCCTaGTGCTTCAGATTTGCTACC +
Preference number: 5 (lower is better)
Translates to: LTPQYDNVNSLKQERLVEFSTCS*CFRFAT
Trigger: GGTAGCAAATCTGAAGCACAAGGAACAGGTGGAAAA...CTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp AGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACAAGCCAGAAGAGCTTCTaGCTTCATCTCCAGAACTTC +
Preference number: 5 (lower is better)
Translates to: RFDPLSTLDIKKVSVETTSQKSF*LHLQNF
Trigger: GAAGTTCTGGAGATGAAGCAAGAAGCTCTTCTGGCT...TGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp GCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAAGCCAGAAGAGCTTCTaGCTTCATCTCCAGAACTTC +
Preference number: 5 (lower is better)
Translates to: AVLQRDSTLYLPWTSRRLSQKSF*LHLQNF
Trigger: GAAGTTCTGGAGATGAAGCAAGAAGCTCTTCTGGCT...TAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp GAAGTTTGTAGTGTTTGGTGCCAAGAAGGTTCCGGGCACCTGTTCCTCGTAGTTTCCAAGAGAGCTATATaGGCGTCTTTTTCACTAATG +
Preference number: 5 (lower is better)
Translates to: EVCSVWCQEGSGHLFLVVSKRAI*ASFSLM
Trigger: CATTAGTGAAAAAGACGCCAATATAGCTCTCTTGGA...AACTACGAGGAACAGGTGCCCGGAACCTTCTTGGCACCAAACACTACAAACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp ATGACTGCTGTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATTGATTGGCAGCCACTTCCTCTaGGGTCTTCTTCTTAGAGGA +
Preference number: 5 (lower is better)
Translates to: MTAVVYATSLTMPIPSLIGSHFL*GLLLRG
Trigger: TCCTCTAAGAAGAAGACCCAAGAGGAAGTGGCTGCC...AATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAACAGCAGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TGCTATTTACTGCTTCAACTCCAGCAGGTATGTCTCACAGAATCCACTACATCTCGTAGTTCTCTTTTCTaGGCTCCTGGGTTGACTACC +
Preference number: 5 (lower is better)
Translates to: CYLLLQLQQVCLTESTTSRSSLF*APGLTT
Trigger: GGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACG...AGATGTAGTGGATTCTGTGAGACATACCTGCTGGAGTTGAAGCAGTAAATAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACCATCCTCTCAGCCTGTaGAACTCCAAGTCCATTCCT +
Preference number: 5 (lower is better)
Translates to: GVGHLVKCWFNDLDSMRHHPLSL*NSKSIP
Trigger: AGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG...GTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCTTTCTGCATCCTCTCAGCCTGTaGAACTCCAAGTCCATTCCT +
Preference number: 5 (lower is better)
Translates to: SLTMPIPSLICSLGVSFLHPLSL*NSKSIP
Trigger: AGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG...CAGAAAGCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTACATCCTCTCAGCCTGTaGAACTCCAAGTCCATTCCT +
Preference number: 5 (lower is better)
Translates to: SSERFDPLSTLDIKKVSVHPLSL*NSKSIP
Trigger: AGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG...TACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp ACACACCTTAAGATCGGGGAGGGGAAGGACATGCTATTTACTGCTTCAACTCCAAATACCTTCATTGATTaGCAGTCTTGGGGTCAGCTT +
Preference number: 5 (lower is better)
Translates to: THLKIGEGKDMLFTASTPNTFID*QSWGQL
Trigger: AAGCTGACCCCAAGACTGCAAATCAATGAAGGTATT...TGGAGTTGAAGCAGTAAATAGCATGTCCTTCCCCTCCCCGATCTTAAGGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTAACACTCCTGCCTTTCAGGGTCAAGAAGATTCCTaGCTGTTCACAGAGACCAGA +
Preference number: 5 (lower is better)
Translates to: QFFTLWWIKRDANTPAFQGQEDS*LFTETR
Trigger: TCTGGTCTCTGTGAACAGCAAGGAATCTTCTTGACC...CTGAAAGGCAGGAGTGTTAGCATCTCGCTTTATCCACCATAACGTAAAGAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACACCATGGGAGTGGGACATTaGGTTAAGTGTTGGTTCAAT +
Preference number: 5 (lower is better)
Translates to: PQYDNVNSLKQERLVENTMGVGH*VKCWFN
Trigger: ATTGAACCAACACTTAACCAAATGTCCCACTCCCAT...GGTGTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp ATTTATGCTAGAAGAAGGTTCCAGGCAATGCACGAGGCTGAGGTTCAGAGAAGATATGGTGACATTGGTTaGGGGTGCAGATCTTTAGGT +
Preference number: 5 (lower is better)
Translates to: IYARRRFQAMHEAEVQRRYGDIG*GCRSLG
Trigger: ACCTAAAGATCTGCACCCCAAACCAATGTCACCATA...TCTTCTCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTCTTCTAGCATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAAGCGGTCTTCTCTGCTaGGCTCTTTCCTCAAAGACT +
Preference number: 5 (lower is better)
Translates to: SSERFDPLSTLDIKKVSVSGLLC*ALSSKT
Trigger: AGTCTTTGAGGAAAGAGCCAAGCAGAGAAGACCGCT...TACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AGGTATGTCTCACAGAATCCACTACATCTCTCCCTCACTGAGAAGTGGCCTTTTTTAAATTACTGGTATTaGCTGACACAGGGTCCGCTG +
Preference number: 5 (lower is better)
Translates to: RYVSQNPLHLSLTEKWPFLNYWY*LTQGPL
Trigger: CAGCGGACCCTGTGTCAGCAAATACCAGTAATTTAA...AAAAGGCCACTTCTCAGTGAGGGAGAGATGTAGTGGATTCTGTGAGACATACCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAAGATTCTCGTTCCTTTaGCTCGGCAGGTGTCTCTTG +
Preference number: 5 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVRFSFL*LGRCLL
Trigger: CAAGAGACACCTGCCGAGCAAAAGGAACGAGAATCT...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAAGTTTTTCCATGGCTTaGGGATGCAACGGATTCTGC +
Preference number: 5 (lower is better)
Translates to: AVLQRDSTLYLPWTSRRLSFSMA*GCNGFC
Trigger: GCAGAATCCGTTGCATCCCAAAGCCATGGAAAAACT...TAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355446.9
CDS TCA 90 bp TTCCTTCTTCAGCTCTGGGCTCCAGAAGGTCTTGATGCTATTCATTaGAGAACTCAATTTGCTCTCCTTTACTTCCACATCCTTCCGCAA +
Preference number: 5 (lower is better)
Translates to: FLLQLWAPEGLDAIH*RTQFALLYFHILPQ
Trigger: TTGCGGAAGGATGTGGAAGTAAAGGAGAGCAAATTGAGTTCTTCAATGAATAGCATCAAGACCTTCTGGAGCCCAGAGCTGAAGAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000592048.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTCCACTGCTAGCTATATaGGGGCTACTACCCATAGCA +
Preference number: 5 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGPLLAI*GLLPIA
Trigger: TGCTATGGGTAGTAGCCCCAATATAGCTAGCAGTGG...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTCCACTGCTAGCTATATaGGGGCTACTACCCATAGCA +
Preference number: 5 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFPLLAI*GLLPIA
Trigger: TGCTATGGGTAGTAGCCCCAATATAGCTAGCAGTGG...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp CTAGGATGTCGGGACAATGGTCTGCTATCTGCTGAAGAATGGCGTTGGCAAACTATTGAAGAACTCAATTaGCTCTCCTTTACTTCCACA +
Preference number: 5 (lower is better)
Translates to: LGCRDNGLLSAEEWRWQTIEELN*LSFTST
Trigger: TGTGGAAGTAAAGGAGAGCAAATTGAGTTCTTCAAT...AGTTTGCCAACGCCATTCTTCAGCAGATAGCAGACCATTGTCCCGACATCCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp AAACCCCGTTGGGATCACACCCACTCTTCTTCGTGCCCTCTTTATGGTGACATTATTGAAGAACTCAATTaGCTCTCCTTTACTTCCACA +
Preference number: 5 (lower is better)
Translates to: KPRWDHTHSSSCPLYGDIIEELN*LSFTST
Trigger: TGTGGAAGTAAAGGAGAGCAAATTGAGTTCTTCAAT...AATGTCACCATAAAGAGGGCACGAAGAAGAGTGGGTGTGATCCCAACGGGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTAACTCAATTGAAGAACTCAATTaGCTCTCCTTTACTTCCACA +
Preference number: 5 (lower is better)
Translates to: ALANSCSSALSRSPFSNSIEELN*LSFTST
Trigger: TGTGGAAGTAAAGGAGAGCAAATTGAGTTCTTCAAT...TGAGTTAGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCATTGAAGAACTCAATTaGCTCTCCTTTACTTCCACA +
Preference number: 5 (lower is better)
Translates to: WRHPLSLLNSKSIPGFILIEELN*LSFTST
Trigger: TGTGGAAGTAAAGGAGAGCAAATTGAGTTCTTCAAT...GAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp TTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACTCTGAAAGCTACTCTTCCTCGGTAGCCTaGGCAGAAAGTCCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: LVKCWFNDLDSMRHSESYSSSVA*AESPLL
Trigger: GAGCAAAGGACTTTCTGCCAAGGCTACCGAGGAAGA...GTAGCTTTCAGAGTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACTGCAGAGCTTTTGTTTaGGCAGAATCAGGAGCATTC +
Preference number: 5 (lower is better)
Translates to: LSTWFTGTAMNRIEVTDHCRAFV*AESGAF
Trigger: GAATGCTCCTGATTCTGCCAAAACAAAAGCTCTGCA...GTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACACATCCAACATGTCCTaGAGGTCATGTATCTCTCCA +
Preference number: 5 (lower is better)
Translates to: LSTWFTGTAMNRIEVTDHTSNMS*RSCISP
Trigger: TGGAGAGATACATGACCTCAAGGACATGTTGGATGT...GTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp ATGAGACACTCTGAAAGCTACAAACTGCATCCACTCTGCCCTACAGCACGAAGGGTCTCTAAGCTGCTCTaGAAGATTTTCAATCTTCTT +
Preference number: 5 (lower is better)
Translates to: MRHSESYKLHPLCPTARRVSKLL*KIFNLL
Trigger: AAGAAGATTGAAAATCTTCAAGAGCAGCTTAGAGAC...CCTTCGTGCTGTAGGGCAGAGTGGATGCAGTTTGTAGCTTTCAGAGTGTCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AGAATGGCGTTGGCAAACTCCTGCAGTTCTGCATTGTCCCGTTCACCTTTCTCTGTCTCTAAGCTGCTCTaGAAGATTTTCAATCTTCTT +
Preference number: 5 (lower is better)
Translates to: RMALANSCSSALSRSPFSVSKLL*KIFNLL
Trigger: AAGAAGATTGAAAATCTTCAAGAGCAGCTTAGAGAC...AGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGAGTTTGCCAACGCCATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TGGAGGCATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCGTCTCTAAGCTGCTCTaGAAGATTTTCAATCTTCTT +
Preference number: 5 (lower is better)
Translates to: WRHPLSLLNSKSIPGFILVSKLL*KIFNLL
Trigger: AAGAAGATTGAAAATCTTCAAGAGCAGCTTAGAGAC...GAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATGCCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTTCAGCCTGCAAGGATTaGACCCGTTCTTTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGSACKD*TRSFKL
Trigger: CAGCTTGAAAGAACGGGTCAAATCCTTGCAGGCTGA...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp AGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACACCTTTAAGCGTTCAATaGTCCGCTCTTTCTCTGCAA +
Preference number: 5 (lower is better)
Translates to: RFDPLSTLDIKKVSVETTPLSVQ*SALSLQ
Trigger: TTGCAGAGAAAGAGCGGACAATTGAACGCTTAAAGG...TGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp GCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTACCTTTAAGCGTTCAATaGTCCGCTCTTTCTCTGCAA +
Preference number: 5 (lower is better)
Translates to: AVLQRDSTLYLPWTSRRLPLSVQ*SALSLQ
Trigger: TTGCAGAGAAAGAGCGGACAATTGAACGCTTAAAGG...TAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp GAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCTTGCTAGATTCATCTTaGTACCTGGTGATCTCTCTC +
Preference number: 5 (lower is better)
Translates to: ERFDPLSTLDIKKVSVETLLDSS*YLVISL
Trigger: GAGAGAGATCACCAGGTACAAAGATGAATCTAGCAA...GGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAACTTCTGCCTGGGCCTaGCTAGATTCATCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVTSAWA*LDSSLY
Trigger: GTACAAAGATGAATCTAGCAAGGCCCAGGCAGAAGT...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp TCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCTTTCTGACCTGTTTTTCAGCATaGGTCCTGGCTGATTCCTCT +
Preference number: 5 (lower is better)
Translates to: SLTMPIPSLICSLGVSFLTCFSA*VLADSS
Trigger: AGAGGAATCAGCCAGGACCAATGCTGAAAAACAGGT...CAGAAAGCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACACCTGTTTTTCAGCATaGGTCCTGGCTGATTCCTCT +
Preference number: 5 (lower is better)
Translates to: GVGHLVKCWFNDLDSMRHTCFSA*VLADSS
Trigger: AGAGGAATCAGCCAGGACCAATGCTGAAAAACAGGT...GTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GCAGAAAGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTCCAAGAGAGCTATATaGGCGTCTTTTTCACTAATG +
Preference number: 5 (lower is better)
Translates to: AERQSKMADVETVLESHFSKRAI*ASFSLM
Trigger: CATTAGTGAAAAAGACGCCAATATAGCTCTCTTGGA...GAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCTTTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp ATAAAGCGAGATGCTAACACTCCTGCCTTTCAGTGCTGGGAGCTTTCTACATGGTCCAAGAGAGCTATATaGGCGTCTTTTTCACTAATG +
Preference number: 5 (lower is better)
Translates to: IKRDANTPAFQCWELSTWSKRAI*ASFSLM
Trigger: CATTAGTGAAAAAGACGCCAATATAGCTCTCTTGGA...CCATGTAGAAAGCTCCCAGCACTGAAAGGCAGGAGTGTTAGCATCTCGCTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCGGGCTTGTGATTTGTTaGATTGGAATGGGAGGATTT +
Preference number: 5 (lower is better)
Translates to: ERFDPLSTLDIKKVSVETGLVIC*IGMGGF
Trigger: AAATCCTCCCATTCCAATCAAACAAATCACAAGCCC...GGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp GCTACGTCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCGGGCTTGTGATTTGTTaGATTGGAATGGGAGGATTT +
Preference number: 5 (lower is better)
Translates to: ATSLTMPIPSLICSLGVSGLVIC*IGMGGF
Trigger: AAATCCTCCCATTCCAATCAAACAAATCACAAGCCC...GCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGACGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CATCCTCTCAGCCTGTTGAACTCCAAGTCCATTCCTGGTTTCATTCTCATGTCAGGGCTTGTGATTTGTTaGATTGGAATGGGAGGATTT +
Preference number: 5 (lower is better)
Translates to: HPLSLLNSKSIPGFILMSGLVIC*IGMGGF
Trigger: AAATCCTCCCATTCCAATCAAACAAATCACAAGCCC...TGACATGAGAATGAAACCAGGAATGGACTTGGAGTTCAACAGGCTGAGAGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp AACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGGCTGGATGATCGTTTTCTTGGCTCCTGGGTaGACTACCTCAGGCTTCCCC +
Preference number: 5 (lower is better)
Translates to: NFNLLLFWSSSKRGWMIVFLAPG*TTSGFP
Trigger: GGGGAAGCCTGAGGTAGTCAACCCAGGAGCCAAGAA...AACGATCATCCAGCCCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp AGGAAGCATCTCAGTAAGAGGTTTATGAGCAGAGTCCATTTAACCTTCGATAAGCGTAGTTCTCTTTTCTaGGCTCCTGGGTTGACTACC +
Preference number: 5 (lower is better)
Translates to: RKHLSKRFMSRVHLTFDKRSSLF*APGLTT
Trigger: GGTAGTCAACCCAGGAGCCAAGAAAAGAGAACTACG...CTTATCGAAGGTTAAATGGACTCTGCTCATAAACCTCTTACTGAGATGCTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTATATGGTGACATTGGTTaGGGGTGCAGATCTTTAGGT +
Preference number: 5 (lower is better)
Translates to: AVLQRDSTLYLPWTSRRLYGDIG*GCRSLG
Trigger: ACCTAAAGATCTGCACCCCAAACCAATGTCACCATA...TAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TTCCTTGCTGTTCACAGAGACCAGACAGATGATATCGGTCCCGGAAATGCTTCTAGAGCTGAGATGAATTaGGTGATTCCCATCCATATA +
Preference number: 5 (lower is better)
Translates to: FLAVHRDQTDDIGPGNASRAEMN*VIPIHI
Trigger: TATATGGATGGGAATCACCAAATTCATCTCAGCTCT...AGAAGCATTTCCGGGACCGATATCATCTGTCTGGTCTCTGTGAACAGCAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTATTCAATGGACAGAAATaGAGGGGCAAGTCACAATGC +
Preference number: 5 (lower is better)
Translates to: AVLQRDSTLYLPWTSRRLFNGQK*RGKSQC
Trigger: GCATTGTGACTTGCCCCTCAATTTCTGTCCATTGAA...TAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp ATTTATGCTAGAAGAAGGTTCCAGGCAATGCACGAGGCTGAGGTTCAGAGAAGATGGCTGCCCCATAGCTaGAATTCCTTTATTAACAAG +
Preference number: 5 (lower is better)
Translates to: IYARRRFQAMHEAEVQRRWLPHS*NSFINK
Trigger: CTTGTTAATAAAGGAATTCAAGCTATGGGGCAGCCA...TCTTCTCTGAACCTCAGCCTCGTGCATTGCCTGGAACCTTCTTCTAGCATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp ACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACTGGCTGCCCCATAGCTaGAATTCCTTTATTAACAAG +
Preference number: 5 (lower is better)
Translates to: TPQYDNVNSLKQERLVENWLPHS*NSFINK
Trigger: CTTGTTAATAAAGGAATTCAAGCTATGGGGCAGCCA...GTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS CCA 90 bp AAGCCTGGACTACATATACTCCAAGTGTTCCTCCACCTCCTAGAATaGAAGAAAAATTCTGCCTCTGGAGAAAGTGCATGTTTTTCTTGG +
Preference number: 5 (lower is better)
Translates to: KPGLHILQVFLHLLE*KKNSASGESACFSW
Trigger: CCAAGAAAAACATGCACTTTCTCCAGAGGCAGAATTTTTCTTCCATTCTAGGAGGTGGAGGAACACTTGGAGTATATGTAGTCCAGGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000543151.1
CDS-3UTR CAA 90 bp TGGCAGAGGGTTGTCAGGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGCCACTGCTAGCTATATaGGGGCTACTACCCATAGCA +
Preference number: 5 (lower is better)
Translates to: WQRVVRCPMYNFNLLLFWPLLAI*GLLPIA
Trigger: TGCTATGGGTAGTAGCCCCAATATAGCTAGCAGTGG...CCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACCTGACAACCCTCTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCTTTCTGGGGCTCCAGAAGGTCTaGATGCTATTCATTGAAGAA +
Preference number: 5 (lower is better)
Translates to: SLTMPIPSLICSLGVSFLGLQKV*MLFIEE
Trigger: TTCTTCAATGAATAGCATCAAGACCTTCTGGAGCCC...CAGAAAGCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACGGGCTCCAGAAGGTCTaGATGCTATTCATTGAAGAA +
Preference number: 5 (lower is better)
Translates to: GVGHLVKCWFNDLDSMRHGLQKV*MLFIEE
Trigger: TTCTTCAATGAATAGCATCAAGACCTTCTGGAGCCC...GTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TGCTATTTACTGCTTCAACTCCAGCAGGTATGTCTCACAGAATCCACTACATCTTTGGCAGAAAGTCCTTaGCTCTGCAACATTTCCAGA +
Preference number: 5 (lower is better)
Translates to: CYLLLQLQQVCLTESTTSLAESP*LCNISR
Trigger: TCTGGAAATGTTGCAGAGCAAAGGACTTTCTGCCAA...AGATGTAGTGGATTCTGTGAGACATACCTGCTGGAGTTGAAGCAGTAAATAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACTTGGCAGAAAGTCCTTaGCTCTGCAACATTTCCAGA +
Preference number: 5 (lower is better)
Translates to: GVGHLVKCWFNDLDSMRHLAESP*LCNISR
Trigger: TCTGGAAATGTTGCAGAGCAAAGGACTTTCTGCCAA...GTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTATGCAGAGCTTTTGTTTaGGCAGAATCAGGAGCATTC +
Preference number: 5 (lower is better)
Translates to: SSERFDPLSTLDIKKVSVCRAFV*AESGAF
Trigger: GAATGCTCCTGATTCTGCCAAAACAAAAGCTCTGCA...TACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp AGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTCAGTTTGCAGAGCTTTaGTTTTGGCAGAATCAGGAG +
Preference number: 5 (lower is better)
Translates to: SSSERFDPLSTLDIKKVSQFAEL*FWQNQE
Trigger: CTCCTGATTCTGCCAAAACAAAAGCTCTGCAAACTG...ACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp CCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGAACACCGTCTCTAAGCTGCTCTaGAAGATTTTCAATCTTCTT +
Preference number: 5 (lower is better)
Translates to: PQYDNVNSLKQERLVENTVSKLL*KIFNLL
Trigger: AAGAAGATTGAAAATCTTCAAGAGCAGCTTAGAGAC...GGTGTTCTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGGGGCCTCCTCCAAAGTaGTCAAGGCAGTGTCAGTGT +
Preference number: 5 (lower is better)
Translates to: GVQCTTLIYFYFGQVLRGGPPPK*SRQCQC
Trigger: ACACTGACACTGCCTTGACAACTTTGGAGGAGGCCC...CCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp GCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTATTGCTAGATTCATCTTaGTACCTGGTGATCTCTCTC +
Preference number: 5 (lower is better)
Translates to: AVLQRDSTLYLPWTSRRLLLDSS*YLVISL
Trigger: GAGAGAGATCACCAGGTACAAAGATGAATCTAGCAA...TAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp CTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACGGGCTTGTGATTTGTTaGATTGGAATGGGAGGATTT +
Preference number: 5 (lower is better)
Translates to: LSTWFTGTAMNRIEVTDHGLVIC*IGMGGF
Trigger: AAATCCTCCCATTCCAATCAAACAAATCACAAGCCC...GTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTATGCCAATACCTTCATaGATTTGCAGTCTTGGGGTC +
Preference number: 5 (lower is better)
Translates to: SSSERFDPLSTLDIKKVSMPIPS*ICSLGV
Trigger: GACCCCAAGACTGCAAATCAATGAAGGTATTGGCAT...ACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACATGCCAATACCTTCATaGATTTGCAGTCTTGGGGTC +
Preference number: 5 (lower is better)
Translates to: GVGHLVKCWFNDLDSMRHMPIPS*ICSLGV
Trigger: GACCCCAAGACTGCAAATCAATGAAGGTATTGGCAT...GTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp ATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGGCTGGATGAAAGGGCAACTAGACTaGCCGATGGAGGGGTTTGGG +
Preference number: 5 (lower is better)
Translates to: MYNFNLLLFWSSSKRGWMKGQLD*PMEGFG
Trigger: CCCAAACCCCTCCATCGGCAAGTCTAGTTGCCCTTT...CATCCAGCCCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTTGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000440394.7
CDS-3UTR CAA 90 bp GGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACTTAAATTACTGGTATTaGCTGACACAGGGTCCGCTG +
Preference number: 5 (lower is better)
Translates to: GVGHLVKCWFNDLDSMRHLNYWY*LTQGPL
Trigger: CAGCGGACCCTGTGTCAGCAAATACCAGTAATTTAA...GTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS CCA 90 bp CAACAACAACAACAACAAAAATGGGAACCTTGTGAGGTGTCTCTATaGCTACAAGTTGGTTTAAGGTTAATCAGAAGAAGGTCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: QQQQQQKWEPCEVSL*LQVGLRLIRRRSPA
Trigger: AGCTGGGGACCTTCTTCTGATTAACCTTAAACCAACTTGTAGCCATAGAGACACCTCACAAGGTTCCCATTTTTGTTGTTGTTGTTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545318.2
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000589132.1
ENST00000611180.4
CDS-3UTR CAA 90 bp GCTACGTCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCATTGTATATTTTCCATaGAAAGGGTTTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: ATSLTMPIPSLICSLGVSIVYFP*KGFSHC
Trigger: GCAGTGGGAAAACCCTTTCAATGGAAAATATACAAT...GCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGACGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACATCCATTGTATATTTTCCATaGAAAGGGTTTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: FDPLSTLDIKKVSVETTSIVYFP*KGFSHC
Trigger: GCAGTGGGAAAACCCTTTCAATGGAAAATATACAAT...GGATGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp AGGCAGAGTAAGATGGCAGATGTAGAAACGGTGCTGGAATCACACTTCTTCAAGATTGTATATTTTCCATaGAAAGGGTTTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: RQSKMADVETVLESHFFKIVYFP*KGFSHC
Trigger: GCAGTGGGAAAACCCTTTCAATGGAAAATATACAAT...CTTGAAGAAGTGTGATTCCAGCACCGTTTCTACATCTGCCATCTTACTCTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp GAGAAAGCACCTATTGTGATATTAGAACACTCAGCTCTCTGGTCCATTGGAGGCATTGAAGAACTCAATTaGCTCTCCTTTACTTCCACA +
Preference number: 5 (lower is better)
Translates to: EKAPIVILEHSALWSIGGIEELN*LSFTST
Trigger: TGTGGAAGTAAAGGAGAGCAAATTGAGTTCTTCAAT...GCCTCCAATGGACCAGAGAGCTGAGTGTTCTAATATCACAATAGGTGCTTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp AAAGCTGCAGGCGGGGACAACAGGGTCTCATATGTCAACTTTGTATGTTCTCTTATTGAAGAACTCAATTaGCTCTCCTTTACTTCCACA +
Preference number: 5 (lower is better)
Translates to: KAAGGDNRVSYVNFVCSLIEELN*LSFTST
Trigger: TGTGGAAGTAAAGGAGAGCAAATTGAGTTCTTCAAT...AAGAGAACATACAAAGTTGACATATGAGACCCTGTTGTCCCCGCCTGCAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGGCTCCAGAAGGTCTaGATGCTATTCATTGAAGAA +
Preference number: 5 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFGLQKV*MLFIEE
Trigger: TTCTTCAATGAATAGCATCAAGACCTTCTGGAGCCC...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp ATGACTGCTGTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATTGATTTTGGCAGAAAGTCCTTaGCTCTGCAACATTTCCAGA +
Preference number: 5 (lower is better)
Translates to: MTAVVYATSLTMPIPSLILAESP*LCNISR
Trigger: TCTGGAAATGTTGCAGAGCAAAGGACTTTCTGCCAA...AATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAACAGCAGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTCAGTTTGCAGAGCTTTaGTTTTGGCAGAATCAGGAG +
Preference number: 5 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFQFAEL*FWQNQE
Trigger: CTCCTGATTCTGCCAAAACAAAAGCTCTGCAAACTG...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTACATCCAACATGTCCTaGAGGTCATGTATCTCTCCA +
Preference number: 5 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGTSNMS*RSCISP
Trigger: TGGAGAGATACATGACCTCAAGGACATGTTGGATGT...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp GAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCGTCTCTAAGCTGCTCTaGAAGATTTTCAATCTTCTT +
Preference number: 5 (lower is better)
Translates to: ERFDPLSTLDIKKVSVETVSKLL*KIFNLL
Trigger: AAGAAGATTGAAAATCTTCAAGAGCAGCTTAGAGAC...GGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp AGGAAGCATCTCAGTAAGAGGTTTATGAGCAGAGTCCATTTAACCTTCGATAAGCCTTTAAGCGTTCAATaGTCCGCTCTTTCTCTGCAA +
Preference number: 5 (lower is better)
Translates to: RKHLSKRFMSRVHLTFDKPLSVQ*SALSLQ
Trigger: TTGCAGAGAAAGAGCGGACAATTGAACGCTTAAAGG...CTTATCGAAGGTTAAATGGACTCTGCTCATAAACCTCTTACTGAGATGCTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp ATGACTGCTGTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATTGATTTTTTCCACCTGTTCCTaGTGCTTCAGATTTGCTACC +
Preference number: 5 (lower is better)
Translates to: MTAVVYATSLTMPIPSLIFSTCS*CFRFAT
Trigger: GGTAGCAAATCTGAAGCACAAGGAACAGGTGGAAAA...AATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAACAGCAGTCAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CAGTTCTTTACGTTATGGTGGATAAAGCGAGATGCTAACACTCCTGCCTTTCAGTCCAAGAGAGCTATATaGGCGTCTTTTTCACTAATG +
Preference number: 5 (lower is better)
Translates to: QFFTLWWIKRDANTPAFQSKRAI*ASFSLM
Trigger: CATTAGTGAAAAAGACGCCAATATAGCTCTCTTGGA...CTGAAAGGCAGGAGTGTTAGCATCTCGCTTTATCCACCATAACGTAAAGAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTGTAGAGACCACATCCAAGAGAGCTATATaGGCGTCTTTTTCACTAATG +
Preference number: 5 (lower is better)
Translates to: RFDPLSTLDIKKVSVETTSKRAI*ASFSLM
Trigger: CATTAGTGAAAAAGACGCCAATATAGCTCTCTTGGA...TGTGGTCTCTACACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
CDS-3UTR CAA 90 bp ATGACTGCTGTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATTGATTTCAAGGATGGATGACTaGCACACAGTAGGCATTTCA +
Preference number: 5 (lower is better)
Translates to: MTAVVYATSLTMPIPSLISRMDD*HTVGIS
Trigger: TGAAATGCCTACTGTGTGCAAGTCATCCATCCTTGA...AATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAACAGCAGTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp CTAACACCTCAGTATGATAACGTCAACAGTCTCAAACAGGAGAGACTGGTGGAGCCTTGCAAATCTCAATaGAGATACCTCATCAATGAT +
Preference number: 5 (lower is better)
Translates to: LTPQYDNVNSLKQERLVEPCKSQ*RYLIND
Trigger: ATCATTGATGAGGTATCTCAATTGAGATTTGCAAGG...CTCCACCAGTCTCTCCTGTTTGAGACTGTTGACGTTATCATACTGAGGTGTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS CCA 90 bp GAATGGAAGAAAAATTCTGCCTCTGGAGAAAGTGCATGTTTTTCTTaGCCAAGAGATGTGATGAGGGAACTCATTACGAATTCTGTCTCA +
Preference number: 5 (lower is better)
Translates to: EWKKNSASGESACFS*PRDVMRELITNSVS
Trigger: TGAGACAGAATTCGTAATGAGTTCCCTCATCACATCTCTTGGCCAAGAAAAACATGCACTTTCTCCAGAGGCAGAATTTTTCTTCCATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000543151.1
CDS-3UTR CAA 90 bp CTTTCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACATTGTATATTTTCCATaGAAAGGGTTTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: LSTWFTGTAMNRIEVTDHIVYFP*KGFSHC
Trigger: GCAGTGGGAAAACCCTTTCAATGGAAAATATACAAT...GTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GCAGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTCTCTAAGCTGCTCTaGAAGATTTTCAATCTTCTT +
Preference number: 5 (lower is better)
Translates to: AVLQRDSTLYLPWTSRRLVSKLL*KIFNLL
Trigger: AAGAAGATTGAAAATCTTCAAGAGCAGCTTAGAGAC...TAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp TGGCAGAGGGTTGTCAGGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGCCTTTAAGCGTTCAATaGTCCGCTCTTTCTCTGCAA +
Preference number: 5 (lower is better)
Translates to: WQRVVRCPMYNFNLLLFWPLSVQ*SALSLQ
Trigger: TTGCAGAGAAAGAGCGGACAATTGAACGCTTAAAGG...CCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACCTGACAACCCTCTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000611180.4
CDS-3UTR CAA 90 bp ATGACTGCTGTTGTCTACGCTACGTCCTTAACAATGCCAATACCTTCATTGATTTTGCTAGATTCATCTTaGTACCTGGTGATCTCTCTC +
Preference number: 5 (lower is better)
Translates to: MTAVVYATSLTMPIPSLILLDSS*YLVISL
Trigger: GAGAGAGATCACCAGGTACAAAGATGAATCTAGCAA...AATCAATGAAGGTATTGGCATTGTTAAGGACGTAGCGTAGACAACAGCAGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTTTGCTAGATTCATCTTaGTACCTGGTGATCTCTCTC +
Preference number: 5 (lower is better)
Translates to: CWNHTSSSEQVGMKFVVFLLDSS*YLVISL
Trigger: GAGAGAGATCACCAGGTACAAAGATGAATCTAGCAA...AAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TCTACATGGTTTACGGGCACTGCAATGAACAGAATTGAGGTAACTGACCACAAATCCAAGAGAGCTATATaGGCGTCTTTTTCACTAATG +
Preference number: 5 (lower is better)
Translates to: STWFTGTAMNRIEVTDHKSKRAI*ASFSLM
Trigger: CATTAGTGAAAAAGACGCCAATATAGCTCTCTTGGA...TTTGTGGTCAGTTACCTCAATTCTGTTCATTGCAGTGCCCGTAAACCATGTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp TGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAGTGTTTGGTGGGCTTGTGATTTGTTaGATTGGAATGGGAGGATTT +
Preference number: 5 (lower is better)
Translates to: WNHTSSSEQVGMKFVVFGGLVIC*IGMGGF
Trigger: AAATCCTCCCATTCCAATCAAACAAATCACAAGCCC...ACCAAACACTACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS-3UTR CAA 90 bp AACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGGCTGGATGATCGTTTCCTGCAGTTCTGCATaGTCCCGTTCACCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: NFNLLLFWSSSKRGWMIVSCSSA*SRSPFS
Trigger: AGAGAAAGGTGAACGGGACAATGCAGAACTGCAGGA...AACGATCATCCAGCCCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp AGGGTTGTCAGGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTAGTTACAAAACCCCGTaGGGATCACACCCACTCTTC +
Preference number: 5 (lower is better)
Translates to: RVVRCPMYNFNLLLFWSSSYKTP*GSHPLF
Trigger: GAAGAGTGGGTGTGATCCCAACGGGGTTTTGTAACT...ACTTGACCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACCTGACAACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000440394.7
CDS-3UTR CAA 90 bp AGTTCTTCAGAGAGATTCGACCCTTTATCTACCCTGGACATCAAGAAGGTTAGTAGAGCTGAGATGAATTaGGTGATTCCCATCCATATA +
Preference number: 5 (lower is better)
Translates to: SSSERFDPLSTLDIKKVSRAEMN*VIPIHI
Trigger: TATATGGATGGGAATCACCAAATTCATCTCAGCTCT...ACTAACCTTCTTGATGTCCAGGGTAGATAAAGGGTCGAATCTCTCTGAAGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000589028.5
CDS CCA 90 bp CCAAGAGATGTGATGAGGGAACTCATTACGAATTCTGTCTCATCCTaGCTTATGCTCTTCTCATTTATTTCACAGAGGTTATCCGATATT +
Preference number: 5 (lower is better)
Translates to: PRDVMRELITNSVSS*LMLFSFISQRLSDI
Trigger: AATATCGGATAACCTCTGTGAAATAAATGAGAAGAGCATAAGCCAGGATGAGACAGAATTCGTAATGAGTTCCCTCATCACATCTCTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543151.1
CDS-3UTR CAA 90 bp GGAGTGGGACATTTGGTTAAGTGTTGGTTCAATGATCTAGACTCAATGAGACACATTGTATATTTTCCATaGAAAGGGTTTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: GVGHLVKCWFNDLDSMRHIVYFP*KGFSHC
Trigger: GCAGTGGGAAAACCCTTTCAATGGAAAATATACAAT...GTGTCTCATTGAGTCTAGATCATTGAACCAACACTTAACCAAATGTCCCACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AAACGGTGCTGGAATCACACTTCTTCAAGTGAGCAAGTTGGGATGAAGTTTGTAATTGTATATTTTCCATaGAAAGGGTTTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: KRCWNHTSSSEQVGMKFVIVYFP*KGFSHC
Trigger: GCAGTGGGAAAACCCTTTCAATGGAAAATATACAAT...TACAAACTTCATCCCAACTTGCTCACTTGAAGAAGTGTGATTCCAGCACCGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS-3UTR CAA 90 bp TCCTTAACAATGCCAATACCTTCATTGATTTGCAGTCTTGGGGTCAGCTTTCTGGTCTCTAAGCTGCTCTaGAAGATTTTCAATCTTCTT +
Preference number: 5 (lower is better)
Translates to: SLTMPIPSLICSLGVSFLVSKLL*KIFNLL
Trigger: AAGAAGATTGAAAATCTTCAAGAGCAGCTTAGAGAC...CAGAAAGCTGACCCCAAGACTGCAAATCAATGAAGGTATTGGCATTGTTAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp GGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGACCTGTTTTTCAGCATaGGTCCTGGCTGATTCCTCT +
Preference number: 5 (lower is better)
Translates to: GVQCTTLIYFYFGQVLRGTCFSA*VLADSS
Trigger: AGAGGAATCAGCCAGGACCAATGCTGAAAAACAGGT...CCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000440394.7
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp TGGCAGAGGGTTGTCAGGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGGGGCTTGTGATTTGTTaGATTGGAATGGGAGGATTT +
Preference number: 5 (lower is better)
Translates to: WQRVVRCPMYNFNLLLFWGLVIC*IGMGGF
Trigger: AAATCCTCCCATTCCAATCAAACAAATCACAAGCCC...CCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACCTGACAACCCTCTGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS TCA 90 bp GTGAGCAGAAAATCAACAACAACAACAACAAAAATGGGAACCTTGTaGGGTGTCTCTATGGCTACAAGTTGGTTTAAGGTTAATCAGAAG +
Preference number: 5 (lower is better)
Translates to: VSRKSTTTTTKMGTL*GVSMATSWFKVNQK
Trigger: CTTCTGATTAACCTTAAACCAACTTGTAGCCATAGAGACACCTCACAAGGTTCCCATTTTTGTTGTTGTTGTTGTTGATTTTCTGCTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545318.2
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000589132.1
ENST00000611180.4
CDS-3UTR CAA 90 bp AGGAAGCATCTCAGTAAGAGGTTTATGAGCAGAGTCCATTTAACCTTCGATAAGATTGAAGAACTCAATTaGCTCTCCTTTACTTCCACA +
Preference number: 5 (lower is better)
Translates to: RKHLSKRFMSRVHLTFDKIEELN*LSFTST
Trigger: TGTGGAAGTAAAGGAGAGCAAATTGAGTTCTTCAAT...CTTATCGAAGGTTAAATGGACTCTGCTCATAAACCTCTTACTGAGATGCTTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000589028.5
CDS-3UTR CAA 90 bp AACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGGCTGGATGATCGTTTGCAGAGCTTTTGTTTaGGCAGAATCAGGAGCATTC +
Preference number: 5 (lower is better)
Translates to: NFNLLLFWSSSKRGWMIVCRAFV*AESGAF
Trigger: GAATGCTCCTGATTCTGCCAAAACAAAAGCTCTGCA...AACGATCATCCAGCCCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
CDS-3UTR CAA 90 bp GGTGTCCAATGTACAACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGTTGCTAGATTCATCTTaGTACCTGGTGATCTCTCTC +
Preference number: 5 (lower is better)
Translates to: GVQCTTLIYFYFGQVLRGLLDSS*YLVISL
Trigger: GAGAGAGATCACCAGGTACAAAGATGAATCTAGCAA...CCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTTGTACATTGGACACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS-3UTR CAA 90 bp AACTTTAATTTACTTCTATTTTGGTCAAGTTCTAAGAGGGGCTGGATGATCGTTTCCAAGAGAGCTATATaGGCGTCTTTTTCACTAATG +
Preference number: 5 (lower is better)
Translates to: NFNLLLFWSSSKRGWMIVSKRAI*ASFSLM
Trigger: CATTAGTGAAAAAGACGCCAATATAGCTCTCTTGGA...AACGATCATCCAGCCCCTCTTAGAACTTGACCAAAATAGAAGTAAATTAAAGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS CCA 72 bp TTCGACGGTGACCCAAGCGAGGGGAACGTGGAAGCCTaGGTGAACGCCCAGGGCTCTGGCTGCTCGGCTCCA +
Preference number: 6 (lower is better)
Translates to: FDGDPSEGNVEA*VNAQGSGCSAP
Trigger: TGGAGCCGAGCAGCCAGAGCCCTGGGCGTTCACCCAGGCTTCCACGTTCCCCTCGCTTGGGTCACCGTCGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545318.2
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000589132.1
ENST00000611180.4
CDS TCA 72 bp CTTCCCGAACTCCCTCCCGTACTGTTGGTTCGACGGTaGCCCAAGCGAGGGGAACGTGGAAGCCTGGGTGAA +
Preference number: 6 (lower is better)
Translates to: LPELPPVLLVRR*PKRGERGSLGE
Trigger: TTCACCCAGGCTTCCACGTTCCCCTCGCTTGGGTCACCGTCGAACCAACAGTACGGGAGGGAGTTCGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545318.2
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000589132.1
ENST00000611180.4
CDS GCA 72 bp TTGAGTGAGAGGCTCACCTGCCCCCGGGTCATCTTCTaGAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCC +
Preference number: 6 (lower is better)
Translates to: LSERLTCPRVIF*SSFSQAAWSSS
Trigger: GGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCGGGGGCAGGTGAGCCTCTCACTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539802.2
CDS GCA 72 bp TTGAAGAAGTATCTTACACCATATCGTCCTCAGGGCTaGCGCTACTGCTGCTGCTGCCGCCCAGGCACCGCC +
Preference number: 6 (lower is better)
Translates to: LKKYLTPYRPQG*RYCCCCRPGTA
Trigger: GGCGGTGCCTGGGCGGCAGCAGCAGCAGTAGCGGCAGCCCTGAGGACGATATGGTGTAAGATACTTCTTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360905.9
ENST00000543086.7
ENST00000545948.5
CDS GCA 72 bp TTGGGATGCAACGGATTCTGCCCCCGGGTCATCTTCTaGAGCTCATTCTCCCAAGCCGCCTGGTCATCGTCC +
Preference number: 6 (lower is better)
Translates to: LGCNGFCPRVIF*SSFSQAAWSSS
Trigger: GGACGATGACCAGGCGGCTTGGGAGAATGAGCTGCAGAAGATGACCCGGGGGCAGAATCCGTTGCATCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355446.9
CDS CCA 72 bp CTCCAACACTGCTTCCCGAACTCCCTCCCGTACTGTTaGTTCGACGGTGACCCAAGCGAGGGGAACGTGGAA +
Preference number: 6 (lower is better)
Translates to: LQHCFPNSLPYC*FDGDPSEGNVE
Trigger: TTCCACGTTCCCCTCGCTTGGGTCACCGTCGAACCAACAGTACGGGAGGGAGTTCGGGAAGCAGTGTTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545318.2
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000589132.1
ENST00000611180.4
CDS CCA 72 bp AGCAGCTGTGAGCACTGCGAAGCACCGCCAAAACGCTaGCAGATCTCAGTGTGTTCCCAGGGCTCACACAGC +
Preference number: 6 (lower is better)
Translates to: SSCEHCEAPPKR*QISVCSQGSHS
Trigger: GCTGTGTGAGCCCTGGGAACACACTGAGATCTGCCAGCGTTTTGGCGGTGCTTCGCAGTGCTCACAGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543151.1
CDS TCA 72 bp TGGCAAGAGGCCTCTGTTCCTCTCCACCGGGCTGCTTaGGTGTCATTACAACACGGAGGCTGGCTCTCACCA +
Preference number: 6 (lower is better)
Translates to: WQEASVPLHRAA*VSLQHGGWLSP
Trigger: TGGTGAGAGCCAGCCTCCGTGTTGTAATGACACTCAAGCAGCCCGGTGGAGAGGAACAGAGGCCTCTTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543263.2
CDS CAA 90 bp CGCCTGGAATCCCAGCTACTCGGGTGGCTGAGGCATGAGAATCACTaGAATCCGGTAGAAGGAGGCTGCAGTGAGCTGAGATCACACCAC +
Preference number: 6 (lower is better)
Translates to: RLESQLLGWLRHENH*NPVEGGCSELRSHH
Trigger: GTGGTGTGATCTCAGCTCACTGCAGCCTCCTTCTACCGGATTCAAGTGATTCTCATGCCTCAGCCACCCGAGTAGCTGGGATTCCAGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536573.6
CDS TCA 72 bp TACGGAGACTGTCCTGTAGCTGCTGAGAGCTGTCGTTaGGATTGTCCTCCCGTCGTCGCGCCTCCTCTAACA +
Preference number: 6 (lower is better)
Translates to: YGDCPVAAESCR*DCPPVVAPPLT
Trigger: TGTTAGAGGAGGCGCGACGACGGGAGGACAATCTCAACGACAGCTCTCAGCAGCTACAGGACAGTCTCCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000543086.7
ENST00000544277.1
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS TCA 72 bp GTAACTCCTCCACCTGTAGCTGCTGAGAGCTGTCGTTaGGATTGTCCTCCCGTCGTCGCGCCTCCTCTAACA +
Preference number: 6 (lower is better)
Translates to: VTPPPVAAESCR*DCPPVVAPPLT
Trigger: TGTTAGAGGAGGCGCGACGACGGGAGGACAATCTCAACGACAGCTCTCAGCAGCTACAGGTGGAGGAGTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347735.10
ENST00000538971.6
ENST00000542302.6
CDS TCA 72 bp AGCAAGACCCTGTCTGTAGCTGCTGAGAGCTGTCGTTaGGATTGTCCTCCCGTCGTCGCGCCTCCTCTAACA +
Preference number: 6 (lower is better)
Translates to: SKTLSVAAESCR*DCPPVVAPPLT
Trigger: TGTTAGAGGAGGCGCGACGACGGGAGGACAATCTCAACGACAGCTCTCAGCAGCTACAGACAGGGTCTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536573.6
CDS TCA 72 bp ACGCCTGGAATCCCAGCTACTCGGGTGGCTGAGGCATaGGAATCACTTGAATCCGGTAGAAGGAGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: TPGIPATRVAEA*ESLESGRRRLQ
Trigger: CTGCAGCCTCCTTCTACCGGATTCAAGTGATTCTCATGCCTCAGCCACCCGAGTAGCTGGGATTCCAGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536573.6
CDS GCA 72 bp CCATTGAAAGGGTTTTCCCACTGCCACCTCCAACACTaGTTCCCGAACTCCCTCCCGTACTGTTGGTTCGAC +
Preference number: 6 (lower is better)
Translates to: PLKGFSHCHLQH*FPNSLPYCWFD
Trigger: GTCGAACCAACAGTACGGGAGGGAGTTCGGGAAGCAGTGTTGGAGGTGGCAGTGGGAAAACCCTTTCAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545318.2
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000589132.1
ENST00000611180.4
CDS GCA 72 bp GATCTCAGTGTGTTCCCAGGGCTCACACAGCAGGTCTaGACCTGTTGCATGTCACCGGCCTGGCAATTTTCA +
Preference number: 6 (lower is better)
Translates to: DLSVFPGLTQQV*TCCMSPAWQFS
Trigger: TGAAAATTGCCAGGCCGGTGACATGCAACAGGTGCAGACCTGCTGTGTGAGCCCTGGGAACACACTGAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543151.1
CDS CCA 72 bp CAATCCTGTCATCCTTCTTACGGAGACTGTCATGGCTaGCAAGGTGGTGCAGCTAGTGGCAAGAGGCCTCTG +
Preference number: 6 (lower is better)
Translates to: QSCHPSYGDCHG*QGGAASGKRPL
Trigger: CAGAGGCCTCTTGCCACTAGCTGCACCACCTTGCCAGCCATGACAGTCTCCGTAAGAAGGATGACAGGATTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543263.2
CDS CAA 72 bp TCCCAGCTACTCGGGTGGCTGAGGCATGAGAATCACTaGAATCCGGTAGAAGGAGGCTGCAGTGAGCTGAGA +
Preference number: 6 (lower is better)
Translates to: SQLLGWLRHENH*NPVEGGCSELR
Trigger: TCTCAGCTCACTGCAGCCTCCTTCTACCGGATTCAAGTGATTCTCATGCCTCAGCCACCCGAGTAGCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536573.6
CDS CAA 72 bp TGTGTTCCCAGGGCTCACACAGCAGGTCTGCACCTGTaGCATGTCACCGGCCTGGCAATTTTCATGAACAGG +
Preference number: 6 (lower is better)
Translates to: CVPRAHTAGLHL*HVTGLAIFMNR
Trigger: CCTGTTCATGAAAATTGCCAGGCCGGTGACATGCAACAGGTGCAGACCTGCTGTGTGAGCCCTGGGAACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543151.1
CDS CAA 90 bp AGATCTCAGTGTGTTCCCAGGGCTCACACAGCAGGTCTGCACCTGTaGCATGTCACCGGCCTGGCAATTTTCATGAACAGGACACCTCTG +
Preference number: 6 (lower is better)
Translates to: RSQCVPRAHTAGLHL*HVTGLAIFMNRTPL
Trigger: CAGAGGTGTCCTGTTCATGAAAATTGCCAGGCCGGTGACATGCAACAGGTGCAGACCTGCTGTGTGAGCCCTGGGAACACACTGAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543151.1
CDS GCA 72 bp ATCTCTCGCCTGACGAAGGGAGTGAGGTACAGTGGATaGCATACTCACAGGAGGGAGGTGATGCTCTCCAAA +
Preference number: 6 (lower is better)
Translates to: ISRLTKGVRYSG*HTHRREVMLSK
Trigger: TTTGGAGAGCATCACCTCCCTCCTGTGAGTATGGCATCCACTGTACCTCACTCCCTTCGTCAGGCGAGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS GCA 72 bp CTGTCAGCTCTGCTACACAAGGTTCGCCAGTCCTGCTaGTACTATCCTGCTGAAACAGCTGATTCAGGTCCC +
Preference number: 6 (lower is better)
Translates to: LSALLHKVRQSC*YYPAETADSGP
Trigger: GGGACCTGAATCAGCTGTTTCAGCAGGATAGTAGCAGCAGGACTGGCGAACCTTGTGTAGCAGAGCTGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000538971.6
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
ENST00000592048.5
CDS CCA 72 bp TGTTATCTCTCGCCTGACGAAGGGAGTGAGGTACAGTaGATGCCATACTCACAGGAGGGAGGTGATGCTCTC +
Preference number: 6 (lower is better)
Translates to: CYLSPDEGSEVQ*MPYSQEGGDAL
Trigger: GAGAGCATCACCTCCCTCCTGTGAGTATGGCATCCACTGTACCTCACTCCCTTCGTCAGGCGAGAGATAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS CCA 72 bp CTCTCTCTCCAAGTGCTGTATTCGGTCACTCATCTCTaGACTGGCTCTGGCTTCCAATGCTGCCTCATGTGC +
Preference number: 6 (lower is better)
Translates to: LSLQVLYSVTHL*TGSGFQCCLMC
Trigger: GCACATGAGGCAGCATTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACCGAATACAGCACTTGGAGAGAGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000536573.6
ENST00000538971.6
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS CCA 72 bp CGATCCTTCTCCCGCTTCAGGGCAGCCACTTCCTCTTaGGTCTTCTTCTTAGAGGACGAAAGCTCCAAGAGA +
Preference number: 6 (lower is better)
Translates to: RSFSRFRAATSS*VFFLEDESSKR
Trigger: TCTCTTGGAGCTTTCGTCCTCTAAGAAGAAGACCCAAGAGGAAGTGGCTGCCCTGAAGCGGGAGAAGGATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000538971.6
ENST00000542302.6
ENST00000543086.7
ENST00000543263.2
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS CAA 72 bp AGGGCCTCCTCCAAAGTTGTCAAGGCAGTGTCAGTGTaGGTGGTGTCAGCCTGCAAGGATTTGACCCGTTCT +
Preference number: 6 (lower is better)
Translates to: RASSKVVKAVSV*VVSACKDLTRS
Trigger: AGAACGGGTCAAATCCTTGCAGGCTGACACCACCAACACTGACACTGCCTTGACAACTTTGGAGGAGGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000536573.6
ENST00000538971.6
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS CAA 72 bp ACGATCCTTCTCCCGCTTCAGGGCAGCCACTTCCTCTaGGGTCTTCTTCTTAGAGGACGAAAGCTCCAAGAG +
Preference number: 6 (lower is better)
Translates to: TILLPLQGSHFL*GLLLRGRKLQE
Trigger: CTCTTGGAGCTTTCGTCCTCTAAGAAGAAGACCCAAGAGGAAGTGGCTGCCCTGAAGCGGGAGAAGGATCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000538971.6
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS CAA 72 bp CCTGGTATTACTTTCCACAGTAACACTGATTCCTCCTaGGACCCCCTCAGAGGACTGCTCCTGCCACGTTCC +
Preference number: 6 (lower is better)
Translates to: PGITFHSNTDSS*DPLRGLLLPRS
Trigger: GGAACGTGGCAGGAGCAGTCCTCTGAGGGGGTCCAAGGAGGAATCAGTGTTACTGTGGAAAGTAATACCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543151.1
CDS TCA 72 bp TCCTGTTTCACCTGGCCAATGGCAAAGACCTCAGCCTaGAGACCAGCCGCTTTCTTTTTCAGCTCCTCCCAT +
Preference number: 6 (lower is better)
Translates to: SCFTWPMAKTSA*RPAAFFFSSSH
Trigger: ATGGGAGGAGCTGAAAAAGAAAGCGGCTGGTCTTCAGGCTGAGGTCTTTGCCATTGGCCAGGTGAAACAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536573.6
CDS GCA 72 bp CCTCTGTCAGCTCTGCTACACAAGGTTCGCCAGTCCTaGTGCTACTATCCTGCTGAAACAGCTGATTCAGGT +
Preference number: 6 (lower is better)
Translates to: PLSALLHKVRQS*CYYPAETADSG
Trigger: ACCTGAATCAGCTGTTTCAGCAGGATAGTAGCAGCAGGACTGGCGAACCTTGTGTAGCAGAGCTGACAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000538971.6
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
ENST00000592048.5
CDS GCA 72 bp ACAGGCTCTTTTCAAAGTTTGAGTGAGAGGCTCACCTaGCCCCGGGTCATCTTCTGCAGCTCATTCTCCCAA +
Preference number: 6 (lower is better)
Translates to: TGSFQSLSERLT*PRVIFCSSFSQ
Trigger: TTGGGAGAATGAGCTGCAGAAGATGACCCGGGGGCAGGTGAGCCTCTCACTCAAACTTTGAAAAGAGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539802.2
CDS CCA 72 bp GCTTTGTCTGCAGGGCGAGTAGTTCTGTGTCCTTTCTaGACAGCTCCTGTTTCACCTGGCCAATGGCAAAGA +
Preference number: 6 (lower is better)
Translates to: ALSAGRVVLCPF*TAPVSPGQWQR
Trigger: TCTTTGCCATTGGCCAGGTGAAACAGGAGCTGTCCAGAAAGGACACAGAACTACTCGCCCTGCAGACAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536573.6
CDS CCA 72 bp CTGGTATTACTTTCCACAGTAACACTGATTCCTCCTTaGACCCCCTCAGAGGACTGCTCCTGCCACGTTCCT +
Preference number: 6 (lower is better)
Translates to: LVLLSTVTLIPP*TPSEDCSCHVP
Trigger: AGGAACGTGGCAGGAGCAGTCCTCTGAGGGGGTCCAAGGAGGAATCAGTGTTACTGTGGAAAGTAATACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543151.1
CDS CAA 72 bp GCTATGGTGTCACTAGCAACCCCACTGCTAGCTATATaGGGGCTACTACCCATAGCAGTCATCCGAACACCG +
Preference number: 6 (lower is better)
Translates to: AMVSLATPLLAI*GLLPIAVIRTP
Trigger: CGGTGTTCGGATGACTGCTATGGGTAGTAGCCCCAATATAGCTAGCAGTGGGGTTGCTAGTGACACCATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000589132.1
ENST00000611180.4
CDS CAA 90 bp TTCTCTGCAAGGGCCTCCTCCAAAGTTGTCAAGGCAGTGTCAGTGTaGGTGGTGTCAGCCTGCAAGGATTTGACCCGTTCTTTCAAGCTG +
Preference number: 6 (lower is better)
Translates to: FSARASSKVVKAVSV*VVSACKDLTRSFKL
Trigger: CAGCTTGAAAGAACGGGTCAAATCCTTGCAGGCTGACACCACCAACACTGACACTGCCTTGACAACTTTGGAGGAGGCCCTTGCAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000536573.6
ENST00000538971.6
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS CAA 90 bp TGCTCGGCTCCACCTTCCCAACAGAGCGGGCACTTCCATACATGGTaGCAAGGTCAGGAAAGGTGTGAGCAGAAAATCAACAACAACAAC +
Preference number: 6 (lower is better)
Translates to: CSAPPSQQSGHFHTW*QGQERCEQKINNNN
Trigger: GTTGTTGTTGTTGATTTTCTGCTCACACCTTTCCTGACCTTGCAACCATGTATGGAAGTGCCCGCTCTGTTGGGAAGGTGGAGCCGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545318.2
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000589132.1
ENST00000611180.4
CDS GCA 72 bp TGCCATACTCACAGGAGGGAGGTGATGCTCTCCAAATaGTATGGTGTCACTAGCAACCCCACTGCTAGCTAT +
Preference number: 6 (lower is better)
Translates to: CHTHRREVMLSK*YGVTSNPTASY
Trigger: ATAGCTAGCAGTGGGGTTGCTAGTGACACCATAGCATTTGGAGAGCATCACCTCCCTCCTGTGAGTATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000589132.1
ENST00000611180.4
CDS GCA 72 bp GTTGTCAAGGCAGTGTCAGTGTTGGTGGTGTCAGCCTaGAAGGATTTGACCCGTTCTTTCAAGCTGCTCATC +
Preference number: 6 (lower is better)
Translates to: VVKAVSVLVVSA*KDLTRSFKLLI
Trigger: GATGAGCAGCTTGAAAGAACGGGTCAAATCCTTGCAGGCTGACACCACCAACACTGACACTGCCTTGACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000536573.6
ENST00000538971.6
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS CCA 72 bp TCTCCAAGTGCTGTATTCGGTCACTCATCTCTGGACTaGCTCTGGCTTCCAATGCTGCCTCATGTGCCTTTT +
Preference number: 6 (lower is better)
Translates to: SPSAVFGHSSLD*LWLPMLPHVPF
Trigger: AAAAGGCACATGAGGCAGCATTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACCGAATACAGCACTTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000536573.6
ENST00000538971.6
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS CAA 90 bp GCCTCTGCCAGTCGTCTTGTTCTCTCATGGTCTTCCTCGGTAGCCTaGGCAGAAAGTCCTTTGCTCTGCAACATTTCCAGAAGCTTCTTA +
Preference number: 6 (lower is better)
Translates to: ASASRLVLSWSSSVA*AESPLLCNISRSFL
Trigger: TAAGAAGCTTCTGGAAATGTTGCAGAGCAAAGGACTTTCTGCCAAGGCTACCGAGGAAGACCATGAGAGAACAAGACGACTGGCAGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000538971.6
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
ENST00000592048.5
CDS CAA 90 bp GAAGCAAGGCCTGGTATTACTTTCCACAGTAACACTGATTCCTCCTaGGACCCCCTCAGAGGACTGCTCCTGCCACGTTCCTTTATTTCT +
Preference number: 6 (lower is better)
Translates to: EARPGITFHSNTDSS*DPLRGLLLPRSFIS
Trigger: AGAAATAAAGGAACGTGGCAGGAGCAGTCCTCTGAGGGGGTCCAAGGAGGAATCAGTGTTACTGTGGAAAGTAATACCAGGCCTTGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543151.1
CDS TCA 72 bp TCCTCAGTACTCAAAGCACCATTCGATTTCAGCATCTaGATTTCCTCTTCCAGGTCTCGAAGCCCACGCTCC +
Preference number: 6 (lower is better)
Translates to: SSVLKAPFDFSI*ISSSRSRSPRS
Trigger: GGAGCGTGGGCTTCGAGACCTGGAAGAGGAAATTCAGATGCTGAAATCGAATGGTGCTTTGAGTACTGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000536573.6
ENST00000538971.6
ENST00000539007.5
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
ENST00000592048.5
CDS TCA 72 bp CAGTGTCAGTGTTGGTGGTGTCAGCCTGCAAGGATTTaGCCCGTTCTTTCAAGCTGCTCATCTGCTTTTCCT +
Preference number: 6 (lower is better)
Translates to: QCQCWWCQPARI*PVLSSCSSAFP
Trigger: AGGAAAAGCAGATGAGCAGCTTGAAAGAACGGGTCAAATCCTTGCAGGCTGACACCACCAACACTGACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000536573.6
ENST00000538971.6
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS CCA 72 bp GCTTTGTCTGCAGGGCGAGTAGTTCTGTGTCCTTTCTaGACAGCTCCTGTTTCACCTGGCCAATCTAGAAAA +
Preference number: 6 (lower is better)
Translates to: ALSAGRVVLCPF*TAPVSPGQSRK
Trigger: TTTTCTAGATTGGCCAGGTGAAACAGGAGCTGTCCAGAAAGGACACAGAACTACTCGCCCTGCAGACAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541503.1
CDS CAA 72 bp CTCCTCATCCTGGTCTGGGGAGGGCTTGTGATTTGTTaGATTGGAATGGGAGGATTTGAAGTGGTCATCCTC +
Preference number: 6 (lower is better)
Translates to: LLILVWGGLVIC*IGMGGFEVVIL
Trigger: GAGGATGACCACTTCAAATCCTCCCATTCCAATCAAACAAATCACAAGCCCTCCCCAGACCAGGATGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000538971.6
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS CAA 90 bp GTTGTCAAGGCAGTGTCAGTGTTGGTGGTGTCAGCCTGCAAGGATTaGACCCGTTCTTTCAAGCTGCTCATCTGCTTTTCCTTGTCTCTA +
Preference number: 6 (lower is better)
Translates to: VVKAVSVLVVSACKD*TRSFKLLICFSLSL
Trigger: TAGAGACAAGGAAAAGCAGATGAGCAGCTTGAAAGAACGGGTCAAATCCTTGCAGGCTGACACCACCAACACTGACACTGCCTTGACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000536573.6
ENST00000538971.6
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000611180.4
CDS CAA 90 bp TATACCCTCCTCCTCATCCTGGTCTGGGGAGGGCTTGTGATTTGTTaGATTGGAATGGGAGGATTTGAAGTGGTCATCCTCGTAGTTGTC +
Preference number: 6 (lower is better)
Translates to: YTLLLILVWGGLVIC*IGMGGFEVVILVVV
Trigger: GACAACTACGAGGATGACCACTTCAAATCCTCCCATTCCAATCAAACAAATCACAAGCCCTCCCCAGACCAGGATGAGGAGGAGGGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347735.10
ENST00000440394.7
ENST00000538971.6
ENST00000542302.6
ENST00000545948.5
ENST00000588412.5
ENST00000611180.4
CDS GCA 72 bp AAGATTGTATATTTTCCATTGAAAGGGTTTTCCCACTaGCACCTCCAACACTGCTTCCCGAACTCCCTCCCG +
Preference number: 6 (lower is better)
Translates to: KIVYFPLKGFSH*HLQHCFPNSLP
Trigger: CGGGAGGGAGTTCGGGAAGCAGTGTTGGAGGTGGCAGTGGGAAAACCCTTTCAATGGAAAATATACAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545318.2
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000589132.1
ENST00000611180.4
CDS GCA 72 bp TCTGAGAACTGGTTTGTGAGTGTTTCTAGCTTTGTCTaGAGGGCGAGTAGTTCTGTGTCCTTTCTGGACAGC +
Preference number: 6 (lower is better)
Translates to: SENWFVSVSSFV*RASSSVSFLDS
Trigger: GCTGTCCAGAAAGGACACAGAACTACTCGCCCTGCAGACAAAGCTAGAAACACTCACAAACCAGTTCTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000536573.6
ENST00000538971.6
ENST00000539007.5
ENST00000541503.1
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
ENST00000592048.5
CDS CCA 72 bp TTTCCTCCAATGTCTTTCGAAGAAGAAACAGCTCTTTaGCCTGCCGCTCATGCTCAGCATGAAGCCTCTGAA +
Preference number: 6 (lower is better)
Translates to: FPPMSFEEETAL*PAAHAQHEASE
Trigger: TTCAGAGGCTTCATGCTGAGCATGAGCGGCAGGCCAAAGAGCTGTTTCTTCTTCGAAAGACATTGGAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000538971.6
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
ENST00000592048.5
CDS CCA 72 bp GCTTTGTCTGCAGGGCGAGTAGTTCTGTGTCCTTTCTaGACAGCTCCTGTTTCACCTGGCCAATCTTATTTT +
Preference number: 6 (lower is better)
Translates to: ALSAGRVVLCPF*TAPVSPGQSYF
Trigger: AAAATAAGATTGGCCAGGTGAAACAGGAGCTGTCCAGAAAGGACACAGAACTACTCGCCCTGCAGACAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347735.10
ENST00000397203.6
ENST00000440394.7
ENST00000538971.6
ENST00000543086.7
ENST00000592048.5
CDS CAA 72 bp AGTCGTCTTGTTCTCTCATGGTCTTCCTCGGTAGCCTaGGCAGAAAGTCCTTTGCTCTGCAACATTTCCAGA +
Preference number: 6 (lower is better)
Translates to: SRLVLSWSSSVA*AESPLLCNISR
Trigger: TCTGGAAATGTTGCAGAGCAAAGGACTTTCTGCCAAGGCTACCGAGGAAGACCATGAGAGAACAAGACGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000538971.6
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
ENST00000592048.5
CDS CAA 72 bp CTGGATGATCTGGTCTGGGGAGGGCTTGTGATTTGTTaGATTGGAATGGGAGGATTTGAAGTGGTCATCCTC +
Preference number: 6 (lower is better)
Translates to: LDDLVWGGLVIC*IGMGGFEVVIL
Trigger: GAGGATGACCACTTCAAATCCTCCCATTCCAATCAAACAAATCACAAGCCCTCCCCAGACCAGATCATCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
CDS CAA 90 bp GGCCAGAGGTGGCATAGGCAGCATTTAAAGATTGTATATTTTCCATaGAAAGGGTTTTCCCACTGCCACCTCCAACACTGCTTCCCGAAC +
Preference number: 6 (lower is better)
Translates to: GQRWHRQHLKIVYFP*KGFSHCHLQHCFPN
Trigger: GTTCGGGAAGCAGTGTTGGAGGTGGCAGTGGGAAAACCCTTTCAATGGAAAATATACAATCTTTAAATGCTGCCTATGCCACCTCTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545318.2
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000589132.1
ENST00000611180.4
CDS CAA 90 bp TCTAAGAGTCGATCAACTTCTGCCTGGGCCTTGCTAGATTCATCTTaGTACCTGGTGATCTCTCTCTCCAAGTGCTGTATTCGGTCACTC +
Preference number: 6 (lower is better)
Translates to: SKSRSTSAWALLDSS*YLVISLSKCCIRSL
Trigger: GAGTGACCGAATACAGCACTTGGAGAGAGAGATCACCAGGTACAAAGATGAATCTAGCAAGGCCCAGGCAGAAGTTGATCGACTCTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000536573.6
ENST00000538971.6
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS CAA 90 bp AGTTGGTTTAAGGTTAATCAGAAGAAGGTCCCCAGCTGTCCAATCTaGAAGAAGTATCTTACACCATATCTGAGACTCGCGGGGCTGCGC +
Preference number: 6 (lower is better)
Translates to: SWFKVNQKKVPSCPI*KKYLTPYLRLAGLR
Trigger: GCGCAGCCCCGCGAGTCTCAGATATGGTGTAAGATACTTCTTCAAGATTGGACAGCTGGGGACCTTCTTCTGATTAACCTTAAACCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545318.2
CDS CAA 90 bp AGTTGGTTTAAGGTTAATCAGAAGAAGGTCCCCAGCTGTCCAATCTaGAAGAAGTATCTTACACCATATCGTCCTCAGGGCTGCCGCTAC +
Preference number: 6 (lower is better)
Translates to: SWFKVNQKKVPSCPI*KKYLTPYRPQGCRY
Trigger: GTAGCGGCAGCCCTGAGGACGATATGGTGTAAGATACTTCTTCAAGATTGGACAGCTGGGGACCTTCTTCTGATTAACCTTAAACCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360905.9
ENST00000543086.7
ENST00000545948.5
CDS CAA 90 bp CTTGTTCTCTCATGGTCTTCCTCGGTAGCCTTGGCAGAAAGTCCTTaGCTCTGCAACATTTCCAGAAGCTTCTTAATGGATTCATCCCGA +
Preference number: 6 (lower is better)
Translates to: LVLSWSSSVALAESP*LCNISRSFLMDSSR
Trigger: TCGGGATGAATCCATTAAGAAGCTTCTGGAAATGTTGCAGAGCAAAGGACTTTCTGCCAAGGCTACCGAGGAAGACCATGAGAGAACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000538971.6
ENST00000542302.6
ENST00000543086.7
ENST00000546231.6
ENST00000589028.5
ENST00000592048.5
CDS CAA 90 bp ACCTCCTTCAAGATTTCTAAGAGTCGATCAACTTCTGCCTGGGCCTaGCTAGATTCATCTTTGTACCTGGTGATCTCTCTCTCCAAGTGC +
Preference number: 6 (lower is better)
Translates to: TSFKISKSRSTSAWA*LDSSLYLVISLSKC
Trigger: GCACTTGGAGAGAGAGATCACCAGGTACAAAGATGAATCTAGCAAGGCCCAGGCAGAAGTTGATCGACTCTTAGAAATCTTGAAGGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000536573.6
ENST00000538971.6
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS GCA 72 bp CTGATTCCTCCTTGGACCCCCTCAGAGGACTGCTCCTaGCACGTTCCTTTATTTCTTTTTCAACAAGAGTTT +
Preference number: 6 (lower is better)
Translates to: LIPPWTPSEDCS*HVPLFLFQQEF
Trigger: AAACTCTTGTTGAAAAAGAAATAAAGGAACGTGGCAGGAGCAGTCCTCTGAGGGGGTCCAAGGAGGAATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000543151.1
CDS GCA 72 bp GTAACACTGATTCCTCCTTGGACCCCCTCAGAGGACTaGTCCTGCCACGTTCCTTTATTTCTTTTTCAACAA +
Preference number: 6 (lower is better)
Translates to: VTLIPPWTPSED*SCHVPLFLFQQ
Trigger: TTGTTGAAAAAGAAATAAAGGAACGTGGCAGGAGCAGTCCTCTGAGGGGGTCCAAGGAGGAATCAGTGTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000543151.1
CDS CAA 72 bp CGATCAACTTCTGCCTGGGCCTTGCTAGATTCATCTTaGTACCTGGTGATCTCTCTCTCCAAGTGCTGTATT +
Preference number: 6 (lower is better)
Translates to: RSTSAWALLDSS*YLVISLSKCCI
Trigger: AATACAGCACTTGGAGAGAGAGATCACCAGGTACAAAGATGAATCTAGCAAGGCCCAGGCAGAAGTTGATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000536573.6
ENST00000538971.6
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS CAA 72 bp AAGGTTAATCAGAAGAAGGTCCCCAGCTGTCCAATCTaGAAGAAGTATCTTACACCATATCGTCCTCAGGGC +
Preference number: 6 (lower is better)
Translates to: KVNQKKVPSCPI*KKYLTPYRPQG
Trigger: GCCCTGAGGACGATATGGTGTAAGATACTTCTTCAAGATTGGACAGCTGGGGACCTTCTTCTGATTAACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360905.9
ENST00000543086.7
ENST00000545948.5
CDS CAA 72 bp AAGATTTCTAAGAGTCGATCAACTTCTGCCTGGGCCTaGCTAGATTCATCTTTGTACCTGGTGATCTCTCTC +
Preference number: 6 (lower is better)
Translates to: KISKSRSTSAWA*LDSSLYLVISL
Trigger: GAGAGAGATCACCAGGTACAAAGATGAATCTAGCAAGGCCCAGGCAGAAGTTGATCGACTCTTAGAAATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000536573.6
ENST00000538971.6
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000588412.5
ENST00000589028.5
ENST00000611180.4
CDS CAA 72 bp AAGGTTAATCAGAAGAAGGTCCCCAGCTGTCCAATCTaGAAGAAGTATCTTACACCATATCTACAGCTCCGC +
Preference number: 6 (lower is better)
Translates to: KVNQKKVPSCPI*KKYLTPYLQLR
Trigger: GCGGAGCTGTAGATATGGTGTAAGATACTTCTTCAAGATTGGACAGCTGGGGACCTTCTTCTGATTAACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347735.10
ENST00000440394.7
CDS CAA 90 bp TTTTCCTCCTGTACAACTCTGTACTGTTCCTTCCAAATGGTGATTTaGGAAGCTTCATCTTTTCTCAGGGCTCGTTCCTTCTTCAGCTCT +
Preference number: 6 (lower is better)
Translates to: FSSCTTLYCSFQMVI*EASSFLRARSFFSS
Trigger: AGAGCTGAAGAAGGAACGAGCCCTGAGAAAAGATGAAGCTTCCAAAATCACCATTTGGAAGGAACAGTACAGAGTTGTACAGGAGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000592048.5
ENST00000611180.4
CDS CCA 72 bp CTACATATACTCCAAGTGTTCCTCCACCTCCTAGAATaGAAGAAAAATTCTGCCTCTGGAGAAAGTGCATGT +
Preference number: 6 (lower is better)
Translates to: LHILQVFLHLLE*KKNSASGESAC
Trigger: ACATGCACTTTCTCCAGAGGCAGAATTTTTCTTCCATTCTAGGAGGTGGAGGAACACTTGGAGTATATGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543151.1
CDS CAA 72 bp AAGGTTAATCAGAAGAAGGTCCCCAGCTGTCCAATCTaGAAGAAGTATCTTACACCATATCTCTCCAGCAAG +
Preference number: 6 (lower is better)
Translates to: KVNQKKVPSCPI*KKYLTPYLSSK
Trigger: CTTGCTGGAGAGATATGGTGTAAGATACTTCTTCAAGATTGGACAGCTGGGGACCTTCTTCTGATTAACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587595.1
CDS CAA 90 bp TCTGGGCTCCAGAAGGTCTTGATGCTATTCATTGAAGAACTCAATTaGCTCTCCTTTACTTCCACATCCTTCCGCAAGAGATCATTTTCT +
Preference number: 6 (lower is better)
Translates to: SGLQKVLMLFIEELN*LSFTSTSFRKRSFS
Trigger: AGAAAATGATCTCTTGCGGAAGGATGTGGAAGTAAAGGAGAGCAAATTGAGTTCTTCAATGAATAGCATCAAGACCTTCTGGAGCCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000347735.10
ENST00000355446.9
ENST00000360905.9
ENST00000397203.6
ENST00000440394.7
ENST00000542302.6
ENST00000543086.7
ENST00000545948.5
ENST00000546231.6
ENST00000589028.5
ENST00000592048.5
ENST00000611180.4
CDS CAA 72 bp AAGGTTAATCAGAAGAAGGTCCCCAGCTGTCCAATCTaGAAGAAGTATCTTACACCATATCATGCAACTGGA +
Preference number: 6 (lower is better)
Translates to: KVNQKKVPSCPI*KKYLTPYHATG
Trigger: TCCAGTTGCATGATATGGTGTAAGATACTTCTTCAAGATTGGACAGCTGGGGACCTTCTTCTGATTAACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542302.6
ENST00000546231.6
CDS TCA 72 bp CACAGGACTAACTTGTTTTTACAGAGATGCTATTCCTaGTACAGAAAGACTCCAGTTACCTCACAGTTTCTC +
Preference number: 6 (lower is better)
Translates to: HRTNLFLQRCYS*YRKTPVTSQFL
Trigger: GAGAAACTGTGAGGTAACTGGAGTCTTTCTGTATCAGGAATAGCATCTCTGTAAAAACAAGTTAGTCCTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543151.1
CDS CCA 72 bp GTGATGAGGGAACTCATTACGAATTCTGTCTCATCCTaGCTTATGCTCTTCTCATTTATTTCACAGAGGTTA +
Preference number: 6 (lower is better)
Translates to: VMRELITNSVSS*LMLFSFISQRL
Trigger: TAACCTCTGTGAAATAAATGAGAAGAGCATAAGCCAGGATGAGACAGAATTCGTAATGAGTTCCCTCATCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543151.1
CDS TCA 72 bp AAAACAAACACCTCTTATCTGTATCTTTCACAGATCTaGGTCACAAAATATGAAACTAAATGCAGCACGAAC +
Preference number: 6 (lower is better)
Translates to: KTNTSYLYLSQI*VTKYETKCSTN
Trigger: GTTCGTGCTGCATTTAGTTTCATATTTTGTGACTCAGATCTGTGAAAGATACAGATAAGAGGTGTTTGTTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541503.1