RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ERBIN (Homo sapiens)

Ensembl gene IDs: ENSG00000112851

Ensembl transcript IDs: ENST00000284037.10, ENST00000380935.5, ENST00000380938.6, ENST00000380943.6, ENST00000416865.6, ENST00000503913.5, ENST00000505822.1, ENST00000506030.5, ENST00000506744.1, ENST00000507490.1, ENST00000508515.1, ENST00000509946.1, ENST00000511297.5, ENST00000511671.5, ENST00000512354.1, ENST00000515185.1

Found 744 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTaGCTTGCACACAGTTCAGTCATGTATATGAAATCCAAAAATAAA +
Preference number: 1 (lower is better)
Translates to: DSSAICLWAKIKANY*LAHSSVMYMKSKNK
Trigger: TTTATTTTTGGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
3UTR-3UTR CCA 90 bp GGGCCGATTGAGAAGCTAGATGGGCAGATGCGTGACAGATCACCATTGTCCCTGAACACAGAAAATGCATaGACATGCATCTACAGTAGA +
Preference number: 2 (lower is better)
Translates to: GPIEKLDGQMRDRSPLSLNTENA*TCIYSR
Trigger: TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTT...CAGGGACAATGGTGATCTGTCACGCATCTGCCCATCTAGCTTCTCAATCGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284037.10
3UTR CAA 90 bp GGGCCGATTGAGAAGCTAGATGGGCAGATGCGTGACAGATCACCATaGTCCCTGGTTGTTACATTAGAAAAGAAAGTTGTAACAGAAGGA +
Preference number: 2 (lower is better)
Translates to: GPIEKLDGQMRDRSP*SLVVTLEKKVVTEG
Trigger: TCCTTCTGTTACAACTTTCTTTTCTAATGTAACAACCAGGGACAATGGTGATCTGTCACGCATCTGCCCATCTAGCTTCTCAATCGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284037.10
3UTR-3UTR CCA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGTCACAAAGCTTGCTTTaGTTTCCTAGCTCCAAGTGT +
Preference number: 2 (lower is better)
Translates to: PVETALYLNTFTHWQASRSQSLL*FPSSKC
Trigger: ACACTTGGAGCTAGGAAACCAAAGCAAGCTTTGTGA...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
3UTR-3UTR TCA 90 bp GGTTTGCTGAAGATCCATTGTTCCGTGAGGCTTAATTCCTTTTCCAAAATTATATCTGGCCTTGGAAAGTaGACCCACCAGCACCACCTT +
Preference number: 2 (lower is better)
Translates to: GLLKIHCSVRLNSFSKIISGLGK*THQHHL
Trigger: AAGGTGGTGCTGGTGGGTTCACTTTCCAAGGCCAGA...TATAATTTTGGAAAAGGAATTAAGCCTCACGGAACAATGGATCTTCAGCAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
3UTR-3UTR CCA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACTTATATTCTGTACAGTaGTTCTTTCCCTCTAACCAC +
Preference number: 2 (lower is better)
Translates to: IALPSVSGLKSRLTIALHLYSVQ*FFPSNH
Trigger: GTGGTTAGAGGGAAAGAACCACTGTACAGAATATAA...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
3UTR-3UTR CCA 90 bp AAGAATAAAGGGAACACCGAGACTTGTCTTAAAGAAGCTGTTTGTCATTCTTTTAACACCTTTACACACTaGCAGGCCTCAAGGACCCAT +
Preference number: 2 (lower is better)
Translates to: KNKGNTETCLKEAVCHSFNTFTH*QASRTH
Trigger: ATGGGTCCTTGAGGCCTGCCAGTGTGTAAAGGTGTT...AAAAGAATGACAAACAGCTTCTTTAAGACAAGTCTCGGTGTTCCCTTTATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
3UTR-3UTR CCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGTTATATTCTGTACAGTaGTTCTTTCCCTCTAACCAC +
Preference number: 2 (lower is better)
Translates to: IKAMREIALPSVSGLKSRLYSVQ*FFPSNH
Trigger: GTGGTTAGAGGGAAAGAACCACTGTACAGAATATAA...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
3UTR-3UTR CCA 90 bp CATAACACAGAAAATGCATGGACATGCATCTACAGTAGAGTTAAAAATTTCCTGGTTTTAGTCTGGCCTTaGAAAGTGAACCCACCAGCA +
Preference number: 2 (lower is better)
Translates to: HNTENAWTCIYSRVKNFLVLVWP*KVNPPA
Trigger: TGCTGGTGGGTTCACTTTCCAAGGCCAGACTAAAAC...CAGGAAATTTTTAACTCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
3UTR-3UTR TCA 90 bp AAGAATAAAGGGAACACCGAGACTTGTCTTAAAGAAGCTGTTTGTCATTCTTTTTATAGTCAATGGCTATaGCAAGAACAGATCCTGCCG +
Preference number: 2 (lower is better)
Translates to: KNKGNTETCLKEAVCHSFYSQWL*QEQILP
Trigger: CGGCAGGATCTGTTCTTGTCATAGCCATTGACTATA...AAAAGAATGACAAACAGCTTCTTTAAGACAAGTCTCGGTGTTCCCTTTATTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
3UTR-3UTR GCA 90 bp TACACTGATACACATAGAAACCCTTTAAAGACTCTGGAAGTGTTGAGTTCACATGACAAGAACAGATCCTaGCGAGCTCATAAATGCAAT +
Preference number: 2 (lower is better)
Translates to: YTDTHRNPLKTLEVLSSHDKNRS*RAHKCN
Trigger: ATTGCATTTATGAGCTCGGCAGGATCTGTTCTTGTC...ATGTGAACTCAACACTTCCAGAGTCTTTAAAGGGTTTCTATGTGTATCAGTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
3UTR-3UTR CCA 90 bp GAAAGTTGTAACAGAAGGATTCTTTTTGTCAGCCTCTCTCCTAAAGATTCTATATCTGCCATCTGTCTCTaGGCTAAAATCAAGGCTAAC +
Preference number: 2 (lower is better)
Translates to: ESCNRRILFVSLSPKDSISAICL*AKIKAN
Trigger: GTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGA...TATAGAATCTTTAGGAGAGAGGCTGACAAAAAGAATCCTTCTGTTACAACTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284037.10
3UTR-3UTR GCA 90 bp AAGAATAAAGGGAACACCGAGACTTGTCTTAAAGAAGCTGTTTGTCATTCTTTTATCAAGGCTAACTATTaGCTTGCACACAGTTCAGTC +
Preference number: 2 (lower is better)
Translates to: KNKGNTETCLKEAVCHSFIKANY*LAHSSV
Trigger: GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGAT...AAAAGAATGACAAACAGCTTCTTTAAGACAAGTCTCGGTGTTCCCTTTATTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
3UTR-3UTR GCA 90 bp ACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTCAAATCTCTTATCAAGGCTAACTATTaGCTTGCACACAGTTCAGTC +
Preference number: 2 (lower is better)
Translates to: THSSIQYAHSKSQHFKSLIKANY*LAHSSV
Trigger: GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGAT...AAGAGATTTGAAGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
3UTR-3UTR GCA 90 bp CATAACACAGAAAATGCATGGACATGCATCTACAGTAGAGTTAAAAATTTCCTGCCCATCCCCATTCTTTaGTTCCAGATTTTTATAGAA +
Preference number: 2 (lower is better)
Translates to: HNTENAWTCIYSRVKNFLPIPIL*FQIFIE
Trigger: TTCTATAAAAATCTGGAAGCAAAGAATGGGGATGGG...CAGGAAATTTTTAACTCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
3UTR-3UTR GCA 90 bp GGTTTGCTGAAGATCCATTGTTCCGTGAGGCTTAATTCCTTTTCCAAAATTATAGAAAATGCATGGACATaGATCTACAGTAGAGTTAAA +
Preference number: 2 (lower is better)
Translates to: GLLKIHCSVRLNSFSKIIENAWT*IYSRVK
Trigger: TTTAACTCTACTGTAGATGCATGTCCATGCATTTTC...TATAATTTTGGAAAAGGAATTAAGCCTCACGGAACAATGGATCTTCAGCAAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
3UTR-3UTR CAA 90 bp GGGCCGATTGAGAAGCTAGATGGGCAGATGCGTGACAGATCACCATTGTCCCTGAACCTTCGTAACATTTaGTGTTACAGGCAACACAAT +
Preference number: 3 (lower is better)
Translates to: GPIEKLDGQMRDRSPLSLNLRNI*CYRQHN
Trigger: ATTGTGTTGCCTGTAACACAAAATGTTACGAAGGTT...CAGGGACAATGGTGATCTGTCACGCATCTGCCCATCTAGCTTCTCAATCGGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284037.10
3UTR-3UTR CAA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGCCAGTTTCACAAAGCTaGCTTTGGTTTCCTAGCTCC +
Preference number: 3 (lower is better)
Translates to: PVETALYLNTFTHWQASRPVSQS*LWFPSS
Trigger: GGAGCTAGGAAACCAAAGCAAGCTTTGTGAAACTGG...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
3UTR-3UTR CAA 90 bp GGGCCGATTGAGAAGCTAGATGGGCAGATGCGTGACAGATCACCATTGTCCCTGAACAAAGAAAGGCAGTaGGTGGTAAAACACTATTAC +
Preference number: 3 (lower is better)
Translates to: GPIEKLDGQMRDRSPLSLNKERQ*VVKHYY
Trigger: GTAATAGTGTTTTACCACCAACTGCCTTTCTTTGTT...CAGGGACAATGGTGATCTGTCACGCATCTGCCCATCTAGCTTCTCAATCGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284037.10
3UTR-3UTR CAA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGAGGCTAACTATTGCCTaGCACACAGTTCAGTCATGT +
Preference number: 3 (lower is better)
Translates to: PVETALYLNTFTHWQASRRLTIA*HTVQSC
Trigger: ACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCT...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
3UTR CCA 72 bp AGGCTTTCTCAGCTTAGGATGAGCTTCTCAGGTGGTTaGATATTAGGACTGTACGTTATAGCTGACCACAGA +
Preference number: 3 (lower is better)
Translates to: RLSQLRMSFSGG*ILGLYVIADHR
Trigger: TCTGTGGTCAGCTATAACGTACAGTCCTAATATCCAACCACCTGAGAAGCTCATCCTAAGCTGAGAAAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284037.10
3UTR-3UTR CAA 90 bp ACCCTTCCAAATAGATTTCACACGTCAATCTCCATCAGAGAAACATTTCCCATCTGTTTTAGTCTGGCCTaGGAAAGTGAACCCACCAGC +
Preference number: 3 (lower is better)
Translates to: TLPNRFHTSISIRETFPICFSLA*ESEPTS
Trigger: GCTGGTGGGTTCACTTTCCAAGGCCAGACTAAAACA...GATGGGAAATGTTTCTCTGATGGAGATTGACGTGTGAAATCTATTTGGAAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284037.10
3UTR CCA 72 bp AAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTaGGCTAAAATCAAGGCTAACTATTGCCTTGCACAC +
Preference number: 3 (lower is better)
Translates to: KSYERDSSAICL*AKIKANYCLAH
Trigger: GTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
3UTR GCA 72 bp GCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTaGCTTGCACACAGTTCAGTCATGTATATGAAATCC +
Preference number: 3 (lower is better)
Translates to: AICLWAKIKANY*LAHSSVMYMKS
Trigger: GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
3UTR-3UTR CAA 90 bp GGTTTGCTGAAGATCCATTGTTCCGTGAGGCTTAATTCCTTTTCCAAAATTATACAAGGACCCATCCCTTaGCTCTATAACTCTCCACAG +
Preference number: 3 (lower is better)
Translates to: GLLKIHCSVRLNSFSKIIQGPIP*LYNSPQ
Trigger: CTGTGGAGAGTTATAGAGCAAAGGGATGGGTCCTTG...TATAATTTTGGAAAAGGAATTAAGCCTCACGGAACAATGGATCTTCAGCAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
3UTR-3UTR CAA 90 bp TACACTGATACACATAGAAACCCTTTAAAGACTCTGGAAGTGTTGAGTTCACATAGGCTAACTATTGCCTaGCACACAGTTCAGTCATGT +
Preference number: 3 (lower is better)
Translates to: YTDTHRNPLKTLEVLSSHRLTIA*HTVQSC
Trigger: ACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCT...ATGTGAACTCAACACTTCCAGAGTCTTTAAAGGGTTTCTATGTGTATCAGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
3UTR TCA 72 bp CTCAGGTGGTTGGATATTAGGACTGTACGTTATAGCTaGCCACAGATTCTAATCTTGAAAAACTGCTTCATG +
Preference number: 3 (lower is better)
Translates to: LRWLDIRTVRYS*PQILILKNCFM
Trigger: CATGAAGCAGTTTTTCAAGATTAGAATCTGTGGTCAGCTATAACGTACAGTCCTAATATCCAACCACCTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284037.10
3UTR-3UTR CAA 90 bp ACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTCAAATCTCTTAGGCTAACTATTGCCTaGCACACAGTTCAGTCATGT +
Preference number: 3 (lower is better)
Translates to: THSSIQYAHSKSQHFKSLRLTIA*HTVQSC
Trigger: ACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCT...AAGAGATTTGAAGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
3UTR TCA 72 bp TGCTGCCTACTTACTCTGACTAGCAAGAATGGAAAGTaGGTCCAACTCACTTTTGCAAAAATAATGTTGGTT +
Preference number: 3 (lower is better)
Translates to: CCLLTLTSKNGK*VQLTFAKIMLV
Trigger: AACCAACATTATTTTTGCAAAAGTGAGTTGGACTCACTTTCCATTCTTGCTAGTCAGAGTAAGTAGGCAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp GGGCCGATTGAGAAGCTAGATGGGCAGATGCGTGACAGATCACCATTGTCCCTGAATATCTCTCTCGGGTaGGAGCGGATGTGGACTGGC +
Preference number: 4 (lower is better)
Translates to: GPIEKLDGQMRDRSPLSLNISLG*ERMWTG
Trigger: GCCAGTCCACATCCGCTCTCACCCGAGAGAGATATT...CAGGGACAATGGTGATCTGTCACGCATCTGCCCATCTAGCTTCTCAATCGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR TCA 90 bp GGGCCGATTGAGAAGCTAGATGGGCAGATGCGTGACAGATCACCATTGTCCCTGCATCATCATCAGGTCTaGATGGGTTTCCTCTACCCC +
Preference number: 4 (lower is better)
Translates to: GPIEKLDGQMRDRSPLSLHHHQV*MGFLYP
Trigger: GGGGTAGAGGAAACCCATTCAGACCTGATGATGATG...CAGGGACAATGGTGATCTGTCACGCATCTGCCCATCTAGCTTCTCAATCGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR GCA 90 bp GGGCCGATTGAGAAGCTAGATGGGCAGATGCGTGACAGATCACCATTGTCCCTGCATTTCCCCATGTCTTaGTGGGCCAAGTCTCTGATG +
Preference number: 4 (lower is better)
Translates to: GPIEKLDGQMRDRSPLSLHFPMS*WAKSLM
Trigger: CATCAGAGACTTGGCCCAGCAAGACATGGGGAAATG...CAGGGACAATGGTGATCTGTCACGCATCTGCCCATCTAGCTTCTCAATCGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR GCA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGCCTGGTCTCGAGTTTTaGAGGAGTTTCCCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: PVETALYLNTFTHWQASRPGLEF*RSFPAP
Trigger: TGGGGCTGGGAAACTCCTGCAAAACTCGAGACCAGG...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTAAGTCGGTCGTTTGGTaGGATGGCCCACATTTCCCC +
Preference number: 4 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVKSVVW*DGPHFP
Trigger: GGGGAAATGTGGGCCATCTCACCAAACGACCGACTT...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACTCTCCTTCAGGAATCTaGGCCCGCCTTGTAGAGCCT +
Preference number: 4 (lower is better)
Translates to: IALPSVSGLKSRLTIALHSPSGI*ARLVEP
Trigger: AGGCTCTACAAGGCGGGCTCAGATTCCTGAAGGAGA...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCTGCGGGCTGGCTTCCTaGTCTCGAGTTTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVCGLAS*SRVLQE
Trigger: CTCCTGCAAAACTCGAGACCAGGAAGCCAGCCCGCA...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTAGAGCGGATGTGGACTaGCCTCCCACAGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVRADVD*PPTEEE
Trigger: CTCTTCTTCTGTGGGAGGCCAGTCCACATCCGCTCT...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
CDS-3UTR CCA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACAGAGCGGATGTGGACTaGCCTCCCACAGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: IALPSVSGLKSRLTIALHRADVD*PPTEEE
Trigger: CTCTTCTTCTGTGGGAGGCCAGTCCACATCCGCTCT...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
CDS-3UTR CCA 90 bp GGGCCGATTGAGAAGCTAGATGGGCAGATGCGTGACAGATCACCATTGTCCCTGTTTAACGGTTGTACTTaGCTGCTGAGGTCCATTATC +
Preference number: 4 (lower is better)
Translates to: GPIEKLDGQMRDRSPLSLFNGCT*LLRSII
Trigger: GATAATGGACCTCAGCAGCCAAGTACAACCGTTAAA...CAGGGACAATGGTGATCTGTCACGCATCTGCCCATCTAGCTTCTCAATCGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR TCA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGACTGGACCACTTTTCTaGGGGGAGAGATCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: PVETALYLNTFTHWQASRTGPLF*GERSSV
Trigger: CACTGAAGATCTCTCCCCTCAGAAAAGTGGTCCAGT...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAAAAGTCGGTCGTTTGGTaGGATGGCCCACATTTCCCC +
Preference number: 4 (lower is better)
Translates to: KGIKAMREIALPSVSGLKKSVVW*DGPHFP
Trigger: GGGGAAATGTGGGCCATCTCACCAAACGACCGACTT...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCTCCTTCAGGAATCTaGGCCCGCCTTGTAGAGCCT +
Preference number: 4 (lower is better)
Translates to: KGIKAMREIALPSVSGLKSPSGI*ARLVEP
Trigger: AGGCTCTACAAGGCGGGCTCAGATTCCTGAAGGAGA...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCTCTCCTTCAGGAATCTaGGCCCGCCTTGTAGAGCCT +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVSPSGI*ARLVEP
Trigger: AGGCTCTACAAGGCGGGCTCAGATTCCTGAAGGAGA...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACAGAAAGGGGTCTCTGTaGTCCTGGCATCATTGGAGG +
Preference number: 4 (lower is better)
Translates to: IALPSVSGLKSRLTIALHRKGSL*SWHHWR
Trigger: CCTCCAATGATGCCAGGATCACAGAGACCCCTTTCT...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTGAGGGTCGAGCACTCTaGGGTCTTGATGCATTTGGA +
Preference number: 4 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVEGRAL*GLDAFG
Trigger: TCCAAATGCATCAAGACCTCAGAGTGCTCGACCCTC...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGCATTTCCCCATGTCTTaGTGGGCCAAGTCTCTGATG +
Preference number: 4 (lower is better)
Translates to: PVETALYLNTFTHWQASRHFPMS*WAKSLM
Trigger: CATCAGAGACTTGGCCCAGCAAGACATGGGGAAATG...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp GGGCCGATTGAGAAGCTAGATGGGCAGATGCGTGACAGATCACCATTGTCCCTGGGATCTAATAAAGAATaGTCAGAACCAACCCTTGCA +
Preference number: 4 (lower is better)
Translates to: GPIEKLDGQMRDRSPLSLGSNKE*SEPTLA
Trigger: TGCAAGGGTTGGTTCTGAGCATTCTTTATTAGATCC...CAGGGACAATGGTGATCTGTCACGCATCTGCCCATCTAGCTTCTCAATCGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR GCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGTCTAGAGGGATGCCTTaGCACAGATGCCTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRSRGMP*HRCLRG
Trigger: CCCCCTCAGGCATCTGTGGCAAGGCATCCCTCTAGA...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380938.6
ENST00000380943.6
CDS-3UTR CCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCTTGAGGTGCAGATTGTaGGCCACTTGTGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVLRCRL*ATCGAS
Trigger: AGAGGCCCCACAAGTGGCCCACAATCTGCACCTCAA...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATTGAGGTGCAGATTGTaGGCCACTTGTGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: KGIKAMREIALPSVSGLKLRCRL*ATCGAS
Trigger: AGAGGCCCCACAAGTGGCCCACAATCTGCACCTCAA...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTGGTCGTTTGGTGAGATaGCCCACATTTCCCCATGTC +
Preference number: 4 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVGRLVR*PTFPHV
Trigger: GACATGGGGAAATGTGGGCCATCTCACCAAACGACC...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGGTATATGGAGGCTGGTaGGCCACTTTCAGCATCAAG +
Preference number: 4 (lower is better)
Translates to: PVETALYLNTFTHWQASRVYGGW*ATFSIK
Trigger: CTTGATGCTGAAAGTGGCCCACCAGCCTCCATATAC...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380943.6
CDS-3UTR CCA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGATCATCAGGTCTGAATaGGTTTCCTCTACCCCCGAC +
Preference number: 4 (lower is better)
Translates to: PVETALYLNTFTHWQASRIIRSE*VSSTPD
Trigger: GTCGGGGGTAGAGGAAACCCATTCAGACCTGATGAT...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
3UTR CAA 72 bp CCTTTACACACTGGCAGGCCTCAAGGACCCATCCCTTaGCTCTATAACTCTCCACAGCAATTCTCTATCACT +
Preference number: 4 (lower is better)
Translates to: PLHTGRPQGPIP*LYNSPQQFSIT
Trigger: AGTGATAGAGAATTGCTGTGGAGAGTTATAGAGCAAAGGGATGGGTCCTTGAGGCCTGCCAGTGTGTAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGAATATCTCTCTCGGGTaGGAGCGGATGTGGACTGGC +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRNISLG*ERMWTG
Trigger: GCCAGTCCACATCCGCTCTCACCCGAGAGAGATATT...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
CDS-3UTR TCA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGAGGCTTCGCTTGACATaGTTTCCTTCCCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: PVETALYLNTFTHWQASRRLRLT*FPSLHQ
Trigger: CTGATGAAGGGAAGGAAATCATGTCAAGCGAAGCCT...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACCACTGGAGAGCAGAGTaGGGTGTCTTGACTACTATC +
Preference number: 4 (lower is better)
Translates to: IALPSVSGLKSRLTIALHHWRAE*GVLTTI
Trigger: GATAGTAGTCAAGACACCTCACTCTGCTCTCCAGTG...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCACTGGAGAGCAGAGTaGGGTGTCTTGACTACTATC +
Preference number: 4 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVHWRAE*GVLTTI
Trigger: GATAGTAGTCAAGACACCTCACTCTGCTCTCCAGTG...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGATTTTCTGTGCTCTCTaGTCTAGGAAGGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: PVETALYLNTFTHWQASRIFCAL*SRKELR
Trigger: CCTCAGCTCCTTCCTAGATCAGAGAGCACAGAAAAT...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGAAGTCGGTCGTTTGGTaGGATGGCCCACATTTCCCC +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRKSVVW*DGPHFP
Trigger: GGGGAAATGTGGGCCATCTCACCAAACGACCGACTT...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTAAGTCGGTCGTTTGGTaGGATGGCCCACATTTCCCC +
Preference number: 4 (lower is better)
Translates to: MREIALPSVSGLKSRLTIKSVVW*DGPHFP
Trigger: GGGGAAATGTGGGCCATCTCACCAAACGACCGACTT...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCAGAAAGGGGTCTCTGTaGTCCTGGCATCATTGGAGG +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVRKGSL*SWHHWR
Trigger: CCTCCAATGATGCCAGGATCACAGAGACCCCTTTCT...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCATCATCATCAGGTCTaGATGGGTTTCCTCTACCCC +
Preference number: 4 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVHHHQV*MGFLYP
Trigger: GGGGTAGAGGAAACCCATTCAGACCTGATGATGATG...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCCTGGTCTCGAGTTTTaGAGGAGTTTCCCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRPGLEF*RSFPAP
Trigger: TGGGGCTGGGAAACTCCTGCAAAACTCGAGACCAGG...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGTCCCTCCCTGGGAGGTaGCTCCCTTTCATCTTTGTC +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRSLPGR*LPFIFV
Trigger: GACAAAGATGAAAGGGAGGCACCTCCCAGGGAGGGA...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTTCCCTCCCTGGGAGGTaGCTCCCTTTCATCTTTGTC +
Preference number: 4 (lower is better)
Translates to: MREIALPSVSGLKSRLTISLPGR*LPFIFV
Trigger: GACAAAGATGAAAGGGAGGCACCTCCCAGGGAGGGA...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACCATTTCCCCATGTCTTaGTGGGCCAAGTCTCTGATG +
Preference number: 4 (lower is better)
Translates to: IALPSVSGLKSRLTIALHHFPMS*WAKSLM
Trigger: CATCAGAGACTTGGCCCAGCAAGACATGGGGAAATG...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGAAGGACCCATCCCTTTaGTCTATAACTCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: PVETALYLNTFTHWQASRKDPSL*SITLHS
Trigger: GCTGTGGAGAGTTATAGAGCAAAGGGATGGGTCCTT...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGTTAAATTTCCCTCCCTaGGAGGTGCCTCCCTTTCAT +
Preference number: 4 (lower is better)
Translates to: PVETALYLNTFTHWQASRLNFPP*EVPPFH
Trigger: ATGAAAGGGAGGCACCTCCCAGGGAGGGAAATTTAA...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAAATGGGGCTGTGTATATaGAGGCTGGTGGGCCACTTT +
Preference number: 4 (lower is better)
Translates to: KGIKAMREIALPSVSGLKMGLCI*RLVGHF
Trigger: AAAGTGGCCCACCAGCCTCCATATACACAGCCCCAT...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380938.6
ENST00000380943.6
CDS-3UTR CCA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACATCATCAGGTCTGAATaGGTTTCCTCTACCCCCGAC +
Preference number: 4 (lower is better)
Translates to: IALPSVSGLKSRLTIALHIIRSE*VSSTPD
Trigger: GTCGGGGGTAGAGGAAACCCATTCAGACCTGATGAT...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTAGGCTTCGCTTGACATaGTTTCCTTCCCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVRLRLT*FPSLHQ
Trigger: CTGATGAAGGGAAGGAAATCATGTCAAGCGAAGCCT...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
CDS-3UTR TCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCCACTGGAGAGCAGAGTaGGGTGTCTTGACTACTATC +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVHWRAE*GVLTTI
Trigger: GATAGTAGTCAAGACACCTCACTCTGCTCTCCAGTG...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTATTTTCTGTGCTCTCTaGTCTAGGAAGGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVIFCAL*SRKELR
Trigger: CCTCAGCTCCTTCCTAGATCAGAGAGCACAGAAAAT...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ACCCTTCCAAATAGATTTCACACGTCAATCTCCATCAGAGAAACATTTCCCATCTCTCCTTCAGGAATCTaGGCCCGCCTTGTAGAGCCT +
Preference number: 4 (lower is better)
Translates to: TLPNRFHTSISIRETFPISPSGI*ARLVEP
Trigger: AGGCTCTACAAGGCGGGCTCAGATTCCTGAAGGAGA...GATGGGAAATGTTTCTCTGATGGAGATTGACGTGTGAAATCTATTTGGAAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR TCA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTAGAAAGGGGTCTCTGTaGTCCTGGCATCATTGGAGG +
Preference number: 4 (lower is better)
Translates to: MREIALPSVSGLKSRLTIRKGSL*SWHHWR
Trigger: CCTCCAATGATGCCAGGATCACAGAGACCCCTTTCT...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTCTGGCCTTGGAAAGTaGACCCACCAGCACCACCTT +
Preference number: 4 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTSGLGK*THQHHL
Trigger: AAGGTGGTGCTGGTGGGTTCACTTTCCAAGGCCAGA...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGTATAGTCAATGGCTATaGCAAGAACAGATCCTGCCG +
Preference number: 4 (lower is better)
Translates to: PVETALYLNTFTHWQASRYSQWL*QEQILP
Trigger: CGGCAGGATCTGTTCTTGTCATAGCCATTGACTATA...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGGCTGCCTACTTACTCTaGCTAGCAAGAATGGAAAGT +
Preference number: 4 (lower is better)
Translates to: PVETALYLNTFTHWQASRAAYLL*LARMES
Trigger: ACTTTCCATTCTTGCTAGTCAGAGTAAGTAGGCAGC...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp GGGCCGATTGAGAAGCTAGATGGGCAGATGCGTGACAGATCACCATTGTCCCTGGAACTTGTTCTAAGCTaGAATGAGAATAATCAAGAG +
Preference number: 4 (lower is better)
Translates to: GPIEKLDGQMRDRSPLSLELVLS*NENNQE
Trigger: CTCTTGATTATTCTCATTGCAGCTTAGAACAAGTTC...CAGGGACAATGGTGATCTGTCACGCATCTGCCCATCTAGCTTCTCAATCGGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR GCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCCATTTCCCCATGTCTTaGTGGGCCAAGTCTCTGATG +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVHFPMS*WAKSLM
Trigger: CATCAGAGACTTGGCCCAGCAAGACATGGGGAAATG...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTCTGCCCTGGCTGCCATaGAGATCCCTAGAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFLPWLP*RSLELP
Trigger: TGGCAGCTCTAGGGATCTGCATGGCAGCCAGGGCAG...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416865.6
CDS-3UTR CCA 90 bp AAATCAGTGGATTTCCATAACACAGAAAATGCATGGACATGCATCTACAGTAGAGGTTGGGGTGCGGGCTaGCTTCCTGGTCTCGAGTTT +
Preference number: 4 (lower is better)
Translates to: KSVDFHNTENAWTCIYSRGWGAG*LPGLEF
Trigger: AAACTCGAGACCAGGAAGCCAGCCCGCACCCCAACC...TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATGGAAATCCACTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCACAACAGATCCAACTaGACCACTTTTCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVHNRSN*TTFLRG
Trigger: TCCCCTCAGAAAAGTGGTCCAGTTGGATCTGTTGTG...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGGTCGTTTGGTGAGATaGCCCACATTTCCCCATGTC +
Preference number: 4 (lower is better)
Translates to: MREIALPSVSGLKSRLTIGRLVR*PTFPHV
Trigger: GACATGGGGAAATGTGGGCCATCTCACCAAACGACC...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGATGGGGCTGTGTATATaGAGGCTGGTGGGCCACTTT +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRMGLCI*RLVGHF
Trigger: AAAGTGGCCCACCAGCCTCCATATACACAGCCCCAT...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380938.6
ENST00000380943.6
CDS-3UTR CCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATCATCAGGTCTGAATaGGTTTCCTCTACCCCCGAC +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVIIRSE*VSSTPD
Trigger: GTCGGGGGTAGAGGAAACCCATTCAGACCTGATGAT...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCAACACCTTTACACACTaGCAGGCCTCAAGGACCCAT +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVNTFTH*QASRTH
Trigger: ATGGGTCCTTGAGGCCTGCCAGTGTGTAAAGGTGTT...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCAGGCTTCGCTTGACATaGTTTCCTTCCCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVRLRLT*FPSLHQ
Trigger: CTGATGAAGGGAAGGAAATCATGTCAAGCGAAGCCT...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
CDS-3UTR TCA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACTTTCAAGGCTTCGCTTaGCATGATTTCCTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: IALPSVSGLKSRLTIALHFQGFA*HDFLPF
Trigger: GAAGGGAAGGAAATCATGTCAAGCGAAGCCTTGAAA...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
CDS-3UTR TCA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACAAGCTGCCCAATAGATaGAGGCAAAGCTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: IALPSVSGLKSRLTIALHKLPNR*RQSFNF
Trigger: GAAGTTGAAGCTTTGCCTTCATCTATTGGGCAGCTT...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCCATTCAAATGCAACTTaGGCCCGCTGTTTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVHSNAT*ARCFLC
Trigger: ACAGAGGAAACAGCGGGCTCAAGTTGCATTTGAATG...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGATCAGCTGTGGCTGTTaGGTCAACACTTTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: PVETALYLNTFTHWQASRISCGC*VNTFLN
Trigger: ATTGAGAAAAGTGTTGACTCAACAGCCACAGCTGAT...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACGTTGTACTTGGCTGCTaGGGTCCATTATCACTAAGA +
Preference number: 4 (lower is better)
Translates to: IALPSVSGLKSRLTIALHVVLGC*GPLSLR
Trigger: TCTTAGTGATAATGGACCTCAGCAGCCAAGTACAAC...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGAATACCTGCAATGGTTaGTCATACAACAGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: PVETALYLNTFTHWQASRNTCNG*SYNSVA
Trigger: TGCCACACTGTTGTATGATCAACCATTGCAGGTATT...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGGAGGACCATATATTTaGGGTGCAGATTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: MREIALPSVSGLKSRLTIGGPYI*GADCGP
Trigger: TGGCCCACAATCTGCACCTCAAATATATGGTCCTCC...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCACAAAGTGTCTTTaGCTGCAGCACTGCTACTGT +
Preference number: 4 (lower is better)
Translates to: MREIALPSVSGLKSRLTIATKCL*LQHCYC
Trigger: ACAGTAGCAGTGCTGCAGTCAAAGACACTTTGTGGC...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCGCTGGGCCAAGTCTCTaGTGTAAATGGTATGCAGTA +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVAGPSL*CKWYAV
Trigger: TACTGCATACCATTTACATCAGAGACTTGGCCCAGC...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAAGCTGGGCCAAGTCTCTaGTGTAAATGGTATGCAGTA +
Preference number: 4 (lower is better)
Translates to: KGIKAMREIALPSVSGLKAGPSL*CKWYAV
Trigger: TACTGCATACCATTTACATCAGAGACTTGGCCCAGC...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTAGAAAGGGGTCTCTGTaGTCCTGGCATCATTGGAGG +
Preference number: 4 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTRKGSL*SWHHWR
Trigger: CCTCCAATGATGCCAGGATCACAGAGACCCCTTTCT...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCAATTTGCCTGAGGCCTaGGAGGCTGGCCCATCTGTC +
Preference number: 4 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSNLPEA*EAGPSV
Trigger: GACAGATGGGCCAGCCTCTCAGGCCTCAGGCAAATT...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380938.6
ENST00000380943.6
CDS-3UTR TCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTAATTTGCCTGAGGCCTaGGAGGCTGGCCCATCTGTC +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFNLPEA*EAGPSV
Trigger: GACAGATGGGCCAGCCTCTCAGGCCTCAGGCAAATT...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000284037.10
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
CDS-3UTR TCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGACCCCCGACACCACCTaGTATGCTAAATCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRTPDTT*YAKSKF
Trigger: GAACTTGGATTTAGCATATCAGGTGGTGTCGGGGGT...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTTATAGTCAATGGCTATaGCAAGAACAGATCCTGCCG +
Preference number: 4 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVYSQWL*QEQILP
Trigger: CGGCAGGATCTGTTCTTGTCATAGCCATTGACTATA...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATTTCTCAGCTTAGGATaGGCTTCTCAGGTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: KGIKAMREIALPSVSGLKFLSLG*ASQVVG
Trigger: TCCAACCACCTGAGAAGCTCATCCTAAGCTGAGAAA...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR GCA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGCAAAGTGTCTTTGACTaGAGCACTGCTACTGTATTG +
Preference number: 4 (lower is better)
Translates to: PVETALYLNTFTHWQASRQSVFD*STATVL
Trigger: CAATACAGTAGCAGTGCTGCAGTCAAAGACACTTTG...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTCTAGAGGGATGCCTTaGCACAGATGCCTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPASRGMP*HRCLRG
Trigger: CCCCCTCAGGCATCTGTGGCAAGGCATCCCTCTAGA...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284037.10
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
CDS-3UTR GCA 90 bp AAATCAGTGGATTTCCATAACACAGAAAATGCATGGACATGCATCTACAGTAGATCTAGAGGGATGCCTTaGCACAGATGCCTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: KSVDFHNTENAWTCIYSRSRGMP*HRCLRG
Trigger: CCCCCTCAGGCATCTGTGGCAAGGCATCCCTCTAGA...TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATGGAAATCCACTGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380943.6
CDS-3UTR GCA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGATCAAGGCTAACTATTaGCTTGCACACAGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: PVETALYLNTFTHWQASRIKANY*LAHSSV
Trigger: GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGAT...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp AAATCAGTGGATTTCCATAACACAGAAAATGCATGGACATGCATCTACAGTAGATGCGGGCTGGCTTCCTaGTCTCGAGTTTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: KSVDFHNTENAWTCIYSRCGLAS*SRVLQE
Trigger: CTCCTGCAAAACTCGAGACCAGGAAGCCAGCCCGCA...TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATGGAAATCCACTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTTGCGGGCTGGCTTCCTaGTCTCGAGTTTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFCGLAS*SRVLQE
Trigger: CTCCTGCAAAACTCGAGACCAGGAAGCCAGCCCGCA...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
ENST00000416865.6
CDS-3UTR CCA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATTAAATTTCCCTCCCTaGGAGGTGCCTCCCTTTCAT +
Preference number: 4 (lower is better)
Translates to: KGIKAMREIALPSVSGLKLNFPP*EVPPFH
Trigger: ATGAAAGGGAGGCACCTCCCAGGGAGGGAAATTTAA...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAACACAACAGATCCAACTaGACCACTTTTCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: KGIKAMREIALPSVSGLKHNRSN*TTFLRG
Trigger: TCCCCTCAGAAAAGTGGTCCAGTTGGATCTGTTGTG...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCTGGCATGGTCTATTTaGGGATTTTGTTTGGAGTGC +
Preference number: 4 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVLAWSI*GFCLEC
Trigger: GCACTCCAAACAAAATCCCCAAATAGACCATGCCAG...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACCTGGCATGGTCTATTTaGGGATTTTGTTTGGAGTGC +
Preference number: 4 (lower is better)
Translates to: IALPSVSGLKSRLTIALHLAWSI*GFCLEC
Trigger: GCACTCCAAACAAAATCCCCAAATAGACCATGCCAG...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGGTATATGGAGGCTGGTaGGCCACTTTCAGCATCAAG +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRVYGGW*ATFSIK
Trigger: CTTGATGCTGAAAGTGGCCCACCAGCCTCCATATAC...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380938.6
ENST00000380943.6
CDS-3UTR CCA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTTGTGTATATGGAGGCTaGTGGGCCACTTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: MREIALPSVSGLKSRLTICVYGG*WATFSI
Trigger: GATGCTGAAAGTGGCCCACCAGCCTCCATATACACA...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380938.6
ENST00000380943.6
CDS-3UTR CCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGATCATCAGGTCTGAATaGGTTTCCTCTACCCCCGAC +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRIIRSE*VSSTPD
Trigger: GTCGGGGGTAGAGGAAACCCATTCAGACCTGATGAT...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCGTTTTAGTCTGGCCTTaGAAAGTGAACCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVVLVWP*KVNPPA
Trigger: TGCTGGTGGGTTCACTTTCCAAGGCCAGACTAAAAC...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTAACACCTTTACACACTaGCAGGCCTCAAGGACCCAT +
Preference number: 4 (lower is better)
Translates to: MREIALPSVSGLKSRLTINTFTH*QASRTH
Trigger: ATGGGTCCTTGAGGCCTGCCAGTGTGTAAAGGTGTT...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGAACACCTTTACACACTaGCAGGCCTCAAGGACCCAT +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRNTFTH*QASRTH
Trigger: ATGGGTCCTTGAGGCCTGCCAGTGTGTAAAGGTGTT...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTAATATCTCTCTCGGGTaGGAGCGGATGTGGACTGGC +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPANISLG*ERMWTG
Trigger: GCCAGTCCACATCCGCTCTCACCCGAGAGAGATATT...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
CDS-3UTR TCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTAATATCTCTCTCGGGTaGGAGCGGATGTGGACTGGC +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFNISLG*ERMWTG
Trigger: GCCAGTCCACATCCGCTCTCACCCGAGAGAGATATT...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
CDS-3UTR TCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCTTTCAAGGCTTCGCTTaGCATGATTTCCTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVFQGFA*HDFLPF
Trigger: GAAGGGAAGGAAATCATGTCAAGCGAAGCCTTGAAA...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
CDS-3UTR TCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCCTTCAGGCACTTCCGTaGATTCGTTACTTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVLQALP*IRYFPN
Trigger: ATTTGGGAAGTAACGAATTCACGGAAGTGCCTGAAG...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGAGTATTAAGAGAAACTaGATCAGACATCCGAGATGG +
Preference number: 4 (lower is better)
Translates to: PVETALYLNTFTHWQASRSIKRN*IRHPRW
Trigger: CCATCTCGGATGTCTGATTCAGTTTCTCTTAATACT...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACATCAGCTGTGGCTGTTaGGTCAACACTTTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: IALPSVSGLKSRLTIALHISCGC*VNTFLN
Trigger: ATTGAGAAAAGTGTTGACTCAACAGCCACAGCTGAT...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTACTGGACCACTTTTCTaGGGGGAGAGATCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTTGPLF*GERSSV
Trigger: CACTGAAGATCTCTCCCCTCAGAAAAGTGGTCCAGT...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAAGTTGTACTTGGCTGCTaGGGTCCATTATCACTAAGA +
Preference number: 4 (lower is better)
Translates to: KGIKAMREIALPSVSGLKVVLGC*GPLSLR
Trigger: TCTTAGTGATAATGGACCTCAGCAGCCAAGTACAAC...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCTGGGCCAAGTCTCTaGTGTAAATGGTATGCAGTA +
Preference number: 4 (lower is better)
Translates to: MREIALPSVSGLKSRLTIAGPSL*CKWYAV
Trigger: TACTGCATACCATTTACATCAGAGACTTGGCCCAGC...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTAAGTCGGTCGTTTGGTaGGATGGCCCACATTTCCCC +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAKSVVW*DGPHFP
Trigger: GGGGAAATGTGGGCCATCTCACCAAACGACCGACTT...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCAGCACTCTGAGGTCTTaGTGCATTTGGACCATCTAT +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVSTLRS*CIWTIY
Trigger: ATAGATGGTCCAAATGCATCAAGACCTCAGAGTGCT...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp TACACTGATACACATAGAAACCCTTTAAAGACTCTGGAAGTGTTGAGTTCACATTCTGGCCTTGGAAAGTaGACCCACCAGCACCACCTT +
Preference number: 4 (lower is better)
Translates to: YTDTHRNPLKTLEVLSSHSGLGK*THQHHL
Trigger: AAGGTGGTGCTGGTGGGTTCACTTTCCAAGGCCAGA...ATGTGAACTCAACACTTCCAGAGTCTTTAAAGGGTTTCTATGTGTATCAGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTCTGGCCTTGGAAAGTaGACCCACCAGCACCACCTT +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPASGLGK*THQHHL
Trigger: AAGGTGGTGCTGGTGGGTTCACTTTCCAAGGCCAGA...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTCCTGGTCTCGAGTTTTaGAGGAGTTTCCCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAPGLEF*RSFPAP
Trigger: TGGGGCTGGGAAACTCCTGCAAAACTCGAGACCAGG...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
ENST00000416865.6
CDS-3UTR GCA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCTCCCTCCCTGGGAGGTaGCTCCCTTTCATCTTTGTC +
Preference number: 4 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSSLPGR*LPFIFV
Trigger: GACAAAGATGAAAGGGAGGCACCTCCCAGGGAGGGA...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp TACACTGATACACATAGAAACCCTTTAAAGACTCTGGAAGTGTTGAGTTCACATTCCCTCCCTGGGAGGTaGCTCCCTTTCATCTTTGTC +
Preference number: 4 (lower is better)
Translates to: YTDTHRNPLKTLEVLSSHSLPGR*LPFIFV
Trigger: GACAAAGATGAAAGGGAGGCACCTCCCAGGGAGGGA...ATGTGAACTCAACACTTCCAGAGTCTTTAAAGGGTTTCTATGTGTATCAGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACCAAAGTGTCTTTGACTaGAGCACTGCTACTGTATTG +
Preference number: 4 (lower is better)
Translates to: IALPSVSGLKSRLTIALHQSVFD*STATVL
Trigger: CAATACAGTAGCAGTGCTGCAGTCAAAGACACTTTG...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGGGATTTTGTTTGGAGTaGCACAAAGTGTCTTTGACT +
Preference number: 4 (lower is better)
Translates to: PVETALYLNTFTHWQASRGFCLE*HKVSLT
Trigger: AGTCAAAGACACTTTGTGGCACTCCAAACAAAATCC...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGGGATCTAATAAAGAATaGTCAGAACCAACCCTTGCA +
Preference number: 4 (lower is better)
Translates to: PVETALYLNTFTHWQASRGSNKE*SEPTLA
Trigger: TGCAAGGGTTGGTTCTGAGCATTCTTTATTAGATCC...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTATCAAGGCTAACTATTaGCTTGCACACAGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVIKANY*LAHSSV
Trigger: GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGAT...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTCACTCAAGGCAAGACTaGCCTGGCTGCCATGCAGAT +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAHSRQD*PGCHAD
Trigger: ATCTGCATGGCAGCCAGGGCAGTCTTGCCTTGAGTG...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416865.6
CDS-3UTR CCA 90 bp AAGAATAAAGGGAACACCGAGACTTGTCTTAAAGAAGCTGTTTGTCATTCTTTTTGCGGGCTGGCTTCCTaGTCTCGAGTTTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: KNKGNTETCLKEAVCHSFCGLAS*SRVLQE
Trigger: CTCCTGCAAAACTCGAGACCAGGAAGCCAGCCCGCA...AAAAGAATGACAAACAGCTTCTTTAAGACAAGTCTCGGTGTTCCCTTTATTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR CCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTAGAGCGGATGTGGACTaGCCTCCCACAGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPARADVD*PPTEEE
Trigger: CTCTTCTTCTGTGGGAGGCCAGTCCACATCCGCTCT...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
CDS-3UTR CCA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTTCCAGTCTTTCCAGCTaGGTCAGTCTATTCATAGTT +
Preference number: 4 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVSSLSS*VSLFIV
Trigger: AACTATGAATAGACTGACCCAGCTGGAAAGACTGGA...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGGTAAGCACCATTTTCTaGGTCTCTGAATCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: PVETALYLNTFTHWQASRVSTIF*VSESVS
Trigger: AGAAACTGATTCAGAGACCCAGAAAATGGTGCTTAC...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAAAACATCCTCAGTCCTTaGCTGTTGAGGGAACATGTA +
Preference number: 4 (lower is better)
Translates to: KGIKAMREIALPSVSGLKNILSP*LLREHV
Trigger: TACATGTTCCCTCAACAGCCAAGGACTGAGGATGTT...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGACAATCACTGTCATGTaGTTCAGTCCTATTAGGAGA +
Preference number: 4 (lower is better)
Translates to: PVETALYLNTFTHWQASRTITVM*FSPIRR
Trigger: TCTCCTAATAGGACTGAACCACATGACAGTGATTGT...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTCACAACAGATCCAACTaGACCACTTTTCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: MREIALPSVSGLKSRLTIHNRSN*TTFLRG
Trigger: TCCCCTCAGAAAAGTGGTCCAGTTGGATCTGTTGTG...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCACAACAGATCCAACTaGACCACTTTTCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRHNRSN*TTFLRG
Trigger: TCCCCTCAGAAAAGTGGTCCAGTTGGATCTGTTGTG...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACTTTAACGGTTGTACTTaGCTGCTGAGGTCCATTATC +
Preference number: 4 (lower is better)
Translates to: IALPSVSGLKSRLTIALHFNGCT*LLRSII
Trigger: GATAATGGACCTCAGCAGCCAAGTACAACCGTTAAA...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACATTGTGGGCCACTTGTaGGGCCTCTTATTATATTTG +
Preference number: 4 (lower is better)
Translates to: IALPSVSGLKSRLTIALHIVGHL*GLLLYL
Trigger: CAAATATAATAAGAGGCCCCACAAGTGGCCCACAAT...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AAATCAGTGGATTTCCATAACACAGAAAATGCATGGACATGCATCTACAGTAGATTGAGGTGCAGATTGTaGGCCACTTGTGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: KSVDFHNTENAWTCIYSRLRCRL*ATCGAS
Trigger: AGAGGCCCCACAAGTGGCCCACAATCTGCACCTCAA...TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATGGAAATCCACTGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGGCACTGCTACTGTATTaGATATTATACTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: PVETALYLNTFTHWQASRALLLY*ILYCGG
Trigger: TCCTCCACAGTATAATATCCAATACAGTAGCAGTGC...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGTTTGGGGATTTTGTTTaGAGTGCCACAAAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: PVETALYLNTFTHWQASRFGDFV*SATKCL
Trigger: AAGACACTTTGTGGCACTCCAAACAAAATCCCCAAA...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAACTGGCATGGTCTATTTaGGGATTTTGTTTGGAGTGC +
Preference number: 4 (lower is better)
Translates to: KGIKAMREIALPSVSGLKLAWSI*GFCLEC
Trigger: GCACTCCAAACAAAATCCCCAAATAGACCATGCCAG...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCGATTTACAGAGGCTGTaGAGGACACACTACTTTGTC +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVDLQRL*RTHYFV
Trigger: GACAAAGTAGTGTGTCCTCCACAGCCTCTGTAAATC...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTGTTCTTCCCGCTGAGTaGAACTCTCTGTATGATAAA +
Preference number: 4 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVVLPAE*NSLYDK
Trigger: TTTATCATACAGAGAGTTCCACTCAGCGGGAAGAAC...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTGTGTATATGGAGGCTaGTGGGCCACTTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTCVYGG*WATFSI
Trigger: GATGCTGAAAGTGGCCCACCAGCCTCCATATACACA...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380943.6
CDS-3UTR CCA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTTGTCTAGGAGAACAATaGGGCTGTGTATATGGAGGC +
Preference number: 4 (lower is better)
Translates to: MREIALPSVSGLKSRLTICLGEQ*GCVYGG
Trigger: GCCTCCATATACACAGCCCCATTGTTCTCCTAGACA...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380938.6
ENST00000380943.6
CDS-3UTR CCA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACGCTAAATCCAAGTTCTaGATCCTTTTCAACCCTCAC +
Preference number: 4 (lower is better)
Translates to: IALPSVSGLKSRLTIALHAKSKF*ILFNPH
Trigger: GTGAGGGTTGAAAAGGATCCAGAACTTGGATTTAGC...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCTCTGCCATCTGTCTCTaGGCTAAAATCAAGGCTAAC +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVSAICL*AKIKAN
Trigger: GTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGA...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCTGCCATCTGTCTCTaGGCTAAAATCAAGGCTAAC +
Preference number: 4 (lower is better)
Translates to: KGIKAMREIALPSVSGLKSAICL*AKIKAN
Trigger: GTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGA...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTTCACAAAGCTTGCTTTaGTTTCCTAGCTCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVSQSLL*FPSSKC
Trigger: ACACTTGGAGCTAGGAAACCAAAGCAAGCTTTGTGA...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTAAGGCAAGACTGCCCTaGCTGCCATGCAGATCCCTA +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFKARLP*LPCRSL
Trigger: TAGGGATCTGCATGGCAGCCAGGGCAGTCTTGCCTT...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416865.6
CDS-3UTR TCA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGTTAGGTTTAACAGCTaGGAAAATCCATCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: MREIALPSVSGLKSRLTIVRFNS*ENPSGS
Trigger: GCTCCCTGATGGATTTTCTCAGCTGTTAAACCTAAC...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGGTTAGGTTTAACAGCTaGGAAAATCCATCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRVRFNS*ENPSGS
Trigger: GCTCCCTGATGGATTTTCTCAGCTGTTAAACCTAAC...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTCTTCAGGCACTTCCGTaGATTCGTTACTTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: MREIALPSVSGLKSRLTILQALP*IRYFPN
Trigger: ATTTGGGAAGTAACGAATTCACGGAAGTGCCTGAAG...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGGATAATAGGAGGTCTTaGAGGTTTTCACATGTTGAA +
Preference number: 4 (lower is better)
Translates to: PVETALYLNTFTHWQASRDNRRS*RFSHVE
Trigger: TTCAACATGTGAAAACCTTCAAGACCTCCTATTATC...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTAAGCTGCCCAATAGATaGAGGCAAAGCTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: MREIALPSVSGLKSRLTIKLPNR*RQSFNF
Trigger: GAAGTTGAAGCTTTGCCTTCATCTATTGGGCAGCTT...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGAAGCTGCCCAATAGATaGAGGCAAAGCTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRKLPNR*RQSFNF
Trigger: GAAGTTGAAGCTTTGCCTTCATCTATTGGGCAGCTT...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATTTGGACTGATTATCTaGGAGCCACATAGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: KGIKAMREIALPSVSGLKFGLII*EPHSCQ
Trigger: TTGACAGCTATGTGGCTCTCAGATAATCAGTCCAAA...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTGAATCAGTTTCTTTTTaGAGAGGTATCAGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVESVSF*RGIRGL
Trigger: CAAACCCCTGATACCTCTTCAAAAAGAAACTGATTC...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTAGTATTAAGAGAAACTaGATCAGACATCCGAGATGG +
Preference number: 4 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVSIKRN*IRHPRW
Trigger: CCATCTCGGATGTCTGATTCAGTTTCTCTTAATACT...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGTTGTACTTGGCTGCTaGGGTCCATTATCACTAAGA +
Preference number: 4 (lower is better)
Translates to: MREIALPSVSGLKSRLTIVVLGC*GPLSLR
Trigger: TCTTAGTGATAATGGACCTCAGCAGCCAAGTACAAC...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTCAAATCTCTTTCTCCTTCAGGAATCTaGGCCCGCCTTGTAGAGCCT +
Preference number: 4 (lower is better)
Translates to: THSSIQYAHSKSQHFKSLSPSGI*ARLVEP
Trigger: AGGCTCTACAAGGCGGGCTCAGATTCCTGAAGGAGA...AAGAGATTTGAAGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp AAATCAGTGGATTTCCATAACACAGAAAATGCATGGACATGCATCTACAGTAGAGAGGGTCGAGCACTCTaGGGTCTTGATGCATTTGGA +
Preference number: 4 (lower is better)
Translates to: KSVDFHNTENAWTCIYSREGRAL*GLDAFG
Trigger: TCCAAATGCATCAAGACCTCAGAGTGCTCGACCCTC...TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATGGAAATCCACTGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTGAGGGTCGAGCACTCTaGGGTCTTGATGCATTTGGA +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAEGRAL*GLDAFG
Trigger: TCCAAATGCATCAAGACCTCAGAGTGCTCGACCCTC...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACTGTACGTTATAGCTaGCCACAGATTCTAATCTTG +
Preference number: 4 (lower is better)
Translates to: IALPSVSGLKSRLTIALHTVRYS*PQILIL
Trigger: CAAGATTAGAATCTGTGGTCAGCTATAACGTACAGT...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR TCA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCAGATGGGCAGATGCGTaGCAGATCACCATTGTCCCT +
Preference number: 4 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSRWADA*QITIVP
Trigger: AGGGACAATGGTGATCTGTCACGCATCTGCCCATCT...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR GCA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTGCTGCTGAAGTGAATTaGTTGATAATAGGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVAAEVN*LIIGGL
Trigger: AAGACCTCCTATTATCAAGCAATTCACTTCAGCAGC...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACGCTGCTGAAGTGAATTaGTTGATAATAGGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: IALPSVSGLKSRLTIALHAAEVN*LIIGGL
Trigger: AAGACCTCCTATTATCAAGCAATTCACTTCAGCAGC...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACTTCATCACATTCAAATaGAACTTGAGCCCGCTGTTT +
Preference number: 4 (lower is better)
Translates to: IALPSVSGLKSRLTIALHFITFK*NLSPLF
Trigger: AAACAGCGGGCTCAAGTTGCATTTGAATGTGATGAA...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp AAGAATAAAGGGAACACCGAGACTTGTCTTAAAGAAGCTGTTTGTCATTCTTTTTCCCTCCCTGGGAGGTaGCTCCCTTTCATCTTTGTC +
Preference number: 4 (lower is better)
Translates to: KNKGNTETCLKEAVCHSFSLPGR*LPFIFV
Trigger: GACAAAGATGAAAGGGAGGCACCTCCCAGGGAGGGA...AAAAGAATGACAAACAGCTTCTTTAAGACAAGTCTCGGTGTTCCCTTTATTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR GCA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACGGGAGAGATCTTCAGTaGTTTTGGAAATACCTAAGT +
Preference number: 4 (lower is better)
Translates to: IALPSVSGLKSRLTIALHGRDLQ*FWKYLS
Trigger: ACTTAGGTATTTCCAAAAGCACTGAAGATCTCTCCC...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACGGATTTTGTTTGGAGTaGCACAAAGTGTCTTTGACT +
Preference number: 4 (lower is better)
Translates to: IALPSVSGLKSRLTIALHGFCLE*HKVSLT
Trigger: AGTCAAAGACACTTTGTGGCACTCCAAACAAAATCC...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATGTACTTCGAGTTACTaGAGGAATAAGTCGGTCGTT +
Preference number: 4 (lower is better)
Translates to: KGIKAMREIALPSVSGLKCTSSY*RNKSVV
Trigger: AACGACCGACTTATTCCTGCAGTAACTCGAAGTACA...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AAGAATAAAGGGAACACCGAGACTTGTCTTAAAGAAGCTGTTTGTCATTCTTTTAGAGCGGATGTGGACTaGCCTCCCACAGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: KNKGNTETCLKEAVCHSFRADVD*PPTEEE
Trigger: CTCTTCTTCTGTGGGAGGCCAGTCCACATCCGCTCT...AAAAGAATGACAAACAGCTTCTTTAAGACAAGTCTCGGTGTTCCCTTTATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR CCA 90 bp ACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTCAAATCTCTTAGAGCGGATGTGGACTaGCCTCCCACAGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: THSSIQYAHSKSQHFKSLRADVD*PPTEEE
Trigger: CTCTTCTTCTGTGGGAGGCCAGTCCACATCCGCTCT...AAGAGATTTGAAGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCTCCAGTCTTTCCAGCTaGGTCAGTCTATTCATAGTT +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVSSLSS*VSLFIV
Trigger: AACTATGAATAGACTGACCCAGCTGGAAAGACTGGA...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCCAGTCTTTCCAGCTaGGTCAGTCTATTCATAGTT +
Preference number: 4 (lower is better)
Translates to: KGIKAMREIALPSVSGLKSSLSS*VSLFIV
Trigger: AACTATGAATAGACTGACCCAGCTGGAAAGACTGGA...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTGTAAGCACCATTTTCTaGGTCTCTGAATCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVVSTIF*VSESVS
Trigger: AGAAACTGATTCAGAGACCCAGAAAATGGTGCTTAC...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGAACATCCTCAGTCCTTaGCTGTTGAGGGAACATGTA +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRNILSP*LLREHV
Trigger: TACATGTTCCCTCAACAGCCAAGGACTGAGGATGTT...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTAAGTGCTACGACTTTTaGCTGGTTAATAGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVKCYDF*LVNRGF
Trigger: GAAACCTCTATTAACCAGCCAAAAGTCGTAGCACTT...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACATCAGACATCCGAGATaGAGAAGAACAATTGCTGTT +
Preference number: 4 (lower is better)
Translates to: IALPSVSGLKSRLTIALHIRHPR*RRTIAV
Trigger: AACAGCAATTGTTCTTCTCCATCTCGGATGTCTGAT...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTATCAGACATCCGAGATaGAGAAGAACAATTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVIRHPR*RRTIAV
Trigger: AACAGCAATTGTTCTTCTCCATCTCGGATGTCTGAT...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAATCACTGTCATGTaGTTCAGTCCTATTAGGAGA +
Preference number: 4 (lower is better)
Translates to: IALPSVSGLKSRLTIALHTITVM*FSPIRR
Trigger: TCTCCTAATAGGACTGAACCACATGACAGTGATTGT...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATTGTGGGCCACTTGTaGGGCCTCTTATTATATTTG +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVIVGHL*GLLLYL
Trigger: CAAATATAATAAGAGGCCCCACAAGTGGCCCACAAT...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTCAAATCTCTTTTGAGGTGCAGATTGTaGGCCACTTGTGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: THSSIQYAHSKSQHFKSLLRCRL*ATCGAS
Trigger: AGAGGCCCCACAAGTGGCCCACAATCTGCACCTCAA...AAGAGATTTGAAGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTGCACTGCTACTGTATTaGATATTATACTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVALLLY*ILYCGG
Trigger: TCCTCCACAGTATAATATCCAATACAGTAGCAGTGC...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACGCACTGCTACTGTATTaGATATTATACTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: IALPSVSGLKSRLTIALHALLLY*ILYCGG
Trigger: TCCTCCACAGTATAATATCCAATACAGTAGCAGTGC...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTGGCATGGTCTATTTaGGGATTTTGTTTGGAGTGC +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRLAWSI*GFCLEC
Trigger: GCACTCCAAACAAAATCCCCAAATAGACCATGCCAG...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp CTTCCAAATAGATTTCACACGTCAATCTCCATCAGAGAAACATTTCCCATCTTAGGTCGTTTGGTGAGATaGCCCACATTTCCCCATGTC +
Preference number: 4 (lower is better)
Translates to: LPNRFHTSISIRETFPILGRLVR*PTFPHV
Trigger: GACATGGGGAAATGTGGGCCATCTCACCAAACGACC...TAAGATGGGAAATGTTTCTCTGATGGAGATTGACGTGTGAAATCTATTTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR CCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTGGTCGTTTGGTGAGATaGCCCACATTTCCCCATGTC +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFGRLVR*PTFPHV
Trigger: GACATGGGGAAATGTGGGCCATCTCACCAAACGACC...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACACTACTTTGTCGCTaGATTGTACTTCGAGTTACT +
Preference number: 4 (lower is better)
Translates to: IALPSVSGLKSRLTIALHTLLCR*IVLRVT
Trigger: AGTAACTCGAAGTACAATCCAGCGACAAAGTAGTGT...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGGATTTACAGAGGCTGTaGAGGACACACTACTTTGTC +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRDLQRL*RTHYFV
Trigger: GACAAAGTAGTGTGTCCTCCACAGCCTCTGTAAATC...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTAAGGATCTCCTGAACTaGATGTCTGGGGATGCTTCT +
Preference number: 4 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTKDLLN*MSGDAS
Trigger: AGAAGCATCCCCAGACATCCAGTTCAGGAGATCCTT...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR CCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTATGGGGCTGTGTATATaGAGGCTGGTGGGCCACTTT +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFMGLCI*RLVGHF
Trigger: AAAGTGGCCCACCAGCCTCCATATACACAGCCCCAT...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000284037.10
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
CDS-3UTR CCA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTGTCTAGGAGAACAATaGGGCTGTGTATATGGAGGC +
Preference number: 4 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTCLGEQ*GCVYGG
Trigger: GCCTCCATATACACAGCCCCATTGTTCTCCTAGACA...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380943.6
CDS-3UTR CCA 90 bp ACCCTTCCAAATAGATTTCACACGTCAATCTCCATCAGAGAAACATTTCCCATCGTTTTAGTCTGGCCTTaGAAAGTGAACCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: TLPNRFHTSISIRETFPIVLVWP*KVNPPA
Trigger: TGCTGGTGGGTTCACTTTCCAAGGCCAGACTAAAAC...GATGGGAAATGTTTCTCTGATGGAGATTGACGTGTGAAATCTATTTGGAAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR CCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCTCACAAAGCTTGCTTTaGTTTCCTAGCTCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVSQSLL*FPSSKC
Trigger: ACACTTGGAGCTAGGAAACCAAAGCAAGCTTTGTGA...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
3UTR CAA 72 bp GAGAAGCTAGATGGGCAGATGCGTGACAGATCACCATaGTCCCTGGTTGTTACATTAGAAAAGAAAGTTGTA +
Preference number: 4 (lower is better)
Translates to: EKLDGQMRDRSP*SLVVTLEKKVV
Trigger: TACAACTTTCTTTTCTAATGTAACAACCAGGGACAATGGTGATCTGTCACGCATCTGCCCATCTAGCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR TCA 90 bp AAATCAGTGGATTTCCATAACACAGAAAATGCATGGACATGCATCTACAGTAGACACTTTGGATCCAGCTaGATATCTCTCTCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: KSVDFHNTENAWTCIYSRHFGSS*ISLSGE
Trigger: CTCACCCGAGAGAGATATTCAGCTGGATCCAAAGTG...TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATGGAAATCCACTGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCTTAGACACACTGGGTTaGATTTATCTCCCTGATGTT +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVLDTLG*IYLPDV
Trigger: AACATCAGGGAGATAAATTCAACCCAGTGTGTCTAA...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTGTTAGGTTTAACAGCTaGGAAAATCCATCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTVRFNS*ENPSGS
Trigger: GCTCCCTGATGGATTTTCTCAGCTGTTAAACCTAAC...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACGATAATAGGAGGTCTTaGAGGTTTTCACATGTTGAA +
Preference number: 4 (lower is better)
Translates to: IALPSVSGLKSRLTIALHDNRRS*RFSHVE
Trigger: TTCAACATGTGAAAACCTTCAAGACCTCCTATTATC...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTTTTGGACTGATTATCTaGGAGCCACATAGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: MREIALPSVSGLKSRLTIFGLII*EPHSCQ
Trigger: TTGACAGCTATGTGGCTCTCAGATAATCAGTCCAAA...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCGAATCAGTTTCTTTTTaGAGAGGTATCAGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVESVSF*RGIRGL
Trigger: CAAACCCCTGATACCTCTTCAAAAAGAAACTGATTC...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCAGTATTAAGAGAAACTaGATCAGACATCCGAGATGG +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVSIKRN*IRHPRW
Trigger: CCATCTCGGATGTCTGATTCAGTTTCTCTTAATACT...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCCAGAGTGAGGTGTCTTaGCTACTATCAGTATTAAGA +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVQSEVS*LLSVLR
Trigger: TCTTAATACTGATAGTAGTCAAGACACCTCACTCTG...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTCACTGGAGAGCAGAGTaGGGTGTCTTGACTACTATC +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAHWRAE*GVLTTI
Trigger: GATAGTAGTCAAGACACCTCACTCTGCTCTCCAGTG...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp AAATCAGTGGATTTCCATAACACAGAAAATGCATGGACATGCATCTACAGTAGACACTGGAGAGCAGAGTaGGGTGTCTTGACTACTATC +
Preference number: 4 (lower is better)
Translates to: KSVDFHNTENAWTCIYSRHWRAE*GVLTTI
Trigger: GATAGTAGTCAAGACACCTCACTCTGCTCTCCAGTG...TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATGGAAATCCACTGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTACTGGACCACTTTTCTaGGGGGAGAGATCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFTGPLF*GERSSV
Trigger: CACTGAAGATCTCTCCCCTCAGAAAAGTGGTCCAGT...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTACTGGACCACTTTTCTaGGGGGAGAGATCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPATGPLF*GERSSV
Trigger: CACTGAAGATCTCTCCCCTCAGAAAAGTGGTCCAGT...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGAATACCTGCAATGGTTaGTCATACAACAGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRNTCNG*SYNSVA
Trigger: TGCCACACTGTTGTATGATCAACCATTGCAGGTATT...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCGGAGGACCATATATTTaGGGTGCAGATTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSGGPYI*GADCGP
Trigger: TGGCCCACAATCTGCACCTCAAATATATGGTCCTCC...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp CTTCCAAATAGATTTCACACGTCAATCTCCATCAGAGAAACATTTCCCATCTTAGCCACAAAGTGTCTTTaGCTGCAGCACTGCTACTGT +
Preference number: 4 (lower is better)
Translates to: LPNRFHTSISIRETFPILATKCL*LQHCYC
Trigger: ACAGTAGCAGTGCTGCAGTCAAAGACACTTTGTGGC...TAAGATGGGAAATGTTTCTCTGATGGAGATTGACGTGTGAAATCTATTTGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR TCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTGCCACAAAGTGTCTTTaGCTGCAGCACTGCTACTGT +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAATKCL*LQHCYC
Trigger: ACAGTAGCAGTGCTGCAGTCAAAGACACTTTGTGGC...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTAGCACTCTGAGGTCTTaGTGCATTTGGACCATCTAT +
Preference number: 4 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTSTLRS*CIWTIY
Trigger: ATAGATGGTCCAAATGCATCAAGACCTCAGAGTGCT...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp CATAACACAGAAAATGCATGGACATGCATCTACAGTAGAGTTAAAAATTTCCTGGAGGGTCGAGCACTCTaGGGTCTTGATGCATTTGGA +
Preference number: 4 (lower is better)
Translates to: HNTENAWTCIYSRVKNFLEGRAL*GLDAFG
Trigger: TCCAAATGCATCAAGACCTCAGAGTGCTCGACCCTC...CAGGAAATTTTTAACTCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp TACACTGATACACATAGAAACCCTTTAAAGACTCTGGAAGTGTTGAGTTCACATACCCCCGACACCACCTaGTATGCTAAATCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: YTDTHRNPLKTLEVLSSHTPDTT*YAKSKF
Trigger: GAACTTGGATTTAGCATATCAGGTGGTGTCGGGGGT...ATGTGAACTCAACACTTCCAGAGTCTTTAAAGGGTTTCTATGTGTATCAGTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTACCCCCGACACCACCTaGTATGCTAAATCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFTPDTT*YAKSKF
Trigger: GAACTTGGATTTAGCATATCAGGTGGTGTCGGGGGT...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR TCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTCATCATCATCAGGTCTaGATGGGTTTCCTCTACCCC +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAHHHQV*MGFLYP
Trigger: GGGGTAGAGGAAACCCATTCAGACCTGATGATGATG...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTAGCAAGAATGGAAAGTaGGTCCAACTCACTTTTGCA +
Preference number: 4 (lower is better)
Translates to: MREIALPSVSGLKSRLTISKNGK*VQLTFA
Trigger: TGCAAAAGTGAGTTGGACTCACTTTCCATTCTTGCT...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGAGATCCATTGTTCCGTaGGGCTTAATTCCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRRSIVP*GLIPFP
Trigger: TGGAAAAGGAATTAAGCCTCACGGAACAATGGATCT...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR TCA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCTCAAATTTTATCCTaGAATAAAACCGTGGGCCGA +
Preference number: 4 (lower is better)
Translates to: KGIKAMREIALPSVSGLKSQILS*NKTVGR
Trigger: TCGGCCCACGGTTTTATTTCAGGATAAAATTTGAGA...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR GCA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGGAACTTGTTCTAAGCTaGAATGAGAATAATCAAGAG +
Preference number: 4 (lower is better)
Translates to: PVETALYLNTFTHWQASRELVLS*NENNQE
Trigger: CTCTTGATTATTCTCATTGCAGCTTAGAACAAGTTC...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATTCAATCCACTTAGTTaGTCAAGTACTTCAGGCACT +
Preference number: 4 (lower is better)
Translates to: KGIKAMREIALPSVSGLKFNPLS*SSTSGT
Trigger: AGTGCCTGAAGTACTTGAGCAACTAAGTGGATTGAA...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCGCTGCTGAAGTGAATTaGTTGATAATAGGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVAAEVN*LIIGGL
Trigger: AAGACCTCCTATTATCAAGCAATTCACTTCAGCAGC...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCTTAAGTTAGTAAGCTaGCCAATAGATGAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVLKLVS*PIDEGK
Trigger: TTTGCCTTCATCTATTGGGCAGCTTACTAACTTAAG...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTTCATGGTTAACAATATaGTTCAAGTTCTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVSWLTI*FKFSEA
Trigger: AGCCTCTGAGAACTTGAAGCATATTGTTAACCATGA...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCAAAGTGTCTTTGACTaGAGCACTGCTACTGTATTG +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRQSVFD*STATVL
Trigger: CAATACAGTAGCAGTGCTGCAGTCAAAGACACTTTG...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAACATTTGGACCATCTATaGTGTATGTTCGTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: KGIKAMREIALPSVSGLKHLDHL*CMFVQK
Trigger: TTTCTGCACGAACATACAGCATAGATGGTCCAAATG...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGATCAAGGCTAACTATTaGCTTGCACACAGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRIKANY*LAHSSV
Trigger: GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGAT...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACCCCATCCCCATTCTTTaGTTCCAGATTTTTATAGAA +
Preference number: 4 (lower is better)
Translates to: IALPSVSGLKSRLTIALHPIPIL*FQIFIE
Trigger: TTCTATAAAAATCTGGAAGCAAAGAATGGGGATGGG...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGGACAAGAACAGATCCTaGCGAGCTCATAAATGCAAT +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRDKNRS*RAHKCN
Trigger: ATTGCATTTATGAGCTCGGCAGGATCTGTTCTTGTC...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCAGTTTCACAAAGCTTaGTTTGGTTTCCTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRQFHKA*FGFLAP
Trigger: TGGAGCTAGGAAACCAAAGCAAGCTTTGTGAAACTG...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGGCAATAACCAAATATTaGTCTAATGAAAGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: PVETALYLNTFTHWQASRAITKY*SNERFQ
Trigger: CTGGAACCTTTCATTAGAGCAATATTTGGTTATTGC...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTATCACCCATTTCCTCTaGAAGTGTCTCAAGTTTATT +
Preference number: 4 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVITHFL*KCLKFI
Trigger: AATAAACTTGAGACACTTCCAGAGGAAATGGGTGAT...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACATTCTTAAGCTCATCTaGGTATGGTGTTGGATATCT +
Preference number: 4 (lower is better)
Translates to: IALPSVSGLKSRLTIALHILKLI*VWCWIS
Trigger: AGATATCCAACACCATACCCAGATGAGCTTAAGAAT...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTGCTACGACTTTTGGCTaGTTAATAGAGGTTTCAATT +
Preference number: 4 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVATTFG*LIEVSI
Trigger: AATTGAAACCTCTATTAACCAGCCAAAAGTCGTAGC...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCAAGTGCTACGACTTTTaGCTGGTTAATAGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVKCYDF*LVNRGF
Trigger: GAAACCTCTATTAACCAGCCAAAAGTCGTAGCACTT...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAAACAATCACTGTCATGTaGTTCAGTCCTATTAGGAGA +
Preference number: 4 (lower is better)
Translates to: KGIKAMREIALPSVSGLKTITVM*FSPIRR
Trigger: TCTCCTAATAGGACTGAACCACATGACAGTGATTGT...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCACAATCACTGTCATGTaGTTCAGTCCTATTAGGAGA +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVTITVM*FSPIRR
Trigger: TCTCCTAATAGGACTGAACCACATGACAGTGATTGT...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGTTTAACGGTTGTACTTaGCTGCTGAGGTCCATTATC +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRFNGCT*LLRSII
Trigger: GATAATGGACCTCAGCAGCCAAGTACAACCGTTAAA...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGATTGTGGGCCACTTGTaGGGCCTCTTATTATATTTG +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRIVGHL*GLLLYL
Trigger: CAAATATAATAAGAGGCCCCACAAGTGGCCCACAAT...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCTTTGGGGATTTTGTTTaGAGTGCCACAAAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVFGDFV*SATKCL
Trigger: AAGACACTTTGTGGCACTCCAAACAAAATCCCCAAA...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCACACTACTTTGTCGCTaGATTGTACTTCGAGTTACT +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVTLLCR*IVLRVT
Trigger: AGTAACTCGAAGTACAATCCAGCGACAAAGTAGTGT...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGGTTCTTCCCGCTGAGTaGAACTCTCTGTATGATAAA +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRVLPAE*NSLYDK
Trigger: TTTATCATACAGAGAGTTCCACTCAGCGGGAAGAAC...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTGTATATGGAGGCTGGTaGGCCACTTTCAGCATCAAG +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAVYGGW*ATFSIK
Trigger: CTTGATGCTGAAAGTGGCCCACCAGCCTCCATATAC...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284037.10
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
CDS-3UTR CCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTTGTGTATATGGAGGCTaGTGGGCCACTTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFCVYGG*WATFSI
Trigger: GATGCTGAAAGTGGCCCACCAGCCTCCATATACACA...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000284037.10
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
CDS-3UTR CCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGGCTAAATCCAAGTTCTaGATCCTTTTCAACCCTCAC +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRAKSKF*ILFNPH
Trigger: GTGAGGGTTGAAAAGGATCCAGAACTTGGATTTAGC...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCTAAATCCAAGTTCTaGATCCTTTTCAACCCTCAC +
Preference number: 4 (lower is better)
Translates to: MREIALPSVSGLKSRLTIAKSKF*ILFNPH
Trigger: GTGAGGGTTGAAAAGGATCCAGAACTTGGATTTAGC...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTATCATCAGGTCTGAATaGGTTTCCTCTACCCCCGAC +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAIIRSE*VSSTPD
Trigger: GTCGGGGGTAGAGGAAACCCATTCAGACCTGATGAT...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGAGCTTCTCAGGTGGTTaGATATTAGGACTGTACGTT +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRSFSGG*ILGLYV
Trigger: AACGTACAGTCCTAATATCCAACCACCTGAGAAGCT...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR TCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTAGGCTTCGCTTGACATaGTTTCCTTCCCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFRLRLT*FPSLHQ
Trigger: CTGATGAAGGGAAGGAAATCATGTCAAGCGAAGCCT...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
CDS-3UTR TCA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTTTAGACACACTGGGTTaGATTTATCTCCCTGATGTT +
Preference number: 4 (lower is better)
Translates to: MREIALPSVSGLKSRLTILDTLG*IYLPDV
Trigger: AACATCAGGGAGATAAATTCAACCCAGTGTGTCTAA...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAAGATAATAGGAGGTCTTaGAGGTTTTCACATGTTGAA +
Preference number: 4 (lower is better)
Translates to: KGIKAMREIALPSVSGLKDNRRS*RFSHVE
Trigger: TTCAACATGTGAAAACCTTCAAGACCTCCTATTATC...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTGTCTCAGGAAGCTGCTaGAGTGAATTGCTTGATAAT +
Preference number: 4 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTVSGSC*SELLDN
Trigger: ATTATCAAGCAATTCACTTCAGCAGCTTCCTGAGAC...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTCATTCAAATGCAACTTaGGCCCGCTGTTTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAHSNAT*ARCFLC
Trigger: ACAGAGGAAACAGCGGGCTCAAGTTGCATTTGAATG...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCCATTCAAATGCAACTTaGGCCCGCTGTTTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSHSNAT*ARCFLC
Trigger: ACAGAGGAAACAGCGGGCTCAAGTTGCATTTGAATG...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCAGAGTGAGGTGTCTTaGCTACTATCAGTATTAAGA +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRQSEVS*LLSVLR
Trigger: TCTTAATACTGATAGTAGTCAAGACACCTCACTCTG...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCAATATCCTGTGTTTTTaGTCTTTCCATGATCTCTGG +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVNILCF*SFHDLW
Trigger: CCAGAGATCATGGAAAGATCAAAAACACAGGATATT...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp GAAAGTTGTAACAGAAGGATTCTTTTTGTCAGCCTCTCTCCTAAAGATTCTATAGGAGGACCATATATTTaGGGTGCAGATTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: ESCNRRILFVSLSPKDSIGGPYI*GADCGP
Trigger: TGGCCCACAATCTGCACCTCAAATATATGGTCCTCC...TATAGAATCTTTAGGAGAGAGGCTGACAAAAAGAATCCTTCTGTTACAACTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR TCA 90 bp CATAACACAGAAAATGCATGGACATGCATCTACAGTAGAGTTAAAAATTTCCTGGGAGGACCATATATTTaGGGTGCAGATTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: HNTENAWTCIYSRVKNFLGGPYI*GADCGP
Trigger: TGGCCCACAATCTGCACCTCAAATATATGGTCCTCC...CAGGAAATTTTTAACTCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp ACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTCAAATCTCTTGGAGGACCATATATTTaGGGTGCAGATTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: THSSIQYAHSKSQHFKSLGGPYI*GADCGP
Trigger: TGGCCCACAATCTGCACCTCAAATATATGGTCCTCC...AAGAGATTTGAAGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp AAATCAGTGGATTTCCATAACACAGAAAATGCATGGACATGCATCTACAGTAGAATTTTCTGTGCTCTCTaGTCTAGGAAGGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: KSVDFHNTENAWTCIYSRIFCAL*SRKELR
Trigger: CCTCAGCTCCTTCCTAGATCAGAGAGCACAGAAAAT...TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATGGAAATCCACTGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp GGTTTGCTGAAGATCCATTGTTCCGTGAGGCTTAATTCCTTTTCCAAAATTATAATTTTCTGTGCTCTCTaGTCTAGGAAGGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GLLKIHCSVRLNSFSKIIIFCAL*SRKELR
Trigger: CCTCAGCTCCTTCCTAGATCAGAGAGCACAGAAAAT...TATAATTTTGGAAAAGGAATTAAGCCTCACGGAACAATGGATCTTCAGCAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR TCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTATTTTCTGTGCTCTCTaGTCTAGGAAGGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAIFCAL*SRKELR
Trigger: CCTCAGCTCCTTCCTAGATCAGAGAGCACAGAAAAT...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCGCTGGGCCAAGTCTCTaGTGTAAATGGTATGCAGTA +
Preference number: 4 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSAGPSL*CKWYAV
Trigger: TACTGCATACCATTTACATCAGAGACTTGGCCCAGC...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp AAGAATAAAGGGAACACCGAGACTTGTCTTAAAGAAGCTGTTTGTCATTCTTTTTTGACAAGGATCTCCTaGACTGGATGTCTGGGGATG +
Preference number: 4 (lower is better)
Translates to: KNKGNTETCLKEAVCHSFLTRIS*TGCLGM
Trigger: CATCCCCAGACATCCAGTTCAGGAGATCCTTGTCAA...AAAAGAATGACAAACAGCTTCTTTAAGACAAGTCTCGGTGTTCCCTTTATTCTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR TCA 90 bp ACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTCAAATCTCTTACCCCCGACACCACCTaGTATGCTAAATCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: THSSIQYAHSKSQHFKSLTPDTT*YAKSKF
Trigger: GAACTTGGATTTAGCATATCAGGTGGTGTCGGGGGT...AAGAGATTTGAAGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp CATAACACAGAAAATGCATGGACATGCATCTACAGTAGAGTTAAAAATTTCCTGCATCATCATCAGGTCTaGATGGGTTTCCTCTACCCC +
Preference number: 4 (lower is better)
Translates to: HNTENAWTCIYSRVKNFLHHHQV*MGFLYP
Trigger: GGGGTAGAGGAAACCCATTCAGACCTGATGATGATG...CAGGAAATTTTTAACTCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCCTTAAGTTAGTAAGCTaGCCAATAGATGAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVLKLVS*PIDEGK
Trigger: TTTGCCTTCATCTATTGGGCAGCTTACTAACTTAAG...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAACTTAAGTTAGTAAGCTaGCCAATAGATGAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: KGIKAMREIALPSVSGLKLKLVS*PIDEGK
Trigger: TTTGCCTTCATCTATTGGGCAGCTTACTAACTTAAG...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGTTCATCACATTCAAATaGAACTTGAGCCCGCTGTTT +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRFITFK*NLSPLF
Trigger: AAACAGCGGGCTCAAGTTGCATTTGAATGTGATGAA...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCTCATGGTTAACAATATaGTTCAAGTTCTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVSWLTI*FKFSEA
Trigger: AGCCTCTGAGAACTTGAAGCATATTGTTAACCATGA...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCATGGTTAACAATATaGTTCAAGTTCTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: KGIKAMREIALPSVSGLKSWLTI*FKFSEA
Trigger: AGCCTCTGAGAACTTGAAGCATATTGTTAACCATGA...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTTTTCCATTTTCCAAGTaGTCAGTTTCCTCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVFPFSK*SVSSLE
Trigger: TTCTAAAGAGGAAACTGAGCACTTGGAAAATGGAAA...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGGGAGAGATCTTCAGTaGTTTTGGAAATACCTAAGT +
Preference number: 4 (lower is better)
Translates to: MREIALPSVSGLKSRLTIGRDLQ*FWKYLS
Trigger: ACTTAGGTATTTCCAAAAGCACTGAAGATCTCTCCC...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTCAAAGTGTCTTTGACTaGAGCACTGCTACTGTATTG +
Preference number: 4 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTQSVFD*STATVL
Trigger: CAATACAGTAGCAGTGCTGCAGTCAAAGACACTTTG...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGGGATTTTGTTTGGAGTaGCACAAAGTGTCTTTGACT +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRGFCLE*HKVSLT
Trigger: AGTCAAAGACACTTTGTGGCACTCCAAACAAAATCC...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp AAGAATAAAGGGAACACCGAGACTTGTCTTAAAGAAGCTGTTTGTCATTCTTTTCATTTCCCCATGTCTTaGTGGGCCAAGTCTCTGATG +
Preference number: 4 (lower is better)
Translates to: KNKGNTETCLKEAVCHSFHFPMS*WAKSLM
Trigger: CATCAGAGACTTGGCCCAGCAAGACATGGGGAAATG...AAAAGAATGACAAACAGCTTCTTTAAGACAAGTCTCGGTGTTCCCTTTATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR GCA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGGATCTAATAAAGAATaGTCAGAACCAACCCTTGCA +
Preference number: 4 (lower is better)
Translates to: MREIALPSVSGLKSRLTIGSNKE*SEPTLA
Trigger: TGCAAGGGTTGGTTCTGAGCATTCTTTATTAGATCC...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGGGATCTAATAAAGAATaGTCAGAACCAACCCTTGCA +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRGSNKE*SEPTLA
Trigger: TGCAAGGGTTGGTTCTGAGCATTCTTTATTAGATCC...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAACCCATCCCCATTCTTTaGTTCCAGATTTTTATAGAA +
Preference number: 4 (lower is better)
Translates to: KGIKAMREIALPSVSGLKPIPIL*FQIFIE
Trigger: TTCTATAAAAATCTGGAAGCAAAGAATGGGGATGGG...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCACTTTACCAAGGCAATaGAAGGCCAAACAAAAATCA +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVTLPRQ*KAKQKS
Trigger: TGATTTTTGTTTGGCCTTGCATTGCCTTGGTAAAGT...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCAAGGACCCATCCCTTTaGTCTATAACTCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSKDPSL*SITLHS
Trigger: GCTGTGGAGAGTTATAGAGCAAAGGGATGGGTCCTT...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTAAGGACCCATCCCTTTaGTCTATAACTCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAKDPSL*SITLHS
Trigger: GCTGTGGAGAGTTATAGAGCAAAGGGATGGGTCCTT...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTGGCATTCGAAAAATGTaGCCACCAGAACCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFGIRKM*PPEPLL
Trigger: CAGAAGAGGTTCTGGTGGGCACATTTTTCGAATGCC...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000416865.6
CDS-3UTR CCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATCACCCATTTCCTCTaGAAGTGTCTCAAGTTTATT +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVITHFL*KCLKFI
Trigger: AATAAACTTGAGACACTTCCAGAGGAAATGGGTGAT...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGTAAGCACCATTTTCTaGGTCTCTGAATCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: MREIALPSVSGLKSRLTIVSTIF*VSESVS
Trigger: AGAAACTGATTCAGAGACCCAGAAAATGGTGCTTAC...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AAATCAGTGGATTTCCATAACACAGAAAATGCATGGACATGCATCTACAGTAGATTAAATTTCCCTCCCTaGGAGGTGCCTCCCTTTCAT +
Preference number: 4 (lower is better)
Translates to: KSVDFHNTENAWTCIYSRLNFPP*EVPPFH
Trigger: ATGAAAGGGAGGCACCTCCCAGGGAGGGAAATTTAA...TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATGGAAATCCACTGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCTTAAATTTCCCTCCCTaGGAGGTGCCTCCCTTTCAT +
Preference number: 4 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSLNFPP*EVPPFH
Trigger: ATGAAAGGGAGGCACCTCCCAGGGAGGGAAATTTAA...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAAATTCTTAAGCTCATCTaGGTATGGTGTTGGATATCT +
Preference number: 4 (lower is better)
Translates to: KGIKAMREIALPSVSGLKILKLI*VWCWIS
Trigger: AGATATCCAACACCATACCCAGATGAGCTTAAGAAT...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCGCTACGACTTTTGGCTaGTTAATAGAGGTTTCAATT +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVATTFG*LIEVSI
Trigger: AATTGAAACCTCTATTAACCAGCCAAAAGTCGTAGC...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCGATCTTCAGTGCTTTTaGAAATACCTAAGTCAACAG +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVDLQCF*KYLSQQ
Trigger: CTGTTGACTTAGGTATTTCCAAAAGCACTGAAGATC...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAAGATCTTCAGTGCTTTTaGAAATACCTAAGTCAACAG +
Preference number: 4 (lower is better)
Translates to: KGIKAMREIALPSVSGLKDLQCF*KYLSQQ
Trigger: CTGTTGACTTAGGTATTTCCAAAAGCACTGAAGATC...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTCACAACAGATCCAACTaGACCACTTTTCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAHNRSN*TTFLRG
Trigger: TCCCCTCAGAAAAGTGGTCCAGTTGGATCTGTTGTG...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTAGTAAATACCTGCAATaGTTGATCATACAACAGTGT +
Preference number: 4 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVSKYLQ*LIIQQC
Trigger: ACACTGTTGTATGATCAACCATTGCAGGTATTTACT...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ACCCTTCCAAATAGATTTCACACGTCAATCTCCATCAGAGAAACATTTCCCATCATTGTGGGCCACTTGTaGGGCCTCTTATTATATTTG +
Preference number: 4 (lower is better)
Translates to: TLPNRFHTSISIRETFPIIVGHL*GLLLYL
Trigger: CAAATATAATAAGAGGCCCCACAAGTGGCCCACAAT...GATGGGAAATGTTTCTCTGATGGAGATTGACGTGTGAAATCTATTTGGAAGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR CCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGTTTGGGGATTTTGTTTaGAGTGCCACAAAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRFGDFV*SATKCL
Trigger: AAGACACTTTGTGGCACTCCAAACAAAATCCCCAAA...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGACACTACTTTGTCGCTaGATTGTACTTCGAGTTACT +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRTLLCR*IVLRVT
Trigger: AGTAACTCGAAGTACAATCCAGCGACAAAGTAGTGT...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTACACTACTTTGTCGCTaGATTGTACTTCGAGTTACT +
Preference number: 4 (lower is better)
Translates to: MREIALPSVSGLKSRLTITLLCR*IVLRVT
Trigger: AGTAACTCGAAGTACAATCCAGCGACAAAGTAGTGT...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCCCGCCTTGTAGAGCCTaGATCACCAAGATTTACAGA +
Preference number: 4 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSPPCRA*ITKIYR
Trigger: TCTGTAAATCTTGGTGATCCAGGCTCTACAAGGCGG...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AAATCAGTGGATTTCCATAACACAGAAAATGCATGGACATGCATCTACAGTAGACCGCCTTGTAGAGCCTaGATCACCAAGATTTACAGA +
Preference number: 4 (lower is better)
Translates to: KSVDFHNTENAWTCIYSRPPCRA*ITKIYR
Trigger: TCTGTAAATCTTGGTGATCCAGGCTCTACAAGGCGG...TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATGGAAATCCACTGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTCCGCCTTGTAGAGCCTaGATCACCAAGATTTACAGA +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFPPCRA*ITKIYR
Trigger: TCTGTAAATCTTGGTGATCCAGGCTCTACAAGGCGG...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTTGTCTAGGAGAACAATaGGGCTGTGTATATGGAGGC +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFCLGEQ*GCVYGG
Trigger: GCCTCCATATACACAGCCCCATTGTTCTCCTAGACA...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000284037.10
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
CDS-3UTR CCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTGTTTTAGTCTGGCCTTaGAAAGTGAACCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAVLVWP*KVNPPA
Trigger: TGCTGGTGGGTTCACTTTCCAAGGCCAGACTAAAAC...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp ACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTCAAATCTCTTAGGCTTCGCTTGACATaGTTTCCTTCCCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: THSSIQYAHSKSQHFKSLRLRLT*FPSLHQ
Trigger: CTGATGAAGGGAAGGAAATCATGTCAAGCGAAGCCT...AAGAGATTTGAAGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCTTTCAAGGCTTCGCTTaGCATGATTTCCTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSFQGFA*HDFLPF
Trigger: GAAGGGAAGGAAATCATGTCAAGCGAAGCCTTGAAA...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
CDS-3UTR TCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTTTTCAAGGCTTCGCTTaGCATGATTTCCTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFFQGFA*HDFLPF
Trigger: GAAGGGAAGGAAATCATGTCAAGCGAAGCCTTGAAA...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
CDS-3UTR TCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTGTTAGGTTTAACAGCTaGGAAAATCCATCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAVRFNS*ENPSGS
Trigger: GCTCCCTGATGGATTTTCTCAGCTGTTAAACCTAAC...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTGTTAGGTTTAACAGCTaGGAAAATCCATCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFVRFNS*ENPSGS
Trigger: GCTCCCTGATGGATTTTCTCAGCTGTTAAACCTAAC...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR TCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTCTTCAGGCACTTCCGTaGATTCGTTACTTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPALQALP*IRYFPN
Trigger: ATTTGGGAAGTAACGAATTCACGGAAGTGCCTGAAG...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR TCA 90 bp TACACTGATACACATAGAAACCCTTTAAAGACTCTGGAAGTGTTGAGTTCACATCTTCAGGCACTTCCGTaGATTCGTTACTTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: YTDTHRNPLKTLEVLSSHLQALP*IRYFPN
Trigger: ATTTGGGAAGTAACGAATTCACGGAAGTGCCTGAAG...ATGTGAACTCAACACTTCCAGAGTCTTTAAAGGGTTTCTATGTGTATCAGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTCTTCAGGCACTTCCGTaGATTCGTTACTTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFLQALP*IRYFPN
Trigger: ATTTGGGAAGTAACGAATTCACGGAAGTGCCTGAAG...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTAAGCTGCCCAATAGATaGAGGCAAAGCTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFKLPNR*RQSFNF
Trigger: GAAGTTGAAGCTTTGCCTTCATCTATTGGGCAGCTT...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR TCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTAAGCTGCCCAATAGATaGAGGCAAAGCTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAKLPNR*RQSFNF
Trigger: GAAGTTGAAGCTTTGCCTTCATCTATTGGGCAGCTT...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR TCA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTGAATCAGTTTCTTTTTaGAGAGGTATCAGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTESVSF*RGIRGL
Trigger: CAAACCCCTGATACCTCTTCAAAAAGAAACTGATTC...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTCAGCTTCAGGTTCACTaGTCTTCTGTACAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAQLQVH*SSVQSF
Trigger: GAAACTCTGTACAGAAGATCAGTGAACCTGAAGCTG...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCCAGCTTCAGGTTCACTaGTCTTCTGTACAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSQLQVH*SSVQSF
Trigger: GAAACTCTGTACAGAAGATCAGTGAACCTGAAGCTG...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTAGTATTAAGAGAAACTaGATCAGACATCCGAGATGG +
Preference number: 4 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTSIKRN*IRHPRW
Trigger: CCATCTCGGATGTCTGATTCAGTTTCTCTTAATACT...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTGTTGTACTTGGCTGCTaGGGTCCATTATCACTAAGA +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAVVLGC*GPLSLR
Trigger: TCTTAGTGATAATGGACCTCAGCAGCCAAGTACAAC...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGGGCTCTTCGGGATTATaGTTTGAATCAAACTTGAAA +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRGSSGL*FESNLK
Trigger: TTTCAAGTTTGATTCAAATCATAATCCCGAAGAGCC...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGGCTCTTCGGGATTATaGTTTGAATCAAACTTGAAA +
Preference number: 4 (lower is better)
Translates to: MREIALPSVSGLKSRLTIGSSGL*FESNLK
Trigger: TTTCAAGTTTGATTCAAATCATAATCCCGAAGAGCC...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTCAAATCTCTTGCTGGGCCAAGTCTCTaGTGTAAATGGTATGCAGTA +
Preference number: 4 (lower is better)
Translates to: THSSIQYAHSKSQHFKSLAGPSL*CKWYAV
Trigger: TACTGCATACCATTTACATCAGAGACTTGGCCCAGC...AAGAGATTTGAAGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTAGCACTCTGAGGTCTTaGTGCATTTGGACCATCTAT +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFSTLRS*CIWTIY
Trigger: ATAGATGGTCCAAATGCATCAAGACCTCAGAGTGCT...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp AAGAATAAAGGGAACACCGAGACTTGTCTTAAAGAAGCTGTTTGTCATTCTTTTGGAGGAACATCTTTGTaGCTAAGTGTGGCTGATGAG +
Preference number: 4 (lower is better)
Translates to: KNKGNTETCLKEAVCHSFGGTSL*LSVADE
Trigger: CTCATCAGCCACACTTAGTCACAAAGATGTTCCTCC...AAAAGAATGACAAACAGCTTCTTTAAGACAAGTCTCGGTGTTCCCTTTATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR TCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTATAGTCAATGGCTATaGCAAGAACAGATCCTGCCG +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAYSQWL*QEQILP
Trigger: CGGCAGGATCTGTTCTTGTCATAGCCATTGACTATA...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp TACACTGATACACATAGAAACCCTTTAAAGACTCTGGAAGTGTTGAGTTCACATGCTGCCTACTTACTCTaGCTAGCAAGAATGGAAAGT +
Preference number: 4 (lower is better)
Translates to: YTDTHRNPLKTLEVLSSHAAYLL*LARMES
Trigger: ACTTTCCATTCTTGCTAGTCAGAGTAAGTAGGCAGC...ATGTGAACTCAACACTTCCAGAGTCTTTAAAGGGTTTCTATGTGTATCAGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTCATGCTCTGATTATCTaGGAGCCACATAGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAHALII*EPHSCQ
Trigger: TTGACAGCTATGTGGCTCTCAGATAATCAGAGCATG...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416865.6
CDS-3UTR TCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTCTTGACAGCATGCTCTaGTTATCTGAGAGCCACATA +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPALDSML*LSESHI
Trigger: TATGTGGCTCTCAGATAATCAGAGCATGCTGTCAAG...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416865.6
CDS-3UTR TCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTCTAGAGCTGCCACAGTaGAAACTGCTTACAGTAGTA +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPALELPQ*KLLTVV
Trigger: TACTACTGTAAGCAGTTTTCACTGTGGCAGCTCTAG...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416865.6
CDS-3UTR GCA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTTCAATCCACTTAGTTaGTCAAGTACTTCAGGCACT +
Preference number: 4 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTFNPLS*SSTSGT
Trigger: AGTGCCTGAAGTACTTGAGCAACTAAGTGGATTGAA...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTTCATCACATTCAAATaGAACTTGAGCCCGCTGTTT +
Preference number: 4 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTFITFK*NLSPLF
Trigger: AAACAGCGGGCTCAAGTTGCATTTGAATGTGATGAA...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCTTTCCATTTTCCAAGTaGTCAGTTTCCTCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVFPFSK*SVSSLE
Trigger: TTCTAAAGAGGAAACTGAGCACTTGGAAAATGGAAA...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTGGGAGAGATCTTCAGTaGTTTTGGAAATACCTAAGT +
Preference number: 4 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTGRDLQ*FWKYLS
Trigger: ACTTAGGTATTTCCAAAAGCACTGAAGATCTCTCCC...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTGGATTTTGTTTGGAGTaGCACAAAGTGTCTTTGACT +
Preference number: 4 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTGFCLE*HKVSLT
Trigger: AGTCAAAGACACTTTGTGGCACTCCAAACAAAATCC...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTCCCATCCCCATTCTTTaGTTCCAGATTTTTATAGAA +
Preference number: 4 (lower is better)
Translates to: MREIALPSVSGLKSRLTIPIPIL*FQIFIE
Trigger: TTCTATAAAAATCTGGAAGCAAAGAATGGGGATGGG...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTAGAACCTCTTCTGTCTaGAACACTCAAGGCAAGACT +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPARTSSV*NTQGKT
Trigger: AGTCTTGCCTTGAGTGTTGCAGACAGAAGAGGTTCT...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416865.6
CDS-3UTR CCA 90 bp GGTTTGCTGAAGATCCATTGTTCCGTGAGGCTTAATTCCTTTTCCAAAATTATAAACATCCTCAGTCCTTaGCTGTTGAGGGAACATGTA +
Preference number: 4 (lower is better)
Translates to: GLLKIHCSVRLNSFSKIINILSP*LLREHV
Trigger: TACATGTTCCCTCAACAGCCAAGGACTGAGGATGTT...TATAATTTTGGAAAAGGAATTAAGCCTCACGGAACAATGGATCTTCAGCAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR CCA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCAACATCCTCAGTCCTTaGCTGTTGAGGGAACATGTA +
Preference number: 4 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSNILSP*LLREHV
Trigger: TACATGTTCCCTCAACAGCCAAGGACTGAGGATGTT...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTAACATCCTCAGTCCTTaGCTGTTGAGGGAACATGTA +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPANILSP*LLREHV
Trigger: TACATGTTCCCTCAACAGCCAAGGACTGAGGATGTT...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCTTCCTGAGTCTTCATTaGTCTCTTCATCTTTTAATC +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVFLSLH*SLHLLI
Trigger: GATTAAAAGATGAAGAGACCAATGAAGACTCAGGAA...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGGCTACGACTTTTGGCTaGTTAATAGAGGTTTCAATT +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRATTFG*LIEVSI
Trigger: AATTGAAACCTCTATTAACCAGCCAAAAGTCGTAGC...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGGATCTTCAGTGCTTTTaGAAATACCTAAGTCAACAG +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRDLQCF*KYLSQQ
Trigger: CTGTTGACTTAGGTATTTCCAAAAGCACTGAAGATC...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAAAGTAAATACCTGCAATaGTTGATCATACAACAGTGT +
Preference number: 4 (lower is better)
Translates to: KGIKAMREIALPSVSGLKSKYLQ*LIIQQC
Trigger: ACACTGTTGTATGATCAACCATTGCAGGTATTTACT...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCGCCTCTTATTATATTTaGCTCTTCGGGATTATGATT +
Preference number: 4 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVASYYI*LFGIMI
Trigger: AATCATAATCCCGAAGAGCCAAATATAATAAGAGGC...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAAGCCTCTTATTATATTTaGCTCTTCGGGATTATGATT +
Preference number: 4 (lower is better)
Translates to: KGIKAMREIALPSVSGLKASYYI*LFGIMI
Trigger: AATCATAATCCCGAAGAGCCAAATATAATAAGAGGC...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AAATCAGTGGATTTCCATAACACAGAAAATGCATGGACATGCATCTACAGTAGACTGGCATGGTCTATTTaGGGATTTTGTTTGGAGTGC +
Preference number: 4 (lower is better)
Translates to: KSVDFHNTENAWTCIYSRLAWSI*GFCLEC
Trigger: GCACTCCAAACAAAATCCCCAAATAGACCATGCCAG...TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATGGAAATCCACTGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp GGTTTGCTGAAGATCCATTGTTCCGTGAGGCTTAATTCCTTTTCCAAAATTATAGATTTACAGAGGCTGTaGAGGACACACTACTTTGTC +
Preference number: 4 (lower is better)
Translates to: GLLKIHCSVRLNSFSKIIDLQRL*RTHYFV
Trigger: GACAAAGTAGTGTGTCCTCCACAGCCTCTGTAAATC...TATAATTTTGGAAAAGGAATTAAGCCTCACGGAACAATGGATCTTCAGCAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR CCA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCGATTTACAGAGGCTGTaGAGGACACACTACTTTGTC +
Preference number: 4 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSDLQRL*RTHYFV
Trigger: GACAAAGTAGTGTGTCCTCCACAGCCTCTGTAAATC...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTTTATATTCTGTACAGTaGTTCTTTCCCTCTAACCAC +
Preference number: 4 (lower is better)
Translates to: MREIALPSVSGLKSRLTILYSVQ*FFPSNH
Trigger: GTGGTTAGAGGGAAAGAACCACTGTACAGAATATAA...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTCTGCCATCTGTCTCTaGGCTAAAATCAAGGCTAAC +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPASAICL*AKIKAN
Trigger: GTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGA...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AAATCAGTGGATTTCCATAACACAGAAAATGCATGGACATGCATCTACAGTAGATCTGCCATCTGTCTCTaGGCTAAAATCAAGGCTAAC +
Preference number: 4 (lower is better)
Translates to: KSVDFHNTENAWTCIYSRSAICL*AKIKAN
Trigger: GTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGA...TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATGGAAATCCACTGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGAACACAGAAAATGCATaGACATGCATCTACAGTAGA +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRNTENA*TCIYSR
Trigger: TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTT...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp AAGAATAAAGGGAACACCGAGACTTGTCTTAAAGAAGCTGTTTGTCATTCTTTTTTTCAAGGCTTCGCTTaGCATGATTTCCTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: KNKGNTETCLKEAVCHSFFQGFA*HDFLPF
Trigger: GAAGGGAAGGAAATCATGTCAAGCGAAGCCTTGAAA...AAAAGAATGACAAACAGCTTCTTTAAGACAAGTCTCGGTGTTCCCTTTATTCTT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR TCA 90 bp AAGAATAAAGGGAACACCGAGACTTGTCTTAAAGAAGCTGTTTGTCATTCTTTTGTTAGGTTTAACAGCTaGGAAAATCCATCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: KNKGNTETCLKEAVCHSFVRFNS*ENPSGS
Trigger: GCTCCCTGATGGATTTTCTCAGCTGTTAAACCTAAC...AAAAGAATGACAAACAGCTTCTTTAAGACAAGTCTCGGTGTTCCCTTTATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR TCA 90 bp ACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTCAAATCTCTTCTTCAGGCACTTCCGTaGATTCGTTACTTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: THSSIQYAHSKSQHFKSLLQALP*IRYFPN
Trigger: ATTTGGGAAGTAACGAATTCACGGAAGTGCCTGAAG...AAGAGATTTGAAGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp GGTTTGCTGAAGATCCATTGTTCCGTGAGGCTTAATTCCTTTTCCAAAATTATAGTCTCAGGAAGCTGCTaGAGTGAATTGCTTGATAAT +
Preference number: 4 (lower is better)
Translates to: GLLKIHCSVRLNSFSKIIVSGSC*SELLDN
Trigger: ATTATCAAGCAATTCACTTCAGCAGCTTCCTGAGAC...TATAATTTTGGAAAAGGAATTAAGCCTCACGGAACAATGGATCTTCAGCAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR TCA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCGTCTCAGGAAGCTGCTaGAGTGAATTGCTTGATAAT +
Preference number: 4 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSVSGSC*SELLDN
Trigger: ATTATCAAGCAATTCACTTCAGCAGCTTCCTGAGAC...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTGTCTCAGGAAGCTGCTaGAGTGAATTGCTTGATAAT +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFVSGSC*SELLDN
Trigger: ATTATCAAGCAATTCACTTCAGCAGCTTCCTGAGAC...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR TCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTGTCTCAGGAAGCTGCTaGAGTGAATTGCTTGATAAT +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAVSGSC*SELLDN
Trigger: ATTATCAAGCAATTCACTTCAGCAGCTTCCTGAGAC...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR TCA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCTTTGGACTGATTATCTaGGAGCCACATAGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSFGLII*EPHSCQ
Trigger: TTGACAGCTATGTGGCTCTCAGATAATCAGTCCAAA...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp CATAACACAGAAAATGCATGGACATGCATCTACAGTAGAGTTAAAAATTTCCTGCAGCTTCAGGTTCACTaGTCTTCTGTACAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: HNTENAWTCIYSRVKNFLQLQVH*SSVQSF
Trigger: GAAACTCTGTACAGAAGATCAGTGAACCTGAAGCTG...CAGGAAATTTTTAACTCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTATCAGCTGTGGCTGTTaGGTCAACACTTTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFISCGC*VNTFLN
Trigger: ATTGAGAAAAGTGTTGACTCAACAGCCACAGCTGAT...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTATCAGCTGTGGCTGTTaGGTCAACACTTTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAISCGC*VNTFLN
Trigger: ATTGAGAAAAGTGTTGACTCAACAGCCACAGCTGAT...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTAATATCCTGTGTTTTTaGTCTTTCCATGATCTCTGG +
Preference number: 4 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTNILCF*SFHDLW
Trigger: CCAGAGATCATGGAAAGATCAAAAACACAGGATATT...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTAATACCTGCAATGGTTaGTCATACAACAGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFNTCNG*SYNSVA
Trigger: TGCCACACTGTTGTATGATCAACCATTGCAGGTATT...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp CATAACACAGAAAATGCATGGACATGCATCTACAGTAGAGTTAAAAATTTCCTGAGCACTCTGAGGTCTTaGTGCATTTGGACCATCTAT +
Preference number: 4 (lower is better)
Translates to: HNTENAWTCIYSRVKNFLSTLRS*CIWTIY
Trigger: ATAGATGGTCCAAATGCATCAAGACCTCAGAGTGCT...CAGGAAATTTTTAACTCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTGTCCACAGTGCTTATaGGGAAACTTCTCGTACAAT +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPACPQCL*GNFSYN
Trigger: ATTGTACGAGAAGTTTCCTCATAAGCACTGTGGACA...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR TCA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCTGTCCACAGTGCTTATaGGGAAACTTCTCGTACAAT +
Preference number: 4 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSCPQCL*GNFSYN
Trigger: ATTGTACGAGAAGTTTCCTCATAAGCACTGTGGACA...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTAGCAAGAATGGAAAGTaGGTCCAACTCACTTTTGCA +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPASKNGK*VQLTFA
Trigger: TGCAAAAGTGAGTTGGACTCACTTTCCATTCTTGCT...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp AAATCAGTGGATTTCCATAACACAGAAAATGCATGGACATGCATCTACAGTAGAAGCAAGAATGGAAAGTaGGTCCAACTCACTTTTGCA +
Preference number: 4 (lower is better)
Translates to: KSVDFHNTENAWTCIYSRSKNGK*VQLTFA
Trigger: TGCAAAAGTGAGTTGGACTCACTTTCCATTCTTGCT...TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATGGAAATCCACTGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp AAATCAGTGGATTTCCATAACACAGAAAATGCATGGACATGCATCTACAGTAGAAGATCCATTGTTCCGTaGGGCTTAATTCCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: KSVDFHNTENAWTCIYSRRSIVP*GLIPFP
Trigger: TGGAAAAGGAATTAAGCCTCACGGAACAATGGATCT...TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATGGAAATCCACTGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR TCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTGGAATTAAAGGACCTTaGCAGCATGCTCTGATTATC +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFGIKGP*QHALII
Trigger: GATAATCAGAGCATGCTGTCAAGGTCCTTTAATTCC...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416865.6
CDS-3UTR GCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGTTTCCATTTTCCAAGTaGTCAGTTTCCTCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRFPFSK*SVSSLE
Trigger: TTCTAAAGAGGAAACTGAGCACTTGGAAAATGGAAA...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTTTTCCATTTTCCAAGTaGTCAGTTTCCTCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: MREIALPSVSGLKSRLTIFPFSK*SVSSLE
Trigger: TTCTAAAGAGGAAACTGAGCACTTGGAAAATGGAAA...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp AAATCAGTGGATTTCCATAACACAGAAAATGCATGGACATGCATCTACAGTAGACAAAGTGTCTTTGACTaGAGCACTGCTACTGTATTG +
Preference number: 4 (lower is better)
Translates to: KSVDFHNTENAWTCIYSRQSVFD*STATVL
Trigger: CAATACAGTAGCAGTGCTGCAGTCAAAGACACTTTG...TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATGGAAATCCACTGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTGTACTTCGAGTTACTaGAGGAATAAGTCGGTCGTT +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPACTSSY*RNKSVV
Trigger: AACGACCGACTTATTCCTGCAGTAACTCGAAGTACA...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp TACACTGATACACATAGAAACCCTTTAAAGACTCTGGAAGTGTTGAGTTCACATTGTACTTCGAGTTACTaGAGGAATAAGTCGGTCGTT +
Preference number: 4 (lower is better)
Translates to: YTDTHRNPLKTLEVLSSHCTSSY*RNKSVV
Trigger: AACGACCGACTTATTCCTGCAGTAACTCGAAGTACA...ATGTGAACTCAACACTTCCAGAGTCTTTAAAGGGTTTCTATGTGTATCAGTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCTGTACTTCGAGTTACTaGAGGAATAAGTCGGTCGTT +
Preference number: 4 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSCTSSY*RNKSVV
Trigger: AACGACCGACTTATTCCTGCAGTAACTCGAAGTACA...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTATCAAGGCTAACTATTaGCTTGCACACAGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFIKANY*LAHSSV
Trigger: GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGAT...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCATCAAGGCTAACTATTaGCTTGCACACAGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSIKANY*LAHSSV
Trigger: GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGAT...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGAAAATGCATGGACATaGATCTACAGTAGAGTTAAA +
Preference number: 4 (lower is better)
Translates to: MREIALPSVSGLKSRLTIENAWT*IYSRVK
Trigger: TTTAACTCTACTGTAGATGCATGTCCATGCATTTTC...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTCAGTTTCACAAAGCTTaGTTTGGTTTCCTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAQFHKA*FGFLAP
Trigger: TGGAGCTAGGAAACCAAAGCAAGCTTTGTGAAACTG...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTCCAGTCTTTCCAGCTaGGTCAGTCTATTCATAGTT +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPASSLSS*VSLFIV
Trigger: AACTATGAATAGACTGACCCAGCTGGAAAGACTGGA...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCTTTAACGGTTGTACTTaGCTGCTGAGGTCCATTATC +
Preference number: 4 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSFNGCT*LLRSII
Trigger: GATAATGGACCTCAGCAGCCAAGTACAACCGTTAAA...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGAGTAAATACCTGCAATaGTTGATCATACAACAGTGT +
Preference number: 4 (lower is better)
Translates to: IKAMREIALPSVSGLKSRSKYLQ*LIIQQC
Trigger: ACACTGTTGTATGATCAACCATTGCAGGTATTTACT...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AAATCAGTGGATTTCCATAACACAGAAAATGCATGGACATGCATCTACAGTAGAGTTCTTCCCGCTGAGTaGAACTCTCTGTATGATAAA +
Preference number: 4 (lower is better)
Translates to: KSVDFHNTENAWTCIYSRVLPAE*NSLYDK
Trigger: TTTATCATACAGAGAGTTCCACTCAGCGGGAAGAAC...TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATGGAAATCCACTGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTGTTCTTCCCGCTGAGTaGAACTCTCTGTATGATAAA +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFVLPAE*NSLYDK
Trigger: TTTATCATACAGAGAGTTCCACTCAGCGGGAAGAAC...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTCAAATCTCTTCCTGAACTGGATGTCTaGGGATGCTTCTTTTCTAAC +
Preference number: 4 (lower is better)
Translates to: THSSIQYAHSKSQHFKSLPELDV*GCFFSN
Trigger: GTTAGAAAAGAAGCATCCCCAGACATCCAGTTCAGG...AAGAGATTTGAAGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR CCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTGCTAAATCCAAGTTCTaGATCCTTTTCAACCCTCAC +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAAKSKF*ILFNPH
Trigger: GTGAGGGTTGAAAAGGATCCAGAACTTGGATTTAGC...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR CCA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTTATATTCTGTACAGTaGTTCTTTCCCTCTAACCAC +
Preference number: 4 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTLYSVQ*FFPSNH
Trigger: GTGGTTAGAGGGAAAGAACCACTGTACAGAATATAA...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCTTTAGGTAGAATATaGTCAACTTTTTCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: MREIALPSVSGLKSRLTIALGRI*STFSEG
Trigger: ACCTTCAGAAAAAGTTGACCATATTCTACCTAAAGC...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR TCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTAGACACACTGGGTTaGATTTATCTCCCTGATGTT +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPALDTLG*IYLPDV
Trigger: AACATCAGGGAGATAAATTCAACCCAGTGTGTCTAA...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR TCA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCTTAGACACACTGGGTTaGATTTATCTCCCTGATGTT +
Preference number: 4 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSLDTLG*IYLPDV
Trigger: AACATCAGGGAGATAAATTCAACCCAGTGTGTCTAA...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp GAAAGTTGTAACAGAAGGATTCTTTTTGTCAGCCTCTCTCCTAAAGATTCTATAGTCTCAGGAAGCTGCTaGAGTGAATTGCTTGATAAT +
Preference number: 4 (lower is better)
Translates to: ESCNRRILFVSLSPKDSIVSGSC*SELLDN
Trigger: ATTATCAAGCAATTCACTTCAGCAGCTTCCTGAGAC...TATAGAATCTTTAGGAGAGAGGCTGACAAAAAGAATCCTTCTGTTACAACTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR TCA 90 bp TACACTGATACACATAGAAACCCTTTAAAGACTCTGGAAGTGTTGAGTTCACATGAATCAGTTTCTTTTTaGAGAGGTATCAGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: YTDTHRNPLKTLEVLSSHESVSF*RGIRGL
Trigger: CAAACCCCTGATACCTCTTCAAAAAGAAACTGATTC...ATGTGAACTCAACACTTCCAGAGTCTTTAAAGGGTTTCTATGTGTATCAGTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTAGTATTAAGAGAAACTaGATCAGACATCCGAGATGG +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPASIKRN*IRHPRW
Trigger: CCATCTCGGATGTCTGATTCAGTTTCTCTTAATACT...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCCAGAGTGAGGTGTCTTaGCTACTATCAGTATTAAGA +
Preference number: 4 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSQSEVS*LLSVLR
Trigger: TCTTAATACTGATAGTAGTCAAGACACCTCACTCTG...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp GAAAGTTGTAACAGAAGGATTCTTTTTGTCAGCCTCTCTCCTAAAGATTCTATAAATACCTGCAATGGTTaGTCATACAACAGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: ESCNRRILFVSLSPKDSINTCNG*SYNSVA
Trigger: TGCCACACTGTTGTATGATCAACCATTGCAGGTATT...TATAGAATCTTTAGGAGAGAGGCTGACAAAAAGAATCCTTCTGTTACAACTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR TCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTCTGCTGTCCTGAAATaGATATACCATCTTGACAAG +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPASAVLK*IYHLDK
Trigger: CTTGTCAAGATGGTATATTCATTTCAGGACAGCAGA...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR TCA 90 bp AAGAATAAAGGGAACACCGAGACTTGTCTTAAAGAAGCTGTTTGTCATTCTTTTTGTCCACAGTGCTTATaGGGAAACTTCTCGTACAAT +
Preference number: 4 (lower is better)
Translates to: KNKGNTETCLKEAVCHSFCPQCL*GNFSYN
Trigger: ATTGTACGAGAAGTTTCCTCATAAGCACTGTGGACA...AAAAGAATGACAAACAGCTTCTTTAAGACAAGTCTCGGTGTTCCCTTTATTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR GCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTTTCAATCCACTTAGTTaGTCAAGTACTTCAGGCACT +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFFNPLS*SSTSGT
Trigger: AGTGCCTGAAGTACTTGAGCAACTAAGTGGATTGAA...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR GCA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCGCTGCTGAAGTGAATTaGTTGATAATAGGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSAAEVN*LIIGGL
Trigger: AAGACCTCCTATTATCAAGCAATTCACTTCAGCAGC...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTGCTGCTGAAGTGAATTaGTTGATAATAGGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFAAEVN*LIIGGL
Trigger: AAGACCTCCTATTATCAAGCAATTCACTTCAGCAGC...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR GCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTTTCATCACATTCAAATaGAACTTGAGCCCGCTGTTT +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFFITFK*NLSPLF
Trigger: AAACAGCGGGCTCAAGTTGCATTTGAATGTGATGAA...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp TACACTGATACACATAGAAACCCTTTAAAGACTCTGGAAGTGTTGAGTTCACATGGGAGAGATCTTCAGTaGTTTTGGAAATACCTAAGT +
Preference number: 4 (lower is better)
Translates to: YTDTHRNPLKTLEVLSSHGRDLQ*FWKYLS
Trigger: ACTTAGGTATTTCCAAAAGCACTGAAGATCTCTCCC...ATGTGAACTCAACACTTCCAGAGTCTTTAAAGGGTTTCTATGTGTATCAGTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTGGATTTTGTTTGGAGTaGCACAAAGTGTCTTTGACT +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAGFCLE*HKVSLT
Trigger: AGTCAAAGACACTTTGTGGCACTCCAAACAAAATCC...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp TACACTGATACACATAGAAACCCTTTAAAGACTCTGGAAGTGTTGAGTTCACATCATTTGGACCATCTATaGTGTATGTTCGTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: YTDTHRNPLKTLEVLSSHHLDHL*CMFVQK
Trigger: TTTCTGCACGAACATACAGCATAGATGGTCCAAATG...ATGTGAACTCAACACTTCCAGAGTCTTTAAAGGGTTTCTATGTGTATCAGTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCCATTTGGACCATCTATaGTGTATGTTCGTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSHLDHL*CMFVQK
Trigger: TTTCTGCACGAACATACAGCATAGATGGTCCAAATG...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTCATTTGGACCATCTATaGTGTATGTTCGTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFHLDHL*CMFVQK
Trigger: TTTCTGCACGAACATACAGCATAGATGGTCCAAATG...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp GAAAGTTGTAACAGAAGGATTCTTTTTGTCAGCCTCTCTCCTAAAGATTCTATAGACAAGAACAGATCCTaGCGAGCTCATAAATGCAAT +
Preference number: 4 (lower is better)
Translates to: ESCNRRILFVSLSPKDSIDKNRS*RAHKCN
Trigger: ATTGCATTTATGAGCTCGGCAGGATCTGTTCTTGTC...TATAGAATCTTTAGGAGAGAGGCTGACAAAAAGAATCCTTCTGTTACAACTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR GCA 90 bp CATAACACAGAAAATGCATGGACATGCATCTACAGTAGAGTTAAAAATTTCCTGCAGTTTCACAAAGCTTaGTTTGGTTTCCTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: HNTENAWTCIYSRVKNFLQFHKA*FGFLAP
Trigger: TGGAGCTAGGAAACCAAAGCAAGCTTTGTGAAACTG...CAGGAAATTTTTAACTCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp TACACTGATACACATAGAAACCCTTTAAAGACTCTGGAAGTGTTGAGTTCACATCTTCATCAGTCACTTTaGATCCAGCTGAATATCTCT +
Preference number: 4 (lower is better)
Translates to: YTDTHRNPLKTLEVLSSHLHQSL*IQLNIS
Trigger: AGAGATATTCAGCTGGATCCAAAGTGACTGATGAAG...ATGTGAACTCAACACTTCCAGAGTCTTTAAAGGGTTTCTATGTGTATCAGTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp GGTTTGCTGAAGATCCATTGTTCCGTGAGGCTTAATTCCTTTTCCAAAATTATACTTCATCAGTCACTTTaGATCCAGCTGAATATCTCT +
Preference number: 4 (lower is better)
Translates to: GLLKIHCSVRLNSFSKIILHQSL*IQLNIS
Trigger: AGAGATATTCAGCTGGATCCAAAGTGACTGATGAAG...TATAATTTTGGAAAAGGAATTAAGCCTCACGGAACAATGGATCTTCAGCAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR CCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTCTTCATCAGTCACTTTaGATCCAGCTGAATATCTCT +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPALHQSL*IQLNIS
Trigger: AGAGATATTCAGCTGGATCCAAAGTGACTGATGAAG...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
CDS-3UTR CCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTGTAAGCACCATTTTCTaGGTCTCTGAATCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAVSTIF*VSESVS
Trigger: AGAAACTGATTCAGAGACCCAGAAAATGGTGCTTAC...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTGTAAGCACCATTTTCTaGGTCTCTGAATCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFVSTIF*VSESVS
Trigger: AGAAACTGATTCAGAGACCCAGAAAATGGTGCTTAC...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTAAGTGCTACGACTTTTaGCTGGTTAATAGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAKCYDF*LVNRGF
Trigger: GAAACCTCTATTAACCAGCCAAAAGTCGTAGCACTT...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AAATCAGTGGATTTCCATAACACAGAAAATGCATGGACATGCATCTACAGTAGAAAGTGCTACGACTTTTaGCTGGTTAATAGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: KSVDFHNTENAWTCIYSRKCYDF*LVNRGF
Trigger: GAAACCTCTATTAACCAGCCAAAAGTCGTAGCACTT...TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATGGAAATCCACTGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTATCAGACATCCGAGATaGAGAAGAACAATTGCTGTT +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFIRHPR*RRTIAV
Trigger: AACAGCAATTGTTCTTCTCCATCTCGGATGTCTGAT...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTATCAGACATCCGAGATaGAGAAGAACAATTGCTGTT +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAIRHPR*RRTIAV
Trigger: AACAGCAATTGTTCTTCTCCATCTCGGATGTCTGAT...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTACAATCACTGTCATGTaGTTCAGTCCTATTAGGAGA +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPATITVM*FSPIRR
Trigger: TCTCCTAATAGGACTGAACCACATGACAGTGATTGT...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCGCACTGCTACTGTATTaGATATTATACTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSALLLY*ILYCGG
Trigger: TCCTCCACAGTATAATATCCAATACAGTAGCAGTGC...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp TACACTGATACACATAGAAACCCTTTAAAGACTCTGGAAGTGTTGAGTTCACATTTTGGGGATTTTGTTTaGAGTGCCACAAAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: YTDTHRNPLKTLEVLSSHFGDFV*SATKCL
Trigger: AAGACACTTTGTGGCACTCCAAACAAAATCCCCAAA...ATGTGAACTCAACACTTCCAGAGTCTTTAAAGGGTTTCTATGTGTATCAGTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTTTTGGGGATTTTGTTTaGAGTGCCACAAAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFFGDFV*SATKCL
Trigger: AAGACACTTTGTGGCACTCCAAACAAAATCCCCAAA...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 23 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp CATAACACAGAAAATGCATGGACATGCATCTACAGTAGAGTTAAAAATTTCCTGGTTCTTCCCGCTGAGTaGAACTCTCTGTATGATAAA +
Preference number: 4 (lower is better)
Translates to: HNTENAWTCIYSRVKNFLVLPAE*NSLYDK
Trigger: TTTATCATACAGAGAGTTCCACTCAGCGGGAAGAAC...CAGGAAATTTTTAACTCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCTTTCATCAAGCTGTCTaGAGGAACATCTTTGTGACT +
Preference number: 4 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSFHQAV*RNIFVT
Trigger: AGTCACAAAGATGTTCCTCCAGACAGCTTGATGAAA...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR CCA 90 bp ACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTCAAATCTCTTTCACAAAGCTTGCTTTaGTTTCCTAGCTCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: THSSIQYAHSKSQHFKSLSQSLL*FPSSKC
Trigger: ACACTTGGAGCTAGGAAACCAAAGCAAGCTTTGTGA...AAGAGATTTGAAGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
3UTR CAA 72 bp GATACACATAGAAACCCTTTAAAGACTCTGGAAGTGTaGAGTTCACATTTAATGTTACCTGTAGAAACAGCC +
Preference number: 4 (lower is better)
Translates to: DTHRNPLKTLEV*SSHLMLPVETA
Trigger: GGCTGTTTCTACAGGTAACATTAAATGTGAACTCAACACTTCCAGAGTCTTTAAAGGGTTTCTATGTGTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp CATAACACAGAAAATGCATGGACATGCATCTACAGTAGAGTTAAAAATTTCCTGTTAGACACACTGGGTTaGATTTATCTCCCTGATGTT +
Preference number: 4 (lower is better)
Translates to: HNTENAWTCIYSRVKNFLLDTLG*IYLPDV
Trigger: AACATCAGGGAGATAAATTCAACCCAGTGTGTCTAA...CAGGAAATTTTTAACTCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTGATAATAGGAGGTCTTaGAGGTTTTCACATGTTGAA +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPADNRRS*RFSHVE
Trigger: TTCAACATGTGAAAACCTTCAAGACCTCCTATTATC...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTGATAATAGGAGGTCTTaGAGGTTTTCACATGTTGAA +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFDNRRS*RFSHVE
Trigger: TTCAACATGTGAAAACCTTCAAGACCTCCTATTATC...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTCAAATCTCTTGAATCAGTTTCTTTTTaGAGAGGTATCAGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: THSSIQYAHSKSQHFKSLESVSF*RGIRGL
Trigger: CAAACCCCTGATACCTCTTCAAAAAGAAACTGATTC...AAGAGATTTGAAGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp AAGAATAAAGGGAACACCGAGACTTGTCTTAAAGAAGCTGTTTGTCATTCTTTTCAGAGTGAGGTGTCTTaGCTACTATCAGTATTAAGA +
Preference number: 4 (lower is better)
Translates to: KNKGNTETCLKEAVCHSFQSEVS*LLSVLR
Trigger: TCTTAATACTGATAGTAGTCAAGACACCTCACTCTG...AAAAGAATGACAAACAGCTTCTTTAAGACAAGTCTCGGTGTTCCCTTTATTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR TCA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCAATATCCTGTGTTTTTaGTCTTTCCATGATCTCTGG +
Preference number: 4 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSNILCF*SFHDLW
Trigger: CCAGAGATCATGGAAAGATCAAAAACACAGGATATT...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTAATATCCTGTGTTTTTaGTCTTTCCATGATCTCTGG +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFNILCF*SFHDLW
Trigger: CCAGAGATCATGGAAAGATCAAAAACACAGGATATT...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTGGCTCTTCGGGATTATaGTTTGAATCAAACTTGAAA +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAGSSGL*FESNLK
Trigger: TTTCAAGTTTGATTCAAATCATAATCCCGAAGAGCC...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCGGCTCTTCGGGATTATaGTTTGAATCAAACTTGAAA +
Preference number: 4 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSGSSGL*FESNLK
Trigger: TTTCAAGTTTGATTCAAATCATAATCCCGAAGAGCC...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR TCA 90 bp CATAACACAGAAAATGCATGGACATGCATCTACAGTAGAGTTAAAAATTTCCTGCTTTCCAAAACTAAATaGCTACTTACTATCCCCTGG +
Preference number: 4 (lower is better)
Translates to: HNTENAWTCIYSRVKNFLLSKTK*LLTIPW
Trigger: CCAGGGGATAGTAAGTAGTCATTTAGTTTTGGAAAG...CAGGAAATTTTTAACTCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR GCA 90 bp ACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTCAAATCTCTTTTCAATCCACTTAGTTaGTCAAGTACTTCAGGCACT +
Preference number: 4 (lower is better)
Translates to: THSSIQYAHSKSQHFKSLFNPLS*SSTSGT
Trigger: AGTGCCTGAAGTACTTGAGCAACTAAGTGGATTGAA...AAGAGATTTGAAGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp ACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTCAAATCTCTTGCTGCTGAAGTGAATTaGTTGATAATAGGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: THSSIQYAHSKSQHFKSLAAEVN*LIIGGL
Trigger: AAGACCTCCTATTATCAAGCAATTCACTTCAGCAGC...AAGAGATTTGAAGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTCTTAAGTTAGTAAGCTaGCCAATAGATGAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPALKLVS*PIDEGK
Trigger: TTTGCCTTCATCTATTGGGCAGCTTACTAACTTAAG...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR GCA 90 bp GGTTTGCTGAAGATCCATTGTTCCGTGAGGCTTAATTCCTTTTCCAAAATTATATCATGGTTAACAATATaGTTCAAGTTCTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GLLKIHCSVRLNSFSKIISWLTI*FKFSEA
Trigger: AGCCTCTGAGAACTTGAAGCATATTGTTAACCATGA...TATAATTTTGGAAAAGGAATTAAGCCTCACGGAACAATGGATCTTCAGCAAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR GCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTCATGGTTAACAATATaGTTCAAGTTCTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPASWLTI*FKFSEA
Trigger: AGCCTCTGAGAACTTGAAGCATATTGTTAACCATGA...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR GCA 90 bp AAGAATAAAGGGAACACCGAGACTTGTCTTAAAGAAGCTGTTTGTCATTCTTTTGGGAGAGATCTTCAGTaGTTTTGGAAATACCTAAGT +
Preference number: 4 (lower is better)
Translates to: KNKGNTETCLKEAVCHSFGRDLQ*FWKYLS
Trigger: ACTTAGGTATTTCCAAAAGCACTGAAGATCTCTCCC...AAAAGAATGACAAACAGCTTCTTTAAGACAAGTCTCGGTGTTCCCTTTATTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR CCA 90 bp ACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTCAAATCTCTTCTTCATCAGTCACTTTaGATCCAGCTGAATATCTCT +
Preference number: 4 (lower is better)
Translates to: THSSIQYAHSKSQHFKSLLHQSL*IQLNIS
Trigger: AGAGATATTCAGCTGGATCCAAAGTGACTGATGAAG...AAGAGATTTGAAGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp AAATCAGTGGATTTCCATAACACAGAAAATGCATGGACATGCATCTACAGTAGAATCACCCATTTCCTCTaGAAGTGTCTCAAGTTTATT +
Preference number: 4 (lower is better)
Translates to: KSVDFHNTENAWTCIYSRITHFL*KCLKFI
Trigger: AATAAACTTGAGACACTTCCAGAGGAAATGGGTGAT...TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATGGAAATCCACTGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCATCACCCATTTCCTCTaGAAGTGTCTCAAGTTTATT +
Preference number: 4 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSITHFL*KCLKFI
Trigger: AATAAACTTGAGACACTTCCAGAGGAAATGGGTGAT...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTATCACCCATTTCCTCTaGAAGTGTCTCAAGTTTATT +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAITHFL*KCLKFI
Trigger: AATAAACTTGAGACACTTCCAGAGGAAATGGGTGAT...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTATTCTTAAGCTCATCTaGGTATGGTGTTGGATATCT +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAILKLI*VWCWIS
Trigger: AGATATCCAACACCATACCCAGATGAGCTTAAGAAT...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCATTCTTAAGCTCATCTaGGTATGGTGTTGGATATCT +
Preference number: 4 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSILKLI*VWCWIS
Trigger: AGATATCCAACACCATACCCAGATGAGCTTAAGAAT...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp CTTCCAAATAGATTTCACACGTCAATCTCCATCAGAGAAACATTTCCCATCTTAGCTACGACTTTTGGCTaGTTAATAGAGGTTTCAATT +
Preference number: 4 (lower is better)
Translates to: LPNRFHTSISIRETFPILATTFG*LIEVSI
Trigger: AATTGAAACCTCTATTAACCAGCCAAAAGTCGTAGC...TAAGATGGGAAATGTTTCTCTGATGGAGATTGACGTGTGAAATCTATTTGGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR CCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTGCTACGACTTTTGGCTaGTTAATAGAGGTTTCAATT +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAATTFG*LIEVSI
Trigger: AATTGAAACCTCTATTAACCAGCCAAAAGTCGTAGC...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AAGAATAAAGGGAACACCGAGACTTGTCTTAAAGAAGCTGTTTGTCATTCTTTTAAGTGCTACGACTTTTaGCTGGTTAATAGAGGTTTC +
Preference number: 4 (lower is better)
Translates to: KNKGNTETCLKEAVCHSFKCYDF*LVNRGF
Trigger: GAAACCTCTATTAACCAGCCAAAAGTCGTAGCACTT...AAAAGAATGACAAACAGCTTCTTTAAGACAAGTCTCGGTGTTCCCTTTATTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR CCA 90 bp TACACTGATACACATAGAAACCCTTTAAAGACTCTGGAAGTGTTGAGTTCACATGATCTTCAGTGCTTTTaGAAATACCTAAGTCAACAG +
Preference number: 4 (lower is better)
Translates to: YTDTHRNPLKTLEVLSSHDLQCF*KYLSQQ
Trigger: CTGTTGACTTAGGTATTTCCAAAAGCACTGAAGATC...ATGTGAACTCAACACTTCCAGAGTCTTTAAAGGGTTTCTATGTGTATCAGTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp AAGAATAAAGGGAACACCGAGACTTGTCTTAAAGAAGCTGTTTGTCATTCTTTTGCACTGCTACTGTATTaGATATTATACTGTGGAGGA +
Preference number: 4 (lower is better)
Translates to: KNKGNTETCLKEAVCHSFALLLY*ILYCGG
Trigger: TCCTCCACAGTATAATATCCAATACAGTAGCAGTGC...AAAAGAATGACAAACAGCTTCTTTAAGACAAGTCTCGGTGTTCCCTTTATTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR CCA 90 bp AAGAATAAAGGGAACACCGAGACTTGTCTTAAAGAAGCTGTTTGTCATTCTTTTACACTACTTTGTCGCTaGATTGTACTTCGAGTTACT +
Preference number: 4 (lower is better)
Translates to: KNKGNTETCLKEAVCHSFTLLCR*IVLRVT
Trigger: AGTAACTCGAAGTACAATCCAGCGACAAAGTAGTGT...AAAAGAATGACAAACAGCTTCTTTAAGACAAGTCTCGGTGTTCCCTTTATTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR CCA 90 bp GGTTTGCTGAAGATCCATTGTTCCGTGAGGCTTAATTCCTTTTCCAAAATTATATTATATTCTGTACAGTaGTTCTTTCCCTCTAACCAC +
Preference number: 4 (lower is better)
Translates to: GLLKIHCSVRLNSFSKIILYSVQ*FFPSNH
Trigger: GTGGTTAGAGGGAAAGAACCACTGTACAGAATATAA...TATAATTTTGGAAAAGGAATTAAGCCTCACGGAACAATGGATCTTCAGCAAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR CCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTTTATATTCTGTACAGTaGTTCTTTCCCTCTAACCAC +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFLYSVQ*FFPSNH
Trigger: GTGGTTAGAGGGAAAGAACCACTGTACAGAATATAA...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR CCA 90 bp GGTTTGCTGAAGATCCATTGTTCCGTGAGGCTTAATTCCTTTTCCAAAATTATAAACACAGAAAATGCATaGACATGCATCTACAGTAGA +
Preference number: 4 (lower is better)
Translates to: GLLKIHCSVRLNSFSKIINTENA*TCIYSR
Trigger: TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTT...TATAATTTTGGAAAAGGAATTAAGCCTCACGGAACAATGGATCTTCAGCAAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR CCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTAACACAGAAAATGCATaGACATGCATCTACAGTAGA +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPANTENA*TCIYSR
Trigger: TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTT...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR TCA 90 bp CATAACACAGAAAATGCATGGACATGCATCTACAGTAGAGTTAAAAATTTCCTGGATAATAGGAGGTCTTaGAGGTTTTCACATGTTGAA +
Preference number: 4 (lower is better)
Translates to: HNTENAWTCIYSRVKNFLDNRRS*RFSHVE
Trigger: TTCAACATGTGAAAACCTTCAAGACCTCCTATTATC...CAGGAAATTTTTAACTCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp TACACTGATACACATAGAAACCCTTTAAAGACTCTGGAAGTGTTGAGTTCACATGAAAATGCATGGACATaGATCTACAGTAGAGTTAAA +
Preference number: 4 (lower is better)
Translates to: YTDTHRNPLKTLEVLSSHENAWT*IYSRVK
Trigger: TTTAACTCTACTGTAGATGCATGTCCATGCATTTTC...ATGTGAACTCAACACTTCCAGAGTCTTTAAAGGGTTTCTATGTGTATCAGTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp ACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTCAAATCTCTTACTTTACCAAGGCAATaGAAGGCCAAACAAAAATCA +
Preference number: 4 (lower is better)
Translates to: THSSIQYAHSKSQHFKSLTLPRQ*KAKQKS
Trigger: TGATTTTTGTTTGGCCTTGCATTGCCTTGGTAAAGT...AAGAGATTTGAAGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp AAATCAGTGGATTTCCATAACACAGAAAATGCATGGACATGCATCTACAGTAGAGCAATAACCAAATATTaGTCTAATGAAAGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: KSVDFHNTENAWTCIYSRAITKY*SNERFQ
Trigger: CTGGAACCTTTCATTAGAGCAATATTTGGTTATTGC...TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATGGAAATCCACTGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTGCAATAACCAAATATTaGTCTAATGAAAGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAAITKY*SNERFQ
Trigger: CTGGAACCTTTCATTAGAGCAATATTTGGTTATTGC...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp ACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTCAAATCTCTTATTCTTAAGCTCATCTaGGTATGGTGTTGGATATCT +
Preference number: 4 (lower is better)
Translates to: THSSIQYAHSKSQHFKSLILKLI*VWCWIS
Trigger: AGATATCCAACACCATACCCAGATGAGCTTAAGAAT...AAGAGATTTGAAGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTTTCCTGAGTCTTCATTaGTCTCTTCATCTTTTAATC +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFFLSLH*SLHLLI
Trigger: GATTAAAAGATGAAGAGACCAATGAAGACTCAGGAA...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp CATAACACAGAAAATGCATGGACATGCATCTACAGTAGAGTTAAAAATTTCCTGGATCTTCAGTGCTTTTaGAAATACCTAAGTCAACAG +
Preference number: 4 (lower is better)
Translates to: HNTENAWTCIYSRVKNFLDLQCF*KYLSQQ
Trigger: CTGTTGACTTAGGTATTTCCAAAAGCACTGAAGATC...CAGGAAATTTTTAACTCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTAGTAAATACCTGCAATaGTTGATCATACAACAGTGT +
Preference number: 4 (lower is better)
Translates to: INFPCKYLPINLAVFPAFSKYLQ*LIIQQC
Trigger: ACACTGTTGTATGATCAACCATTGCAGGTATTTACT...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTGCCTCTTATTATATTTaGCTCTTCGGGATTATGATT +
Preference number: 4 (lower is better)
Translates to: NINFPCKYLPINLAVFPAASYYI*LFGIMI
Trigger: AATCATAATCCCGAAGAGCCAAATATAATAAGAGGC...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CCA 90 bp GAAAGTTGTAACAGAAGGATTCTTTTTGTCAGCCTCTCTCCTAAAGATTCTATACTACTTACTATCCCCTaGGCTTATGAATTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: ESCNRRILFVSLSPKDSILLTIP*AYEFCK
Trigger: TTTACAGAATTCATAAGCCCAGGGGATAGTAAGTAG...TATAGAATCTTTAGGAGAGAGGCTGACAAAAAGAATCCTTCTGTTACAACTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284037.10
3UTR CAA 72 bp AAAATCAAAGAGGCTTTCCTAAACCTTCGTAACATTTaGTGTTACAGGCAACACAATCTTAAAACTGGCCAT +
Preference number: 4 (lower is better)
Translates to: KIKEAFLNLRNI*CYRQHNLKTGH
Trigger: ATGGCCAGTTTTAAGATTGTGTTGCCTGTAACACAAAATGTTACGAAGGTTTAGGAAAGCCTCTTTGATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR GCA 90 bp ACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTCAAATCTCTTGAAAATGCATGGACATaGATCTACAGTAGAGTTAAA +
Preference number: 4 (lower is better)
Translates to: THSSIQYAHSKSQHFKSLENAWT*IYSRVK
Trigger: TTTAACTCTACTGTAGATGCATGTCCATGCATTTTC...AAGAGATTTGAAGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CCA 90 bp CATAACACAGAAAATGCATGGACATGCATCTACAGTAGAGTTAAAAATTTCCTGTTCCTGAGTCTTCATTaGTCTCTTCATCTTTTAATC +
Preference number: 4 (lower is better)
Translates to: HNTENAWTCIYSRVKNFLFLSLH*SLHLLI
Trigger: GATTAAAAGATGAAGAGACCAATGAAGACTCAGGAA...CAGGAAATTTTTAACTCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS TCA 90 bp TCCCTTCATCAGTCACTTTGGATCCAGCTGAATATCTCTCTCGGGTaGGAGCGGATGTGGACTGGCCTCCCACAGAAGAAGAGTAGGTGG +
Preference number: 5 (lower is better)
Translates to: SLHQSLWIQLNISLG*ERMWTGLPQKKSRW
Trigger: CCACCTACTCTTCTTCTGTGGGAGGCCAGTCCACATCCGCTCTCACCCGAGAGAGATATTCAGCTGGATCCAAAGTGACTGATGAAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000507490.1
CDS TCA 90 bp CTGGATTGTACTTCGAGTTACTGCAGGAATAAGTCGGTCGTTTGGTaGGATGGCCCACATTTCCCCATGTCTTGCTGGGCCAAGTCTCTG +
Preference number: 5 (lower is better)
Translates to: LDCTSSYCRNKSVVW*DGPHFPMSCWAKSL
Trigger: CAGAGACTTGGCCCAGCAAGACATGGGGAAATGTGGGCCATCTCACCAAACGACCGACTTATTCCTGCAGTAACTCGAAGTACAATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS-3UTR CAA 90 bp GGGCCGATTGAGAAGCTAGATGGGCAGATGCGTGACAGATCACCATTGTCCCTGGAGGTCTTGATGCATTaGGACCATCTATGCTGTATG +
Preference number: 5 (lower is better)
Translates to: GPIEKLDGQMRDRSPLSLEVLMH*DHLCCM
Trigger: CATACAGCATAGATGGTCCAAATGCATCAAGACCTC...CAGGGACAATGGTGATCTGTCACGCATCTGCCCATCTAGCTTCTCAATCGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS CCA 90 bp CGAATCTCTTGTTTTGCCAGTTCATGGCCTTGTCTAGGAGAACAATaGGGCTGTGTATATGGAGGCTGGTGGGCCACTTTCAGCATCAAG +
Preference number: 5 (lower is better)
Translates to: RISCFASSWPCLGEQ*GCVYGGWWATFSIK
Trigger: CTTGATGCTGAAAGTGGCCCACCAGCCTCCATATACACAGCCCCATTGTTCTCCTAGACAAGGCCATGAACTGGCAAAACAAGAGATTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000505822.1
ENST00000506030.5
ENST00000511297.5
CDS-3UTR CAA 90 bp GGGCCGATTGAGAAGCTAGATGGGCAGATGCGTGACAGATCACCATTGTCCCTGTGGATGCTGGTAACGTaGTTAAATCATTGTCTGGCA +
Preference number: 5 (lower is better)
Translates to: GPIEKLDGQMRDRSPLSLWMLVT*LNHCLA
Trigger: TGCCAGACAATGATTTAACAACGTTACCAGCATCCA...CAGGGACAATGGTGATCTGTCACGCATCTGCCCATCTAGCTTCTCAATCGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR CAA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTGTGATCCTGGCATCATaGGAGGAGTTCTTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVVILAS*EEFFPL
Trigger: CAGCGGGAAGAACTCCTCCAATGATGCCAGGATCAC...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACGTGATCCTGGCATCATaGGAGGAGTTCTTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: IALPSVSGLKSRLTIALHVILAS*EEFFPL
Trigger: CAGCGGGAAGAACTCCTCCAATGATGCCAGGATCAC...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCGTGATCCTGGCATCATaGGAGGAGTTCTTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVVILAS*EEFFPL
Trigger: CAGCGGGAAGAACTCCTCCAATGATGCCAGGATCAC...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCTCAGTCCTTGGCTGTaGAGGGAACATGTAGTTGGT +
Preference number: 5 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVLSPWL*REHVVG
Trigger: ACCAACTACATGTTCCCTCAACAGCCAAGGACTGAG...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACATTTCCCCATGTCTaGCTGGGCCAAGTCTCTGAT +
Preference number: 5 (lower is better)
Translates to: IALPSVSGLKSRLTIALHTFPHV*LGQVSD
Trigger: ATCAGAGACTTGGCCCAGCAAGACATGGGGAAATGT...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTGGAGGACACACTACTTaGTCGCTGGATTGTACTTCG +
Preference number: 5 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVGGHTT*SLDCTS
Trigger: CGAAGTACAATCCAGCGACAAAGTAGTGTGTCCTCC...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATGCCAGTTCATGGCCTaGTCTAGGAGAACAATGGGG +
Preference number: 5 (lower is better)
Translates to: KGIKAMREIALPSVSGLKCQFMA*SRRTMG
Trigger: CCCCATTGTTCTCCTAGACAAGGCCATGAACTGGCA...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380938.6
ENST00000380943.6
CDS-3UTR CAA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACCCTCACTCGAATCTCTaGTTTTGCCAGTTCATGGCC +
Preference number: 5 (lower is better)
Translates to: IALPSVSGLKSRLTIALHPHSNL*FCQFMA
Trigger: GGCCATGAACTGGCAAAACAAGAGATTCGAGTGAGG...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380938.6
ENST00000380943.6
CDS-3UTR CAA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACTGTTTTAGTCTGGCCTaGGAAAGTGAACCCACCAGC +
Preference number: 5 (lower is better)
Translates to: IALPSVSGLKSRLTIALHCFSLA*ESEPTS
Trigger: GCTGGTGGGTTCACTTTCCAAGGCCAGACTAAAACA...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS CCA 90 bp TCACCAAGATTTACAGAGGCTGTGGAGGACACACTACTTTGTCGCTaGATTGTACTTCGAGTTACTGCAGGAATAAGTCGGTCGTTTGGT +
Preference number: 5 (lower is better)
Translates to: SPRFTEAVEDTLLCR*IVLRVTAGISRSFG
Trigger: ACCAAACGACCGACTTATTCCTGCAGTAACTCGAAGTACAATCCAGCGACAAAGTAGTGTGTCCTCCACAGCCTCTGTAAATCTTGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS-3UTR CAA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGAATCCATCAGGGAGCTaGGAAATAGGGTTTACACTG +
Preference number: 5 (lower is better)
Translates to: PVETALYLNTFTHWQASRNPSGS*EIGFTL
Trigger: CAGTGTAAACCCTATTTCCAAGCTCCCTGATGGATT...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCCTCAGTCCTTGGCTGTaGAGGGAACATGTAGTTGGT +
Preference number: 5 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVLSPWL*REHVVG
Trigger: ACCAACTACATGTTCCCTCAACAGCCAAGGACTGAG...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACATTCAAATGCAACTaGAGCCCGCTGTTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: IALPSVSGLKSRLTIALHTFKCN*SPLFPL
Trigger: CAGAGGAAACAGCGGGCTCAAGTTGCATTTGAATGT...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGATTGTGGGCCACTaGTGGGGCCTCTTATTATAT +
Preference number: 5 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVQIVGH*WGLLLY
Trigger: ATATAATAAGAGGCCCCACAAGTGGCCCACAATCTG...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATGCCACAAAGTGTCTTaGACTGCAGCACTGCTACTG +
Preference number: 5 (lower is better)
Translates to: KGIKAMREIALPSVSGLKCHKVS*TAALLL
Trigger: CAGTAGCAGTGCTGCAGTCAAAGACACTTTGTGGCA...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCTGGCTGCAGTAATTTaGATGCTGGTCCTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVLAAVI*MLVLQV
Trigger: AACCTGAAGGACCAGCATCAAAATTACTGCAGCCAG...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACCCAGTTTCACAAAGCTaGCTTTGGTTTCCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: IALPSVSGLKSRLTIALHPVSQS*LWFPSS
Trigger: GGAGCTAGGAAACCAAAGCAAGCTTTGTGAAACTGG...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAACAAGGACCCATCCCTTaGCTCTATAACTCTCCACAG +
Preference number: 5 (lower is better)
Translates to: KGIKAMREIALPSVSGLKQGPIP*LYNSPQ
Trigger: CTGTGGAGAGTTATAGAGCAAAGGGATGGGTCCTTG...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS TCA 90 bp TCTCTCTGGTATTTCATTAATAGAGGGTCGAGCACTCTGAGGTCTTaGTGCATTTGGACCATCTATGCTGTATGTTCGTGCAGAAAGGGG +
Preference number: 5 (lower is better)
Translates to: SLWYFINRGSSTLRS*CIWTIYAVCSCRKG
Trigger: CCCCTTTCTGCACGAACATACAGCATAGATGGTCCAAATGCATCAAGACCTCAGAGTGCTCGACCCTCTATTAATGAAATACCAGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
ENST00000511671.5
CDS CCA 90 bp AGTGTCTTTGACTGCAGCACTGCTACTGTATTGGATATTATACTGTaGAGGACCATATATTTGAGGTGCAGATTGTGGGCCACTTGTGGG +
Preference number: 5 (lower is better)
Translates to: SVFDCSTATVLDIIL*RTIYLRCRLWATCG
Trigger: CCCACAAGTGGCCCACAATCTGCACCTCAAATATATGGTCCTCCACAGTATAATATCCAATACAGTAGCAGTGCTGCAGTCAAAGACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS-3UTR CAA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACCCTTCATCAGTCACTTaGGATCCAGCTGAATATCTC +
Preference number: 5 (lower is better)
Translates to: IALPSVSGLKSRLTIALHPSSVT*DPAEYL
Trigger: GAGATATTCAGCTGGATCCAAAGTGACTGATGAAGG...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
CDS-3UTR CAA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGTGGATGCTGGTAACGTaGTTAAATCATTGTCTGGCA +
Preference number: 5 (lower is better)
Translates to: PVETALYLNTFTHWQASRWMLVT*LNHCLA
Trigger: TGCCAGACAATGATTTAACAACGTTACCAGCATCCA...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCCTGTATTCCATTCTaGCTGACATCCAGTTCCCTG +
Preference number: 5 (lower is better)
Translates to: KGIKAMREIALPSVSGLKSCIPF*LTSSSL
Trigger: CAGGGAACTGGATGTCAGCAAGAATGGAATACAGGA...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTCAGTCCTTGGCTGTaGAGGGAACATGTAGTTGGT +
Preference number: 5 (lower is better)
Translates to: IKAMREIALPSVSGLKSRLSPWL*REHVVG
Trigger: ACCAACTACATGTTCCCTCAACAGCCAAGGACTGAG...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCACATTCAAATGCAACTaGAGCCCGCTGTTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVTFKCN*SPLFPL
Trigger: CAGAGGAAACAGCGGGCTCAAGTTGCATTTGAATGT...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGTGGAGGACCATATATTaGAGGTGCAGATTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: IKAMREIALPSVSGLKSRWRTIY*RCRLWA
Trigger: GGCCCACAATCTGCACCTCAAATATATGGTCCTCCA...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTTGGAGGACCATATATTaGAGGTGCAGATTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: MREIALPSVSGLKSRLTIWRTIY*RCRLWA
Trigger: GGCCCACAATCTGCACCTCAAATATATGGTCCTCCA...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTACTGGCATGGTCTATTaGGGGATTTTGTTTGGAGTG +
Preference number: 5 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVTGMVY*GILFGV
Trigger: CACTCCAAACAAAATCCCCAAATAGACCATGCCAGT...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACTACTTTGTCGCTGGATaGTACTTCGAGTTACTGCAG +
Preference number: 5 (lower is better)
Translates to: IALPSVSGLKSRLTIALHYFVAG*YFELLQ
Trigger: CTGCAGTAACTCGAAGTACAATCCAGCGACAAAGTA...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTTACTTTGTCGCTGGATaGTACTTCGAGTTACTGCAG +
Preference number: 5 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVYFVAG*YFELLQ
Trigger: CTGCAGTAACTCGAAGTACAATCCAGCGACAAAGTA...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACGAGGTCTTGATGCATTaGGACCATCTATGCTGTATG +
Preference number: 5 (lower is better)
Translates to: IALPSVSGLKSRLTIALHEVLMH*DHLCCM
Trigger: CATACAGCATAGATGGTCCAAATGCATCAAGACCTC...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTGAGGTCTTGATGCATTaGGACCATCTATGCTGTATG +
Preference number: 5 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVEVLMH*DHLCCM
Trigger: CATACAGCATAGATGGTCCAAATGCATCAAGACCTC...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTAATATGTCGAAGTACTaGTTCTCTCCAGTCACGAGG +
Preference number: 5 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVNMSKY*FSPVTR
Trigger: CCTCGTGACTGGAGAGAACAAGTACTTCGACATATT...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCCTCACTCGAATCTCTaGTTTTGCCAGTTCATGGCC +
Preference number: 5 (lower is better)
Translates to: IKAMREIALPSVSGLKSRPHSNL*FCQFMA
Trigger: GGCCATGAACTGGCAAAACAAGAGATTCGAGTGAGG...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380938.6
ENST00000380943.6
CDS-3UTR CAA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTCCTCACTCGAATCTCTaGTTTTGCCAGTTCATGGCC +
Preference number: 5 (lower is better)
Translates to: MREIALPSVSGLKSRLTIPHSNL*FCQFMA
Trigger: GGCCATGAACTGGCAAAACAAGAGATTCGAGTGAGG...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380938.6
ENST00000380943.6
CDS-3UTR CAA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAACTGGCTGCAGTAATTTaGATGCTGGTCCTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: KGIKAMREIALPSVSGLKLAAVI*MLVLQV
Trigger: AACCTGAAGGACCAGCATCAAAATTACTGCAGCCAG...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCCTGGCTGCAGTAATTTaGATGCTGGTCCTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVLAAVI*MLVLQV
Trigger: AACCTGAAGGACCAGCATCAAAATTACTGCAGCCAG...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACAGGCTAACTATTGCCTaGCACACAGTTCAGTCATGT +
Preference number: 5 (lower is better)
Translates to: IALPSVSGLKSRLTIALHRLTIA*HTVQSC
Trigger: ACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCT...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGTCCTGTATTCCATTCTaGCTGACATCCAGTTCCCTG +
Preference number: 5 (lower is better)
Translates to: IKAMREIALPSVSGLKSRSCIPF*LTSSSL
Trigger: CAGGGAACTGGATGTCAGCAAGAATGGAATACAGGA...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAAAATCCATCAGGGAGCTaGGAAATAGGGTTTACACTG +
Preference number: 5 (lower is better)
Translates to: KGIKAMREIALPSVSGLKNPSGS*EIGFTL
Trigger: CAGTGTAAACCCTATTTCCAAGCTCCCTGATGGATT...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTCTCAGTCCTTGGCTGTaGAGGGAACATGTAGTTGGT +
Preference number: 5 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTLSPWL*REHVVG
Trigger: ACCAACTACATGTTCCCTCAACAGCCAAGGACTGAG...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGACATTCAAATGCAACTaGAGCCCGCTGTTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: IKAMREIALPSVSGLKSRTFKCN*SPLFPL
Trigger: CAGAGGAAACAGCGGGCTCAAGTTGCATTTGAATGT...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTAAATACCTGCAATGGTaGATCATACAACAGTGTGGC +
Preference number: 5 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVKYLQW*IIQQCG
Trigger: GCCACACTGTTGTATGATCAACCATTGCAGGTATTT...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTGGAGGACCATATATTaGAGGTGCAGATTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTWRTIY*RCRLWA
Trigger: GGCCCACAATCTGCACCTCAAATATATGGTCCTCCA...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTAGCACTGCTACTGTATaGGATATTATACTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVSTATV*DIILWR
Trigger: CCTCCACAGTATAATATCCAATACAGTAGCAGTGCT...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACGTCTATTTGGGGATTTaGTTTGGAGTGCCACAAAGT +
Preference number: 5 (lower is better)
Translates to: IALPSVSGLKSRLTIALHVYLGI*FGVPQS
Trigger: ACTTTGTGGCACTCCAAACAAAATCCCCAAATAGAC...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAAACTGGCATGGTCTATTaGGGGATTTTGTTTGGAGTG +
Preference number: 5 (lower is better)
Translates to: KGIKAMREIALPSVSGLKTGMVY*GILFGV
Trigger: CACTCCAAACAAAATCCCCAAATAGACCATGCCAGT...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTGGAGGACACACTACTTaGTCGCTGGATTGTACTTCG +
Preference number: 5 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTGGHTT*SLDCTS
Trigger: CGAAGTACAATCCAGCGACAAAGTAGTGTGTCCTCC...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCGTGATCCTGGCATCATaGGAGGAGTTCTTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSVILAS*EEFFPL
Trigger: CAGCGGGAAGAACTCCTCCAATGATGCCAGGATCAC...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAAGCTCAGAACCAACCCTaGCATTTGGTCTTTTTGAAG +
Preference number: 5 (lower is better)
Translates to: KGIKAMREIALPSVSGLKAQNQP*HLVFLK
Trigger: CTTCAAAAAGACCAAATGCAAGGGTTGGTTCTGAGC...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTGTTTTAGTCTGGCCTaGGAAAGTGAACCCACCAGC +
Preference number: 5 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTCFSLA*ESEPTS
Trigger: GCTGGTGGGTTCACTTTCCAAGGCCAGACTAAAACA...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACGAAACAGCCCTTTATTaGAACACCTTTACACACTGG +
Preference number: 5 (lower is better)
Translates to: IALPSVSGLKSRLTIALHETALY*NTFTHW
Trigger: CCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTC...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp ACCCTTCCAAATAGATTTCACACGTCAATCTCCATCAGAGAAACATTTCCCATCACCCAAAGGTCTGAGTaGGCTGCCTGTCTAGATTAC +
Preference number: 5 (lower is better)
Translates to: TLPNRFHTSISIRETFPITQRSE*AACLDY
Trigger: GTAATCTAGACAGGCAGCCAACTCAGACCTTTGGGT...GATGGGAAATGTTTCTCTGATGGAGATTGACGTGTGAAATCTATTTGGAAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS TCA 90 bp CATGGTCTATTTGGGGATTTTGTTTGGAGTGCCACAAAGTGTCTTTaGCTGCAGCACTGCTACTGTATTGGATATTATACTGTGGAGGAC +
Preference number: 5 (lower is better)
Translates to: HGLFGDFVWSATKCL*LQHCYCIGYYTVED
Trigger: GTCCTCCACAGTATAATATCCAATACAGTAGCAGTGCTGCAGTCAAAGACACTTTGTGGCACTCCAAACAAAATCCCCAAATAGACCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS TCA 90 bp GACATAGTTCTCTCTGGTATTTCATTAATAGAGGGTCGAGCACTCTaGGGTCTTGATGCATTTGGACCATCTATGCTGTATGTTCGTGCA +
Preference number: 5 (lower is better)
Translates to: DIVLSGISLIEGRAL*GLDAFGPSMLYVRA
Trigger: TGCACGAACATACAGCATAGATGGTCCAAATGCATCAAGACCTCAGAGTGCTCGACCCTCTATTAATGAAATACCAGAGAGAACTATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
ENST00000511671.5
CDS CCA 90 bp ACTGTGGAGGACCATATATTTGAGGTGCAGATTGTGGGCCACTTGTaGGGCCTCTTATTATATTTGGCTCTTCGGGATTATGATTTGAAT +
Preference number: 5 (lower is better)
Translates to: TVEDHIFEVQIVGHL*GLLLYLALRDYDLN
Trigger: ATTCAAATCATAATCCCGAAGAGCCAAATATAATAAGAGGCCCCACAAGTGGCCCACAATCTGCACCTCAAATATATGGTCCTCCACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS-3UTR CAA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGAACGTTGTTAAATCATaGTCTGGCAAACTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: PVETALYLNTFTHWQASRNVVKS*SGKLSL
Trigger: CAAACTGAGTTTGCCAGACAATGATTTAACAACGTT...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGAATCCATCAGGGAGCTaGGAAATAGGGTTTACACTG +
Preference number: 5 (lower is better)
Translates to: IKAMREIALPSVSGLKSRNPSGS*EIGFTL
Trigger: CAGTGTAAACCCTATTTCCAAGCTCCCTGATGGATT...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACAGTGTCTCAAGTTTATaGGAATGGAGAAACAGCACA +
Preference number: 5 (lower is better)
Translates to: IALPSVSGLKSRLTIALHSVSSL*EWRNST
Trigger: TGTGCTGTTTCTCCATTCCAATAAACTTGAGACACT...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTACATTCAAATGCAACTaGAGCCCGCTGTTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTTFKCN*SPLFPL
Trigger: CAGAGGAAACAGCGGGCTCAAGTTGCATTTGAATGT...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCAGCACTGCTACTGTATaGGATATTATACTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVSTATV*DIILWR
Trigger: CCTCCACAGTATAATATCCAATACAGTAGCAGTGCT...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAAATTTGGGGATTTTGTTaGGAGTGCCACAAAGTGTCT +
Preference number: 5 (lower is better)
Translates to: KGIKAMREIALPSVSGLKIWGFC*ECHKVS
Trigger: AGACACTTTGTGGCACTCCAAACAAAATCCCCAAAT...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATTTGGGGATTTTGTTaGGAGTGCCACAAAGTGTCT +
Preference number: 5 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVIWGFC*ECHKVS
Trigger: AGACACTTTGTGGCACTCCAAACAAAATCCCCAAAT...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGACTGGCATGGTCTATTaGGGGATTTTGTTTGGAGTG +
Preference number: 5 (lower is better)
Translates to: IKAMREIALPSVSGLKSRTGMVY*GILFGV
Trigger: CACTCCAAACAAAATCCCCAAATAGACCATGCCAGT...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCTCAGAACCAACCCTaGCATTTGGTCTTTTTGAAG +
Preference number: 5 (lower is better)
Translates to: MREIALPSVSGLKSRLTIAQNQP*HLVFLK
Trigger: CTTCAAAAAGACCAAATGCAAGGGTTGGTTCTGAGC...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGGCTCAGAACCAACCCTaGCATTTGGTCTTTTTGAAG +
Preference number: 5 (lower is better)
Translates to: IKAMREIALPSVSGLKSRAQNQP*HLVFLK
Trigger: CTTCAAAAAGACCAAATGCAAGGGTTGGTTCTGAGC...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTAATATGTCGAAGTACTaGTTCTCTCCAGTCACGAGG +
Preference number: 5 (lower is better)
Translates to: MREIALPSVSGLKSRLTINMSKY*FSPVTR
Trigger: CCTCGTGACTGGAGAGAACAAGTACTTCGACATATT...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCTGCCAGTTCATGGCCTaGTCTAGGAGAACAATGGGG +
Preference number: 5 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSCQFMA*SRRTMG
Trigger: CCCCATTGTTCTCCTAGACAAGGCCATGAACTGGCA...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380938.6
ENST00000380943.6
CDS-3UTR CAA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTGCCAGTTCATGGCCTaGTCTAGGAGAACAATGGGG +
Preference number: 5 (lower is better)
Translates to: NINFPCKYLPINLAVFPACQFMA*SRRTMG
Trigger: CCCCATTGTTCTCCTAGACAAGGCCATGAACTGGCA...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284037.10
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
CDS-3UTR CAA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTAGGCTAACTATTGCCTaGCACACAGTTCAGTCATGT +
Preference number: 5 (lower is better)
Translates to: MREIALPSVSGLKSRLTIRLTIA*HTVQSC
Trigger: ACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCT...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp CCTGTAGAAACAGCCCTTTATTTGAACACCTTTACACACTGGCAGGCCTCAAGGAACCTTCGTAACATTTaGTGTTACAGGCAACACAAT +
Preference number: 5 (lower is better)
Translates to: PVETALYLNTFTHWQASRNLRNI*CYRQHN
Trigger: ATTGTGTTGCCTGTAACACAAAATGTTACGAAGGTT...CCTTGAGGCCTGCCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTCTACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAAGAAACAGCCCTTTATTaGAACACCTTTACACACTGG +
Preference number: 5 (lower is better)
Translates to: KGIKAMREIALPSVSGLKETALY*NTFTHW
Trigger: CCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTC...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTCGTGACAGATCACCATaGTCCCTGGTTGTTACATTA +
Preference number: 5 (lower is better)
Translates to: MREIALPSVSGLKSRLTIRDRSP*SLVVTL
Trigger: TAATGTAACAACCAGGGACAATGGTGATCTGTCACG...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS TCA 90 bp GCACTGCTACTGTATTGGATATTATACTGTGGAGGACCATATATTTaGGGTGCAGATTGTGGGCCACTTGTGGGGCCTCTTATTATATTT +
Preference number: 5 (lower is better)
Translates to: ALLLYWILYCGGPYI*GADCGPLVGPLIIF
Trigger: AAATATAATAAGAGGCCCCACAAGTGGCCCACAATCTGCACCTCAAATATATGGTCCTCCACAGTATAATATCCAATACAGTAGCAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS GCA 90 bp GTCTATTTGGGGATTTTGTTTGGAGTGCCACAAAGTGTCTTTGACTaGAGCACTGCTACTGTATTGGATATTATACTGTGGAGGACCATA +
Preference number: 5 (lower is better)
Translates to: VYLGILFGVPQSVFD*STATVLDIILWRTI
Trigger: TATGGTCCTCCACAGTATAATATCCAATACAGTAGCAGTGCTGCAGTCAAAGACACTTTGTGGCACTCCAAACAAAATCCCCAAATAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS-3UTR CAA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTCCTTCATCAGTCACTTaGGATCCAGCTGAATATCTC +
Preference number: 5 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTPSSVT*DPAEYL
Trigger: GAGATATTCAGCTGGATCCAAAGTGACTGATGAAGG...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACAACGTTGTTAAATCATaGTCTGGCAAACTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: IALPSVSGLKSRLTIALHNVVKS*SGKLSL
Trigger: CAAACTGAGTTTGCCAGACAATGATTTAACAACGTT...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTTGGATGCTGGTAACGTaGTTAAATCATTGTCTGGCA +
Preference number: 5 (lower is better)
Translates to: MREIALPSVSGLKSRLTIWMLVT*LNHCLA
Trigger: TGCCAGACAATGATTTAACAACGTTACCAGCATCCA...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTTTAATCTGCCAAAATTaGCTGGCAAGAACTCAAGAA +
Preference number: 5 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVLICQN*LARTQE
Trigger: TTCTTGAGTTCTTGCCAGCAAATTTTGGCAGATTAA...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAAGCTGAAGTGAATTGCTaGATAATAGGAGGTCTTGAA +
Preference number: 5 (lower is better)
Translates to: KGIKAMREIALPSVSGLKAEVNC*IIGGLE
Trigger: TTCAAGACCTCCTATTATCAAGCAATTCACTTCAGC...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp GGTTTGCTGAAGATCCATTGTTCCGTGAGGCTTAATTCCTTTTCCAAAATTATACTCAGTCCTTGGCTGTaGAGGGAACATGTAGTTGGT +
Preference number: 5 (lower is better)
Translates to: GLLKIHCSVRLNSFSKIILSPWL*REHVVG
Trigger: ACCAACTACATGTTCCCTCAACAGCCAAGGACTGAG...TATAATTTTGGAAAAGGAATTAAGCCTCACGGAACAATGGATCTTCAGCAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR CAA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACCTTCCTGAGTCTTCATaGGTCTCTTCATCTTTTAAT +
Preference number: 5 (lower is better)
Translates to: IALPSVSGLKSRLTIALHLPESS*VSSSFN
Trigger: ATTAAAAGATGAAGAGACCAATGAAGACTCAGGAAG...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACTCCAAATTAGGATACTaGTTTCCATTTTCCAAGTGC +
Preference number: 5 (lower is better)
Translates to: IALPSVSGLKSRLTIALHSKLGY*FPFSKC
Trigger: GCACTTGGAAAATGGAAACAAGTATCCTAATTTGGA...GTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp CTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTAGATCTTCAGTGCTTTaGGAAATACCTAAGTCAACA +
Preference number: 5 (lower is better)
Translates to: LPSVSGLKSRLTIALHTVRSSVL*EIPKST
Trigger: TGTTGACTTAGGTATTTCCAAAAGCACTGAAGATCT...AACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGAAATACCTGCAATGGTaGATCATACAACAGTGTGGC +
Preference number: 5 (lower is better)
Translates to: IKAMREIALPSVSGLKSRKYLQW*IIQQCG
Trigger: GCCACACTGTTGTATGATCAACCATTGCAGGTATTT...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTAAATACCTGCAATGGTaGATCATACAACAGTGTGGC +
Preference number: 5 (lower is better)
Translates to: MREIALPSVSGLKSRLTIKYLQW*IIQQCG
Trigger: GCCACACTGTTGTATGATCAACCATTGCAGGTATTT...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAAGGCCTCTTATTATATTaGGCTCTTCGGGATTATGAT +
Preference number: 5 (lower is better)
Translates to: KGIKAMREIALPSVSGLKGLLLY*ALRDYD
Trigger: ATCATAATCCCGAAGAGCCAAATATAATAAGAGGCC...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCGGCCTCTTATTATATTaGGCTCTTCGGGATTATGAT +
Preference number: 5 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVGLLLY*ALRDYD
Trigger: ATCATAATCCCGAAGAGCCAAATATAATAAGAGGCC...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp GGTTTGCTGAAGATCCATTGTTCCGTGAGGCTTAATTCCTTTTCCAAAATTATATGCCACAAAGTGTCTTaGACTGCAGCACTGCTACTG +
Preference number: 5 (lower is better)
Translates to: GLLKIHCSVRLNSFSKIICHKVS*TAALLL
Trigger: CAGTAGCAGTGCTGCAGTCAAAGACACTTTGTGGCA...TATAATTTTGGAAAAGGAATTAAGCCTCACGGAACAATGGATCTTCAGCAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR CAA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCTGCCACAAAGTGTCTTaGACTGCAGCACTGCTACTG +
Preference number: 5 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSCHKVS*TAALLL
Trigger: CAGTAGCAGTGCTGCAGTCAAAGACACTTTGTGGCA...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp TACACTGATACACATAGAAACCCTTTAAAGACTCTGGAAGTGTTGAGTTCACATTGCCACAAAGTGTCTTaGACTGCAGCACTGCTACTG +
Preference number: 5 (lower is better)
Translates to: YTDTHRNPLKTLEVLSSHCHKVS*TAALLL
Trigger: CAGTAGCAGTGCTGCAGTCAAAGACACTTTGTGGCA...ATGTGAACTCAACACTTCCAGAGTCTTTAAAGGGTTTCTATGTGTATCAGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTATTTGGGGATTTTGTTaGGAGTGCCACAAAGTGTCT +
Preference number: 5 (lower is better)
Translates to: MREIALPSVSGLKSRLTIIWGFC*ECHKVS
Trigger: AGACACTTTGTGGCACTCCAAACAAAATCCCCAAAT...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTACTGGCATGGTCTATTaGGGGATTTTGTTTGGAGTG +
Preference number: 5 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTTGMVY*GILFGV
Trigger: CACTCCAAACAAAATCCCCAAATAGACCATGCCAGT...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp GGTTTGCTGAAGATCCATTGTTCCGTGAGGCTTAATTCCTTTTCCAAAATTATAACATTTCCCCATGTCTaGCTGGGCCAAGTCTCTGAT +
Preference number: 5 (lower is better)
Translates to: GLLKIHCSVRLNSFSKIITFPHV*LGQVSD
Trigger: ATCAGAGACTTGGCCCAGCAAGACATGGGGAAATGT...TATAATTTTGGAAAAGGAATTAAGCCTCACGGAACAATGGATCTTCAGCAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR CAA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTACATTTCCCCATGTCTaGCTGGGCCAAGTCTCTGAT +
Preference number: 5 (lower is better)
Translates to: INFPCKYLPINLAVFPAFTFPHV*LGQVSD
Trigger: ATCAGAGACTTGGCCCAGCAAGACATGGGGAAATGT...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTACTTTGTCGCTGGATaGTACTTCGAGTTACTGCAG +
Preference number: 5 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTYFVAG*YFELLQ
Trigger: CTGCAGTAACTCGAAGTACAATCCAGCGACAAAGTA...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp AAATCAGTGGATTTCCATAACACAGAAAATGCATGGACATGCATCTACAGTAGAGGAGGACACACTACTTaGTCGCTGGATTGTACTTCG +
Preference number: 5 (lower is better)
Translates to: KSVDFHNTENAWTCIYSRGGHTT*SLDCTS
Trigger: CGAAGTACAATCCAGCGACAAAGTAGTGTGTCCTCC...TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATGGAAATCCACTGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTGGAGGACACACTACTTaGTCGCTGGATTGTACTTCG +
Preference number: 5 (lower is better)
Translates to: NINFPCKYLPINLAVFPAGGHTT*SLDCTS
Trigger: CGAAGTACAATCCAGCGACAAAGTAGTGTGTCCTCC...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTGCTCAGAACCAACCCTaGCATTTGGTCTTTTTGAAG +
Preference number: 5 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTAQNQP*HLVFLK
Trigger: CTTCAAAAAGACCAAATGCAAGGGTTGGTTCTGAGC...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp ACCCTTCCAAATAGATTTCACACGTCAATCTCCATCAGAGAAACATTTCCCATCAATATGTCGAAGTACTaGTTCTCTCCAGTCACGAGG +
Preference number: 5 (lower is better)
Translates to: TLPNRFHTSISIRETFPINMSKY*FSPVTR
Trigger: CCTCGTGACTGGAGAGAACAAGTACTTCGACATATT...GATGGGAAATGTTTCTCTGATGGAGATTGACGTGTGAAATCTATTTGGAAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR CAA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTAATATGTCGAAGTACTaGTTCTCTCCAGTCACGAGG +
Preference number: 5 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTNMSKY*FSPVTR
Trigger: CCTCGTGACTGGAGAGAACAAGTACTTCGACATATT...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTCCTCACTCGAATCTCTaGTTTTGCCAGTTCATGGCC +
Preference number: 5 (lower is better)
Translates to: INFPCKYLPINLAVFPAFPHSNL*FCQFMA
Trigger: GGCCATGAACTGGCAAAACAAGAGATTCGAGTGAGG...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000284037.10
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
CDS-3UTR CAA 90 bp TACACTGATACACATAGAAACCCTTTAAAGACTCTGGAAGTGTTGAGTTCACATCAAGGACCCATCCCTTaGCTCTATAACTCTCCACAG +
Preference number: 5 (lower is better)
Translates to: YTDTHRNPLKTLEVLSSHQGPIP*LYNSPQ
Trigger: CTGTGGAGAGTTATAGAGCAAAGGGATGGGTCCTTG...ATGTGAACTCAACACTTCCAGAGTCTTTAAAGGGTTTCTATGTGTATCAGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTCAAGGACCCATCCCTTaGCTCTATAACTCTCCACAG +
Preference number: 5 (lower is better)
Translates to: NINFPCKYLPINLAVFPAQGPIP*LYNSPQ
Trigger: CTGTGGAGAGTTATAGAGCAAAGGGATGGGTCCTTG...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTACAGAAGGATTCTTTTaGTCAGCCTCTCTCCTAAAG +
Preference number: 5 (lower is better)
Translates to: MREIALPSVSGLKSRLTITEGFF*SASLLK
Trigger: CTTTAGGAGAGAGGCTGACAAAAAGAATCCTTCTGT...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS GCA 90 bp CAGTCACGAGGAACTTTACTTTTTCCTGGAGGATCTAATAAAGAATaGTCAGAACCAACCCTTGCATTTGGTCTTTTTGAAGGACTAGTC +
Preference number: 5 (lower is better)
Translates to: QSRGTLLFPGGSNKE*SEPTLAFGLFEGLV
Trigger: GACTAGTCCTTCAAAAAGACCAAATGCAAGGGTTGGTTCTGAGCATTCTTTATTAGATCCTCCAGGAAAAAGTAAAGTTCCTCGTGACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
ENST00000511671.5
CDS CCA 90 bp GGCACTTCCGTGAATTCGTTACTTCCCAAATCCAGTCTTTCCAGCTaGGTCAGTCTATTCATAGTTTTAGGCAACATTTTTAACTGGTTT +
Preference number: 5 (lower is better)
Translates to: GTSVNSLLPKSSLSS*VSLFIVLGNIFNWF
Trigger: AAACCAGTTAAAAATGTTGCCTAAAACTATGAATAGACTGACCCAGCTGGAAAGACTGGATTTGGGAAGTAACGAATTCACGGAAGTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS CCA 90 bp TCAACAGAACAATCACTGTCATGTGGTTCAGTCCTATTAGGAGACTaGGAAGTTTCCTCAGAATGTCCATTTACCTTATTTACGGATTCC +
Preference number: 5 (lower is better)
Translates to: STEQSLSCGSVLLGD*EVSSECPFTLFTDS
Trigger: GGAATCCGTAAATAAGGTAAATGGACATTCTGAGGAAACTTCCCAGTCTCCTAATAGGACTGAACCACATGACAGTGATTGTTCTGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS-3UTR CAA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCAACGTTGTTAAATCATaGTCTGGCAAACTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVNVVKS*SGKLSL
Trigger: CAAACTGAGTTTGCCAGACAATGATTTAACAACGTT...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCTCCTGTATTCCATTCTaGCTGACATCCAGTTCCCTG +
Preference number: 5 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSSCIPF*LTSSSL
Trigger: CAGGGAACTGGATGTCAGCAAGAATGGAATACAGGA...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTTCCTGTATTCCATTCTaGCTGACATCCAGTTCCCTG +
Preference number: 5 (lower is better)
Translates to: INFPCKYLPINLAVFPAFSCIPF*LTSSSL
Trigger: CAGGGAACTGGATGTCAGCAAGAATGGAATACAGGA...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR CAA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAACACTGGCCTCCACAATaGTCAAAACTTTACAATTTT +
Preference number: 5 (lower is better)
Translates to: KGIKAMREIALPSVSGLKHWPPQ*SKLYNF
Trigger: AAAATTGTAAAGTTTTGACAATTGTGGAGGCCAGTG...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCCACTGGCCTCCACAATaGTCAAAACTTTACAATTTT +
Preference number: 5 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVHWPPQ*SKLYNF
Trigger: AAAATTGTAAAGTTTTGACAATTGTGGAGGCCAGTG...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp AAGGGCATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCCAAATTAGGATACTaGTTTCCATTTTCCAAGTGC +
Preference number: 5 (lower is better)
Translates to: KGIKAMREIALPSVSGLKSKLGY*FPFSKC
Trigger: GCACTTGGAAAATGGAAACAAGTATCCTAATTTGGA...TTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTATGCCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp TACACTGATACACATAGAAACCCTTTAAAGACTCTGGAAGTGTTGAGTTCACATCAGATTGTGGGCCACTaGTGGGGCCTCTTATTATAT +
Preference number: 5 (lower is better)
Translates to: YTDTHRNPLKTLEVLSSHQIVGH*WGLLLY
Trigger: ATATAATAAGAGGCCCCACAAGTGGCCCACAATCTG...ATGTGAACTCAACACTTCCAGAGTCTTTAAAGGGTTTCTATGTGTATCAGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTCAGATTGTGGGCCACTaGTGGGGCCTCTTATTATAT +
Preference number: 5 (lower is better)
Translates to: NINFPCKYLPINLAVFPAQIVGH*WGLLLY
Trigger: ATATAATAAGAGGCCCCACAAGTGGCCCACAATCTG...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp AAATCAGTGGATTTCCATAACACAGAAAATGCATGGACATGCATCTACAGTAGACAGATTGTGGGCCACTaGTGGGGCCTCTTATTATAT +
Preference number: 5 (lower is better)
Translates to: KSVDFHNTENAWTCIYSRQIVGH*WGLLLY
Trigger: ATATAATAAGAGGCCCCACAAGTGGCCCACAATCTG...TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATGGAAATCCACTGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp AAGAATAAAGGGAACACCGAGACTTGTCTTAAAGAAGCTGTTTGTCATTCTTTTTGGAGGACCATATATTaGAGGTGCAGATTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: KNKGNTETCLKEAVCHSFWRTIY*RCRLWA
Trigger: GGCCCACAATCTGCACCTCAAATATATGGTCCTCCA...AAAAGAATGACAAACAGCTTCTTTAAGACAAGTCTCGGTGTTCCCTTTATTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR CAA 90 bp CATAACACAGAAAATGCATGGACATGCATCTACAGTAGAGTTAAAAATTTCCTGTGGAGGACCATATATTaGAGGTGCAGATTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: HNTENAWTCIYSRVKNFLWRTIY*RCRLWA
Trigger: GGCCCACAATCTGCACCTCAAATATATGGTCCTCCA...CAGGAAATTTTTAACTCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp AAGAATAAAGGGAACACCGAGACTTGTCTTAAAGAAGCTGTTTGTCATTCTTTTTGCCACAAAGTGTCTTaGACTGCAGCACTGCTACTG +
Preference number: 5 (lower is better)
Translates to: KNKGNTETCLKEAVCHSFCHKVS*TAALLL
Trigger: CAGTAGCAGTGCTGCAGTCAAAGACACTTTGTGGCA...AAAAGAATGACAAACAGCTTCTTTAAGACAAGTCTCGGTGTTCCCTTTATTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR CAA 90 bp CATAACACAGAAAATGCATGGACATGCATCTACAGTAGAGTTAAAAATTTCCTGACATTTCCCCATGTCTaGCTGGGCCAAGTCTCTGAT +
Preference number: 5 (lower is better)
Translates to: HNTENAWTCIYSRVKNFLTFPHV*LGQVSD
Trigger: ATCAGAGACTTGGCCCAGCAAGACATGGGGAAATGT...CAGGAAATTTTTAACTCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp CATAACACAGAAAATGCATGGACATGCATCTACAGTAGAGTTAAAAATTTCCTGGGAGGACACACTACTTaGTCGCTGGATTGTACTTCG +
Preference number: 5 (lower is better)
Translates to: HNTENAWTCIYSRVKNFLGGHTT*SLDCTS
Trigger: CGAAGTACAATCCAGCGACAAAGTAGTGTGTCCTCC...CAGGAAATTTTTAACTCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp AAATCAGTGGATTTCCATAACACAGAAAATGCATGGACATGCATCTACAGTAGACTCGAATCTCTTGTTTaGCCAGTTCATGGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: KSVDFHNTENAWTCIYSRLESLV*PVHGLV
Trigger: GACAAGGCCATGAACTGGCAAAACAAGAGATTCGAG...TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATGGAAATCCACTGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380943.6
CDS-3UTR CAA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTCTCGAATCTCTTGTTTaGCCAGTTCATGGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: NINFPCKYLPINLAVFPALESLV*PVHGLV
Trigger: GACAAGGCCATGAACTGGCAAAACAAGAGATTCGAG...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000284037.10
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
CDS-3UTR CAA 90 bp TACACTGATACACATAGAAACCCTTTAAAGACTCTGGAAGTGTTGAGTTCACATCTCGAATCTCTTGTTTaGCCAGTTCATGGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: YTDTHRNPLKTLEVLSSHLESLV*PVHGLV
Trigger: GACAAGGCCATGAACTGGCAAAACAAGAGATTCGAG...ATGTGAACTCAACACTTCCAGAGTCTTTAAAGGGTTTCTATGTGTATCAGTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380943.6
CDS-3UTR CAA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTCTCGAATCTCTTGTTTaGCCAGTTCATGGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: INFPCKYLPINLAVFPAFLESLV*PVHGLV
Trigger: GACAAGGCCATGAACTGGCAAAACAAGAGATTCGAG...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000284037.10
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
CDS-3UTR CAA 90 bp ATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCCTTCAGGTTGTACCCTaGTTACAAATATACCATCAT +
Preference number: 5 (lower is better)
Translates to: ICLWAKIKANYCLAHSSVLQVVP*LQIYHH
Trigger: ATGATGGTATATTTGTAACAAGGGTACAACCTGAAG...GACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTTAGCCCAGAGACAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTCTGGCTGCAGTAATTTaGATGCTGGTCCTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: INFPCKYLPINLAVFPAFLAAVI*MLVLQV
Trigger: AACCTGAAGGACCAGCATCAAAATTACTGCAGCCAG...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR CAA 90 bp AAGAATAAAGGGAACACCGAGACTTGTCTTAAAGAAGCTGTTTGTCATTCTTTTTGTTTTAGTCTGGCCTaGGAAAGTGAACCCACCAGC +
Preference number: 5 (lower is better)
Translates to: KNKGNTETCLKEAVCHSFCFSLA*ESEPTS
Trigger: GCTGGTGGGTTCACTTTCCAAGGCCAGACTAAAACA...AAAAGAATGACAAACAGCTTCTTTAAGACAAGTCTCGGTGTTCCCTTTATTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR CAA 90 bp TACACTGATACACATAGAAACCCTTTAAAGACTCTGGAAGTGTTGAGTTCACATCCAGTTTCACAAAGCTaGCTTTGGTTTCCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: YTDTHRNPLKTLEVLSSHPVSQS*LWFPSS
Trigger: GGAGCTAGGAAACCAAAGCAAGCTTTGTGAAACTGG...ATGTGAACTCAACACTTCCAGAGTCTTTAAAGGGTTTCTATGTGTATCAGTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTGAGCTTCTCAGGTGGTaGGATATTAGGACTGTACGT +
Preference number: 5 (lower is better)
Translates to: NINFPCKYLPINLAVFPAELLRW*DIRTVR
Trigger: ACGTACAGTCCTAATATCCAACCACCTGAGAAGCTC...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR CAA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTCCTTCATCAGTCACTTaGGATCCAGCTGAATATCTC +
Preference number: 5 (lower is better)
Translates to: NINFPCKYLPINLAVFPAPSSVT*DPAEYL
Trigger: GAGATATTCAGCTGGATCCAAAGTGACTGATGAAGG...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
CDS-3UTR CAA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTCCTTCATCAGTCACTTaGGATCCAGCTGAATATCTC +
Preference number: 5 (lower is better)
Translates to: INFPCKYLPINLAVFPAFPSSVT*DPAEYL
Trigger: GAGATATTCAGCTGGATCCAAAGTGACTGATGAAGG...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
CDS-3UTR CAA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTCACTGGCCTCCACAATaGTCAAAACTTTACAATTTT +
Preference number: 5 (lower is better)
Translates to: MREIALPSVSGLKSRLTIHWPPQ*SKLYNF
Trigger: AAAATTGTAAAGTTTTGACAATTGTGGAGGCCAGTG...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp CTTCCAAATAGATTTCACACGTCAATCTCCATCAGAGAAACATTTCCCATCTTAAATCCATCAGGGAGCTaGGAAATAGGGTTTACACTG +
Preference number: 5 (lower is better)
Translates to: LPNRFHTSISIRETFPILNPSGS*EIGFTL
Trigger: CAGTGTAAACCCTATTTCCAAGCTCCCTGATGGATT...TAAGATGGGAAATGTTTCTCTGATGGAGATTGACGTGTGAAATCTATTTGGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR CAA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTAATCCATCAGGGAGCTaGGAAATAGGGTTTACACTG +
Preference number: 5 (lower is better)
Translates to: NINFPCKYLPINLAVFPANPSGS*EIGFTL
Trigger: CAGTGTAAACCCTATTTCCAAGCTCCCTGATGGATT...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTAATCCATCAGGGAGCTaGGAAATAGGGTTTACACTG +
Preference number: 5 (lower is better)
Translates to: INFPCKYLPINLAVFPAFNPSGS*EIGFTL
Trigger: CAGTGTAAACCCTATTTCCAAGCTCCCTGATGGATT...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTAACTATTTTAATCTGCCAAAATTaGCTGGCAAGAACTCAAGAA +
Preference number: 5 (lower is better)
Translates to: MREIALPSVSGLKSRLTILICQN*LARTQE
Trigger: TTCTTGAGTTCTTGCCAGCAAATTTTGGCAGATTAA...AATAGTTAGCCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTGCTGAAGTGAATTGCTaGATAATAGGAGGTCTTGAA +
Preference number: 5 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTAEVNC*IIGGLE
Trigger: TTCAAGACCTCCTATTATCAAGCAATTCACTTCAGC...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGCTTCCTGAGTCTTCATaGGTCTCTTCATCTTTTAAT +
Preference number: 5 (lower is better)
Translates to: IKAMREIALPSVSGLKSRLPESS*VSSSFN
Trigger: ATTAAAAGATGAAGAGACCAATGAAGACTCAGGAAG...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTCATCAGCTGTGGCTGTaGAGTCAACACTTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: NINFPCKYLPINLAVFPAHQLWL*SQHFSQ
Trigger: TTGAGAAAAGTGTTGACTCAACAGCCACAGCTGATG...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGTCCAAATTAGGATACTaGTTTCCATTTTCCAAGTGC +
Preference number: 5 (lower is better)
Translates to: IKAMREIALPSVSGLKSRSKLGY*FPFSKC
Trigger: GCACTTGGAAAATGGAAACAAGTATCCTAATTTGGA...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGAGATCTTCAGTGCTTTaGGAAATACCTAAGTCAACA +
Preference number: 5 (lower is better)
Translates to: IKAMREIALPSVSGLKSRRSSVL*EIPKST
Trigger: TGTTGACTTAGGTATTTCCAAAAGCACTGAAGATCT...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp GAAAGTTGTAACAGAAGGATTCTTTTTGTCAGCCTCTCTCCTAAAGATTCTATACAGATTGTGGGCCACTaGTGGGGCCTCTTATTATAT +
Preference number: 5 (lower is better)
Translates to: ESCNRRILFVSLSPKDSIQIVGH*WGLLLY
Trigger: ATATAATAAGAGGCCCCACAAGTGGCCCACAATCTG...TATAGAATCTTTAGGAGAGAGGCTGACAAAAAGAATCCTTCTGTTACAACTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR CAA 90 bp TACACTGATACACATAGAAACCCTTTAAAGACTCTGGAAGTGTTGAGTTCACATTACTTTGTCGCTGGATaGTACTTCGAGTTACTGCAG +
Preference number: 5 (lower is better)
Translates to: YTDTHRNPLKTLEVLSSHYFVAG*YFELLQ
Trigger: CTGCAGTAACTCGAAGTACAATCCAGCGACAAAGTA...ATGTGAACTCAACACTTCCAGAGTCTTTAAAGGGTTTCTATGTGTATCAGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp AAATCAGTGGATTTCCATAACACAGAAAATGCATGGACATGCATCTACAGTAGAGAGGTCTTGATGCATTaGGACCATCTATGCTGTATG +
Preference number: 5 (lower is better)
Translates to: KSVDFHNTENAWTCIYSREVLMH*DHLCCM
Trigger: CATACAGCATAGATGGTCCAAATGCATCAAGACCTC...TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATGGAAATCCACTGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCGCTCAGAACCAACCCTaGCATTTGGTCTTTTTGAAG +
Preference number: 5 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSAQNQP*HLVFLK
Trigger: CTTCAAAAAGACCAAATGCAAGGGTTGGTTCTGAGC...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp TACACTGATACACATAGAAACCCTTTAAAGACTCTGGAAGTGTTGAGTTCACATAATATGTCGAAGTACTaGTTCTCTCCAGTCACGAGG +
Preference number: 5 (lower is better)
Translates to: YTDTHRNPLKTLEVLSSHNMSKY*FSPVTR
Trigger: CCTCGTGACTGGAGAGAACAAGTACTTCGACATATT...ATGTGAACTCAACACTTCCAGAGTCTTTAAAGGGTTTCTATGTGTATCAGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTAGGCTAACTATTGCCTaGCACACAGTTCAGTCATGT +
Preference number: 5 (lower is better)
Translates to: NINFPCKYLPINLAVFPARLTIA*HTVQSC
Trigger: ACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCT...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCAGGCTAACTATTGCCTaGCACACAGTTCAGTCATGT +
Preference number: 5 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSRLTIA*HTVQSC
Trigger: ACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCT...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATAAAAGCTATGAGAGAGATAGCTCTGCCATCTGTCTCTGGGCTAAAATCAAGGGCTATAATACTCCTCTaGGTAAAGTTTCTTACGCAA +
Preference number: 5 (lower is better)
Translates to: IKAMREIALPSVSGLKSRAIILL*VKFLTQ
Trigger: TTGCGTAAGAAACTTTACCAAGAGGAGTATTATAGC...CCTTGATTTTAGCCCAGAGACAGATGGCAGAGCTATCTCTCTCATAGCTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS TCA 90 bp ACAGAGTACCAAGGAGCAATTTTTCCTCCACACCATGCAAATATTTaGATCATGGTACAAGTTTTCTCCCTGACTTCTCTGAGTAATACT +
Preference number: 5 (lower is better)
Translates to: TEYQGAIFPPHHANI*IMVQVFSLTSLSNT
Trigger: AGTATTACTCAGAGAAGTCAGGGAGAAAACTTGTACCATGATTCAAATATTTGCATGGTGTGGAGGAAAAATTGCTCCTTGGTACTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506744.1
CDS-3UTR CAA 90 bp AAATCAGTGGATTTCCATAACACAGAAAATGCATGGACATGCATCTACAGTAGATGGATGCTGGTAACGTaGTTAAATCATTGTCTGGCA +
Preference number: 5 (lower is better)
Translates to: KSVDFHNTENAWTCIYSRWMLVT*LNHCLA
Trigger: TGCCAGACAATGATTTAACAACGTTACCAGCATCCA...TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATGGAAATCCACTGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTTGGATGCTGGTAACGTaGTTAAATCATTGTCTGGCA +
Preference number: 5 (lower is better)
Translates to: INFPCKYLPINLAVFPAFWMLVT*LNHCLA
Trigger: TGCCAGACAATGATTTAACAACGTTACCAGCATCCA...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR CAA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTCTTCCTGAGTCTTCATaGGTCTCTTCATCTTTTAAT +
Preference number: 5 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTLPESS*VSSSFN
Trigger: ATTAAAAGATGAAGAGACCAATGAAGACTCAGGAAG...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp GAAAGTTGTAACAGAAGGATTCTTTTTGTCAGCCTCTCTCCTAAAGATTCTATACATCAGCTGTGGCTGTaGAGTCAACACTTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: ESCNRRILFVSLSPKDSIHQLWL*SQHFSQ
Trigger: TTGAGAAAAGTGTTGACTCAACAGCCACAGCTGATG...TATAGAATCTTTAGGAGAGAGGCTGACAAAAAGAATCCTTCTGTTACAACTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR CAA 90 bp AAGAATAAAGGGAACACCGAGACTTGTCTTAAAGAAGCTGTTTGTCATTCTTTTCATCAGCTGTGGCTGTaGAGTCAACACTTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: KNKGNTETCLKEAVCHSFHQLWL*SQHFSQ
Trigger: TTGAGAAAAGTGTTGACTCAACAGCCACAGCTGATG...AAAAGAATGACAAACAGCTTCTTTAAGACAAGTCTCGGTGTTCCCTTTATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR CAA 90 bp CATAACACAGAAAATGCATGGACATGCATCTACAGTAGAGTTAAAAATTTCCTGCATCAGCTGTGGCTGTaGAGTCAACACTTTTCTCAA +
Preference number: 5 (lower is better)
Translates to: HNTENAWTCIYSRVKNFLHQLWL*SQHFSQ
Trigger: TTGAGAAAAGTGTTGACTCAACAGCCACAGCTGATG...CAGGAAATTTTTAACTCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTAGATCTTCAGTGCTTTaGGAAATACCTAAGTCAACA +
Preference number: 5 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTRSSVL*EIPKST
Trigger: TGTTGACTTAGGTATTTCCAAAAGCACTGAAGATCT...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCAGCACTGCTACTGTATaGGATATTATACTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSSTATV*DIILWR
Trigger: CCTCCACAGTATAATATCCAATACAGTAGCAGTGCT...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCATTTGGGGATTTTGTTaGGAGTGCCACAAAGTGTCT +
Preference number: 5 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSIWGFC*ECHKVS
Trigger: AGACACTTTGTGGCACTCCAAACAAAATCCCCAAAT...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp AAATCAGTGGATTTCCATAACACAGAAAATGCATGGACATGCATCTACAGTAGAATTTGGGGATTTTGTTaGGAGTGCCACAAAGTGTCT +
Preference number: 5 (lower is better)
Translates to: KSVDFHNTENAWTCIYSRIWGFC*ECHKVS
Trigger: AGACACTTTGTGGCACTCCAAACAAAATCCCCAAAT...TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATGGAAATCCACTGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTGTCTATTTGGGGATTTaGTTTGGAGTGCCACAAAGT +
Preference number: 5 (lower is better)
Translates to: NINFPCKYLPINLAVFPAVYLGI*FGVPQS
Trigger: ACTTTGTGGCACTCCAAACAAAATCCCCAAATAGAC...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCGTCTATTTGGGGATTTaGTTTGGAGTGCCACAAAGT +
Preference number: 5 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSVYLGI*FGVPQS
Trigger: ACTTTGTGGCACTCCAAACAAAATCCCCAAATAGAC...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ACCCTTCCAAATAGATTTCACACGTCAATCTCCATCAGAGAAACATTTCCCATCCTTCAGGTTGTACCCTaGTTACAAATATACCATCAT +
Preference number: 5 (lower is better)
Translates to: TLPNRFHTSISIRETFPILQVVP*LQIYHH
Trigger: ATGATGGTATATTTGTAACAAGGGTACAACCTGAAG...GATGGGAAATGTTTCTCTGATGGAGATTGACGTGTGAAATCTATTTGGAAGGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR CAA 90 bp CACCTTCACCTACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTCTTCAGGTTGTACCCTaGTTACAAATATACCATCAT +
Preference number: 5 (lower is better)
Translates to: HLHLLTLQFNMHIAKANTLQVVP*LQIYHH
Trigger: ATGATGGTATATTTGTAACAAGGGTACAACCTGAAG...AGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGTAGGTGAAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp CTTCCAAATAGATTTCACACGTCAATCTCCATCAGAGAAACATTTCCCATCTTATGCTGGTCCTTCAGGTaGTACCCTTGTTACAAATAT +
Preference number: 5 (lower is better)
Translates to: LPNRFHTSISIRETFPILCWSFR*YPCYKY
Trigger: ATATTTGTAACAAGGGTACAACCTGAAGGACCAGCA...TAAGATGGGAAATGTTTCTCTGATGGAGATTGACGTGTGAAATCTATTTGGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR CAA 90 bp GGTTTGCTGAAGATCCATTGTTCCGTGAGGCTTAATTCCTTTTCCAAAATTATATGCTGGTCCTTCAGGTaGTACCCTTGTTACAAATAT +
Preference number: 5 (lower is better)
Translates to: GLLKIHCSVRLNSFSKIICWSFR*YPCYKY
Trigger: ATATTTGTAACAAGGGTACAACCTGAAGGACCAGCA...TATAATTTTGGAAAAGGAATTAAGCCTCACGGAACAATGGATCTTCAGCAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR CAA 90 bp TACACTGATACACATAGAAACCCTTTAAAGACTCTGGAAGTGTTGAGTTCACATTGCTGGTCCTTCAGGTaGTACCCTTGTTACAAATAT +
Preference number: 5 (lower is better)
Translates to: YTDTHRNPLKTLEVLSSHCWSFR*YPCYKY
Trigger: ATATTTGTAACAAGGGTACAACCTGAAGGACCAGCA...ATGTGAACTCAACACTTCCAGAGTCTTTAAAGGGTTTCTATGTGTATCAGTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTGCTGGTCCTTCAGGTaGTACCCTTGTTACAAATAT +
Preference number: 5 (lower is better)
Translates to: NINFPCKYLPINLAVFPACWSFR*YPCYKY
Trigger: ATATTTGTAACAAGGGTACAACCTGAAGGACCAGCA...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR CAA 90 bp AAGAATAAAGGGAACACCGAGACTTGTCTTAAAGAAGCTGTTTGTCATTCTTTTAGGCTAACTATTGCCTaGCACACAGTTCAGTCATGT +
Preference number: 5 (lower is better)
Translates to: KNKGNTETCLKEAVCHSFRLTIA*HTVQSC
Trigger: ACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCT...AAAAGAATGACAAACAGCTTCTTTAAGACAAGTCTCGGTGTTCCCTTTATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS TCA 90 bp GGGCCACTTGTGGGGCCTCTTATTATATTTGGCTCTTCGGGATTATaGTTTGAATCAAACTTGAAAATTGCCTTTGTTCCTGATATTAAA +
Preference number: 5 (lower is better)
Translates to: GPLVGPLIIFGSSGL*FESNLKIAFVPDIK
Trigger: TTTAATATCAGGAACAAAGGCAATTTTCAAGTTTGATTCAAATCATAATCCCGAAGAGCCAAATATAATAAGAGGCCCCACAAGTGGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS-3UTR CAA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCGCTGAAGTGAATTGCTaGATAATAGGAGGTCTTGAA +
Preference number: 5 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSAEVNC*IIGGLE
Trigger: TTCAAGACCTCCTATTATCAAGCAATTCACTTCAGC...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTGCTGAAGTGAATTGCTaGATAATAGGAGGTCTTGAA +
Preference number: 5 (lower is better)
Translates to: INFPCKYLPINLAVFPAFAEVNC*IIGGLE
Trigger: TTCAAGACCTCCTATTATCAAGCAATTCACTTCAGC...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR CAA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTAGTGTCTCAAGTTTATaGGAATGGAGAAACAGCACA +
Preference number: 5 (lower is better)
Translates to: NINFPCKYLPINLAVFPASVSSL*EWRNST
Trigger: TGTGCTGTTTCTCCATTCCAATAAACTTGAGACACT...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTAGTGTCTCAAGTTTATaGGAATGGAGAAACAGCACA +
Preference number: 5 (lower is better)
Translates to: INFPCKYLPINLAVFPAFSVSSL*EWRNST
Trigger: TGTGCTGTTTCTCCATTCCAATAAACTTGAGACACT...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR CAA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCAGTGTCTCAAGTTTATaGGAATGGAGAAACAGCACA +
Preference number: 5 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSSVSSL*EWRNST
Trigger: TGTGCTGTTTCTCCATTCCAATAAACTTGAGACACT...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp TACACTGATACACATAGAAACCCTTTAAAGACTCTGGAAGTGTTGAGTTCACATGGCCTCTTATTATATTaGGCTCTTCGGGATTATGAT +
Preference number: 5 (lower is better)
Translates to: YTDTHRNPLKTLEVLSSHGLLLY*ALRDYD
Trigger: ATCATAATCCCGAAGAGCCAAATATAATAAGAGGCC...ATGTGAACTCAACACTTCCAGAGTCTTTAAAGGGTTTCTATGTGTATCAGTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTGGCCTCTTATTATATTaGGCTCTTCGGGATTATGAT +
Preference number: 5 (lower is better)
Translates to: INFPCKYLPINLAVFPAFGLLLY*ALRDYD
Trigger: ATCATAATCCCGAAGAGCCAAATATAATAAGAGGCC...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp ACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTCAAATCTCTTAGCACTGCTACTGTATaGGATATTATACTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: THSSIQYAHSKSQHFKSLSTATV*DIILWR
Trigger: CCTCCACAGTATAATATCCAATACAGTAGCAGTGCT...AAGAGATTTGAAGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp CATAACACAGAAAATGCATGGACATGCATCTACAGTAGAGTTAAAAATTTCCTGGTCTATTTGGGGATTTaGTTTGGAGTGCCACAAAGT +
Preference number: 5 (lower is better)
Translates to: HNTENAWTCIYSRVKNFLVYLGI*FGVPQS
Trigger: ACTTTGTGGCACTCCAAACAAAATCCCCAAATAGAC...CAGGAAATTTTTAACTCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp ACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTCAAATCTCTTGTCTATTTGGGGATTTaGTTTGGAGTGCCACAAAGT +
Preference number: 5 (lower is better)
Translates to: THSSIQYAHSKSQHFKSLVYLGI*FGVPQS
Trigger: ACTTTGTGGCACTCCAAACAAAATCCCCAAATAGAC...AAGAGATTTGAAGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp CATAACACAGAAAATGCATGGACATGCATCTACAGTAGAGTTAAAAATTTCCTGGAAACAGCCCTTTATTaGAACACCTTTACACACTGG +
Preference number: 5 (lower is better)
Translates to: HNTENAWTCIYSRVKNFLETALY*NTFTHW
Trigger: CCAGTGTGTAAAGGTGTTCAAATAAAGGGCTGTTTC...CAGGAAATTTTTAACTCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS TCA 90 bp ACTGAATCAGACATCCGAGATGGAGAAGAACAATTGCTGTTATTCTaGTTGCTATTGTGTGTAACTTCATCTGATAAAGAATCTGTTTCC +
Preference number: 5 (lower is better)
Translates to: TESDIRDGEEQLLLF*LLLCVTSSDKESVS
Trigger: GGAAACAGATTCTTTATCAGATGAAGTTACACACAATAGCAATCAGAATAACAGCAATTGTTCTTCTCCATCTCGGATGTCTGATTCAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS GCA 90 bp TGTATAAATAACAGAGTACCAAGGAGCAATTTTTCCTCCACACCATaGAAATATTTGAATCATGGTACAAGTTTTCTCCCTGACTTCTCT +
Preference number: 5 (lower is better)
Translates to: CINNRVPRSNFSSTP*KYLNHGTSFLPDFS
Trigger: AGAGAAGTCAGGGAGAAAACTTGTACCATGATTCAAATATTTGCATGGTGTGGAGGAAAAATTGCTCCTTGGTACTCTGTTATTTATACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506744.1
CDS CCA 90 bp GCTTATGAGGAAACTTCTCGTACAATGATGAGTTCAACTGTATTCTaGAAAGTTTTTAGCAAGGACACTGCTTGTCCATGTTCAATATTT +
Preference number: 5 (lower is better)
Translates to: AYEETSRTMMSSTVF*KVFSKDTACPCSIF
Trigger: AAATATTGAACATGGACAAGCAGTGTCCTTGCTAAAAACTTTCCAGAATACAGTTGAACTCATCATTGTACGAGAAGTTTCCTCATAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000503913.5
ENST00000506030.5
ENST00000506744.1
ENST00000508515.1
ENST00000509946.1
ENST00000511297.5
CDS-3UTR CAA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTAACGTTGTTAAATCATaGTCTGGCAAACTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: NINFPCKYLPINLAVFPANVVKS*SGKLSL
Trigger: CAAACTGAGTTTGCCAGACAATGATTTAACAACGTT...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR CAA 90 bp CTTCCAAATAGATTTCACACGTCAATCTCCATCAGAGAAACATTTCCCATCTTACACTGGCCTCCACAATaGTCAAAACTTTACAATTTT +
Preference number: 5 (lower is better)
Translates to: LPNRFHTSISIRETFPILHWPPQ*SKLYNF
Trigger: AAAATTGTAAAGTTTTGACAATTGTGGAGGCCAGTG...TAAGATGGGAAATGTTTCTCTGATGGAGATTGACGTGTGAAATCTATTTGGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR CAA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCCACTGGCCTCCACAATaGTCAAAACTTTACAATTTT +
Preference number: 5 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSHWPPQ*SKLYNF
Trigger: AAAATTGTAAAGTTTTGACAATTGTGGAGGCCAGTG...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTCACTGGCCTCCACAATaGTCAAAACTTTACAATTTT +
Preference number: 5 (lower is better)
Translates to: NINFPCKYLPINLAVFPAHWPPQ*SKLYNF
Trigger: AAAATTGTAAAGTTTTGACAATTGTGGAGGCCAGTG...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR CAA 90 bp CTTCCAAATAGATTTCACACGTCAATCTCCATCAGAGAAACATTTCCCATCTTATTAATCTGCCAAAATTaGCTGGCAAGAACTCAAGAA +
Preference number: 5 (lower is better)
Translates to: LPNRFHTSISIRETFPILLICQN*LARTQE
Trigger: TTCTTGAGTTCTTGCCAGCAAATTTTGGCAGATTAA...TAAGATGGGAAATGTTTCTCTGATGGAGATTGACGTGTGAAATCTATTTGGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR CAA 90 bp GGTTTGCTGAAGATCCATTGTTCCGTGAGGCTTAATTCCTTTTCCAAAATTATATTAATCTGCCAAAATTaGCTGGCAAGAACTCAAGAA +
Preference number: 5 (lower is better)
Translates to: GLLKIHCSVRLNSFSKIILICQN*LARTQE
Trigger: TTCTTGAGTTCTTGCCAGCAAATTTTGGCAGATTAA...TATAATTTTGGAAAAGGAATTAAGCCTCACGGAACAATGGATCTTCAGCAAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR CAA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTTTAATCTGCCAAAATTaGCTGGCAAGAACTCAAGAA +
Preference number: 5 (lower is better)
Translates to: INFPCKYLPINLAVFPAFLICQN*LARTQE
Trigger: TTCTTGAGTTCTTGCCAGCAAATTTTGGCAGATTAA...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR CAA 90 bp GGTTTGCTGAAGATCCATTGTTCCGTGAGGCTTAATTCCTTTTCCAAAATTATACTTCCTGAGTCTTCATaGGTCTCTTCATCTTTTAAT +
Preference number: 5 (lower is better)
Translates to: GLLKIHCSVRLNSFSKIILPESS*VSSSFN
Trigger: ATTAAAAGATGAAGAGACCAATGAAGACTCAGGAAG...TATAATTTTGGAAAAGGAATTAAGCCTCACGGAACAATGGATCTTCAGCAAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS-3UTR CAA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTCTTCCTGAGTCTTCATaGGTCTCTTCATCTTTTAAT +
Preference number: 5 (lower is better)
Translates to: NINFPCKYLPINLAVFPALPESS*VSSSFN
Trigger: ATTAAAAGATGAAGAGACCAATGAAGACTCAGGAAG...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp TACACTGATACACATAGAAACCCTTTAAAGACTCTGGAAGTGTTGAGTTCACATAATATCAATATGAGTTaGTTTCACTGGAGAGCAGAG +
Preference number: 5 (lower is better)
Translates to: YTDTHRNPLKTLEVLSSHNINMS*FHWRAE
Trigger: CTCTGCTCTCCAGTGAAACAAACTCATATTGATATT...ATGTGAACTCAACACTTCCAGAGTCTTTAAAGGGTTTCTATGTGTATCAGTGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp ATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTTTTAATATCAATATGAGTTaGTTTCACTGGAGAGCAGAG +
Preference number: 5 (lower is better)
Translates to: INFPCKYLPINLAVFPAFNINMS*FHWRAE
Trigger: CTCTGCTCTCCAGTGAAACAAACTCATATTGATATT...AAAAGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCAATATCAATATGAGTTaGTTTCACTGGAGAGCAGAG +
Preference number: 5 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSNINMS*FHWRAE
Trigger: CTCTGCTCTCCAGTGAAACAAACTCATATTGATATT...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp AAATCAGTGGATTTCCATAACACAGAAAATGCATGGACATGCATCTACAGTAGATCCAAATTAGGATACTaGTTTCCATTTTCCAAGTGC +
Preference number: 5 (lower is better)
Translates to: KSVDFHNTENAWTCIYSRSKLGY*FPFSKC
Trigger: GCACTTGGAAAATGGAAACAAGTATCCTAATTTGGA...TCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATGGAAATCCACTGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTAGATCTTCAGTGCTTTaGGAAATACCTAAGTCAACA +
Preference number: 5 (lower is better)
Translates to: NINFPCKYLPINLAVFPARSSVL*EIPKST
Trigger: TGTTGACTTAGGTATTTCCAAAAGCACTGAAGATCT...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000508515.1
CDS-3UTR CAA 90 bp CATAACACAGAAAATGCATGGACATGCATCTACAGTAGAGTTAAAAATTTCCTGGGCCTCTTATTATATTaGGCTCTTCGGGATTATGAT +
Preference number: 5 (lower is better)
Translates to: HNTENAWTCIYSRVKNFLGLLLY*ALRDYD
Trigger: ATCATAATCCCGAAGAGCCAAATATAATAAGAGGCC...CAGGAAATTTTTAACTCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp TACACTGATACACATAGAAACCCTTTAAAGACTCTGGAAGTGTTGAGTTCACATCTTCAGGTTGTACCCTaGTTACAAATATACCATCAT +
Preference number: 5 (lower is better)
Translates to: YTDTHRNPLKTLEVLSSHLQVVP*LQIYHH
Trigger: ATGATGGTATATTTGTAACAAGGGTACAACCTGAAG...ATGTGAACTCAACACTTCCAGAGTCTTTAAAGGGTTTCTATGTGTATCAGTGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp AATATTAATTTCCCCTGTAAGTATCTTCCAATAAATCTTGCTGTCTTCCCCGCTCTTCAGGTTGTACCCTaGTTACAAATATACCATCAT +
Preference number: 5 (lower is better)
Translates to: NINFPCKYLPINLAVFPALQVVP*LQIYHH
Trigger: ATGATGGTATATTTGTAACAAGGGTACAACCTGAAG...AGCGGGGAAGACAGCAAGATTTATTGGAAGATACTTACAGGGGAAATTAATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
ENST00000416865.6
ENST00000508515.1
CDS-3UTR CAA 90 bp TACACTGATACACATAGAAACCCTTTAAAGACTCTGGAAGTGTTGAGTTCACATAACCTTCGTAACATTTaGTGTTACAGGCAACACAAT +
Preference number: 5 (lower is better)
Translates to: YTDTHRNPLKTLEVLSSHNLRNI*CYRQHN
Trigger: ATTGTGTTGCCTGTAACACAAAATGTTACGAAGGTT...ATGTGAACTCAACACTTCCAGAGTCTTTAAAGGGTTTCTATGTGTATCAGTGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCAACCTTCGTAACATTTaGTGTTACAGGCAACACAAT +
Preference number: 5 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSNLRNI*CYRQHN
Trigger: ATTGTGTTGCCTGTAACACAAAATGTTACGAAGGTT...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp AAAATCAAGGCTAACTATTGCCTTGCACACAGTTCAGTCATGTATATGAAATCCAACAAAGAAAGGCAGTaGGTGGTAAAACACTATTAC +
Preference number: 5 (lower is better)
Translates to: KIKANYCLAHSSVMYMKSNKERQ*VVKHYY
Trigger: GTAATAGTGTTTTACCACCAACTGCCTTTCTTTGTT...GGATTTCATATACATGACTGAACTGTGTGCAAGGCAATAGTTAGCCTTGATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS TCA 90 bp AATAGAAGCAAGTCCACCAACAGTCAGTGTGAGACATACTACATCTaGCAAGAATTAGAAACAACTTTCCTAACAAACGTATCTAAAAGA +
Preference number: 5 (lower is better)
Translates to: NRSKSTNSQCETYYI*QELETTFLTNVSKR
Trigger: TCTTTTAGATACGTTTGTTAGGAAAGTTGTTTCTAATTCTTGTCAGATGTAGTATGTCTCACACTGACTGTTGGTGGACTTGCTTCTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515185.1
CDS-3UTR CAA 90 bp GAAAGTTGTAACAGAAGGATTCTTTTTGTCAGCCTCTCTCCTAAAGATTCTATACTGACAGTTAAAAAGTaGCTTTGGAAGCTCTTCAAT +
Preference number: 5 (lower is better)
Translates to: ESCNRRILFVSLSPKDSILTVKK*LWKLFN
Trigger: ATTGAAGAGCTTCCAAAGCAACTTTTTAACTGTCAG...TATAGAATCTTTAGGAGAGAGGCTGACAAAAAGAATCCTTCTGTTACAACTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000284037.10
CDS-3UTR CAA 90 bp CATAACACAGAAAATGCATGGACATGCATCTACAGTAGAGTTAAAAATTTCCTGAACGTTGTTAAATCATaGTCTGGCAAACTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: HNTENAWTCIYSRVKNFLNVVKS*SGKLSL
Trigger: CAAACTGAGTTTGCCAGACAATGATTTAACAACGTT...CAGGAAATTTTTAACTCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp ACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTCAAATCTCTTTTAATCTGCCAAAATTaGCTGGCAAGAACTCAAGAA +
Preference number: 5 (lower is better)
Translates to: THSSIQYAHSKSQHFKSLLICQN*LARTQE
Trigger: TTCTTGAGTTCTTGCCAGCAAATTTTGGCAGATTAA...AAGAGATTTGAAGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp ACTCACTCTTCAATTCAATATGCACATAGCAAAAGCCAACACTTCAAATCTCTTAATATCAATATGAGTTaGTTTCACTGGAGAGCAGAG +
Preference number: 5 (lower is better)
Translates to: THSSIQYAHSKSQHFKSLNINMS*FHWRAE
Trigger: CTCTGCTCTCCAGTGAAACAAACTCATATTGATATT...AAGAGATTTGAAGTGTTGGCTTTTGCTATGTGCATATTGAATTGAAGAGTGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp CATAACACAGAAAATGCATGGACATGCATCTACAGTAGAGTTAAAAATTTCCTGAGATCTTCAGTGCTTTaGGAAATACCTAAGTCAACA +
Preference number: 5 (lower is better)
Translates to: HNTENAWTCIYSRVKNFLRSSVL*EIPKST
Trigger: TGTTGACTTAGGTATTTCCAAAAGCACTGAAGATCT...CAGGAAATTTTTAACTCTACTGTAGATGCATGTCCATGCATTTTCTGTGTTATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380943.6
CDS-3UTR CAA 90 bp AAGAATAAAGGGAACACCGAGACTTGTCTTAAAGAAGCTGTTTGTCATTCTTTTAACAAAGAAAGGCAGTaGGTGGTAAAACACTATTAC +
Preference number: 5 (lower is better)
Translates to: KNKGNTETCLKEAVCHSFNKERQ*VVKHYY
Trigger: GTAATAGTGTTTTACCACCAACTGCCTTTCTTTGTT...AAAAGAATGACAAACAGCTTCTTTAAGACAAGTCTCGGTGTTCCCTTTATTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284037.10
ENST00000380935.5
CDS TCA 72 bp CAGTCACTTTGGATCCAGCTGAATATCTCTCTCGGGTaGGAGCGGATGTGGACTGGCCTCCCACAGAAGAAG +
Preference number: 6 (lower is better)
Translates to: QSLWIQLNISLG*ERMWTGLPQKK
Trigger: CTTCTTCTGTGGGAGGCCAGTCCACATCCGCTCTCACCCGAGAGAGATATTCAGCTGGATCCAAAGTGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000507490.1
CDS TCA 72 bp ACTTCGAGTTACTGCAGGAATAAGTCGGTCGTTTGGTaGGATGGCCCACATTTCCCCATGTCTTGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: TSSYCRNKSVVW*DGPHFPMSCWA
Trigger: GGCCCAGCAAGACATGGGGAAATGTGGGCCATCTCACCAAACGACCGACTTATTCCTGCAGTAACTCGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS CCA 72 bp ATCTCCTTCAGGAATCTGAGCCCGCCTTGTAGAGCCTaGATCACCAAGATTTACAGAGGCTGTGGAGGACAC +
Preference number: 6 (lower is better)
Translates to: ISFRNLSPPCRA*ITKIYRGCGGH
Trigger: GTGTCCTCCACAGCCTCTGTAAATCTTGGTGATCCAGGCTCTACAAGGCGGGCTCAGATTCCTGAAGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS CCA 72 bp TGTTTTGCCAGTTCATGGCCTTGTCTAGGAGAACAATaGGGCTGTGTATATGGAGGCTGGTGGGCCACTTTC +
Preference number: 6 (lower is better)
Translates to: CFASSWPCLGEQ*GCVYGGWWATF
Trigger: GAAAGTGGCCCACCAGCCTCCATATACACAGCCCCATTGTTCTCCTAGACAAGGCCATGAACTGGCAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000284037.10
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000505822.1
ENST00000506030.5
ENST00000511297.5
ENST00000512354.1
CDS TCA 72 bp GATTTCCTTCCCTTCATCAGTCACTTTGGATCCAGCTaGATATCTCTCTCGGGTGAGAGCGGATGTGGACTG +
Preference number: 6 (lower is better)
Translates to: DFLPFISHFGSS*ISLSGESGCGL
Trigger: CAGTCCACATCCGCTCTCACCCGAGAGAGATATTCAGCTGGATCCAAAGTGACTGATGAAGGGAAGGAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000507490.1
CDS CAA 90 bp TTCAAGGCTTCGCTTGACATGATTTCCTTCCCTTCATCAGTCACTTaGGATCCAGCTGAATATCTCTCTCGGGTGAGAGCGGATGTGGAC +
Preference number: 6 (lower is better)
Translates to: FKASLDMISFPSSVT*DPAEYLSRVRADVD
Trigger: GTCCACATCCGCTCTCACCCGAGAGAGATATTCAGCTGGATCCAAAGTGACTGATGAAGGGAAGGAAATCATGTCAAGCGAAGCCTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000507490.1
CDS CAA 90 bp GCCTGGATCACCAAGATTTACAGAGGCTGTGGAGGACACACTACTTaGTCGCTGGATTGTACTTCGAGTTACTGCAGGAATAAGTCGGTC +
Preference number: 6 (lower is better)
Translates to: AWITKIYRGCGGHTT*SLDCTSSYCRNKSV
Trigger: GACCGACTTATTCCTGCAGTAACTCGAAGTACAATCCAGCGACAAAGTAGTGTGTCCTCCACAGCCTCTGTAAATCTTGGTGATCCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS TCA 72 bp CGTCTCAGGGCAGCTTTTTCAAGGCTTCGCTTGACATaGTTTCCTTCCCTTCATCAGTCACTTTGGATCCAG +
Preference number: 6 (lower is better)
Translates to: RLRAAFSRLRLT*FPSLHQSLWIQ
Trigger: CTGGATCCAAAGTGACTGATGAAGGGAAGGAAATCATGTCAAGCGAAGCCTTGAAAAAGCTGCCCTGAGACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000507490.1
CDS CAA 72 bp TCGCTTGACATGATTTCCTTCCCTTCATCAGTCACTTaGGATCCAGCTGAATATCTCTCTCGGGTGAGAGCG +
Preference number: 6 (lower is better)
Translates to: SLDMISFPSSVT*DPAEYLSRVRA
Trigger: CGCTCTCACCCGAGAGAGATATTCAGCTGGATCCAAAGTGACTGATGAAGGGAAGGAAATCATGTCAAGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000507490.1
CDS CAA 72 bp CCTCACTCGAATCTCTTGTTTTGCCAGTTCATGGCCTaGTCTAGGAGAACAATGGGGCTGTGTATATGGAGG +
Preference number: 6 (lower is better)
Translates to: PHSNLLFCQFMA*SRRTMGLCIWR
Trigger: CCTCCATATACACAGCCCCATTGTTCTCCTAGACAAGGCCATGAACTGGCAAAACAAGAGATTCGAGTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000505822.1
ENST00000506030.5
ENST00000511297.5
CDS TCA 72 bp GCCCACATTTCCCCATGTCTTGCTGGGCCAAGTCTCTaGTGTAAATGGTATGCAGTATTAGCTCGAACATTG +
Preference number: 6 (lower is better)
Translates to: AHISPCLAGPSL*CKWYAVLARTL
Trigger: CAATGTTCGAGCTAATACTGCATACCATTTACATCAGAGACTTGGCCCAGCAAGACATGGGGAAATGTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS CCA 72 bp TTTACAGAGGCTGTGGAGGACACACTACTTTGTCGCTaGATTGTACTTCGAGTTACTGCAGGAATAAGTCGG +
Preference number: 6 (lower is better)
Translates to: FTEAVEDTLLCR*IVLRVTAGISR
Trigger: CCGACTTATTCCTGCAGTAACTCGAAGTACAATCCAGCGACAAAGTAGTGTGTCCTCCACAGCCTCTGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS CAA 72 bp GAGGACCATATATTTGAGGTGCAGATTGTGGGCCACTaGTGGGGCCTCTTATTATATTTGGCTCTTCGGGAT +
Preference number: 6 (lower is better)
Translates to: EDHIFEVQIVGH*WGLLLYLALRD
Trigger: ATCCCGAAGAGCCAAATATAATAAGAGGCCCCACAAGTGGCCCACAATCTGCACCTCAAATATATGGTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS GCA 72 bp AAACTGGCATGGTCTATTTGGGGATTTTGTTTGGAGTaGCACAAAGTGTCTTTGACTGCAGCACTGCTACTG +
Preference number: 6 (lower is better)
Translates to: KLAWSIWGFCLE*HKVSLTAALLL
Trigger: CAGTAGCAGTGCTGCAGTCAAAGACACTTTGTGGCACTCCAAACAAAATCCCCAAATAGACCATGCCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS CCA 72 bp GACTGCAGCACTGCTACTGTATTGGATATTATACTGTaGAGGACCATATATTTGAGGTGCAGATTGTGGGCC +
Preference number: 6 (lower is better)
Translates to: DCSTATVLDIIL*RTIYLRCRLWA
Trigger: GGCCCACAATCTGCACCTCAAATATATGGTCCTCCACAGTATAATATCCAATACAGTAGCAGTGCTGCAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS CAA 72 bp ACCAAGATTTACAGAGGCTGTGGAGGACACACTACTTaGTCGCTGGATTGTACTTCGAGTTACTGCAGGAAT +
Preference number: 6 (lower is better)
Translates to: TKIYRGCGGHTT*SLDCTSSYCRN
Trigger: ATTCCTGCAGTAACTCGAAGTACAATCCAGCGACAAAGTAGTGTGTCCTCCACAGCCTCTGTAAATCTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS CAA 90 bp GTATTGGATATTATACTGTGGAGGACCATATATTTGAGGTGCAGATaGTGGGCCACTTGTGGGGCCTCTTATTATATTTGGCTCTTCGGG +
Preference number: 6 (lower is better)
Translates to: VLDIILWRTIYLRCR*WATCGASYYIWLFG
Trigger: CCCGAAGAGCCAAATATAATAAGAGGCCCCACAAGTGGCCCACAATCTGCACCTCAAATATATGGTCCTCCACAGTATAATATCCAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS CAA 90 bp TATACTGTGGAGGACCATATATTTGAGGTGCAGATTGTGGGCCACTaGTGGGGCCTCTTATTATATTTGGCTCTTCGGGATTATGATTTG +
Preference number: 6 (lower is better)
Translates to: YTVEDHIFEVQIVGH*WGLLLYLALRDYDL
Trigger: CAAATCATAATCCCGAAGAGCCAAATATAATAAGAGGCCCCACAAGTGGCCCACAATCTGCACCTCAAATATATGGTCCTCCACAGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS CAA 90 bp GCATGGTCTATTTGGGGATTTTGTTTGGAGTGCCACAAAGTGTCTTaGACTGCAGCACTGCTACTGTATTGGATATTATACTGTGGAGGA +
Preference number: 6 (lower is better)
Translates to: AWSIWGFCLECHKVS*TAALLLYWILYCGG
Trigger: TCCTCCACAGTATAATATCCAATACAGTAGCAGTGCTGCAGTCAAAGACACTTTGTGGCACTCCAAACAAAATCCCCAAATAGACCATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS TCA 72 bp TATTTCATTAATAGAGGGTCGAGCACTCTGAGGTCTTaGTGCATTTGGACCATCTATGCTGTATGTTCGTGC +
Preference number: 6 (lower is better)
Translates to: YFINRGSSTLRS*CIWTIYAVCSC
Trigger: GCACGAACATACAGCATAGATGGTCCAAATGCATCAAGACCTCAGAGTGCTCGACCCTCTATTAATGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
ENST00000511671.5
CDS TCA 72 bp CTCTCTGGTATTTCATTAATAGAGGGTCGAGCACTCTaGGGTCTTGATGCATTTGGACCATCTATGCTGTAT +
Preference number: 6 (lower is better)
Translates to: LSGISLIEGRAL*GLDAFGPSMLY
Trigger: ATACAGCATAGATGGTCCAAATGCATCAAGACCTCAGAGTGCTCGACCCTCTATTAATGAAATACCAGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
ENST00000511671.5
CDS CAA 72 bp ATTATACTGTGGAGGACCATATATTTGAGGTGCAGATaGTGGGCCACTTGTGGGGCCTCTTATTATATTTGG +
Preference number: 6 (lower is better)
Translates to: IILWRTIYLRCR*WATCGASYYIW
Trigger: CCAAATATAATAAGAGGCCCCACAAGTGGCCCACAATCTGCACCTCAAATATATGGTCCTCCACAGTATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS CAA 90 bp AGCACTGCTACTGTATTGGATATTATACTGTGGAGGACCATATATTaGAGGTGCAGATTGTGGGCCACTTGTGGGGCCTCTTATTATATT +
Preference number: 6 (lower is better)
Translates to: STATVLDIILWRTIY*RCRLWATCGASYYI
Trigger: AATATAATAAGAGGCCCCACAAGTGGCCCACAATCTGCACCTCAAATATATGGTCCTCCACAGTATAATATCCAATACAGTAGCAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS CAA 90 bp TTTGGAGTGCCACAAAGTGTCTTTGACTGCAGCACTGCTACTGTATaGGATATTATACTGTGGAGGACCATATATTTGAGGTGCAGATTG +
Preference number: 6 (lower is better)
Translates to: FGVPQSVFDCSTATV*DIILWRTIYLRCRL
Trigger: CAATCTGCACCTCAAATATATGGTCCTCCACAGTATAATATCCAATACAGTAGCAGTGCTGCAGTCAAAGACACTTTGTGGCACTCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS TCA 72 bp GCATCATTCAGATACAACTGGGTTAGGTTTAACAGCTaGGAAAATCCATCAGGGAGCTTGGAAATAGGGTTT +
Preference number: 6 (lower is better)
Translates to: ASFRYNWVRFNS*ENPSGSLEIGF
Trigger: AAACCCTATTTCCAAGCTCCCTGATGGATTTTCTCAGCTGTTAAACCTAACCCAGTTGTATCTGAATGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS TCA 72 bp AGAATGTTTAGCATAACTTTGATTTTCTGTGCTCTCTaGTCTAGGAAGGAGCTGAGGAGGAAAACTGGCATG +
Preference number: 6 (lower is better)
Translates to: RMFSITLIFCAL*SRKELRRKTGM
Trigger: CATGCCAGTTTTCCTCCTCAGCTCCTTCCTAGATCAGAGAGCACAGAAAATCAAAGTTATGCTAAACATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS TCA 72 bp TTTGGGGATTTTGTTTGGAGTGCCACAAAGTGTCTTTaGCTGCAGCACTGCTACTGTATTGGATATTATACT +
Preference number: 6 (lower is better)
Translates to: FGDFVWSATKCL*LQHCYCIGYYT
Trigger: AGTATAATATCCAATACAGTAGCAGTGCTGCAGTCAAAGACACTTTGTGGCACTCCAAACAAAATCCCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS TCA 72 bp CAAGGAGCAATTTTTCCTCCACACCATGCAAATATTTaGATCATGGTACAAGTTTTCTCCCTGACTTCTCTG +
Preference number: 6 (lower is better)
Translates to: QGAIFPPHHANI*IMVQVFSLTSL
Trigger: CAGAGAAGTCAGGGAGAAAACTTGTACCATGATTCAAATATTTGCATGGTGTGGAGGAAAAATTGCTCCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506744.1
CDS GCA 72 bp TTAGCATCCATCCAAAACTCTTTCAATCCACTTAGTTaGTCAAGTACTTCAGGCACTTCCGTGAATTCGTTA +
Preference number: 6 (lower is better)
Translates to: LASIQNSFNPLS*SSTSGTSVNSL
Trigger: TAACGAATTCACGGAAGTGCCTGAAGTACTTGAGCAACTAAGTGGATTGAAAGAGTTTTGGATGGATGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS CAA 72 bp ATTTGGGGATTTTGTTTGGAGTGCCACAAAGTGTCTTaGACTGCAGCACTGCTACTGTATTGGATATTATAC +
Preference number: 6 (lower is better)
Translates to: IWGFCLECHKVS*TAALLLYWILY
Trigger: GTATAATATCCAATACAGTAGCAGTGCTGCAGTCAAAGACACTTTGTGGCACTCCAAACAAAATCCCCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS CCA 72 bp GTGAATTCGTTACTTCCCAAATCCAGTCTTTCCAGCTaGGTCAGTCTATTCATAGTTTTAGGCAACATTTTT +
Preference number: 6 (lower is better)
Translates to: VNSLLPKSSLSS*VSLFIVLGNIF
Trigger: AAAAATGTTGCCTAAAACTATGAATAGACTGACCCAGCTGGAAAGACTGGATTTGGGAAGTAACGAATTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS CCA 72 bp GAAACTTCTCGTACAATGATGAGTTCAACTGTATTCTaGAAAGTTTTTAGCAAGGACACTGCTTGTCCATGT +
Preference number: 6 (lower is better)
Translates to: ETSRTMMSSTVF*KVFSKDTACPC
Trigger: ACATGGACAAGCAGTGTCCTTGCTAAAAACTTTCCAGAATACAGTTGAACTCATCATTGTACGAGAAGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000503913.5
ENST00000506030.5
ENST00000506744.1
ENST00000508515.1
ENST00000509946.1
ENST00000511297.5
CDS TCA 72 bp ATTTTTAGCCCTCCAATCTCCATATTAGTTATGCTATaGGATTTCACAACAGATCCAACTGGACCACTTTTC +
Preference number: 6 (lower is better)
Translates to: IFSPPISILVML*DFTTDPTGPLF
Trigger: GAAAAGTGGTCCAGTTGGATCTGTTGTGAAATCTCATAGCATAACTAATATGGAGATTGGAGGGCTAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS TCA 72 bp GTGGGGCCTCTTATTATATTTGGCTCTTCGGGATTATaGTTTGAATCAAACTTGAAAATTGCCTTTGTTCCT +
Preference number: 6 (lower is better)
Translates to: VGPLIIFGSSGL*FESNLKIAFVP
Trigger: AGGAACAAAGGCAATTTTCAAGTTTGATTCAAATCATAATCCCGAAGAGCCAAATATAATAAGAGGCCCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
CDS GCA 72 bp GGAACTTTACTTTTTCCTGGAGGATCTAATAAAGAATaGTCAGAACCAACCCTTGCATTTGGTCTTTTTGAA +
Preference number: 6 (lower is better)
Translates to: GTLLFPGGSNKE*SEPTLAFGLFE
Trigger: TTCAAAAAGACCAAATGCAAGGGTTGGTTCTGAGCATTCTTTATTAGATCCTCCAGGAAAAAGTAAAGTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
ENST00000511671.5
CDS CAA 90 bp AAGTTAGTAAGCTGCCCAATAGATGAAGGCAAAGCTTCAACTTCATaGAAACTACAATCCAGTTCTTCTACTGATATTAACCCTCCTATA +
Preference number: 6 (lower is better)
Translates to: KLVSCPIDEGKASTS*KLQSSSSTDINPPI
Trigger: TATAGGAGGGTTAATATCAGTAGAAGAACTGGATTGTAGTTTCAATGAAGTTGAAGCTTTGCCTTCATCTATTGGGCAGCTTACTAACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000416865.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5
ENST00000515185.1
CDS CAA 72 bp CCATTTACCTTATTTACGGATTCCAAATTAGGATACTaGTTTCCATTTTCCAAGTGCTCAGTTTCCTCTTTA +
Preference number: 6 (lower is better)
Translates to: PFTLFTDSKLGY*FPFSKCSVSSL
Trigger: TAAAGAGGAAACTGAGCACTTGGAAAATGGAAACAAGTATCCTAATTTGGAATCCGTAAATAAGGTAAATGG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000284037.10
ENST00000380935.5
ENST00000380938.6
ENST00000380943.6
ENST00000506030.5
ENST00000508515.1
ENST00000511297.5