RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ERBB4 (Homo sapiens)

Ensembl gene IDs: ENSG00000178568

Ensembl transcript IDs: ENST00000260943.10, ENST00000342788.9, ENST00000402597.6, ENST00000435846.1, ENST00000436443.5, ENST00000459774.1, ENST00000463121.1, ENST00000484474.1, ENST00000484594.5

Found 1007 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACTATGGCTTAAGAAAGGAACAGGACAGCATCGGGGGACTACTTTaGACCAGGGTGGTAGAAAGGGAAGAGAGCAGTGCCAGTTGTGTC +
Preference number: 1 (lower is better)
Translates to: HYGLRKEQDSIGGLL*TRVVEREESSASCV
Trigger: GACACAACTGGCACTGCTCTCTTCCCTTTCTACCACCCTGGTTCAAAGTAGTCCCCCGATGCTGTCCTGTTCCTTTCTTAAGCCATAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR TCA 90 bp GAGATCCCTTTTCCTAGAGACTTCTCTGAATGGATAGGAGAGCCCTaGGCTATTAGATTGTGGCCCCTGAATCACTCTGTGTCTTTACCC +
Preference number: 1 (lower is better)
Translates to: EIPFPRDFSEWIGEP*AIRLWPLNHSVSLP
Trigger: GGGTAAAGACACAGAGTGATTCAGGGGCCACAATCTAATAGCTCAGGGCTCTCCTATCCATTCAGAGAAGTCTCTAGGAAAAGGGATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR CCA 90 bp ATACCCAATCCAGTGTGTTTCTTCCAGTTCAATGGATTCCCTCATTaGGCCACCCCTGAAAGTATCAGTAGTTTTCCTGAACCACAGAGA +
Preference number: 1 (lower is better)
Translates to: IPNPVCFFQFNGFPH*ATPESISSFPEPQR
Trigger: TCTCTGTGGTTCAGGAAAACTACTGATACTTTCAGGGGTGGCCCAATGAGGGAATCCATTGAACTGGAAGAAACACACTGGATTGGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR CCA 90 bp GCAAATAGCAACCAGGCGATACCAATCTGCATTTATATGTTTACATaGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCATGT +
Preference number: 1 (lower is better)
Translates to: ANSNQAIPICIYMFT*GKAVLQTDTHRSPC
Trigger: ACATGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATAAATGCAGATTGGTATCGCCTGGTTGCTATTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR GCA 90 bp ATGAAGATAATGTGCTGGCCTCTCATCATAGTCCCTGGATACCGTTaGAAGGTTCCTAATTTGCTTGGTTTGGCATTTCCACAGTCTTTA +
Preference number: 1 (lower is better)
Translates to: MKIMCWPLIIVPGYR*KVPNLLGLAFPQSL
Trigger: TAAAGACTGTGGAAATGCCAAACCAAGCAAATTAGGAACCTTGCAACGGTATCCAGGGACTATGATGAGAGGCCAGCACATTATCTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR TCA 90 bp AATCTGCATTTATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTaGTACACACCGAAGTCCATGTACACAAACAGAGGCACAGTAAGA +
Preference number: 1 (lower is better)
Translates to: NLHLYVYMGQGCPSN*YTPKSMYTNRGTVR
Trigger: TCTTACTGTGCCTCTGTTTGTGTACATGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATAAATGCAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR GCA 90 bp ACTCGCATTCCTTCTTACGAAGTATACGAACTGAACAAATTTCCTTaGGTAGCAAAGGTGACATATGAAGATAATGTGCTGGCCTCTCAT +
Preference number: 1 (lower is better)
Translates to: TRIPSYEVYELNKFP*VAKVTYEDNVLASH
Trigger: ATGAGAGGCCAGCACATTATCTTCATATGTCACCTTTGCTACGCAAGGAAATTTGTTCAGTTCGTATACTTCGTAAGAAGGAATGCGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR TCA 90 bp CATTTTTCTTTGATTCCTAACAAGGTAATCACTTACTTGCAAAGCTaGCTGTCAAAGAGTATTTTCCAGAGGAAGCATGTGAATACCCCC +
Preference number: 1 (lower is better)
Translates to: HFSLIPNKVITYLQS*LSKSIFQRKHVNTP
Trigger: GGGGGTATTCACATGCTTCCTCTGGAAAATACTCTTTGACAGTCAGCTTTGCAAGTAAGTGATTACCTTGTTAGGAATCAAAGAAAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR CAA 90 bp CAAACACAAGGGCCCCTGGCCCGACACAATGCCCACAACAGCTTCTaGTTTCCAACTGCAGAGAGAACTCAGATCTCTGGGATCAGAAAA +
Preference number: 2 (lower is better)
Translates to: QTQGPLARHNAHNSF*FPTAERTQISGIRK
Trigger: TTTTCTGATCCCAGAGATCTGAGTTCTCTCTGCAGTTGGAAACAAGAAGCTGTTGTGGGCATTGTGTCGGGCCAGGGGCCCTTGTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR CAA 90 bp CCACTATGGCTTAAGAAAGGAACAGGACAGCATCGGGGGACTACTTaGAACCAGGGTGGTAGAAAGGGAAGAGAGCAGTGCCAGTTGTGT +
Preference number: 2 (lower is better)
Translates to: PLWLKKGTGQHRGTT*NQGGRKGREQCQLC
Trigger: ACACAACTGGCACTGCTCTCTTCCCTTTCTACCACCCTGGTTCAAAGTAGTCCCCCGATGCTGTCCTGTTCCTTTCTTAAGCCATAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR TCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCCCCTCTTATACATGCTaGAATATGTTTTCCCAGGGG +
Preference number: 2 (lower is better)
Translates to: MSPGQELGEAGACKSDRSPSYTC*NMFSQG
Trigger: CCCCTGGGAAAACATATTTCAGCATGTATAAGAGGG...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCAGCTCTAGGATCCTCTaGCCACAGTATACAGTAGAA +
Preference number: 2 (lower is better)
Translates to: MSPGQELGEAGACKSDRSSSRIL*PQYTVE
Trigger: TTCTACTGTATACTGTGGGCAGAGGATCCTAGAGCT...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR TCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCCCTCTACAAAATCAGTaGGACTTGAACCGAGTATCT +
Preference number: 2 (lower is better)
Translates to: MSPGQELGEAGACKSDRSPLQNQ*DLNRVS
Trigger: AGATACTCGGTTCAAGTCTCACTGATTTTGTAGAGG...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCCCAAGGACCACCATCTaGTTTTGGTTTAATGGTGAA +
Preference number: 2 (lower is better)
Translates to: MSPGQELGEAGACKSDRSPRTTI*FWFNGE
Trigger: TTCACCATTAAACCAAAAGCAGATGGTGGTCCTTGG...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCCTTTTGTGGTGCAGATaGTTTGTGGTTCTGGATCTA +
Preference number: 2 (lower is better)
Translates to: MSPGQELGEAGACKSDRSLLWCR*FVVLDL
Trigger: TAGATCCAGAACCACAAAGCATCTGCACCACAAAAG...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCCTCTGTATCTTCCACTaGGAAGTGTCAAAACTACTG +
Preference number: 2 (lower is better)
Translates to: MSPGQELGEAGACKSDRSLCIFH*EVSKLL
Trigger: CAGTAGTTTTGACACTTCCCAGTGGAAGATACAGAG...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCATGAAGATAATGTGCTaGCCTCTCATCATAGTCCCT +
Preference number: 2 (lower is better)
Translates to: MSPGQELGEAGACKSDRSMKIMC*PLIIVP
Trigger: AGGGACTATGATGAGAGGCCAGCACATTATCTTCAT...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCAAACACAAGGGCCCCTaGCCCGACACAATGCCCACA +
Preference number: 2 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCKHKGP*PDTMPT
Trigger: TGTGGGCATTGTGTCGGGCCAGGGGCCCTTGTGTTT...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR TCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATATGGATAGGAGAGCCCTaGGCTATTAGATTGTGGCCC +
Preference number: 2 (lower is better)
Translates to: QLEADVVGSALGSSAHSIWIGEP*AIRLWP
Trigger: GGGCCACAATCTAATAGCTCAGGGCTCTCCTATCCA...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCCATATGAAGATAATGTaGTGGCCTCTCATCATAGTC +
Preference number: 2 (lower is better)
Translates to: MSPGQELGEAGACKSDRSHMKIM*WPLIIV
Trigger: GACTATGATGAGAGGCCAGCACATTATCTTCATATG...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR TCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCGATATTCCATTTATCTaGGTGTTCCCCACAAAACAT +
Preference number: 2 (lower is better)
Translates to: MSPGQELGEAGACKSDRSDIPFI*VFPTKH
Trigger: ATGTTTTGTGGGGAACACTCAGATAAATGGAATATC...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCCCAAAAGAATGGCAATaGAATAGTTTGAAACGCTTG +
Preference number: 2 (lower is better)
Translates to: MSPGQELGEAGACKSDRSPKEWQ*NSLKRL
Trigger: CAAGCGTTTCAAACTATTGCATTGCCATTCTTTTGG...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCCAGGCGATACCAATCTaGATTTATATGTTTACATGG +
Preference number: 2 (lower is better)
Translates to: MSPGQELGEAGACKSDRSQAIPI*IYMFTW
Trigger: CCATGTAAACATATAAATGCAGATTGGTATCGCCTG...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATACAAAACTACTGGCCTTaGGGTAGAAGGAAGACCACC +
Preference number: 2 (lower is better)
Translates to: QLEADVVGSALGSSAHSIQNYWP*GRRKTT
Trigger: GGTGGTCTTCCTTCTACCCCAAGGCCAGTAGTTTTG...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCATTTATATGTTTACATaGGGCAAGGCTGTCCTTCAA +
Preference number: 2 (lower is better)
Translates to: MSPGQELGEAGACKSDRSIYMFT*GKAVLQ
Trigger: TTGAAGGACAGCCTTGCCCCATGTAAACATATAAAT...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCAAGGGAAGAGAGCAGTaGCAGTTGTGTCAATGGGCA +
Preference number: 2 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCKGREQ*QLCQWA
Trigger: TGCCCATTGACACAACTGGCACTGCTCTCTTCCCTT...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTGAGGCCCCCTTTACTTaGAGACTCATCTCTGTCATT +
Preference number: 2 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPEAPFT*RLISVI
Trigger: AATGACAGAGATGAGTCTCCAAGTAAAGGGGGCCTC...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATATGTCTCCAATATTCTTaGCCAAGGACCACCATCTGC +
Preference number: 2 (lower is better)
Translates to: QLEADVVGSALGSSAHSICLQYS*PRTTIC
Trigger: GCAGATGGTGGTCCTTGGCCAAGAATATTGGAGACA...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTTGTCTCCAATATTCTTaGCCAAGGACCACCATCTGC +
Preference number: 2 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPCLQYS*PRTTIC
Trigger: GCAGATGGTGGTCCTTGGCCAAGAATATTGGAGACA...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCCAGAAGTATAAAAACTaGCCCCATTGTAATATCAGT +
Preference number: 2 (lower is better)
Translates to: MSPGQELGEAGACKSDRSQKYKN*PHCNIS
Trigger: ACTGATATTACAATGGGGCCAGTTTTTATACTTCTG...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR TCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACTGGATAGGAGAGCCCTaGGCTATTAGATTGTGGCCC +
Preference number: 2 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNWIGEP*AIRLWP
Trigger: GGGCCACAATCTAATAGCTCAGGGCTCTCCTATCCA...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAAATGGATTCCCTCATTaGGCCACCCCTGAAAGTATC +
Preference number: 2 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPNGFPH*ATPESI
Trigger: GATACTTTCAGGGGTGGCCCAATGAGGGAATCCATT...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCAATGGATTCCCTCATTaGGCCACCCCTGAAAGTATC +
Preference number: 2 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCNGFPH*ATPESI
Trigger: GATACTTTCAGGGGTGGCCCAATGAGGGAATCCATT...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTTTTCTTCCAGTTCAATaGATTCCCTCATTGGGCCAC +
Preference number: 2 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPFLPVQ*IPSLGH
Trigger: GTGGCCCAATGAGGGAATCCATTGAACTGGAAGAAA...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATATTTCTTCCAGTTCAATaGATTCCCTCATTGGGCCAC +
Preference number: 2 (lower is better)
Translates to: QLEADVVGSALGSSAHSIFLPVQ*IPSLGH
Trigger: GTGGCCCAATGAGGGAATCCATTGAACTGGAAGAAA...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCTCTCATCATAGTCCCTaGATACCGTTGCAAGGTTCC +
Preference number: 2 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCSHHSP*IPLQGS
Trigger: GGAACCTTGCAACGGTATCCAGGGACTATGATGAGA...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCATCTCATCATAGTCCCTaGATACCGTTGCAAGGTTCC +
Preference number: 2 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPSHHSP*IPLQGS
Trigger: GGAACCTTGCAACGGTATCCAGGGACTATGATGAGA...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCGAGGCCCCCTTTACTTaGAGACTCATCTCTGTCATT +
Preference number: 2 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCEAPFT*RLISVI
Trigger: AATGACAGAGATGAGTCTCCAAGTAAAGGGGGCCTC...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAGAGGCCCCCTTTACTTaGAGACTCATCTCTGTCATT +
Preference number: 2 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPEAPFT*RLISVI
Trigger: AATGACAGAGATGAGTCTCCAAGTAAAGGGGGCCTC...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAACAGCCACGCAATCCCTaGTGCTCTCAACATGAGAAG +
Preference number: 2 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQQPRNP*CSQHEK
Trigger: CTTCTCATGTTGAGAGCACCAGGGATTGCGTGGCTG...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR TCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTACCCATGCAGAGAAATaGAGAAACATTGTGGTTCCT +
Preference number: 2 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPTHAEK*RNIVVP
Trigger: AGGAACCACAATGTTTCTTCATTTCTCTGCATGGGT...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR TCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCCCCTCTTATACATGCTaGAATATGTTTTCCCAGGGG +
Preference number: 2 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCPSYTC*NMFSQG
Trigger: CCCCTGGGAAAACATATTTCAGCATGTATAAGAGGG...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTCTCCTGACCAACCCATaGAGAGAAATGAAGAAACAT +
Preference number: 2 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPLLTNP*REMKKH
Trigger: ATGTTTCTTCATTTCTCTGCATGGGTTGGTCAGGAG...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCGTCCCTGGATACCGTTaGAAGGTTCCTAATTTGCTT +
Preference number: 2 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCVPGYR*KVPNLL
Trigger: AAGCAAATTAGGAACCTTGCAACGGTATCCAGGGAC...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAAGCTCTAGGATCCTCTaGCCACAGTATACAGTAGAA +
Preference number: 2 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPSSRIL*PQYTVE
Trigger: TTCTACTGTATACTGTGGGCAGAGGATCCTAGAGCT...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACCAAAACTACTGGCCTTaGGGTAGAAGGAAGACCACC +
Preference number: 2 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNQNYWP*GRRKTT
Trigger: GGTGGTCTTCCTTCTACCCCAAGGCCAGTAGTTTTG...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCTTTCTTCCAGTTCAATaGATTCCCTCATTGGGCCAC +
Preference number: 2 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCFLPVQ*IPSLGH
Trigger: GTGGCCCAATGAGGGAATCCATTGAACTGGAAGAAA...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATACTTTGTTGTCATTTTTaGAGGCAAGAGGGCATAGTG +
Preference number: 2 (lower is better)
Translates to: QLEADVVGSALGSSAHSILCCHF*RQEGIV
Trigger: CACTATGCCCTCTTGCCTCCAAAAATGACAACAAAG...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR TCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCACCCATGCAGAGAAATaGAGAAACATTGTGGTTCCT +
Preference number: 2 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCTHAEK*RNIVVP
Trigger: AGGAACCACAATGTTTCTTCATTTCTCTGCATGGGT...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR TCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCTGCTCAAGAAAGAGATaGACTAGTCATACACCATGG +
Preference number: 2 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCCSRKR*TSHTPW
Trigger: CCATGGTGTATGACTAGTTCATCTCTTTCTTGAGCA...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCCTCCTGACCAACCCATaGAGAGAAATGAAGAAACAT +
Preference number: 2 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCLLTNP*REMKKH
Trigger: ATGTTTCTTCATTTCTCTGCATGGGTTGGTCAGGAG...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAACATTTCTGAGTATCTaGCAGGTAGACATACCCAAT +
Preference number: 2 (lower is better)
Translates to: QLEADVVGSALGSSAHSITFLSI*QVDIPN
Trigger: ATTGGGTATGTCTACCTGGCAGATACTCAGAAATGT...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAGCAAGGTTCCTAATTTaGTTGGTTTGGCATTTCCAC +
Preference number: 2 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPARFLI*LVWHFH
Trigger: GTGGAAATGCCAAACCAAGCAAATTAGGAACCTTGC...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATACATATGAAGATAATGTaGTGGCCTCTCATCATAGTC +
Preference number: 2 (lower is better)
Translates to: QLEADVVGSALGSSAHSIHMKIM*WPLIIV
Trigger: GACTATGATGAGAGGCCAGCACATTATCTTCATATG...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAGTGCTACTAATACTATaGAGAAAACCAGGAGCTGCT +
Preference number: 2 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPVLLIL*RKPGAA
Trigger: AGCAGCTCCTGGTTTTCTGCATAGTATTAGTAGCAC...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCGCTGGGGAAAGAAACTaGATTCTCAATTTCAGACAC +
Preference number: 2 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCAGERN*ILNFRH
Trigger: GTGTCTGAAATTGAGAATCCAGTTTCTTTCCCCAGC...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAGCTGGGGAAAGAAACTaGATTCTCAATTTCAGACAC +
Preference number: 2 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPAGERN*ILNFRH
Trigger: GTGTCTGAAATTGAGAATCCAGTTTCTTTCCCCAGC...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACAATGGATTCCCTCATTaGGCCACCCCTGAAAGTATC +
Preference number: 2 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNNGFPH*ATPESI
Trigger: GATACTTTCAGGGGTGGCCCAATGAGGGAATCCATT...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAGATGCTTTGTGGTTCTaGATCTATCCTAGATCAGAG +
Preference number: 2 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPDALWF*IYPRSE
Trigger: CTCTGATCTAGGATAGATCCAGAACCACAAAGCATC...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCCTTTGTTGTCATTTTTaGAGGCAAGAGGGCATAGTG +
Preference number: 2 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCLCCHF*RQEGIV
Trigger: CACTATGCCCTCTTGCCTCCAAAAATGACAACAAAG...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR CAA 90 bp GATCAGTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTaGTACAGGTACAATTCTTTCCCAAGAGCCAAAAGAGGATCCTTG +
Preference number: 2 (lower is better)
Translates to: DQYGMRQSSSHSIIA*YRYNSFPRAKRGSL
Trigger: CAAGGATCCTCTTTTGGCTCTTGGGAAAGAATTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATACTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR TCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTTTTATTTACAACTTTTaGCCCAAGGACCTATCCCTA +
Preference number: 2 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPFIYNF*PKDLSL
Trigger: TAGGGATAGGTCCTTGGGTCAAAAGTTGTAAATAAA...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR TCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAAAGTTTCCTAATTATTaGTGTGAGGCCCCCTTTACT +
Preference number: 2 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPKFPNY*CEAPFT
Trigger: AGTAAAGGGGGCCTCACATCAATAATTAGGAAACTT...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR TCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAGATATTCCATTTATCTaGGTGTTCCCCACAAAACAT +
Preference number: 2 (lower is better)
Translates to: QLEADVVGSALGSSAHSIDIPFI*VFPTKH
Trigger: ATGTTTTGTGGGGAACACTCAGATAAATGGAATATC...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR TCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAAGAGACTATGCAATCTaGTTGTTGGAACGCATAGAA +
Preference number: 2 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPRDYAI*LLERIE
Trigger: TTCTATGCGTTCCAACAATCAGATTGCATAGTCTCT...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR TCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACCCCTCTTATACATGCTaGAATATGTTTTCCCAGGGG +
Preference number: 2 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNPSYTC*NMFSQG
Trigger: CCCCTGGGAAAACATATTTCAGCATGTATAAGAGGG...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR TCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCGGCAATGCAATAGTTTaGAACGCTTGGTTTAGCATT +
Preference number: 2 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCGNAIV*NAWFSI
Trigger: AATGCTAAACCAAGCGTTTCAAACTATTGCATTGCC...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR TCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAACCAAAAGAGGATCCTTaGGAACTAACGGAAAAGCCT +
Preference number: 2 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQPKEDP*ELTEKP
Trigger: AGGCTTTTCCGTTAGTTCTCAAGGATCCTCTTTTGG...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCACATATGAAGATAATGTaGTGGCCTCTCATCATAGTC +
Preference number: 2 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPHMKIM*WPLIIV
Trigger: GACTATGATGAGAGGCCAGCACATTATCTTCATATG...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATATCACAAAAGAGACTATaGAATCTGATTGTTGGAACG +
Preference number: 2 (lower is better)
Translates to: QLEADVVGSALGSSAHSISQKRL*NLIVGT
Trigger: CGTTCCAACAATCAGATTGCATAGTCTCTTTTGTGA...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATATCTGCAAATTTCAATTaGTACAATTGGCCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: QLEADVVGSALGSSAHSISANFN*YNWPLE
Trigger: TTCCAGAGGCCAATTGTAGCAATTGAAATTTGCAGA...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAAAGTGGAACCATATATaGCTACTTTCAGCTAAACCC +
Preference number: 2 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPKWNHI*LLSAKP
Trigger: GGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTT...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCTACACCTTAAGCCTCTaGCTTTTCAGTAAAGTGACT +
Preference number: 2 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCYTLSL*LFSKVT
Trigger: AGTCACTTTACTGAAAAGGCAGAGGCTTAAGGTGTA...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACAAGTGTCAAAACTACTaGCCTTGGGGTAGAAGGAAG +
Preference number: 2 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNKCQNY*PWGRRK
Trigger: CTTCCTTCTACCCCAAGGCCAGTAGTTTTGACACTT...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCTTGCCTTACATTTTCTaGTCCTTCTCTAGCTGTTTC +
Preference number: 2 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCLPYIF*SFSSCF
Trigger: GAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAA...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCATGAAGATAATGTGCTaGCCTCTCATCATAGTCCCT +
Preference number: 2 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLMKIMC*PLIIVP
Trigger: AGGGACTATGATGAGAGGCCAGCACATTATCTTCAT...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAGGATGGATGGATGGATaGATTTACTTGTTCAGAATA +
Preference number: 2 (lower is better)
Translates to: QLEADVVGSALGSSAHSIGWMDG*IYLFRI
Trigger: TATTCTGAACAAGTAAATCCATCCATCCATCCATCC...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCGTTTGGATGGATGGATaGATGGATTTACTTGTTCAG +
Preference number: 2 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCVWMDG*MDLLVQ
Trigger: CTGAACAAGTAAATCCATCCATCCATCCATCCAAAC...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAGCAAGTTTTCCCAAGTaGAACCATATATGCCTACTT +
Preference number: 2 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPASFPK*NHICLL
Trigger: AAGTAGGCATATATGGTTCCACTTGGGAAAACTTGC...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAATCCCAAAAGGGTTCTTaGAGTGCTATGGTTGTAGTC +
Preference number: 2 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQSQKGS*SAMVVV
Trigger: GACTACAACCATAGCACTCCAAGAACCCTTTTGGGA...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR TCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCTATAACCACTTCTCATaGTATAGGGAAAGCTCACTA +
Preference number: 2 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCYNHFS*YRESSL
Trigger: TAGTGAGCTTTCCCTATATCATGAGAAGTGGTTATA...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACCTCCTGACCAACCCATaGAGAGAAATGAAGAAACAT +
Preference number: 2 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNLLTNP*REMKKH
Trigger: ATGTTTCTTCATTTCTCTGCATGGGTTGGTCAGGAG...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAACCAAGGACCACCATCTaGTTTTGGTTTAATGGTGAA +
Preference number: 2 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQPRTTI*FWFNGE
Trigger: TTCACCATTAAACCAAAAGCAGATGGTGGTCCTTGG...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAACTTTTGTGGTGCAGATaGTTTGTGGTTCTGGATCTA +
Preference number: 2 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQLLWCR*FVVLDL
Trigger: TAGATCCAGAACCACAAAGCATCTGCACCACAAAAG...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACGTGCTACTAATACTATaGAGAAAACCAGGAGCTGCT +
Preference number: 2 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNVLLIL*RKPGAA
Trigger: AGCAGCTCCTGGTTTTCTGCATAGTATTAGTAGCAC...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATATATGCACAATCTTCATaGCATGTCTTTCCTTTAGAA +
Preference number: 2 (lower is better)
Translates to: QLEADVVGSALGSSAHSIYAQSS*HVFPLE
Trigger: TTCTAAAGGAAAGACATGGCATGAAGATTGTGCATA...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAACTTCTTGTTTCCAACTaGAGAGAGAACTCAGATCTC +
Preference number: 2 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQLLVSN*RENSDL
Trigger: GAGATCTGAGTTCTCTCTGCAGTTGGAAACAAGAAG...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATCAAAACTACTGGCCTTaGGGTAGAAGGAAGACCACC +
Preference number: 2 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYQNYWP*GRRKTT
Trigger: GGTGGTCTTCCTTCTACCCCAAGGCCAGTAGTTTTG...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTAATGAAGAAACATTGTaGTTCCTCCTATCTTTCTCT +
Preference number: 2 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPNEETL*FLLSFS
Trigger: AGAGAAAGATAGGAGGAACCACAATGTTTCTTCATT...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACGCTGGGGAAAGAAACTaGATTCTCAATTTCAGACAC +
Preference number: 2 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNAGERN*ILNFRH
Trigger: GTGTCTGAAATTGAGAATCCAGTTTCTTTCCCCAGC...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCGGATGGATGGATGGATaGATTTACTTGTTCAGAATA +
Preference number: 2 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCGWMDG*IYLFRI
Trigger: TATTCTGAACAAGTAAATCCATCCATCCATCCATCC...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAGCATTTGGGTCATTTTaGATTATTCCTACATGCATC +
Preference number: 2 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPAFGSF*IIPTCI
Trigger: GATGCATGTAGGAATAATCCAAAATGACCCAAATGC...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATACTTATAGCATTATCGTaGTTCTGTCCAGTTATATAC +
Preference number: 2 (lower is better)
Translates to: QLEADVVGSALGSSAHSILIALS*FCPVIY
Trigger: GTATATAACTGGACAGAACCACGATAATGCTATAAG...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAACTCAGAGATCCACTATaGCTTAAGAAAGGAACAGGA +
Preference number: 2 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQLRDPL*LKKGTG
Trigger: TCCTGTTCCTTTCTTAAGCCATAGTGGATCTCTGAG...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCTCTACCAAGTGTATGTaGACATATGTGAGTTTCAAG +
Preference number: 2 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCSTKCM*TYVSFK
Trigger: CTTGAAACTCACATATGTCCACATACACTTGGTAGA...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR TCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACAGAGACTATGCAATCTaGTTGTTGGAACGCATAGAA +
Preference number: 2 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNRDYAI*LLERIE
Trigger: TTCTATGCGTTCCAACAATCAGATTGCATAGTCTCT...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR TCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAGGTGGTTATCAAAGCTaGATAGCCTTTACCTTTATG +
Preference number: 2 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQGGYQS*IAFTFM
Trigger: CATAAAGGTAAAGGCTATTCAGCTTTGATAACCACC...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCTCACAAAAGAGACTATaGAATCTGATTGTTGGAACG +
Preference number: 2 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLSQKRL*NLIVGT
Trigger: CGTTCCAACAATCAGATTGCATAGTCTCTTTTGTGA...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCTATGCACAATCTTCATaGCATGTCTTTCCTTTAGAA +
Preference number: 2 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCYAQSS*HVFPLE
Trigger: TTCTAAAGGAAAGACATGGCATGAAGATTGTGCATA...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAGTCCAGTTATATACATaGTTTCATGATCACCTTTTC +
Preference number: 2 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPVQLYT*FHDHLF
Trigger: GAAAAGGTGATCATGAAAGCATGTATATAACTGGAC...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAACAGGAGGTATGATTTaGTTTCCTTCACAAAGGCTA +
Preference number: 2 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQTGGMI*FPSQRL
Trigger: TAGCCTTTGTGAAGGAAAGCAAATCATACCTCCTGT...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAATACACCTTAAGCCTCTaGCTTTTCAGTAAAGTGACT +
Preference number: 2 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQYTLSL*LFSKVT
Trigger: AGTCACTTTACTGAAAAGGCAGAGGCTTAAGGTGTA...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAAATGAAGAAACATTGTaGTTCCTCCTATCTTTCTCT +
Preference number: 2 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPNEETL*FLLSFS
Trigger: AGAGAAAGATAGGAGGAACCACAATGTTTCTTCATT...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCACTAATTTGCTTGGTTTaGCATTTCCACAGTCTTTAT +
Preference number: 2 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPLICLV*HFHSLY
Trigger: ATAAAGACTGTGGAAATGCCAAACCAAGCAAATTAG...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATTCTCATCATAGTCCCTaGATACCGTTGCAAGGTTCC +
Preference number: 2 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYSHHSP*IPLQGS
Trigger: GGAACCTTGCAACGGTATCCAGGGACTATGATGAGA...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCCAGAAGTATAAAAACTaGCCCCATTGTAATATCAGT +
Preference number: 2 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCQKYKN*PHCNIS
Trigger: ACTGATATTACAATGGGGCCAGTTTTTATACTTCTG...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR TCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACTTTATTTACAACTTTTaGCCCAAGGACCTATCCCTA +
Preference number: 2 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNFIYNF*PKDLSL
Trigger: TAGGGATAGGTCCTTGGGTCAAAAGTTGTAAATAAA...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR TCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAATTAACAACTAGAAGCTaGTGCACATGGATTTCTCAT +
Preference number: 2 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQLTTRS*CTWISH
Trigger: ATGAGAAATCCATGTGCATCAGCTTCTAGTTGTTAA...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR TCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAACTTACTTGCAAAGCTaGCTGTCAAAGAGTATTTTC +
Preference number: 2 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQTYLQS*LSKSIF
Trigger: GAAAATACTCTTTGACAGTCAGCTTTGCAAGTAAGT...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR TCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAGTATGTGGACATATGTaGGTTTCAAGATTCATCACA +
Preference number: 2 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQVCGHM*VSRFIT
Trigger: TGTGATGAATCTTGAAACTCACATATGTCCACATAC...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACTCACAAAAGAGACTATaGAATCTGATTGTTGGAACG +
Preference number: 2 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNSQKRL*NLIVGT
Trigger: CGTTCCAACAATCAGATTGCATAGTCTCTTTTGTGA...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACTGGATTATTCCTACATaGATCTCTAGGTATTACCCA +
Preference number: 2 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNWIIPT*ISRYYP
Trigger: TGGGTAATACCTAGAGATGCATGTAGGAATAATCCA...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACTCTGCAAATTTCAATTaGTACAATTGGCCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNSANFN*YNWPLE
Trigger: TTCCAGAGGCCAATTGTAGCAATTGAAATTTGCAGA...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATAAGTGTCAAAACTACTaGCCTTGGGGTAGAAGGAAG +
Preference number: 2 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYKCQNY*PWGRRK
Trigger: CTTCCTTCTACCCCAAGGCCAGTAGTTTTGACACTT...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCAATGAAGAAACATTGTaGTTCCTCCTATCTTTCTCT +
Preference number: 2 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLNEETL*FLLSFS
Trigger: AGAGAAAGATAGGAGGAACCACAATGTTTCTTCATT...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCCTAATTTGCTTGGTTTaGCATTTCCACAGTCTTTAT +
Preference number: 2 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLLICLV*HFHSLY
Trigger: ATAAAGACTGTGGAAATGCCAAACCAAGCAAATTAG...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAGCATTTGGGTCATTTTaGATTATTCCTACATGCATC +
Preference number: 2 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQAFGSF*IIPTCI
Trigger: GATGCATGTAGGAATAATCCAAAATGACCCAAATGC...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAGTCCAGTTATATACATaGTTTCATGATCACCTTTTC +
Preference number: 2 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQVQLYT*FHDHLF
Trigger: GAAAAGGTGATCATGAAAGCATGTATATAACTGGAC...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATCTCTGTATCTTCCACTaGGAAGTGTCAAAACTACTG +
Preference number: 2 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYLCIFH*EVSKLL
Trigger: CAGTAGTTTTGACACTTCCCAGTGGAAGATACAGAG...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAACTTATAGCATTATCGTaGTTCTGTCCAGTTATATAC +
Preference number: 2 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQLIALS*FCPVIY
Trigger: GTATATAACTGGACAGAACCACGATAATGCTATAAG...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR TCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATAGAGACTATGCAATCTaGTTGTTGGAACGCATAGAA +
Preference number: 2 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYRDYAI*LLERIE
Trigger: TTCTATGCGTTCCAACAATCAGATTGCATAGTCTCT...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATTGGATTATTCCTACATaGATCTCTAGGTATTACCCA +
Preference number: 2 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYWIIPT*ISRYYP
Trigger: TGGGTAATACCTAGAGATGCATGTAGGAATAATCCA...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR GCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATTCTGCAAATTTCAATTaGTACAATTGGCCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYSANFN*YNWPLE
Trigger: TTCCAGAGGCCAATTGTAGCAATTGAAATTTGCAGA...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATCTAATTTGCTTGGTTTaGCATTTCCACAGTCTTTAT +
Preference number: 2 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYLICLV*HFHSLY
Trigger: ATAAAGACTGTGGAAATGCCAAACCAAGCAAATTAG...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR GCA 72 bp GCCCACACAAACACAAGGGCCCCTGGCCCGACACAATaGCCACAACAGCTTCTTGTTTCCAACTGCAGAGAG +
Preference number: 3 (lower is better)
Translates to: AHTNTRAPGPTQ*PQQLLVSNCRE
Trigger: CTCTCTGCAGTTGGAAACAAGAAGCTGTTGTGGGCATTGTGTCGGGCCAGGGGCCCTTGTGTTTGTGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR GCA 72 bp AAATGCGGTTTCAGCATGCAGCCACGCAATCCCTGGTaGTCTCAACATGAGAAGGAGACACACCAGCCAGGG +
Preference number: 3 (lower is better)
Translates to: KCGFSMQPRNPW*SQHEKETHQPG
Trigger: CCCTGGCTGGTGTGTCTCCTTCTCATGTTGAGAGCACCAGGGATTGCGTGGCTGCATGCTGAAACCGCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR CCA 72 bp GGAAAATGCGGTTTCAGCATGCAGCCACGCAATCCCTaGTGCTCTCAACATGAGAAGGAGACACACCAGCCA +
Preference number: 3 (lower is better)
Translates to: GKCGFSMQPRNP*CSQHEKETHQP
Trigger: TGGCTGGTGTGTCTCCTTCTCATGTTGAGAGCACCAGGGATTGCGTGGCTGCATGCTGAAACCGCATTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR GCA 72 bp ACACACCAGCCAGGGAGACAGGCATTCAAAGTTAGCTaGCCTCACACAGCTGCTCCGTTTAATAATCGACCC +
Preference number: 3 (lower is better)
Translates to: THQPGRQAFKVS*PHTAAPFNNRP
Trigger: GGGTCGATTATTAAACGGAGCAGCTGTGTGAGGGCAGCTAACTTTGAATGCCTGTCTCCCTGGCTGGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCTGCAAGGTTCCTAATTaGCTTGGTTTGGCATTTCCA +
Preference number: 3 (lower is better)
Translates to: MSPGQELGEAGACKSDRSCKVPN*LGLAFP
Trigger: TGGAAATGCCAAACCAAGCAAATTAGGAACCTTGCA...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR GCA 72 bp ACTAGTCATACACCATGGGAAAATGCGGTTTCAGCATaGAGCCACGCAATCCCTGGTGCTCTCAACATGAGA +
Preference number: 3 (lower is better)
Translates to: TSHTPWENAVSA*SHAIPGALNMR
Trigger: TCTCATGTTGAGAGCACCAGGGATTGCGTGGCTGCATGCTGAAACCGCATTTTCCCATGGTGTATGACTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCACTCATCTCTGTCATTaGTTCTCATCCTTCATCTCA +
Preference number: 3 (lower is better)
Translates to: MSPGQELGEAGACKSDRSTHLCH*FSSFIS
Trigger: TGAGATGAAGGATGAGAACAAATGACAGAGATGAGT...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCAGCATTTGGGTCATTTaGGATTATTCCTACATGCAT +
Preference number: 3 (lower is better)
Translates to: MSPGQELGEAGACKSDRSSIWVI*DYSYMH
Trigger: ATGCATGTAGGAATAATCCAAAATGACCCAAATGCT...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR TCA 72 bp TTTCCTAGAGACTTCTCTGAATGGATAGGAGAGCCCTaGGCTATTAGATTGTGGCCCCTGAATCACTCTGTG +
Preference number: 3 (lower is better)
Translates to: FPRDFSEWIGEP*AIRLWPLNHSV
Trigger: CACAGAGTGATTCAGGGGCCACAATCTAATAGCTCAGGGCTCTCCTATCCATTCAGAGAAGTCTCTAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR GCA 72 bp ATGTGCTGGCCTCTCATCATAGTCCCTGGATACCGTTaGAAGGTTCCTAATTTGCTTGGTTTGGCATTTCCA +
Preference number: 3 (lower is better)
Translates to: MCWPLIIVPGYR*KVPNLLGLAFP
Trigger: TGGAAATGCCAAACCAAGCAAATTAGGAACCTTGCAACGGTATCCAGGGACTATGATGAGAGGCCAGCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR CCA 72 bp ATCTCTGTATCTTCCACTGGGAAGTGTCAAAACTACTaGCCTTGGGGTAGAAGGAAGACCACCAGAGAAAGA +
Preference number: 3 (lower is better)
Translates to: ISVSSTGKCQNY*PWGRRKTTRER
Trigger: TCTTTCTCTGGTGGTCTTCCTTCTACCCCAAGGCCAGTAGTTTTGACACTTCCCAGTGGAAGATACAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAGTTGGCCATTCTTACTaGCTAGGACAGAAACTGCTG +
Preference number: 3 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPVGHSY*LGQKLL
Trigger: CAGCAGTTTCTGTCCTAGCAAGTAAGAATGGCCAAC...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAATGTCTCCAATATTCTaGGCCAAGGACCACCATCTG +
Preference number: 3 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPMSPIF*AKDHHL
Trigger: CAGATGGTGGTCCTTGGCCAAGAATATTGGAGACAT...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR CCA 72 bp CCAGTGTGTTTCTTCCAGTTCAATGGATTCCCTCATTaGGCCACCCCTGAAAGTATCAGTAGTTTTCCTGAA +
Preference number: 3 (lower is better)
Translates to: PVCFFQFNGFPH*ATPESISSFPE
Trigger: TTCAGGAAAACTACTGATACTTTCAGGGGTGGCCCAATGAGGGAATCCATTGAACTGGAAGAAACACACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR CCA 72 bp TCTAACACCTTTTGTGGTGCAGATGCTTTGTGGTTCTaGATCTATCCTAGATCAGAGGCCATCTTTCCTCAC +
Preference number: 3 (lower is better)
Translates to: SNTFCGADALWF*IYPRSEAIFPH
Trigger: GTGAGGAAAGATGGCCTCTGATCTAGGATAGATCCAGAACCACAAAGCATCTGCACCACAAAAGGTGTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCGTTGGCCATTCTTACTaGCTAGGACAGAAACTGCTG +
Preference number: 3 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLVGHSY*LGQKLL
Trigger: CAGCAGTTTCTGTCCTAGCAAGTAAGAATGGCCAAC...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCATGTCTCCAATATTCTaGGCCAAGGACCACCATCTG +
Preference number: 3 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLMSPIF*AKDHHL
Trigger: CAGATGGTGGTCCTTGGCCAAGAATATTGGAGACAT...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCATCCCAAAAGGGTTCTaGGAGTGCTATGGTTGTAGT +
Preference number: 3 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCIPKGF*ECYGCS
Trigger: ACTACAACCATAGCACTCCAAGAACCCTTTTGGGAT...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR TCA 72 bp TTATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTaGTACACACCGAAGTCCATGTACACAAACAGAGGC +
Preference number: 3 (lower is better)
Translates to: LYVYMGQGCPSN*YTPKSMYTNRG
Trigger: GCCTCTGTTTGTGTACATGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR CCA 72 bp AACCAGGCGATACCAATCTGCATTTATATGTTTACATaGGGCAAGGCTGTCCTTCAAACTGATACACACCGA +
Preference number: 3 (lower is better)
Translates to: NQAIPICIYMFT*GKAVLQTDTHR
Trigger: TCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATAAATGCAGATTGGTATCGCCTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATACCTAATTTGCTTGGTTaGGCATTTCCACAGTCTTTA +
Preference number: 3 (lower is better)
Translates to: QLEADVVGSALGSSAHSIPNLLG*AFPQSL
Trigger: TAAAGACTGTGGAAATGCCAAACCAAGCAAATTAGG...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCAGGTTCCTAATTTGCTaGGTTTGGCATTTCCACAGT +
Preference number: 3 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCRFLIC*VWHFHS
Trigger: ACTGTGGAAATGCCAAACCAAGCAAATTAGGAACCT...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAACTCATCTCTGTCATTaGTTCTCATCCTTCATCTCA +
Preference number: 3 (lower is better)
Translates to: QLEADVVGSALGSSAHSITHLCH*FSSFIS
Trigger: TGAGATGAAGGATGAGAACAAATGACAGAGATGAGT...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAAGAAATGAAGAAACATaGTGGTTCCTCCTATCTTTC +
Preference number: 3 (lower is better)
Translates to: QLEADVVGSALGSSAHSIRNEET*WFLLSF
Trigger: GAAAGATAGGAGGAACCACAATGTTTCTTCATTTCT...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCACCTAATTTGCTTGGTTaGGCATTTCCACAGTCTTTA +
Preference number: 3 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPPNLLG*AFPQSL
Trigger: TAAAGACTGTGGAAATGCCAAACCAAGCAAATTAGG...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCTGCAAGGTTCCTAATTaGCTTGGTTTGGCATTTCCA +
Preference number: 3 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLCKVPN*LGLAFP
Trigger: TGGAAATGCCAAACCAAGCAAATTAGGAACCTTGCA...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCACTGAACAAATTTCCTaGCGTAGCAAAGGTGACATA +
Preference number: 3 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCTEQIS*RSKGDI
Trigger: TATGTCACCTTTGCTACGCAAGGAAATTTGTTCAGT...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTATTTATTTACAACTTTaGACCCAAGGACCTATCCCT +
Preference number: 3 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPIYLQL*TQGPIP
Trigger: AGGGATAGGTCCTTGGGTCAAAAGTTGTAAATAAAT...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAATTTATTTACAACTTTaGACCCAAGGACCTATCCCT +
Preference number: 3 (lower is better)
Translates to: QLEADVVGSALGSSAHSIIYLQL*TQGPIP
Trigger: AGGGATAGGTCCTTGGGTCAAAAGTTGTAAATAAAT...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCACTCATCTCTGTCATTaGTTCTCATCCTTCATCTCA +
Preference number: 3 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCTHLCH*FSSFIS
Trigger: TGAGATGAAGGATGAGAACAAATGACAGAGATGAGT...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAAGCATTTGGGTCATTTaGGATTATTCCTACATGCAT +
Preference number: 3 (lower is better)
Translates to: QLEADVVGSALGSSAHSISIWVI*DYSYMH
Trigger: ATGCATGTAGGAATAATCCAAAATGACCCAAATGCT...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCATTCTGCAAATTTCAATaGCTACAATTGGCCTCTGGA +
Preference number: 3 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPFCKFQ*LQLASG
Trigger: TCCAGAGGCCAATTGTAGCAATTGAAATTTGCAGAA...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCTTCTGCAAATTTCAATaGCTACAATTGGCCTCTGGA +
Preference number: 3 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCFCKFQ*LQLASG
Trigger: TCCAGAGGCCAATTGTAGCAATTGAAATTTGCAGAA...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCGGACAAGTTAGACTATaGCCTACAGGTATGAATCTT +
Preference number: 3 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCGQVRL*PTGMNL
Trigger: AAGATTCATACCTGTAGGCAATAGTCTAACTTGTCC...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR TCA 72 bp TTTGAAAACCAGATTCGTGTCAATATACAGGAGGTATaGTTTGCTTTCCTTCACAAAGGCTATAGGCCTGGG +
Preference number: 3 (lower is better)
Translates to: FENQIRVNIQEV*FAFLHKGYRPG
Trigger: CCCAGGCCTATAGCCTTTGTGAAGGAAAGCAAATCATACCTCCTGTATATTGACACGAATCTGGTTTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR TCA 72 bp ATTGGCATATCCTATTGTGTAAGCGAGTGCAGAGGTTaGACACATCACAATAGTGCTGAACACAGAATCACA +
Preference number: 3 (lower is better)
Translates to: IGISYCVSECRG*THHNSAEHRIT
Trigger: TGTGATTCTGTGTTCAGCACTATTGTGATGTGTTCAACCTCTGCACTCGCTTACACAATAGGATATGCCAAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR GCA 72 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTaGCTTGTACAGGTACAATTCTTTCCCAAGAGCCAA +
Preference number: 3 (lower is better)
Translates to: VWNEAKQFAFYN*LVQVQFFPKSQ
Trigger: TTGGCTCTTGGGAAAGAATTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCCTGGTTGCTTCCATATaGCTTGATTCAAAATCCAAA +
Preference number: 3 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCLVASI*LDSKSK
Trigger: TTTGGATTTTGAATCAAGCAATATGGAAGCAACCAG...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAAGGTTCCTAATTTGCTaGGTTTGGCATTTCCACAGT +
Preference number: 3 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQRFLIC*VWHFHS
Trigger: ACTGTGGAAATGCCAAACCAAGCAAATTAGGAACCT...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCACTGAACAAATTTCCTaGCGTAGCAAAGGTGACATA +
Preference number: 3 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLTEQIS*RSKGDI
Trigger: TATGTCACCTTTGCTACGCAAGGAAATTTGTTCAGT...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCTCTCTATGCGGTAGTTaGATAGTTCACTTAAACAGT +
Preference number: 3 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCSLCGS*IVHLNS
Trigger: ACTGTTTAAGTGAACTATCAAACTACCGCATAGAGA...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAACACAAGAGAGAGGGCTaGTTTTCTGCTTACAAGTTA +
Preference number: 3 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQHKREG*FSAYKL
Trigger: TAACTTGTAAGCAGAAAACAAGCCCTCTCTCTTGTG...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAACTGAACAAATTTCCTaGCGTAGCAAAGGTGACATA +
Preference number: 3 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQTEQIS*RSKGDI
Trigger: TATGTCACCTTTGCTACGCAAGGAAATTTGTTCAGT...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATATGTCTCCAATATTCTaGGCCAAGGACCACCATCTG +
Preference number: 3 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYMSPIF*AKDHHL
Trigger: CAGATGGTGGTCCTTGGCCAAGAATATTGGAGACAT...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR TCA 72 bp AGAAAAGGGCGACTTATATCTAAGTTTCCTAATTATTaGTGTGAGGCCCCCTTTACTTGGAGACTCATCTCT +
Preference number: 3 (lower is better)
Translates to: RKGRLISKFPNY*CEAPFTWRLIS
Trigger: AGAGATGAGTCTCCAAGTAAAGGGGGCCTCACATCAATAATTAGGAAACTTAGATATAAGTCGCCCTTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACAGAAATGAAGAAACATaGTGGTTCCTCCTATCTTTC +
Preference number: 3 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNRNEET*WFLLSF
Trigger: GAAAGATAGGAGGAACCACAATGTTTCTTCATTTCT...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAATTTATTTACAACTTTaGACCCAAGGACCTATCCCT +
Preference number: 3 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQIYLQL*TQGPIP
Trigger: AGGGATAGGTCCTTGGGTCAAAAGTTGTAAATAAAT...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAAGCATTTGGGTCATTTaGGATTATTCCTACATGCAT +
Preference number: 3 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQSIWVI*DYSYMH
Trigger: ATGCATGTAGGAATAATCCAAAATGACCCAAATGCT...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR TCA 72 bp TTGATTCCTAACAAGGTAATCACTTACTTGCAAAGCTaGCTGTCAAAGAGTATTTTCCAGAGGAAGCATGTG +
Preference number: 3 (lower is better)
Translates to: LIPNKVITYLQS*LSKSIFQRKHV
Trigger: CACATGCTTCCTCTGGAAAATACTCTTTGACAGTCAGCTTTGCAAGTAAGTGATTACCTTGTTAGGAATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR GCA 72 bp CCTTCTTACGAAGTATACGAACTGAACAAATTTCCTTaGGTAGCAAAGGTGACATATGAAGATAATGTGCTG +
Preference number: 3 (lower is better)
Translates to: PSYEVYELNKFP*VAKVTYEDNVL
Trigger: CAGCACATTATCTTCATATGTCACCTTTGCTACGCAAGGAAATTTGTTCAGTTCGTATACTTCGTAAGAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR-3UTR CAA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATTGCAAGGTTCCTAATTaGCTTGGTTTGGCATTTCCA +
Preference number: 3 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYCKVPN*LGLAFP
Trigger: TGGAAATGCCAAACCAAGCAAATTAGGAACCTTGCA...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR TCA 72 bp GGTACAATTCTTTCCCAAGAGCCAAAAGAGGATCCTTaGGAACTAACGGAAAAGCCTAATTACATAAATGTA +
Preference number: 3 (lower is better)
Translates to: GTILSQEPKEDP*ELTEKPNYINV
Trigger: TACATTTATGTAATTAGGCTTTTCCGTTAGTTCTCAAGGATCCTCTTTTGGCTCTTGGGAAAGAATTGTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR TCA 72 bp GACAGATCCTACATTTTTGGACCTCTACAAAATCAGTaGGACTTGAACCGAGTATCTGAAATTTCTATTATT +
Preference number: 3 (lower is better)
Translates to: DRSYIFGPLQNQ*DLNRVSEISII
Trigger: AATAATAGAAATTTCAGATACTCGGTTCAAGTCTCACTGATTTTGTAGAGGTCCAAAAATGTAGGATCTGTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCCTGGGTGCTGAAGGGTaGTCCGAGGTGGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSLGAEG*SEVAGC
Trigger: ACAGCCTGCCACCTCGGAGCACCCTTCAGCACCCAG...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCTCGTGGGCTCCGTTCTaGGGCAAACACGGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSSWAPF*GKHGGV
Trigger: GACCCCACCGTGTTTGCCCCAGAACGGAGCCCACGA...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCCCGGTGTCTGTAAGGTaGAGGCGGCAGCACAGTGCC +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSPVSVR*RRQHSA
Trigger: GGCACTGTGCTGCCGCCTCCACCTTACAGACACCGG...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCTCAGGACCCGGTCCATaGCATGTGAGGAGGCCATCT +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSSGPGP*HVRRPS
Trigger: AGATGGCCTCCTCACATGCCATGGACCGGGTCCTGA...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCTGGGAGGTGGGATGTTaGAAGCCTGAGGGACCAAGT +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSWEVGC*KPEGPS
Trigger: ACTTGGTCCCTCAGGCTTTCAACATCCCACCTCCCA...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCCGCAAGGCTCGGTACTaGTGTTCCAGGTCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSRKARY*CSRSER
Trigger: TCTCTCTGACCTGGAACAGCAGTACCGAGCCTTGCG...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCCTAACACGTAGCCTGTaGCTTCTCGAACAGACCGCA +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSLTRSL*LLEQTA
Trigger: TGCGGTCTGTTCGAGAAGTCACAGGCTACGTGTTAG...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCGTCTCGAGCCATCCTTaGAAACTCAGCAGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSVSSHP*KLSSQF
Trigger: GAACTGGCTGCTGAGTTTTCAAGGATGGCTCGAGAC...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCTGGATAGGAGAGCCCTaGGCTATTAGATTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSWIGEP*AIRLWP
Trigger: GGGCCACAATCTAATAGCTCAGGGCTCTCCTATCCA...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCCCCGGTTGTGCTCAATaGTGGTTATCTCCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSPGCAQ*WLSPGC
Trigger: GCAACCTGGAGATAACCAGCATTGAGCACAACCGGG...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCCGTTACACCCTTGGGTaGAGTTTGGATGGCATGGGT +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSRYTLG*SLDGMG
Trigger: ACCCATGCCATCCAAACTGCACCCAAGGGTGTAACG...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCAGCAGTAGCACCCTGTaGCACAGGAGCTTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSSSSTL*HRSFWN
Trigger: ATTCCAGAAGCTCCTGTGGCACAGGGTGCTACTGCT...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCAATGCGGTTTCAGCATaGAGCCACGCAATCCCTGGT +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSNAVSA*SHAIPG
Trigger: ACCAGGGATTGCGTGGCTGCATGCTGAAACCGCATT...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCTGGGTGCTGTGCCACTaGGAGTTAATGGTTCCACCA +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSWVLCH*ELMVPP
Trigger: TGGTGGAACCATTAACTCCCAGTGGCACAGCACCCA...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCGAAGTTGAGCTTGATTaGGTGCTGTGCCACTGGGAG +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSEVELD*VLCHWE
Trigger: CTCCCAGTGGCACAGCACCCAATCAAGCTCAACTTC...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTCTCGGTGTGTGCGCTTaGCGCTCTGGGCCGGACTGT +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPLGVCA*RSGPDC
Trigger: ACAGTCCGGCCCAGAGCGCCAAGCGCACACACCGAG...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342788.9
ENST00000436443.5
CDS-3UTR CCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCTCAGCACTGTACCTCTaGGTGCTACTGTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSSALYL*VLLSSW
Trigger: CCAAGAGGACAGTAGCACCCAGAGGTACAGTGCTGA...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCCAGCCACGCAATCCCTaGTGCTCTCAACATGAGAAG +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSQPRNP*CSQHEK
Trigger: CTTCTCATGTTGAGAGCACCAGGGATTGCGTGGCTG...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTTCGTGGGCTCCGTTCTaGGGCAAACACGGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPSWAPF*GKHGGV
Trigger: GACCCCACCGTGTTTGCCCCAGAACGGAGCCCACGA...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATACCGGTGTCTGTAAGGTaGAGGCGGCAGCACAGTGCC +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIPVSVR*RRQHSA
Trigger: GGCACTGTGCTGCCGCCTCCACCTTACAGACACCGG...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTCCTGCACACACTGACTaGGAATCGCTGGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPPAHTD*ESLGWT
Trigger: CGTCCAGCCCAGCGATTCTCAGTCAGTGTGTGCAGG...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342788.9
ENST00000436443.5
CDS-3UTR TCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCTGTTGGCAAAGGTGTTaGGGTACAGTGGCTCATTCA +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSCWQRC*GTVAHS
Trigger: TGAATGAGCCACTGTACCTCAACACCTTTGCCAACA...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCGGCCTTCTCTGGCATTaGCAGTATGTTGTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSGLLWH*QYVVLQ
Trigger: CTGAAGAACAACATACTGTCAATGCCAGAGAAGGCC...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCGCCTTTTCAGTAAAGTaGCTCCCTCTCTCACCCAAA +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSAFSVK*LPLSPK
Trigger: TTTGGGTGAGAGAGGGAGTCACTTTACTGAAAAGGC...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCCTTGATTGGGTGCTGTaGCACTGGGAGTTAATGGTT +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSLDWVL*HWELMV
Trigger: AACCATTAACTCCCAGTGGCACAGCACCCAATCAAG...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTGGGGTGCCACTGGCTTaGGTAGGGTGCCATTACAGC +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPGVPLA*VGCHYS
Trigger: GCTGTAATGGCACCCTACGCAAGCCAGTGGCACCCC...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCACTGGGTGCTGAAGGGTaGTCCGAGGTGGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPLGAEG*SEVAGC
Trigger: ACAGCCTGCCACCTCGGAGCACCCTTCAGCACCCAG...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCCTGACTGAGAATCGCTaGGCTGGACGGTCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLLTENR*AGRSPP
Trigger: CGGCGGGGACCGTCCAGCCCAGCGATTCTCAGTCAG...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342788.9
ENST00000436443.5
CDS-3UTR CCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCCCAGTACAGGACTTATaGCAACGTCCACATCCTGAA +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSPVQDL*QRPHPE
Trigger: TTCAGGATGTGGACGTTGCCATAAGTCCTGTACTGG...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCAATGGATTCCCTCATTaGGCCACCCCTGAAAGTATC +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSNGFPH*ATPESI
Trigger: GATACTTTCAGGGGTGGCCCAATGAGGGAATCCATT...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAGTGCGCTTGGCGCTCTaGGCCGGACTGTGCAGCTAT +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPVRLAL*AGLCSY
Trigger: ATAGCTGCACAGTCCGGCCCAGAGCGCCAAGCGCAC...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436443.5
CDS-3UTR TCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCTCTCAGATCCCGTGCTaGCAATTACATGTCCAAATG +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSSQIPC*QLHVQM
Trigger: CATTTGGACATGTAATTGTCAGCACGGGATCTGAGA...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342788.9
ENST00000436443.5
CDS-3UTR TCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATATGGCCAGGAATTAGGTaGGGCAGGGGCCTGCAAAAG +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIWPGIR*GRGLQK
Trigger: CTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCA...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCCCAATGTTATCCTTGTaGTCGTGGACATACTCCAAC +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSPMLSL*SWTYSN
Trigger: GTTGGAGTATGTCCACGAGCACAAGGATAACATTGG...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAGGGGTGCCACTGGCTTaGGTAGGGTGCCATTACAGC +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPGVPLA*VGCHYS
Trigger: GCTGTAATGGCACCCTACGCAAGCCAGTGGCACCCC...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCACGACAGACATTGGTCTaGCCCAGGTCCCCAACAGCC +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPRQTLV*PRSPTA
Trigger: GGCTGTTGGGGACCTGGGCCAGACCAATGTCTGTCG...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTCGACACGACAGACATTaGTCTGGCCCAGGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPRHDRH*SGPGPQ
Trigger: TTGGGGACCTGGGCCAGACCAATGTCTGTCGTGTCG...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATATCAGGACCCGGTCCATaGCATGTGAGGAGGCCATCT +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSISGPGP*HVRRPS
Trigger: AGATGGCCTCCTCACATGCCATGGACCGGGTCCTGA...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTCCCTTGGGTGCAGTTTaGATGGCATGGGTGGCACTC +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPPLGAV*MAWVAL
Trigger: GAGTGCCACCCATGCCATCCAAACTGCACCCAAGGG...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCGCGTGTGTGCGCGTGTaGGAGTGTGCTCGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLACVRV*ECARCV
Trigger: CACACACCGAGCACACTCCCACACGCGCACACACGC...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342788.9
ENST00000436443.5
CDS-3UTR CCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCAATTACATGTCCAAATaGCATATCCCCCTTTCGGGC +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSNYMSK*HIPLSG
Trigger: GCCCGAAAGGGGGATATGCCATTTGGACATGTAATT...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342788.9
ENST00000436443.5
CDS-3UTR CCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCGAACTTGCTGTCATTTaGACTGGGAAGCTTCATACG +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSELAVI*TGKLHT
Trigger: CGTATGAAGCTTCCCAGTCCAAATGACAGCAAGTTC...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTGTGCTACTGTCCTCTTaGACATGGGGTGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPVLLSS*TWGATG
Trigger: GCCAGTGGCACCCCATGTCCAAGAGGACAGTAGCAC...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCACTCCTGCAGGTAGTCTaGGTGCTGAAGGGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPLLQVV*VLKGAP
Trigger: CGGAGCACCCTTCAGCACCCAGACTACCTGCAGGAG...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCCCGGTGTCTGTAAGGTaGAGGCGGCAGCACAGTGCC +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLPVSVR*RRQHSA
Trigger: GGCACTGTGCTGCCGCCTCCACCTTACAGACACCGG...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCCCTGCACACACTGACTaGGAATCGCTGGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFPAHTD*ESLGWT
Trigger: CGTCCAGCCCAGCGATTCTCAGTCAGTGTGTGCAGG...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342788.9
ENST00000436443.5
CDS-3UTR TCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAGATGGCAGCAGTCACTaGCGTAAGGTCCGTAGCATC +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIDGSSH*RKVRSI
Trigger: GATGCTACGGACCTTACGTCAGTGACTGCTGCCATC...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATATGTGTCCTTAGGTCCTaGGCAGCCTCCAGCACATTC +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSICVLRS*AASSTF
Trigger: GAATGTGCTGGAGGCTGCTCAGGACCTAAGGACACA...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCCTAGCCCAAAATCTGTaGTTTTCACATGGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSLAQNL*FSHGLE
Trigger: CTCCAAACCATGTGAAAATCACAGATTTTGGGCTAG...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTGTGCAGATGGGAGGCTaGGGCAAACGTTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPVQMGG*GKRSPF
Trigger: GAAAGGAGAACGTTTGCCTCAGCCTCCCATCTGCAC...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCTGGCCAGGAATTAGGTaGGGCAGGGGCCTGCAAAAG +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCWPGIR*GRGLQK
Trigger: CTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCA...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCATGATCAGTATGGAATaGGGCAAAGCAGTTCGCATT +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSMISME*GKAVRI
Trigger: AATGCGAACTGCTTTGCCTCATTCCATACTGATCAT...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTCGCAAGGCTCGGTACTaGTGTTCCAGGTCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPRKARY*CSRSER
Trigger: TCTCTCTGACCTGGAACAGCAGTACCGAGCCTTGCG...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCACATCAATGATCCTGTaGCAATGCCATCACAAGCTT +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSTSMIL*QCHHKL
Trigger: AAGCTTGTGATGGCATTGGCACAGGATCATTGATGT...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCCTCCTGACCAACCCATaGAGAGAAATGAAGAAACAT +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSLLTNP*REMKKH
Trigger: ATGTTTCTTCATTTCTCTGCATGGGTTGGTCAGGAG...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCGTGCTACTAATACTATaGAGAAAACCAGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSVLLIL*RKPGAA
Trigger: AGCAGCTCCTGGTTTTCTGCATAGTATTAGTAGCAC...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAGGTGAGGCAGGGGCCTaGAAAAGTGACAGATCCTAC +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIGEAGA*KSDRSY
Trigger: GTAGGATCTGTCACTTTTGCAGGCCCCTGCCTCACC...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCCGACAGACATTGGTCTaGCCCAGGTCCCCAACAGCC +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLRQTLV*PRSPTA
Trigger: GGCTGTTGGGGACCTGGGCCAGACCAATGTCTGTCG...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCACTGTCCTCTTGGACATaGGGTGCCACTGGCTTGCGT +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPLSSWT*GATGLR
Trigger: ACGCAAGCCAGTGGCACCCCATGTCCAAGAGGACAG...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCCTGTCCTCTTGGACATaGGGTGCCACTGGCTTGCGT +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCLSSWT*GATGLR
Trigger: ACGCAAGCCAGTGGCACCCCATGTCCAAGAGGACAG...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCGTGCTACTGTCCTCTTaGACATGGGGTGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCVLLSS*TWGATG
Trigger: GCCAGTGGCACCCCATGTCCAAGAGGACAGTAGCAC...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCATCCAGCTCTCCTCGTaGGCTCCGTTCTGGGGCAAA +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCIQLSS*APFWGK
Trigger: TTTGCCCCAGAACGGAGCCCACGAGGAGAGCTGGAT...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCCCGGTCCATGGCATGTaGGGAGGCCATCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLPVHGM*GGHLPS
Trigger: AGATGGAAGATGGCCTCCTCACATGCCATGGACCGG...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAATCGGGGGACTACTTTaGACCAGGGTGGTAGAAAGG +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIIGGLL*TRVVER
Trigger: CCTTTCTACCACCCTGGTTCAAAGTAGTCCCCCGAT...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCAAGGACACAGAGAATTaGTCTTCATGGGAAACCATA +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSKDTEN*SSWETI
Trigger: TATGGTTTCCCATGAAGATCAATTCTCTGTGTCCTT...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCCTGGTGCTCTCAACATaGGAAGGAGACACACCAGCC +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCLVLST*EGDTPA
Trigger: GGCTGGTGTGTCTCCTTCTCATGTTGAGAGCACCAG...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTCCCGGTTGTGCTCAATaGTGGTTATCTCCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPPGCAQ*WLSPGC
Trigger: GCAACCTGGAGATAACCAGCATTGAGCACAACCGGG...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCATTCGAGTCAATTCTTaGTCTGGAAGTATAGATGGG +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSIRVNS*SGSIDG
Trigger: CCCATCTATACTTCCAGAGCAAGAATTGACTCGAAT...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAAGCAGTAGCACCCTGTaGCACAGGAGCTTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSISSSTL*HRSFWN
Trigger: ATTCCAGAAGCTCCTGTGGCACAGGGTGCTACTGCT...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAAATGCGGTTTCAGCATaGAGCCACGCAATCCCTGGT +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSINAVSA*SHAIPG
Trigger: ACCAGGGATTGCGTGGCTGCATGCTGAAACCGCATT...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCCAGTTGAAAGGTGGTTaGATTGTAGACAAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSQLKGG*IVDKGL
Trigger: CAAACCTTTGTCTACAATCCAACCACCTTTCAACTG...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCCGGATTACTATTCTCTaGTTGATTGTGCTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSRITIL*LIVLKS
Trigger: ACTCTTCAGCACAATCAACCAGAGAATAGTAATCCG...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACCGACAGACATTGGTCTaGCCCAGGTCCCCAACAGCC +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNRQTLV*PRSPTA
Trigger: GGCTGTTGGGGACCTGGGCCAGACCAATGTCTGTCG...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTTCCATCTTCTCACACTaGGGGTCACACTCCACACAG +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPSIFSH*GSHSTQ
Trigger: CTGTGTGGAGTGTGACCCCCAGTGTGAGAAGATGGA...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCTCAGGACCCGGTCCATaGCATGTGAGGAGGCCATCT +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFSGPGP*HVRRPS
Trigger: AGATGGCCTCCTCACATGCCATGGACCGGGTCCTGA...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTTTTGGATGGCATGGGTaGCACTCCCGATCTGGATCA +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPFGWHG*HSRSGS
Trigger: TGATCCAGATCGGGAGTGCCACCCATGCCATCCAAA...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCGCAGTTTGGATGGCATaGGTGGCACTCCCGATCTGG +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLAVWMA*VALPIW
Trigger: CCAGATCGGGAGTGCCACCCATGCCATCCAAACTGC...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCGCAGTTTGGATGGCATaGGTGGCACTCCCGATCTGG +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFAVWMA*VALPIW
Trigger: CCAGATCGGGAGTGCCACCCATGCCATCCAAACTGC...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCCCCTTGGGTGCAGTTTaGATGGCATGGGTGGCACTC +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFPLGAV*MAWVAL
Trigger: GAGTGCCACCCATGCCATCCAAACTGCACCCAAGGG...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATATGGGTGCTGTGCCACTaGGAGTTAATGGTTCCACCA +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIWVLCH*ELMVPP
Trigger: TGGTGGAACCATTAACTCCCAGTGGCACAGCACCCA...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAAACCAGCTGGATGGTTaGGCTCAGACACACACCCAG +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPNQLDG*AQTHTQ
Trigger: CTGGGTGTGTGTCTGAGCCCAACCATCCAGCTGGTT...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTTGCCACAGGAGCTTCTaGAATTGTGCTAGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPCHRSF*NCASWG
Trigger: GCCCCAACTAGCACAATTCCAGAAGCTCCTGTGGCA...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCCTGTCCTCTTGGACATaGGGTGCCACTGGCTTGCGT +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLLSSWT*GATGLR
Trigger: ACGCAAGCCAGTGGCACCCCATGTCCAAGAGGACAG...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTACTCATCCTCGGCCTTaGGTGGACCATTGGATGCAT +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPTHPRP*VDHWMH
Trigger: ATGCATCCAATGGTCCACCCAAGGCCGAGGATGAGT...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACCTCCTGCAGGTAGTCTaGGTGCTGAAGGGTGCTCCG +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNLLQVV*VLKGAP
Trigger: CGGAGCACCCTTCAGCACCCAGACTACCTGCAGGAG...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCTTGCCTTACATTTTCTaGTCCTTCTCTAGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSLPYIF*SFSSCF
Trigger: GAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAA...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCGTTTGGATGGATGGATaGATGGATTTACTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSVWMDG*MDLLVQ
Trigger: CTGAACAAGTAAATCCATCCATCCATCCATCCAAAC...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCGCAAGTTTTCCCAAGTaGAACCATATATGCCTACTT +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSASFPK*NHICLL
Trigger: AAGTAGGCATATATGGTTCCACTTGGGAAAACTTGC...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCGATGGCAGCAGTCACTaGCGTAAGGTCCGTAGCATC +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFDGSSH*RKVRSI
Trigger: GATGCTACGGACCTTACGTCAGTGACTGCTGCCATC...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCTGTGTCCTTAGGTCCTaGGCAGCCTCCAGCACATTC +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLCVLRS*AASSTF
Trigger: GAATGTGCTGGAGGCTGCTCAGGACCTAAGGACACA...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCAGATCCTTCCTCTACTaGAGCGGCGACACGACAGAC +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFRSFLY*SGDTTD
Trigger: GTCTGTCGTGTCGCCGCTTCAGTAGAGGAAGGATCT...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCAGATCCTTCCTCTACTaGAGCGGCGACACGACAGAC +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLRSFLY*SGDTTD
Trigger: GTCTGTCGTGTCGCCGCTTCAGTAGAGGAAGGATCT...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTCGGACTAGGTGTGGATaGTCCATACTTGCCATGATC +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPRTRCG*SILAMI
Trigger: GATCATGGCAAGTATGGATCATCCACACCTAGTCCG...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATACCATGGGGCATAAGTTaGGTAACCAGCTGGATGGTT +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIPWGIS*VTSWMV
Trigger: AACCATCCAGCTGGTTACTCAACTTATGCCCCATGG...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCGTGCAGATGGGAGGCTaGGGCAAACGTTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFVQMGG*GKRSPF
Trigger: GAAAGGAGAACGTTTGCCTCAGCCTCCCATCTGCAC...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCTGGGAGGTGGGATGTTaGAAGCCTGAGGGACCAAGT +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLWEVGC*KPEGPS
Trigger: ACTTGGTCCCTCAGGCTTTCAACATCCCACCTCCCA...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCTTTATTTACAACTTTTaGCCCAAGGACCTATCCCTA +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSFIYNF*PKDLSL
Trigger: TAGGGATAGGTCCTTGGGTCAAAAGTTGTAAATAAA...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCACTTACTTGCAAAGCTaGCTGTCAAAGAGTATTTTC +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSTYLQS*LSKSIF
Trigger: GAAAATACTCTTTGACAGTCAGCTTTGCAAGTAAGT...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCTCTGGAAATGACATTTaGAAACCAGATTCGTGTCAA +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSSGNDI*KPDSCQ
Trigger: TTGACACGAATCTGGTTTTCAAATGTCATTTCCAGA...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCCTGGTGCTCTCAACATaGGAAGGAGACACACCAGCC +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLLVLST*EGDTPA
Trigger: GGCTGGTGTGTCTCCTTCTCATGTTGAGAGCACCAG...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCCGCAAGGCTCGGTACTaGTGTTCCAGGTCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFRKARY*CSRSER
Trigger: TCTCTCTGACCTGGAACAGCAGTACCGAGCCTTGCG...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAGCCGTCACATTGTTCTaGACACACCGTCCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIAVTLF*THRPCQ
Trigger: TTGACAAGGACGGTGTGTGCAGAACAATGTGACGGC...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTAAGGTCCGTAGCATCTaGCGTCACATTGTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPKVRSI*RHIVLH
Trigger: GTGCAGAACAATGTGACGGCAGATGCTACGGACCTT...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAAAGGTCCGTAGCATCTaGCGTCACATTGTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIKVRSI*RHIVLH
Trigger: GTGCAGAACAATGTGACGGCAGATGCTACGGACCTT...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAGAGGTGATGCCCTGTTaGTTGAGGATAAGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIEVMPC*LRISKD
Trigger: GTCCTTGCTTATCCTCAAGCAACAGGGCATCACCTC...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAAGCAGTAGCACCCTGTaGCACAGGAGCTTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPSSSTL*HRSFWN
Trigger: ATTCCAGAAGCTCCTGTGGCACAGGGTGCTACTGCT...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCACTGGCTTGCGTAGGGTaGCATTACAGCAGGAGTCAT +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPLACVG*HYSRSH
Trigger: ATGACTCCTGCTGTAATGGCACCCTACGCAAGCCAG...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCCTGGCTTGCGTAGGGTaGCATTACAGCAGGAGTCAT +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCLACVG*HYSRSH
Trigger: ATGACTCCTGCTGTAATGGCACCCTACGCAAGCCAG...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAGTATTCAGGATTCTCTaGCACAATAGGCCGGATCCG +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIVFRIL*HNRPDP
Trigger: CGGATCCGGCCTATTGTGGCAGAGAATCCTGAATAC...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCCCTGGCCCGACACAATaGCCACAACAGCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCPGPTQ*PQQLLV
Trigger: AACAAGAAGCTGTTGTGGGCATTGTGTCGGGCCAGG...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCACCTGGCCCGACACAATaGCCACAACAGCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPPGPTQ*PQQLLV
Trigger: AACAAGAAGCTGTTGTGGGCATTGTGTCGGGCCAGG...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAAAGGGAAGAGAGCAGTaGCAGTTGTGTCAATGGGCA +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIKGREQ*QLCQWA
Trigger: TGCCCATTGACACAACTGGCACTGCTCTCTTCCCTT...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCACCACGCAATCCCTGGTaGTCTCAACATGAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPPRNPW*SQHEKE
Trigger: CTCCTTCTCATGTTGAGAGCACCAGGGATTGCGTGG...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCACTGACTGAGAATCGCTaGGCTGGACGGTCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIALTENR*AGRSPP
Trigger: CGGCGGGGACCGTCCAGCCCAGCGATTCTCAGTCAG...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342788.9
ENST00000436443.5
CDS-3UTR CCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCGGCAATGATTTTCTGTaGGTCCCCAGCAACGGCCAG +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFGNDFL*VPSNGQ
Trigger: CTGGCCGTTGCTGGGGACCCACAGAAAATCATTGCC...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACCGACACGACAGACATTaGTCTGGCCCAGGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNRHDRH*SGPGPQ
Trigger: TTGGGGACCTGGGCCAGACCAATGTCTGTCGTGTCG...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAACGACACGACAGACATTaGTCTGGCCCAGGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQRHDRH*SGPGPQ
Trigger: TTGGGGACCTGGGCCAGACCAATGTCTGTCGTGTCG...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCATTTGGATGGCATGGGTaGCACTCCCGATCTGGATCA +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPFGWHG*HSRSGS
Trigger: TGATCCAGATCGGGAGTGCCACCCATGCCATCCAAA...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAGCAGTTTGGATGGCATaGGTGGCACTCCCGATCTGG +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQAVWMA*VALPIW
Trigger: CCAGATCGGGAGTGCCACCCATGCCATCCAAACTGC...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATACATGTTGTGGTAAAGTaGAATGGCCCGTCCATGGGT +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIHVVVK*NGPSMG
Trigger: ACCCATGGACGGGCCATTCCACTTTACCACAACATG...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTCATGTTGTGGTAAAGTaGAATGGCCCGTCCATGGGT +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPHVVVK*NGPSMG
Trigger: ACCCATGGACGGGCCATTCCACTTTACCACAACATG...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCAACCAGCTGGATGGTTaGGCTCAGACACACACCCAG +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFNQLDG*AQTHTQ
Trigger: CTGGGTGTGTGTCTGAGCCCAACCATCCAGCTGGTT...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCATGCCACAGGAGCTTCTaGAATTGTGCTAGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPCHRSF*NCASWG
Trigger: GCCCCAACTAGCACAATTCCAGAAGCTCCTGTGGCA...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAATCCAGCTCTCCTCGTaGGCTCCGTTCTGGGGCAAA +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQIQLSS*APFWGK
Trigger: TTTGCCCCAGAACGGAGCCCACGAGGAGAGCTGGAT...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCTCTACCAAGTGTATGTaGACATATGTGAGTTTCAAG +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSSTKCM*TYVSFK
Trigger: CTTGAAACTCACATATGTCCACATACACTTGGTAGA...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCTTCGTAGTTGATTACTaGAGTAATCCCAAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSFVVDY*SNPKRV
Trigger: AACCCTTTTGGGATTACTCCAGTAATCAACTACGAA...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCCAGCCACGCAATCCCTaGTGCTCTCAACATGAGAAG +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCQPRNP*CSQHEK
Trigger: CTTCTCATGTTGAGAGCACCAGGGATTGCGTGGCTG...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCGTCAAAGTCTGGCAATaGTTTTCTGTGGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCVKVWQ*FSVGPQ
Trigger: CTGGGGACCCACAGAAAATCATTGCCAGACTTTGAC...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAGTCAAAGTCTGGCAATaGTTTTCTGTGGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPVKVWQ*FSVGPQ
Trigger: CTGGGGACCCACAGAAAATCATTGCCAGACTTTGAC...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACTGTGTCCTTAGGTCCTaGGCAGCCTCCAGCACATTC +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNCVLRS*AASSTF
Trigger: GAATGTGCTGGAGGCTGCTCAGGACCTAAGGACACA...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAAAGGTTTGGGGACACTaGGTAACACATGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPKVWGH*VTHAPL
Trigger: CAGTGGAGCATGTGTTACTCAGTGTCCCCAAACCTT...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCAAGGTTTGGGGACACTaGGTAACACATGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCKVWGH*VTHAPL
Trigger: CAGTGGAGCATGTGTTACTCAGTGTCCCCAAACCTT...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTCATGTTTGGTGGCCATaGCTGTATGTTCAGGAAACC +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPHVWWP*LYVQET
Trigger: GGTTTCCTGAACATACAGTCATGGCCACCAAACATG...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAAGATGTTTCCTGCGCTaGTTTCCTTCAGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPRCFLR*FPSGTG
Trigger: TCCAGTCCCTGAAGGAAATCAGCGCAGGAAACATCT...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAAGATCCTTCCTCTACTaGAGCGGCGACACGACAGAC +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQRSFLY*SGDTTD
Trigger: GTCTGTCGTGTCGCCGCTTCAGTAGAGGAAGGATCT...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTTCAGAGCTTCATCCATaGACTCCACATTTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPSELHP*TPHLPW
Trigger: CCAAGGCAAATGTGGAGTTCATGGATGAAGCTCTGA...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACTGGGAGGTGGGATGTTaGAAGCCTGAGGGACCAAGT +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNWEVGC*KPEGPS
Trigger: ACTTGGTCCCTCAGGCTTTCAACATCCCACCTCCCA...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCTGGATAGGAGAGCCCTaGGCTATTAGATTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFWIGEP*AIRLWP
Trigger: GGGCCACAATCTAATAGCTCAGGGCTCTCCTATCCA...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCATCGGGGGACTACTTTaGACCAGGGTGGTAGAAAGG +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFIGGLL*TRVVER
Trigger: CCTTTCTACCACCCTGGTTCAAAGTAGTCCCCCGAT...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTGCCTTTTCAGTAAAGTaGCTCCCTCTCTCACCCAAA +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPAFSVK*LPLSPK
Trigger: TTTGGGTGAGAGAGGGAGTCACTTTACTGAAAAGGC...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTAGCGAGTGCAGAGGTTaGACACATCACAATAGTGCT +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPSECRG*THHNSA
Trigger: AGCACTATTGTGATGTGTTCAACCTCTGCACTCGCT...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCGAGAGGTCCCGGTTGTaGTCAATGCTGGTTATCTCC +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFERSRL*SMLVIS
Trigger: GGAGATAACCAGCATTGAGCACAACCGGGACCTCTC...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCGAGAGGTCCCGGTTGTaGTCAATGCTGGTTATCTCC +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLERSRL*SMLVIS
Trigger: GGAGATAACCAGCATTGAGCACAACCGGGACCTCTC...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAGAGGTGATGCCCTGTTaGTTGAGGATAAGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPEVMPC*LRISKD
Trigger: GTCCTTGCTTATCCTCAAGCAACAGGGCATCACCTC...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATATGGAACACAGATGGTTaGACACCATTCCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIWNTDG*TPFLQQ
Trigger: CTGCTGAAGGAATGGTGTGCAACCATCTGTGTTCCA...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATACATGAACTCCACATTTaGCTTGGGACCAGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIHELHI*LGTSCL
Trigger: GAGACAACTGGTCCCAAGGCAAATGTGGAGTTCATG...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATCTGGGTGCTGAAGGGTaGTCCGAGGTGGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYLGAEG*SEVAGC
Trigger: ACAGCCTGCCACCTCGGAGCACCCTTCAGCACCCAG...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAGTATTCAGGATTCTCTaGCACAATAGGCCGGATCCG +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPVFRIL*HNRPDP
Trigger: CGGATCCGGCCTATTGTGGCAGAGAATCCTGAATAC...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACGGTGAGGCAGGGGCCTaGAAAAGTGACAGATCCTAC +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNGEAGA*KSDRSY
Trigger: GTAGGATCTGTCACTTTTGCAGGCCCCTGCCTCACC...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAAAGGGAAGAGAGCAGTaGCAGTTGTGTCAATGGGCA +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPKGREQ*QLCQWA
Trigger: TGCCCATTGACACAACTGGCACTGCTCTCTTCCCTT...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTAAAGGGTTCTTGGAGTaGTATGGTTGTAGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPKGFLE*YGCSPL
Trigger: GAGGGGACTACAACCATAGCACTCCAAGAACCCTTT...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCGCATTCAAAGTTAGCTaGCCTCACACAGCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFAFKVS*PHTAAP
Trigger: CGGAGCAGCTGTGTGAGGGCAGCTAACTTTGAATGC...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATATACACCATGGGAAAATaGGGTTTCAGCATGCAGCCA +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIYTMGK*GFSMQP
Trigger: TGGCTGCATGCTGAAACCGCATTTTCCCATGGTGTA...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCTTCGCATTCTATAATTaGCTTGTACAGGTACAATTC +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSFAFYN*LVQVQF
Trigger: GAATTGTACCTGTACAAGGCAATTATAGAATGCGAA...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAGGTTGTGCTCAATGCTaGTTATCTCCAGGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPGCAQC*LSPGCP
Trigger: TGGGCAACCTGGAGATAACCAGCATTGAGCACAACC...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAGGCAATGATTTTCTGTaGGTCCCCAGCAACGGCCAG +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQGNDFL*VPSNGQ
Trigger: CTGGCCGTTGCTGGGGACCCACAGAAAATCATTGCC...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCACCCAACAGCCATCACTaGAACACAGATGGTTGCACA +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPPNSHH*NTDGCT
Trigger: TGTGCAACCATCTGTGTTCCAGTGATGGCTGTTGGG...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCCACACTCCACACAGATaGAGCCATTCTCAAACTCCC +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCHTPHR*SHSQTP
Trigger: GGGAGTTTGAGAATGGCTCCATCTGTGTGGAGTGTG...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCTCCATCTTCTCACACTaGGGGTCACACTCCACACAG +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLSIFSH*GSHSTQ
Trigger: CTGTGTGGAGTGTGACCCCCAGTGTGAGAAGATGGA...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCTCCATCTTCTCACACTaGGGGTCACACTCCACACAG +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFSIFSH*GSHSTQ
Trigger: CTGTGTGGAGTGTGACCCCCAGTGTGAGAAGATGGA...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCTTTGGATGGCATGGGTaGCACTCCCGATCTGGATCA +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLFGWHG*HSRSGS
Trigger: TGATCCAGATCGGGAGTGCCACCCATGCCATCCAAA...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATACCTTGGGTGGACCATTaGATGCATTGTGATATTCGG +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIPWVDH*MHCDIR
Trigger: CCGAATATCACAATGCATCCAATGGTCCACCCAAGG...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTAATGGATTCCCTCATTaGGCCACCCCTGAAAGTATC +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPNGFPH*ATPESI
Trigger: GATACTTTCAGGGGTGGCCCAATGAGGGAATCCATT...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCCTAATTTGCTTGGTTTaGCATTTCCACAGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSLICLV*HFHSLY
Trigger: ATAAAGACTGTGGAAATGCCAAACCAAGCAAATTAG...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATATCTCATCATAGTCCCTaGATACCGTTGCAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSISHHSP*IPLQGS
Trigger: GGAACCTTGCAACGGTATCCAGGGACTATGATGAGA...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCCTTATAGCATTATCGTaGTTCTGTCCAGTTATATAC +
Preference number: 4 (lower is better)
Translates to: MSPGQELGEAGACKSDRSLIALS*FCPVIY
Trigger: GTATATAACTGGACAGAACCACGATAATGCTATAAG...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCAAGGTTTGGGGACACTaGGTAACACATGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFKVWGH*VTHAPL
Trigger: CAGTGGAGCATGTGTTACTCAGTGTCCCCAAACCTT...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCCATGTTTGGTGGCCATaGCTGTATGTTCAGGAAACC +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCHVWWP*LYVQET
Trigger: GGTTTCCTGAACATACAGTCATGGCCACCAAACATG...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCAGATGTTTCCTGCGCTaGTTTCCTTCAGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFRCFLR*FPSGTG
Trigger: TCCAGTCCCTGAAGGAAATCAGCGCAGGAAACATCT...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTTCTCAGATCCCGTGCTaGCAATTACATGTCCAAATG +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPSQIPC*QLHVQM
Trigger: CATTTGGACATGTAATTGTCAGCACGGGATCTGAGA...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342788.9
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCTCAGAGCTTCATCCATaGACTCCACATTTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCSELHP*TPHLPW
Trigger: CCAAGGCAAATGTGGAGTTCATGGATGAAGCTCTGA...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCCCATGGGGCATAAGTTaGGTAACCAGCTGGATGGTT +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLPWGIS*VTSWMV
Trigger: AACCATCCAGCTGGTTACTCAACTTATGCCCCATGG...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCCCATGGGGCATAAGTTaGGTAACCAGCTGGATGGTT +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFPWGIS*VTSWMV
Trigger: AACCATCCAGCTGGTTACTCAACTTATGCCCCATGG...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACGCTGCCAAATCCCGATaGACGAGTCGTCTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNAAKSR*TSRLSS
Trigger: GGAAGAAAGACGACTCGTTCATCGGGATTTGGCAGC...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAGTCTCGAGCCATCCTTaGAAACTCAGCAGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQVSSHP*KLSSQF
Trigger: GAACTGGCTGCTGAGTTTTCAAGGATGGCTCGAGAC...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTATAACTAGGTATCTTTaGGGGTCTCGAGCCATCCTT +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPITRYL*GSRAIL
Trigger: AAGGATGGCTCGAGACCCTCAAAGATACCTAGTTAT...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCATGTTGGCAAAGGTGTTaGGGTACAGTGGCTCATTCA +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPCWQRC*GTVAHS
Trigger: TGAATGAGCCACTGTACCTCAACACCTTTGCCAACA...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTTTAGATTGTGGCCCCTaGATCACTCTGTGTCTTTAC +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPLDCGP*ITLCLY
Trigger: GTAAAGACACAGAGTGATTCAGGGGCCACAATCTAA...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACATCGGGGGACTACTTTaGACCAGGGTGGTAGAAAGG +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNIGGLL*TRVVER
Trigger: CCTTTCTACCACCCTGGTTCAAAGTAGTCCCCCGAT...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCGCCTTTTCAGTAAAGTaGCTCCCTCTCTCACCCAAA +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCAFSVK*LPLSPK
Trigger: TTTGGGTGAGAGAGGGAGTCACTTTACTGAAAAGGC...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAAGCGAGTGCAGAGGTTaGACACATCACAATAGTGCT +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPSECRG*THHNSA
Trigger: AGCACTATTGTGATGTGTTCAACCTCTGCACTCGCT...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCAGCGAGTGCAGAGGTTaGACACATCACAATAGTGCT +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCSECRG*THHNSA
Trigger: AGCACTATTGTGATGTGTTCAACCTCTGCACTCGCT...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATACCAAAAGAGGATCCTTaGGAACTAACGGAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIPKEDP*ELTEKP
Trigger: AGGCTTTTCCGTTAGTTCTCAAGGATCCTCTTTTGG...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAAGTTTTCATAGTACTTaGGCAAGGCTCGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSISFHST*ARLGTA
Trigger: AGCAGTACCGAGCCTTGCGCAAGTACTATGAAAACT...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAGAGAGGTCCCGGTTGTaGTCAATGCTGGTTATCTCC +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQERSRL*SMLVIS
Trigger: GGAGATAACCAGCATTGAGCACAACCGGGACCTCTC...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAACGTTACACCCTTGGGTaGAGTTTGGATGGCATGGGT +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQRYTLG*SLDGMG
Trigger: ACCCATGCCATCCAAACTGCACCCAAGGGTGTAACG...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTCCAATGTTATCCTTGTaGTCGTGGACATACTCCAAC +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPPMLSL*SWTYSN
Trigger: GTTGGAGTATGTCCACGAGCACAAGGATAACATTGG...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCCACTGTACCTCTGGGTaGTACTGTCCTCTTGGACAT +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLHCTSG*YCPLGH
Trigger: ATGTCCAAGAGGACAGTAGCACCCAGAGGTACAGTG...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCGTATTCAGGATTCTCTaGCACAATAGGCCGGATCCG +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLVFRIL*HNRPDP
Trigger: CGGATCCGGCCTATTGTGGCAGAGAATCCTGAATAC...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAAGCTCTAGGATCCTCTaGCCACAGTATACAGTAGAA +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSISSRIL*PQYTVE
Trigger: TTCTACTGTATACTGTGGGCAGAGGATCCTAGAGCT...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACGCATTCAAAGTTAGCTaGCCTCACACAGCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNAFKVS*PHTAAP
Trigger: CGGAGCAGCTGTGTGAGGGCAGCTAACTTTGAATGC...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACCCACGCAATCCCTGGTaGTCTCAACATGAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNPRNPW*SQHEKE
Trigger: CTCCTTCTCATGTTGAGAGCACCAGGGATTGCGTGG...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAAATGCGGTTTCAGCATaGAGCCACGCAATCCCTGGT +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQNAVSA*SHAIPG
Trigger: ACCAGGGATTGCGTGGCTGCATGCTGAAACCGCATT...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCGGTTGTGCTCAATGCTaGTTATCTCCAGGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLGCAQC*LSPGCP
Trigger: TGGGCAACCTGGAGATAACCAGCATTGAGCACAACC...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCCCAGTACAGGACTTATaGCAACGTCCACATCCTGAA +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCPVQDL*QRPHPE
Trigger: TTCAGGATGTGGACGTTGCCATAAGTCCTGTACTGG...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAGCCATCACAAGCTTTTaGGCAAATGTCAGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPAITSF*ANVSAR
Trigger: CCTTGCACTGACATTTGCCCAAAAGCTTGTGATGGC...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTGACGTTCAGTTTCTCTaGGTCTATGGCTTCAATTGC +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPDVQFL*VYGFNC
Trigger: GCAATTGAAGCCATAGACCCAGAGAAACTGAACGTC...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTATTTCCTTCAGGGACTaGAACTGTAGAGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPISFRD*NCREVM
Trigger: CATCACCTCTCTACAGTTCCAGTCCCTGAAGGAAAT...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTTCACTGGAACACAGATaGTTGCACACCATTCCTTCA +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPSLEHR*LHTIPS
Trigger: TGAAGGAATGGTGTGCAACCATCTGTGTTCCAGTGA...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCCACACTCCACACAGATaGAGCCATTCTCAAACTCCC +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLHTPHR*SHSQTP
Trigger: GGGAGTTTGAGAATGGCTCCATCTGTGTGGAGTGTG...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTGTGGCACTCCCGATCTaGATCAGCATACTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPVALPI*ISILEN
Trigger: ATTTTCAAGTATGCTGATCCAGATCGGGAGTGCCAC...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCGGAATGGCCCGTCCATaGGTAGTAAATGCAGTCATG +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFGMARP*VVNAVM
Trigger: CATGACTGCATTTACTACCCATGGACGGGCCATTCC...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAAGTATAGATGGGAGGTaGGATGTTGAAAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPSIDGR*DVESLR
Trigger: CCTCAGGCTTTCAACATCCCACCTCCCATCTATACT...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACTCAGCACTGTACCTCTaGGTGCTACTGTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNSALYL*VLLSSW
Trigger: CCAAGAGGACAGTAGCACCCAGAGGTACAGTGCTGA...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAACTCATCCTCGGCCTTaGGTGGACCATTGGATGCAT +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQTHPRP*VDHWMH
Trigger: ATGCATCCAATGGTCCACCCAAGGCCGAGGATGAGT...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATATGTCAAACGCTTTCTTaGCCTTCTCTGGCATTGACA +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSICQTLS*PSLALT
Trigger: TGTCAATGCCAGAGAAGGCCAAGAAAGCGTTTGACA...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACCAGCCACGCAATCCCTaGTGCTCTCAACATGAGAAG +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNQPRNP*CSQHEK
Trigger: CTTCTCATGTTGAGAGCACCAGGGATTGCGTGGCTG...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAAGATGTTTCCTGCGCTaGTTTCCTTCAGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQRCFLR*FPSGTG
Trigger: TCCAGTCCCTGAAGGAAATCAGCGCAGGAAACATCT...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCACCGGTCCATGGCATGTaGGGAGGCCATCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAPVHGM*GGHLPS
Trigger: AGATGGAAGATGGCCTCCTCACATGCCATGGACCGG...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATCCGGTCCATGGCATGTaGGGAGGCCATCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYPVHGM*GGHLPS
Trigger: AGATGGAAGATGGCCTCCTCACATGCCATGGACCGG...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAGTTAAGCAGCAGTTGTaGTCCAATGTTATCCTTGTG +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIVKQQL*SNVILV
Trigger: CACAAGGATAACATTGGATCACAACTGCTGCTTAAC...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTCTAGCCCAAAATCTGTaGTTTTCACATGGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPLAQNL*FSHGLE
Trigger: CTCCAAACCATGTGAAAATCACAGATTTTGGGCTAG...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTCGTCACTCTGATGGGTaGATTTCCTGTAATGTATAC +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPRHSDG*ISCNVY
Trigger: GTATACATTACAGGAAATTCACCCATCAGAGTGACG...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCATAACTAGGTATCTTTaGGGGTCTCGAGCCATCCTT +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCITRYL*GSRAIL
Trigger: AAGGATGGCTCGAGACCCTCAAAGATACCTAGTTAT...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAACCCATGCAGAGAAATaGAGAAACATTGTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSITHAEK*RNIVVP
Trigger: AGGAACCACAATGTTTCTTCATTTCTCTGCATGGGT...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCATTAGATTGTGGCCCCTaGATCACTCTGTGTCTTTAC +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPLDCGP*ITLCLY
Trigger: GTAAAGACACAGAGTGATTCAGGGGCCACAATCTAA...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCTTAGATTGTGGCCCCTaGATCACTCTGTGTCTTTAC +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCLDCGP*ITLCLY
Trigger: GTAAAGACACAGAGTGATTCAGGGGCCACAATCTAA...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATACCTCTACAAAATCAGTaGGACTTGAACCGAGTATCT +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIPLQNQ*DLNRVS
Trigger: AGATACTCGGTTCAAGTCTCACTGATTTTGTAGAGG...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTATTCGAGGGCAAAGATaGAGTCAGTGTTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPIRGQR*SQCFTK
Trigger: CTTTGTGAAACACTGACTTCATCTTTGCCCTCGAAT...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTTGCTCAAGAAAGAGATaGACTAGTCATACACCATGG +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPCSRKR*TSHTPW
Trigger: CCATGGTGTATGACTAGTTCATCTCTTTCTTGAGCA...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCACCAAAAGAGGATCCTTaGGAACTAACGGAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPPKEDP*ELTEKP
Trigger: AGGCTTTTCCGTTAGTTCTCAAGGATCCTCTTTTGG...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAATTGTTCAGCTGGGATaGTCAGTATGGAATGAGGCA +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPIVQLG*SVWNEA
Trigger: TGCCTCATTCCATACTGATCATCCCAGCTGAACAAT...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCAGTTTTCATAGTACTTaGGCAAGGCTCGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCSFHST*ARLGTA
Trigger: AGCAGTACCGAGCCTTGCGCAAGTACTATGAAAACT...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCGTCTATGGCTTCAATTaGATTGTAAGGGTCCCCATG +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCVYGFN*IVRVPM
Trigger: CATGGGGACCCTTACAATGCAATTGAAGCCATAGAC...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAGTCTATGGCTTCAATTaGATTGTAAGGGTCCCCATG +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPVYGFN*IVRVPM
Trigger: CATGGGGACCCTTACAATGCAATTGAAGCCATAGAC...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACGAGGTGATGCCCTGTTaGTTGAGGATAAGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNEVMPC*LRISKD
Trigger: GTCCTTGCTTATCCTCAAGCAACAGGGCATCACCTC...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCCTTGATTGGGTGCTGTaGCACTGGGAGTTAATGGTT +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFLDWVL*HWELMV
Trigger: AACCATTAACTCCCAGTGGCACAGCACCCAATCAAG...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCCTTGATTGGGTGCTGTaGCACTGGGAGTTAATGGTT +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLLDWVL*HWELMV
Trigger: AACCATTAACTCCCAGTGGCACAGCACCCAATCAAG...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCCCAATGTTATCCTTGTaGTCGTGGACATACTCCAAC +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCPMLSL*SWTYSN
Trigger: GTTGGAGTATGTCCACGAGCACAAGGATAACATTGG...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAACACTGTACCTCTGGGTaGTACTGTCCTCTTGGACAT +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQHCTSG*YCPLGH
Trigger: ATGTCCAAGAGGACAGTAGCACCCAGAGGTACAGTG...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATACTCCTGACCAACCCATaGAGAGAAATGAAGAAACAT +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSILLTNP*REMKKH
Trigger: ATGTTTCTTCATTTCTCTGCATGGGTTGGTCAGGAG...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTGCAAGGTTCCTAATTTaGTTGGTTTGGCATTTCCAC +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPARFLI*LVWHFH
Trigger: GTGGAAATGCCAAACCAAGCAAATTAGGAACCTTGC...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTCTTCTTGTTTCCAACTaGAGAGAGAACTCAGATCTC +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPLLVSN*RENSDL
Trigger: GAGATCTGAGTTCTCTCTGCAGTTGGAAACAAGAAG...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAAAGGGAAGAGAGCAGTaGCAGTTGTGTCAATGGGCA +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQKGREQ*QLCQWA
Trigger: TGCCCATTGACACAACTGGCACTGCTCTCTTCCCTT...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCACACAAGAGTCAAGTTaGAAGGCCATGGGTTCCGAA +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFTQESS*KAMGSE
Trigger: TTCGGAACCCATGGCCTTCCAACTTGACTCTTGTGT...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCACACAAGAGTCAAGTTaGAAGGCCATGGGTTCCGAA +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLTQESS*KAMGSE
Trigger: TTCGGAACCCATGGCCTTCCAACTTGACTCTTGTGT...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCCCAGTACAGGACTTATaGCAACGTCCACATCCTGAA +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLPVQDL*QRPHPE
Trigger: TTCAGGATGTGGACGTTGCCATAAGTCCTGTACTGG...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAATTTCCTTCAGGGACTaGAACTGTAGAGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPISFRD*NCREVM
Trigger: CATCACCTCTCTACAGTTCCAGTCCCTGAAGGAAAT...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCTCACTGGAACACAGATaGTTGCACACCATTCCTTCA +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCSLEHR*LHTIPS
Trigger: TGAAGGAATGGTGTGCAACCATCTGTGTTCCAGTGA...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCATCACTGGAACACAGATaGTTGCACACCATTCCTTCA +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPSLEHR*LHTIPS
Trigger: TGAAGGAATGGTGTGCAACCATCTGTGTTCCAGTGA...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAACCCAACAGCCATCACTaGAACACAGATGGTTGCACA +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQPNSHH*NTDGCT
Trigger: TGTGCAACCATCTGTGTTCCAGTGATGGCTGTTGGG...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCAATTACATGTCCAAATaGCATATCCCCCTTTCGGGC +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCNYMSK*HIPLSG
Trigger: GCCCGAAAGGGGGATATGCCATTTGGACATGTAATT...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342788.9
ENST00000436443.5
CDS-3UTR CCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCTTATCCTTGTGCTCGTaGACATACTCCAACAGGCAG +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFLSLCS*TYSNRQ
Trigger: CTGCCTGTTGGAGTATGTCCACGAGCACAAGGATAA...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCTTATCCTTGTGCTCGTaGACATACTCCAACAGGCAG +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLLSLCS*TYSNRQ
Trigger: CTGCCTGTTGGAGTATGTCCACGAGCACAAGGATAA...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAAGCCATCCATTTAATTaGCATCTTTCCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSISHPFN*HLSSIS
Trigger: GCTGATGGAGGAAAGATGCCAATTAAATGGATGGCT...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTAGTCAATTCTTGCTCTaGAAGTATAGATGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPSQFLL*KYRWEV
Trigger: CACCTCCCATCTATACTTCCAGAGCAAGAATTGACT...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAATGGAATTGTGCTAGTTaGGGCTCTGTAGGGCACAGA +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQWNCAS*GSVGHR
Trigger: TCTGTGCCCTACAGAGCCCCAACTAGCACAATTCCA...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAGTGCTACTGTCCTCTTaGACATGGGGTGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAVLLSS*TWGATG
Trigger: GCCAGTGGCACCCCATGTCCAAGAGGACAGTAGCAC...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATATCCAGCTCTCCTCGTaGGCTCCGTTCTGGGGCAAA +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYIQLSS*APFWGK
Trigger: TTTGCCCCAGAACGGAGCCCACGAGGAGAGCTGGAT...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTAGGGTTCTCCTCCACTaGATTCAGGTATTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPRVLLH*IQVFLF
Trigger: AAACAAGAATACCTGAATCCAGTGGAGGAGAACCCT...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCATGTCAAACGCTTTCTTaGCCTTCTCTGGCATTGACA +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPCQTLS*PSLALT
Trigger: TGTCAATGCCAGAGAAGGCCAAGAAAGCGTTTGACA...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAACAAAACTACTGGCCTTaGGGTAGAAGGAAGACCACC +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQQNYWP*GRRKTT
Trigger: GGTGGTCTTCCTTCTACCCCAAGGCCAGTAGTTTTG...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAATGAAGATAATGTGCTaGCCTCTCATCATAGTCCCT +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIMKIMC*PLIIVP
Trigger: AGGGACTATGATGAGAGGCCAGCACATTATCTTCAT...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCTGTCTCCAATATTCTTaGCCAAGGACCACCATCTGC +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLCLQYS*PRTTIC
Trigger: GCAGATGGTGGTCCTTGGCCAAGAATATTGGAGACA...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAAAACACAAGGGCCCCTaGCCCGACACAATGCCCACA +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAKHKGP*PDTMPT
Trigger: TGTGGGCATTGTGTCGGGCCAGGGGCCCTTGTGTTT...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATAAACACAAGGGCCCCTaGCCCGACACAATGCCCACA +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYKHKGP*PDTMPT
Trigger: TGTGGGCATTGTGTCGGGCCAGGGGCCCTTGTGTTT...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTCTCAGAGATCCACTATaGCTTAAGAAAGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPLRDPL*LKKGTG
Trigger: TCCTGTTCCTTTCTTAAGCCATAGTGGATCTCTGAG...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCATCCCAAAAGGGTTCTTaGAGTGCTATGGTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPSQKGS*SAMVVV
Trigger: GACTACAACCATAGCACTCCAAGAACCCTTTTGGGA...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAACTAGTCATACACCATaGGAAAATGCGGTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSITSHTP*ENAVSA
Trigger: TGCTGAAACCGCATTTTCCCATGGTGTATGACTAGT...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAGATGGCAGCAGTCACTaGCGTAAGGTCCGTAGCATC +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIADGSSH*RKVRSI
Trigger: GATGCTACGGACCTTACGTCAGTGACTGCTGCCATC...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCATGCTCCACTGTCATTaGAATTCATGCAGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFMLHCH*NSCRQS
Trigger: GCTTTGCCTGCATGAATTTCAATGACAGTGGAGCAT...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCATGCTCCACTGTCATTaGAATTCATGCAGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLMLHCH*NSCRQS
Trigger: GCTTTGCCTGCATGAATTTCAATGACAGTGGAGCAT...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCACCCCATGAATACCAGTaGCTAGAAAGATCAAATTCC +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPPHEYQ*LERSNS
Trigger: GGAATTTGATCTTTCTAGTCACTGGTATTCATGGGG...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAGTTAAGCAGCAGTTGTaGTCCAATGTTATCCTTGTG +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPVKQQL*SNVILV
Trigger: CACAAGGATAACATTGGATCACAACTGCTGCTTAAC...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCACTAGCCCAAAATCTGTaGTTTTCACATGGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPLAQNL*FSHGLE
Trigger: CTCCAAACCATGTGAAAATCACAGATTTTGGGCTAG...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATGTGCAGATGGGAGGCTaGGGCAAACGTTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYVQMGG*GKRSPF
Trigger: GAAAGGAGAACGTTTGCCTCAGCCTCCCATCTGCAC...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCATAACTAGGTATCTTTaGGGGTCTCGAGCCATCCTT +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLITRYL*GSRAIL
Trigger: AAGGATGGCTCGAGACCCTCAAAGATACCTAGTTAT...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTAAGTTTCCTAATTATTaGTGTGAGGCCCCCTTTACT +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPKFPNY*CEAPFT
Trigger: AGTAAAGGGGGCCTCACATCAATAATTAGGAAACTT...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAAAGTTTCCTAATTATTaGTGTGAGGCCCCCTTTACT +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIKFPNY*CEAPFT
Trigger: AGTAAAGGGGGCCTCACATCAATAATTAGGAAACTT...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTAGAGACTATGCAATCTaGTTGTTGGAACGCATAGAA +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPRDYAI*LLERIE
Trigger: TTCTATGCGTTCCAACAATCAGATTGCATAGTCTCT...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATATTAACAACTAGAAGCTaGTGTTGTAGGATCAGCTCT +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSILTTRS*CCRISS
Trigger: AGAGCTGATCCTACAACATCAGCTTCTAGTTGTTAA...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCACCTCTACAAAATCAGTaGGACTTGAACCGAGTATCT +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPPLQNQ*DLNRVS
Trigger: AGATACTCGGTTCAAGTCTCACTGATTTTGTAGAGG...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAATTCGAGGGCAAAGATaGAGTCAGTGTTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPIRGQR*SQCFTK
Trigger: CTTTGTGAAACACTGACTTCATCTTTGCCCTCGAAT...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTGGTGGTTATCAAAGCTaGATAGCCTTTACCTTTATG +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPGGYQS*IAFTFM
Trigger: CATAAAGGTAAAGGCTATTCAGCTTTGATAACCACC...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCATGATCAGTATGGAATaGGGCAAAGCAGTTCGCATT +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCMISME*GKAVRI
Trigger: AATGCGAACTGCTTTGCCTCATTCCATACTGATCAT...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCATTGTTCAGCTGGGATaGTCAGTATGGAATGAGGCA +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFIVQLG*SVWNEA
Trigger: TGCCTCATTCCATACTGATCATCCCAGCTGAACAAT...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCATTGTTCAGCTGGGATaGTCAGTATGGAATGAGGCA +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLIVQLG*SVWNEA
Trigger: TGCCTCATTCCATACTGATCATCCCAGCTGAACAAT...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCTGGATGATCCATACTTaGCATGATCAGAGCTTCATC +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCWMIHT*HDQSFI
Trigger: GATGAAGCTCTGATCATGGCAAGTATGGATCATCCA...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTCATATGAAGATAATGTaGTGGCCTCTCATCATAGTC +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPHMKIM*WPLIIV
Trigger: GACTATGATGAGAGGCCAGCACATTATCTTCATATG...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCCCAAGGACCACCATCTaGTTTTGGTTTAATGGTGAA +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCPRTTI*FWFNGE
Trigger: TTCACCATTAAACCAAAAGCAGATGGTGGTCCTTGG...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCACCAAGGACCACCATCTaGTTTTGGTTTAATGGTGAA +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPPRTTI*FWFNGE
Trigger: TTCACCATTAAACCAAAAGCAGATGGTGGTCCTTGG...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCAGCTCTAGGATCCTCTaGCCACAGTATACAGTAGAA +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFSSRIL*PQYTVE
Trigger: TTCTACTGTATACTGTGGGCAGAGGATCCTAGAGCT...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCACTTCTTGTTTCCAACTaGAGAGAGAACTCAGATCTC +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPLLVSN*RENSDL
Trigger: GAGATCTGAGTTCTCTCTGCAGTTGGAAACAAGAAG...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAGGTGAGGCAGGGGCCTaGAAAAGTGACAGATCCTAC +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAGEAGA*KSDRSY
Trigger: GTAGGATCTGTCACTTTTGCAGGCCCCTGCCTCACC...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACTACACCATGGGAAAATaGGGTTTCAGCATGCAGCCA +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNYTMGK*GFSMQP
Trigger: TGGCTGCATGCTGAAACCGCATTTTCCCATGGTGTA...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTTACACCTTAAGCCTCTaGCTTTTCAGTAAAGTGACT +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPYTLSL*LFSKVT
Trigger: AGTCACTTTACTGAAAAGGCAGAGGCTTAAGGTGTA...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACACACAAGAGTCAAGTTaGAAGGCCATGGGTTCCGAA +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNTQESS*KAMGSE
Trigger: TTCGGAACCCATGGCCTTCCAACTTGACTCTTGTGT...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATGGCAATGATTTTCTGTaGGTCCCCAGCAACGGCCAG +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYGNDFL*VPSNGQ
Trigger: CTGGCCGTTGCTGGGGACCCACAGAAAATCATTGCC...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCGCTCCAGTTGAAAGGTaGTTGGATTGTAGACAAAGG +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFAPVER*LDCRQR
Trigger: CCTTTGTCTACAATCCAACCACCTTTCAACTGGAGC...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTCACGCACACAAGAACTaGAATCTACCACAAAGTTAT +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPHAHKN*NLPQSY
Trigger: ATAACTTTGTGGTAGATTCCAGTTCTTGTGTGCGTG...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAGCCATCACAAGCTTTTaGGCAAATGTCAGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQAITSF*ANVSAR
Trigger: CCTTGCACTGACATTTGCCCAAAAGCTTGTGATGGC...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACGCCATCACAAGCTTTTaGGCAAATGTCAGTGCAAGG +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNAITSF*ANVSAR
Trigger: CCTTGCACTGACATTTGCCCAAAAGCTTGTGATGGC...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAATTTGTCAATGTTACTaGAATCCACAGTCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIICQCY*NPQSEL
Trigger: CAGCTCAGACTGTGGATTCCAGTAACATTGACAAAT...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTATTTGTCAATGTTACTaGAATCCACAGTCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPICQCY*NPQSEL
Trigger: CAGCTCAGACTGTGGATTCCAGTAACATTGACAAAT...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAGTTTCTCTGGGTCTATaGCTTCAATTGCATTGTAAG +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIVSLGL*LQLHCK
Trigger: CTTACAATGCAATTGAAGCCATAGACCCAGAGAAAC...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCGACGTTCAGTTTCTCTaGGTCTATGGCTTCAATTGC +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLDVQFL*VYGFNC
Trigger: GCAATTGAAGCCATAGACCCAGAGAAACTGAACGTC...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAAACCAGCTGGATGGTTaGGCTCAGACACACACCCAG +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIANQLDG*AQTHTQ
Trigger: CTGGGTGTGTGTCTGAGCCCAACCATCCAGCTGGTT...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACTTATCCTTGTGCTCGTaGACATACTCCAACAGGCAG +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNLSLCS*TYSNRQ
Trigger: CTGCCTGTTGGAGTATGTCCACGAGCACAAGGATAA...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCAGGGATTTCTCGCGTTaGAATTCCATCATAGGGTTT +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCRDFSR*NSIIGF
Trigger: AAACCCTATGATGGAATTCCAACGCGAGAAATCCCT...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAAGTATAGATGGGAGGTaGGATGTTGAAAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQSIDGR*DVESLR
Trigger: CCTCAGGCTTTCAACATCCCACCTCCCATCTATACT...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCAGTCAATTCTTGCTCTaGAAGTATAGATGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCSQFLL*KYRWEV
Trigger: CACCTCCCATCTATACTTCCAGAGCAAGAATTGACT...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACCCTTGGGTGGACCATTaGATGCATTGTGATATTCGG +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNPWVDH*MHCDIR
Trigger: CCGAATATCACAATGCATCCAATGGTCCACCCAAGG...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCCTCTGTATCTTCCACTaGGAAGTGTCAAAACTACTG +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCLCIFH*EVSKLL
Trigger: CAGTAGTTTTGACACTTCCCAGTGGAAGATACAGAG...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAAATGGATTCCCTCATTaGGCCACCCCTGAAAGTATC +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQNGFPH*ATPESI
Trigger: GATACTTTCAGGGGTGGCCCAATGAGGGAATCCATT...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCTTTCTTCCAGTTCAATaGATTCCCTCATTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLFLPVQ*IPSLGH
Trigger: GTGGCCCAATGAGGGAATCCATTGAACTGGAAGAAA...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACTCTCATCATAGTCCCTaGATACCGTTGCAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNSHHSP*IPLQGS
Trigger: GGAACCTTGCAACGGTATCCAGGGACTATGATGAGA...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCCAGTGTTTCACAAAGTaGGGTGTAGGATCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFQCFTK*GVGSQR
Trigger: TCTCTGAGATCCTACACCCCACTTTGTGAAACACTG...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCACTAACACGTAGCCTGTaGCTTCTCGAACAGACCGCA +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIALTRSL*LLEQTA
Trigger: TGCGGTCTGTTCGAGAAGTCACAGGCTACGTGTTAG...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATCTAACACGTAGCCTGTaGCTTCTCGAACAGACCGCA +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYLTRSL*LLEQTA
Trigger: TGCGGTCTGTTCGAGAAGTCACAGGCTACGTGTTAG...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCCCCCATGAATACCAGTaGCTAGAAAGATCAAATTCC +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLPHEYQ*LERSNS
Trigger: GGAATTTGATCTTTCTAGTCACTGGTATTCATGGGG...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACAACCTGTTATCTCTCTaGCTGTCCGAAAGACGTTCA +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNNLLSL*LSERRS
Trigger: TGAACGTCTTTCGGACAGTCAGAGAGATAACAGGTT...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAAACCTGTTATCTCTCTaGCTGTCCGAAAGACGTTCA +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQNLLSL*LSERRS
Trigger: TGAACGTCTTTCGGACAGTCAGAGAGATAACAGGTT...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCGTTAAGCAGCAGTTGTaGTCCAATGTTATCCTTGTG +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLVKQQL*SNVILV
Trigger: CACAAGGATAACATTGGATCACAACTGCTGCTTAAC...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATGCTGCCAAATCCCGATaGACGAGTCGTCTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYAAKSR*TSRLSS
Trigger: GGAAGAAAGACGACTCGTTCATCGGGATTTGGCAGC...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCCGTCACTCTGATGGGTaGATTTCCTGTAATGTATAC +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLRHSDG*ISCNVY
Trigger: GTATACATTACAGGAAATTCACCCATCAGAGTGACG...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAGTCTCGAGCCATCCTTaGAAACTCAGCAGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAVSSHP*KLSSQF
Trigger: GAACTGGCTGCTGAGTTTTCAAGGATGGCTCGAGAC...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATATCATCCAAGAGATTCTaGAAGAACTTGCTGTCATTT +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSISSKRF*KNLLSF
Trigger: AAATGACAGCAAGTTCTTTCAGAATCTCTTGGATGA...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCATACAAACTGGTTTCCTaGCATGGGGGTGTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAYKLVS*HGGVGR
Trigger: CCTGCCTACACCCCCATGTCAGGAAACCAGTTTGTA...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342788.9
CDS-3UTR TCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTGATATTCCATTTATCTaGGTGTTCCCCACAAAACAT +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPDIPFI*VFPTKH
Trigger: ATGTTTTGTGGGGAACACTCAGATAAATGGAATATC...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCAGAGACTATGCAATCTaGTTGTTGGAACGCATAGAA +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCRDYAI*LLERIE
Trigger: TTCTATGCGTTCCAACAATCAGATTGCATAGTCTCT...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAACCCTCTTATACATGCTaGAATATGTTTTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQPSYTC*NMFSQG
Trigger: CCCCTGGGAAAACATATTTCAGCATGTATAAGAGGG...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTTTAACAACTAGAAGCTaGTGCACATGGATTTCTCAT +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPLTTRS*CTWISH
Trigger: ATGAGAAATCCATGTGCATCAGCTTCTAGTTGTTAA...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCAAGGACACAGAGAATTaGTCTTCATGGGAAACCATA +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCKDTEN*SSWETI
Trigger: TATGGTTTCCCATGAAGATCAATTCTCTGTGTCCTT...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATATATAACCACTTCTCATaGTATAGGGAAAGCTCACTA +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIYNHFS*YRESSL
Trigger: TAGTGAGCTTTCCCTATATCATGAGAAGTGGTTATA...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATATATGTGTTAGGTGCATaGTCCTTCATCAATAACATG +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIYVLGA*SFINNM
Trigger: CATGTTATTGATGAAGGATCATGCACCTAACACATA...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCACATCAATGATCCTGTaGCAATGCCATCACAAGCTT +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLTSMIL*QCHHKL
Trigger: AAGCTTGTGATGGCATTGGCACAGGATCATTGATGT...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCTGGATGATCCATACTTaGCATGATCAGAGCTTCATC +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLWMIHT*HDQSFI
Trigger: GATGAAGCTCTGATCATGGCAAGTATGGATCATCCA...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAGGGTGGACCATTGGATaGATTGTGATATTCGGGATT +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQGWTIG*IVIFGI
Trigger: AATCCCGAATATCACAATGCATCCAATGGTCCACCC...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACGGGTGGACCATTGGATaGATTGTGATATTCGGGATT +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNGWTIG*IVIFGI
Trigger: AATCCCGAATATCACAATGCATCCAATGGTCCACCC...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAGTCCCTGGATACCGTTaGAAGGTTCCTAATTTGCTT +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQVPGYR*KVPNLL
Trigger: AAGCAAATTAGGAACCTTGCAACGGTATCCAGGGAC...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCAAGTGGAACCATATATaGCTACTTTCAGCTAAACCC +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCKWNHI*LLSAKP
Trigger: GGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTT...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTCCAAAAGAATGGCAATaGAATAGTTTGAAACGCTTG +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPPKEWQ*NSLKRL
Trigger: CAAGCGTTTCAAACTATTGCATTGCCATTCTTTTGG...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACAGCTCTAGGATCCTCTaGCCACAGTATACAGTAGAA +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNSSRIL*PQYTVE
Trigger: TTCTACTGTATACTGTGGGCAGAGGATCCTAGAGCT...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCACCTGGCCCGACACAATaGCCACAACAGCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAPGPTQ*PQQLLV
Trigger: AACAAGAAGCTGTTGTGGGCATTGTGTCGGGCCAGG...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCACAGGAGGTATGATTTaGTTTCCTTCACAAAGGCTA +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCTGGMI*FPSQRL
Trigger: TAGCCTTTGTGAAGGAAAGCAAATCATACCTCCTGT...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAGCTCCAGTTGAAAGGTaGTTGGATTGTAGACAAAGG +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQAPVER*LDCRQR
Trigger: CCTTTGTCTACAATCCAACCACCTTTCAACTGGAGC...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCACACGCACACAAGAACTaGAATCTACCACAAAGTTAT +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPHAHKN*NLPQSY
Trigger: ATAACTTTGTGGTAGATTCCAGTTCTTGTGTGCGTG...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAGTTTCTCTGGGTCTATaGCTTCAATTGCATTGTAAG +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPVSLGL*LQLHCK
Trigger: CTTACAATGCAATTGAAGCCATAGACCCAGAGAAAC...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACGACGTTCAGTTTCTCTaGGTCTATGGCTTCAATTGC +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNDVQFL*VYGFNC
Trigger: GCAATTGAAGCCATAGACCCAGAGAAACTGAACGTC...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACATTTCCTTCAGGGACTaGAACTGTAGAGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNISFRD*NCREVM
Trigger: CATCACCTCTCTACAGTTCCAGTCCCTGAAGGAAAT...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAGTGGCACTCCCGATCTaGATCAGCATACTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQVALPI*ISILEN
Trigger: ATTTTCAAGTATGCTGATCCAGATCGGGAGTGCCAC...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATGAAGTTGAGCTTGATTaGGTGCTGTGCCACTGGGAG +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYEVELD*VLCHWE
Trigger: CTCCCAGTGGCACAGCACCCAATCAAGCTCAACTTC...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCAGCCATCCATTTAATTaGCATCTTTCCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLSHPFN*HLSSIS
Trigger: GCTGATGGAGGAAAGATGCCAATTAAATGGATGGCT...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCTGCTGTCATTTGGACTaGGAAGCTTCATACGATCAT +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLCCHLD*EASYDH
Trigger: ATGATCGTATGAAGCTTCCCAGTCCAAATGACAGCA...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCTGCTGTCATTTGGACTaGGAAGCTTCATACGATCAT +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFCCHLD*EASYDH
Trigger: ATGATCGTATGAAGCTTCCCAGTCCAAATGACAGCA...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATTGCCACAGGAGCTTCTaGAATTGTGCTAGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYCHRSF*NCASWG
Trigger: GCCCCAACTAGCACAATTCCAGAAGCTCCTGTGGCA...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCAGGGTTCTCCTCCACTaGATTCAGGTATTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFRVLLH*IQVFLF
Trigger: AAACAAGAATACCTGAATCCAGTGGAGGAGAACCCT...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAACTCATCCTCGGCCTTaGGTGGACCATTGGATGCAT +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIATHPRP*VDHWMH
Trigger: ATGCATCCAATGGTCCACCCAAGGCCGAGGATGAGT...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAAAGTGTCAAAACTACTaGCCTTGGGGTAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQKCQNY*PWGRRK
Trigger: CTTCCTTCTACCCCAAGGCCAGTAGTTTTGACACTT...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACTTTCTTCCAGTTCAATaGATTCCCTCATTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNFLPVQ*IPSLGH
Trigger: GTGGCCCAATGAGGGAATCCATTGAACTGGAAGAAA...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTGGATGGATGGATGGATaGATTTACTTGTTCAGAATA +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPGWMDG*IYLFRI
Trigger: TATTCTGAACAAGTAAATCCATCCATCCATCCATCC...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAGCATTTGGGTCATTTTaGATTATTCCTACATGCATC +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIAFGSF*IIPTCI
Trigger: GATGCATGTAGGAATAATCCAAAATGACCCAAATGC...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCGATGCTTTGTGGTTCTaGATCTATCCTAGATCAGAG +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLDALWF*IYPRSE
Trigger: CTCTGATCTAGGATAGATCCAGAACCACAAAGCATC...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTATTTATATGTTTACATaGGGCAAGGCTGTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPIYMFT*GKAVLQ
Trigger: TTGAAGGACAGCCTTGCCCCATGTAAACATATAAAT...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAACAGTGTTTCACAAAGTaGGGTGTAGGATCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQQCFTK*GVGSQR
Trigger: TCTCTGAGATCCTACACCCCACTTTGTGAAACACTG...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACTCCCAAAAGGGTTCTTaGAGTGCTATGGTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNSQKGS*SAMVVV
Trigger: GACTACAACCATAGCACTCCAAGAACCCTTTTGGGA...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
3UTR CAA 72 bp GGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTaGTACAGGTACAATTCTTTCCCAAGAGCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: GMRQSSSHSIIA*YRYNSFPRAKR
Trigger: TCTTTTGGCTCTTGGGAAAGAATTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATGTCAAAGTCTGGCAATaGTTTTCTGTGGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYVKVWQ*FSVGPQ
Trigger: CTGGGGACCCACAGAAAATCATTGCCAGACTTTGAC...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAACCCCATGAATACCAGTaGCTAGAAAGATCAAATTCC +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQPHEYQ*LERSNS
Trigger: GGAATTTGATCTTTCTAGTCACTGGTATTCATGGGG...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATCGGACTAGGTGTGGATaGTCCATACTTGCCATGATC +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYRTRCG*SILAMI
Trigger: GATCATGGCAAGTATGGATCATCCACACCTAGTCCG...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCACGGACTAGGTGTGGATaGTCCATACTTGCCATGATC +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIARTRCG*SILAMI
Trigger: GATCATGGCAAGTATGGATCATCCACACCTAGTCCG...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCCCATTGGATGCATTGTaGTATTCGGGATTATCCAAT +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLPLDAL*YSGLSN
Trigger: ATTGGATAATCCCGAATATCACAATGCATCCAATGG...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACACCCATGCAGAGAAATaGAGAAACATTGTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNTHAEK*RNIVVP
Trigger: AGGAACCACAATGTTTCTTCATTTCTCTGCATGGGT...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCGATATTCCATTTATCTaGGTGTTCCCCACAAAACAT +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCDIPFI*VFPTKH
Trigger: ATGTTTTGTGGGGAACACTCAGATAAATGGAATATC...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAGATATTCCATTTATCTaGGTGTTCCCCACAAAACAT +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPDIPFI*VFPTKH
Trigger: ATGTTTTGTGGGGAACACTCAGATAAATGGAATATC...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCGGCAATGCAATAGTTTaGAACGCTTGGTTTAGCATT +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFGNAIV*NAWFSI
Trigger: AATGCTAAACCAAGCGTTTCAAACTATTGCATTGCC...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCTTAACAACTAGAAGCTaGTGTTGTAGGATCAGCTCT +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFLTTRS*CCRISS
Trigger: AGAGCTGATCCTACAACATCAGCTTCTAGTTGTTAA...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCGTATGTGGACATATGTaGGTTTCAAGATTCATCACA +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCVCGHM*VSRFIT
Trigger: TGTGATGAATCTTGAAACTCACATATGTCCACATAC...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCATATGTGTTAGGTGCATaGTCCTTCATCAATAACATG +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPYVLGA*SFINNM
Trigger: CATGTTATTGATGAAGGATCATGCACCTAACACATA...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTCCAATGAATGGTGTCTaGATAACAAAGGAATTTGTT +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPPMNGV*ITKEFV
Trigger: AACAAATTCCTTTGTTATGCAGACACCATTCATTGG...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATGCCGTCACATTGTTCTaGACACACCGTCCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYAVTLF*THRPCQ
Trigger: TTGACAAGGACGGTGTGTGCAGAACAATGTGACGGC...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAGCCGTCACATTGTTCTaGACACACCGTCCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAAVTLF*THRPCQ
Trigger: TTGACAAGGACGGTGTGTGCAGAACAATGTGACGGC...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCAATATAGATGTTTCCTaGGCTGATTTCCTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFNIDVS*ADFLQG
Trigger: TCCCTGAAGGAAATCAGCGCAGGAAACATCTATATT...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACTGGATGATCCATACTTaGCATGATCAGAGCTTCATC +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNWMIHT*HDQSFI
Trigger: GATGAAGCTCTGATCATGGCAAGTATGGATCATCCA...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATCACTGTACCTCTGGGTaGTACTGTCCTCTTGGACAT +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYHCTSG*YCPLGH
Trigger: ATGTCCAAGAGGACAGTAGCACCCAGAGGTACAGTG...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCACATTTCTGAGTATCTaGCAGGTAGACATACCCAAT +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFTFLSI*QVDIPN
Trigger: ATTGGGTATGTCTACCTGGCAGATACTCAGAAATGT...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCACATTTCTGAGTATCTaGCAGGTAGACATACCCAAT +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLTFLSI*QVDIPN
Trigger: ATTGGGTATGTCTACCTGGCAGATACTCAGAAATGT...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAGCAAGGTTCCTAATTTaGTTGGTTTGGCATTTCCAC +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQARFLI*LVWHFH
Trigger: GTGGAAATGCCAAACCAAGCAAATTAGGAACCTTGC...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCATCACAAAAGAGACTATaGAATCTGATTGTTGGAACG +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPSQKRL*NLIVGT
Trigger: CGTTCCAACAATCAGATTGCATAGTCTCTTTTGTGA...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCATGGATTATTCCTACATaGATCTCTAGGTATTACCCA +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPWIIPT*ISRYYP
Trigger: TGGGTAATACCTAGAGATGCATGTAGGAATAATCCA...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCTGGATTATTCCTACATaGATCTCTAGGTATTACCCA +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCWIIPT*ISRYYP
Trigger: TGGGTAATACCTAGAGATGCATGTAGGAATAATCCA...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCATCTGCAAATTTCAATTaGTACAATTGGCCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPSANFN*YNWPLE
Trigger: TTCCAGAGGCCAATTGTAGCAATTGAAATTTGCAGA...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAGTCCAGTTATATACATaGTTTCATGATCACCTTTTC +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIVQLYT*FHDHLF
Trigger: GAAAAGGTGATCATGAAAGCATGTATATAACTGGAC...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTGTCCAGTTATATACATaGTTTCATGATCACCTTTTC +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPVQLYT*FHDHLF
Trigger: GAAAAGGTGATCATGAAAGCATGTATATAACTGGAC...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCAAGTGGAACCATATATaGCTACTTTCAGCTAAACCC +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFKWNHI*LLSAKP
Trigger: GGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTT...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCTACACCTTAAGCCTCTaGCTTTTCAGTAAAGTGACT +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLYTLSL*LFSKVT
Trigger: AGTCACTTTACTGAAAAGGCAGAGGCTTAAGGTGTA...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCTACACCTTAAGCCTCTaGCTTTTCAGTAAAGTGACT +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFYTLSL*LFSKVT
Trigger: AGTCACTTTACTGAAAAGGCAGAGGCTTAAGGTGTA...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCCAGTTGAAAGGTGGTTaGATTGTAGACAAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFQLKGG*IVDKGL
Trigger: CAAACCTTTGTCTACAATCCAACCACCTTTCAACTG...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATATACCACAAAGTTATGTaGACATTTCTTGACACAGAA +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIYHKVM*TFLDTE
Trigger: TTCTGTGTCAAGAAATGTCCACATAACTTTGTGGTA...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCCGGATTACTATTCTCTaGTTGATTGTGCTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLRITIL*LIVLKS
Trigger: ACTCTTCAGCACAATCAACCAGAGAATAGTAATCCG...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATCCCAACAGCCATCACTaGAACACAGATGGTTGCACA +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYPNSHH*NTDGCT
Trigger: TGTGCAACCATCTGTGTTCCAGTGATGGCTGTTGGG...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCACACACTCCACACAGATaGAGCCATTCTCAAACTCCC +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAHTPHR*SHSQTP
Trigger: GGGAGTTTGAGAATGGCTCCATCTGTGTGGAGTGTG...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTTTTTTCCACACAGTTTaGGCCATCTTTAAAATGAGA +
Preference number: 4 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPFFHTV*AIFKMR
Trigger: TCTCATTTTAAAGATGGCCCAAACTGTGTGGAAAAA...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATATTTTTCCACACAGTTTaGGCCATCTTTAAAATGAGA +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSIFFHTV*AIFKMR
Trigger: TCTCATTTTAAAGATGGCCCAAACTGTGTGGAAAAA...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATGGAATGGCCCGTCCATaGGTAGTAAATGCAGTCATG +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYGMARP*VVNAVM
Trigger: CATGACTGCATTTACTACCCATGGACGGGCCATTCC...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATCATGTTGTGGTAAAGTaGAATGGCCCGTCCATGGGT +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYHVVVK*NGPSMG
Trigger: ACCCATGGACGGGCCATTCCACTTTACCACAACATG...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACAGTCAATTCTTGCTCTaGAAGTATAGATGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNSQFLL*KYRWEV
Trigger: CACCTCCCATCTATACTTCCAGAGCAAGAATTGACT...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCACAAAACTACTGGCCTTaGGGTAGAAGGAAGACCACC +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAQNYWP*GRRKTT
Trigger: GGTGGTCTTCCTTCTACCCCAAGGCCAGTAGTTTTG...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACCTCTGTATCTTCCACTaGGAAGTGTCAAAACTACTG +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNLCIFH*EVSKLL
Trigger: CAGTAGTTTTGACACTTCCCAGTGGAAGATACAGAG...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCTTGCCTTACATTTTCTaGTCCTTCTCTAGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFLPYIF*SFSSCF
Trigger: GAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAA...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATACTAATTTGCTTGGTTTaGCATTTCCACAGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: QLEADVVGSALGSSAHSILICLV*HFHSLY
Trigger: ATAAAGACTGTGGAAATGCCAAACCAAGCAAATTAG...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCGTTTGGATGGATGGATaGATGGATTTACTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFVWMDG*MDLLVQ
Trigger: CTGAACAAGTAAATCCATCCATCCATCCATCCAAAC...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCGCATTTGGGTCATTTTaGATTATTCCTACATGCATC +
Preference number: 4 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCAFGSF*IIPTCI
Trigger: GATGCATGTAGGAATAATCCAAAATGACCCAAATGC...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAGATGCTTTGTGGTTCTaGATCTATCCTAGATCAGAG +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQDALWF*IYPRSE
Trigger: CTCTGATCTAGGATAGATCCAGAACCACAAAGCATC...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCATTCGTAGTTGATTACTaGAGTAATCCCAAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPFVVDY*SNPKRV
Trigger: AACCCTTTTGGGATTACTCCAGTAATCAACTACGAA...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCATGTGTACTTTGCATTaGAATTGTGCTCCAGTTGAA +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLMCTLH*NCAPVE
Trigger: TTCAACTGGAGCACAATTTCAATGCAAAGTACACAT...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCATGTGTACTTTGCATTaGAATTGTGCTCCAGTTGAA +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFMCTLH*NCAPVE
Trigger: TTCAACTGGAGCACAATTTCAATGCAAAGTACACAT...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAACCATTGGATGCATTGTaGTATTCGGGATTATCCAAT +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQPLDAL*YSGLSN
Trigger: ATTGGATAATCCCGAATATCACAATGCATCCAATGG...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAGGCCTTCTCTGGCATTaGCAGTATGTTGTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAGLLWH*QYVVLQ
Trigger: CTGAAGAACAACATACTGTCAATGCCAGAGAAGGCC...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACAAGTTTCCTAATTATTaGTGTGAGGCCCCCTTTACT +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNKFPNY*CEAPFT
Trigger: AGTAAAGGGGGCCTCACATCAATAATTAGGAAACTT...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAGGCAATGCAATAGTTTaGAACGCTTGGTTTAGCATT +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQGNAIV*NAWFSI
Trigger: AATGCTAAACCAAGCGTTTCAAACTATTGCATTGCC...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCTTAACAACTAGAAGCTaGTGCACATGGATTTCTCAT +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFLTTRS*CTWISH
Trigger: ATGAGAAATCCATGTGCATCAGCTTCTAGTTGTTAA...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAATTAACAACTAGAAGCTaGTGTTGTAGGATCAGCTCT +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQLTTRS*CCRISS
Trigger: AGAGCTGATCCTACAACATCAGCTTCTAGTTGTTAA...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCACTTACTTGCAAAGCTaGCTGTCAAAGAGTATTTTC +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFTYLQS*LSKSIF
Trigger: GAAAATACTCTTTGACAGTCAGCTTTGCAAGTAAGT...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCGTATGTGGACATATGTaGGTTTCAAGATTCATCACA +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFVCGHM*VSRFIT
Trigger: TGTGATGAATCTTGAAACTCACATATGTCCACATAC...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACGGTGGTTATCAAAGCTaGATAGCCTTTACCTTTATG +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNGGYQS*IAFTFM
Trigger: CATAAAGGTAAAGGCTATTCAGCTTTGATAACCACC...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCTATAACCACTTCTCATaGTATAGGGAAAGCTCACTA +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLYNHFS*YRESSL
Trigger: TAGTGAGCTTTCCCTATATCATGAGAAGTGGTTATA...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCACCAATGAATGGTGTCTaGATAACAAAGGAATTTGTT +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPPMNGV*ITKEFV
Trigger: AACAAATTCCTTTGTTATGCAGACACCATTCATTGG...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCATGGAACACAGATGGTTaGACACCATTCCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAWNTDG*TPFLQQ
Trigger: CTGCTGAAGGAATGGTGTGCAACCATCTGTGTTCCA...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATCATGAACTCCACATTTaGCTTGGGACCAGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYHELHI*LGTSCL
Trigger: GAGACAACTGGTCCCAAGGCAAATGTGGAGTTCATG...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAGATTCTGAAAGAACTTaGTGTCATTTGGACTGGGAA +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQDSERT*CHLDWE
Trigger: TTCCCAGTCCAAATGACAGCAAGTTCTTTCAGAATC...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACATTCGAGTCAATTCTTaGTCTGGAAGTATAGATGGG +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNIRVNS*SGSIDG
Trigger: CCCATCTATACTTCCAGAGCAAGAATTGACTCGAAT...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCTCACAAAAGAGACTATaGAATCTGATTGTTGGAACG +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFSQKRL*NLIVGT
Trigger: CGTTCCAACAATCAGATTGCATAGTCTCTTTTGTGA...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCTCTGCAAATTTCAATTaGTACAATTGGCCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFSANFN*YNWPLE
Trigger: TTCCAGAGGCCAATTGTAGCAATTGAAATTTGCAGA...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCCCAAAAGAATGGCAATaGAATAGTTTGAAACGCTTG +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLPKEWQ*NSLKRL
Trigger: CAAGCGTTTCAAACTATTGCATTGCCATTCTTTTGG...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCCAGGCGATACCAATCTaGATTTATATGTTTACATGG +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFQAIPI*IYMFTW
Trigger: CCATGTAAACATATAAATGCAGATTGGTATCGCCTG...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACACAGGAGGTATGATTTaGTTTCCTTCACAAAGGCTA +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNTGGMI*FPSQRL
Trigger: TAGCCTTTGTGAAGGAAAGCAAATCATACCTCCTGT...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAAAAGGGTTCTTGGAGTaGTATGGTTGTAGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAKGFLE*YGCSPL
Trigger: GAGGGGACTACAACCATAGCACTCCAAGAACCCTTT...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCATACACCATGGGAAAATaGGGTTTCAGCATGCAGCCA +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAYTMGK*GFSMQP
Trigger: TGGCTGCATGCTGAAACCGCATTTTCCCATGGTGTA...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAACACGCACACAAGAACTaGAATCTACCACAAAGTTAT +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQHAHKN*NLPQSY
Trigger: ATAACTTTGTGGTAGATTCCAGTTCTTGTGTGCGTG...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACATTTGTCAATGTTACTaGAATCCACAGTCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNICQCY*NPQSEL
Trigger: CAGCTCAGACTGTGGATTCCAGTAACATTGACAAAT...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCACCTTGGGTGGACCATTaGATGCATTGTGATATTCGG +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAPWVDH*MHCDIR
Trigger: CCGAATATCACAATGCATCCAATGGTCCACCCAAGG...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCATCTCATCATAGTCCCTaGATACCGTTGCAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIASHHSP*IPLQGS
Trigger: GGAACCTTGCAACGGTATCCAGGGACTATGATGAGA...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAGAGGCCCCCTTTACTTaGAGACTCATCTCTGTCATT +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAEAPFT*RLISVI
Trigger: AATGACAGAGATGAGTCTCCAAGTAAAGGGGGCCTC...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATGAGGCCCCCTTTACTTaGAGACTCATCTCTGTCATT +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYEAPFT*RLISVI
Trigger: AATGACAGAGATGAGTCTCCAAGTAAAGGGGGCCTC...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACGTTTGGATGGATGGATaGATGGATTTACTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNVWMDG*MDLLVQ
Trigger: CTGAACAAGTAAATCCATCCATCCATCCATCCAAAC...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCATGTCTCCAATATTCTTaGCCAAGGACCACCATCTGC +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIACLQYS*PRTTIC
Trigger: GCAGATGGTGGTCCTTGGCCAAGAATATTGGAGACA...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCACTTATAGCATTATCGTaGTTCTGTCCAGTTATATAC +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPLIALS*FCPVIY
Trigger: GTATATAACTGGACAGAACCACGATAATGCTATAAG...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAGCAAGTTTTCCCAAGTaGAACCATATATGCCTACTT +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQASFPK*NHICLL
Trigger: AAGTAGGCATATATGGTTCCACTTGGGAAAACTTGC...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCACAGAAGTATAAAAACTaGCCCCATTGTAATATCAGT +
Preference number: 4 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPQKYKN*PHCNIS
Trigger: ACTGATATTACAATGGGGCCAGTTTTTATACTTCTG...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCCAGATCCTACATTTTTaGACCTCTACAAAATCAGTG +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLQILHF*TSTKSV
Trigger: CACTGATTTTGTAGAGGTCCAAAAATGTAGGATCTG...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCTCTACCAAGTGTATGTaGACATATGTGAGTTTCAAG +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLSTKCM*TYVSFK
Trigger: CTTGAAACTCACATATGTCCACATACACTTGGTAGA...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCTTCGTAGTTGATTACTaGAGTAATCCCAAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLFVVDY*SNPKRV
Trigger: AACCCTTTTGGGATTACTCCAGTAATCAACTACGAA...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCTACACCACACACAATTaGCATATCCTATTGTGTAAG +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFYTTHN*HILLCK
Trigger: CTTACACAATAGGATATGCCAATTGTGTGTGGTGTA...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATATGCTCCACTGTCATTaGAATTCATGCAGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYMLHCH*NSCRQS
Trigger: GCTTTGCCTGCATGAATTTCAATGACAGTGGAGCAT...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACATGTGTACTTTGCATTaGAATTGTGCTCCAGTTGAA +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNMCTLH*NCAPVE
Trigger: TTCAACTGGAGCACAATTTCAATGCAAAGTACACAT...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATAACCTGTTATCTCTCTaGCTGTCCGAAAGACGTTCA +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYNLLSL*LSERRS
Trigger: TGAACGTCTTTCGGACAGTCAGAGAGATAACAGGTT...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAATCATCCAAGAGATTCTaGAAGAACTTGCTGTCATTT +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQSSKRF*KNLLSF
Trigger: AAATGACAGCAAGTTCTTTCAGAATCTCTTGGATGA...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACTCATCCAAGAGATTCTaGAAGAACTTGCTGTCATTT +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNSSKRF*KNLLSF
Trigger: AAATGACAGCAAGTTCTTTCAGAATCTCTTGGATGA...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAATTTATTTACAACTTTTaGCCCAAGGACCTATCCCTA +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQFIYNF*PKDLSL
Trigger: TAGGGATAGGTCCTTGGGTCAAAAGTTGTAAATAAA...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCACCCTCTTATACATGCTaGAATATGTTTTCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAPSYTC*NMFSQG
Trigger: CCCCTGGGAAAACATATTTCAGCATGTATAAGAGGG...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACTTAACAACTAGAAGCTaGTGCACATGGATTTCTCAT +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNLTTRS*CTWISH
Trigger: ATGAGAAATCCATGTGCATCAGCTTCTAGTTGTTAA...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACACTTACTTGCAAAGCTaGCTGTCAAAGAGTATTTTC +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNTYLQS*LSKSIF
Trigger: GAAAATACTCTTTGACAGTCAGCTTTGCAAGTAAGT...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACTATAACCACTTCTCATaGTATAGGGAAAGCTCACTA +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNYNHFS*YRESSL
Trigger: TAGTGAGCTTTCCCTATATCATGAGAAGTGGTTATA...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAATCTGGAAATGACATTTaGAAACCAGATTCGTGTCAA +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQSGNDI*KPDSCQ
Trigger: TTGACACGAATCTGGTTTTCAAATGTCATTTCCAGA...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCACCAAAAGAGGATCCTTaGGAACTAACGGAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAPKEDP*ELTEKP
Trigger: AGGCTTTTCCGTTAGTTCTCAAGGATCCTCTTTTGG...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCCCAATGAATGGTGTCTaGATAACAAAGGAATTTGTT +
Preference number: 4 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLPMNGV*ITKEFV
Trigger: AACAAATTCCTTTGTTATGCAGACACCATTCATTGG...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAGTCCCTGGATACCGTTaGAAGGTTCCTAATTTGCTT +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAVPGYR*KVPNLL
Trigger: AAGCAAATTAGGAACCTTGCAACGGTATCCAGGGAC...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCGTCCAGTTATATACATaGTTTCATGATCACCTTTTC +
Preference number: 4 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFVQLYT*FHDHLF
Trigger: GAAAAGGTGATCATGAAAGCATGTATATAACTGGAC...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACCCAAAAGAATGGCAATaGAATAGTTTGAAACGCTTG +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNPKEWQ*NSLKRL
Trigger: CAAGCGTTTCAAACTATTGCATTGCCATTCTTTTGG...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAACAGGCGATACCAATCTaGATTTATATGTTTACATGG +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQQAIPI*IYMFTW
Trigger: CCATGTAAACATATAAATGCAGATTGGTATCGCCTG...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCACAAGTTGGAAGGCCATaGGTTCCGAACAATATCTTG +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAQVGRP*VPNNIL
Trigger: CAAGATATTGTTCGGAACCCATGGCCTTCCAACTTG...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAGAACTTGCTGTCATTTaGACTGGGAAGCTTCATACG +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAELAVI*TGKLHT
Trigger: CGTATGAAGCTTCCCAGTCCAAATGACAGCAAGTTC...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATGAACTTGCTGTCATTTaGACTGGGAAGCTTCATACG +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYELAVI*TGKLHT
Trigger: CGTATGAAGCTTCCCAGTCCAAATGACAGCAAGTTC...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACGGATGGATGGATGGATaGATTTACTTGTTCAGAATA +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNGWMDG*IYLFRI
Trigger: TATTCTGAACAAGTAAATCCATCCATCCATCCATCC...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAGGATGGATGGATGGATaGATTTACTTGTTCAGAATA +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQGWMDG*IYLFRI
Trigger: TATTCTGAACAAGTAAATCCATCCATCCATCCATCC...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACGCATTTGGGTCATTTTaGATTATTCCTACATGCATC +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNAFGSF*IIPTCI
Trigger: GATGCATGTAGGAATAATCCAAAATGACCCAAATGC...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACATTTATATGTTTACATaGGGCAAGGCTGTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNIYMFT*GKAVLQ
Trigger: TTGAAGGACAGCCTTGCCCCATGTAAACATATAAAT...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAATTTATATGTTTACATaGGGCAAGGCTGTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQIYMFT*GKAVLQ
Trigger: TTGAAGGACAGCCTTGCCCCATGTAAACATATAAAT...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAACAGATCCTACATTTTTaGACCTCTACAAAATCAGTG +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQQILHF*TSTKSV
Trigger: CACTGATTTTGTAGAGGTCCAAAAATGTAGGATCTG...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCACAGTGTTTCACAAAGTaGGGTGTAGGATCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAQCFTK*GVGSQR
Trigger: TCTCTGAGATCCTACACCCCACTTTGTGAAACACTG...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAATACACCACACACAATTaGCATATCCTATTGTGTAAG +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQYTTHN*HILLCK
Trigger: CTTACACAATAGGATATGCCAATTGTGTGTGGTGTA...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCACGTCACTCTGATGGGTaGATTTCCTGTAATGTATAC +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIARHSDG*ISCNVY
Trigger: GTATACATTACAGGAAATTCACCCATCAGAGTGACG...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAATTCGAGGGCAAAGATaGAGTCAGTGTTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAIRGQR*SQCFTK
Trigger: CTTTGTGAAACACTGACTTCATCTTTGCCCTCGAAT...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCATGCTCAAGAAAGAGATaGACTAGTCATACACCATGG +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIACSRKR*TSHTPW
Trigger: CCATGGTGTATGACTAGTTCATCTCTTTCTTGAGCA...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAATGATCAGTATGGAATaGGGCAAAGCAGTTCGCATT +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAMISME*GKAVRI
Trigger: AATGCGAACTGCTTTGCCTCATTCCATACTGATCAT...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAACATCAATGATCCTGTaGCAATGCCATCACAAGCTT +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIATSMIL*QCHHKL
Trigger: AAGCTTGTGATGGCATTGGCACAGGATCATTGATGT...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATGCAAGGTTCCTAATTTaGTTGGTTTGGCATTTCCAC +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYARFLI*LVWHFH
Trigger: GTGGAAATGCCAAACCAAGCAAATTAGGAACCTTGC...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATCTTTTGTGGTGCAGATaGTTTGTGGTTCTGGATCTA +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYLLWCR*FVVLDL
Trigger: TAGATCCAGAACCACAAAGCATCTGCACCACAAAAG...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATGTGCTACTAATACTATaGAGAAAACCAGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYVLLIL*RKPGAA
Trigger: AGCAGCTCCTGGTTTTCTGCATAGTATTAGTAGCAC...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAATATGCACAATCTTCATaGCATGTCTTTCCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQYAQSS*HVFPLE
Trigger: TTCTAAAGGAAAGACATGGCATGAAGATTGTGCATA...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAATTCGCATTCTATAATTaGCTTGTACAGGTACAATTC +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQFAFYN*LVQVQF
Trigger: GAATTGTACCTGTACAAGGCAATTATAGAATGCGAA...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAATACCACAAAGTTATGTaGACATTTCTTGACACAGAA +
Preference number: 4 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQYHKVM*TFLDTE
Trigger: TTCTGTGTCAAGAAATGTCCACATAACTTTGTGGTA...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAAGCCATCCATTTAATTaGCATCTTTCCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIASHPFN*HLSSIS
Trigger: GCTGATGGAGGAAAGATGCCAATTAAATGGATGGCT...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAAGGGATTTCTCGCGTTaGAATTCCATCATAGGGTTT +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIARDFSR*NSIIGF
Trigger: AAACCCTATGATGGAATTCCAACGCGAGAAATCCCT...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACAATGAAGAAACATTGTaGTTCCTCCTATCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNNEETL*FLLSFS
Trigger: AGAGAAAGATAGGAGGAACCACAATGTTTCTTCATT...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATATGAAGATAATGTGCTaGCCTCTCATCATAGTCCCT +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYMKIMC*PLIIVP
Trigger: AGGGACTATGATGAGAGGCCAGCACATTATCTTCAT...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACCAGAAGTATAAAAACTaGCCCCATTGTAATATCAGT +
Preference number: 4 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNQKYKN*PHCNIS
Trigger: ACTGATATTACAATGGGGCCAGTTTTTATACTTCTG...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAACTAGTCATACACCATaGGAAAATGCGGTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIATSHTP*ENAVSA
Trigger: TGCTGAAACCGCATTTTCCCATGGTGTATGACTAGT...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATTATGTGGACATTTCTTaGCACAGAATGCTCCATATG +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYYVDIS*HRMLHM
Trigger: CATATGGAGCATTCTGTGTCAAGAAATGTCCACATA...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAAAGGACACAGAGAATTaGTCTTCATGGGAAACCATA +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAKDTEN*SSWETI
Trigger: TATGGTTTCCCATGAAGATCAATTCTCTGTGTCCTT...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATGGTGGTTATCAAAGCTaGATAGCCTTTACCTTTATG +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYGGYQS*IAFTFM
Trigger: CATAAAGGTAAAGGCTATTCAGCTTTGATAACCACC...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATAATATAGATGTTTCCTaGGCTGATTTCCTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYNIDVS*ADFLQG
Trigger: TCCCTGAAGGAAATCAGCGCAGGAAACATCTATATT...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAAATATAGATGTTTCCTaGGCTGATTTCCTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIANIDVS*ADFLQG
Trigger: TCCCTGAAGGAAATCAGCGCAGGAAACATCTATATT...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATGATTCTGAAAGAACTTaGTGTCATTTGGACTGGGAA +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYDSERT*CHLDWE
Trigger: TTCCCAGTCCAAATGACAGCAAGTTCTTTCAGAATC...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATATTCGAGTCAATTCTTaGTCTGGAAGTATAGATGGG +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYIRVNS*SGSIDG
Trigger: CCCATCTATACTTCCAGAGCAAGAATTGACTCGAAT...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAACATTTCTGAGTATCTaGCAGGTAGACATACCCAAT +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIATFLSI*QVDIPN
Trigger: ATTGGGTATGTCTACCTGGCAGATACTCAGAAATGT...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATAAGTGGAACCATATATaGCTACTTTCAGCTAAACCC +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYKWNHI*LLSAKP
Trigger: GGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTT...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATCGGATTACTATTCTCTaGTTGATTGTGCTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYRITIL*LIVLKS
Trigger: ACTCTTCAGCACAATCAACCAGAGAATAGTAATCCG...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCATTTATTTACAACTTTTaGCCCAAGGACCTATCCCTA +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAFIYNF*PKDLSL
Trigger: TAGGGATAGGTCCTTGGGTCAAAAGTTGTAAATAAA...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAGTATGTGGACATATGTaGGTTTCAAGATTCATCACA +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAVCGHM*VSRFIT
Trigger: TGTGATGAATCTTGAAACTCACATATGTCCACATAC...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATTCTGGAAATGACATTTaGAAACCAGATTCGTGTCAA +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYSGNDI*KPDSCQ
Trigger: TTGACACGAATCTGGTTTTCAAATGTCATTTCCAGA...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR TCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATTATGTGTTAGGTGCATaGTCCTTCATCAATAACATG +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYYVLGA*SFINNM
Trigger: CATGTTATTGATGAAGGATCATGCACCTAACACATA...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCATCTGCAAATTTCAATTaGTACAATTGGCCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIASANFN*YNWPLE
Trigger: TTCCAGAGGCCAATTGTAGCAATTGAAATTTGCAGA...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCACAGGCGATACCAATCTaGATTTATATGTTTACATGG +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAQAIPI*IYMFTW
Trigger: CCATGTAAACATATAAATGCAGATTGGTATCGCCTG...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCACAGATCCTACATTTTTaGACCTCTACAAAATCAGTG +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAQILHF*TSTKSV
Trigger: CACTGATTTTGTAGAGGTCCAAAAATGTAGGATCTG...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATTCTACCAAGTGTATGTaGACATATGTGAGTTTCAAG +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYSTKCM*TYVSFK
Trigger: CTTGAAACTCACATATGTCCACATACACTTGGTAGA...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATTATGCACAATCTTCATaGCATGTCTTTCCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYYAQSS*HVFPLE
Trigger: TTCTAAAGGAAAGACATGGCATGAAGATTGTGCATA...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR GCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATTTCGCATTCTATAATTaGCTTGTACAGGTACAATTC +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYFAFYN*LVQVQF
Trigger: GAATTGTACCTGTACAAGGCAATTATAGAATGCGAA...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATTACCACAAAGTTATGTaGACATTTCTTGACACAGAA +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYYHKVM*TFLDTE
Trigger: TTCTGTGTCAAGAAATGTCCACATAACTTTGTGGTA...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATTTTTTCCACACAGTTTaGGCCATCTTTAAAATGAGA +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYFFHTV*AIFKMR
Trigger: TCTCATTTTAAAGATGGCCCAAACTGTGTGGAAAAA...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
34% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATAATGAAGAAACATTGTaGTTCCTCCTATCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYNEETL*FLLSFS
Trigger: AGAGAAAGATAGGAGGAACCACAATGTTTCTTCATT...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCACAGAAGTATAAAAACTaGCCCCATTGTAATATCAGT +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAQKYKN*PHCNIS
Trigger: ACTGATATTACAATGGGGCCAGTTTTTATACTTCTG...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAAAAAAGAATTGCAGGTaGTTATCAAAGCTGAATAGC +
Preference number: 4 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAKKNCR*LSKLNS
Trigger: GCTATTCAGCTTTGATAACCACCTGCAATTCTTTTT...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
34% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CCA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATAAAAAGAATTGCAGGTaGTTATCAAAGCTGAATAGC +
Preference number: 4 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYKKNCR*LSKLNS
Trigger: GCTATTCAGCTTTGATAACCACCTGCAATTCTTTTT...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS TCA 90 bp CCGCGCCCGCGGGTCCAGGGCCGGGGCCCGAGGAGGGGGCGAGTGTaGGCGCGTGTGTGCGCGTGTGGGAGTGTGCTCGGTGTGTGCGCT +
Preference number: 5 (lower is better)
Translates to: PRPRVQGRGPRRGRV*ARVCACGSVLGVCA
Trigger: AGCGCACACACCGAGCACACTCCCACACGCGCACACACGCGCTCACACTCGCCCCCTCCTCGGGCCCCGGCCCTGGACCCGCGGGCGCGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342788.9
ENST00000436443.5
CDS CCA 90 bp CCGGGGCCCGAGGAGGGGGCGAGTGTGAGCGCGTGTGTGCGCGTGTaGGAGTGTGCTCGGTGTGTGCGCTTGGCGCTCTGGGCCGGACTG +
Preference number: 5 (lower is better)
Translates to: PGPEEGASVSACVRV*ECARCVRLALWAGL
Trigger: CAGTCCGGCCCAGAGCGCCAAGCGCACACACCGAGCACACTCCCACACGCGCACACACGCGCTCACACTCGCCCCCTCCTCGGGCCCCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342788.9
ENST00000436443.5
CDS GCA 90 bp CGAGGAGGGGGCGAGTGTGAGCGCGTGTGTGCGCGTGTGGGAGTGTaGTCGGTGTGTGCGCTTGGCGCTCTGGGCCGGACTGTGCAGCTA +
Preference number: 5 (lower is better)
Translates to: RGGGECERVCARVGV*SVCALGALGRTVQL
Trigger: TAGCTGCACAGTCCGGCCCAGAGCGCCAAGCGCACACACCGAGCACACTCCCACACGCGCACACACGCGCTCACACTCGCCCCCTCCTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436443.5
CDS CCA 90 bp CCTCATCCAGCTCTCCTCGTGGGCTCCGTTCTGGGGCAAACACGGTaGGGTCAGCACTGTACCTCTGGGTGCTACTGTCCTCTTGGACAT +
Preference number: 5 (lower is better)
Translates to: PHPALLVGSVLGQTR*GQHCTSGCYCPLGH
Trigger: ATGTCCAAGAGGACAGTAGCACCCAGAGGTACAGTGCTGACCCCACCGTGTTTGCCCCAGAACGGAGCCCACGAGGAGAGCTGGATGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CCA 90 bp GTGGGGTCAGCACTGTACCTCTGGGTGCTACTGTCCTCTTGGACATaGGGTGCCACTGGCTTGCGTAGGGTGCCATTACAGCAGGAGTCA +
Preference number: 5 (lower is better)
Translates to: VGSALYLWVLLSSWT*GATGLRRVPLQQES
Trigger: TGACTCCTGCTGTAATGGCACCCTACGCAAGCCAGTGGCACCCCATGTCCAAGAGGACAGTAGCACCCAGAGGTACAGTGCTGACCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CCA 90 bp AACACGGTGGGGTCAGCACTGTACCTCTGGGTGCTACTGTCCTCTTaGACATGGGGTGCCACTGGCTTGCGTAGGGTGCCATTACAGCAG +
Preference number: 5 (lower is better)
Translates to: NTVGSALYLWVLLSS*TWGATGLRRVPLQQ
Trigger: CTGCTGTAATGGCACCCTACGCAAGCCAGTGGCACCCCATGTCCAAGAGGACAGTAGCACCCAGAGGTACAGTGCTGACCCCACCGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCGCGACACGACAGACATaGGTCTGGCCCAGGTCCCCA +
Preference number: 5 (lower is better)
Translates to: MSPGQELGEAGACKSDRSATRQT*VWPRSP
Trigger: TGGGGACCTGGGCCAGACCAATGTCTGTCGTGTCGC...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CCA 90 bp AGTCATGTAACCTTCCTCATCCAGCTCTCCTCGTGGGCTCCGTTCTaGGGCAAACACGGTGGGGTCAGCACTGTACCTCTGGGTGCTACT +
Preference number: 5 (lower is better)
Translates to: SHVTFLIQLSSWAPF*GKHGGVSTVPLGAT
Trigger: AGTAGCACCCAGAGGTACAGTGCTGACCCCACCGTGTTTGCCCCAGAACGGAGCCCACGAGGAGAGCTGGATGAGGAAGGTTACATGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CCA 90 bp GTCTCGCATAGGAGTCATGTAACCTTCCTCATCCAGCTCTCCTCGTaGGCTCCGTTCTGGGGCAAACACGGTGGGGTCAGCACTGTACCT +
Preference number: 5 (lower is better)
Translates to: VSHRSHVTFLIQLSS*APFWGKHGGVSTVP
Trigger: AGGTACAGTGCTGACCCCACCGTGTTTGCCCCAGAACGGAGCCCACGAGGAGAGCTGGATGAGGAAGGTTACATGACTCCTATGCGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCTGGGGTGCCACTGGCTaGCGTAGGGTGCCATTACAG +
Preference number: 5 (lower is better)
Translates to: MSPGQELGEAGACKSDRSWGATG*RRVPLQ
Trigger: CTGTAATGGCACCCTACGCAAGCCAGTGGCACCCCA...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCGGTGCTACTGTCCTCTaGGACATGGGGTGCCACTGG +
Preference number: 5 (lower is better)
Translates to: MSPGQELGEAGACKSDRSGATVL*DMGCHW
Trigger: CCAGTGGCACCCCATGTCCAAGAGGACAGTAGCACC...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CCA 90 bp GCAGATCCTTCCTCTACTGAAGCGGCGACACGACAGACATTGGTCTaGCCCAGGTCCCCAACAGCCATCACTGGAACACAGATGGTTGCA +
Preference number: 5 (lower is better)
Translates to: ADPSSTEAATRQTLV*PRSPTAITGTQMVA
Trigger: TGCAACCATCTGTGTTCCAGTGATGGCTGTTGGGGACCTGGGCCAGACCAATGTCTGTCGTGTCGCCGCTTCAGTAGAGGAAGGATCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS CCA 90 bp CCCGGTCCATGGCATGTGAGGAGGCCATCTTCCATCTTCTCACACTaGGGGTCACACTCCACACAGATGGAGCCATTCTCAAACTCCCGA +
Preference number: 5 (lower is better)
Translates to: PGPWHVRRPSSIFSH*GSHSTQMEPFSNSR
Trigger: TCGGGAGTTTGAGAATGGCTCCATCTGTGTGGAGTGTGACCCCCAGTGTGAGAAGATGGAAGATGGCCTCCTCACATGCCATGGACCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS CCA 90 bp GCTGTACTCCTGCAGGTAGTCTGGGTGCTGAAGGGTGCTCCGAGGTaGCAGGCTGTGGTTCCAGTAGTCAGGGTTGTCAAACGCTTTCTT +
Preference number: 5 (lower is better)
Translates to: AVLLQVVWVLKGAPR*QAVVPVVRVVKRFL
Trigger: AAGAAAGCGTTTGACAACCCTGACTACTGGAACCACAGCCTGCCACCTCGGAGCACCCTTCAGCACCCAGACTACCTGCAGGAGTACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTGCTCGGTGTGTGCGCTaGGCGCTCTGGGCCGGACTG +
Preference number: 5 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPARCVR*ALWAGL
Trigger: CAGTCCGGCCCAGAGCGCCAAGCGCACACACCGAGC...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342788.9
ENST00000436443.5
CDS GCA 90 bp CCTGTGACTTCTCGAACAGACCGCAGGAAGGAGAGGTCCCGGTTGTaGTCAATGCTGGTTATCTCCAGGTTGCCCATGACAACCTCACAG +
Preference number: 5 (lower is better)
Translates to: PVTSRTDRRKERSRL*SMLVISRLPMTTSQ
Trigger: CTGTGAGGTTGTCATGGGCAACCTGGAGATAACCAGCATTGAGCACAACCGGGACCTCTCCTTCCTGCGGTCTGTTCGAGAAGTCACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000435846.1
ENST00000436443.5
ENST00000484594.5
CDS CCA 90 bp TCTATGCAGATCCTTCCTCTACTGAAGCGGCGACACGACAGACATTaGTCTGGCCCAGGTCCCCAACAGCCATCACTGGAACACAGATGG +
Preference number: 5 (lower is better)
Translates to: SMQILPLLKRRHDRH*SGPGPQQPSLEHRW
Trigger: CCATCTGTGTTCCAGTGATGGCTGTTGGGGACCTGGGCCAGACCAATGTCTGTCGTGTCGCCGCTTCAGTAGAGGAAGGATCTGCATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS CCA 90 bp AGCAGTAGCACCCTGTGCCACAGGAGCTTCTGGAATTGTGCTAGTTaGGGCTCTGTAGGGCACAGACACTCCTTGTTCAGCAGCAAAACC +
Preference number: 5 (lower is better)
Translates to: SSSTLCHRSFWNCAS*GSVGHRHSLFSSKT
Trigger: GGTTTTGCTGCTGAACAAGGAGTGTCTGTGCCCTACAGAGCCCCAACTAGCACAATTCCAGAAGCTCCTGTGGCACAGGGTGCTACTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCCTGGTTATCTCCAGGTaGCCCATGACAACCTCACAG +
Preference number: 5 (lower is better)
Translates to: MSPGQELGEAGACKSDRSLVISR*PMTTSQ
Trigger: CTGTGAGGTTGTCATGGGCAACCTGGAGATAACCAG...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCGTGATGCCCTGTTGCTaGAGGATAAGCAAGGACAGG +
Preference number: 5 (lower is better)
Translates to: MSPGQELGEAGACKSDRSVMPCC*RISKDR
Trigger: CCTGTCCTTGCTTATCCTCAAGCAACAGGGCATCAC...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCCGCCGGCTTCATTTTTaGGAAGTCTCAGATCCCGTG +
Preference number: 5 (lower is better)
Translates to: MSPGQELGEAGACKSDRSRRLHF*EVSDPV
Trigger: CACGGGATCTGAGACTTCCAAAAAATGAAGCCGGCG...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342788.9
ENST00000436443.5
CDS-3UTR CAA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCGGTCTCGAGCCATCCTaGAAAACTCAGCAGCCAGTT +
Preference number: 5 (lower is better)
Translates to: MSPGQELGEAGACKSDRSGLEPS*KTQQPV
Trigger: AACTGGCTGCTGAGTTTTCAAGGATGGCTCGAGACC...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS TCA 90 bp CACCATCATAGAGGTTACAAGACTCTATGCAGATCCTTCCTCTACTaGAGCGGCGACACGACAGACATTGGTCTGGCCCAGGTCCCCAAC +
Preference number: 5 (lower is better)
Translates to: HHHRGYKTLCRSFLY*SGDTTDIGLAQVPN
Trigger: GTTGGGGACCTGGGCCAGACCAATGTCTGTCGTGTCGCCGCTTCAGTAGAGGAAGGATCTGCATAGAGTCTTGTAACCTCTATGATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS GCA 90 bp AATATTTTGTGCTGTACTCCTGCAGGTAGTCTGGGTGCTGAAGGGTaGTCCGAGGTGGCAGGCTGTGGTTCCAGTAGTCAGGGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: NILCCTPAGSLGAEG*SEVAGCGSSSQGCQ
Trigger: TTGACAACCCTGACTACTGGAACCACAGCCTGCCACCTCGGAGCACCCTTCAGCACCCAGACTACCTGCAGGAGTACAGCACAAAATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCGCTTTTCCCAAGGTGTaGGCAAAGGTGTTGAGGTAC +
Preference number: 5 (lower is better)
Translates to: MSPGQELGEAGACKSDRSAFPKV*AKVLRY
Trigger: GTACCTCAACACCTTTGCCAACACCTTGGGAAAAGC...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS GCA 90 bp GCCATTACAGCAGGAGTCATCAAAAATCTCAGCAGTAGCACCCTGTaGCACAGGAGCTTCTGGAATTGTGCTAGTTGGGGCTCTGTAGGG +
Preference number: 5 (lower is better)
Translates to: AITAGVIKNLSSSTL*HRSFWNCASWGSVG
Trigger: CCCTACAGAGCCCCAACTAGCACAATTCCAGAAGCTCCTGTGGCACAGGGTGCTACTGCTGAGATTTTTGATGACTCCTGCTGTAATGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS GCA 90 bp GGTGCGTTTCGCTATCTCTTATCTTTTGCCTATAGTCACAGTGCCTaGCAGGCAGAAGAGCACCCCTTCCAGGTATCAGCACACAGGTCT +
Preference number: 5 (lower is better)
Translates to: GAFRYLLSFAYSHSA*QAEEHPFQVSAHRS
Trigger: AGACCTGTGTGCTGATACCTGGAAGGGGTGCTCTTCTGCCTGGCAGGCACTGTGACTATAGGCAAAAGATAAGAGATAGCGAAACGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459774.1
CDS CCA 90 bp GTCATCAAAAATCTCAGCAGTAGCACCCTGTGCCACAGGAGCTTCTaGAATTGTGCTAGTTGGGGCTCTGTAGGGCACAGACACTCCTTG +
Preference number: 5 (lower is better)
Translates to: VIKNLSSSTLCHRSF*NCASWGSVGHRHSL
Trigger: CAAGGAGTGTCTGTGCCCTACAGAGCCCCAACTAGCACAATTCCAGAAGCTCCTGTGGCACAGGGTGCTACTGCTGAGATTTTTGATGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCGGTCTATGGCTTCAATaGCATTGTAAGGGTCCCCAT +
Preference number: 5 (lower is better)
Translates to: MSPGQELGEAGACKSDRSGLWLQ*HCKGPH
Trigger: ATGGGGACCCTTACAATGCAATTGAAGCCATAGACC...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCAATACGAAGTTGAGCTaGATTGGGTGCTGTGCCACT +
Preference number: 5 (lower is better)
Translates to: MSPGQELGEAGACKSDRSNTKLS*IGCCAT
Trigger: AGTGGCACAGCACCCAATCAAGCTCAACTTCGTATT...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCCAGGGATTTCTCGCGTaGGAATTCCATCATAGGGTT +
Preference number: 5 (lower is better)
Translates to: MSPGQELGEAGACKSDRSQGFLA*EFHHRV
Trigger: AACCCTATGATGGAATTCCAACGCGAGAAATCCCTG...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATATGGGGTGCCACTGGCTaGCGTAGGGTGCCATTACAG +
Preference number: 5 (lower is better)
Translates to: QLEADVVGSALGSSAHSIWGATG*RRVPLQ
Trigger: CTGTAATGGCACCCTACGCAAGCCAGTGGCACCCCA...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CCA 90 bp GACACGACAGACATTGGTCTGGCCCAGGTCCCCAACAGCCATCACTaGAACACAGATGGTTGCACACCATTCCTTCAGCAGTACAATTTT +
Preference number: 5 (lower is better)
Translates to: DTTDIGLAQVPNSHH*NTDGCTPFLQQYNF
Trigger: AAAATTGTACTGCTGAAGGAATGGTGTGCAACCATCTGTGTTCCAGTGATGGCTGTTGGGGACCTGGGCCAGACCAATGTCTGTCGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS-3UTR CAA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCGTTCCGAACAATATCTaGCCAATGAATGGTGTCTGC +
Preference number: 5 (lower is better)
Translates to: MSPGQELGEAGACKSDRSVPNNI*PMNGVC
Trigger: GCAGACACCATTCATTGGCAAGATATTGTTCGGAAC...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAGGGACCGTTACACCCTaGGGTGCAGTTTGGATGGCA +
Preference number: 5 (lower is better)
Translates to: QLEADVVGSALGSSAHSIGTVTP*GAVWMA
Trigger: TGCCATCCAAACTGCACCCAAGGGTGTAACGGTCCC...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCAACTCCACATTTGCCTaGGGACCAGTTGTCTCATTA +
Preference number: 5 (lower is better)
Translates to: MSPGQELGEAGACKSDRSNSTFA*GPVVSL
Trigger: TAATGAGACAACTGGTCCCAAGGCAAATGTGGAGTT...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCTGGGGTGCCACTGGCTaGCGTAGGGTGCCATTACAG +
Preference number: 5 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCWGATG*RRVPLQ
Trigger: CTGTAATGGCACCCTACGCAAGCCAGTGGCACCCCA...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS TCA 90 bp TGTTCTTCAGGTACTCAGCTTTTCCCAAGGTGTTGGCAAAGGTGTTaGGGTACAGTGGCTCATTCACATACTCATCCTCGGCCTTGGGTG +
Preference number: 5 (lower is better)
Translates to: CSSGTQLFPRCWQRC*GTVAHSHTHPRPWV
Trigger: CACCCAAGGCCGAGGATGAGTATGTGAATGAGCCACTGTACCTCAACACCTTTGCCAACACCTTGGGAAAAGCTGAGTACCTGAAGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS GCA 90 bp CAAATTGAGTGTCTTGTGAGGACCCACTCCTTGAGGCCAGTGTCTTaGTATGTTTTCACACAGCAGAAGGGGCAAGGGATCTCTCTAGGT +
Preference number: 5 (lower is better)
Translates to: QIECLVRTHSLRPVS*YVFTQQKGQGISLG
Trigger: ACCTAGAGAGATCCCTTGCCCCTTCTGCTGTGTGAAAACATAGCAAGACACTGGCCTCAAGGAGTGGGTCCTCACAAGACACTCAATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484474.1
CDS CCA 90 bp GGCCATCTTCCATCTTCTCACACTGGGGGTCACACTCCACACAGATaGAGCCATTCTCAAACTCCCGAAATTCACCATCATAGAGGTTAC +
Preference number: 5 (lower is better)
Translates to: GHLPSSHTGGHTPHR*SHSQTPEIHHHRGY
Trigger: GTAACCTCTATGATGGTGAATTTCGGGAGTTTGAGAATGGCTCCATCTGTGTGGAGTGTGACCCCCAGTGTGAGAAGATGGAAGATGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS CCA 90 bp GTGGCAGGCTGTGGTTCCAGTAGTCAGGGTTGTCAAACGCTTTCTTaGCCTTCTCTGGCATTGACAGTATGTTGTTCTTCAGGTACTCAG +
Preference number: 5 (lower is better)
Translates to: VAGCGSSSQGCQTLS*PSLALTVCCSSGTQ
Trigger: CTGAGTACCTGAAGAACAACATACTGTCAATGCCAGAGAAGGCCAAGAAAGCGTTTGACAACCCTGACTACTGGAACCACAGCCTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTGCATCTGCCGTCACATaGTTCTGCACACACCGTCCT +
Preference number: 5 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPASAVT*FCTHRP
Trigger: AGGACGGTGTGTGCAGAACAATGTGACGGCAGATGC...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACGCGACACGACAGACATaGGTCTGGCCCAGGTCCCCA +
Preference number: 5 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNATRQT*VWPRSP
Trigger: TGGGGACCTGGGCCAGACCAATGTCTGTCGTGTCGC...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAGAGCACTTTGTACAGTaGTCAGGACCCGGTCCATGG +
Preference number: 5 (lower is better)
Translates to: QLEADVVGSALGSSAHSIEHFVQ*SGPGPW
Trigger: CCATGGACCGGGTCCTGACAACTGTACAAAGTGCTC...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTGAGCACTTTGTACAGTaGTCAGGACCCGGTCCATGG +
Preference number: 5 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPEHFVQ*SGPGPW
Trigger: CCATGGACCGGGTCCTGACAACTGTACAAAGTGCTC...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATGCTCGGTGTGTGCGCTaGGCGCTCTGGGCCGGACTG +
Preference number: 5 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYARCVR*ALWAGL
Trigger: CAGTCCGGCCCAGAGCGCCAAGCGCACACACCGAGC...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342788.9
ENST00000436443.5
CDS-3UTR CAA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCGGTGCTACTGTCCTCTaGGACATGGGGTGCCACTGG +
Preference number: 5 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFGATVL*DMGCHW
Trigger: CCAGTGGCACCCCATGTCCAAGAGGACAGTAGCACC...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTTACTCATCCTCGGCCTaGGGTGGACCATTGGATGCA +
Preference number: 5 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPYSSSA*GGPLDA
Trigger: TGCATCCAATGGTCCACCCAAGGCCGAGGATGAGTA...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCAGGTTCCTAATTTGCTaGGTTTGGCATTTCCACAGT +
Preference number: 5 (lower is better)
Translates to: MSPGQELGEAGACKSDRSRFLIC*VWHFHS
Trigger: ACTGTGGAAATGCCAAACCAAGCAAATTAGGAACCT...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCACTGCTAAAAGATATTaGCCCACACAAACACAAGGG +
Preference number: 5 (lower is better)
Translates to: MSPGQELGEAGACKSDRSTAKRY*PTQTQG
Trigger: CCCTTGTGTTTGTGTGGGCAAATATCTTTTAGCAGT...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAAAGGAGAGGTCCCGGTaGTGCTCAATGCTGGTTATC +
Preference number: 5 (lower is better)
Translates to: QLEADVVGSALGSSAHSIKERSR*CSMLVI
Trigger: GATAACCAGCATTGAGCACAACCGGGACCTCTCCTT...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTGACACAAGAGTCAAGTaGGAAGGCCATGGGTTCCGA +
Preference number: 5 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPDTRVK*EGHGFR
Trigger: TCGGAACCCATGGCCTTCCAACTTGACTCTTGTGTC...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAGCATCTGCCGTCACATaGTTCTGCACACACCGTCCT +
Preference number: 5 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPASAVT*FCTHRP
Trigger: AGGACGGTGTGTGCAGAACAATGTGACGGCAGATGC...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATATCTTCTACTTCCATCTaGGAACTAGGGCAGGCACGC +
Preference number: 5 (lower is better)
Translates to: QLEADVVGSALGSSAHSISSTSI*ELGQAR
Trigger: GCGTGCCTGCCCTAGTTCCAAGATGGAAGTAGAAGA...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAGGTCTCGAGCCATCCTaGAAAACTCAGCAGCCAGTT +
Preference number: 5 (lower is better)
Translates to: QLEADVVGSALGSSAHSIGLEPS*KTQQPV
Trigger: AACTGGCTGCTGAGTTTTCAAGGATGGCTCGAGACC...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCTATTCGAGTCAATTCTaGCTCTGGAAGTATAGATGG +
Preference number: 5 (lower is better)
Translates to: MSPGQELGEAGACKSDRSYSSQF*LWKYRW
Trigger: CCATCTATACTTCCAGAGCAAGAATTGACTCGAATA...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCGGGCACAGACACTCCTaGTTCAGCAGCAAAACCTCC +
Preference number: 5 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCGHRHS*FSSKTS
Trigger: GGAGGTTTTGCTGCTGAACAAGGAGTGTCTGTGCCC...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACGGTGCTACTGTCCTCTaGGACATGGGGTGCCACTGG +
Preference number: 5 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNGATVL*DMGCHW
Trigger: CCAGTGGCACCCCATGTCCAAGAGGACAGTAGCACC...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTCATCGGGGGACTACTTaGAACCAGGGTGGTAGAAAG +
Preference number: 5 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPHRGTT*NQGGRK
Trigger: CTTTCTACCACCCTGGTTCAAAGTAGTCCCCCGATG...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS TCA 90 bp GAAATTTTGGAGGCTGGGAAGTCCAATATCAAGGTGTCAGCAAATTaGGTGTCTTGTGAGGACCCACTCCTTGAGGCCAGTGTCTTGCTA +
Preference number: 5 (lower is better)
Translates to: EILEAGKSNIKVSAN*VSCEDPLLEASVLL
Trigger: TAGCAAGACACTGGCCTCAAGGAGTGGGTCCTCACAAGACACTCAATTTGCTGACACCTTGATATTGGACTTCCCAGCCTCCAAAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484474.1
CDS GCA 90 bp GGTCAGAGAGAGAGCTCAGTTTATTCTCCGTTCCTGCACACAAAATaGAGCTTCCTTCAGAGCAGCAATGACCTTCCCTTGAAAGACACA +
Preference number: 5 (lower is better)
Translates to: GQRESSVYSPFLHTK*SFLQSSNDLPLKDT
Trigger: TGTGTCTTTCAAGGGAAGGTCATTGCTGCTCTGAAGGAAGCTGCATTTTGTGTGCAGGAACGGAGAATAAACTGAGCTCTCTCTCTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435846.1
CDS CCA 90 bp ACTCCTATTCGAGTCAATTCTTGCTCTGGAAGTATAGATGGGAGGTaGGATGTTGAAAGCCTGAGGGACCAAGTACTCCTCAGCATCCAT +
Preference number: 5 (lower is better)
Translates to: TPIRVNSCSGSIDGR*DVESLRDQVLLSIH
Trigger: ATGGATGCTGAGGAGTACTTGGTCCCTCAGGCTTTCAACATCCCACCTCCCATCTATACTTCCAGAGCAAGAATTGACTCGAATAGGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342788.9
CDS CCA 90 bp ACAGTGGCTCATTCACATACTCATCCTCGGCCTTGGGTGGACCATTaGATGCATTGTGATATTCGGGATTATCCAATGCTTGAAGGTCTC +
Preference number: 5 (lower is better)
Translates to: TVAHSHTHPRPWVDH*MHCDIRDYPMLEGL
Trigger: GAGACCTTCAAGCATTGGATAATCCCGAATATCACAATGCATCCAATGGTCCACCCAAGGCCGAGGATGAGTATGTGAATGAGCCACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CCA 90 bp GTTGAGGTACAGTGGCTCATTCACATACTCATCCTCGGCCTTGGGTaGACCATTGGATGCATTGTGATATTCGGGATTATCCAATGCTTG +
Preference number: 5 (lower is better)
Translates to: VEVQWLIHILILGLG*TIGCIVIFGIIQCL
Trigger: CAAGCATTGGATAATCCCGAATATCACAATGCATCCAATGGTCCACCCAAGGCCGAGGATGAGTATGTGAATGAGCCACTGTACCTCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CCA 90 bp GTTCCTATTCGAGTCAATTCTTGCTCTGGAAGTATAGATGGGAGGTaGGATGTTGAAAGCCTGAGGGACCAAGTACTCCTCAGCATCCAT +
Preference number: 5 (lower is better)
Translates to: VPIRVNSCSGSIDGR*DVESLRDQVLLSIH
Trigger: ATGGATGCTGAGGAGTACTTGGTCCCTCAGGCTTTCAACATCCCACCTCCCATCTATACTTCCAGAGCAAGAATTGACTCGAATAGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCATCTTCTACTTCCATCTaGGAACTAGGGCAGGCACGC +
Preference number: 5 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPSSTSI*ELGQAR
Trigger: GCGTGCCTGCCCTAGTTCCAAGATGGAAGTAGAAGA...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAGTGATGCCCTGTTGCTaGAGGATAAGCAAGGACAGG +
Preference number: 5 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPVMPCC*RISKDR
Trigger: CCTGTCCTTGCTTATCCTCAAGCAACAGGGCATCAC...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCCGCCGGCTTCATTTTTaGGAAGTCTCAGATCCCGTG +
Preference number: 5 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCRRLHF*EVSDPV
Trigger: CACGGGATCTGAGACTTCCAAAAAATGAAGCCGGCG...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000342788.9
ENST00000436443.5
CDS-3UTR CAA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACGGGACCGTTACACCCTaGGGTGCAGTTTGGATGGCA +
Preference number: 5 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNGTVTP*GAVWMA
Trigger: TGCCATCCAAACTGCACCCAAGGGTGTAACGGTCCC...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCAGAAATGAAGAAACATaGTGGTTCCTCCTATCTTTC +
Preference number: 5 (lower is better)
Translates to: MSPGQELGEAGACKSDRSRNEET*WFLLSF
Trigger: GAAAGATAGGAGGAACCACAATGTTTCTTCATTTCT...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCATTTATTTACAACTTTaGACCCAAGGACCTATCCCT +
Preference number: 5 (lower is better)
Translates to: MSPGQELGEAGACKSDRSIYLQL*TQGPIP
Trigger: AGGGATAGGTCCTTGGGTCAAAAGTTGTAAATAAAT...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTGCCCACAACAGCTTCTaGTTTCCAACTGCAGAGAGA +
Preference number: 5 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPAHNSF*FPTAER
Trigger: TCTCTCTGCAGTTGGAAACAAGAAGCTGTTGTGGGC...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp ATGTCACCTGGCCAGGAATTAGGTGAGGCAGGGGCCTGCAAAAGTGACAGATCCTCTCTATGCGGTAGTTaGATAGTTCACTTAAACAGT +
Preference number: 5 (lower is better)
Translates to: MSPGQELGEAGACKSDRSSLCGS*IVHLNS
Trigger: ACTGTTTAAGTGAACTATCAAACTACCGCATAGAGA...GGATCTGTCACTTTTGCAGGCCCCTGCCTCACCTAATTCCTGGCCAGGTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS TCA 90 bp AAGCCATCTGGACATTTTTCCACACAGTTTGGGCCATCTTTAAAATaGGAGCACTTTGTACAGTTGTCAGGACCCGGTCCATGGCATGTG +
Preference number: 5 (lower is better)
Translates to: KPSGHFSTQFGPSLK*EHFVQLSGPGPWHV
Trigger: CACATGCCATGGACCGGGTCCTGACAACTGTACAAAGTGCTCTCATTTTAAAGATGGCCCAAACTGTGTGGAAAAATGTCCAGATGGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS TCA 90 bp CCAGTAGTCAGGGTTGTCAAACGCTTTCTTGGCCTTCTCTGGCATTaGCAGTATGTTGTTCTTCAGGTACTCAGCTTTTCCCAAGGTGTT +
Preference number: 5 (lower is better)
Translates to: PVVRVVKRFLGLLWH*QYVVLQVLSFSQGV
Trigger: AACACCTTGGGAAAAGCTGAGTACCTGAAGAACAACATACTGTCAATGCCAGAGAAGGCCAAGAAAGCGTTTGACAACCCTGACTACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS TCA 90 bp TGCACACAAAATGCAGCTTCCTTCAGAGCAGCAATGACCTTCCCTTaGAAGACACAGATTAAGAAGATCTCACAGAGAGGGAACCAGGAG +
Preference number: 5 (lower is better)
Translates to: CTQNAASFRAAMTFP*KTQIKKISQRGNQE
Trigger: CTCCTGGTTCCCTCTCTGTGAGATCTTCTTAATCTGTGTCTTTCAAGGGAAGGTCATTGCTGCTCTGAAGGAAGCTGCATTTTGTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435846.1
CDS GCA 90 bp TGGCTCATTCACATACTCATCCTCGGCCTTGGGTGGACCATTGGATaGATTGTGATATTCGGGATTATCCAATGCTTGAAGGTCTCCATT +
Preference number: 5 (lower is better)
Translates to: WLIHILILGLGWTIG*IVIFGIIQCLKVSI
Trigger: AATGGAGACCTTCAAGCATTGGATAATCCCGAATATCACAATGCATCCAATGGTCCACCCAAGGCCGAGGATGAGTATGTGAATGAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCTCTTCTACTTCCATCTaGGAACTAGGGCAGGCACGC +
Preference number: 5 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFSSTSI*ELGQAR
Trigger: GCGTGCCTGCCCTAGTTCCAAGATGGAAGTAGAAGA...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTGGTCTATGGCTTCAATaGCATTGTAAGGGTCCCCAT +
Preference number: 5 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPGLWLQ*HCKGPH
Trigger: ATGGGGACCCTTACAATGCAATTGAAGCCATAGACC...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCGTGATGCCCTGTTGCTaGAGGATAAGCAAGGACAGG +
Preference number: 5 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFVMPCC*RISKDR
Trigger: CCTGTCCTTGCTTATCCTCAAGCAACAGGGCATCAC...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATGCGACACGACAGACATaGGTCTGGCCCAGGTCCCCA +
Preference number: 5 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYATRQT*VWPRSP
Trigger: TGGGGACCTGGGCCAGACCAATGTCTGTCGTGTCGC...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAGATCCAATGTTATCCTaGTGCTCGTGGACATACTCC +
Preference number: 5 (lower is better)
Translates to: QLEADVVGSALGSSAHSIDPMLS*CSWTYS
Trigger: GGAGTATGTCCACGAGCACAAGGATAACATTGGATC...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAATACTCATCCTCGGCCTaGGGTGGACCATTGGATGCA +
Preference number: 5 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQYSSSA*GGPLDA
Trigger: TGCATCCAATGGTCCACCCAAGGCCGAGGATGAGTA...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAGTGTTGGCAAAGGTGTaGAGGTACAGTGGCTCATTC +
Preference number: 5 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPVLAKV*RYSGSF
Trigger: GAATGAGCCACTGTACCTCAACACCTTTGCCAACAC...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCGCTTTTCCCAAGGTGTaGGCAAAGGTGTTGAGGTAC +
Preference number: 5 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCAFPKV*AKVLRY
Trigger: GTACCTCAACACCTTTGCCAACACCTTGGGAAAAGC...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTGTTGGCCATTCTTACTaGCTAGGACAGAAACTGCTG +
Preference number: 5 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPVGHSY*LGQKLL
Trigger: CAGCAGTTTCTGTCCTAGCAAGTAAGAATGGCCAAC...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAATGTCTCCAATATTCTaGGCCAAGGACCACCATCTG +
Preference number: 5 (lower is better)
Translates to: QLEADVVGSALGSSAHSIMSPIF*AKDHHL
Trigger: CAGATGGTGGTCCTTGGCCAAGAATATTGGAGACAT...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTATGTCTCCAATATTCTaGGCCAAGGACCACCATCTG +
Preference number: 5 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPMSPIF*AKDHHL
Trigger: CAGATGGTGGTCCTTGGCCAAGAATATTGGAGACAT...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAGCCAAAAGAGGATCCTaGAGAACTAACGGAAAAGCC +
Preference number: 5 (lower is better)
Translates to: QLEADVVGSALGSSAHSIAKRGS*RTNGKA
Trigger: GGCTTTTCCGTTAGTTCTCAAGGATCCTCTTTTGGC...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS TCA 90 bp TGGTTTGGAGATTTCACTAAGACATTACGGGCTGCCAAATCCCGATaGACGAGTCGTCTTTCTTCCAGGTACATCATTCCCTTAGCTATC +
Preference number: 5 (lower is better)
Translates to: WFGDFTKTLRAAKSR*TSRLSSRYIIPLAI
Trigger: GATAGCTAAGGGAATGATGTACCTGGAAGAAAGACGACTCGTTCATCGGGATTTGGCAGCCCGTAATGTCTTAGTGAAATCTCCAAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CCA 90 bp GAAACCTGTTATCTCTCTGACTGTCCGAAAGACGTTCAGTTTCTCTaGGTCTATGGCTTCAATTGCATTGTAAGGGTCCCCATGAATACC +
Preference number: 5 (lower is better)
Translates to: ETCYLSDCPKDVQFL*VYGFNCIVRVPMNT
Trigger: GGTATTCATGGGGACCCTTACAATGCAATTGAAGCCATAGACCCAGAGAAACTGAACGTCTTTCGGACAGTCAGAGAGATAACAGGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS-3UTR CAA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACCTGGTTATCTCCAGGTaGCCCATGACAACCTCACAG +
Preference number: 5 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNLVISR*PMTTSQ
Trigger: CTGTGAGGTTGTCATGGGCAACCTGGAGATAACCAG...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAACTGGTTATCTCCAGGTaGCCCATGACAACCTCACAG +
Preference number: 5 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQLVISR*PMTTSQ
Trigger: CTGTGAGGTTGTCATGGGCAACCTGGAGATAACCAG...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACGACACAAGAGTCAAGTaGGAAGGCCATGGGTTCCGA +
Preference number: 5 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNDTRVK*EGHGFR
Trigger: TCGGAACCCATGGCCTTCCAACTTGACTCTTGTGTC...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTCATGCTCCACTGTCATaGAAATTCATGCAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPHAPLS*KFMQAK
Trigger: CTTTGCCTGCATGAATTTCAATGACAGTGGAGCATG...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCTGCCATCACAAGCTTTaGGGCAAATGTCAGTGCAAG +
Preference number: 5 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCCHHKL*GKCQCK
Trigger: CTTGCACTGACATTTGCCCAAAAGCTTGTGATGGCA...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAAATACGAAGTTGAGCTaGATTGGGTGCTGTGCCACT +
Preference number: 5 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPNTKLS*IGCCAT
Trigger: AGTGGCACAGCACCCAATCAAGCTCAACTTCGTATT...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCACAGGGATTTCTCGCGTaGGAATTCCATCATAGGGTT +
Preference number: 5 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPQGFLA*EFHHRV
Trigger: AACCCTATGATGGAATTCCAACGCGAGAAATCCCTG...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAAGAACTTGCTGTCATTaGGACTGGGAAGCTTCATAC +
Preference number: 5 (lower is better)
Translates to: QLEADVVGSALGSSAHSIRTCCH*DWEASY
Trigger: GTATGAAGCTTCCCAGTCCAAATGACAGCAAGTTCT...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATATGGCCTTCTCTGGCATaGACAGTATGTTGTTCTTCA +
Preference number: 5 (lower is better)
Translates to: QLEADVVGSALGSSAHSIWPSLA*TVCCSS
Trigger: TGAAGAACAACATACTGTCAATGCCAGAGAAGGCCA...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCATTGTCAAACGCTTTCTaGGCCTTCTCTGGCATTGAC +
Preference number: 5 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPLSNAF*AFSGID
Trigger: GTCAATGCCAGAGAAGGCCAAGAAAGCGTTTGACAA...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTACCAGCAAGGTATTTTaGCACCCCAATCCTTTGAAG +
Preference number: 5 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPTSKVF*HPNPLK
Trigger: CTTCAAAGGATTGGGGTGCAAAAATACCTTGCTGGT...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAAATTGGCATATCCTATaGTGTAAGCGAGTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: QLEADVVGSALGSSAHSINWHIL*CKRVQR
Trigger: CCTCTGCACTCGCTTACACAATAGGATATGCCAATT...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CCA 90 bp AACGTCCACATCCTGAACTACCATTTGTTGACACAAGAGTCAAGTTaGAAGGCCATGGGTTCCGAACAATATCTTGCCAATGAATGGTGT +
Preference number: 5 (lower is better)
Translates to: NVHILNYHLLTQESS*KAMGSEQYLANEWC
Trigger: ACACCATTCATTGGCAAGATATTGTTCGGAACCCATGGCCTTCCAACTTGACTCTTGTGTCAACAAATGGTAGTTCAGGATGTGGACGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484474.1
ENST00000484594.5
CDS-3UTR CAA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAGTTCCGAACAATATCTaGCCAATGAATGGTGTCTGC +
Preference number: 5 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPVPNNI*PMNGVC
Trigger: GCAGACACCATTCATTGGCAAGATATTGTTCGGAAC...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTCTGAACTACCATTTGTaGACACAAGAGTCAAGTTGG +
Preference number: 5 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPLNYHL*TQESSW
Trigger: CCAACTTGACTCTTGTGTCAACAAATGGTAGTTCAG...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTATTGTAGACAAAGGTTaGGGGACACTGAGTAACACA +
Preference number: 5 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPIVDKG*GTLSNT
Trigger: TGTGTTACTCAGTGTCCCCAAACCTTTGTCTACAAT...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAGGGACCGTTACACCCTaGGGTGCAGTTTGGATGGCA +
Preference number: 5 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAGTVTP*GAVWMA
Trigger: TGCCATCCAAACTGCACCCAAGGGTGTAACGGTCCC...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAAACTCCACATTTGCCTaGGGACCAGTTGTCTCATTA +
Preference number: 5 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPNSTFA*GPVVSL
Trigger: TAATGAGACAACTGGTCCCAAGGCAAATGTGGAGTT...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCGATCCAATGTTATCCTaGTGCTCGTGGACATACTCC +
Preference number: 5 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFDPMLS*CSWTYS
Trigger: GGAGTATGTCCACGAGCACAAGGATAACATTGGATC...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCCAGGGATTTCTCGCGTaGGAATTCCATCATAGGGTT +
Preference number: 5 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLQGFLA*EFHHRV
Trigger: AACCCTATGATGGAATTCCAACGCGAGAAATCCCTG...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCAGAACTTGCTGTCATTaGGACTGGGAAGCTTCATAC +
Preference number: 5 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCRTCCH*DWEASY
Trigger: GTATGAAGCTTCCCAGTCCAAATGACAGCAAGTTCT...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATATTCAGGTATTCTTGTTaGGGTTTGTCTCGCATAGGA +
Preference number: 5 (lower is better)
Translates to: QLEADVVGSALGSSAHSIFRYSC*GLSRIG
Trigger: TCCTATGCGAGACAAACCCAAACAAGAATACCTGAA...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACGTGTTGGCAAAGGTGTaGAGGTACAGTGGCTCATTC +
Preference number: 5 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNVLAKV*RYSGSF
Trigger: GAATGAGCCACTGTACCTCAACACCTTTGCCAACAC...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACGCTTTTCCCAAGGTGTaGGCAAAGGTGTTGAGGTAC +
Preference number: 5 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNAFPKV*AKVLRY
Trigger: GTACCTCAACACCTTTGCCAACACCTTGGGAAAAGC...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCATGGCCTTCTCTGGCATaGACAGTATGTTGTTCTTCA +
Preference number: 5 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPWPSLA*TVCCSS
Trigger: TGAAGAACAACATACTGTCAATGCCAGAGAAGGCCA...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATATGCAAGGTTCCTAATTaGCTTGGTTTGGCATTTCCA +
Preference number: 5 (lower is better)
Translates to: QLEADVVGSALGSSAHSICKVPN*LGLAFP
Trigger: TGGAAATGCCAAACCAAGCAAATTAGGAACCTTGCA...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACGCCCACAACAGCTTCTaGTTTCCAACTGCAGAGAGA +
Preference number: 5 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNAHNSF*FPTAER
Trigger: TCTCTCTGCAGTTGGAAACAAGAAGCTGTTGTGGGC...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATACACAAGAGAGAGGGCTaGTTTTCTGCTTACAAGTTA +
Preference number: 5 (lower is better)
Translates to: QLEADVVGSALGSSAHSIHKREG*FSAYKL
Trigger: TAACTTGTAAGCAGAAAACAAGCCCTCTCTCTTGTG...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCGCCAAAAGAGGATCCTaGAGAACTAACGGAAAAGCC +
Preference number: 5 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFAKRGS*RTNGKA
Trigger: GGCTTTTCCGTTAGTTCTCAAGGATCCTCTTTTGGC...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS GCA 90 bp GGAAGGCCATGGGTTCCGAACAATATCTTGCCAATGAATGGTGTCTaGATAACAAAGGAATTTGTTCTGGTCTACATAGACTCCACCATT +
Preference number: 5 (lower is better)
Translates to: GRPWVPNNILPMNGV*ITKEFVLVYIDSTI
Trigger: AATGGTGGAGTCTATGTAGACCAGAACAAATTCCTTTGTTATGCAGACACCATTCATTGGCAAGATATTGTTCGGAACCCATGGCCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000435846.1
ENST00000436443.5
ENST00000484474.1
ENST00000484594.5
CDS-3UTR CAA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCCATGCTCCACTGTCATaGAAATTCATGCAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFHAPLS*KFMQAK
Trigger: CTTTGCCTGCATGAATTTCAATGACAGTGGAGCATG...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAGAAATTGTGCTCCAGTaGAAAGGTGGTTGGATTGTA +
Preference number: 5 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPEIVLQ*KGGWIV
Trigger: TACAATCCAACCACCTTTCAACTGGAGCACAATTTC...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCGAAATTGTGCTCCAGTaGAAAGGTGGTTGGATTGTA +
Preference number: 5 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCEIVLQ*KGGWIV
Trigger: TACAATCCAACCACCTTTCAACTGGAGCACAATTTC...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACTGCCATCACAAGCTTTaGGGCAAATGTCAGTGCAAG +
Preference number: 5 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNCHHKL*GKCQCK
Trigger: CTTGCACTGACATTTGCCCAAAAGCTTGTGATGGCA...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAAATACGAAGTTGAGCTaGATTGGGTGCTGTGCCACT +
Preference number: 5 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQNTKLS*IGCCAT
Trigger: AGTGGCACAGCACCCAATCAAGCTCAACTTCGTATT...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCAACTCCACATTTGCCTaGGGACCAGTTGTCTCATTA +
Preference number: 5 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFNSTFA*GPVVSL
Trigger: TAATGAGACAACTGGTCCCAAGGCAAATGTGGAGTT...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAGGGCACAGACACTCCTaGTTCAGCAGCAAAACCTCC +
Preference number: 5 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAGHRHS*FSSKTS
Trigger: GGAGGTTTTGCTGCTGAACAAGGAGTGTCTGTGCCC...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCTTCAGGTATTCTTGTTaGGGTTTGTCTCGCATAGGA +
Preference number: 5 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCFRYSC*GLSRIG
Trigger: TCCTATGCGAGACAAACCCAAACAAGAATACCTGAA...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCATACTCATCCTCGGCCTaGGGTGGACCATTGGATGCA +
Preference number: 5 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAYSSSA*GGPLDA
Trigger: TGCATCCAATGGTCCACCCAAGGCCGAGGATGAGTA...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCGGCATTGACAGTATGTaGTTCTTCAGGTACTCAGCT +
Preference number: 5 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFGIDSM*FFRYSA
Trigger: AGCTGAGTACCTGAAGAACAACATACTGTCAATGCC...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCGGCATTGACAGTATGTaGTTCTTCAGGTACTCAGCT +
Preference number: 5 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLGIDSM*FFRYSA
Trigger: AGCTGAGTACCTGAAGAACAACATACTGTCAATGCC...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCTGGCCTTCTCTGGCATaGACAGTATGTTGTTCTTCA +
Preference number: 5 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLWPSLA*TVCCSS
Trigger: TGAAGAACAACATACTGTCAATGCCAGAGAAGGCCA...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACTTGTCAAACGCTTTCTaGGCCTTCTCTGGCATTGAC +
Preference number: 5 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNLSNAF*AFSGID
Trigger: GTCAATGCCAGAGAAGGCCAAGAAAGCGTTTGACAA...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACGTTGGCCATTCTTACTaGCTAGGACAGAAACTGCTG +
Preference number: 5 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNVGHSY*LGQKLL
Trigger: CAGCAGTTTCTGTCCTAGCAAGTAAGAATGGCCAAC...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAACTGAACAAATTTCCTaGCGTAGCAAAGGTGACATA +
Preference number: 5 (lower is better)
Translates to: QLEADVVGSALGSSAHSITEQIS*RSKGDI
Trigger: TATGTCACCTTTGCTACGCAAGGAAATTTGTTCAGT...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAATGTCTCCAATATTCTaGGCCAAGGACCACCATCTG +
Preference number: 5 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQMSPIF*AKDHHL
Trigger: CAGATGGTGGTCCTTGGCCAAGAATATTGGAGACAT...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTTTCTGCAAATTTCAATaGCTACAATTGGCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPFCKFQ*LQLASG
Trigger: TCCAGAGGCCAATTGTAGCAATTGAAATTTGCAGAA...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATATTCTGCAAATTTCAATaGCTACAATTGGCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: QLEADVVGSALGSSAHSIFCKFQ*LQLASG
Trigger: TCCAGAGGCCAATTGTAGCAATTGAAATTTGCAGAA...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAACTGCTAAAAGATATTaGCCCACACAAACACAAGGG +
Preference number: 5 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPTAKRY*PTQTQG
Trigger: CCCTTGTGTTTGTGTGGGCAAATATCTTTTAGCAGT...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCTACAGGAGGTATGATTaGCTTTCCTTCACAAAGGCT +
Preference number: 5 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCYRRYD*LSFTKA
Trigger: AGCCTTTGTGAAGGAAAGCAAATCATACCTCCTGTA...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCATCCCAAAAGGGTTCTaGGAGTGCTATGGTTGTAGT +
Preference number: 5 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFIPKGF*ECYGCS
Trigger: ACTACAACCATAGCACTCCAAGAACCCTTTTGGGAT...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCATCCCAAAAGGGTTCTaGGAGTGCTATGGTTGTAGT +
Preference number: 5 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLIPKGF*ECYGCS
Trigger: ACTACAACCATAGCACTCCAAGAACCCTTTTGGGAT...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCACACAAGAGAGAGGGCTaGTTTTCTGCTTACAAGTTA +
Preference number: 5 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPHKREG*FSAYKL
Trigger: TAACTTGTAAGCAGAAAACAAGCCCTCTCTCTTGTG...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCATTGCACCCCAATCCTTaGAAGATACTTCACAAGAGA +
Preference number: 5 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPLHPNP*KILHKR
Trigger: TCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAA...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCTTGCACCCCAATCCTTaGAAGATACTTCACAAGAGA +
Preference number: 5 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCLHPNP*KILHKR
Trigger: TCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAA...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCACCAGCAAGGTATTTTaGCACCCCAATCCTTTGAAG +
Preference number: 5 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLTSKVF*HPNPLK
Trigger: CTTCAAAGGATTGGGGTGCAAAAATACCTTGCTGGT...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCAATTGGCATATCCTATaGTGTAAGCGAGTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLNWHIL*CKRVQR
Trigger: CCTCTGCACTCGCTTACACAATAGGATATGCCAATT...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACGCCAAAAGAGGATCCTaGAGAACTAACGGAAAAGCC +
Preference number: 5 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNAKRGS*RTNGKA
Trigger: GGCTTTTCCGTTAGTTCTCAAGGATCCTCTTTTGGC...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAACTAGAAGCTGATGTTGTAGGATCAGCTCTAGGATCCTCTGCCCACAGTATAAGAACAGTTTTCAAATaGTTCAGCTGGGATGATCAG +
Preference number: 5 (lower is better)
Translates to: QLEADVVGSALGSSAHSIRTVFK*FSWDDQ
Trigger: CTGATCATCCCAGCTGAACAATTTGAAAACTGTTCT...TATACTGTGGGCAGAGGATCCTAGAGCTGATCCTACAACATCAGCTTCTAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CCA 90 bp TCAAGTTGGAAGGCCATGGGTTCCGAACAATATCTTGCCAATGAATaGTGTCTGCATAACAAAGGAATTTGTTCTGGTCTACATAGACTC +
Preference number: 5 (lower is better)
Translates to: SSWKAMGSEQYLANE*CLHNKGICSGLHRL
Trigger: GAGTCTATGTAGACCAGAACAAATTCCTTTGTTATGCAGACACCATTCATTGGCAAGATATTGTTCGGAACCCATGGCCTTCCAACTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000435846.1
ENST00000436443.5
ENST00000484474.1
ENST00000484594.5
CDS-3UTR CAA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAAAGGAGAGGTCCCGGTaGTGCTCAATGCTGGTTATC +
Preference number: 5 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAKERSR*CSMLVI
Trigger: GATAACCAGCATTGAGCACAACCGGGACCTCTCCTT...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAGTTCCGAACAATATCTaGCCAATGAATGGTGTCTGC +
Preference number: 5 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQVPNNI*PMNGVC
Trigger: GCAGACACCATTCATTGGCAAGATATTGTTCGGAAC...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATGACACAAGAGTCAAGTaGGAAGGCCATGGGTTCCGA +
Preference number: 5 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYDTRVK*EGHGFR
Trigger: TCGGAACCCATGGCCTTCCAACTTGACTCTTGTGTC...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCCTGAACTACCATTTGTaGACACAAGAGTCAAGTTGG +
Preference number: 5 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLLNYHL*TQESSW
Trigger: CCAACTTGACTCTTGTGTCAACAAATGGTAGTTCAG...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCATCCTGAACTACCATTaGTTGACACAAGAGTCAAGT +
Preference number: 5 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCILNYH*LTQESS
Trigger: ACTTGACTCTTGTGTCAACAAATGGTAGTTCAGGAT...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCATTGTAGACAAAGGTTaGGGGACACTGAGTAACACA +
Preference number: 5 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFIVDKG*GTLSNT
Trigger: TGTGTTACTCAGTGTCCCCAAACCTTTGTCTACAAT...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCATTGTAGACAAAGGTTaGGGGACACTGAGTAACACA +
Preference number: 5 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLIVDKG*GTLSNT
Trigger: TGTGTTACTCAGTGTCCCCAAACCTTTGTCTACAAT...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCATTTTCAGCTTTTCTGTaGTCCCGGATTACTATTCTC +
Preference number: 5 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPFSAFL*SRITIL
Trigger: GAGAATAGTAATCCGGGACAACAGAAAAGCTGAAAA...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAGGTCTCGAGCCATCCTaGAAAACTCAGCAGCCAGTT +
Preference number: 5 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAGLEPS*KTQQPV
Trigger: AACTGGCTGCTGAGTTTTCAAGGATGGCTCGAGACC...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACAGAACTTGCTGTCATTaGGACTGGGAAGCTTCATAC +
Preference number: 5 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNRTCCH*DWEASY
Trigger: GTATGAAGCTTCCCAGTCCAAATGACAGCAAGTTCT...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCTGGATTCAGGTATTCTaGTTTGGGTTTGTCTCGCAT +
Preference number: 5 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFWIQVF*FGFVSH
Trigger: ATGCGAGACAAACCCAAACAAGAATACCTGAATCCA...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAGGCATTGACAGTATGTaGTTCTTCAGGTACTCAGCT +
Preference number: 5 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQGIDSM*FFRYSA
Trigger: AGCTGAGTACCTGAAGAACAACATACTGTCAATGCC...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTCTGGTTGCTTCCATATaGCTTGATTCAAAATCCAAA +
Preference number: 5 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPLVASI*LDSKSK
Trigger: TTTGGATTTTGAATCAAGCAATATGGAAGCAACCAG...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCACATCGGGGGACTACTTaGAACCAGGGTGGTAGAAAG +
Preference number: 5 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAHRGTT*NQGGRK
Trigger: CTTTCTACCACCCTGGTTCAAAGTAGTCCCCCGATG...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp AGAAGGAATCTCACAAACCCTTCTCCTGCTCTACCATACTTTTTCAGCTCGCCTTCTCTATGCGGTAGTTaGATAGTTCACTTAAACAGT +
Preference number: 5 (lower is better)
Translates to: RRNLTNPSPALPYFFSSPSLCGS*IVHLNS
Trigger: ACTGTTTAAGTGAACTATCAAACTACCGCATAGAGA...AGGCGAGCTGAAAAAGTATGGTAGAGCAGGAGAAGGGTTTGTGAGATTCCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCCACAAGAGAGAGGGCTaGTTTTCTGCTTACAAGTTA +
Preference number: 5 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLHKREG*FSAYKL
Trigger: TAACTTGTAAGCAGAAAACAAGCCCTCTCTCTTGTG...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAACCAGCAAGGTATTTTaGCACCCCAATCCTTTGAAG +
Preference number: 5 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQTSKVF*HPNPLK
Trigger: CTTCAAAGGATTGGGGTGCAAAAATACCTTGCTGGT...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAAATTGGCATATCCTATaGTGTAAGCGAGTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQNWHIL*CKRVQR
Trigger: CCTCTGCACTCGCTTACACAATAGGATATGCCAATT...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAAGAACAGTTTTCAAATaGTTCAGCTGGGATGATCAG +
Preference number: 5 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPRTVFK*FSWDDQ
Trigger: CTGATCATCCCAGCTGAACAATTTGAAAACTGTTCT...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS GCA 90 bp TCATATCTTCCAAATCCTCTTCATCCAAGAGATTCTGAAAGAACTTaGTGTCATTTGGACTGGGAAGCTTCATACGATCATCACCCTGAA +
Preference number: 5 (lower is better)
Translates to: SYLPNPLHPRDSERT*CHLDWEASYDHHPE
Trigger: TTCAGGGTGATGATCGTATGAAGCTTCCCAGTCCAAATGACAGCAAGTTCTTTCAGAATCTCTTGGATGAAGAGGATTTGGAAGATATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACCTGAACTACCATTTGTaGACACAAGAGTCAAGTTGG +
Preference number: 5 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNLNYHL*TQESSW
Trigger: CCAACTTGACTCTTGTGTCAACAAATGGTAGTTCAG...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCATCCTGAACTACCATTaGTTGACACAAGAGTCAAGT +
Preference number: 5 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFILNYH*LTQESS
Trigger: ACTTGACTCTTGTGTCAACAAATGGTAGTTCAGGAT...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAGAAATTGTGCTCCAGTaGAAAGGTGGTTGGATTGTA +
Preference number: 5 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQEIVLQ*KGGWIV
Trigger: TACAATCCAACCACCTTTCAACTGGAGCACAATTTC...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAATTACTATTCTCTGGTaGATTGTGCTGAAGAGTGTT +
Preference number: 5 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPITILW*IVLKSV
Trigger: AACACTCTTCAGCACAATCAACCAGAGAATAGTAAT...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCTTTTCAGCTTTTCTGTaGTCCCGGATTACTATTCTC +
Preference number: 5 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFFSAFL*SRITIL
Trigger: GAGAATAGTAATCCGGGACAACAGAAAAGCTGAAAA...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATCTGGAACACAGATGGTaGCACACCATTCCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYLEHRW*HTIPSA
Trigger: TGCTGAAGGAATGGTGTGCAACCATCTGTGTTCCAG...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCTTTCCTCCATCAGCATaGTACTCTTTTTCATCTCCT +
Preference number: 5 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFFPPSA*YSFSSP
Trigger: AGGAGATGAAAAAGAGTACAATGCTGATGGAGGAAA...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAATATTCTTGTTTGGGTTaGTCTCGCATAGGAGTCATG +
Preference number: 5 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQYSCLG*SRIGVM
Trigger: CATGACTCCTATGCGAGACAAACCCAAACAAGAATA...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACTTCAGGTATTCTTGTTaGGGTTTGTCTCGCATAGGA +
Preference number: 5 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNFRYSC*GLSRIG
Trigger: TCCTATGCGAGACAAACCCAAACAAGAATACCTGAA...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATGTGTTGGCAAAGGTGTaGAGGTACAGTGGCTCATTC +
Preference number: 5 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYVLAKV*RYSGSF
Trigger: GAATGAGCCACTGTACCTCAACACCTTTGCCAACAC...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TTTGCACCCCAATCCTTTGAAGATACTTCACAAGAGAGAGGGCTTGTTTTCTGCAGAAATGAAGAAACATaGTGGTTCCTCCTATCTTTC +
Preference number: 5 (lower is better)
Translates to: FAPQSFEDTSQERGLVFCRNEET*WFLLSF
Trigger: GAAAGATAGGAGGAACCACAATGTTTCTTCATTTCT...GCAGAAAACAAGCCCTCTCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACAGGTTCCTAATTTGCTaGGTTTGGCATTTCCACAGT +
Preference number: 5 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNRFLIC*VWHFHS
Trigger: ACTGTGGAAATGCCAAACCAAGCAAATTAGGAACCT...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACTGCAAGGTTCCTAATTaGCTTGGTTTGGCATTTCCA +
Preference number: 5 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNCKVPN*LGLAFP
Trigger: TGGAAATGCCAAACCAAGCAAATTAGGAACCTTGCA...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCACTCATCTCTGTCATTaGTTCTCATCCTTCATCTCA +
Preference number: 5 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLTHLCH*FSSFIS
Trigger: TGAGATGAAGGATGAGAACAAATGACAGAGATGAGT...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATGCCCACAACAGCTTCTaGTTTCCAACTGCAGAGAGA +
Preference number: 5 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYAHNSF*FPTAER
Trigger: TCTCTCTGCAGTTGGAAACAAGAAGCTGTTGTGGGC...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAACTGCTAAAAGATATTaGCCCACACAAACACAAGGG +
Preference number: 5 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQTAKRY*PTQTQG
Trigger: CCCTTGTGTTTGTGTGGGCAAATATCTTTTAGCAGT...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAACAGATCCTACATTTTaGGACCTCTACAAAATCAGT +
Preference number: 5 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPTDPTF*DLYKIS
Trigger: ACTGATTTTGTAGAGGTCCAAAAATGTAGGATCTGT...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCGGACAAGTTAGACTATaGCCTACAGGTATGAATCTT +
Preference number: 5 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFGQVRL*PTGMNL
Trigger: AAGATTCATACCTGTAGGCAATAGTCTAACTTGTCC...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TATATGTTTACATGGGGCAAGGCTGTCCTTCAAACTGATACACACCGAAGTCCAGGAAATATCTACGCATaGGGGATAAAAATAGCAGTA +
Preference number: 5 (lower is better)
Translates to: YMFTWGKAVLQTDTHRSPGNIYA*GIKIAV
Trigger: TACTGCTATTTTTATCCCCAATGCGTAGATATTTCC...TGGACTTCGGTGTGTATCAGTTTGAAGGACAGCCTTGCCCCATGTAAACATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAATACAGGAGGTATGATTaGCTTTCCTTCACAAAGGCT +
Preference number: 5 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQYRRYD*LSFTKA
Trigger: AGCCTTTGTGAAGGAAAGCAAATCATACCTCCTGTA...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAATTGCACCCCAATCCTTaGAAGATACTTCACAAGAGA +
Preference number: 5 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQLHPNP*KILHKR
Trigger: TCTCTTGTGAAGTATCTTCAAAGGATTGGGGTGCAA...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAATCCTGAACTACCATTaGTTGACACAAGAGTCAAGT +
Preference number: 5 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQILNYH*LTQESS
Trigger: ACTTGACTCTTGTGTCAACAAATGGTAGTTCAGGAT...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCTTATGTGGACATTTCTaGACACAGAATGCTCCATAT +
Preference number: 5 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFLCGHF*TQNAPY
Trigger: ATATGGAGCATTCTGTGTCAAGAAATGTCCACATAA...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCATGCCATCACAAGCTTTaGGGCAAATGTCAGTGCAAG +
Preference number: 5 (lower is better)
Translates to: FQSFPLMFKLGKHITIIACHHKL*GKCQCK
Trigger: CTTGCACTGACATTTGCCCAAAAGCTTGTGATGGCA...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAGGTCTATGGCTTCAATaGCATTGTAAGGGTCCCCAT +
Preference number: 5 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAGLWLQ*HCKGPH
Trigger: ATGGGGACCCTTACAATGCAATTGAAGCCATAGACC...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATGATCCAATGTTATCCTaGTGCTCGTGGACATACTCC +
Preference number: 5 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYDPMLS*CSWTYS
Trigger: GGAGTATGTCCACGAGCACAAGGATAACATTGGATC...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAATTTCCTCCATCAGCATaGTACTCTTTTTCATCTCCT +
Preference number: 5 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQFPPSA*YSFSSP
Trigger: AGGAGATGAAAAAGAGTACAATGCTGATGGAGGAAA...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAATATTCGAGTCAATTCTaGCTCTGGAAGTATAGATGG +
Preference number: 5 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQYSSQF*LWKYRW
Trigger: CCATCTATACTTCCAGAGCAAGAATTGACTCGAATA...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GATAGTAGGCAGCATTGCCTTACATTTTCTGGTCCTTCTCTAGCTGTTTCATTCAGAAATGAAGAAACATaGTGGTTCCTCCTATCTTTC +
Preference number: 5 (lower is better)
Translates to: DSRQHCLTFSGPSLAVSFRNEET*WFLLSF
Trigger: GAAAGATAGGAGGAACCACAATGTTTCTTCATTTCT...GAATGAAACAGCTAGAGAAGGACCAGAAAATGTAAGGCAATGCTGCCTACTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAACCTAATTTGCTTGGTTaGGCATTTCCACAGTCTTTA +
Preference number: 5 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQPNLLG*AFPQSL
Trigger: TAAAGACTGTGGAAATGCCAAACCAAGCAAATTAGG...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACACTGAACAAATTTCCTaGCGTAGCAAAGGTGACATA +
Preference number: 5 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNTEQIS*RSKGDI
Trigger: TATGTCACCTTTGCTACGCAAGGAAATTTGTTCAGT...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAACTCATCTCTGTCATTaGTTCTCATCCTTCATCTCA +
Preference number: 5 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQTHLCH*FSSFIS
Trigger: TGAGATGAAGGATGAGAACAAATGACAGAGATGAGT...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCAGCATTTGGGTCATTTaGGATTATTCCTACATGCAT +
Preference number: 5 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLSIWVI*DYSYMH
Trigger: ATGCATGTAGGAATAATCCAAAATGACCCAAATGCT...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACTTCTGCAAATTTCAATaGCTACAATTGGCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNFCKFQ*LQLASG
Trigger: TCCAGAGGCCAATTGTAGCAATTGAAATTTGCAGAA...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACGGACAAGTTAGACTATaGCCTACAGGTATGAATCTT +
Preference number: 5 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNGQVRL*PTGMNL
Trigger: AAGATTCATACCTGTAGGCAATAGTCTAACTTGTCC...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TCTGTGTCTTTACCCCTGAAAAGTTTGAGGGTGAACTTCACTAGAAGGAATCTCGGAAATATCTACGCATaGGGGATAAAAATAGCAGTA +
Preference number: 5 (lower is better)
Translates to: SVSLPLKSLRVNFTRRNLGNIYA*GIKIAV
Trigger: TACTGCTATTTTTATCCCCAATGCGTAGATATTTCC...GAGATTCCTTCTAGTGAAGTTCACCCTCAAACTTTTCAGGGGTAAAGACACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CAAGTTTTCCCAAGTGGAACCATATATGCCTACTTTCAGCTAAACCCAACAAACAGAACAGTTTTCAAATaGTTCAGCTGGGATGATCAG +
Preference number: 5 (lower is better)
Translates to: QVFPSGTIYAYFQLNPTNRTVFK*FSWDDQ
Trigger: CTGATCATCCCAGCTGAACAATTTGAAAACTGTTCT...GTTTGTTGGGTTTAGCTGAAAGTAGGCATATATGGTTCCACTTGGGAAAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCACATGCTCCACTGTCATaGAAATTCATGCAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAHAPLS*KFMQAK
Trigger: CTTTGCCTGCATGAATTTCAATGACAGTGGAGCATG...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAATTATGTGGACATTTCTaGACACAGAATGCTCCATAT +
Preference number: 5 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQLCGHF*TQNAPY
Trigger: ATATGGAGCATTCTGTGTCAAGAAATGTCCACATAA...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAACTGGTTGCTTCCATATaGCTTGATTCAAAATCCAAA +
Preference number: 5 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQLVASI*LDSKSK
Trigger: TTTGGATTTTGAATCAAGCAATATGGAAGCAACCAG...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp GTATGGAATGAGGCAAAGCAGTTCGCATTCTATAATTGCCTTGTACAGGTACAAACAGATCCTACATTTTaGGACCTCTACAAAATCAGT +
Preference number: 5 (lower is better)
Translates to: VWNEAKQFAFYNCLVQVQTDPTF*DLYKIS
Trigger: ACTGATTTTGTAGAGGTCCAAAAATGTAGGATCTGT...TTGTACCTGTACAAGGCAATTATAGAATGCGAACTGCTTTGCCTCATTCCATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCATATTCTTGTTTGGGTTaGTCTCGCATAGGAGTCATG +
Preference number: 5 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAYSCLG*SRIGVM
Trigger: CATGACTCCTATGCGAGACAAACCCAAACAAGAATA...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCATGGATTCAGGTATTCTaGTTTGGGTTTGTCTCGCAT +
Preference number: 5 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAWIQVF*FGFVSH
Trigger: ATGCGAGACAAACCCAAACAAGAATACCTGAATCCA...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATTGGATTCAGGTATTCTaGTTTGGGTTTGTCTCGCAT +
Preference number: 5 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYWIQVF*FGFVSH
Trigger: ATGCGAGACAAACCCAAACAAGAATACCTGAATCCA...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAAGGTTCCTAATTTGCTaGGTTTGGCATTTCCACAGT +
Preference number: 5 (lower is better)
Translates to: FQSFPLMFKLGKHITIIARFLIC*VWHFHS
Trigger: ACTGTGGAAATGCCAAACCAAGCAAATTAGGAACCT...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCATACAGGAGGTATGATTaGCTTTCCTTCACAAAGGCT +
Preference number: 5 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAYRRYD*LSFTKA
Trigger: AGCCTTTGTGAAGGAAAGCAAATCATACCTCCTGTA...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCATATTCGAGTCAATTCTaGCTCTGGAAGTATAGATGG +
Preference number: 5 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAYSSQF*LWKYRW
Trigger: CCATCTATACTTCCAGAGCAAGAATTGACTCGAATA...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATACTGAACAAATTTCCTaGCGTAGCAAAGGTGACATA +
Preference number: 5 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYTEQIS*RSKGDI
Trigger: TATGTCACCTTTGCTACGCAAGGAAATTTGTTCAGT...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCATTATGTGGACATTTCTaGACACAGAATGCTCCATAT +
Preference number: 5 (lower is better)
Translates to: FQSFPLMFKLGKHITIIALCGHF*TQNAPY
Trigger: ATATGGAGCATTCTGTGTCAAGAAATGTCCACATAA...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATATTACTATTCTCTGGTaGATTGTGCTGAAGAGTGTT +
Preference number: 5 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYITILW*IVLKSV
Trigger: AACACTCTTCAGCACAATCAACCAGAGAATAGTAAT...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATCTGGTTGCTTCCATATaGCTTGATTCAAAATCCAAA +
Preference number: 5 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYLVASI*LDSKSK
Trigger: TTTGGATTTTGAATCAAGCAATATGGAAGCAACCAG...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAATTTATTTACAACTTTaGACCCAAGGACCTATCCCT +
Preference number: 5 (lower is better)
Translates to: FQSFPLMFKLGKHITIIAIYLQL*TQGPIP
Trigger: AGGGATAGGTCCTTGGGTCAAAAGTTGTAAATAAAT...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp TTTCAGTCTTTCCCTCTAATGTTCAAGTTAGGTAAGCACATAACTATCATTGCAAGCATTTGGGTCATTTaGGATTATTCCTACATGCAT +
Preference number: 5 (lower is better)
Translates to: FQSFPLMFKLGKHITIIASIWVI*DYSYMH
Trigger: ATGCATGTAGGAATAATCCAAAATGACCCAAATGCT...TGCAATGATAGTTATGTGCTTACCTAACTTGAACATTAGAGGGAAAGACTGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATACAGATCCTACATTTTaGGACCTCTACAAAATCAGT +
Preference number: 5 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYTDPTF*DLYKIS
Trigger: ACTGATTTTGTAGAGGTCCAAAAATGTAGGATCTGT...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATTCTCTATGCGGTAGTTaGATAGTTCACTTAAACAGT +
Preference number: 5 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYSLCGS*IVHLNS
Trigger: ACTGTTTAAGTGAACTATCAAACTACCGCATAGAGA...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS-3UTR CAA 90 bp CATTATCGTGGTTCTGTCCAGTTATATACATGCTTTCATGATCACCTTTTCTATGGAAATATCTACGCATaGGGGATAAAAATAGCAGTA +
Preference number: 5 (lower is better)
Translates to: HYRGSVQLYTCFHDHLFYGNIYA*GIKIAV
Trigger: TACTGCTATTTTTATCCCCAATGCGTAGATATTTCC...ATAGAAAAGGTGATCATGAAAGCATGTATATAACTGGACAGAACCACGATAATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS GCA 72 bp GGCGAGTGTGAGCGCGTGTGTGCGCGTGTGGGAGTGTaGTCGGTGTGTGCGCTTGGCGCTCTGGGCCGGACT +
Preference number: 6 (lower is better)
Translates to: GECERVCARVGV*SVCALGALGRT
Trigger: AGTCCGGCCCAGAGCGCCAAGCGCACACACCGAGCACACTCCCACACGCGCACACACGCGCTCACACTCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342788.9
ENST00000436443.5
CDS CCA 72 bp GAGGAGGGGGCGAGTGTGAGCGCGTGTGTGCGCGTGTaGGAGTGTGCTCGGTGTGTGCGCTTGGCGCTCTGG +
Preference number: 6 (lower is better)
Translates to: EEGASVSACVRV*ECARCVRLALW
Trigger: CCAGAGCGCCAAGCGCACACACCGAGCACACTCCCACACGCGCACACACGCGCTCACACTCGCCCCCTCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342788.9
ENST00000436443.5
CDS CCA 72 bp GCTCTCCTCGTGGGCTCCGTTCTGGGGCAAACACGGTaGGGTCAGCACTGTACCTCTGGGTGCTACTGTCCT +
Preference number: 6 (lower is better)
Translates to: ALLVGSVLGQTR*GQHCTSGCYCP
Trigger: AGGACAGTAGCACCCAGAGGTACAGTGCTGACCCCACCGTGTTTGCCCCAGAACGGAGCCCACGAGGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CCA 72 bp TATTCTCCGTTCCTGCACACACTGACTGAGAATCGCTaGGCTGGACGGTCCCCGCCGCCACGAGAAGGCTCA +
Preference number: 6 (lower is better)
Translates to: YSPFLHTLTENR*AGRSPPPREGS
Trigger: TGAGCCTTCTCGTGGCGGCGGGGACCGTCCAGCCCAGCGATTCTCAGTCAGTGTGTGCAGGAACGGAGAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000436443.5
ENST00000484594.5
CDS CCA 72 bp GGGTCAGCACTGTACCTCTGGGTGCTACTGTCCTCTTaGACATGGGGTGCCACTGGCTTGCGTAGGGTGCCA +
Preference number: 6 (lower is better)
Translates to: GSALYLWVLLSS*TWGATGLRRVP
Trigger: TGGCACCCTACGCAAGCCAGTGGCACCCCATGTCCAAGAGGACAGTAGCACCCAGAGGTACAGTGCTGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CCA 72 bp ACCTTCCTCATCCAGCTCTCCTCGTGGGCTCCGTTCTaGGGCAAACACGGTGGGGTCAGCACTGTACCTCTG +
Preference number: 6 (lower is better)
Translates to: TFLIQLSSWAPF*GKHGGVSTVPL
Trigger: CAGAGGTACAGTGCTGACCCCACCGTGTTTGCCCCAGAACGGAGCCCACGAGGAGAGCTGGATGAGGAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CCA 72 bp AGGAGTCATGTAACCTTCCTCATCCAGCTCTCCTCGTaGGCTCCGTTCTGGGGCAAACACGGTGGGGTCAGC +
Preference number: 6 (lower is better)
Translates to: RSHVTFLIQLSS*APFWGKHGGVS
Trigger: GCTGACCCCACCGTGTTTGCCCCAGAACGGAGCCCACGAGGAGAGCTGGATGAGGAAGGTTACATGACTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CCA 72 bp GCACTGTACCTCTGGGTGCTACTGTCCTCTTGGACATaGGGTGCCACTGGCTTGCGTAGGGTGCCATTACAG +
Preference number: 6 (lower is better)
Translates to: ALYLWVLLSSWT*GATGLRRVPLQ
Trigger: CTGTAATGGCACCCTACGCAAGCCAGTGGCACCCCATGTCCAAGAGGACAGTAGCACCCAGAGGTACAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CCA 72 bp CTGCAGGTAGTCTGGGTGCTGAAGGGTGCTCCGAGGTaGCAGGCTGTGGTTCCAGTAGTCAGGGTTGTCAAA +
Preference number: 6 (lower is better)
Translates to: LQVVWVLKGAPR*QAVVPVVRVVK
Trigger: TTTGACAACCCTGACTACTGGAACCACAGCCTGCCACCTCGGAGCACCCTTCAGCACCCAGACTACCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CCA 72 bp ATGACTAGTGGGACCGTTACACCCTTGGGTGCAGTTTaGATGGCATGGGTGGCACTCCCGATCTGGATCAGC +
Preference number: 6 (lower is better)
Translates to: MTSGTVTPLGAV*MAWVALPIWIS
Trigger: GCTGATCCAGATCGGGAGTGCCACCCATGCCATCCAAACTGCACCCAAGGGTGTAACGGTCCCACTAGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS CCA 72 bp CTGAGCTTACACCACAGTATTCCGGTGTCTGTAAGGTaGAGGCGGCAGCACAGTGCCTGGCTTCAGGGAGAA +
Preference number: 6 (lower is better)
Translates to: LSLHHSIPVSVR*RRQHSAWLQGE
Trigger: TTCTCCCTGAAGCCAGGCACTGTGCTGCCGCCTCCACCTTACAGACACCGGAATACTGTGGTGTAAGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CAA 72 bp AGCCACAGCTTTACCCGCAGGAAGGAGAGGTCCCGGTaGTGCTCAATGCTGGTTATCTCCAGGTTGCCCATG +
Preference number: 6 (lower is better)
Translates to: SHSFTRRKERSR*CSMLVISRLPM
Trigger: CATGGGCAACCTGGAGATAACCAGCATTGAGCACAACCGGGACCTCTCCTTCCTGCGGGTAAAGCTGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459774.1
CDS CAA 90 bp CTCTATGCAGATCCTTCCTCTACTGAAGCGGCGACACGACAGACATaGGTCTGGCCCAGGTCCCCAACAGCCATCACTGGAACACAGATG +
Preference number: 6 (lower is better)
Translates to: LYADPSSTEAATRQT*VWPRSPTAITGTQM
Trigger: CATCTGTGTTCCAGTGATGGCTGTTGGGGACCTGGGCCAGACCAATGTCTGTCGTGTCGCCGCTTCAGTAGAGGAAGGATCTGCATAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS GCA 72 bp TCTCGAACAGACCGCAGGAAGGAGAGGTCCCGGTTGTaGTCAATGCTGGTTATCTCCAGGTTGCCCATGACA +
Preference number: 6 (lower is better)
Translates to: SRTDRRKERSRL*SMLVISRLPMT
Trigger: TGTCATGGGCAACCTGGAGATAACCAGCATTGAGCACAACCGGGACCTCTCCTTCCTGCGGTCTGTTCGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000435846.1
ENST00000436443.5
ENST00000484594.5
CDS GCA 72 bp CACAGCTTTACCCGCAGGAAGGAGAGGTCCCGGTTGTaGTCAATGCTGGTTATCTCCAGGTTGCCCATGACA +
Preference number: 6 (lower is better)
Translates to: HSFTRRKERSRL*SMLVISRLPMT
Trigger: TGTCATGGGCAACCTGGAGATAACCAGCATTGAGCACAACCGGGACCTCTCCTTCCTGCGGGTAAAGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459774.1
CDS CCA 72 bp GACATTGGTCTGGCCCAGGTCCCCAACAGCCATCACTaGAACACAGATGGTTGCACACCATTCCTTCAGCAG +
Preference number: 6 (lower is better)
Translates to: DIGLAQVPNSHH*NTDGCTPFLQQ
Trigger: CTGCTGAAGGAATGGTGTGCAACCATCTGTGTTCCAGTGATGGCTGTTGGGGACCTGGGCCAGACCAATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS CCA 72 bp ACCCTGTGCCACAGGAGCTTCTGGAATTGTGCTAGTTaGGGCTCTGTAGGGCACAGACACTCCTTGTTCAGC +
Preference number: 6 (lower is better)
Translates to: TLCHRSFWNCAS*GSVGHRHSLFS
Trigger: GCTGAACAAGGAGTGTCTGTGCCCTACAGAGCCCCAACTAGCACAATTCCAGAAGCTCCTGTGGCACAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CAA 72 bp ACTTCTCGAACAGACCGCAGGAAGGAGAGGTCCCGGTaGTGCTCAATGCTGGTTATCTCCAGGTTGCCCATG +
Preference number: 6 (lower is better)
Translates to: TSRTDRRKERSR*CSMLVISRLPM
Trigger: CATGGGCAACCTGGAGATAACCAGCATTGAGCACAACCGGGACCTCTCCTTCCTGCGGTCTGTTCGAGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000435846.1
ENST00000436443.5
ENST00000484594.5
CDS TCA 72 bp AGCAGCCTCCAGCACATTCTCGATGGCAGCAGTCACTaGCGTAAGGTCCGTAGCATCTGCCGTCACATTGTT +
Preference number: 6 (lower is better)
Translates to: SSLQHILDGSSH*RKVRSICRHIV
Trigger: AACAATGTGACGGCAGATGCTACGGACCTTACGTCAGTGACTGCTGCCATCGAGAATGTGCTGGAGGCTGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS GCA 72 bp CCTCTTGGACATGGGGTGCCACTGGCTTGCGTAGGGTaGCATTACAGCAGGAGTCATCAAAAATCTCAGCAG +
Preference number: 6 (lower is better)
Translates to: PLGHGVPLACVG*HYSRSHQKSQQ
Trigger: CTGCTGAGATTTTTGATGACTCCTGCTGTAATGGCACCCTACGCAAGCCAGTGGCACCCCATGTCCAAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CCA 72 bp TGGCATGTGAGGAGGCCATCTTCCATCTTCTCACACTaGGGGTCACACTCCACACAGATGGAGCCATTCTCA +
Preference number: 6 (lower is better)
Translates to: WHVRRPSSIFSH*GSHSTQMEPFS
Trigger: TGAGAATGGCTCCATCTGTGTGGAGTGTGACCCCCAGTGTGAGAAGATGGAAGATGGCCTCCTCACATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS CCA 72 bp AGTCTCAGATCCCGTGCTGACAATTACATGTCCAAATaGCATATCCCCCTTTCGGGCACGCGGAGGAGATCC +
Preference number: 6 (lower is better)
Translates to: SLRSRADNYMSK*HIPLSGTRRRS
Trigger: GGATCTCCTCCGCGTGCCCGAAAGGGGGATATGCCATTTGGACATGTAATTGTCAGCACGGGATCTGAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342788.9
ENST00000436443.5
CDS CCA 72 bp AATCTCAGCAGTAGCACCCTGTGCCACAGGAGCTTCTaGAATTGTGCTAGTTGGGGCTCTGTAGGGCACAGA +
Preference number: 6 (lower is better)
Translates to: NLSSSTLCHRSF*NCASWGSVGHR
Trigger: TCTGTGCCCTACAGAGCCCCAACTAGCACAATTCCAGAAGCTCCTGTGGCACAGGGTGCTACTGCTGAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CAA 72 bp CTTCAATACTTGAGCCTATGCACCCTTGGGTGCAGTTaGGATGGCATGGGTGGCACTCCCGATCTGGATCAG +
Preference number: 6 (lower is better)
Translates to: LQYLSLCTLGCS*DGMGGTPDLDQ
Trigger: CTGATCCAGATCGGGAGTGCCACCCATGCCATCCAAACTGCACCCAAGGGTGCATAGGCTCAAGTATTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260943.10
CDS CAA 90 bp GAGAAAGAAAGCCACAGCTTTACCCGCAGGAAGGAGAGGTCCCGGTaGTGCTCAATGCTGGTTATCTCCAGGTTGCCCATGACAACCTCA +
Preference number: 6 (lower is better)
Translates to: EKESHSFTRRKERSR*CSMLVISRLPMTTS
Trigger: TGAGGTTGTCATGGGCAACCTGGAGATAACCAGCATTGAGCACAACCGGGACCTCTCCTTCCTGCGGGTAAAGCTGTGGCTTTCTTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459774.1
CDS GCA 72 bp GCAGGAGTCATCAAAAATCTCAGCAGTAGCACCCTGTaGCACAGGAGCTTCTGGAATTGTGCTAGTTGGGGC +
Preference number: 6 (lower is better)
Translates to: AGVIKNLSSSTL*HRSFWNCASWG
Trigger: GCCCCAACTAGCACAATTCCAGAAGCTCCTGTGGCACAGGGTGCTACTGCTGAGATTTTTGATGACTCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CAA 72 bp GTCACTGACGTAAGGTCCGTAGCATCTGCCGTCACATaGTTCTGCACACACCGTCCTTGTCAAAGTCTGGCA +
Preference number: 6 (lower is better)
Translates to: VTDVRSVASAVT*FCTHRPCQSLA
Trigger: TGCCAGACTTTGACAAGGACGGTGTGTGCAGAACAATGTGACGGCAGATGCTACGGACCTTACGTCAGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS CAA 72 bp GTGTCTTGTGAGGACCCACTCCTTGAGGCCAGTGTCTaGCTATGTTTTCACACAGCAGAAGGGGCAAGGGAT +
Preference number: 6 (lower is better)
Translates to: VSCEDPLLEASV*LCFHTAEGARD
Trigger: ATCCCTTGCCCCTTCTGCTGTGTGAAAACATAGCAAGACACTGGCCTCAAGGAGTGGGTCCTCACAAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484474.1
CDS CAA 90 bp GAGAAGGCTCACCCAGACCCAAAGTCCTGTCGCCGGCTTCATTTTTaGGAAGTCTCAGATCCCGTGCTGACAATTACATGTCCAAATGGC +
Preference number: 6 (lower is better)
Translates to: EKAHPDPKSCRRLHF*EVSDPVLTITCPNG
Trigger: GCCATTTGGACATGTAATTGTCAGCACGGGATCTGAGACTTCCAAAAAATGAAGCCGGCGACAGGACTTTGGGTCTGGGTGAGCCTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000436443.5
ENST00000484594.5
CDS GCA 72 bp CAGTTAAGCAGCAGTTGTGATCCAATGTTATCCTTGTaGTCGTGGACATACTCCAACAGGCAGCCATGGGGC +
Preference number: 6 (lower is better)
Translates to: QLSSSCDPMLSL*SWTYSNRQPWG
Trigger: GCCCCATGGCTGCCTGTTGGAGTATGTCCACGAGCACAAGGATAACATTGGATCACAACTGCTGCTTAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS GCA 72 bp CGCTATCTCTTATCTTTTGCCTATAGTCACAGTGCCTaGCAGGCAGAAGAGCACCCCTTCCAGGTATCAGCA +
Preference number: 6 (lower is better)
Translates to: RYLLSFAYSHSA*QAEEHPFQVSA
Trigger: TGCTGATACCTGGAAGGGGTGCTCTTCTGCCTGGCAGGCACTGTGACTATAGGCAAAAGATAAGAGATAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459774.1
CDS CCA 72 bp GGCCCAGGTCCCCAACAGCCATCACTGGAACACAGATaGTTGCACACCATTCCTTCAGCAGTACAATTTTCA +
Preference number: 6 (lower is better)
Translates to: GPGPQQPSLEHR*LHTIPSAVQFS
Trigger: TGAAAATTGTACTGCTGAAGGAATGGTGTGCAACCATCTGTGTTCCAGTGATGGCTGTTGGGGACCTGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS CCA 72 bp ATAAAAATATTTTGTGCTGTACTCCTGCAGGTAGTCTaGGTGCTGAAGGGTGCTCCGAGGTGGCAGGCTGTG +
Preference number: 6 (lower is better)
Translates to: IKIFCAVLLQVV*VLKGAPRWQAV
Trigger: CACAGCCTGCCACCTCGGAGCACCCTTCAGCACCCAGACTACCTGCAGGAGTACAGCACAAAATATTTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CAA 72 bp GAGTTCTATCCATCAGGCCGATGCAGTCTTCAATACTaGAGCCTATGCACCCTTGGGTGCAGTTTGGATGGC +
Preference number: 6 (lower is better)
Translates to: EFYPSGRCSLQY*SLCTLGCSLDG
Trigger: GCCATCCAAACTGCACCCAAGGGTGCATAGGCTCAAGTATTGAAGACTGCATCGGCCTGATGGATAGAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260943.10
CDS CAA 72 bp TACACCTATCCATCAGGCCGATGCAGTCTTCAATACTaGAGCCTATGCACCCTTGGGTGCAGTTTGGATGGC +
Preference number: 6 (lower is better)
Translates to: YTYPSGRCSLQY*SLCTLGCSLDG
Trigger: GCCATCCAAACTGCACCCAAGGGTGCATAGGCTCAAGTATTGAAGACTGCATCGGCCTGATGGATAGGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463121.1
CDS CAA 90 bp ATGGCAGCAGTCACTGACGTAAGGTCCGTAGCATCTGCCGTCACATaGTTCTGCACACACCGTCCTTGTCAAAGTCTGGCAATGATTTTC +
Preference number: 6 (lower is better)
Translates to: MAAVTDVRSVASAVT*FCTHRPCQSLAMIF
Trigger: GAAAATCATTGCCAGACTTTGACAAGGACGGTGTGTGCAGAACAATGTGACGGCAGATGCTACGGACCTTACGTCAGTGACTGCTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS TCA 72 bp TTCTTGCTCTGGAAGTATAGATGGGAGGTGGGATGTTaGAAGCCTGAGGGACCAAGTACTCCTCAGCATCCA +
Preference number: 6 (lower is better)
Translates to: FLLWKYRWEVGC*KPEGPSTPQHP
Trigger: TGGATGCTGAGGAGTACTTGGTCCCTCAGGCTTTCAACATCCCACCTCCCATCTATACTTCCAGAGCAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS GCA 72 bp GACGTAAGGTCCGTAGCATCTGCCGTCACATTGTTCTaGACACACCGTCCTTGTCAAAGTCTGGCAATGATT +
Preference number: 6 (lower is better)
Translates to: DVRSVASAVTLF*THRPCQSLAMI
Trigger: AATCATTGCCAGACTTTGACAAGGACGGTGTGTGCAGAACAATGTGACGGCAGATGCTACGGACCTTACGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS GCA 72 bp AATGACCAGAATGAAGAGCCCACCAATTACTCCAGCTaGAATCAGGGGAGTTCTATCCATCAGGCCGATGCA +
Preference number: 6 (lower is better)
Translates to: NDQNEEPTNYSS*NQGSSIHQADA
Trigger: TGCATCGGCCTGATGGATAGAACTCCCCTGATTGCAGCTGGAGTAATTGGTGGGCTCTTCATTCTGGTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260943.10
CDS CCA 72 bp CCATCTTCTCACACTGGGGGTCACACTCCACACAGATaGAGCCATTCTCAAACTCCCGAAATTCACCATCAT +
Preference number: 6 (lower is better)
Translates to: PSSHTGGHTPHR*SHSQTPEIHHH
Trigger: ATGATGGTGAATTTCGGGAGTTTGAGAATGGCTCCATCTGTGTGGAGTGTGACCCCCAGTGTGAGAAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS CCA 72 bp AGCAGCAGTTGTGATCCAATGTTATCCTTGTGCTCGTaGACATACTCCAACAGGCAGCCATGGGGCATAAGT +
Preference number: 6 (lower is better)
Translates to: SSSCDPMLSLCS*TYSNRQPWGIS
Trigger: ACTTATGCCCCATGGCTGCCTGTTGGAGTATGTCCACGAGCACAAGGATAACATTGGATCACAACTGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS CCA 72 bp CGAGTCAATTCTTGCTCTGGAAGTATAGATGGGAGGTaGGATGTTGAAAGCCTGAGGGACCAAGTACTCCTC +
Preference number: 6 (lower is better)
Translates to: RVNSCSGSIDGR*DVESLRDQVLL
Trigger: GAGGAGTACTTGGTCCCTCAGGCTTTCAACATCCCACCTCCCATCTATACTTCCAGAGCAAGAATTGACTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CCA 72 bp GGTACAGTGGCTCATTCACATACTCATCCTCGGCCTTaGGTGGACCATTGGATGCATTGTGATATTCGGGAT +
Preference number: 6 (lower is better)
Translates to: GTVAHSHTHPRP*VDHWMHCDIRD
Trigger: ATCCCGAATATCACAATGCATCCAATGGTCCACCCAAGGCCGAGGATGAGTATGTGAATGAGCCACTGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CAA 72 bp CCAGGTCCCCAACAGCCATCACTGGAACACAGATGGTaGCACACCATTCCTTCAGCAGTACAATTTTCAGCT +
Preference number: 6 (lower is better)
Translates to: PGPQQPSLEHRW*HTIPSAVQFSA
Trigger: AGCTGAAAATTGTACTGCTGAAGGAATGGTGTGCAACCATCTGTGTTCCAGTGATGGCTGTTGGGGACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS CAA 72 bp TGGCATGGGTGGCACTCCCGATCTGGATCAGCATACTaGAAAATGAAACTGTTTGCCCCCTGTAAGCCATCT +
Preference number: 6 (lower is better)
Translates to: WHGWHSRSGSAY*KMKLFAPCKPS
Trigger: AGATGGCTTACAGGGGGCAAACAGTTTCATTTTCAAGTATGCTGATCCAGATCGGGAGTGCCACCCATGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS CAA 72 bp CACCCAGACCCAAAGTCCTGTCGCCGGCTTCATTTTTaGGAAGTCTCAGATCCCGTGCTGACAATTACATGT +
Preference number: 6 (lower is better)
Translates to: HPDPKSCRRLHF*EVSDPVLTITC
Trigger: ACATGTAATTGTCAGCACGGGATCTGAGACTTCCAAAAAATGAAGCCGGCGACAGGACTTTGGGTCTGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000436443.5
ENST00000484594.5
CDS CAA 72 bp CACCAGTTAAGCAGCAGTTGTGATCCAATGTTATCCTaGTGCTCGTGGACATACTCCAACAGGCAGCCATGG +
Preference number: 6 (lower is better)
Translates to: HQLSSSCDPMLS*CSWTYSNRQPW
Trigger: CCATGGCTGCCTGTTGGAGTATGTCCACGAGCACAAGGATAACATTGGATCACAACTGCTGCTTAACTGGTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS CAA 72 bp TGTGCTAGTTGGGGCTCTGTAGGGCACAGACACTCCTaGTTCAGCAGCAAAACCTCCATCTCGGTATACAAA +
Preference number: 6 (lower is better)
Translates to: CASWGSVGHRHS*FSSKTSISVYK
Trigger: TTTGTATACCGAGATGGAGGTTTTGCTGCTGAACAAGGAGTGTCTGTGCCCTACAGAGCCCCAACTAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CAA 90 bp TTCTGGAATTGTGCTAGTTGGGGCTCTGTAGGGCACAGACACTCCTaGTTCAGCAGCAAAACCTCCATCTCGGTATACAAACTGGTTTCC +
Preference number: 6 (lower is better)
Translates to: FWNCASWGSVGHRHS*FSSKTSISVYKLVS
Trigger: GGAAACCAGTTTGTATACCGAGATGGAGGTTTTGCTGCTGAACAAGGAGTGTCTGTGCCCTACAGAGCCCCAACTAGCACAATTCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342788.9
CDS CAA 90 bp TTGTTCTTCAGGTACTCAGCTTTTCCCAAGGTGTTGGCAAAGGTGTaGAGGTACAGTGGCTCATTCACATACTCATCCTCGGCCTTGGGT +
Preference number: 6 (lower is better)
Translates to: LFFRYSAFPKVLAKV*RYSGSFTYSSSALG
Trigger: ACCCAAGGCCGAGGATGAGTATGTGAATGAGCCACTGTACCTCAACACCTTTGCCAACACCTTGGGAAAAGCTGAGTACCTGAAGAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CAA 90 bp TTCTGGAATTGTGCTAGTTGGGGCTCTGTAGGGCACAGACACTCCTaGTTCAGCAGCAAAACCTCCATCTCGGTATACAAACTGGTTCCT +
Preference number: 6 (lower is better)
Translates to: FWNCASWGSVGHRHS*FSSKTSISVYKLVP
Trigger: AGGAACCAGTTTGTATACCGAGATGGAGGTTTTGCTGCTGAACAAGGAGTGTCTGTGCCCTACAGAGCCCCAACTAGCACAATTCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402597.6
ENST00000436443.5
CDS GCA 72 bp CCACAGTCTGAGCTGACATCAATGATCCTGTGCCAATaGCATCACAAGCTTTTGGGCAAATGTCAGTGCAAG +
Preference number: 6 (lower is better)
Translates to: PQSELTSMILCQ*HHKLLGKCQCK
Trigger: CTTGCACTGACATTTGCCCAAAAGCTTGTGATGGCATTGGCACAGGATCATTGATGTCAGCTCAGACTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS GCA 72 bp CAGGTCCCCAACAGCCATCACTGGAACACAGATGGTTaGACACCATTCCTTCAGCAGTACAATTTTCAGCTT +
Preference number: 6 (lower is better)
Translates to: QVPNSHHWNTDG*TPFLQQYNFQL
Trigger: AAGCTGAAAATTGTACTGCTGAAGGAATGGTGTGCAACCATCTGTGTTCCAGTGATGGCTGTTGGGGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS CCA 72 bp CAGTGGCTCATTCACATACTCATCCTCGGCCTTGGGTaGACCATTGGATGCATTGTGATATTCGGGATTATC +
Preference number: 6 (lower is better)
Translates to: QWLIHILILGLG*TIGCIVIFGII
Trigger: GATAATCCCGAATATCACAATGCATCCAATGGTCCACCCAAGGCCGAGGATGAGTATGTGAATGAGCCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CAA 72 bp AGGTACTCAGCTTTTCCCAAGGTGTTGGCAAAGGTGTaGAGGTACAGTGGCTCATTCACATACTCATCCTCG +
Preference number: 6 (lower is better)
Translates to: RYSAFPKVLAKV*RYSGSFTYSSS
Trigger: CGAGGATGAGTATGTGAATGAGCCACTGTACCTCAACACCTTTGCCAACACCTTGGGAAAAGCTGAGTACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CAA 72 bp TTCTTTTCCTGGGTGCGTTTCGCTATCTCTTATCTTTaGCCTATAGTCACAGTGCCTGCCAGGCAGAAGAGC +
Preference number: 6 (lower is better)
Translates to: FFSWVRFAISYL*PIVTVPARQKS
Trigger: GCTCTTCTGCCTGGCAGGCACTGTGACTATAGGCAAAAGATAAGAGATAGCGAAACGCACCCAGGAAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459774.1
CDS CAA 72 bp TGTCAGCAAATTGAGTGTCTTGTGAGGACCCACTCCTaGAGGCCAGTGTCTTGCTATGTTTTCACACAGCAG +
Preference number: 6 (lower is better)
Translates to: CQQIECLVRTHS*RPVSCYVFTQQ
Trigger: CTGCTGTGTGAAAACATAGCAAGACACTGGCCTCAAGGAGTGGGTCCTCACAAGACACTCAATTTGCTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484474.1
CDS CAA 90 bp CAGTTTGGATGGCATGGGTGGCACTCCCGATCTGGATCAGCATACTaGAAAATGAAACTGTTTGCCCCCTGTAAGCCATCTGGACATTTT +
Preference number: 6 (lower is better)
Translates to: QFGWHGWHSRSGSAY*KMKLFAPCKPSGHF
Trigger: AAAATGTCCAGATGGCTTACAGGGGGCAAACAGTTTCATTTTCAAGTATGCTGATCCAGATCGGGAGTGCCACCCATGCCATCCAAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS CAA 90 bp GGGTTGTCAAACGCTTTCTTGGCCTTCTCTGGCATTGACAGTATGTaGTTCTTCAGGTACTCAGCTTTTCCCAAGGTGTTGGCAAAGGTG +
Preference number: 6 (lower is better)
Translates to: GLSNAFLAFSGIDSM*FFRYSAFPKVLAKV
Trigger: CACCTTTGCCAACACCTTGGGAAAAGCTGAGTACCTGAAGAACAACATACTGTCAATGCCAGAGAAGGCCAAGAAAGCGTTTGACAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CAA 90 bp TCCAGTAGTCAGGGTTGTCAAACGCTTTCTTGGCCTTCTCTGGCATaGACAGTATGTTGTTCTTCAGGTACTCAGCTTTTCCCAAGGTGT +
Preference number: 6 (lower is better)
Translates to: SSSQGCQTLSWPSLA*TVCCSSGTQLFPRC
Trigger: ACACCTTGGGAAAAGCTGAGTACCTGAAGAACAACATACTGTCAATGCCAGAGAAGGCCAAGAAAGCGTTTGACAACCCTGACTACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS TCA 72 bp GATTTCACTAAGACATTACGGGCTGCCAAATCCCGATaGACGAGTCGTCTTTCTTCCAGGTACATCATTCCC +
Preference number: 6 (lower is better)
Translates to: DFTKTLRAAKSR*TSRLSSRYIIP
Trigger: GGGAATGATGTACCTGGAAGAAAGACGACTCGTTCATCGGGATTTGGCAGCCCGTAATGTCTTAGTGAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS TCA 72 bp CCAGGTATCAGCACACAGGTCTGCCTGTATGCATCATaGCGCCACTGTCCATTCACAAAGAAGAGAAAGAAA +
Preference number: 6 (lower is better)
Translates to: PGISTQVCLYAS*RHCPFTKKRKK
Trigger: TTTCTTTCTCTTCTTTGTGAATGGACAGTGGCGTCATGATGCATACAGGCAGACCTGTGTGCTGATACCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459774.1
CDS GCA 72 bp TGGAATCCACAGTCTGAGCTGACATCAATGATCCTGTaGCAATGCCATCACAAGCTTTTGGGCAAATGTCAG +
Preference number: 6 (lower is better)
Translates to: WNPQSELTSMIL*QCHHKLLGKCQ
Trigger: CTGACATTTGCCCAAAAGCTTGTGATGGCATTGGCACAGGATCATTGATGTCAGCTCAGACTGTGGATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS GCA 72 bp CACATACTCATCCTCGGCCTTGGGTGGACCATTGGATaGATTGTGATATTCGGGATTATCCAATGCTTGAAG +
Preference number: 6 (lower is better)
Translates to: HILILGLGWTIG*IVIFGIIQCLK
Trigger: CTTCAAGCATTGGATAATCCCGAATATCACAATGCATCCAATGGTCCACCCAAGGCCGAGGATGAGTATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CCA 72 bp TATCTCTCTGACTGTCCGAAAGACGTTCAGTTTCTCTaGGTCTATGGCTTCAATTGCATTGTAAGGGTCCCC +
Preference number: 6 (lower is better)
Translates to: YLSDCPKDVQFL*VYGFNCIVRVP
Trigger: GGGGACCCTTACAATGCAATTGAAGCCATAGACCCAGAGAAACTGAACGTCTTTCGGACAGTCAGAGAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS CAA 72 bp ACTTATGGCAACGTCCACATCCTGAACTACCATTTGTaGACACAAGAGTCAAGTTGGAAGGCCATGGGTTCC +
Preference number: 6 (lower is better)
Translates to: TYGNVHILNYHL*TQESSWKAMGS
Trigger: GGAACCCATGGCCTTCCAACTTGACTCTTGTGTCAACAAATGGTAGTTCAGGATGTGGACGTTGCCATAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484474.1
ENST00000484594.5
CDS TCA 72 bp AGGGTTGTCAAACGCTTTCTTGGCCTTCTCTGGCATTaGCAGTATGTTGTTCTTCAGGTACTCAGCTTTTCC +
Preference number: 6 (lower is better)
Translates to: RVVKRFLGLLWH*QYVVLQVLSFS
Trigger: GGAAAAGCTGAGTACCTGAAGAACAACATACTGTCAATGCCAGAGAAGGCCAAGAAAGCGTTTGACAACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS TCA 72 bp AATGCAGCTTCCTTCAGAGCAGCAATGACCTTCCCTTaGAAGACACAGATTAAGAAGATCTCACAGAGAGGG +
Preference number: 6 (lower is better)
Translates to: NAASFRAAMTFP*KTQIKKISQRG
Trigger: CCCTCTCTGTGAGATCTTCTTAATCTGTGTCTTTCAAGGGAAGGTCATTGCTGCTCTGAAGGAAGCTGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435846.1
CDS CCA 72 bp AAATACGAAGTTGAGCTTGATTGGGTGCTGTGCCACTaGGAGTTAATGGTTCCACCAACTCTGTTTCCAAGA +
Preference number: 6 (lower is better)
Translates to: KYEVELDWVLCH*ELMVPPTLFPR
Trigger: TCTTGGAAACAGAGTTGGTGGAACCATTAACTCCCAGTGGCACAGCACCCAATCAAGCTCAACTTCGTATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS CCA 72 bp CATTCACATACTCATCCTCGGCCTTGGGTGGACCATTaGATGCATTGTGATATTCGGGATTATCCAATGCTT +
Preference number: 6 (lower is better)
Translates to: HSHTHPRPWVDH*MHCDIRDYPML
Trigger: AAGCATTGGATAATCCCGAATATCACAATGCATCCAATGGTCCACCCAAGGCCGAGGATGAGTATGTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CCA 72 bp TGTGGTTCCAGTAGTCAGGGTTGTCAAACGCTTTCTTaGCCTTCTCTGGCATTGACAGTATGTTGTTCTTCA +
Preference number: 6 (lower is better)
Translates to: CGSSSQGCQTLS*PSLALTVCCSS
Trigger: TGAAGAACAACATACTGTCAATGCCAGAGAAGGCCAAGAAAGCGTTTGACAACCCTGACTACTGGAACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CAA 72 bp AACGCTTTCTTGGCCTTCTCTGGCATTGACAGTATGTaGTTCTTCAGGTACTCAGCTTTTCCCAAGGTGTTG +
Preference number: 6 (lower is better)
Translates to: NAFLAFSGIDSM*FFRYSAFPKVL
Trigger: CAACACCTTGGGAAAAGCTGAGTACCTGAAGAACAACATACTGTCAATGCCAGAGAAGGCCAAGAAAGCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CAA 72 bp CAGGGTTGTCAAACGCTTTCTTGGCCTTCTCTGGCATaGACAGTATGTTGTTCTTCAGGTACTCAGCTTTTC +
Preference number: 6 (lower is better)
Translates to: QGCQTLSWPSLA*TVCCSSGTQLF
Trigger: GAAAAGCTGAGTACCTGAAGAACAACATACTGTCAATGCCAGAGAAGGCCAAGAAAGCGTTTGACAACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CAA 90 bp ATTGACAGTATGTTGTTCTTCAGGTACTCAGCTTTTCCCAAGGTGTaGGCAAAGGTGTTGAGGTACAGTGGCTCATTCACATACTCATCC +
Preference number: 6 (lower is better)
Translates to: IDSMLFFRYSAFPKV*AKVLRYSGSFTYSS
Trigger: GGATGAGTATGTGAATGAGCCACTGTACCTCAACACCTTTGCCAACACCTTGGGAAAAGCTGAGTACCTGAAGAACAACATACTGTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS TCA 72 bp CCTGCACACAAAATGCAGCTTCCTTCAGAGCAGCAATaGCCTTCCCTTGAAAGACACAGATTAAGAAGATCT +
Preference number: 6 (lower is better)
Translates to: PAHKMQLPSEQQ*PSLERHRLRRS
Trigger: AGATCTTCTTAATCTGTGTCTTTCAAGGGAAGGTCATTGCTGCTCTGAAGGAAGCTGCATTTTGTGTGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435846.1
CDS CCA 72 bp GTAGCCTGTGACTTCTCGAACAGAAATTTTGGAGGCTaGGAAGTCCAATATCAAGGTGTCAGCAAATTGAGT +
Preference number: 6 (lower is better)
Translates to: VACDFSNRNFGG*EVQYQGVSKLS
Trigger: ACTCAATTTGCTGACACCTTGATATTGGACTTCCCAGCCTCCAAAATTTCTGTTCGAGAAGTCACAGGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484474.1
CDS TCA 72 bp TACCCAAATACCTTTATAAACCGTTCCAAAAGCACCTaGGCCAAGGACTTTTACCCTCTTCAGCTCAGTTTC +
Preference number: 6 (lower is better)
Translates to: YPNTFINRSKST*AKDFYPLQLSF
Trigger: GAAACTGAGCTGAAGAGGGTAAAAGTCCTTGGCTCAGGTGCTTTTGGAACGGTTTATAAAGGTATTTGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS CAA 90 bp ACAGAATGCTCCATATGTGTACTTTGCATTGAAATTGTGCTCCAGTaGAAAGGTGGTTGGATTGTAGACAAAGGTTTGGGGACACTGAGT +
Preference number: 6 (lower is better)
Translates to: TECSICVLCIEIVLQ*KGGWIVDKGLGTLS
Trigger: ACTCAGTGTCCCCAAACCTTTGTCTACAATCCAACCACCTTTCAACTGGAGCACAATTTCAATGCAAAGTACACATATGGAGCATTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS CAA 90 bp ATACTTGCCATGATCAGAGCTTCATCCATGAACTCCACATTTGCCTaGGGACCAGTTGTCTCATTAAGAATCTTAATAGCCACAGGAATC +
Preference number: 6 (lower is better)
Translates to: ILAMIRASSMNSTFA*GPVVSLRILIATGI
Trigger: GATTCCTGTGGCTATTAAGATTCTTAATGAGACAACTGGTCCCAAGGCAAATGTGGAGTTCATGGATGAAGCTCTGATCATGGCAAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS GCA 72 bp TGCCATGATCAGAGCTTCATCCATGAACTCCACATTTaGCTTGGGACCAGTTGTCTCATTAAGAATCTTAAT +
Preference number: 6 (lower is better)
Translates to: CHDQSFIHELHI*LGTSCLIKNLN
Trigger: ATTAAGATTCTTAATGAGACAACTGGTCCCAAGGCAAATGTGGAGTTCATGGATGAAGCTCTGATCATGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS GCA 72 bp CCAAATCCTCTTCATCCAAGAGATTCTGAAAGAACTTaGTGTCATTTGGACTGGGAAGCTTCATACGATCAT +
Preference number: 6 (lower is better)
Translates to: PNPLHPRDSERT*CHLDWEASYDH
Trigger: ATGATCGTATGAAGCTTCCCAGTCCAAATGACAGCAAGTTCTTTCAGAATCTCTTGGATGAAGAGGATTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
CDS CAA 72 bp AGTCAAGTTGGAAGGCCATGGGTTCCGAACAATATCTaGCCAATGAATGGTGTCTGCATAACAAAGGAATTT +
Preference number: 6 (lower is better)
Translates to: SQVGRPWVPNNI*PMNGVCITKEF
Trigger: AAATTCCTTTGTTATGCAGACACCATTCATTGGCAAGATATTGTTCGGAACCCATGGCCTTCCAACTTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000435846.1
ENST00000436443.5
ENST00000484474.1
ENST00000484594.5
CDS CAA 72 bp TCCATATGTGTACTTTGCATTGAAATTGTGCTCCAGTaGAAAGGTGGTTGGATTGTAGACAAAGGTTTGGGG +
Preference number: 6 (lower is better)
Translates to: SICVLCIEIVLQ*KGGWIVDKGLG
Trigger: CCCCAAACCTTTGTCTACAATCCAACCACCTTTCAACTGGAGCACAATTTCAATGCAAAGTACACATATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS CAA 72 bp TCAGCTTTTCTGTTGTCCCGGATTACTATTCTCTGGTaGATTGTGCTGAAGAGTGTTGTCCAGTTAATGGTA +
Preference number: 6 (lower is better)
Translates to: SAFLLSRITILW*IVLKSVVQLMV
Trigger: TACCATTAACTGGACAACACTCTTCAGCACAATCAACCAGAGAATAGTAATCCGGGACAACAGAAAAGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS CAA 72 bp ACCATTCCTTCAGCAGTACAATTTTCAGCTTTTCTGTaGTCCCGGATTACTATTCTCTGGTTGATTGTGCTG +
Preference number: 6 (lower is better)
Translates to: TIPSAVQFSAFL*SRITILWLIVL
Trigger: CAGCACAATCAACCAGAGAATAGTAATCCGGGACAACAGAAAAGCTGAAAATTGTACTGCTGAAGGAATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS CAA 72 bp ATGATCAGAGCTTCATCCATGAACTCCACATTTGCCTaGGGACCAGTTGTCTCATTAAGAATCTTAATAGCC +
Preference number: 6 (lower is better)
Translates to: MIRASSMNSTFA*GPVVSLRILIA
Trigger: GGCTATTAAGATTCTTAATGAGACAACTGGTCCCAAGGCAAATGTGGAGTTCATGGATGAAGCTCTGATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5
CDS GCA 72 bp TGGGTTCCGAACAATATCTTGCCAATGAATGGTGTCTaGATAACAAAGGAATTTGTTCTGGTCTACATAGAC +
Preference number: 6 (lower is better)
Translates to: WVPNNILPMNGV*ITKEFVLVYID
Trigger: GTCTATGTAGACCAGAACAAATTCCTTTGTTATGCAGACACCATTCATTGGCAAGATATTGTTCGGAACCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000435846.1
ENST00000436443.5
ENST00000484474.1
ENST00000484594.5
CDS CCA 72 bp TTTTCAGCTTTTCTGTTGTCCCGGATTACTATTCTCTaGTTGATTGTGCTGAAGAGTGTTGTCCAGTTAATG +
Preference number: 6 (lower is better)
Translates to: FSAFLLSRITIL*LIVLKSVVQLM
Trigger: CATTAACTGGACAACACTCTTCAGCACAATCAACCAGAGAATAGTAATCCGGGACAACAGAAAAGCTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260943.10
ENST00000342788.9
ENST00000402597.6
ENST00000436443.5
ENST00000484594.5