RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ERBB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000141736

Ensembl transcript IDs: ENST00000269571.10, ENST00000406381.6, ENST00000541774.5, ENST00000578199.5, ENST00000578373.5, ENST00000578630.1, ENST00000578709.5, ENST00000582648.5, ENST00000582788.5, ENST00000582818.5, ENST00000583038.5, ENST00000584014.5, ENST00000584099.1, ENST00000584450.5, ENST00000584601.5, ENST00000584684.1, ENST00000584888.1, ENST00000584908.5

Found 1563 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCACGCACTCCTGGCCCCGAAGGAACTGGCTGCAGTTGACACACTaGGTGGGCCCTGGACCCCAGCAGTGCCCTCGGGCGCACAGCTGG +
Preference number: 1 (lower is better)
Translates to: STHSWPRRNWLQLTH*VGPGPQQCPRAHSW
Trigger: CCAGCTGTGCGCCCGAGGGCACTGCTGGGGTCCAGGGCCCACCCAGTGTGTCAACTGCAGCCAGTTCCTTCGGGGCCAGGAGTGCGTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 90 bp GCCAGGCCCTCGCCCACACACTCGTCCTCTGGCCGGTTGGCAGTGTaGAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCTGGTCCCAGGGC +
Preference number: 1 (lower is better)
Translates to: ARPSPTHSSSGRLAV*SRAWCGFRKSWSQG
Trigger: GCCCTGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGAGTGTGTGGGCGAGGGCCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR TCA 90 bp CCAGTCCACTGCCCAGTTCCCTCAGTGAGCGCAGCCCCAGCCAGCTaGTGCCCAGCCCTTGCAGGGTCAGCGAGTAGGCGCCATTGTGCA +
Preference number: 1 (lower is better)
Translates to: PVHCPVPSVSAAPAS*CPALAGSASRRHCA
Trigger: TGCACAATGGCGCCTACTCGCTGACCCTGCAAGGGCTGGGCATCAGCTGGCTGGGGCTGCGCTCACTGAGGGAACTGGGCAGTGGACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR CCA 90 bp CCCACACACTCGTCCTCTGGCCGGTTGGCAGTGTGGAGCAGAGCTTaGTGCGGGTTCCGAAAGAGCTGGTCCCAGGGCACCGTGTGCACG +
Preference number: 1 (lower is better)
Translates to: PTHSSSGRLAVWSRA*CGFRKSWSQGTVCT
Trigger: CGTGCACACGGTGCCCTGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGAGTGTGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR GCA 90 bp TCCCAGGTCACCATCAAATACATCGGAGCCAGCCCCTTCGGAGGGTaGCAGTGGAGACCTGGGGGCCTCCTCTTCAGAGGGCTCCAGCCC +
Preference number: 1 (lower is better)
Translates to: SQVTIKYIGASPFGG*QWRPGGLLFRGLQP
Trigger: GGGCTGGAGCCCTCTGAAGAGGAGGCCCCCAGGTCTCCACTGGCACCCTCCGAAGGGGCTGGCTCCGATGTATTTGATGGTGACCTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 90 bp CAAATACATCGGAGCCAGCCCCTTCGGAGGGTGCCAGTGGAGACCTaGGGGCCTCCTCTTCAGAGGGCTCCAGCCCTAGTGTCAGGTCCC +
Preference number: 1 (lower is better)
Translates to: QIHRSQPLRRVPVET*GPPLQRAPALVSGP
Trigger: GGGACCTGACACTAGGGCTGGAGCCCTCTGAAGAGGAGGCCCCCAGGTCTCCACTGGCACCCTCCGAAGGGGCTGGCTCCGATGTATTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR GCA 90 bp ACACACTCGTCCTCTGGCCGGTTGGCAGTGTGGAGCAGAGCTTGGTaGGGGTTCCGAAAGAGCTGGTCCCAGGGCACCGTGTGCACGAAG +
Preference number: 1 (lower is better)
Translates to: THSSSGRLAVWSRAW*GFRKSWSQGTVCTK
Trigger: CTTCGTGCACACGGTGCCCTGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGAGTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR CCA 90 bp CAAGATCTCTGTGAGGCTTCGAAGCTGCAGCTCCCGCAGGCCTCCTaGGGAGGCCCCTGTGACAGGGGTGGTATTGTTCAGCGGGTCTCC +
Preference number: 1 (lower is better)
Translates to: QDLCEASKLQLPQAS*GGPCDRGGIVQRVS
Trigger: GGAGACCCGCTGAACAATACCACCCCTGTCACAGGGGCCTCCCCAGGAGGCCTGCGGGAGCTGCAGCTTCGAAGCCTCACAGAGATCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR TCA 90 bp CATGGCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTaGTGCCAGCAGAAGTCAGGCCTTCCCTGCTCCCTGAGGACACAT +
Preference number: 1 (lower is better)
Translates to: HGRFPWKWSEGPPTS*CQQKSGLPCSLRTH
Trigger: ATGTGTCCTCAGGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
3UTR TCA 90 bp CTCCTCAGCATCCACCAGGTCCCCCATGTCATCGTCCTCCAGCAGTaGGCGGTAGAAGGTGCTGTCCAAGGGACTGGCTGGGCCCAAGTC +
Preference number: 1 (lower is better)
Translates to: LLSIHQVPHVIVLQQ*AVEGAVQGTGWAQV
Trigger: GACTTGGGCCCAGCCAGTCCCTTGGACAGCACCTTCTACCGCTCACTGCTGGAGGACGATGACATGGGGGACCTGGTGGATGCTGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR GCA 90 bp AGCACCTTCACCTTCCTCAGCTCCGTCTCTTTCAGGATCCGCATCTaGGCCTGGTTGGGCATCGCTCCGCTAGGTGTCAGCGGCTCCACC +
Preference number: 1 (lower is better)
Translates to: STFTFLSSVSFRIRI*AWLGIAPLGVSGST
Trigger: GGTGGAGCCGCTGACACCTAGCGGAGCGATGCCCAACCAGGCGCAGATGCGGATCCTGAAAGAGACGGAGCTGAGGAAGGTGAAGGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 90 bp CGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCTaGTCCCAGGGCACCGTGTGCACGAAGCAGAGGTGGGTGTTATGG +
Preference number: 1 (lower is better)
Translates to: RLAVWSRAWCGFRKS*SQGTVCTKQRWVLW
Trigger: CCATAACACCCACCTCTGCTTCGTGCACACGGTGCCCTGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR CCA 90 bp TTCACCTTCCTCAGCTCCGTCTCTTTCAGGATCCGCATCTGCGCCTaGTTGGGCATCGCTCCGCTAGGTGTCAGCGGCTCCACCAGCTCC +
Preference number: 1 (lower is better)
Translates to: FTFLSSVSFRIRICA*LGIAPLGVSGSTSS
Trigger: GGAGCTGGTGGAGCCGCTGACACCTAGCGGAGCGATGCCCAACCAGGCGCAGATGCGGATCCTGAAAGAGACGGAGCTGAGGAAGGTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR GCA 90 bp GGCACAGGGCTTGCTGCACTTCTCACACCGCTGTGTTCCATCCTCTaGTGTCACCTCTTGGTTGTGCAGGGGGCAGACGAGGGTGCAGGA +
Preference number: 1 (lower is better)
Translates to: GTGLAALLTPLCSIL*CHLLVVQGADEGAG
Trigger: TCCTGCACCCTCGTCTGCCCCCTGCACAACCAAGAGGTGACAGCAGAGGATGGAACACAGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR GCA 90 bp CAGAAGTCAGGCCTTCCCTGCTCCCTGAGGACACATCAGGGCTTCTaGGGACTTGGCCTTCTGGTTCACACTGGCACGTCCAGACCCAGG +
Preference number: 1 (lower is better)
Translates to: QKSGLPCSLRTHQGF*GLGLLVHTGTSRPR
Trigger: CCTGGGTCTGGACGTGCCAGTGTGAACCAGAAGGCCAAGTCCGCAGAAGCCCTGATGTGTCCTCAGGGAGCAGGGAAGGCCTGACTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 90 bp TTCCGAAAGAGCTGGTCCCAGGGCACCGTGTGCACGAAGCAGAGGTaGGTGTTATGGTGGATGAGGGCCAGTCCACTGCCCAGTTCCCTC +
Preference number: 1 (lower is better)
Translates to: FRKSWSQGTVCTKQR*VLWWMRASPLPSSL
Trigger: GAGGGAACTGGGCAGTGGACTGGCCCTCATCCACCATAACACCCACCTCTGCTTCGTGCACACGGTGCCCTGGGACCAGCTCTTTCGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR CCA 90 bp GTCCTCAAAGAGCTGGGTGCCTCGCACAATCCGCAGCCTCTGCAGTaGGACCTGCCTCACTTGGTTGTGAGCGATGAGCACGTAGCCCTG +
Preference number: 1 (lower is better)
Translates to: VLKELGASHNPQPLQ*DLPHLVVSDEHVAL
Trigger: CAGGGCTACGTGCTCATCGCTCACAACCAAGTGAGGCAGGTCCCACTGCAGAGGCTGCGGATTGTGCGAGGCACCCAGCTCTTTGAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 90 bp AGGCCTTCCCTGCTCCCTGAGGACACATCAGGGCTTCTGCGGACTTaGCCTTCTGGTTCACACTGGCACGTCCAGACCCAGGTACTCTGG +
Preference number: 1 (lower is better)
Translates to: RPSLLPEDTSGLLRT*PSGSHWHVQTQVLW
Trigger: CCAGAGTACCTGGGTCTGGACGTGCCAGTGTGAACCAGAAGGCCAAGTCCGCAGAAGCCCTGATGTGTCCTCAGGGAGCAGGGAAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 90 bp ATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAGGTTCCTaGCATGGCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACC +
Preference number: 1 (lower is better)
Translates to: IWELKQEGRFLRTGS*HGRFPWKWSEGPPT
Trigger: GGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGCCATGCCAGGAACCTGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
3UTR CCA 90 bp CTGCACTTCTCACACCGCTGTGTTCCATCCTCTGCTGTCACCTCTTaGTTGTGCAGGGGGCAGACGAGGGTGCAGGATCCCACGTCCGTA +
Preference number: 1 (lower is better)
Translates to: LHFSHRCVPSSAVTS*LCRGQTRVQDPTSV
Trigger: TACGGACGTGGGATCCTGCACCCTCGTCTGCCCCCTGCACAACCAAGAGGTGACAGCAGAGGATGGAACACAGCGGTGTGAGAAGTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 90 bp GAAACTTCCAGATGGGCATGTAGGAGAGGTCAGGTTTCACACCGCTaGGGCAGCGGGCCACGCAGAAGGGAGGGTCCTTATAGTGGGCAC +
Preference number: 1 (lower is better)
Translates to: ETSRWACRRGQVSHR*GSGPRRREGPYSGH
Trigger: GTGCCCACTATAAGGACCCTCCCTTCTGCGTGGCCCGCTGCCCCAGCGGTGTGAAACCTGACCTCTCCTACATGCCCATCTGGAAGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR TCA 90 bp TCCGCAGCCTCTGCAGTGGGACCTGCCTCACTTGGTTGTGAGCGATaGGCACGTAGCCCTGCACCTCCTGGATATCCTGTAAACAGAGGG +
Preference number: 1 (lower is better)
Translates to: SAASAVGPASLGCER*ARSPAPPGYPVNRG
Trigger: CCCTCTGTTTACAGGATATCCAGGAGGTGCAGGGCTACGTGCTCATCGCTCACAACCAAGTGAGGCAGGTCCCACTGCAGAGGCTGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR TCA 90 bp CTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCCCTaGGGACACATCAGGGCTTCTGCGGACTTGGCCTTCTGGTTCACA +
Preference number: 1 (lower is better)
Translates to: LPPLDASRSQAFPAP*GHIRASADLAFWFT
Trigger: TGTGAACCAGAAGGCCAAGTCCGCAGAAGCCCTGATGTGTCCTCAGGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR GCA 90 bp TTCTCACACCGCTGTGTTCCATCCTCTGCTGTCACCTCTTGGTTGTaGAGGGGGCAGACGAGGGTGCAGGATCCCACGTCCGTAGAAAGG +
Preference number: 1 (lower is better)
Translates to: FSHRCVPSSAVTSWL*RGQTRVQDPTSVER
Trigger: CCTTTCTACGGACGTGGGATCCTGCACCCTCGTCTGCCCCCTGCACAACCAAGAGGTGACAGCAGAGGATGGAACACAGCGGTGTGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR GCA 90 bp CAGGTCCACACAGGAGTGGGTGCAGTTGATGGGGCAAGGCTGGCATaGGCCCTCCTCATCTGGAAACTTCCAGATGGGCATGTAGGAGAG +
Preference number: 1 (lower is better)
Translates to: QVHTGVGAVDGARLA*ALLIWKLPDGHVGE
Trigger: CTCTCCTACATGCCCATCTGGAAGTTTCCAGATGAGGAGGGCGCATGCCAGCCTTGCCCCATCAACTGCACCCACTCCTGTGTGGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 90 bp AGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTaGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCT +
Preference number: 1 (lower is better)
Translates to: RAKLGCGIHWTLESH*AGPQNPQRLPSAVP
Trigger: AGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
3UTR CCA 90 bp TCCCCTCTCAGGCCAGCTTCCCTAAGGCTTTCAGTACCCAGGATCTaGAAGGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTA +
Preference number: 1 (lower is better)
Translates to: SPLRPASLRLSVPRI*KERAKLGCGIHWTL
Trigger: TAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCCTTCCAGATCCTGGGTACTGAAAGCCTTAGGGAAGCTGGCCTGAGAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
3UTR CCA 90 bp CCTGTGATCTCTTCCAGAGTCTCAAACACTTGGAGCTGCTCTGGCTaGAGCGGGGCAGTGTTGGAGGCTGGGTCCCCATCAAAGCTCTCC +
Preference number: 1 (lower is better)
Translates to: PVISSRVSNTWSCSG*SGAVLEAGSPSKLS
Trigger: GGAGAGCTTTGATGGGGACCCAGCCTCCAACACTGCCCCGCTCCAGCCAGAGCAGCTCCAAGTGTTTGAGACTCTGGAAGAGATCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR CCA 90 bp ACTTGGCCTTCTGGTTCACACTGGCACGTCCAGACCCAGGTACTCTaGGTTCTCTGCCGTAGGTGTCCCTTTGAAGGTGCTGGGTGGAGC +
Preference number: 1 (lower is better)
Translates to: TWPSGSHWHVQTQVL*VLCRRCPFEGAGWS
Trigger: GCTCCACCCAGCACCTTCAAAGGGACACCTACGGCAGAGAACCCAGAGTACCTGGGTCTGGACGTGCCAGTGTGAACCAGAAGGCCAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 90 bp GAGGACACATCAGGGCTTCTGCGGACTTGGCCTTCTGGTTCACACTaGCACGTCCAGACCCAGGTACTCTGGGTTCTCTGCCGTAGGTGT +
Preference number: 1 (lower is better)
Translates to: EDTSGLLRTWPSGSH*HVQTQVLWVLCRRC
Trigger: ACACCTACGGCAGAGAACCCAGAGTACCTGGGTCTGGACGTGCCAGTGTGAACCAGAAGGCCAAGTCCGCAGAAGCCCTGATGTGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR TCA 90 bp TGGTCAGCCTCCGGTCCAAAACAGGTCACTGAGCCATTCTGGGGCTaGCACTCAGGGTGGCACGGCAAACAGTGCCTGGCATTCACATAC +
Preference number: 1 (lower is better)
Translates to: WSASGPKQVTEPFWG*HSGWHGKQCLAFTY
Trigger: GTATGTGAATGCCAGGCACTGTTTGCCGTGCCACCCTGAGTGTCAGCCCCAGAATGGCTCAGTGACCTGTTTTGGACCGGAGGCTGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR GCA 90 bp AGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTaGTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGG +
Preference number: 1 (lower is better)
Translates to: RVSLGRASESTKTPQ*CSSSNEAGPLPAIW
Trigger: CCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
3UTR CCA 90 bp CCCAGGATCTGGAAGGAAAGGGCCAAGCTGGGCTGTGGCATCCACTaGACCCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGA +
Preference number: 1 (lower is better)
Translates to: PRIWKERAKLGCGIH*TLESHWAGPQNPQR
Trigger: TCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCCTTCCAGATCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
3UTR CCA 90 bp GTGGGTGCAGTTGATGGGGCAAGGCTGGCATGCGCCCTCCTCATCTaGAAACTTCCAGATGGGCATGTAGGAGAGGTCAGGTTTCACACC +
Preference number: 1 (lower is better)
Translates to: VGAVDGARLACALLI*KLPDGHVGEVRFHT
Trigger: GGTGTGAAACCTGACCTCTCCTACATGCCCATCTGGAAGTTTCCAGATGAGGAGGGCGCATGCCAGCCTTGCCCCATCAACTGCACCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 90 bp CCAGCAGGTCAGGGATCTCCCGGGCTGGGATCCCATCGTAAGGTTTaGCCCCAAAAGTCATCAGCTCCCACACAGTCACACCATAACTCC +
Preference number: 1 (lower is better)
Translates to: PAGQGSPGLGSHRKV*PQKSSAPTQSHHNS
Trigger: GGAGTTATGGTGTGACTGTGTGGGAGCTGATGACTTTTGGGGCCAAACCTTACGATGGGATCCCAGCCCGGGAGATCCCTGACCTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR GCA 90 bp GGCAGTGTTGGAGGCTGGGTCCCCATCAAAGCTCTCCGGCAGAAATaGCAGGCTCCCAAAGATCTTCTTGCAGCCAGCAAACTCCTGGAT +
Preference number: 1 (lower is better)
Translates to: GSVGGWVPIKALRQK*QAPKDLLAASKLLD
Trigger: ATCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAGCCTGGCATTTCTGCCGGAGAGCTTTGATGGGGACCCAGCCTCCAACACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR CCA 90 bp CAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTaGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAGGTTCCTGG +
Preference number: 1 (lower is better)
Translates to: QCCSSSNEAGPLPAI*ELKQEGRFLRTGSW
Trigger: CCAGGAACCTGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
3UTR CCA 90 bp GTAACCTGTGATCTCTTCCAGAGTCTCAAACACTTGGAGCTGCTCTaGCTGGAGCGGGGCAGTGTTGGAGGCTGGGTCCCCATCAAAGCT +
Preference number: 1 (lower is better)
Translates to: VTCDLFQSLKHLELL*LERGSVGGWVPIKA
Trigger: AGCTTTGATGGGGACCCAGCCTCCAACACTGCCCCGCTCCAGCCAGAGCAGCTCCAAGTGTTTGAGACTCTGGAAGAGATCACAGGTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR TCA 90 bp TGTGCAGAATTCGTCCCCGGATTACTTGCAGGTTCTGGAAGACGCTaGGGTCAGGCAGGCTGTCCGGCCATGCTGAGATGTATAGGTAAC +
Preference number: 1 (lower is better)
Translates to: CAEFVPGLLAGSGRR*GQAGCPAMLRCIGN
Trigger: GTTACCTATACATCTCAGCATGGCCGGACAGCCTGCCTGACCTCAGCGTCTTCCAGAACCTGCAAGTAATCCGGGGACGAATTCTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR TCA 90 bp GAGAACAGGGGTGGCAGGCCCGAGAGCGGTTGGTGTCTATCAGTGTaGGAGCCAGCTGGTTGTTCTTGTGGAAGATGTCCTTCCACAAAA +
Preference number: 1 (lower is better)
Translates to: ENRGGRPESGWCLSV*EPAGCSCGRCPSTK
Trigger: TTTTGTGGAAGGACATCTTCCACAAGAACAACCAGCTGGCTCTCACACTGATAGACACCAACCGCTCTCGGGCCTGCCACCCCTGTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 90 bp AGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTaGACCCCTTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTT +
Preference number: 1 (lower is better)
Translates to: RIHKDSPVLFLFQRG*TPSSHLGTQAGRKV
Trigger: AACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
3UTR CCA 90 bp TGGCAGGCCCGAGAGCGGTTGGTGTCTATCAGTGTGAGAGCCAGCTaGTTGTTCTTGTGGAAGATGTCCTTCCACAAAATCGTGTCCTGG +
Preference number: 1 (lower is better)
Translates to: WQARERLVSISVRAS*LFLWKMSFHKIVSW
Trigger: CCAGGACACGATTTTGTGGAAGGACATCTTCCACAAGAACAACCAGCTGGCTCTCACACTGATAGACACCAACCGCTCTCGGGCCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 90 bp AGAAATGCCAGGCTCCCAAAGATCTTCTTGCAGCCAGCAAACTCCTaGATATTGGCACTGGTAACTGCCCTCACCTCTCGCAAGTGCTCC +
Preference number: 1 (lower is better)
Translates to: RNARLPKIFLQPANS*ILALVTALTSRKCS
Trigger: GGAGCACTTGCGAGAGGTGAGGGCAGTTACCAGTGCCAATATCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAGCCTGGCATTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR CCA 90 bp GTCCCTGGCCATGCGGGAGAATTCAGACACCAACTCCCGGAATCTTaGCCGACATTCAGAGTCAATCATCCAACATTTGACCATGATCAT +
Preference number: 1 (lower is better)
Translates to: VPGHAGEFRHQLPES*PTFRVNHPTFDHDH
Trigger: ATGATCATGGTCAAATGTTGGATGATTGACTCTGAATGTCGGCCAAGATTCCGGGAGTTGGTGTCTGAATTCTCCCGCATGGCCAGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CAA 90 bp GCCCACACACTCGTCCTCTGGCCGGTTGGCAGTGTGGAGCAGAGCTaGGTGCGGGTTCCGAAAGAGCTGGTCCCAGGGCACCGTGTGCAC +
Preference number: 2 (lower is better)
Translates to: AHTLVLWPVGSVEQS*VRVPKELVPGHRVH
Trigger: GTGCACACGGTGCCCTGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGAGTGTGTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR-3UTR TCA 90 bp TCCTCTGGCCGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCGCCCAGTTCCCTCAGTaGGCGCAGCCCCAGCCAGCT +
Preference number: 2 (lower is better)
Translates to: SSGRLAVWSRAWCGFRKSAQFPQ*AQPQPA
Trigger: AGCTGGCTGGGGCTGCGCTCACTGAGGGAACTGGGC...GCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR-3UTR CCA 90 bp AGGTCACCATCAAATACATCGGAGCCAGCCCCTTCGGAGGGTGCCAGTGGAGACCCTCGGGCGCACAGCTaGTGGCAGGCCAGGCCCTCG +
Preference number: 2 (lower is better)
Translates to: RSPSNTSEPAPSEGASGDPRAHS*WQARPS
Trigger: CGAGGGCCTGGCCTGCCACCAGCTGTGCGCCCGAGG...GTCTCCACTGGCACCCTCCGAAGGGGCTGGCTCCGATGTATTTGATGGTGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CAA 90 bp GCATGGCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTaGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCCCTGAGGACACA +
Preference number: 2 (lower is better)
Translates to: AWQVPLEVVGGPSHL*MPAEVRPSLLPEDT
Trigger: TGTGTCCTCAGGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGCCATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
3UTR-3UTR TCA 90 bp GCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAGCCTTCCCTGCTCCCTaGGGACACATCAGGGCTTCT +
Preference number: 2 (lower is better)
Translates to: AGSPGSGRRALPPLDASRAFPAP*GHIRAS
Trigger: AGAAGCCCTGATGTGTCCTCAGGGAGCAGGGAAGGC...TCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
3UTR-3UTR TCA 90 bp CGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCTGGTCCCAGGGTTCTGGAAGACGCTaGGGTCAGGCAGGCTGTCCG +
Preference number: 2 (lower is better)
Translates to: RLAVWSRAWCGFRKSWSQGSGRR*GQAGCP
Trigger: CGGACAGCCTGCCTGACCTCAGCGTCTTCCAGAACC...CTGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR-3UTR CCA 90 bp AGTCCACTGCCCAGTTCCCTCAGTGAGCGCAGCCCCAGCCAGCTGATGCCCAGCGGCAGTGTTGGAGGCTaGGTCCCCATCAAAGCTCTC +
Preference number: 2 (lower is better)
Translates to: SPLPSSLSERSPSQLMPSGSVGG*VPIKAL
Trigger: GAGAGCTTTGATGGGGACCCAGCCTCCAACACTGCC...GCTGGGCATCAGCTGGCTGGGGCTGCGCTCACTGAGGGAACTGGGCAGTGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR-3UTR CCA 90 bp GAAACTTCCAGATGGGCATGTAGGAGAGGTCAGGTTTCACACCGCTGGGGCAGCCTCCCGCAGGCCTCCTaGGGAGGCCCCTGTGACAGG +
Preference number: 2 (lower is better)
Translates to: ETSRWACRRGQVSHRWGSLPQAS*GGPCDR
Trigger: CCTGTCACAGGGGCCTCCCCAGGAGGCCTGCGGGAG...GCTGCCCCAGCGGTGTGAAACCTGACCTCTCCTACATGCCCATCTGGAAGTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CAA 90 bp ACCTTCCTCAGCTCCGTCTCTTTCAGGATCCGCATCTGCGCCTGGTaGGGCATCGCTCCGCTAGGTGTCAGCGGCTCCACCAGCTCCGTT +
Preference number: 2 (lower is better)
Translates to: TFLSSVSFRIRICAW*GIAPLGVSGSTSSV
Trigger: AACGGAGCTGGTGGAGCCGCTGACACCTAGCGGAGCGATGCCCAACCAGGCGCAGATGCGGATCCTGAAAGAGACGGAGCTGAGGAAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR TCA 90 bp TGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCTGGTCCCAGGGCAGCCTTCCCTGCTCCCTaGGGACACATCAGGGCTTCT +
Preference number: 2 (lower is better)
Translates to: WQCGAELGAGSERAGPRAAFPAP*GHIRAS
Trigger: AGAAGCCCTGATGTGTCCTCAGGGAGCAGGGAAGGC...TGCCCTGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR GCA 90 bp AGTCCACTGCCCAGTTCCCTCAGTGAGCGCAGCCCCAGCCAGCTGATGCCCAGCCTCGCAAGTGCTCCATaGCCAGACCATAGCACACTC +
Preference number: 2 (lower is better)
Translates to: SPLPSSLSERSPSQLMPSLASAP*PDHSTL
Trigger: GAGTGTGCTATGGTCTGGGCATGGAGCACTTGCGAG...GCTGGGCATCAGCTGGCTGGGGCTGCGCTCACTGAGGGAACTGGGCAGTGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR-3UTR GCA 90 bp GGTACTGTGGGGTCCTCACTGTACCGCTGTAGAGGGCTGGGGTCATGTGTGGGGCCTCAAAGAGCTGGGTaGCTCGCACAATCCGCAGCC +
Preference number: 2 (lower is better)
Translates to: GTVGSSLYRCRGLGSCVGPQRAG*LAQSAA
Trigger: GGCTGCGGATTGTGCGAGGCACCCAGCTCTTTGAGG...CCCCACACATGACCCCAGCCCTCTACAGCGGTACAGTGAGGACCCCACAGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR CCA 90 bp GACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGCATGGCAGGTTCCCCTaGAAGTGGTCGGAGGGCCCT +
Preference number: 2 (lower is better)
Translates to: DSPVLFLFQRGWTPSSHLHGRFP*KWSEGP
Trigger: AGGGCCCTCCGACCACTTCCAGGGGAACCTGCCATG...CAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
3UTR-3UTR CCA 90 bp TGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCTGGTCCCAGGGCAGGCCAAGCTGGGCTGTaGCATCCACTGGACCCTAGA +
Preference number: 2 (lower is better)
Translates to: WQCGAELGAGSERAGPRAGQAGL*HPLDPR
Trigger: TCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCC...TGCCCTGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR CCA 90 bp AGTCCACTGCCCAGTTCCCTCAGTGAGCGCAGCCCCAGCCAGCTGATGCCCAGCAGGTGGGTGTTATGGTaGATGAGGGCCAGTCCACTG +
Preference number: 2 (lower is better)
Translates to: SPLPSSLSERSPSQLMPSRWVLW*MRASPL
Trigger: CAGTGGACTGGCCCTCATCCACCATAACACCCACCT...GCTGGGCATCAGCTGGCTGGGGCTGCGCTCACTGAGGGAACTGGGCAGTGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR-3UTR TCA 90 bp GCCTCCTCTTCAGAGGGCTCCAGCCCTAGTGTCAGGTCCCCACCGCCACTCCTGTCCAAAACAGGTCACTaGGCCATTCTGGGGCTGACA +
Preference number: 2 (lower is better)
Translates to: ASSSEGSSPSVRSPPPLLSKTGH*AILGLT
Trigger: TGTCAGCCCCAGAATGGCTCAGTGACCTGTTTTGGA...CAGGAGTGGCGGTGGGGACCTGACACTAGGGCTGGAGCCCTCTGAAGAGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR GCA 90 bp ACACTCGTCCTCTGGCCGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGCGTCCCCGGATTACTTaGAGGTTCTGGAAGACGCTG +
Preference number: 2 (lower is better)
Translates to: TLVLWPVGSVEQSLVRVPRPRIT*RFWKTL
Trigger: CAGCGTCTTCCAGAACCTGCAAGTAATCCGGGGACG...CGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR-3UTR CCA 90 bp TCCTCTGGCCGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCAGCTGGGGGTTCCGCTaGATCAAGACCCCTCCTTTC +
Preference number: 2 (lower is better)
Translates to: SSGRLAVWSRAWCGFRKSSWGFR*IKTPPF
Trigger: GAAAGGAGGGGTCTTGATCCAGCGGAACCCCCAGCT...GCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CAA 90 bp GGTCAGCGAGTAGGCGCCATTGTGCAGAATTCGTCCCCGGATTACTaGCAGGTTCTGGAAGACGCTGAGGTCAGGCAGGCTGTCCGGCCA +
Preference number: 2 (lower is better)
Translates to: GQRVGAIVQNSSPDY*QVLEDAEVRQAVRP
Trigger: TGGCCGGACAGCCTGCCTGACCTCAGCGTCTTCCAGAACCTGCAAGTAATCCGGGGACGAATTCTGCACAATGGCGCCTACTCGCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR-3UTR TCA 90 bp GAAACTTCCAGATGGGCATGTAGGAGAGGTCAGGTTTCACACCGCTGGGGCAGCGGAACTGGCTGCAGTTaGCACACTGGGTGGGCCCTG +
Preference number: 2 (lower is better)
Translates to: ETSRWACRRGQVSHRWGSGTGCS*HTGWAL
Trigger: CAGGGCCCACCCAGTGTGTCAACTGCAGCCAGTTCC...GCTGCCCCAGCGGTGTGAAACCTGACCTCTCCTACATGCCCATCTGGAAGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR GCA 90 bp TGCTCTGGCTGGAGCGGGGCAGTGTTGGAGGCTGGGTCCCCATCAAAGCTCTCCATTGGCACTGGTAACTaGCCTCACCTCTCGCAAGTG +
Preference number: 2 (lower is better)
Translates to: CSGWSGAVLEAGSPSKLSIGTGN*PHLSQV
Trigger: CACTTGCGAGAGGTGAGGGCAGTTACCAGTGCCAAT...GGAGAGCTTTGATGGGGACCCAGCCTCCAACACTGCCCCGCTCCAGCCAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR-3UTR GCA 90 bp GGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCAGGGCCGCTCTCCGGCAGAAATaGCAGGCTCCCAAAGATCTT +
Preference number: 2 (lower is better)
Translates to: GQAGLWHPLDPRVSLGRAALRQK*QAPKDL
Trigger: AAGATCTTTGGGAGCCTGGCATTTCTGCCGGAGAGC...GGCCCTGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR CCA 90 bp GGTACTGTGGGGTCCTCACTGTACCGCTGTAGAGGGCTGGGGTCATGTGTGGGGGGCTGTGGCATCCACTaGACCCTAGAGTCTCATTGG +
Preference number: 2 (lower is better)
Translates to: GTVGSSLYRCRGLGSCVGGCGIH*TLESHW
Trigger: CCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCC...CCCCACACATGACCCCAGCCCTCTACAGCGGTACAGTGAGGACCCCACAGTACC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR CCA 90 bp TGCCCAGACCATAGCACACTCGGGCACAGGGCTTGCTGCACTTCTCACACCGCTGTGTGGAGCAGAGCTTaGTGCGGGTTCCGAAAGAGC +
Preference number: 2 (lower is better)
Translates to: CPDHSTLGHRACCTSHTAVWSRA*CGFRKS
Trigger: GCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACAC...AGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGTGTGCTATGGTCTGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR CAA 90 bp AAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATaGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCC +
Preference number: 2 (lower is better)
Translates to: KGQAGLWHPLDPRVS*GRASESTKTPQCCS
Trigger: GGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
3UTR CAA 90 bp CACTTCTCACACCGCTGTGTTCCATCCTCTGCTGTCACCTCTTGGTaGTGCAGGGGGCAGACGAGGGTGCAGGATCCCACGTCCGTAGAA +
Preference number: 2 (lower is better)
Translates to: HFSHRCVPSSAVTSW*CRGQTRVQDPTSVE
Trigger: TTCTACGGACGTGGGATCCTGCACCCTCGTCTGCCCCCTGCACAACCAAGAGGTGACAGCAGAGGATGGAACACAGCGGTGTGAGAAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR TCA 90 bp AGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCGGTTCTGGAAGACGCTaGGGTCAGGCAGGCTGTCCG +
Preference number: 2 (lower is better)
Translates to: SLIGQGLRIHKDSPVLFLGSGRR*GQAGCP
Trigger: CGGACAGCCTGCCTGACCTCAGCGTCTTCCAGAACC...GAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR GCA 90 bp GCAGGGTCAGCGAGTAGGCGCCATTGTGCAGAATTCGTCCCCGGATTACTTGCACTCGGGCACAGGGCTTaGTGCACTTCTCACACCGCT +
Preference number: 2 (lower is better)
Translates to: AGSASRRHCAEFVPGLLALGHRA*CTSHTA
Trigger: AGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAG...TGCAAGTAATCCGGGGACGAATTCTGCACAATGGCGCCTACTCGCTGACCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR-3UTR GCA 90 bp AGCTTGGTGCGGGTTCCGAAAGAGCTGGTCCCAGGGCACCGTGTGCACGAAGCAGCTCTCCGGCAGAAATaGCAGGCTCCCAAAGATCTT +
Preference number: 2 (lower is better)
Translates to: SLVRVPKELVPGHRVHEAALRQK*QAPKDL
Trigger: AAGATCTTTGGGAGCCTGGCATTTCTGCCGGAGAGC...TGCTTCGTGCACACGGTGCCCTGGGACCAGCTCTTTCGGAACCCGCACCAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR-3UTR CCA 90 bp CTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCATGGCAGGTTCCCCTaGAAGTGGTCGGAGGGCCCT +
Preference number: 2 (lower is better)
Translates to: LRIHKDSPVLFLFQRGWTHGRFP*KWSEGP
Trigger: AGGGCCCTCCGACCACTTCCAGGGGAACCTGCCATG...GGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
3UTR-3UTR CCA 90 bp CCGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCTGGTCCCAACCCTAGAGTCTCATTaGGCAGGGCCTCAGAATCCA +
Preference number: 2 (lower is better)
Translates to: PVGSVEQSLVRVPKELVPTLESH*AGPQNP
Trigger: TGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGT...TGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR CCA 90 bp AGTCCACTGCCCAGTTCCCTCAGTGAGCGCAGCCCCAGCCAGCTGATGCCCAGCCAGCCAGCAAACTCCTaGATATTGGCACTGGTAACT +
Preference number: 2 (lower is better)
Translates to: SPLPSSLSERSPSQLMPSQPANS*ILALVT
Trigger: AGTTACCAGTGCCAATATCCAGGAGTTTGCTGGCTG...GCTGGGCATCAGCTGGCTGGGGCTGCGCTCACTGAGGGAACTGGGCAGTGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR-3UTR CCA 90 bp TCCTCTGGCCGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCAGAGTCTCAAACACTTaGAGCTGCTCTGGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: SSGRLAVWSRAWCGFRKSRVSNT*SCSGWS
Trigger: GCTCCAGCCAGAGCAGCTCCAAGTGTTTGAGACTCT...GCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR-3UTR CCA 90 bp CCCAGGTACTCTGGGTTCTCTGCCGTAGGTGTCCCTTTGAAGGTGCTGGGTGGAGACCCCATTCTTCCCTaGGGAGAGAGTCTTGGGCCT +
Preference number: 2 (lower is better)
Translates to: PRYSGFSAVGVPLKVLGGDPILP*GESLGP
Trigger: AGGCCCAAGACTCTCTCCCCAGGGAAGAATGGGGTC...TCCACCCAGCACCTTCAAAGGGACACCTACGGCAGAGAACCCAGAGTACCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
3UTR CAA 90 bp AGCAGTCTCCGCATCGTGTACTTCCGGATCTTCTGCTGCCGTCGCTaGATGAGGATCCCAAAGACCACCCCCAAGACCACGACCAGCAGA +
Preference number: 2 (lower is better)
Translates to: SSLRIVYFRIFCCRR*MRIPKTTPKTTTSR
Trigger: TCTGCTGGTCGTGGTCTTGGGGGTGGTCTTTGGGATCCTCATCAAGCGACGGCAGCAGAAGATCCGGAAGTACACGATGCGGAGACTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR TCA 90 bp TCCTCTGGCCGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCTGGTGTCTATCAGTGTaGGAGCCAGCTGGTTGTTCT +
Preference number: 2 (lower is better)
Translates to: SSGRLAVWSRAWCGFRKSWCLSV*EPAGCS
Trigger: AGAACAACCAGCTGGCTCTCACACTGATAGACACCA...GCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR GCA 90 bp CATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAGGGCACAGGGCTTGCTaGACTTCTCACACCGCTGTG +
Preference number: 2 (lower is better)
Translates to: HWAGPQNPQRLPSAVPLPGHRAC*TSHTAV
Trigger: CACAGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCC...TGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR GCA 90 bp AGGGCCGCTTCCCCTCTCAGGCCAGCTTCCCTAAGGCTTTCAGTACCCAGGATCATTGGCACTGGTAACTaGCCTCACCTCTCGCAAGTG +
Preference number: 2 (lower is better)
Translates to: RAASPLRPASLRLSVPRIIGTGN*PHLSQV
Trigger: CACTTGCGAGAGGTGAGGGCAGTTACCAGTGCCAAT...GATCCTGGGTACTGAAAGCCTTAGGGAAGCTGGCCTGAGAGGGGAAGCGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CAA 90 bp GGGGGCAGTACTAGGTTTCAGGGACAGTCTCTGAATGGGTCGCTTTaGTTCTTAGACACTCCCTTAGGGCCGCTTCCCCTCTCAGGCCAG +
Preference number: 2 (lower is better)
Translates to: GGSTRFQGQSLNGSL*FLDTPLGPLPLSGQ
Trigger: CTGGCCTGAGAGGGGAAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGAAACCTAGTACTGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
3UTR CAA 90 bp GCCAGGCTCCCAAAGATCTTCTTGCAGCCAGCAAACTCCTGGATATaGGCACTGGTAACTGCCCTCACCTCTCGCAAGTGCTCCATGCCC +
Preference number: 2 (lower is better)
Translates to: ARLPKIFLQPANSWI*ALVTALTSRKCSMP
Trigger: GGGCATGGAGCACTTGCGAGAGGTGAGGGCAGTTACCAGTGCCAATATCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAGCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR CAA 90 bp GTCTCGTCAATGTCCAGCAGCCGAGCCAGCCCGAAGTCTGTAATTTaGACATGGTTGGGACTCTTGACCAGCACGTTCCGAGCGGCCAAG +
Preference number: 2 (lower is better)
Translates to: VSSMSSSRASPKSVI*TWLGLLTSTFRAAK
Trigger: CTTGGCCGCTCGGAACGTGCTGGTCAAGAGTCCCAACCATGTCAAAATTACAGACTTCGGGCTGGCTCGGCTGCTGGACATTGACGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR TCA 90 bp CTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTCCCCTCTCAGCCTTCCCTGCTCCCTaGGGACACATCAGGGCTTCT +
Preference number: 2 (lower is better)
Translates to: LNGSLLFLDTPLGPLPLSAFPAP*GHIRAS
Trigger: AGAAGCCCTGATGTGTCCTCAGGGAGCAGGGAAGGC...TGAGAGGGGAAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
3UTR-3UTR TCA 90 bp CAGCGAGTAGGCGCCATTGTGCAGAATTCGTCCCCGGATTACTTGCAGGTTCTGCTTGGTTGTGAGCGATaGGCACGTAGCCCTGCACCT +
Preference number: 2 (lower is better)
Translates to: QRVGAIVQNSSPDYLQVLLGCER*ARSPAP
Trigger: AGGTGCAGGGCTACGTGCTCATCGCTCACAACCAAG...CAGAACCTGCAAGTAATCCGGGGACGAATTCTGCACAATGGCGCCTACTCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR CCA 90 bp CCCACACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATCATGGCAGGTTCCCCTaGAAGTGGTCGGAGGGCCCT +
Preference number: 2 (lower is better)
Translates to: PTLASPYNTHSPPGSLFHHGRFP*KWSEGP
Trigger: AGGGCCCTCCGACCACTTCCAGGGGAACCTGCCATG...ATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
3UTR-3UTR CCA 90 bp CGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCTGGTCCCAGCAGCCAGCAAACTCCTaGATATTGGCACTGGTAACT +
Preference number: 2 (lower is better)
Translates to: RLAVWSRAWCGFRKSWSQQPANS*ILALVT
Trigger: AGTTACCAGTGCCAATATCCAGGAGTTTGCTGGCTG...CTGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR-3UTR CCA 90 bp GTTCTTAGACACTCCCTTAGGGCCGCTTCCCCTCTCAGGCCAGCTTCCCTAAGGAGAGTCTCAAACACTTaGAGCTGCTCTGGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: VLRHSLRAASPLRPASLRRVSNT*SCSGWS
Trigger: GCTCCAGCCAGAGCAGCTCCAAGTGTTTGAGACTCT...CCTTAGGGAAGCTGGCCTGAGAGGGGAAGCGGCCCTAAGGGAGTGTCTAAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR CCA 90 bp TTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACCCCCTTCCAGCCATCTaGGAACTCAAGCAGGAAGGA +
Preference number: 2 (lower is better)
Translates to: LGRASESTKTPQCCSSSNPLPAI*ELKQEG
Trigger: TCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGG...GTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
3UTR-3UTR CCA 90 bp GCCAGGCTCCCAAAGATCTTCTTGCAGCCAGCAAACTCCTGGATATTGGCACTGGTGTGGAGCAGAGCTTaGTGCGGGTTCCGAAAGAGC +
Preference number: 2 (lower is better)
Translates to: ARLPKIFLQPANSWILALVWSRA*CGFRKS
Trigger: GCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACAC...CAGTGCCAATATCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAGCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR-3UTR TCA 90 bp ACTCGTCCTCTGGCCGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAATGTATAGGTAACCTGTaGTCTCTTCCAGAGTCTCAA +
Preference number: 2 (lower is better)
Translates to: TRPLAGWQCGAELGAGSECIGNL*SLPESQ
Trigger: TTGAGACTCTGGAAGAGATCACAGGTTACCTATACA...TTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR-3UTR GCA 90 bp AGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCACACATCAGGGCTTCTaGGGACTTGGCCTTCTGGTT +
Preference number: 2 (lower is better)
Translates to: SLIGQGLRIHKDSPVLFLTHQGF*GLGLLV
Trigger: AACCAGAAGGCCAAGTCCGCAGAAGCCCTGATGTGT...GAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR CCA 90 bp AGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCGCTGTTCCTTCCTCATaGGGGGCAGTACTAGGTTTC +
Preference number: 2 (lower is better)
Translates to: SLIGQGLRIHKDSPVLFLAVPSS*GAVLGF
Trigger: GAAACCTAGTACTGCCCCCCATGAGGAAGGAACAGC...GAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
3UTR CAA 90 bp CCATCAAAGCTCTCCGGCAGAAATGCCAGGCTCCCAAAGATCTTCTaGCAGCCAGCAAACTCCTGGATATTGGCACTGGTAACTGCCCTC +
Preference number: 2 (lower is better)
Translates to: PSKLSGRNARLPKIF*QPANSWILALVTAL
Trigger: GAGGGCAGTTACCAGTGCCAATATCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAGCCTGGCATTTCTGCCGGAGAGCTTTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR-3UTR TCA 90 bp TTTCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGGCCTTCCCTGCTCCCTaGGGACACATCAGGGCTTCT +
Preference number: 2 (lower is better)
Translates to: FQGQSLNGSLLFLDTPLGAFPAP*GHIRAS
Trigger: AGAAGCCCTGATGTGTCCTCAGGGAGCAGGGAAGGC...CCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
3UTR-3UTR GCA 90 bp CTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCACAAAGACTCCCCAGTaGTGTTCCTCTTCCAACGAG +
Preference number: 2 (lower is better)
Translates to: LRIHKDSPVLFLFQRGWTTKTPQ*CSSSNE
Trigger: CTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGT...GGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
3UTR-3UTR CCA 90 bp CAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGTTCCTTCCTCATGGCAGGTTCCCCTaGAAGTGGTCGGAGGGCCCT +
Preference number: 2 (lower is better)
Translates to: QKSTLYKAWILTPLLFLPHGRFP*KWSEGP
Trigger: AGGGCCCTCCGACCACTTCCAGGGGAACCTGCCATG...AGGAAGGAACAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
3UTR-3UTR CCA 90 bp GGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTGGCTGTGGCATCCACTaGACCCTAGAGTCTCATTGG +
Preference number: 2 (lower is better)
Translates to: GQSLNGSLLFLDTPLGPLGCGIH*TLESHW
Trigger: CCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCC...AAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
3UTR-3UTR GCA 90 bp CTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTCCCCTCTCAACAAAGACTCCCCAGTaGTGTTCCTCTTCCAACGAG +
Preference number: 2 (lower is better)
Translates to: LNGSLLFLDTPLGPLPLSTKTPQ*CSSSNE
Trigger: CTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGT...TGAGAGGGGAAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
3UTR-3UTR CCA 90 bp TCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCACCCTAGAGTCTCATTaGGCAGGGCCTCAGAATCCA +
Preference number: 2 (lower is better)
Translates to: SGTVSEWVAFVLRHSLRATLESH*AGPQNP
Trigger: TGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGT...GGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
3UTR-3UTR CCA 90 bp CCCACACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATGCTGTTCCTTCCTCATaGGGGGCAGTACTAGGTTTC +
Preference number: 2 (lower is better)
Translates to: PTLASPYNTHSPPGSLFHAVPSS*GAVLGF
Trigger: GAAACCTAGTACTGCCCCCCATGAGGAAGGAACAGC...ATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
3UTR-3UTR GCA 90 bp ACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTCCACAAAGACTCCCCAGTaGTGTTCCTCTTCCAACGAG +
Preference number: 2 (lower is better)
Translates to: TVSEWVAFVLRHSLRAASTKTPQ*CSSSNE
Trigger: CTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGT...GGAAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
3UTR-3UTR CCA 90 bp AGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCGGGACAGTCTCTGAATaGGTCGCTTTTGTTCTTAGA +
Preference number: 2 (lower is better)
Translates to: SLIGQGLRIHKDSPVLFLGTVSE*VAFVLR
Trigger: TCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCC...GAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
3UTR-3UTR CCA 90 bp GAAACTTCCAGATGGGCATGTAGGAGAGGTCAGGTTTCACACCGCTGGGGCAGCAGCTGGTTGTTCTTGTaGAAGATGTCCTTCCACAAA +
Preference number: 2 (lower is better)
Translates to: ETSRWACRRGQVSHRWGSSWLFL*KMSFHK
Trigger: TTTGTGGAAGGACATCTTCCACAAGAACAACCAGCT...GCTGCCCCAGCGGTGTGAAACCTGACCTCTCCTACATGCCCATCTGGAAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR CCA 90 bp CACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATCTTTTCAGTACCCAGGATCTaGAAGGAAAGGGCCAAGCTG +
Preference number: 2 (lower is better)
Translates to: HLPPHTTPILPLGLYFIFSVPRI*KERAKL
Trigger: CAGCTTGGCCCTTTCCTTCCAGATCCTGGGTACTGA...AAAGATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
3UTR-3UTR GCA 90 bp CACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATCTTTACAAAGACTCCCCAGTaGTGTTCCTCTTCCAACGAG +
Preference number: 2 (lower is better)
Translates to: HLPPHTTPILPLGLYFIFTKTPQ*CSSSNE
Trigger: CTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGT...AAAGATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
3UTR-3UTR TCA 90 bp CAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGTTCCTTCCTTTCAGGGACAGTCTCTaGATGGGTCGCTTTTGTTCT +
Preference number: 2 (lower is better)
Translates to: QKSTLYKAWILTPLLFLPFRDSL*MGRFCS
Trigger: AGAACAAAAGCGACCCATTCAGAGACTGTCCCTGAA...AGGAAGGAACAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
3UTR-3UTR GCA 90 bp AAAACTAAACAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGCTCGCAAGTGCTCCATaGCCAGACCATAGCACACTC +
Preference number: 2 (lower is better)
Translates to: KTKQKSTLYKAWILTPLLLASAP*PDHSTL
Trigger: GAGTGTGCTATGGTCTGGGCATGGAGCACTTGCGAG...CAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTGTTTAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CAA 90 bp ACACCAGCCATCACGTATGCTTCGTCTAAGATTTCTTTGTTGGCTTaGGGGGATGTGTTTTCCCTCAACACTTTGATGGCCACTGGAATT +
Preference number: 2 (lower is better)
Translates to: TPAITYASSKISLLA*GDVFSLNTLMATGI
Trigger: AATTCCAGTGGCCATCAAAGTGTTGAGGGAAAACACATCCCCCAAAGCCAACAAAGAAATCTTAGACGAAGCATACGTGATGGCTGGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR CCA 90 bp AAAACTAAACAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGTCAGTACCCAGGATCTaGAAGGAAAGGGCCAAGCTG +
Preference number: 2 (lower is better)
Translates to: KTKQKSTLYKAWILTPLLSVPRI*KERAKL
Trigger: CAGCTTGGCCCTTTCCTTCCAGATCCTGGGTACTGA...CAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTGTTTAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
3UTR CCA 72 bp GGCCCTGGACCCCAGCAGTGCCCTCGGGCGCACAGCTaGTGGCAGGCCAGGCCCTCGCCCACACACTCGTCC +
Preference number: 3 (lower is better)
Translates to: GPGPQQCPRAHS*WQARPSPTHSS
Trigger: GGACGAGTGTGTGGGCGAGGGCCTGGCCTGCCACCAGCTGTGCGCCCGAGGGCACTGCTGGGGTCCAGGGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR GCA 72 bp CAGTTGACACACTGGGTGGGCCCTGGACCCCAGCAGTaGCCTCGGGCGCACAGCTGGTGGCAGGCCAGGCCC +
Preference number: 3 (lower is better)
Translates to: QLTHWVGPGPQQ*PRAHSWWQARP
Trigger: GGGCCTGGCCTGCCACCAGCTGTGCGCCCGAGGGCACTGCTGGGGTCCAGGGCCCACCCAGTGTGTCAACTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 72 bp CCTGGACCCCAGCAGTGCCCTCGGGCGCACAGCTGGTaGCAGGCCAGGCCCTCGCCCACACACTCGTCCTCT +
Preference number: 3 (lower is better)
Translates to: PGPQQCPRAHSW*QARPSPTHSSS
Trigger: AGAGGACGAGTGTGTGGGCGAGGGCCTGGCCTGCCACCAGCTGTGCGCCCGAGGGCACTGCTGGGGTCCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 72 bp CCACCGCCACTCCTGGTAGATGAGCTGCGGTGCCTGTaGTGGACCATGCCCCCAGCGCCCGGGGCAGGGTCT +
Preference number: 3 (lower is better)
Translates to: PPPLLVDELRCL*WTMPPAPGAGS
Trigger: AGACCCTGCCCCGGGCGCTGGGGGCATGGTCCACCACAGGCACCGCAGCTCATCTACCAGGAGTGGCGGTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 72 bp CGGAGCCAGCCCCTTCGGAGGGTGCCAGTGGAGACCTaGGGGCCTCCTCTTCAGAGGGCTCCAGCCCTAGTG +
Preference number: 3 (lower is better)
Translates to: RSQPLRRVPVET*GPPLQRAPALV
Trigger: CACTAGGGCTGGAGCCCTCTGAAGAGGAGGCCCCCAGGTCTCCACTGGCACCCTCCGAAGGGGCTGGCTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR TCA 72 bp TGCCCAGTTCCCTCAGTGAGCGCAGCCCCAGCCAGCTaGTGCCCAGCCCTTGCAGGGTCAGCGAGTAGGCGC +
Preference number: 3 (lower is better)
Translates to: CPVPSVSAAPAS*CPALAGSASRR
Trigger: GCGCCTACTCGCTGACCCTGCAAGGGCTGGGCATCAGCTGGCTGGGGCTGCGCTCACTGAGGGAACTGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR TCA 72 bp CCACGCACTCCTGGCCCCGAAGGAACTGGCTGCAGTTaGCACACTGGGTGGGCCCTGGACCCCAGCAGTGCC +
Preference number: 3 (lower is better)
Translates to: PRTPGPEGTGCS*HTGWALDPSSA
Trigger: GGCACTGCTGGGGTCCAGGGCCCACCCAGTGTGTCAACTGCAGCCAGTTCCTTCGGGGCCAGGAGTGCGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR GCA 72 bp ACTGCTCATGGCAGCAGTCAGTGGGCAGTGGCCCCTTaGAGCGGGCACAGCCACCGGCACAGACAGTGCGCG +
Preference number: 3 (lower is better)
Translates to: TAHGSSQWAVAP*SGHSHRHRQCA
Trigger: CGCGCACTGTCTGTGCCGGTGGCTGTGCCCGCTGCAAGGGGCCACTGCCCACTGACTGCTGCCATGAGCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 72 bp CCAGGCCCTCGCCCACACACTCGTCCTCTGGCCGGTTaGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAA +
Preference number: 3 (lower is better)
Translates to: PGPRPHTRPLAG*QCGAELGAGSE
Trigger: TTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGAGTGTGTGGGCGAGGGCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 72 bp GCAGCAGGCAGAGGGCCCTCTCGGGGCGAAGGGGGCTaGGGCCGAACATCTGGCTGGTTCACATATTCAGGC +
Preference number: 3 (lower is better)
Translates to: AAGRGPSRGEGG*GRTSGWFTYSG
Trigger: GCCTGAATATGTGAACCAGCCAGATGTTCGGCCCCAGCCCCCTTCGCCCCGAGAGGGCCCTCTGCCTGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR CAA 90 bp GCCTCCTCTTCAGAGGGCTCCAGCCCTAGTGTCAGGTCCCCACCGCCACTCCTGACTCGGGCACAGGGCTaGCTGCACTTCTCACACCGC +
Preference number: 3 (lower is better)
Translates to: ASSSEGSSPSVRSPPPLLTRAQG*LHFSHR
Trigger: GCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGT...CAGGAGTGGCGGTGGGGACCTGACACTAGGGCTGGAGCCCTCTGAAGAGGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR CAA 90 bp CCCAGGTACTCTGGGTTCTCTGCCGTAGGTGTCCCTTTGAAGGTGCTGGGTGGAGTGGGCAGTGGCCCCTaGCAGCGGGCACAGCCACCG +
Preference number: 3 (lower is better)
Translates to: PRYSGFSAVGVPLKVLGGVGSGP*QRAQPP
Trigger: CGGTGGCTGTGCCCGCTGCAAGGGGCCACTGCCCAC...TCCACCCAGCACCTTCAAAGGGACACCTACGGCAGAGAACCCAGAGTACCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 72 bp TCGTCCTCTGGCCGGTTGGCAGTGTGGAGCAGAGCTTaGTGCGGGTTCCGAAAGAGCTGGTCCCAGGGCACC +
Preference number: 3 (lower is better)
Translates to: SSSGRLAVWSRA*CGFRKSWSQGT
Trigger: GGTGCCCTGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR-3UTR CAA 90 bp TGGCTGGAGCGGGGCAGTGTTGGAGGCTGGGTCCCCATCAAAGCTCTCCGGCAGTTCAGCGGGTCTCCATaGTCTAGCACGGCCAGGGCA +
Preference number: 3 (lower is better)
Translates to: WLERGSVGGWVPIKALRQFSGSP*SSTARA
Trigger: TGCCCTGGCCGTGCTAGACAATGGAGACCCGCTGAA...CTGCCGGAGAGCTTTGATGGGGACCCAGCCTCCAACACTGCCCCGCTCCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR CAA 90 bp AGTCCACTGCCCAGTTCCCTCAGTGAGCGCAGCCCCAGCCAGCTGATGCCCAGCCTCTGCTGTCACCTCTaGGTTGTGCAGGGGGCAGAC +
Preference number: 3 (lower is better)
Translates to: SPLPSSLSERSPSQLMPSLCCHL*VVQGAD
Trigger: GTCTGCCCCCTGCACAACCAAGAGGTGACAGCAGAG...GCTGGGCATCAGCTGGCTGGGGCTGCGCTCACTGAGGGAACTGGGCAGTGGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR TCA 72 bp TTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTaGTGCCAGCAGAAGTCAGGCCTTCCCTGCTCCCTG +
Preference number: 3 (lower is better)
Translates to: FPWKWSEGPPTS*CQQKSGLPCSL
Trigger: CAGGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
3UTR CCA 72 bp AGCTGGTCCCAGGGCACCGTGTGCACGAAGCAGAGGTaGGTGTTATGGTGGATGAGGGCCAGTCCACTGCCC +
Preference number: 3 (lower is better)
Translates to: SWSQGTVCTKQR*VLWWMRASPLP
Trigger: GGGCAGTGGACTGGCCCTCATCCACCATAACACCCACCTCTGCTTCGTGCACACGGTGCCCTGGGACCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR CCA 72 bp GTGTGGAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCTaGTCCCAGGGCACCGTGTGCACGAAGCAGAGGTGG +
Preference number: 3 (lower is better)
Translates to: VWSRAWCGFRKS*SQGTVCTKQRW
Trigger: CCACCTCTGCTTCGTGCACACGGTGCCCTGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR CCA 72 bp TCGCCCACACACTCGTCCTCTGGCCGGTTGGCAGTGTaGAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCTGG +
Preference number: 3 (lower is better)
Translates to: SPTHSSSGRLAV*SRAWCGFRKSW
Trigger: CCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGAGTGTGTGGGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR CCA 72 bp TGTGAGGCTTCGAAGCTGCAGCTCCCGCAGGCCTCCTaGGGAGGCCCCTGTGACAGGGGTGGTATTGTTCAG +
Preference number: 3 (lower is better)
Translates to: CEASKLQLPQAS*GGPCDRGGIVQ
Trigger: CTGAACAATACCACCCCTGTCACAGGGGCCTCCCCAGGAGGCCTGCGGGAGCTGCAGCTTCGAAGCCTCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 72 bp CTCAGCTCCGTCTCTTTCAGGATCCGCATCTGCGCCTaGTTGGGCATCGCTCCGCTAGGTGTCAGCGGCTCC +
Preference number: 3 (lower is better)
Translates to: LSSVSFRIRICA*LGIAPLGVSGS
Trigger: GGAGCCGCTGACACCTAGCGGAGCGATGCCCAACCAGGCGCAGATGCGGATCCTGAAAGAGACGGAGCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 72 bp AAATACATCGGAGCCAGCCCCTTCGGAGGGTGCCAGTaGAGACCTGGGGGCCTCCTCTTCAGAGGGCTCCAG +
Preference number: 3 (lower is better)
Translates to: KYIGASPFGGCQ*RPGGLLFRGLQ
Trigger: CTGGAGCCCTCTGAAGAGGAGGCCCCCAGGTCTCCACTGGCACCCTCCGAAGGGGCTGGCTCCGATGTATTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR CAA 90 bp CCGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCTGGTCCCAACTCGGGCACAGGGCTaGCTGCACTTCTCACACCGC +
Preference number: 3 (lower is better)
Translates to: PVGSVEQSLVRVPKELVPTRAQG*LHFSHR
Trigger: GCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGT...TGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR-3UTR CAA 90 bp TGCCCAGACCATAGCACACTCGGGCACAGGGCTTGCTGCACTTCTCACACCGCTGCTGATGCCCAGCCCTaGCAGGGTCAGCGAGTAGGC +
Preference number: 3 (lower is better)
Translates to: CPDHSTLGHRACCTSHTAADAQP*QGQRVG
Trigger: GCCTACTCGCTGACCCTGCAAGGGCTGGGCATCAGC...AGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGTGTGCTATGGTCTGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR-3UTR CAA 90 bp GACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGGCCCTCCCACCTCTaGATGCCAGCAGAAGTCAGG +
Preference number: 3 (lower is better)
Translates to: DSPVLFLFQRGWTPSSHLGPSHL*MPAEVR
Trigger: CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCC...CAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
3UTR TCA 72 bp AGACCACGACCAGCAGAATGCCAACCACCGCAGAGATaGTGGACGTCAGAGGGCTGGCTCTCTGCTCGGCGG +
Preference number: 3 (lower is better)
Translates to: RPRPAECQPPQR*WTSEGWLSARR
Trigger: CCGCCGAGCAGAGAGCCAGCCCTCTGACGTCCATCATCTCTGCGGTGGTTGGCATTCTGCTGGTCGTGGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR GCA 72 bp GCTGTGTCACCAGCTGCACCGTGGATGTCAGGCAGATaGCCAGAAGGCGGGAGACATATGGGGAGCCCACAC +
Preference number: 3 (lower is better)
Translates to: AVSPAAPWMSGR*PEGGRHMGSPH
Trigger: GTGTGGGCTCCCCATATGTCTCCCGCCTTCTGGGCATCTGCCTGACATCCACGGTGCAGCTGGTGACACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR GCA 72 bp ACCATCAAATACATCGGAGCCAGCCCCTTCGGAGGGTaGCAGTGGAGACCTGGGGGCCTCCTCTTCAGAGGG +
Preference number: 3 (lower is better)
Translates to: TIKYIGASPFGG*QWRPGGLLFRG
Trigger: CCCTCTGAAGAGGAGGCCCCCAGGTCTCCACTGGCACCCTCCGAAGGGGCTGGCTCCGATGTATTTGATGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 72 bp ACACTTGGAGCTGCTCTGGCTGGAGCGGGGCAGTGTTaGAGGCTGGGTCCCCATCAAAGCTCTCCGGCAGAA +
Preference number: 3 (lower is better)
Translates to: TLGAALAGAGQC*RLGPHQSSPAE
Trigger: TTCTGCCGGAGAGCTTTGATGGGGACCCAGCCTCCAACACTGCCCCGCTCCAGCCAGAGCAGCTCCAAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR CCA 72 bp GAGCTGGGTGCCTCGCACAATCCGCAGCCTCTGCAGTaGGACCTGCCTCACTTGGTTGTGAGCGATGAGCAC +
Preference number: 3 (lower is better)
Translates to: ELGASHNPQPLQ*DLPHLVVSDEH
Trigger: GTGCTCATCGCTCACAACCAAGTGAGGCAGGTCCCACTGCAGAGGCTGCGGATTGTGCGAGGCACCCAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR CAA 90 bp CAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCAGGGCCCTCCCACCTCTaGATGCCAGCAGAAGTCAGG +
Preference number: 3 (lower is better)
Translates to: QRLPSAVPLPTRLDPFQPGPSHL*MPAEVR
Trigger: CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCC...TGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
3UTR TCA 72 bp CACACACTGGTCAGCCTCCGGTCCAAAACAGGTCACTaGGCCATTCTGGGGCTGACACTCAGGGTGGCACGG +
Preference number: 3 (lower is better)
Translates to: HTLVSLRSKTGH*AILGLTLRVAR
Trigger: CCGTGCCACCCTGAGTGTCAGCCCCAGAATGGCTCAGTGACCTGTTTTGGACCGGAGGCTGACCAGTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR TCA 72 bp ATCCACCAGGTCCCCCATGTCATCGTCCTCCAGCAGTaGGCGGTAGAAGGTGCTGTCCAAGGGACTGGCTGG +
Preference number: 3 (lower is better)
Translates to: IHQVPHVIVLQQ*AVEGAVQGTGW
Trigger: CCAGCCAGTCCCTTGGACAGCACCTTCTACCGCTCACTGCTGGAGGACGATGACATGGGGGACCTGGTGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR GCA 72 bp ACCTTCCTCAGCTCCGTCTCTTTCAGGATCCGCATCTaGGCCTGGTTGGGCATCGCTCCGCTAGGTGTCAGC +
Preference number: 3 (lower is better)
Translates to: TFLSSVSFRIRI*AWLGIAPLGVS
Trigger: GCTGACACCTAGCGGAGCGATGCCCAACCAGGCGCAGATGCGGATCCTGAAAGAGACGGAGCTGAGGAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR GCA 72 bp CACTGGCACGTCCAGACCCAGGTACTCTGGGTTCTCTaGCGTAGGTGTCCCTTTGAAGGTGCTGGGTGGAGC +
Preference number: 3 (lower is better)
Translates to: HWHVQTQVLWVL*RRCPFEGAGWS
Trigger: GCTCCACCCAGCACCTTCAAAGGGACACCTACGGCAGAGAACCCAGAGTACCTGGGTCTGGACGTGCCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
3UTR CCA 72 bp GATCTCTTCCAGAGTCTCAAACACTTGGAGCTGCTCTaGCTGGAGCGGGGCAGTGTTGGAGGCTGGGTCCCC +
Preference number: 3 (lower is better)
Translates to: DLFQSLKHLELL*LERGSVGGWVP
Trigger: GGGGACCCAGCCTCCAACACTGCCCCGCTCCAGCCAGAGCAGCTCCAAGTGTTTGAGACTCTGGAAGAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR CCA 72 bp GGCACCGTGTGCACGAAGCAGAGGTGGGTGTTATGGTaGATGAGGGCCAGTCCACTGCCCAGTTCCCTCAGT +
Preference number: 3 (lower is better)
Translates to: GTVCTKQRWVLW*MRASPLPSSLS
Trigger: ACTGAGGGAACTGGGCAGTGGACTGGCCCTCATCCACCATAACACCCACCTCTGCTTCGTGCACACGGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR CCA 72 bp AGATGGGCATGTAGGAGAGGTCAGGTTTCACACCGCTaGGGCAGCGGGCCACGCAGAAGGGAGGGTCCTTAT +
Preference number: 3 (lower is better)
Translates to: RWACRRGQVSHR*GSGPRRREGPY
Trigger: ATAAGGACCCTCCCTTCTGCGTGGCCCGCTGCCCCAGCGGTGTGAAACCTGACCTCTCCTACATGCCCATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 72 bp GGGCCCAAGTCCTCATTCTGGATGACCACAAAGCGCTaGGGGTCCCTGGCCATGCGGGAGAATTCAGACACC +
Preference number: 3 (lower is better)
Translates to: GPKSSFWMTTKR*GSLAMRENSDT
Trigger: GGTGTCTGAATTCTCCCGCATGGCCAGGGACCCCCAGCGCTTTGTGGTCATCCAGAATGAGGACTTGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 72 bp CAACGTAGCCATCAGTCTCAGAGGGCAGGGGTACTGTaGGGTCCTCACTGTACCGCTGTAGAGGGCTGGGGT +
Preference number: 3 (lower is better)
Translates to: QRSHQSQRAGVL*GPHCTAVEGWG
Trigger: ACCCCAGCCCTCTACAGCGGTACAGTGAGGACCCCACAGTACCCCTGCCCTCTGAGACTGATGGCTACGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR CAA 90 bp CATCGGAGAACAGGGGTGGCAGGCCCGAGAGCGGTTGGTGTCTATCAGTGTGAGTGGGACCTGCCTCACTaGGTTGTGAGCGATGAGCAC +
Preference number: 3 (lower is better)
Translates to: HRRTGVAGPRAVGVYQCEWDLPH*VVSDEH
Trigger: GTGCTCATCGCTCACAACCAAGTGAGGCAGGTCCCA...CTCACACTGATAGACACCAACCGCTCTCGGGCCTGCCACCCCTGTTCTCCGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR CAA 90 bp AGCTTGGTGCGGGTTCCGAAAGAGCTGGTCCCAGGGCACCGTGTGCACGAAGCAGTGACAGGGGTGGTATaGTTCAGCGGGTCTCCATTG +
Preference number: 3 (lower is better)
Translates to: SLVRVPKELVPGHRVHEAVTGVV*FSGSPL
Trigger: CAATGGAGACCCGCTGAACAATACCACCCCTGTCAC...TGCTTCGTGCACACGGTGCCCTGGGACCAGCTCTTTCGGAACCCGCACCAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR TCA 72 bp CTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCCCTaGGGACACATCAGGGCTTCTGCGGACTTGGCCTTC +
Preference number: 3 (lower is better)
Translates to: LDASRSQAFPAP*GHIRASADLAF
Trigger: GAAGGCCAAGTCCGCAGAAGCCCTGATGTGTCCTCAGGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
3UTR TCA 72 bp TCCGGTCCAAAACAGGTCACTGAGCCATTCTGGGGCTaGCACTCAGGGTGGCACGGCAAACAGTGCCTGGCA +
Preference number: 3 (lower is better)
Translates to: SGPKQVTEPFWG*HSGWHGKQCLA
Trigger: TGCCAGGCACTGTTTGCCGTGCCACCCTGAGTGTCAGCCCCAGAATGGCTCAGTGACCTGTTTTGGACCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR GCA 72 bp TGCCCAGACCATAGCACACTCGGGCACAGGGCTTGCTaGACTTCTCACACCGCTGTGTTCCATCCTCTGCTG +
Preference number: 3 (lower is better)
Translates to: CPDHSTLGHRAC*TSHTAVFHPLL
Trigger: CAGCAGAGGATGGAACACAGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGTGTGCTATGGTCTGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR GCA 72 bp CCATGCCCAGACCATAGCACACTCGGGCACAGGGCTTaGTGCACTTCTCACACCGCTGTGTTCCATCCTCTG +
Preference number: 3 (lower is better)
Translates to: PCPDHSTLGHRA*CTSHTAVFHPL
Trigger: CAGAGGATGGAACACAGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGTGTGCTATGGTCTGGGCATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR CCA 72 bp TCTTCCAGAGTCTCAAACACTTGGAGCTGCTCTGGCTaGAGCGGGGCAGTGTTGGAGGCTGGGTCCCCATCA +
Preference number: 3 (lower is better)
Translates to: SSRVSNTWSCSG*SGAVLEAGSPS
Trigger: TGATGGGGACCCAGCCTCCAACACTGCCCCGCTCCAGCCAGAGCAGCTCCAAGTGTTTGAGACTCTGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR CCA 72 bp GCCATCCACTTGATGGGCACCTTGCCCCCATCTGCATaGTACTCTGTCTCGTCAATGTCCAGCAGCCGAGCC +
Preference number: 3 (lower is better)
Translates to: AIHLMGTLPPSA*YSVSSMSSSRA
Trigger: GGCTCGGCTGCTGGACATTGACGAGACAGAGTACCATGCAGATGGGGGCAAGGTGCCCATCAAGTGGATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 72 bp TCAGGGCTTCTGCGGACTTGGCCTTCTGGTTCACACTaGCACGTCCAGACCCAGGTACTCTGGGTTCTCTGC +
Preference number: 3 (lower is better)
Translates to: SGLLRTWPSGSH*HVQTQVLWVLC
Trigger: GCAGAGAACCCAGAGTACCTGGGTCTGGACGTGCCAGTGTGAACCAGAAGGCCAAGTCCGCAGAAGCCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR CAA 90 bp CCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTGGGCCCTCCCACCTCTaGATGCCAGCAGAAGTCAGG +
Preference number: 3 (lower is better)
Translates to: PRVSLGRASESTKTPQCCGPSHL*MPAEVR
Trigger: CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCC...ACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
3UTR-3UTR CAA 90 bp AGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCGGGCCCTCCCACCTCTaGATGCCAGCAGAAGTCAGG +
Preference number: 3 (lower is better)
Translates to: SLIGQGLRIHKDSPVLFLGPSHL*MPAEVR
Trigger: CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCC...GAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
3UTR-3UTR CAA 90 bp TGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCTGGTCCCAGGGCACTCCCAAAGATCTTCTaGCAGCCAGCAAACTCCTGG +
Preference number: 3 (lower is better)
Translates to: WQCGAELGAGSERAGPRALPKIF*QPANSW
Trigger: CCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAG...TGCCCTGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR-3UTR CAA 90 bp AGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTCCAGCGCCATCCACTaGATGGGCACCTTGCCCCCA +
Preference number: 3 (lower is better)
Translates to: SLIGQGLRIHKDSPVLFLSSAIH*MGTLPP
Trigger: TGGGGGCAAGGTGCCCATCAAGTGGATGGCGCTGGA...GAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR CAA 90 bp AGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCAGGAACTGGCTGCAGTaGACACACTGGGTGGGCCCT +
Preference number: 3 (lower is better)
Translates to: SLIGQGLRIHKDSPVLFLRNWLQ*THWVGP
Trigger: AGGGCCCACCCAGTGTGTCAACTGCAGCCAGTTCCT...GAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR TCA 72 bp TTCGTCCCCGGATTACTTGCAGGTTCTGGAAGACGCTaGGGTCAGGCAGGCTGTCCGGCCATGCTGAGATGT +
Preference number: 3 (lower is better)
Translates to: FVPGLLAGSGRR*GQAGCPAMLRC
Trigger: ACATCTCAGCATGGCCGGACAGCCTGCCTGACCTCAGCGTCTTCCAGAACCTGCAAGTAATCCGGGGACGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR GCA 72 bp TTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTaGTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCA +
Preference number: 3 (lower is better)
Translates to: LGRASESTKTPQ*CSSSNEAGPLP
Trigger: TGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
3UTR GCA 72 bp AGCAGTCTCCGCATCGTGTACTTCCGGATCTTCTGCTaGCGTCGCTTGATGAGGATCCCAAAGACCACCCCC +
Preference number: 3 (lower is better)
Translates to: SSLRIVYFRIFC*RRLMRIPKTTP
Trigger: GGGGGTGGTCTTTGGGATCCTCATCAAGCGACGGCAGCAGAAGATCCGGAAGTACACGATGCGGAGACTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 72 bp CTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTaGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGT +
Preference number: 3 (lower is better)
Translates to: LGCGIHWTLESH*AGPQNPQRLPS
Trigger: ACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
3UTR CCA 72 bp TGGAAGGAAAGGGCCAAGCTGGGCTGTGGCATCCACTaGACCCTAGAGTCTCATTGGGCAGGGCCTCAGAAT +
Preference number: 3 (lower is better)
Translates to: WKERAKLGCGIH*TLESHWAGPQN
Trigger: ATTCTGAGGCCCTGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
3UTR CCA 72 bp AGGCCAGCTTCCCTAAGGCTTTCAGTACCCAGGATCTaGAAGGAAAGGGCCAAGCTGGGCTGTGGCATCCAC +
Preference number: 3 (lower is better)
Translates to: RPASLRLSVPRI*KERAKLGCGIH
Trigger: GTGGATGCCACAGCCCAGCTTGGCCCTTTCCTTCCAGATCCTGGGTACTGAAAGCCTTAGGGAAGCTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
3UTR CCA 72 bp GTTGATGGGGCAAGGCTGGCATGCGCCCTCCTCATCTaGAAACTTCCAGATGGGCATGTAGGAGAGGTCAGG +
Preference number: 3 (lower is better)
Translates to: VDGARLACALLI*KLPDGHVGEVR
Trigger: CCTGACCTCTCCTACATGCCCATCTGGAAGTTTCCAGATGAGGAGGGCGCATGCCAGCCTTGCCCCATCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 72 bp TCCACACAGGAGTGGGTGCAGTTGATGGGGCAAGGCTaGCATGCGCCCTCCTCATCTGGAAACTTCCAGATG +
Preference number: 3 (lower is better)
Translates to: STQEWVQLMGQG*HAPSSSGNFQM
Trigger: CATCTGGAAGTTTCCAGATGAGGAGGGCGCATGCCAGCCTTGCCCCATCAACTGCACCCACTCCTGTGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 72 bp AGCAGCCGAGCCAGCCCGAAGTCTGTAATTTTGACATaGTTGGGACTCTTGACCAGCACGTTCCGAGCGGCC +
Preference number: 3 (lower is better)
Translates to: SSRASPKSVILT*LGLLTSTFRAA
Trigger: GGCCGCTCGGAACGTGCTGGTCAAGAGTCCCAACCATGTCAAAATTACAGACTTCGGGCTGGCTCGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 72 bp CAGGGATCTCCCGGGCTGGGATCCCATCGTAAGGTTTaGCCCCAAAAGTCATCAGCTCCCACACAGTCACAC +
Preference number: 3 (lower is better)
Translates to: QGSPGLGSHRKV*PQKSSAPTQSH
Trigger: GTGTGACTGTGTGGGAGCTGATGACTTTTGGGGCCAAACCTTACGATGGGATCCCAGCCCGGGAGATCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR TCA 72 bp TCTGCAGTGGGACCTGCCTCACTTGGTTGTGAGCGATaGGCACGTAGCCCTGCACCTCCTGGATATCCTGTA +
Preference number: 3 (lower is better)
Translates to: SAVGPASLGCER*ARSPAPPGYPV
Trigger: TACAGGATATCCAGGAGGTGCAGGGCTACGTGCTCATCGCTCACAACCAAGTGAGGCAGGTCCCACTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR TCA 72 bp GGTGGCAGGCCCGAGAGCGGTTGGTGTCTATCAGTGTaGGAGCCAGCTGGTTGTTCTTGTGGAAGATGTCCT +
Preference number: 3 (lower is better)
Translates to: GGRPESGWCLSV*EPAGCSCGRCP
Trigger: AGGACATCTTCCACAAGAACAACCAGCTGGCTCTCACACTGATAGACACCAACCGCTCTCGGGCCTGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR GCA 72 bp GGAGGCTGGGTCCCCATCAAAGCTCTCCGGCAGAAATaGCAGGCTCCCAAAGATCTTCTTGCAGCCAGCAAA +
Preference number: 3 (lower is better)
Translates to: GGWVPIKALRQK*QAPKDLLAASK
Trigger: TTTGCTGGCTGCAAGAAGATCTTTGGGAGCCTGGCATTTCTGCCGGAGAGCTTTGATGGGGACCCAGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR GCA 72 bp TGCAGCAGTCTCCGCATCGTGTACTTCCGGATCTTCTaGTGCCGTCGCTTGATGAGGATCCCAAAGACCACC +
Preference number: 3 (lower is better)
Translates to: CSSLRIVYFRIF*CRRLMRIPKTT
Trigger: GGTGGTCTTTGGGATCCTCATCAAGCGACGGCAGCAGAAGATCCGGAAGTACACGATGCGGAGACTGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 72 bp TTGTGCAGAATTCGTCCCCGGATTACTTGCAGGTTCTaGAAGACGCTGAGGTCAGGCAGGCTGTCCGGCCAT +
Preference number: 3 (lower is better)
Translates to: LCRIRPRITCRF*KTLRSGRLSGH
Trigger: ATGGCCGGACAGCCTGCCTGACCTCAGCGTCTTCCAGAACCTGCAAGTAATCCGGGGACGAATTCTGCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR CCA 72 bp TCTGGTTCACACTGGCACGTCCAGACCCAGGTACTCTaGGTTCTCTGCCGTAGGTGTCCCTTTGAAGGTGCT +
Preference number: 3 (lower is better)
Translates to: SGSHWHVQTQVL*VLCRRCPFEGA
Trigger: AGCACCTTCAAAGGGACACCTACGGCAGAGAACCCAGAGTACCTGGGTCTGGACGTGCCAGTGTGAACCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 72 bp AGGCTCCCAAAGATCTTCTTGCAGCCAGCAAACTCCTaGATATTGGCACTGGTAACTGCCCTCACCTCTCGC +
Preference number: 3 (lower is better)
Translates to: RLPKIFLQPANS*ILALVTALTSR
Trigger: GCGAGAGGTGAGGGCAGTTACCAGTGCCAATATCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR CCA 72 bp AAAGGCAAAAACGTCTTTGACGACCCCATTCTTCCCTaGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACC +
Preference number: 3 (lower is better)
Translates to: KGKNVFDDPILP*GESLGPFQSGT
Trigger: GGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGGGTCGTCAAAGACGTTTTTGCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
3UTR-3UTR CAA 90 bp GTCACCATCAAATACATCGGAGCCAGCCCCTTCGGAGGGTGCCAGTGGAGACCTCTGAATGGGTCGCTTTaGTTCTTAGACACTCCCTTA +
Preference number: 3 (lower is better)
Translates to: VTIKYIGASPFGGCQWRPLNGSL*FLDTPL
Trigger: TAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAG...AGGTCTCCACTGGCACCCTCCGAAGGGGCTGGCTCCGATGTATTTGATGGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR-3UTR CAA 90 bp GGTTCACACTGGCACGTCCAGACCCAGGTACTCTGGGTTCTCTGCCGTAGGTGTTTTTCCCTCAACACTTaGATGGCCACTGGAATTTTC +
Preference number: 3 (lower is better)
Translates to: GSHWHVQTQVLWVLCRRCFSLNT*MATGIF
Trigger: GAAAATTCCAGTGGCCATCAAAGTGTTGAGGGAAAA...ACACCTACGGCAGAGAACCCAGAGTACCTGGGTCTGGACGTGCCAGTGTGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 72 bp CGAGAGCGGTTGGTGTCTATCAGTGTGAGAGCCAGCTaGTTGTTCTTGTGGAAGATGTCCTTCCACAAAATC +
Preference number: 3 (lower is better)
Translates to: RERLVSISVRAS*LFLWKMSFHKI
Trigger: GATTTTGTGGAAGGACATCTTCCACAAGAACAACCAGCTGGCTCTCACACTGATAGACACCAACCGCTCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CCA 72 bp CATGCGGGAGAATTCAGACACCAACTCCCGGAATCTTaGCCGACATTCAGAGTCAATCATCCAACATTTGAC +
Preference number: 3 (lower is better)
Translates to: HAGEFRHQLPES*PTFRVNHPTFD
Trigger: GTCAAATGTTGGATGATTGACTCTGAATGTCGGCCAAGATTCCGGGAGTTGGTGTCTGAATTCTCCCGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR GCA 90 bp CCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCTGGGCAGTGGCCCCTTaGAGCGGGCACAGCCACCGG +
Preference number: 4 (lower is better)
Translates to: PWGESLGPFQSGTSRSGSWAVAP*SGHSHR
Trigger: CCGGTGGCTGTGCCCGCTGCAAGGGGCCACTGCCCA...GCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp CGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCCCGTGCCGGTGCACACTTaGGTGCTCGCGGCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: RRALPPLDASRSQAFPAPVPVHT*VLAAPG
Trigger: CCCCGGAGCCGCGAGCACCCAAGTGTGCACCGGCAC...GGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269571.10
ENST00000578373.5
CDS-3UTR CCA 90 bp GGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCCTCGGGCGCACAGCTaGTGGCAGGCCAGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: GRRALPPLDASRSQAFPAPRAHS*WQARPS
Trigger: CGAGGGCCTGGCCTGCCACCAGCTGTGCGCCCGAGG...AGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGTGGGCAGTGGCCCCTTaGAGCGGGCACAGCCACCGG +
Preference number: 4 (lower is better)
Translates to: PLEVVGGPSHLLMPAEVRWAVAP*SGHSHR
Trigger: CCGGTGGCTGTGCCCGCTGCAAGGGGCCACTGCCCA...CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp ATGGCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCTGGGCAGTGGCCCCTTaGAGCGGGCACAGCCACCGG +
Preference number: 4 (lower is better)
Translates to: MAGSPGSGRRALPPLDASWAVAP*SGHSHR
Trigger: CCGGTGGCTGTGCCCGCTGCAAGGGGCCACTGCCCA...GCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCACCTGGACCCCAGCAGTaGCCTCGGGCGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: GRESWAFPEWHQQVGQQAPGPQQ*PRAHSW
Trigger: CCAGCTGTGCGCCCGAGGGCACTGCTGGGGTCCAGG...TGCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp CGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCCCAGAGGGCTGGCTCTCTaGTCGGCGGGGCAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: RRALPPLDASRSQAFPAPRGLAL*SAGQPL
Trigger: CAAGGGCTGCCCCGCCGAGCAGAGAGCCAGCCCTCT...GGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCAGCCCCTTCGGAGGGTaGCAGTGGAGACCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: GERVLGLSRVAPAGRAAGSPFGG*QWRPGG
Trigger: GCCCCCAGGTCTCCACTGGCACCCTCCGAAGGGGCT...GCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp ATGGCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCCTCCCGCAGGCCTCCTaGGGAGGCCCCTGTGACAGG +
Preference number: 4 (lower is better)
Translates to: MAGSPGSGRRALPPLDASLPQAS*GGPCDR
Trigger: CCTGTCACAGGGGCCTCCCCAGGAGGCCTGCGGGAG...GCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCCTCCCGCAGGCCTCCTaGGGAGGCCCCTGTGACAGG +
Preference number: 4 (lower is better)
Translates to: PGSGRRALPPLDASRSQALPQAS*GGPCDR
Trigger: CCTGTCACAGGGGCCTCCCCAGGAGGCCTGCGGGAG...GGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp ACACTCGTCCTCTGGCCGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGCTCCCGCAGGCCTCCTaGGGAGGCCCCTGTGACAGG +
Preference number: 4 (lower is better)
Translates to: TLVLWPVGSVEQSLVRVPLPQAS*GGPCDR
Trigger: CCTGTCACAGGGGCCTCCCCAGGAGGCCTGCGGGAG...CGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGAGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp CCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCACTCCCGCAGGCCTCCTaGGGAGGCCCCTGTGACAGG +
Preference number: 4 (lower is better)
Translates to: PGERVLGLSRVAPAGRAALPQAS*GGPCDR
Trigger: CCTGTCACAGGGGCCTCCCCAGGAGGCCTGCGGGAG...TGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp TGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCTGCGGTGCCTGTGGTaGACCATGCCCCCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: WGESLGPFQSGTSRSGSRLRCLW*TMPPAP
Trigger: GGGCGCTGGGGGCATGGTCCACCACAGGCACCGCAG...CCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp GGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCGGGGCGAAGGGGGCTaGGGCCGAACATCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GRRALPPLDASRSQAFPARGEGG*GRTSGW
Trigger: CCAGCCAGATGTTCGGCCCCAGCCCCCTTCGCCCCG...AGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCGGGGCGAAGGGGGCTaGGGCCGAACATCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SLGRESWAFPEWHQQVGQRGEGG*GRTSGW
Trigger: CCAGCCAGATGTTCGGCCCCAGCCCCCTTCGCCCCG...CTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
3UTR CAA 72 bp GCCAGGCCCTCGCCCACACACTCGTCCTCTGGCCGGTaGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGA +
Preference number: 4 (lower is better)
Translates to: ARPSPTHSSSGR*AVWSRAWCGFR
Trigger: TCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGAGTGTGTGGGCGAGGGCCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR TCA 90 bp GGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCTCCCAGGGCGACCGTaGGCCGGTGTACCGCGACTG +
Preference number: 4 (lower is better)
Translates to: GSPGSGRRALPPLDASRSLPGRP*AGVPRL
Trigger: CAGTCGCGGTACACCGGCTCACGGTCGCCCTGGGAG...ACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584601.5
CDS-3UTR GCA 90 bp CCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCGCCAGGCAGTCAGAGTaGTTGGGGCCCGTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: PGSGRRALPPLDASRSQAARQSE*LGPVQP
Trigger: CGGCTGCACGGGCCCCAAGCACTCTGACTGCCTGGC...GGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAAGGCCGCCAGCTCCATaGTGCTCACTGCGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: PGERVLGLSRVAPAGRAARPPAP*CSLRLR
Trigger: CCGGAGCCGCAGTGAGCACCATGGAGCTGGCGGCCT...TGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp GCCTCCTCTTCAGAGGGCTCCAGCCCTAGTGTCAGGTCCCCACCGCCACTCCTGGGTGGGTCTCGGGACTaGCAGGGAGCCGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: ASSSEGSSPSVRSPPPLLGGSRD*QGAAAS
Trigger: TGAAGCTGCGGCTCCCTGCCAGTCCCGAGACCCACC...CAGGAGTGGCGGTGGGGACCTGACACTAGGGCTGGAGCCCTCTGAAGAGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp CTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGCTCCCGCAGGCCTCCTaGGGAGGCCCCTGTGACAGG +
Preference number: 4 (lower is better)
Translates to: LPSAVPLPTRLDPFQPSGLPQAS*GGPCDR
Trigger: CCTGTCACAGGGGCCTCCCCAGGAGGCCTGCGGGAG...CCCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCGGCAGTCAGAGTGCTTaGGGCCCGTGCAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: PGSGRRALPPLDASRSQAGSQSA*GPCSRQ
Trigger: CTGCCGGCTGCACGGGCCCCAAGCACTCTGACTGCC...GGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCAGGGCCGGCAGTCAGAGTGCTTaGGGCCCGTGCAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: GQAGLWHPLDPRVSLGRAGSQSA*GPCSRQ
Trigger: CTGCCGGCTGCACGGGCCCCAAGCACTCTGACTGCC...GGCCCTGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGCCTCGGGCGCACAGCTaGTGGCAGGCCAGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: FFPGERVLGLSRVAPAGRPRAHS*WQARPS
Trigger: CGAGGGCCTGGCCTGCCACCAGCTGTGCGCCCGAGG...CCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp CCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCCAGGTTTCACACCGCTaGGGCAGCGGGCCACGCAGA +
Preference number: 4 (lower is better)
Translates to: PWGESLGPFQSGTSRSGSQVSHR*GSGPRR
Trigger: TCTGCGTGGCCCGCTGCCCCAGCGGTGTGAAACCTG...GCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCGGTGCCTGTGGTaGACCATGCCCCCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSLRCLW*TMPPAP
Trigger: GGGCGCTGGGGGCATGGTCCACCACAGGCACCGCAG...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCGGGGCAGCTCCTCCCTaGGGTGTCAAGTACTCGGGG +
Preference number: 4 (lower is better)
Translates to: GERVLGLSRVAPAGRAAGGAAPP*GVKYSG
Trigger: CCCCGAGTACTTGACACCCCAGGGAGGAGCTGCCCC...GCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp GGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTGTTGGTCCTGCTAGCTaGGGCAGCGGCGCTGGCGAG +
Preference number: 4 (lower is better)
Translates to: GRRALPPLDASRSQAFPAVGPAS*GSGAGE
Trigger: CTCGCCAGCGCCGCTGCCCCAGCTAGCAGGACCAAC...AGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584601.5
3UTR CAA 72 bp TCCACGCACTCCTGGCCCCGAAGGAACTGGCTGCAGTaGACACACTGGGTGGGCCCTGGACCCCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: STHSWPRRNWLQ*THWVGPGPQQC
Trigger: GCACTGCTGGGGTCCAGGGCCCACCCAGTGTGTCAACTGCAGCCAGTTCCTTCGGGGCCAGGAGTGCGTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR TCA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCGCCCAGTTCCCTCAGTaGGCGCAGCCCCAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSAQFPQ*AQPQPA
Trigger: AGCTGGCTGGGGCTGCGCTCACTGAGGGAACTGGGC...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp TCTGGCCGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCTGGGCCCAGTTCCCTCAGTaGGCGCAGCCCCAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SGRLAVWSRAWCGFRKSWAQFPQ*AQPQPA
Trigger: AGCTGGCTGGGGCTGCGCTCACTGAGGGAACTGGGC...CCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR TCA 90 bp CCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCGGAACTGGCTGCAGTTaGCACACTGGGTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PWGESLGPFQSGTSRSGSGTGCS*HTGWAL
Trigger: CAGGGCCCACCCAGTGTGTCAACTGCAGCCAGTTCC...GCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR TCA 90 bp GGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCAGGGCCGAGCCATTCTGGGGCTaGCACTCAGGGTGGCACGGC +
Preference number: 4 (lower is better)
Translates to: GQAGLWHPLDPRVSLGRAEPFWG*HSGWHG
Trigger: GCCGTGCCACCCTGAGTGTCAGCCCCAGAATGGCTC...GGCCCTGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp GGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCAGAGCCATTCTGGGGCTaGCACTCAGGGTGGCACGGC +
Preference number: 4 (lower is better)
Translates to: GRESWAFPEWHQQVGQQAEPFWG*HSGWHG
Trigger: GCCGTGCCACCCTGAGTGTCAGCCCCAGAATGGCTC...TGCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR TCA 90 bp TGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGGAGCCATTCTGGGGCTaGCACTCAGGGTGGCACGGC +
Preference number: 4 (lower is better)
Translates to: WGESLGPFQSGTSRSGSREPFWG*HSGWHG
Trigger: GCCGTGCCACCCTGAGTGTCAGCCCCAGAATGGCTC...CCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR TCA 90 bp ATGGCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCGAGCCATTCTGGGGCTaGCACTCAGGGTGGCACGGC +
Preference number: 4 (lower is better)
Translates to: MAGSPGSGRRALPPLDASEPFWG*HSGWHG
Trigger: GCCGTGCCACCCTGAGTGTCAGCCCCAGAATGGCTC...GCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGTGGGCAGTGGCCCCTTaGAGCGGGCACAGCCACCGG +
Preference number: 4 (lower is better)
Translates to: DSPVLFLFQRGWTPSSHLWAVAP*SGHSHR
Trigger: CCGGTGGCTGTGCCCGCTGCAAGGGGCCACTGCCCA...CAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGAGTGCTTGGGGCCCGTaGAGCCGGCAGCACACTGCT +
Preference number: 4 (lower is better)
Translates to: PLEVVGGPSHLLMPAEVRSAWGP*SRQHTA
Trigger: AGCAGTGTGCTGCCGGCTGCACGGGCCCCAAGCACT...CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GCAGAGCTTGGTGCGGGTTCCGAAAGAGCTGGTCCCAGGGCACCGTGTGCACGAAGTGCTTGGGGCCCGTaGAGCCGGCAGCACACTGCT +
Preference number: 4 (lower is better)
Translates to: AELGAGSERAGPRAPCARSAWGP*SRQHTA
Trigger: AGCAGTGTGCTGCCGGCTGCACGGGCCCCAAGCACT...TCGTGCACACGGTGCCCTGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR GCA 90 bp GGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCGCCAGGCAGTCAGAGTaGTTGGGGCCCGTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: GSGRRALPPLDASRSQAFARQSE*LGPVQP
Trigger: CGGCTGCACGGGCCCCAAGCACTCTGACTGCCTGGC...GAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCTCCCAGGGCACCGTGTaGACGAAGCAGAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PWGESLGPFQSGTSRSGSSQGTV*TKQRWV
Trigger: CACCCACCTCTGCTTCGTGCACACGGTGCCCTGGGA...GCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp TGGGACCTGCCTCACTTGGTTGTGAGCGATGAGCACGTAGCCCTGCACCTCCTGCCTGGACCCCAGCAGTaGCCTCGGGCGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: WDLPHLVVSDEHVALHLLPGPQQ*PRAHSW
Trigger: CCAGCTGTGCGCCCGAGGGCACTGCTGGGGTCCAGG...CAGGAGGTGCAGGGCTACGTGCTCATCGCTCACAACCAAGTGAGGCAGGTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp TCCTCTGGCCGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCAGGCCGCCAGCTCCATaGTGCTCACTGCGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: SSGRLAVWSRAWCGFRKSRPPAP*CSLRLR
Trigger: CCGGAGCCGCAGTGAGCACCATGGAGCTGGCGGCCT...GCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CCA 90 bp ATGGCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCGGTGGGTCTCGGGACTaGCAGGGAGCCGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: MAGSPGSGRRALPPLDASGGSRD*QGAAAS
Trigger: TGAAGCTGCGGCTCCCTGCCAGTCCCGAGACCCACC...GCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGTGGGTCTCGGGACTaGCAGGGAGCCGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: PGERVLGLSRVAPAGRAAGGSRD*QGAAAS
Trigger: TGAAGCTGCGGCTCCCTGCCAGTCCCGAGACCCACC...TGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp GGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCGGGTTCCGAAAGAGCTaGTCCCAGGGCACCGTGTGC +
Preference number: 4 (lower is better)
Translates to: GERVLGLSRVAPAGRAAGGFRKS*SQGTVC
Trigger: GCACACGGTGCCCTGGGACCAGCTCTTTCGGAACCC...GCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp TGCTCTGGCTGGAGCGGGGCAGTGTTGGAGGCTGGGTCCCCATCAAAGCTCTCCGGCCGGTTGGCAGTGTaGAGCAGAGCTTGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: CSGWSGAVLEAGSPSKLSGRLAV*SRAWCG
Trigger: CCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCC...GGAGAGCTTTGATGGGGACCCAGCCTCCAACACTGCCCCGCTCCAGCCAGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CCA 90 bp GAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCACCTCGGGCGCACAGCTaGTGGCAGGCCAGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: ERAKLGCGIHWTLESHWAPRAHS*WQARPS
Trigger: CGAGGGCCTGGCCTGCCACCAGCTGTGCGCCCGAGG...TGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCAGGTTTCACACCGCTaGGGCAGCGGGCCACGCAGA +
Preference number: 4 (lower is better)
Translates to: GRRALPPLDASRSQAFPAQVSHR*GSGPRR
Trigger: TCTGCGTGGCCCGCTGCCCCAGCGGTGTGAAACCTG...AGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCAGGTTTCACACCGCTaGGGCAGCGGGCCACGCAGA +
Preference number: 4 (lower is better)
Translates to: PLEVVGGPSHLLMPAEVRQVSHR*GSGPRR
Trigger: TCTGCGTGGCCCGCTGCCCCAGCGGTGTGAAACCTG...CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCACCGCCGGCGGAGAATaGACTCCAGCGCCATCCACT +
Preference number: 4 (lower is better)
Translates to: PWGESLGPFQSGTSRSGSTAGGE*TPAPST
Trigger: AGTGGATGGCGCTGGAGTCCATTCTCCGCCGGCGGT...GCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp CGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCCCCTCCACACATCACTCTaGTGGGTGAACCGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: RRALPPLDASRSQAFPAPLHTSL*WVNRRR
Trigger: CCGCCGGCGGTTCACCCACCAGAGTGATGTGTGGAG...GGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGCTGCGGTGCCTGTGGTaGACCATGCCCCCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: FFPGERVLGLSRVAPAGRLRCLW*TMPPAP
Trigger: GGGCGCTGGGGGCATGGTCCACCACAGGCACCGCAG...CCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp CTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGGAGCTGCGGTGCCTGTaGTGGACCATGCCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: LPSAVPLPTRLDPFQPSGELRCL*WTMPPA
Trigger: CGCTGGGGGCATGGTCCACCACAGGCACCGCAGCTC...CCCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp AGGGCCGCTTCCCCTCTCAGGCCAGCTTCCCTAAGGCTTTCAGTACCCAGGATCCGGGGCGAAGGGGGCTaGGGCCGAACATCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: RAASPLRPASLRLSVPRIRGEGG*GRTSGW
Trigger: CCAGCCAGATGTTCGGCCCCAGCCCCCTTCGCCCCG...GATCCTGGGTACTGAAAGCCTTAGGGAAGCTGGCCTGAGAGGGGAAGCGGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp GGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCTGGGCCTTTCCAGAGTaGCACCAGCAGGTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: GERVLGLSRVAPAGRAAGWAFPE*HQQVGQ
Trigger: CTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCA...GCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp CCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCGGGGCAGCTCCTCCCTaGGGTGTCAAGTACTCGGGG +
Preference number: 4 (lower is better)
Translates to: PGSGRRALPPLDASRSQAGAAPP*GVKYSG
Trigger: CCCCGAGTACTTGACACCCCAGGGAGGAGCTGCCCC...GGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp ATGGCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCGGGGCAGCTCCTCCCTaGGGTGTCAAGTACTCGGGG +
Preference number: 4 (lower is better)
Translates to: MAGSPGSGRRALPPLDASGAAPP*GVKYSG
Trigger: CCCCGAGTACTTGACACCCCAGGGAGGAGCTGCCCC...GCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
3UTR CAA 72 bp CTCGTCCTCTGGCCGGTTGGCAGTGTGGAGCAGAGCTaGGTGCGGGTTCCGAAAGAGCTGGTCCCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: LVLWPVGSVEQS*VRVPKELVPGH
Trigger: GTGCCCTGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
3UTR CAA 72 bp GTCAGAGGGCTGGCTCTCTGCTCGGCGGGGCAGCCCTaGTCATCCAGGTCCACACAGGAGTGGGTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: VRGLALCSAGQP*SSRSTQEWVQL
Trigger: CAACTGCACCCACTCCTGTGTGGACCTGGATGACAAGGGCTGCCCCGCCGAGCAGAGAGCCAGCCCTCTGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR TCA 90 bp ATGGCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCGGTTCTGGAAGACGCTaGGGTCAGGCAGGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: MAGSPGSGRRALPPLDASGSGRR*GQAGCP
Trigger: CGGACAGCCTGCCTGACCTCAGCGTCTTCCAGAACC...GCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp CCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCGGAACTGGCTGCAGTTaGCACACTGGGTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PGSGRRALPPLDASRSQAGTGCS*HTGWAL
Trigger: CAGGGCCCACCCAGTGTGTCAACTGCAGCCAGTTCC...GGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp GGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCCATGGTTGGGACTCTTaGCCAGCACGTTCCGAGCGG +
Preference number: 4 (lower is better)
Translates to: GERVLGLSRVAPAGRAAGHGWDS*PARSER
Trigger: CCGCTCGGAACGTGCTGGTCAAGAGTCCCAACCATG...GCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR TCA 90 bp GGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCAGGGCCCATCACTCTGGTGGGTaGACCGCCGGCGGAGAATGG +
Preference number: 4 (lower is better)
Translates to: GQAGLWHPLDPRVSLGRAHHSGG*TAGGEW
Trigger: CCATTCTCCGCCGGCGGTTCACCCACCAGAGTGATG...GGCCCTGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp CCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCGCCACTCCTGGTAGATaGGCTGCGGTGCCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: PGSGRRALPPLDASRSQAATPGR*AAVPVV
Trigger: CACCACAGGCACCGCAGCTCATCTACCAGGAGTGGC...GGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCCCAGTTCCAGGTTTCCCTaGACCACCTGGCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RRALPPLDASRSQAFPAPSSRFP*TTWQPW
Trigger: CCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGAACT...GGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCCCTCAAAGAGCTGGGTaGCTCGCACAATCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: GERVLGLSRVAPAGRAAGPQRAG*LAQSAA
Trigger: GGCTGCGGATTGTGCGAGGCACCCAGCTCTTTGAGG...GCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp ATGGCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCGTGAGGCTTCGAAGCTaGAGCTCCCGCAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: MAGSPGSGRRALPPLDASVRLRS*SSRRPP
Trigger: AGGAGGCCTGCGGGAGCTGCAGCTTCGAAGCCTCAC...GCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp TCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGGTGAGGCTTCGAAGCTaGAGCTCCCGCAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SLGRESWAFPEWHQQVGQVRLRS*SSRRPP
Trigger: AGGAGGCCTGCGGGAGCTGCAGCTTCGAAGCCTCAC...CTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp GGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCAGTGCTTGGGGCCCGTaGAGCCGGCAGCACACTGCT +
Preference number: 4 (lower is better)
Translates to: GSGRRALPPLDASRSQAFSAWGP*SRQHTA
Trigger: AGCAGTGTGCTGCCGGCTGCACGGGCCCCAAGCACT...GAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp TCACACTGGCACGTCCAGACCCAGGTACTCTGGGTTCTCTGCCGTAGGTGTCCCGCCAGGCAGTCAGAGTaGTTGGGGCCCGTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: SHWHVQTQVLWVLCRRCPARQSE*LGPVQP
Trigger: CGGCTGCACGGGCCCCAAGCACTCTGACTGCCTGGC...GGGACACCTACGGCAGAGAACCCAGAGTACCTGGGTCTGGACGTGCCAGTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp CCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCGTCACCTCTTGGTTGTaGAGGGGGCAGACGAGGGTG +
Preference number: 4 (lower is better)
Translates to: PWGESLGPFQSGTSRSGSVTSWL*RGQTRV
Trigger: CACCCTCGTCTGCCCCCTGCACAACCAAGAGGTGAC...GCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp CCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGTCCCTGGGGAGCCCCTaGAGTACTCGGCATTCCTCC +
Preference number: 4 (lower is better)
Translates to: PLEVVGGPSHLLMPAEVRSLGSP*STRHSS
Trigger: GGAGGAATGCCGAGTACTGCAGGGGCTCCCCAGGGA...CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCATCCCTGGGGAGCCCCTaGAGTACTCGGCATTCCTCC +
Preference number: 4 (lower is better)
Translates to: GRESWAFPEWHQQVGQQASLGSP*STRHSS
Trigger: GGAGGAATGCCGAGTACTGCAGGGGCTCCCCAGGGA...TGCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp CCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGAGAGGGCTGGCTCTCTaGTCGGCGGGGCAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: PILPWGESLGPFQSGTSRRGLAL*SAGQPL
Trigger: CAAGGGCTGCCCCGCCGAGCAGAGAGCCAGCCCTCT...CCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp GGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCGTAGATGAGCTGCGGTaGCTGTGGTGGACCATGCCC +
Preference number: 4 (lower is better)
Translates to: GERVLGLSRVAPAGRAAGVDELR*LWWTMP
Trigger: GGGCATGGTCCACCACAGGCACCGCAGCTCATCTAC...GCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp CGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCCCGTAGATGAGCTGCGGTaGCTGTGGTGGACCATGCCC +
Preference number: 4 (lower is better)
Translates to: RRALPPLDASRSQAFPAPVDELR*LWWTMP
Trigger: GGGCATGGTCCACCACAGGCACCGCAGCTCATCTAC...GGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp ACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGAGCCCCTTCGGAGGGTaGCAGTGGAGACCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: TPQCCSSSNEAGPLPAIWSPFGG*QWRPGG
Trigger: GCCCCCAGGTCTCCACTGGCACCCTCCGAAGGGGCT...CCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCTGTGTGGGGAGGCTTTaGAGCCCCTTGGCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSCVGRL*SPLAAP
Trigger: GGGGGCAGCCAAGGGGCTGCAAAGCCTCCCCACACA...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCCCCTGCGCAGGCATGGCTaGCAGGGTCTGAGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: RRALPPLDASRSQAFPAPLRRHG*QGLSLC
Trigger: ACAGAGACTCAGACCCTGGCAGCCATGCCTGCGCAG...GGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584601.5
CDS-3UTR CCA 90 bp CTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGGGTGGGTCTCGGGACTaGCAGGGAGCCGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LPSAVPLPTRLDPFQPSGGGSRD*QGAAAS
Trigger: TGAAGCTGCGGCTCCCTGCCAGTCCCGAGACCCACC...CCCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTGGAGCTGCTCTGGCTaGAGCGGGGCAGTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: PGSGRRALPPLDASRSQAWSCSG*SGAVLE
Trigger: CTCCAACACTGCCCCGCTCCAGCCAGAGCAGCTCCA...GGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp ATGGCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCGGGTTCCGAAAGAGCTaGTCCCAGGGCACCGTGTGC +
Preference number: 4 (lower is better)
Translates to: MAGSPGSGRRALPPLDASGFRKS*SQGTVC
Trigger: GCACACGGTGCCCTGGGACCAGCTCTTTCGGAACCC...GCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGGGCCGGTTGGCAGTGTaGAGCAGAGCTTGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: LPSAVPLPTRLDPFQPSGGRLAV*SRAWCG
Trigger: CCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCC...CCCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp AGTCCACTGCCCAGTTCCCTCAGTGAGCGCAGCCCCAGCCAGCTGATGCCCAGCCGTCCTCTGGCCGGTTaGCAGTGTGGAGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: SPLPSSLSERSPSQLMPSRPLAG*QCGAEL
Trigger: AAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACG...GCTGGGCATCAGCTGGCTGGGGCTGCGCTCACTGAGGGAACTGGGCAGTGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CCA 90 bp GGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCCGTCCTCTGGCCGGTTaGCAGTGTGGAGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: GERVLGLSRVAPAGRAAGRPLAG*QCGAEL
Trigger: AAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACG...GCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp TTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGTGGACGTCAGAGGGCTaGCTCTCTGCTCGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: FFPGERVLGLSRVAPAGRWTSEG*LSARRG
Trigger: GCCCCGCCGAGCAGAGAGCCAGCCCTCTGACGTCCA...CCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp ACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGTGGACGTCAGAGGGCTaGCTCTCTGCTCGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: TPQCCSSSNEAGPLPAIWWTSEG*LSARRG
Trigger: GCCCCGCCGAGCAGAGAGCCAGCCCTCTGACGTCCA...CCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCATCCGCATCTGCGCCTaGTTGGGCATCGCTCCGCTA +
Preference number: 4 (lower is better)
Translates to: PWGESLGPFQSGTSRSGSIRICA*LGIAPL
Trigger: TAGCGGAGCGATGCCCAACCAGGCGCAGATGCGGAT...GCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp CCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGACCGCCGGCGGAGAATaGACTCCAGCGCCATCCACT +
Preference number: 4 (lower is better)
Translates to: PLEVVGGPSHLLMPAEVRTAGGE*TPAPST
Trigger: AGTGGATGGCGCTGGAGTCCATTCTCCGCCGGCGGT...CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCAATGACCACAAAGCGCTaGGGGTCCCTGGCCATGCGG +
Preference number: 4 (lower is better)
Translates to: GRESWAFPEWHQQVGQQAMTTKR*GSLAMR
Trigger: CCGCATGGCCAGGGACCCCCAGCGCTTTGTGGTCAT...TGCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp CAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCACTGCGGTGCCTGTGGTaGACCATGCCCCCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: QRLPSAVPLPTRLDPFQPLRCLW*TMPPAP
Trigger: GGGCGCTGGGGGCATGGTCCACCACAGGCACCGCAG...TGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp ACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGAGCTGCGGTGCCTGTaGTGGACCATGCCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: TPQCCSSSNEAGPLPAIWELRCL*WTMPPA
Trigger: CGCTGGGGGCATGGTCCACCACAGGCACCGCAGCTC...CCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAGTGCCAGTGGAGACCTaGGGGCCTCCTCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: AGSPGSGRRALPPLDASRVPVET*GPPLQR
Trigger: CCTCTGAAGAGGAGGCCCCCAGGTCTCCACTGGCAC...TCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCACGGGGCGAAGGGGGCTaGGGCCGAACATCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QRLPSAVPLPTRLDPFQPRGEGG*GRTSGW
Trigger: CCAGCCAGATGTTCGGCCCCAGCCCCCTTCGCCCCG...TGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCACGGGGCGAAGGGGGCTaGGGCCGAACATCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ERAKLGCGIHWTLESHWARGEGG*GRTSGW
Trigger: CCAGCCAGATGTTCGGCCCCAGCCCCCTTCGCCCCG...TGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCGGGGCAGCTCCTCCCTaGGGTGTCAAGTACTCGGGG +
Preference number: 4 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSGAAPP*GVKYSG
Trigger: CCCCGAGTACTTGACACCCCAGGGAGGAGCTGCCCC...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCATGGCAGGTTCCCCTaGAAGTGGTCGGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: GRRALPPLDASRSQAFPAHGRFP*KWSEGP
Trigger: AGGGCCCTCCGACCACTTCCAGGGGAACCTGCCATG...AGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGACATGGCAGGTTCCCCTaGAAGTGGTCGGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: AGSPGSGRRALPPLDASRHGRFP*KWSEGP
Trigger: AGGGCCCTCCGACCACTTCCAGGGGAACCTGCCATG...TCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCCCGGCCAAGCTGGGCTGTaGCATCCACTGGACCCTAGA +
Preference number: 4 (lower is better)
Translates to: RRALPPLDASRSQAFPAPGQAGL*HPLDPR
Trigger: TCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCC...GGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp AGTCCACTGCCCAGTTCCCTCAGTGAGCGCAGCCCCAGCCAGCTGATGCCCAGCGGCCAAGCTGGGCTGTaGCATCCACTGGACCCTAGA +
Preference number: 4 (lower is better)
Translates to: SPLPSSLSERSPSQLMPSGQAGL*HPLDPR
Trigger: TCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCC...GCTGGGCATCAGCTGGCTGGGGCTGCGCTCACTGAGGGAACTGGGCAGTGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
3UTR CAA 72 bp AGCTCCGTCTCTTTCAGGATCCGCATCTGCGCCTGGTaGGGCATCGCTCCGCTAGGTGTCAGCGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: SSVSFRIRICAW*GIAPLGVSGST
Trigger: GGTGGAGCCGCTGACACCTAGCGGAGCGATGCCCAACCAGGCGCAGATGCGGATCCTGAAAGAGACGGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR TCA 90 bp CGCCCACACACTCGTCCTCTGGCCGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGTGTCTGTGTTGTAGGTaGCCAGGGCTGGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: RPHTRPLAGWQCGAELGACLCCR*PGLGSA
Trigger: TGCACTGCCCAGCCCTGGTCACCTACAACACAGACA...CGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGAGTGTGTGGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR TCA 90 bp GCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGGAGTGGGTGCAGTTaGTGGGGCAAGGCTGGCATG +
Preference number: 4 (lower is better)
Translates to: AGSPGSGRRALPPLDASRRSGCS*WGKAGM
Trigger: CATGCCAGCCTTGCCCCATCAACTGCACCCACTCCT...TCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp TGCTCTGGCTGGAGCGGGGCAGTGTTGGAGGCTGGGTCCCCATCAAAGCTCTCCAGGAGTGGGTGCAGTTaGTGGGGCAAGGCTGGCATG +
Preference number: 4 (lower is better)
Translates to: CSGWSGAVLEAGSPSKLSRSGCS*WGKAGM
Trigger: CATGCCAGCCTTGCCCCATCAACTGCACCCACTCCT...GGAGAGCTTTGATGGGGACCCAGCCTCCAACACTGCCCCGCTCCAGCCAGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR TCA 90 bp GGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCAGGGCCCAACCACCGCAGAGATaGTGGACGTCAGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GQAGLWHPLDPRVSLGRAQPPQR*WTSEGW
Trigger: CCAGCCCTCTGACGTCCATCATCTCTGCGGTGGTTG...GGCCCTGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp GGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCACAACCACCGCAGAGATaGTGGACGTCAGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GRESWAFPEWHQQVGQQAQPPQR*WTSEGW
Trigger: CCAGCCCTCTGACGTCCATCATCTCTGCGGTGGTTG...TGCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR TCA 90 bp CCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCCATGGTTGGGACTCTTaGCCAGCACGTTCCGAGCGG +
Preference number: 4 (lower is better)
Translates to: PGSGRRALPPLDASRSQAHGWDS*PARSER
Trigger: CCGCTCGGAACGTGCTGGTCAAGAGTCCCAACCATG...GGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCATCACTCTGGTGGGTaGACCGCCGGCGGAGAATGG +
Preference number: 4 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSHHSGG*TAGGEW
Trigger: CCATTCTCCGCCGGCGGTTCACCCACCAGAGTGATG...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp GGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCATCACTCTGGTGGGTaGACCGCCGGCGGAGAATGG +
Preference number: 4 (lower is better)
Translates to: GSGRRALPPLDASRSQAFHHSGG*TAGGEW
Trigger: CCATTCTCCGCCGGCGGTTCACCCACCAGAGTGATG...GAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCGCCACTCCTGGTAGATaGGCTGCGGTGCCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSATPGR*AAVPVV
Trigger: CACCACAGGCACCGCAGCTCATCTACCAGGAGTGGC...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCAAGTTCCAGGTTTCCCTaGACCACCTGGCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GRESWAFPEWHQQVGQQASSRFP*TTWQPW
Trigger: CCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGAACT...TGCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp CCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCACAATCCGCAGCCTCTaGAGTGGGACCTGCCTCACT +
Preference number: 4 (lower is better)
Translates to: PWGESLGPFQSGTSRSGSTIRSL*SGTCLT
Trigger: AGTGAGGCAGGTCCCACTGCAGAGGCTGCGGATTGT...GCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp GGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCGTGAGGCTTCGAAGCTaGAGCTCCCGCAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GSGRRALPPLDASRSQAFVRLRS*SSRRPP
Trigger: AGGAGGCCTGCGGGAGCTGCAGCTTCGAAGCCTCAC...GAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCGTGAGGCTTCGAAGCTaGAGCTCCCGCAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSVRLRS*SSRRPP
Trigger: AGGAGGCCTGCGGGAGCTGCAGCTTCGAAGCCTCAC...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGAGTGCTTGGGGCCCGTaGAGCCGGCAGCACACTGCT +
Preference number: 4 (lower is better)
Translates to: DSPVLFLFQRGWTPSSHLSAWGP*SRQHTA
Trigger: AGCAGTGTGCTGCCGGCTGCACGGGCCCCAAGCACT...CAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGGTCACCTCTTGGTTGTaGAGGGGGCAGACGAGGGTG +
Preference number: 4 (lower is better)
Translates to: PLEVVGGPSHLLMPAEVRVTSWL*RGQTRV
Trigger: CACCCTCGTCTGCCCCCTGCACAACCAAGAGGTGAC...CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GCAGAGCTTGGTGCGGGTTCCGAAAGAGCTGGTCCCAGGGCACCGTGTGCACGAGTCACCTCTTGGTTGTaGAGGGGGCAGACGAGGGTG +
Preference number: 4 (lower is better)
Translates to: AELGAGSERAGPRAPCARVTSWL*RGQTRV
Trigger: CACCCTCGTCTGCCCCCTGCACAACCAAGAGGTGAC...TCGTGCACACGGTGCCCTGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR GCA 90 bp GAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCTGGTCCCAGGGCACCGTGTGCACGGGCACAGGGCTTGCTaGACTTCTCACACCGCTGTG +
Preference number: 4 (lower is better)
Translates to: EQSLVRVPKELVPGHRVHGHRAC*TSHTAV
Trigger: CACAGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCC...GTGCACACGGTGCCCTGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR GCA 90 bp TGGAAGGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATCCTGGACCCCAGCAGTaGCCTCGGGCGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: WKERAKLGCGIHWTLESHPGPQQ*PRAHSW
Trigger: CCAGCTGTGCGCCCGAGGGCACTGCTGGGGTCCAGG...ATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCCTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCTCCCTGGGGAGCCCCTaGAGTACTCGGCATTCCTCC +
Preference number: 4 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSSLGSP*STRHSS
Trigger: GGAGGAATGCCGAGTACTGCAGGGGCTCCCCAGGGA...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCTGGTCCCAGTCCCTGGGGAGCCCCTaGAGTACTCGGCATTCCTCC +
Preference number: 4 (lower is better)
Translates to: RLAVWSRAWCGFRKSWSQSLGSP*STRHSS
Trigger: GGAGGAATGCCGAGTACTGCAGGGGCTCCCCAGGGA...CTGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR GCA 90 bp CCCAGGTACTCTGGGTTCTCTGCCGTAGGTGTCCCTTTGAAGGTGCTGGGTGGAAGAGGGCTGGCTCTCTaGTCGGCGGGGCAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: PRYSGFSAVGVPLKVLGGRGLAL*SAGQPL
Trigger: CAAGGGCTGCCCCGCCGAGCAGAGAGCCAGCCCTCT...TCCACCCAGCACCTTCAAAGGGACACCTACGGCAGAGAACCCAGAGTACCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp CGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCCCTTCAGGATCCGCATCTaGGCCTGGTTGGGCATCGCT +
Preference number: 4 (lower is better)
Translates to: RRALPPLDASRSQAFPAPFRIRI*AWLGIA
Trigger: AGCGATGCCCAACCAGGCGCAGATGCGGATCCTGAA...GGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp ACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGTGTGTGGGGAGGCTTTaGAGCCCCTTGGCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: TPQCCSSSNEAGPLPAIWCVGRL*SPLAAP
Trigger: GGGGGCAGCCAAGGGGCTGCAAAGCCTCCCCACACA...CCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCTGCGCAGGCATGGCTaGCAGGGTCTGAGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: PLEVVGGPSHLLMPAEVRLRRHG*QGLSLC
Trigger: ACAGAGACTCAGACCCTGGCAGCCATGCCTGCGCAG...CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584601.5
CDS-3UTR CCA 90 bp CCATGCCCAGACCATAGCACACTCGGGCACAGGGCTTGCTGCACTTCTCACACCGGTGGGTCTCGGGACTaGCAGGGAGCCGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: PCPDHSTLGHRACCTSHTGGSRD*QGAAAS
Trigger: TGAAGCTGCGGCTCCCTGCCAGTCCCGAGACCCACC...GGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGTGTGCTATGGTCTGGGCATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CCA 90 bp CCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGCAGGAAGGACAGGCTaGCATTGGTGGGCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: PGERVLGLSRVAPAGRAAAGRTG*HWWAGR
Trigger: CCTACCTGCCCACCAATGCCAGCCTGTCCTTCCTGC...TGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp ACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGCAGTCAGTGGGCAGTaGCCCCTTGCAGCGGGCACA +
Preference number: 4 (lower is better)
Translates to: TPQCCSSSNEAGPLPAIWAVSGQ*PLAAGT
Trigger: TGTGCCCGCTGCAAGGGGCCACTGCCCACTGACTGC...CCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TCACACTGGCACGTCCAGACCCAGGTACTCTGGGTTCTCTGCCGTAGGTGTCCCGCAGTCAGTGGGCAGTaGCCCCTTGCAGCGGGCACA +
Preference number: 4 (lower is better)
Translates to: SHWHVQTQVLWVLCRRCPAVSGQ*PLAAGT
Trigger: TGTGCCCGCTGCAAGGGGCCACTGCCCACTGACTGC...GGGACACCTACGGCAGAGAACCCAGAGTACCTGGGTCTGGACGTGCCAGTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp CCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGGCAGTCAGTGGGCAGTaGCCCCTTGCAGCGGGCACA +
Preference number: 4 (lower is better)
Translates to: PILPWGESLGPFQSGTSRAVSGQ*PLAAGT
Trigger: TGTGCCCGCTGCAAGGGGCCACTGCCCACTGACTGC...CCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp ACCCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGCAGTCAGAGTGCTTaGGGCCCGTGCAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: TPFFPGERVLGLSRVAPAGSQSA*GPCSRQ
Trigger: CTGCCGGCTGCACGGGCCCCAAGCACTCTGACTGCC...TGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp CGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCCCTCTGCTGTCACCTCTTaGTTGTGCAGGGGGCAGACG +
Preference number: 4 (lower is better)
Translates to: RRALPPLDASRSQAFPAPSAVTS*LCRGQT
Trigger: CGTCTGCCCCCTGCACAACCAAGAGGTGACAGCAGA...GGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCCCGGCAGTGTTGGAGGCTaGGTCCCCATCAAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: RRALPPLDASRSQAFPAPGSVGG*VPIKAL
Trigger: GAGAGCTTTGATGGGGACCCAGCCTCCAACACTGCC...GGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTTGGAGCTGCTCTGGCTaGAGCGGGGCAGTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: GSPGSGRRALPPLDASRSWSCSG*SGAVLE
Trigger: CTCCAACACTGCCCCGCTCCAGCCAGAGCAGCTCCA...ACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCGTCCTCTGGCCGGTTaGCAGTGTGGAGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: GRRALPPLDASRSQAFPARPLAG*QCGAEL
Trigger: AAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACG...AGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCACACACTCGTCCTCTaGCCGGTTGGCAGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: WGESLGPFQSGTSRSGSRHTLVL*PVGSVE
Trigger: CTCCACACTGCCAACCGGCCAGAGGACGAGTGTGTG...CCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp AGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCCCTCGGGCGCACAGCTaGTGGCAGGCCAGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: SLIGQGLRIHKDSPVLFLPRAHS*WQARPS
Trigger: CGAGGGCCTGGCCTGCCACCAGCTGTGCGCCCGAGG...GAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp AGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTCCTCGGGCGCACAGCTaGTGGCAGGCCAGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: RIHKDSPVLFLFQRGWTPPRAHS*WQARPS
Trigger: CGAGGGCCTGGCCTGCCACCAGCTGTGCGCCCGAGG...AGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGACCGCCGGCGGAGAATaGACTCCAGCGCCATCCACT +
Preference number: 4 (lower is better)
Translates to: LPSAVPLPTRLDPFQPSGTAGGE*TPAPST
Trigger: AGTGGATGGCGCTGGAGTCCATTCTCCGCCGGCGGT...CCCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGTAGTTGTAGGGACAGGCAGTCACACAGCTGGCGCCGAATGTATACCGGCCCTGAGCTGCGGTGCCTGTaGTGGACCATGCCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: GSCRDRQSHSWRRMYTGPELRCL*WTMPPA
Trigger: CGCTGGGGGCATGGTCCACCACAGGCACCGCAGCTC...AGGGCCGGTATACATTCGGCGCCAGCTGTGTGACTGCCTGTCCCTACAACTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp CCCAGGTACTCTGGGTTCTCTGCCGTAGGTGTCCCTTTGAAGGTGCTGGGTGGAGAGCTGCGGTGCCTGTaGTGGACCATGCCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: PRYSGFSAVGVPLKVLGGELRCL*WTMPPA
Trigger: CGCTGGGGGCATGGTCCACCACAGGCACCGCAGCTC...TCCACCCAGCACCTTCAAAGGGACACCTACGGCAGAGAACCCAGAGTACCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp GGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTGTGCCAGTGGAGACCTaGGGGCCTCCTCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: GSPGSGRRALPPLDASRSVPVET*GPPLQR
Trigger: CCTCTGAAGAGGAGGCCCCCAGGTCTCCACTGGCAC...ACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCTGGTCCCAGTGCCAGTGGAGACCTaGGGGCCTCCTCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: PVGSVEQSLVRVPKELVPVPVET*GPPLQR
Trigger: CCTCTGAAGAGGAGGCCCCCAGGTCTCCACTGGCAC...TGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp TTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGTTCGGAGGGTGCCAGTaGAGACCTGGGGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: FFPGERVLGLSRVAPAGRFGGCQ*RPGGLL
Trigger: GAGGAGGCCCCCAGGTCTCCACTGGCACCCTCCGAA...CCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCGGCTTTGCAGCCCCTTaGCTGCCCCCATTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSGFAAP*LPPFPG
Trigger: ACCTGGGAATGGGGGCAGCCAAGGGGCTGCAAAGCC...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCCCTTCACATATTCAGGCTaGGGGCTGCAGGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: RRALPPLDASRSQAFPAPFTYSG*GLQVRG
Trigger: CCCCCTGACCTGCAGCCCCCAGCCTGAATATGTGAA...GGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCTGGGCCTTTCCAGAGTaGCACCAGCAGGTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSWAFPE*HQQVGQ
Trigger: CTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCA...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGCTGCCTGCGCAGGCATaGCTGCCAGGGTCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: LPSAVPLPTRLDPFQPSGLPAQA*LPGSES
Trigger: AGACTCAGACCCTGGCAGCCATGCCTGCGCAGGCAG...CCCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584601.5
CDS-3UTR TCA 90 bp GGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCAGGGCCCTTGGTTGTGAGCGATaGGCACGTAGCCCTGCACCT +
Preference number: 4 (lower is better)
Translates to: GQAGLWHPLDPRVSLGRALGCER*ARSPAP
Trigger: AGGTGCAGGGCTACGTGCTCATCGCTCACAACCAAG...GGCCCTGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp TGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCTTGGTTGTGAGCGATaGGCACGTAGCCCTGCACCT +
Preference number: 4 (lower is better)
Translates to: WGESLGPFQSGTSRSGSRLGCER*ARSPAP
Trigger: AGGTGCAGGGCTACGTGCTCATCGCTCACAACCAAG...CCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR TCA 90 bp AGTCCACTGCCCAGTTCCCTCAGTGAGCGCAGCCCCAGCCAGCTGATGCCCAGCGTGCGCGTCAGGCTCTaGCAATCCTCAGAACTCTCT +
Preference number: 4 (lower is better)
Translates to: SPLPSSLSERSPSQLMPSVRVRL*QSSELS
Trigger: AGAGAGTTCTGAGGATTGTCAGAGCCTGACGCGCAC...GCTGGGCATCAGCTGGCTGGGGCTGCGCTCACTGAGGGAACTGGGCAGTGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR TCA 90 bp CGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCCCGTGCGCGTCAGGCTCTaGCAATCCTCAGAACTCTCT +
Preference number: 4 (lower is better)
Translates to: RRALPPLDASRSQAFPAPVRVRL*QSSELS
Trigger: AGAGAGTTCTGAGGATTGTCAGAGCCTGACGCGCAC...GGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp AGGGCCGCTTCCCCTCTCAGGCCAGCTTCCCTAAGGCTTTCAGTACCCAGGATCGGTTCTGGAAGACGCTaGGGTCAGGCAGGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: RAASPLRPASLRLSVPRIGSGRR*GQAGCP
Trigger: CGGACAGCCTGCCTGACCTCAGCGTCTTCCAGAACC...GATCCTGGGTACTGAAAGCCTTAGGGAAGCTGGCCTGAGAGGGGAAGCGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR TCA 90 bp GTACTCTGGGTTCTCTGCCGTAGGTGTCCCTTTGAAGGTGCTGGGTGGAGCCCCGGTTCTGGAAGACGCTaGGGTCAGGCAGGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: VLWVLCRRCPFEGAGWSPGSGRR*GQAGCP
Trigger: CGGACAGCCTGCCTGACCTCAGCGTCTTCCAGAACC...GGGGCTCCACCCAGCACCTTCAAAGGGACACCTACGGCAGAGAACCCAGAGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR TCA 90 bp TTTGACGACCCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCGCCCAGTTCCCTCAGTaGGCGCAGCCCCAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: FDDPILPWGESLGPFQSGAQFPQ*AQPQPA
Trigger: AGCTGGCTGGGGCTGCGCTCACTGAGGGAACTGGGC...GCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGGGTCGTCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR TCA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCGGGTGTTATGGTGGATaGGGGCCAGTCCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSGCYGG*GPVHCP
Trigger: TGGGCAGTGGACTGGCCCTCATCCACCATAACACCC...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp TCGCAAGTGCTCCATGCCCAGACCATAGCACACTCGGGCACAGGGCTTGCTGCAGGAACTGGCTGCAGTTaGCACACTGGGTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SQVLHAQTIAHSGTGLAAGTGCS*HTGWAL
Trigger: CAGGGCCCACCCAGTGTGTCAACTGCAGCCAGTTCC...TGCAGCAAGCCCTGTGCCCGAGTGTGCTATGGTCTGGGCATGGAGCACTTGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR TCA 90 bp CTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGCATGGTTGGGACTCTTaGCCAGCACGTTCCGAGCGG +
Preference number: 4 (lower is better)
Translates to: LPSAVPLPTRLDPFQPSGHGWDS*PARSER
Trigger: CCGCTCGGAACGTGCTGGTCAAGAGTCCCAACCATG...CCCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp GGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCAGGGCCATCGTCCTCCAGCAGTaGGCGGTAGAAGGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: GQAGLWHPLDPRVSLGRAIVLQQ*AVEGAV
Trigger: GACAGCACCTTCTACCGCTCACTGCTGGAGGACGAT...GGCCCTGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp AGGGCCGCTTCCCCTCTCAGGCCAGCTTCCCTAAGGCTTTCAGTACCCAGGATCGCCACTCCTGGTAGATaGGCTGCGGTGCCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: RAASPLRPASLRLSVPRIATPGR*AAVPVV
Trigger: CACCACAGGCACCGCAGCTCATCTACCAGGAGTGGC...GATCCTGGGTACTGAAAGCCTTAGGGAAGCTGGCCTGAGAGGGGAAGCGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR TCA 90 bp TCTGGCCGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCTGGGCCTTCCCTGCTCCCTaGGGACACATCAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SGRLAVWSRAWCGFRKSWAFPAP*GHIRAS
Trigger: AGAAGCCCTGATGTGTCCTCAGGGAGCAGGGAAGGC...CCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR TCA 90 bp GGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCATGGCTGCCAGGGTCTaGGTCTCTGTGCTGCACTGC +
Preference number: 4 (lower is better)
Translates to: GSGRRALPPLDASRSQAFMAARV*VSVLHC
Trigger: GCAGTGCAGCACAGAGACTCAGACCCTGGCAGCCAT...GAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584601.5
CDS-3UTR GCA 90 bp ACCCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCACTCCATGGTGCTCACTaGGGCTCCGGCCCCATGGCT +
Preference number: 4 (lower is better)
Translates to: TPFFPGERVLGLSRVAPALHGAH*GSGPMA
Trigger: AGCCATGGGGCCGGAGCCGCAGTGAGCACCATGGAG...TGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp CACACTCGTCCTCTGGCCGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGCAGCTTCATGTCTGTaGCGGTGCACACTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: HTRPLAGWQCGAELGAGSAASCL*RCTLGC
Trigger: GCACCCAAGTGTGCACCGGCACAGACATGAAGCTGC...GGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGAGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR GCA 90 bp TGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGGCAGCTTCATGTCTGTaGCGGTGCACACTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: WGESLGPFQSGTSRSGSRAASCL*RCTLGC
Trigger: GCACCCAAGTGTGCACCGGCACAGACATGAAGCTGC...CCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp CTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGAGTTCCAGGTTTCCCTaGACCACCTGGCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LPSAVPLPTRLDPFQPSGSSRFP*TTWQPW
Trigger: CCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGAACT...CCCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCACCTCCTGGATATCCTaGAGGAAGGACAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GERVLGLSRVAPAGRAAGTSWIS*RKDRLA
Trigger: TGCCAGCCTGTCCTTCCTGCAGGATATCCAGGAGGT...GCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584450.5
CDS-3UTR GCA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCCTCAAAGAGCTGGGTaGCTCGCACAATCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSPQRAG*LAQSAA
Trigger: GGCTGCGGATTGTGCGAGGCACCCAGCTCTTTGAGG...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp AGCTTGGTGCGGGTTCCGAAAGAGCTGGTCCCAGGGCACCGTGTGCACGAAGCACCTCAAAGAGCTGGGTaGCTCGCACAATCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: SLVRVPKELVPGHRVHEAPQRAG*LAQSAA
Trigger: GGCTGCGGATTGTGCGAGGCACCCAGCTCTTTGAGG...TGCTTCGTGCACACGGTGCCCTGGGACCAGCTCTTTCGGAACCCGCACCAAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR GCA 90 bp TTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGTGAGGCTTCGAAGCTaGAGCTCCCGCAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: FFPGERVLGLSRVAPAGRVRLRS*SSRRPP
Trigger: AGGAGGCCTGCGGGAGCTGCAGCTTCGAAGCCTCAC...CCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp TCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCTGGGCAGTGGCCCCTTaGAGCGGGCACAGCCACCGG +
Preference number: 4 (lower is better)
Translates to: SLGRASESTKTPQCCSSSWAVAP*SGHSHR
Trigger: CCGGTGGCTGTGCCCGCTGCAAGGGGCCACTGCCCA...GGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CCCAGGTACTCTGGGTTCTCTGCCGTAGGTGTCCCTTTGAAGGTGCTGGGTGGAAGTGCTTGGGGCCCGTaGAGCCGGCAGCACACTGCT +
Preference number: 4 (lower is better)
Translates to: PRYSGFSAVGVPLKVLGGSAWGP*SRQHTA
Trigger: AGCAGTGTGCTGCCGGCTGCACGGGCCCCAAGCACT...TCCACCCAGCACCTTCAAAGGGACACCTACGGCAGAGAACCCAGAGTACCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCGTCACCTCTTGGTTGTaGAGGGGGCAGACGAGGGTG +
Preference number: 4 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSVTSWL*RGQTRV
Trigger: CACCCTCGTCTGCCCCCTGCACAACCAAGAGGTGAC...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp AGCTTGGTGCGGGTTCCGAAAGAGCTGGTCCCAGGGCACCGTGTGCACGAAGCACTCGGGCACAGGGCTTaGTGCACTTCTCACACCGCT +
Preference number: 4 (lower is better)
Translates to: SLVRVPKELVPGHRVHEALGHRA*CTSHTA
Trigger: AGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAG...TGCTTCGTGCACACGGTGCCCTGGGACCAGCTCTTTCGGAACCCGCACCAAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR GCA 90 bp TCCCAGGGCACCGTGTGCACGAAGCAGAGGTGGGTGTTATGGTGGATGAGGGCCCTCGGGCACAGGGCTTaGTGCACTTCTCACACCGCT +
Preference number: 4 (lower is better)
Translates to: SQGTVCTKQRWVLWWMRALGHRA*CTSHTA
Trigger: AGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAG...GGCCCTCATCCACCATAACACCCACCTCTGCTTCGTGCACACGGTGCCCTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR GCA 90 bp TGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGTCAAACACTTGGAGCTaGTCTGGCTGGAGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: WGESLGPFQSGTSRSGSRSNTWS*SGWSGA
Trigger: TGCCCCGCTCCAGCCAGAGCAGCTCCAAGTGTTTGA...CCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp ACACTCGTCCTCTGGCCGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGTCAAACACTTGGAGCTaGTCTGGCTGGAGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: TLVLWPVGSVEQSLVRVPSNTWS*SGWSGA
Trigger: TGCCCCGCTCCAGCCAGAGCAGCTCCAAGTGTTTGA...CGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR GCA 90 bp CCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCATCAAACACTTGGAGCTaGTCTGGCTGGAGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: PGERVLGLSRVAPAGRAASNTWS*SGWSGA
Trigger: TGCCCCGCTCCAGCCAGAGCAGCTCCAAGTGTTTGA...TGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp TCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGTGGAGCAGAGCTTGGTaGGGGTTCCGAAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SLGRESWAFPEWHQQVGQWSRAW*GFRKSW
Trigger: CCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCA...CTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp GGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCAGGGCCTGGAGCAGAGCTTGGTaGGGGTTCCGAAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GQAGLWHPLDPRVSLGRAWSRAW*GFRKSW
Trigger: CCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCA...GGCCCTGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTCCTGGACCCCAGCAGTaGCCTCGGGCGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: PRVSLGRASESTKTPQCCPGPQQ*PRAHSW
Trigger: CCAGCTGTGCGCCCGAGGGCACTGCTGGGGTCCAGG...ACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCTCCCTGGGGAGCCCCTaGAGTACTCGGCATTCCTCC +
Preference number: 4 (lower is better)
Translates to: GKGQAGLWHPLDPRVSLGSLGSP*STRHSS
Trigger: GGAGGAATGCCGAGTACTGCAGGGGCTCCCCAGGGA...GCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp ATGGCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCTTCAGGATCCGCATCTaGGCCTGGTTGGGCATCGCT +
Preference number: 4 (lower is better)
Translates to: MAGSPGSGRRALPPLDASFRIRI*AWLGIA
Trigger: AGCGATGCCCAACCAGGCGCAGATGCGGATCCTGAA...GCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GCTTGGTGCGGGTTCCGAAAGAGCTGGTCCCAGGGCACCGTGTGCACGAAGCAGTTCAGGATCCGCATCTaGGCCTGGTTGGGCATCGCT +
Preference number: 4 (lower is better)
Translates to: AWCGFRKSWSQGTVCTKQFRIRI*AWLGIA
Trigger: AGCGATGCCCAACCAGGCGCAGATGCGGATCCTGAA...CTGCTTCGTGCACACGGTGCCCTGGGACCAGCTCTTTCGGAACCCGCACCAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR GCA 90 bp GGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTAGCTGTGTCACCAGCTaGACCGTGGATGTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GRRALPPLDASRSQAFPASCVTS*TVDVRQ
Trigger: CTGCCTGACATCCACGGTGCAGCTGGTGACACAGCT...AGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGGTAGATGAGCTGCGGTaGCTGTGGTGGACCATGCCC +
Preference number: 4 (lower is better)
Translates to: LPSAVPLPTRLDPFQPSGVDELR*LWWTMP
Trigger: GGGCATGGTCCACCACAGGCACCGCAGCTCATCTAC...CCCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCACTCTCATCACTGCCTaGGCAGGCATGGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GSGRRALPPLDASRSQAFTLITA*AGMAAR
Trigger: CCTGGCAGCCATGCCTGCGCAGGCAGTGATGAGAGT...GAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584601.5
CDS-3UTR CCA 90 bp GGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCTGGTCCCAGGGCAGGAAGGACAGGCTaGCATTGGTGGGCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: GWQCGAELGAGSERAGPRAGRTG*HWWAGR
Trigger: CCTACCTGCCCACCAATGCCAGCCTGTCCTTCCTGC...CCTGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CCA 90 bp CGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCCCTTGTCCTCAAAGAGCTaGGTGCCTCGCACAATCCGC +
Preference number: 4 (lower is better)
Translates to: RRALPPLDASRSQAFPAPLSSKS*VPRTIR
Trigger: GCGGATTGTGCGAGGCACCCAGCTCTTTGAGGACAA...GGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGCTGGGGGTTCCGCTaGATCAAGACCCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: AGSPGSGRRALPPLDASRSWGFR*IKTPPF
Trigger: GAAAGGAGGGGTCTTGATCCAGCGGAACCCCCAGCT...TCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGGCAGTCAGTGGGCAGTaGCCCCTTGCAGCGGGCACA +
Preference number: 4 (lower is better)
Translates to: PQRLPSAVPLPTRLDPFQAVSGQ*PLAAGT
Trigger: TGTGCCCGCTGCAAGGGGCCACTGCCCACTGACTGC...CTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCAGCAGTCAGTGGGCAGTaGCCCCTTGCAGCGGGCACA +
Preference number: 4 (lower is better)
Translates to: QRLPSAVPLPTRLDPFQPAVSGQ*PLAAGT
Trigger: TGTGCCCGCTGCAAGGGGCCACTGCCCACTGACTGC...TGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TGGAAGGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATGGCAGTCAGAGTGCTTaGGGCCCGTGCAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: WKERAKLGCGIHWTLESHGSQSA*GPCSRQ
Trigger: CTGCCGGCTGCACGGGCCCCAAGCACTCTGACTGCC...ATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCCTTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGGTAGGTGACCAGGGCTaGGCAGTGCAGCTCACAGAT +
Preference number: 4 (lower is better)
Translates to: SLGRESWAFPEWHQQVGQVGDQG*AVQLTD
Trigger: ATCTGTGAGCTGCACTGCCCAGCCCTGGTCACCTAC...CTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp GGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCAGGGCCAGGCAGTCACACAGCTaGCGCCGAATGTATACCGGC +
Preference number: 4 (lower is better)
Translates to: GQAGLWHPLDPRVSLGRARQSHS*RRMYTG
Trigger: GCCGGTATACATTCGGCGCCAGCTGTGTGACTGCCT...GGCCCTGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGTCTGCTGTCACCTCTTaGTTGTGCAGGGGGCAGACG +
Preference number: 4 (lower is better)
Translates to: WGESLGPFQSGTSRSGSRSAVTS*LCRGQT
Trigger: CGTCTGCCCCCTGCACAACCAAGAGGTGACAGCAGA...CCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp CATGCCCAGACCATAGCACACTCGGGCACAGGGCTTGCTGCACTTCTCACACCGTGGAGCTGCTCTGGCTaGAGCGGGGCAGTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: HAQTIAHSGTGLAALLTPWSCSG*SGAVLE
Trigger: CTCCAACACTGCCCCGCTCCAGCCAGAGCAGCTCCA...CGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGTGTGCTATGGTCTGGGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CCA 90 bp TTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGTGGAGCTGCTCTGGCTaGAGCGGGGCAGTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: FFPGERVLGLSRVAPAGRWSCSG*SGAVLE
Trigger: CTCCAACACTGCCCCGCTCCAGCCAGAGCAGCTCCA...CCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp CCCTCGCCCACACACTCGTCCTCTGGCCGGTTGGCAGTGTGGAGCAGAGCTTGGCAGAGGTGGGTGTTATaGTGGATGAGGGCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: PSPTHSSSGRLAVWSRAWQRWVL*WMRASP
Trigger: TGGACTGGCCCTCATCCACCATAACACCCACCTCTG...CCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGAGTGTGTGGGCGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CCA 90 bp GGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCAGGGCCGTGTGGAGCAGAGCTTaGTGCGGGTTCCGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: GQAGLWHPLDPRVSLGRAVWSRA*CGFRKS
Trigger: GCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACAC...GGCCCTGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCAGGCCGGTTGGCAGTGTaGAGCAGAGCTTGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: ERAKLGCGIHWTLESHWAGRLAV*SRAWCG
Trigger: CCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCC...TGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGGGCCGGTTGGCAGTGTaGAGCAGAGCTTGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: PQRLPSAVPLPTRLDPFQGRLAV*SRAWCG
Trigger: CCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCC...CTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCACACACTCGTCCTCTaGCCGGTTGGCAGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: GSPGSGRRALPPLDASRSHTLVL*PVGSVE
Trigger: CTCCACACTGCCAACCGGCCAGAGGACGAGTGTGTG...ACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCAGGGCCTGGCCCCGAAGGAACTaGCTGCAGTTGACACACTGG +
Preference number: 4 (lower is better)
Translates to: GQAGLWHPLDPRVSLGRAWPRRN*LQLTHW
Trigger: CCAGTGTGTCAACTGCAGCCAGTTCCTTCGGGGCCA...GGCCCTGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGTGGCCCCGAAGGAACTaGCTGCAGTTGACACACTGG +
Preference number: 4 (lower is better)
Translates to: SLGRESWAFPEWHQQVGQWPRRN*LQLTHW
Trigger: CCAGTGTGTCAACTGCAGCCAGTTCCTTCGGGGCCA...CTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp CCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGCACAGGCCACACACTaGTCAGCCTCCGGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: PGERVLGLSRVAPAGRAAAQATH*SASGPK
Trigger: TTTTGGACCGGAGGCTGACCAGTGTGTGGCCTGTGC...TGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp CGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCCCAGGTCCACACAGGAGTaGGTGCAGTTGATGGGGCAA +
Preference number: 4 (lower is better)
Translates to: RRALPPLDASRSQAFPAPRSTQE*VQLMGQ
Trigger: TTGCCCCATCAACTGCACCCACTCCTGTGTGGACCT...GGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCTCAGCTCCGTCTCTTTCAGGATCCGCATCTGCGCCTGGTTGGGCATCGCTCCATCCGCATCTGCGCCTaGTTGGGCATCGCTCCGCTA +
Preference number: 4 (lower is better)
Translates to: PQLRLFQDPHLRLVGHRSIRICA*LGIAPL
Trigger: TAGCGGAGCGATGCCCAACCAGGCGCAGATGCGGAT...GGAGCGATGCCCAACCAGGCGCAGATGCGGATCCTGAAAGAGACGGAGCTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp TGCTCTGGCTGGAGCGGGGCAGTGTTGGAGGCTGGGTCCCCATCAAAGCTCTCCAAGGCGGGAGACATATaGGGAGCCCACACCAGCCAT +
Preference number: 4 (lower is better)
Translates to: CSGWSGAVLEAGSPSKLSKAGDI*GAHTSH
Trigger: ATGGCTGGTGTGGGCTCCCCATATGTCTCCCGCCTT...GGAGAGCTTTGATGGGGACCCAGCCTCCAACACTGCCCCGCTCCAGCCAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp ACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGACCGCCGGCGGAGAATaGACTCCAGCGCCATCCACT +
Preference number: 4 (lower is better)
Translates to: TPQCCSSSNEAGPLPAIWTAGGE*TPAPST
Trigger: AGTGGATGGCGCTGGAGTCCATTCTCCGCCGGCGGT...CCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TCGCAAGTGCTCCATGCCCAGACCATAGCACACTCGGGCACAGGGCTTGCTGCACTCCACACATCACTCTaGTGGGTGAACCGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: SQVLHAQTIAHSGTGLAALHTSL*WVNRRR
Trigger: CCGCCGGCGGTTCACCCACCAGAGTGATGTGTGGAG...TGCAGCAAGCCCTGTGCCCGAGTGTGCTATGGTCTGGGCATGGAGCACTTGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp GGCTGGAGCGGGGCAGTGTTGGAGGCTGGGTCCCCATCAAAGCTCTCCGGCAGAAGGGATCTCCCGGGCTaGGATCCCATCGTAAGGTTT +
Preference number: 4 (lower is better)
Translates to: GWSGAVLEAGSPSKLSGRRDLPG*DPIVRF
Trigger: AAACCTTACGATGGGATCCCAGCCCGGGAGATCCCT...TCTGCCGGAGAGCTTTGATGGGGACCCAGCCTCCAACACTGCCCCGCTCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp TCGCAAGTGCTCCATGCCCAGACCATAGCACACTCGGGCACAGGGCTTGCTGCAATGACCACAAAGCGCTaGGGGTCCCTGGCCATGCGG +
Preference number: 4 (lower is better)
Translates to: SQVLHAQTIAHSGTGLAAMTTKR*GSLAMR
Trigger: CCGCATGGCCAGGGACCCCCAGCGCTTTGTGGTCAT...TGCAGCAAGCCCTGTGCCCGAGTGTGCTATGGTCTGGGCATGGAGCACTTGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp TGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGGTCCAAGGGACTGGCTaGGCCCAAGTCCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: WGESLGPFQSGTSRSGSRVQGTG*AQVLIL
Trigger: CAGAATGAGGACTTGGGCCCAGCCAGTCCCTTGGAC...CCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp CTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCTGCGGTGCCTGTGGTaGACCATGCCCCCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: LRIHKDSPVLFLFQRGWTLRCLW*TMPPAP
Trigger: GGGCGCTGGGGGCATGGTCCACCACAGGCACCGCAG...GGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TGGAAGGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATGAGCTGCGGTGCCTGTaGTGGACCATGCCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: WKERAKLGCGIHWTLESHELRCL*WTMPPA
Trigger: CGCTGGGGGCATGGTCCACCACAGGCACCGCAGCTC...ATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCCTTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp ACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGTGCCAGTGGAGACCTaGGGGCCTCCTCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: TPQCCSSSNEAGPLPAIWVPVET*GPPLQR
Trigger: CCTCTGAAGAGGAGGCCCCCAGGTCTCCACTGGCAC...CCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCGGCTGGGGTCATGTGTaGGGAGGCTTTGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GKGQAGLWHPLDPRVSLGGWGHV*GGFAAP
Trigger: AGGGGCTGCAAAGCCTCCCCACACATGACCCCAGCC...GCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CAGCCAGCTGATGCCCAGCCCTTGCAGGGTCAGCGAGTAGGCGCCATTGTGCAGTTCACATATTCAGGCTaGGGGCTGCAGGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: QPADAQPLQGQRVGAIVQFTYSG*GLQVRG
Trigger: CCCCCTGACCTGCAGCCCCCAGCCTGAATATGTGAA...CTGCACAATGGCGCCTACTCGCTGACCCTGCAAGGGCTGGGCATCAGCTGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp TGGACCCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTCGGGGCGAAGGGGGCTaGGGCCGAACATCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: WTLESHWAGPQNPQRLPSRGEGG*GRTSGW
Trigger: CCAGCCAGATGTTCGGCCCCAGCCCCCTTCGCCCCG...ACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TGCTCTGGCTGGAGCGGGGCAGTGTTGGAGGCTGGGTCCCCATCAAAGCTCTCCGACCCCATTCTTCCCTaGGGAGAGAGTCTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: CSGWSGAVLEAGSPSKLSDPILP*GESLGP
Trigger: AGGCCCAAGACTCTCTCCCCAGGGAAGAATGGGGTC...GGAGAGCTTTGATGGGGACCCAGCCTCCAACACTGCCCCGCTCCAGCCAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp TGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGGACCCCATTCTTCCCTaGGGAGAGAGTCTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: WGESLGPFQSGTSRSGSRDPILP*GESLGP
Trigger: AGGCCCAAGACTCTCTCCCCAGGGAAGAATGGGGTC...CCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp CGCCCACACACTCGTCCTCTGGCCGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGCAGACCCAGGTACTCTaGGTTCTCTGCCGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: RPHTRPLAGWQCGAELGAQTQVL*VLCRRC
Trigger: ACACCTACGGCAGAGAACCCAGAGTACCTGGGTCTG...CGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGAGTGTGTGGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp GGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCCAGACCCAGGTACTCTaGGTTCTCTGCCGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: GERVLGLSRVAPAGRAAGQTQVL*VLCRRC
Trigger: ACACCTACGGCAGAGAACCCAGAGTACCTGGGTCTG...GCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp TGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGGCGGACTTGGCCTTCTaGTTCACACTGGCACGTCCA +
Preference number: 4 (lower is better)
Translates to: WGESLGPFQSGTSRSGSRADLAF*FTLARP
Trigger: TGGACGTGCCAGTGTGAACCAGAAGGCCAAGTCCGC...CCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp GGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCAGGGCCGCGGACTTGGCCTTCTaGTTCACACTGGCACGTCCA +
Preference number: 4 (lower is better)
Translates to: GQAGLWHPLDPRVSLGRAADLAF*FTLARP
Trigger: TGGACGTGCCAGTGTGAACCAGAAGGCCAAGTCCGC...GGCCCTGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCCATGGCAGGTTCCCCTaGAAGTGGTCGGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: GKGQAGLWHPLDPRVSLGHGRFP*KWSEGP
Trigger: AGGGCCCTCCGACCACTTCCAGGGGAACCTGCCATG...GCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCACGCAGAAGGGAGGGTCCTTATAGTGGGCACAGGCCACACACTGGTCAGCCTCATGGCAGGTTCCCCTaGAAGTGGTCGGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: PRRREGPYSGHRPHTGQPHGRFP*KWSEGP
Trigger: AGGGCCCTCCGACCACTTCCAGGGGAACCTGCCATG...AGGCTGACCAGTGTGTGGCCTGTGCCCACTATAAGGACCCTCCCTTCTGCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp CGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCCCCCCCTTCCAGCCATCTaGGAACTCAAGCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: RRALPPLDASRSQAFPAPPLPAI*ELKQEG
Trigger: TCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGG...GGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTGGCCAAGCTGGGCTGTaGCATCCACTGGACCCTAGA +
Preference number: 4 (lower is better)
Translates to: GSPGSGRRALPPLDASRSGQAGL*HPLDPR
Trigger: TCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCC...ACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCGCACTGCGTTTGTCCTaGCCATTCTACTGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: PGSGRRALPPLDASRSQAALRLS*PFYWCP
Trigger: GGGGCACCAGTAGAATGGCCAGGACAAACGCAGTGC...GGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584601.5
CDS-3UTR CCA 90 bp CCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTGCCAGGGAGAAAGGATaGCCGGCCTGGCGGCGCGGT +
Preference number: 4 (lower is better)
Translates to: PRVSLGRASESTKTPQCCAREKG*PAWRRG
Trigger: ACCGCGCCGCCAGGCCGGCCATCCTTTCTCCCTGGC...ACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584601.5
CDS-3UTR TCA 90 bp CTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGTGGTGGGCAGGTAGGTaGGTTCCAGGTTTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: LPSAVPLPTRLDPFQPSGWWAGR*VPGFPA
Trigger: TGCAGGGAAACCTGGAACTCACCTACCTGCCCACCA...CCCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTTGGTTGTGAGCGATaGGCACGTAGCCCTGCACCT +
Preference number: 4 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSLGCER*ARSPAP
Trigger: AGGTGCAGGGCTACGTGCTCATCGCTCACAACCAAG...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp CCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGGTGCGCGTCAGGCTCTaGCAATCCTCAGAACTCTCT +
Preference number: 4 (lower is better)
Translates to: PLEVVGGPSHLLMPAEVRVRVRL*QSSELS
Trigger: AGAGAGTTCTGAGGATTGTCAGAGCCTGACGCGCAC...CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp TCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGGTGCGCGTCAGGCTCTaGCAATCCTCAGAACTCTCT +
Preference number: 4 (lower is better)
Translates to: SLGRESWAFPEWHQQVGQVRVRL*QSSELS
Trigger: AGAGAGTTCTGAGGATTGTCAGAGCCTGACGCGCAC...CTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR TCA 90 bp GCAGCCAGCAAACTCCTGGATATTGGCACTGGTAACTGCCCTCACCTCTCGCAAGCCCAGTTCCCTCAGTaGGCGCAGCCCCAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: AASKLLDIGTGNCPHLSQAQFPQ*AQPQPA
Trigger: AGCTGGCTGGGGCTGCGCTCACTGAGGGAACTGGGC...TTGCGAGAGGTGAGGGCAGTTACCAGTGCCAATATCCAGGAGTTTGCTGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR TCA 90 bp TTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGCCCAGTTCCCTCAGTaGGCGCAGCCCCAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LGRASESTKTPQCCSSSNAQFPQ*AQPQPA
Trigger: AGCTGGCTGGGGCTGCGCTCACTGAGGGAACTGGGC...GTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp CCATGCCCAGACCATAGCACACTCGGGCACAGGGCTTGCTGCACTTCTCACACCGGGTGTTATGGTGGATaGGGGCCAGTCCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: PCPDHSTLGHRACCTSHTGCYGG*GPVHCP
Trigger: TGGGCAGTGGACTGGCCCTCATCCACCATAACACCC...GGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGTGTGCTATGGTCTGGGCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR TCA 90 bp CAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCAGGAACTGGCTGCAGTTaGCACACTGGGTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: QRLPSAVPLPTRLDPFQPGTGCS*HTGWAL
Trigger: CAGGGCCCACCCAGTGTGTCAACTGCAGCCAGTTCC...TGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp GACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGAGGAGTGGGTGCAGTTaGTGGGGCAAGGCTGGCATG +
Preference number: 4 (lower is better)
Translates to: DSPVLFLFQRGWTPSSHLRSGCS*WGKAGM
Trigger: CATGCCAGCCTTGCCCCATCAACTGCACCCACTCCT...CAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp GTACTCTGGGTTCTCTGCCGTAGGTGTCCCTTTGAAGGTGCTGGGTGGAGCCCCAGGAGTGGGTGCAGTTaGTGGGGCAAGGCTGGCATG +
Preference number: 4 (lower is better)
Translates to: VLWVLCRRCPFEGAGWSPRSGCS*WGKAGM
Trigger: CATGCCAGCCTTGCCCCATCAACTGCACCCACTCCT...GGGGCTCCACCCAGCACCTTCAAAGGGACACCTACGGCAGAGAACCCAGAGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR TCA 90 bp GACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGCATGGTTGGGACTCTTaGCCAGCACGTTCCGAGCGG +
Preference number: 4 (lower is better)
Translates to: DSPVLFLFQRGWTPSSHLHGWDS*PARSER
Trigger: CCGCTCGGAACGTGCTGGTCAAGAGTCCCAACCATG...CAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp CCCAGGTACTCTGGGTTCTCTGCCGTAGGTGTCCCTTTGAAGGTGCTGGGTGGACATCACTCTGGTGGGTaGACCGCCGGCGGAGAATGG +
Preference number: 4 (lower is better)
Translates to: PRYSGFSAVGVPLKVLGGHHSGG*TAGGEW
Trigger: CCATTCTCCGCCGGCGGTTCACCCACCAGAGTGATG...TCCACCCAGCACCTTCAAAGGGACACCTACGGCAGAGAACCCAGAGTACCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR TCA 90 bp TGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGAGTCCTCATTCTGGATaGCCACAAAGCGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: WGESLGPFQSGTSRSGSRSPHSG*PQSAGG
Trigger: ACCCCCAGCGCTTTGTGGTCATCCAGAATGAGGACT...CCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp TCCCAGGGCACCGTGTGCACGAAGCAGAGGTGGGTGTTATGGTGGATGAGGGCCGCAGCTTCATGTCTGTaGCGGTGCACACTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: SQGTVCTKQRWVLWWMRAAASCL*RCTLGC
Trigger: GCACCCAAGTGTGCACCGGCACAGACATGAAGCTGC...GGCCCTCATCCACCATAACACCCACCTCTGCTTCGTGCACACGGTGCCCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR GCA 90 bp GGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCAGTTCCAGGTTTCCCTaGACCACCTGGCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GKGQAGLWHPLDPRVSLGSSRFP*TTWQPW
Trigger: CCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGAACT...GCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GGTACTGTGGGGTCCTCACTGTACCGCTGTAGAGGGCTGGGGTCATGTGTGGGGACAATCCGCAGCCTCTaGAGTGGGACCTGCCTCACT +
Preference number: 4 (lower is better)
Translates to: GTVGSSLYRCRGLGSCVGTIRSL*SGTCLT
Trigger: AGTGAGGCAGGTCCCACTGCAGAGGCTGCGGATTGT...CCCCACACATGACCCCAGCCCTCTACAGCGGTACAGTGAGGACCCCACAGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR GCA 90 bp CTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGCACCGGCACAGACAGTaGGCGTCAGGCTCTGACAAT +
Preference number: 4 (lower is better)
Translates to: LPSAVPLPTRLDPFQPSGHRHRQ*ASGSDN
Trigger: ATTGTCAGAGCCTGACGCGCACTGTCTGTGCCGGTG...CCCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CCATTGTGCAGAATTCGTCCCCGGATTACTTGCAGGTTCTGGAAGACGCTGAGGTGGGCAGTGGCCCCTTaGAGCGGGCACAGCCACCGG +
Preference number: 4 (lower is better)
Translates to: PLCRIRPRITCRFWKTLRWAVAP*SGHSHR
Trigger: CCGGTGGCTGTGCCCGCTGCAAGGGGCCACTGCCCA...CCTCAGCGTCTTCCAGAACCTGCAAGTAATCCGGGGACGAATTCTGCACAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR GCA 90 bp CTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCGCCAGGCAGTCAGAGTaGTTGGGGCCCGTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: LRIHKDSPVLFLFQRGWTARQSE*LGPVQP
Trigger: CGGCTGCACGGGCCCCAAGCACTCTGACTGCCTGGC...GGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp TGGACCCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCCAGGCAGTCAGAGTaGTTGGGGCCCGTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: WTLESHWAGPQNPQRLPSARQSE*LGPVQP
Trigger: CGGCTGCACGGGCCCCAAGCACTCTGACTGCCTGGC...ACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp AGGGCCGCTTCCCCTCTCAGGCCAGCTTCCCTAAGGCTTTCAGTACCCAGGATCGTCACCTCTTGGTTGTaGAGGGGGCAGACGAGGGTG +
Preference number: 4 (lower is better)
Translates to: RAASPLRPASLRLSVPRIVTSWL*RGQTRV
Trigger: CACCCTCGTCTGCCCCCTGCACAACCAAGAGGTGAC...GATCCTGGGTACTGAAAGCCTTAGGGAAGCTGGCCTGAGAGGGGAAGCGGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp TTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGGGCACAGGGCTTGCTaGACTTCTCACACCGCTGTG +
Preference number: 4 (lower is better)
Translates to: FFPGERVLGLSRVAPAGRGHRAC*TSHTAV
Trigger: CACAGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCC...CCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp GGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCCTCGGGCACAGGGCTTaGTGCACTTCTCACACCGCT +
Preference number: 4 (lower is better)
Translates to: GKGQAGLWHPLDPRVSLGLGHRA*CTSHTA
Trigger: AGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAG...GCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGCTCGGGCACAGGGCTTaGTGCACTTCTCACACCGCT +
Preference number: 4 (lower is better)
Translates to: PILPWGESLGPFQSGTSRLGHRA*CTSHTA
Trigger: AGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAG...CCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp GACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGCTCGGGCACAGGGCTTaGTGCACTTCTCACACCGCT +
Preference number: 4 (lower is better)
Translates to: DSPVLFLFQRGWTPSSHLLGHRA*CTSHTA
Trigger: AGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAG...CAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCATTGGCACTGGTAACTaGCCTCACCTCTCGCAAGTG +
Preference number: 4 (lower is better)
Translates to: PWGESLGPFQSGTSRSGSIGTGN*PHLSQV
Trigger: CACTTGCGAGAGGTGAGGGCAGTTACCAGTGCCAAT...GCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCTCAAACACTTGGAGCTaGTCTGGCTGGAGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSSNTWS*SGWSGA
Trigger: TGCCCCGCTCCAGCCAGAGCAGCTCCAAGTGTTTGA...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp TCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCGTCCCCGGATTACTTaGAGGTTCTGGAAGACGCTG +
Preference number: 4 (lower is better)
Translates to: SLGRESWAFPEWHQQVGQRPRIT*RFWKTL
Trigger: CAGCGTCTTCCAGAACCTGCAAGTAATCCGGGGACG...CTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp GTTCTTAGACACTCCCTTAGGGCCGCTTCCCCTCTCAGGCCAGCTTCCCTAAGGTCCCAGGGCACCGTGTaGACGAAGCAGAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: VLRHSLRAASPLRPASLRSQGTV*TKQRWV
Trigger: CACCCACCTCTGCTTCGTGCACACGGTGCCCTGGGA...CCTTAGGGAAGCTGGCCTGAGAGGGGAAGCGGCCCTAAGGGAGTGTCTAAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp GAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCATCCCAGGGCACCGTGTaGACGAAGCAGAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: ERAKLGCGIHWTLESHWASQGTV*TKQRWV
Trigger: CACCCACCTCTGCTTCGTGCACACGGTGCCCTGGGA...TGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCTGGAGCAGAGCTTGGTaGGGGTTCCGAAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSWSRAW*GFRKSW
Trigger: CCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCA...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCCCTGGGGAGCCCCTaGAGTACTCGGCATTCCTCC +
Preference number: 4 (lower is better)
Translates to: QRLPSAVPLPTRLDPFQPSLGSP*STRHSS
Trigger: GGAGGAATGCCGAGTACTGCAGGGGCTCCCCAGGGA...TGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GGCTGGAGCGGGGCAGTGTTGGAGGCTGGGTCCCCATCAAAGCTCTCCGGCAGATTCCGGATCTTCTGCTaGCGTCGCTTGATGAGGATC +
Preference number: 4 (lower is better)
Translates to: GWSGAVLEAGSPSKLSGRFRIFC*RRLMRI
Trigger: GATCCTCATCAAGCGACGGCAGCAGAAGATCCGGAA...TCTGCCGGAGAGCTTTGATGGGGACCCAGCCTCCAACACTGCCCCGCTCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR GCA 90 bp GGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCTACTTCCGGATCTTCTaGTGCCGTCGCTTGATGAGG +
Preference number: 4 (lower is better)
Translates to: GERVLGLSRVAPAGRAAGYFRIF*CRRLMR
Trigger: CCTCATCAAGCGACGGCAGCAGAAGATCCGGAAGTA...GCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp GGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTAGCTGTGTCACCAGCTaGACCGTGGATGTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GSPGSGRRALPPLDASRSSCVTS*TVDVRQ
Trigger: CTGCCTGACATCCACGGTGCAGCTGGTGACACAGCT...ACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp AGGGCCGCTTCCCCTCTCAGGCCAGCTTCCCTAAGGCTTTCAGTACCCAGGATCGTAGATGAGCTGCGGTaGCTGTGGTGGACCATGCCC +
Preference number: 4 (lower is better)
Translates to: RAASPLRPASLRLSVPRIVDELR*LWWTMP
Trigger: GGGCATGGTCCACCACAGGCACCGCAGCTCATCTAC...GATCCTGGGTACTGAAAGCCTTAGGGAAGCTGGCCTGAGAGGGGAAGCGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp CCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTAGCCCCTTCGGAGGGTaGCAGTGGAGACCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: PRVSLGRASESTKTPQCCSPFGG*QWRPGG
Trigger: GCCCCCAGGTCTCCACTGGCACCCTCCGAAGGGGCT...ACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GCCTCCTCTTCAGAGGGCTCCAGCCCTAGTGTCAGGTCCCCACCGCCACTCCTGACACATCAGGGCTTCTaGGGACTTGGCCTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: ASSSEGSSPSVRSPPPLLTHQGF*GLGLLV
Trigger: AACCAGAAGGCCAAGTCCGCAGAAGCCCTGATGTGT...CAGGAGTGGCGGTGGGGACCTGACACTAGGGCTGGAGCCCTCTGAAGAGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR GCA 90 bp GCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAGGGTCTGAGTCTCTGTaGTGCACTGCGTTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: AGSPGSGRRALPPLDASRGSESL*CTAFVL
Trigger: CAGGACAAACGCAGTGCAGCACAGAGACTCAGACCC...TCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584601.5
CDS-3UTR CCA 90 bp GGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTTTGTCCTCAAAGAGCTaGGTGCCTCGCACAATCCGC +
Preference number: 4 (lower is better)
Translates to: GRRALPPLDASRSQAFPALSSKS*VPRTIR
Trigger: GCGGATTGTGCGAGGCACCCAGCTCTTTGAGGACAA...AGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCGGCAGTCAGAGTGCTTaGGGCCCGTGCAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: LRIHKDSPVLFLFQRGWTGSQSA*GPCSRQ
Trigger: CTGCCGGCTGCACGGGCCCCAAGCACTCTGACTGCC...GGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTGTAGGTGACCAGGGCTaGGCAGTGCAGCTCACAGAT +
Preference number: 4 (lower is better)
Translates to: GSPGSGRRALPPLDASRSVGDQG*AVQLTD
Trigger: ATCTGTGAGCTGCACTGCCCAGCCCTGGTCACCTAC...ACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCGTAGGTGACCAGGGCTaGGCAGTGCAGCTCACAGAT +
Preference number: 4 (lower is better)
Translates to: GSGRRALPPLDASRSQAFVGDQG*AVQLTD
Trigger: ATCTGTGAGCTGCACTGCCCAGCCCTGGTCACCTAC...GAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCAGGCAGTCACACAGCTaGCGCCGAATGTATACCGGC +
Preference number: 4 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSRQSHS*RRMYTG
Trigger: GCCGGTATACATTCGGCGCCAGCTGTGTGACTGCCT...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCTGGTCCCAGGAGGCAGTCACACAGCTaGCGCCGAATGTATACCGGC +
Preference number: 4 (lower is better)
Translates to: GWQCGAELGAGSERAGPRRQSHS*RRMYTG
Trigger: GCCGGTATACATTCGGCGCCAGCTGTGTGACTGCCT...CCTGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp CCGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCTGGTCCCATCTGCTGTCACCTCTTaGTTGTGCAGGGGGCAGACG +
Preference number: 4 (lower is better)
Translates to: PVGSVEQSLVRVPKELVPSAVTS*LCRGQT
Trigger: CGTCTGCCCCCTGCACAACCAAGAGGTGACAGCAGA...TGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CCA 90 bp CTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGTCTGCTGTCACCTCTTaGTTGTGCAGGGGGCAGACG +
Preference number: 4 (lower is better)
Translates to: LPSAVPLPTRLDPFQPSGSAVTS*LCRGQT
Trigger: CGTCTGCCCCCTGCACAACCAAGAGGTGACAGCAGA...CCCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGAGGTGGGTGTTATGGTaGATGAGGGCCAGTCCACTG +
Preference number: 4 (lower is better)
Translates to: PLEVVGGPSHLLMPAEVRRWVLW*MRASPL
Trigger: CAGTGGACTGGCCCTCATCCACCATAACACCCACCT...CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCACAGAGGTGGGTGTTATaGTGGATGAGGGCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: PGERVLGLSRVAPAGRAAQRWVL*WMRASP
Trigger: TGGACTGGCCCTCATCCACCATAACACCCACCTCTG...TGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp CCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCTGCACGAAGCAGAGGTaGGTGTTATGGTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: PWGESLGPFQSGTSRSGSCTKQR*VLWWMR
Trigger: CCTCATCCACCATAACACCCACCTCTGCTTCGTGCA...GCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp TTTGACGACCCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCGGCCGGTTGGCAGTGTaGAGCAGAGCTTGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: FDDPILPWGESLGPFQSGGRLAV*SRAWCG
Trigger: CCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCC...GCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGGGTCGTCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp GACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGCACACACTCGTCCTCTaGCCGGTTGGCAGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: DSPVLFLFQRGWTPSSHLHTLVL*PVGSVE
Trigger: CTCCACACTGCCAACCGGCCAGAGGACGAGTGTGTG...CAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCATGCCCAGACCATAGCACACTCGGGCACAGGGCTTGCTGCACTTCTCACACCCACACACTCGTCCTCTaGCCGGTTGGCAGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: PCPDHSTLGHRACCTSHTHTLVL*PVGSVE
Trigger: CTCCACACTGCCAACCGGCCAGAGGACGAGTGTGTG...GGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGTGTGCTATGGTCTGGGCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CCA 90 bp TCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCCCTCGGGCGCACAGCTaGTGGCAGGCCAGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: SGTVSEWVAFVLRHSLRAPRAHS*WQARPS
Trigger: CGAGGGCCTGGCCTGCCACCAGCTGTGCGCCCGAGG...GGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp GGTTCACACTGGCACGTCCAGACCCAGGTACTCTGGGTTCTCTGCCGTAGGTGTTCCTCCACGCACTCCTaGCCCCGAAGGAACTGGCTG +
Preference number: 4 (lower is better)
Translates to: GSHWHVQTQVLWVLCRRCSSTHS*PRRNWL
Trigger: CAGCCAGTTCCTTCGGGGCCAGGAGTGCGTGGAGGA...ACACCTACGGCAGAGAACCCAGAGTACCTGGGTCTGGACGTGCCAGTGTGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp CCCAGGTACTCTGGGTTCTCTGCCGTAGGTGTCCCTTTGAAGGTGCTGGGTGGATCCTCCACGCACTCCTaGCCCCGAAGGAACTGGCTG +
Preference number: 4 (lower is better)
Translates to: PRYSGFSAVGVPLKVLGGSSTHS*PRRNWL
Trigger: CAGCCAGTTCCTTCGGGGCCAGGAGTGCGTGGAGGA...TCCACCCAGCACCTTCAAAGGGACACCTACGGCAGAGAACCCAGAGTACCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp CCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCTGCGCCCTCCTCATCTaGAAACTTCCAGATGGGCAT +
Preference number: 4 (lower is better)
Translates to: PWGESLGPFQSGTSRSGSCALLI*KLPDGH
Trigger: ATGCCCATCTGGAAGTTTCCAGATGAGGAGGGCGCA...GCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp CCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCAGGTCCACACAGGAGTaGGTGCAGTTGATGGGGCAA +
Preference number: 4 (lower is better)
Translates to: PGSGRRALPPLDASRSQARSTQE*VQLMGQ
Trigger: TTGCCCCATCAACTGCACCCACTCCTGTGTGGACCT...GGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAAGGTCCACACAGGAGTaGGTGCAGTTGATGGGGCAA +
Preference number: 4 (lower is better)
Translates to: PGERVLGLSRVAPAGRAARSTQE*VQLMGQ
Trigger: TTGCCCCATCAACTGCACCCACTCCTGTGTGGACCT...TGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp CCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTGGACGTCAGAGGGCTaGCTCTCTGCTCGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: PRVSLGRASESTKTPQCCWTSEG*LSARRG
Trigger: GCCCCGCCGAGCAGAGAGCCAGCCCTCTGACGTCCA...ACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp ACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGATCCGCATCTGCGCCTaGTTGGGCATCGCTCCGCTA +
Preference number: 4 (lower is better)
Translates to: TPQCCSSSNEAGPLPAIWIRICA*LGIAPL
Trigger: TAGCGGAGCGATGCCCAACCAGGCGCAGATGCGGAT...CCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCAACCGCCGGCGGAGAATaGACTCCAGCGCCATCCACT +
Preference number: 4 (lower is better)
Translates to: ERAKLGCGIHWTLESHWATAGGE*TPAPST
Trigger: AGTGGATGGCGCTGGAGTCCATTCTCCGCCGGCGGT...TGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCCAGGTACTCTGGGTTCTCTGCCGTAGGTGTCCCTTTGAAGGTGCTGGGTGGACTCCACACATCACTCTaGTGGGTGAACCGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: PRYSGFSAVGVPLKVLGGLHTSL*WVNRRR
Trigger: CCGCCGGCGGTTCACCCACCAGAGTGATGTGTGGAG...TCCACCCAGCACCTTCAAAGGGACACCTACGGCAGAGAACCCAGAGTACCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp CCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAAGGGATCTCCCGGGCTaGGATCCCATCGTAAGGTTT +
Preference number: 4 (lower is better)
Translates to: PGERVLGLSRVAPAGRAARDLPG*DPIVRF
Trigger: AAACCTTACGATGGGATCCCAGCCCGGGAGATCCCT...TGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp CTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGGTCCAAGGGACTGGCTaGGCCCAAGTCCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: LPSAVPLPTRLDPFQPSGVQGTG*AQVLIL
Trigger: CAGAATGAGGACTTGGGCCCAGCCAGTCCCTTGGAC...CCCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTTGCTGTCCAAGGGACTaGCTGGGCCCAAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GSPGSGRRALPPLDASRSCCPRD*LGPSPH
Trigger: ATGAGGACTTGGGCCCAGCCAGTCCCTTGGACAGCA...ACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCATGGGCCTTTCCAGAGTaGCACCAGCAGGTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: ERAKLGCGIHWTLESHWAWAFPE*HQQVGQ
Trigger: CTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCA...TGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TCCTTTCAAGATCTCTGTGAGGCTTCGAAGCTGCAGCTCCCGCAGGCCTCCTGGTGGGCCTTTCCAGAGTaGCACCAGCAGGTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: SFQDLCEASKLQLPQASWWAFPE*HQQVGQ
Trigger: CTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCA...CCAGGAGGCCTGCGGGAGCTGCAGCTTCGAAGCCTCACAGAGATCTTGAAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp ATGGCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCGGCTGTGGCATCCACTaGACCCTAGAGTCTCATTGG +
Preference number: 4 (lower is better)
Translates to: MAGSPGSGRRALPPLDASGCGIH*TLESHW
Trigger: CCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCC...GCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCGGCTGTGGCATCCACTaGACCCTAGAGTCTCATTGG +
Preference number: 4 (lower is better)
Translates to: PGSGRRALPPLDASRSQAGCGIH*TLESHW
Trigger: CCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCC...GGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTGGCTGTGGCATCCACTaGACCCTAGAGTCTCATTGG +
Preference number: 4 (lower is better)
Translates to: GRRALPPLDASRSQAFPAGCGIH*TLESHW
Trigger: CCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCC...AGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAAAGGATGGCCGGCCTaGCGGCGCGGTTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SLGRASESTKTPQCCSSSKGWPA*RRGWSC
Trigger: GCAGGACCAACCGCGCCGCCAGGCCGGCCATCCTTT...GGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584601.5
3UTR CAA 72 bp CACAATCCGCAGCCTCTGCAGTGGGACCTGCCTCACTaGGTTGTGAGCGATGAGCACGTAGCCCTGCACCTC +
Preference number: 4 (lower is better)
Translates to: HNPQPLQWDLPH*VVSDEHVALHL
Trigger: GAGGTGCAGGGCTACGTGCTCATCGCTCACAACCAAGTGAGGCAGGTCCCACTGCAGAGGCTGCGGATTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR TCA 90 bp GGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCTGGTGGGCAGGTAGGTaGGTTCCAGGTTTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: GKGQAGLWHPLDPRVSLGWWAGR*VPGFPA
Trigger: TGCAGGGAAACCTGGAACTCACCTACCTGCCCACCA...GCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp CCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCTGGTGTCTATCAGTGTaGGAGCCAGCTGGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: PWGESLGPFQSGTSRSGSWCLSV*EPAGCS
Trigger: AGAACAACCAGCTGGCTCTCACACTGATAGACACCA...GCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR TCA 90 bp GGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCGTGCGCGTCAGGCTCTaGCAATCCTCAGAACTCTCT +
Preference number: 4 (lower is better)
Translates to: GSGRRALPPLDASRSQAFVRVRL*QSSELS
Trigger: AGAGAGTTCTGAGGATTGTCAGAGCCTGACGCGCAC...GAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp TCACACTGGCACGTCCAGACCCAGGTACTCTGGGTTCTCTGCCGTAGGTGTCCCTGTCTGTGTTGTAGGTaGCCAGGGCTGGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: SHWHVQTQVLWVLCRRCPCLCCR*PGLGSA
Trigger: TGCACTGCCCAGCCCTGGTCACCTACAACACAGACA...GGGACACCTACGGCAGAGAACCCAGAGTACCTGGGTCTGGACGTGCCAGTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR TCA 90 bp TGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGGGTTCTGGAAGACGCTaGGGTCAGGCAGGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: WAGPQNPQRLPSAVPLPTGSGRR*GQAGCP
Trigger: CGGACAGCCTGCCTGACCTCAGCGTCTTCCAGAACC...CGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp CCCAGGTACTCTGGGTTCTCTGCCGTAGGTGTCCCTTTGAAGGTGCTGGGTGGAGGGTGTTATGGTGGATaGGGGCCAGTCCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: PRYSGFSAVGVPLKVLGGGCYGG*GPVHCP
Trigger: TGGGCAGTGGACTGGCCCTCATCCACCATAACACCC...TCCACCCAGCACCTTCAAAGGGACACCTACGGCAGAGAACCCAGAGTACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR TCA 90 bp CCGGCCCTCGGGATTGGGCATGGACTCAAACGTGTCTGTGTTGTAGGTGACCAGCAACCACCGCAGAGATaGTGGACGTCAGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PALGIGHGLKRVCVVGDQQPPQR*WTSEGW
Trigger: CCAGCCCTCTGACGTCCATCATCTCTGCGGTGGTTG...CTGGTCACCTACAACACAGACACGTTTGAGTCCATGCCCAATCCCGAGGGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR TCA 90 bp CAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCACATGGTTGGGACTCTTaGCCAGCACGTTCCGAGCGG +
Preference number: 4 (lower is better)
Translates to: QRLPSAVPLPTRLDPFQPHGWDS*PARSER
Trigger: CCGCTCGGAACGTGCTGGTCAAGAGTCCCAACCATG...TGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp TTTGACGACCCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCCATCACTCTGGTGGGTaGACCGCCGGCGGAGAATGG +
Preference number: 4 (lower is better)
Translates to: FDDPILPWGESLGPFQSGHHSGG*TAGGEW
Trigger: CCATTCTCCGCCGGCGGTTCACCCACCAGAGTGATG...GCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGGGTCGTCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR TCA 90 bp AGGGCCGCTTCCCCTCTCAGGCCAGCTTCCCTAAGGCTTTCAGTACCCAGGATCATCGTCCTCCAGCAGTaGGCGGTAGAAGGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: RAASPLRPASLRLSVPRIIVLQQ*AVEGAV
Trigger: GACAGCACCTTCTACCGCTCACTGCTGGAGGACGAT...GATCCTGGGTACTGAAAGCCTTAGGGAAGCTGGCCTGAGAGGGGAAGCGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR TCA 90 bp GACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGATCGTCCTCCAGCAGTaGGCGGTAGAAGGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: DSPVLFLFQRGWTPSSHLIVLQQ*AVEGAV
Trigger: GACAGCACCTTCTACCGCTCACTGCTGGAGGACGAT...CAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp TCACACTGGCACGTCCAGACCCAGGTACTCTGGGTTCTCTGCCGTAGGTGTCCCATCGTCCTCCAGCAGTaGGCGGTAGAAGGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: SHWHVQTQVLWVLCRRCPIVLQQ*AVEGAV
Trigger: GACAGCACCTTCTACCGCTCACTGCTGGAGGACGAT...GGGACACCTACGGCAGAGAACCCAGAGTACCTGGGTCTGGACGTGCCAGTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp AGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTCTCCATGGTGCTCACTaGGGCTCCGGCCCCATGGCT +
Preference number: 4 (lower is better)
Translates to: RIHKDSPVLFLFQRGWTPLHGAH*GSGPMA
Trigger: AGCCATGGGGCCGGAGCCGCAGTGAGCACCATGGAG...AGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269571.10
ENST00000578373.5
CDS-3UTR GCA 90 bp GGACCCCTTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACACTCCATGGTGCTCACTaGGGCTCCGGCCCCATGGCT +
Preference number: 4 (lower is better)
Translates to: GPLPAIWELKQEGRFLRTLHGAH*GSGPMA
Trigger: AGCCATGGGGCCGGAGCCGCAGTGAGCACCATGGAG...TGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269571.10
ENST00000578373.5
CDS-3UTR GCA 90 bp CTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGACCTCCTGGATATCCTaGAGGAAGGACAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LPSAVPLPTRLDPFQPSGTSWIS*RKDRLA
Trigger: TGCCAGCCTGTCCTTCCTGCAGGATATCCAGGAGGT...CCCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCACAATCCGCAGCCTCTaGAGTGGGACCTGCCTCACT +
Preference number: 4 (lower is better)
Translates to: GKGQAGLWHPLDPRVSLGTIRSL*SGTCLT
Trigger: AGTGAGGCAGGTCCCACTGCAGAGGCTGCGGATTGT...GCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp TTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGCACCGGCACAGACAGTaGGCGTCAGGCTCTGACAAT +
Preference number: 4 (lower is better)
Translates to: FFPGERVLGLSRVAPAGRHRHRQ*ASGSDN
Trigger: ATTGTCAGAGCCTGACGCGCACTGTCTGTGCCGGTG...CCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp TTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACAGTGCTTGGGGCCCGTaGAGCCGGCAGCACACTGCT +
Preference number: 4 (lower is better)
Translates to: LGRASESTKTPQCCSSSNSAWGP*SRQHTA
Trigger: AGCAGTGTGCTGCCGGCTGCACGGGCCCCAAGCACT...GTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGGTCACCTCTTGGTTGTaGAGGGGGCAGACGAGGGTG +
Preference number: 4 (lower is better)
Translates to: PQRLPSAVPLPTRLDPFQVTSWL*RGQTRV
Trigger: CACCCTCGTCTGCCCCCTGCACAACCAAGAGGTGAC...CTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCAGTCACCTCTTGGTTGTaGAGGGGGCAGACGAGGGTG +
Preference number: 4 (lower is better)
Translates to: ERAKLGCGIHWTLESHWAVTSWL*RGQTRV
Trigger: CACCCTCGTCTGCCCCCTGCACAACCAAGAGGTGAC...TGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCCCCTGTGTTCCATCCTCTaGTGTCACCTCTTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: RRALPPLDASRSQAFPAPLCSIL*CHLLVV
Trigger: CACAACCAAGAGGTGACAGCAGAGGATGGAACACAG...GGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGGGGCACAGGGCTTGCTaGACTTCTCACACCGCTGTG +
Preference number: 4 (lower is better)
Translates to: PQRLPSAVPLPTRLDPFQGHRAC*TSHTAV
Trigger: CACAGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCC...CTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGCTCGCAAGTGCTCCATaGCCAGACCATAGCACACTC +
Preference number: 4 (lower is better)
Translates to: LPSAVPLPTRLDPFQPSGLASAP*PDHSTL
Trigger: GAGTGTGCTATGGTCTGGGCATGGAGCACTTGCGAG...CCCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GTGTGGAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCTGGTCCCAGGGCACCGTGATTGGCACTGGTAACTaGCCTCACCTCTCGCAAGTG +
Preference number: 4 (lower is better)
Translates to: VWSRAWCGFRKSWSQGTVIGTGN*PHLSQV
Trigger: CACTTGCGAGAGGTGAGGGCAGTTACCAGTGCCAAT...CACGGTGCCCTGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR GCA 90 bp ATGGCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCGCTCTCCGGCAGAAATaGCAGGCTCCCAAAGATCTT +
Preference number: 4 (lower is better)
Translates to: MAGSPGSGRRALPPLDASALRQK*QAPKDL
Trigger: AAGATCTTTGGGAGCCTGGCATTTCTGCCGGAGAGC...GCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCAGCTCTCCGGCAGAAATaGCAGGCTCCCAAAGATCTT +
Preference number: 4 (lower is better)
Translates to: GRESWAFPEWHQQVGQQAALRQK*QAPKDL
Trigger: AAGATCTTTGGGAGCCTGGCATTTCTGCCGGAGAGC...TGCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp GATATTGGCACTGGTAACTGCCCTCACCTCTCGCAAGTGCTCCATGCCCAGACCTCCCAGGGCACCGTGTaGACGAAGCAGAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: DIGTGNCPHLSQVLHAQTSQGTV*TKQRWV
Trigger: CACCCACCTCTGCTTCGTGCACACGGTGCCCTGGGA...GGTCTGGGCATGGAGCACTTGCGAGAGGTGAGGGCAGTTACCAGTGCCAATATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR GCA 90 bp TCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCCCTGGACCCCAGCAGTaGCCTCGGGCGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: SGTVSEWVAFVLRHSLRAPGPQQ*PRAHSW
Trigger: CCAGCTGTGCGCCCGAGGGCACTGCTGGGGTCCAGG...GGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp CCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCATGGCACGGCAAACAGTaGCTGGCATTCACATACTCC +
Preference number: 4 (lower is better)
Translates to: PGERVLGLSRVAPAGRAAWHGKQ*LAFTYS
Trigger: GGAGTATGTGAATGCCAGGCACTGTTTGCCGTGCCA...TGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp CCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGTGGCACGGCAAACAGTaGCTGGCATTCACATACTCC +
Preference number: 4 (lower is better)
Translates to: PLEVVGGPSHLLMPAEVRWHGKQ*LAFTYS
Trigger: GGAGTATGTGAATGCCAGGCACTGTTTGCCGTGCCA...CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCAGGGCCTTCCGGATCTTCTGCTaGCGTCGCTTGATGAGGATC +
Preference number: 4 (lower is better)
Translates to: GQAGLWHPLDPRVSLGRAFRIFC*RRLMRI
Trigger: GATCCTCATCAAGCGACGGCAGCAGAAGATCCGGAA...GGCCCTGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGACCAGCTCCGTTTCCTaGAGCAGTCTCCGCATCGTG +
Preference number: 4 (lower is better)
Translates to: PILPWGESLGPFQSGTSRTSSVS*SSLRIV
Trigger: CACGATGCGGAGACTGCTGCAGGAAACGGAGCTGGT...CCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp GGTACTGTGGGGTCCTCACTGTACCGCTGTAGAGGGCTGGGGTCATGTGTGGGGTGGATGTCAGGCAGATaGCCAGAAGGCGGGAGACAT +
Preference number: 4 (lower is better)
Translates to: GTVGSSLYRCRGLGSCVGWMSGR*PEGGRH
Trigger: ATGTCTCCCGCCTTCTGGGCATCTGCCTGACATCCA...CCCCACACATGACCCCAGCCCTCTACAGCGGTACAGTGAGGACCCCACAGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR GCA 90 bp GTACTCTGGGTTCTCTGCCGTAGGTGTCCCTTTGAAGGTGCTGGGTGGAGCCCCAGCTGTGTCACCAGCTaGACCGTGGATGTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VLWVLCRRCPFEGAGWSPSCVTS*TVDVRQ
Trigger: CTGCCTGACATCCACGGTGCAGCTGGTGACACAGCT...GGGGCTCCACCCAGCACCTTCAAAGGGACACCTACGGCAGAGAACCCAGAGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp ACCCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGGGGTCCCTGGCCATaGGGGAGAATTCAGACACCA +
Preference number: 4 (lower is better)
Translates to: TPFFPGERVLGLSRVAPAGGPWP*GRIQTP
Trigger: TGGTGTCTGAATTCTCCCGCATGGCCAGGGACCCCC...TGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCGGACAGAAGAAGCCCTaGTGGGGTACCAGATACTCC +
Preference number: 4 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSGQKKP*WGTRYS
Trigger: GGAGTATCTGGTACCCCAGCAGGGCTTCTTCTGTCC...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp TCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCTGTGTGGGGAGGCTTTaGAGCCCCTTGGCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: SLGRASESTKTPQCCSSSCVGRL*SPLAAP
Trigger: GGGGGCAGCCAAGGGGCTGCAAAGCCTCCCCACACA...GGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAACACATCAGGGCTTCTaGGGACTTGGCCTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: AGSPGSGRRALPPLDASRTHQGF*GLGLLV
Trigger: AACCAGAAGGCCAAGTCCGCAGAAGCCCTGATGTGT...TCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAGGTGGGTCTCGGGACTaGCAGGGAGCCGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: HWAGPQNPQRLPSAVPLPGGSRD*QGAAAS
Trigger: TGAAGCTGCGGCTCCCTGCCAGTCCCGAGACCCACC...TGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGGTGGGTCTCGGGACTaGCAGGGAGCCGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LGRASESTKTPQCCSSSNGGSRD*QGAAAS
Trigger: TGAAGCTGCGGCTCCCTGCCAGTCCCGAGACCCACC...GTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCCTCCCGCAGGCCTCCTaGGGAGGCCCCTGTGACAGG +
Preference number: 4 (lower is better)
Translates to: SGTVSEWVAFVLRHSLRALPQAS*GGPCDR
Trigger: CCTGTCACAGGGGCCTCCCCAGGAGGCCTGCGGGAG...GGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp ACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGAGCTGGGGGTTCCGCTaGATCAAGACCCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: TPQCCSSSNEAGPLPAIWSWGFR*IKTPPF
Trigger: GAAAGGAGGGGTCTTGATCCAGCGGAACCCCCAGCT...CCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGCAGTCAGTGGGCAGTaGCCCCTTGCAGCGGGCACA +
Preference number: 4 (lower is better)
Translates to: LGRASESTKTPQCCSSSNAVSGQ*PLAAGT
Trigger: TGTGCCCGCTGCAAGGGGCCACTGCCCACTGACTGC...GTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGTAGGTGACCAGGGCTaGGCAGTGCAGCTCACAGAT +
Preference number: 4 (lower is better)
Translates to: DSPVLFLFQRGWTPSSHLVGDQG*AVQLTD
Trigger: ATCTGTGAGCTGCACTGCCCAGCCCTGGTCACCTAC...CAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp ACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGTAGGTGACCAGGGCTaGGCAGTGCAGCTCACAGAT +
Preference number: 4 (lower is better)
Translates to: TPQCCSSSNEAGPLPAIWVGDQG*AVQLTD
Trigger: ATCTGTGAGCTGCACTGCCCAGCCCTGGTCACCTAC...CCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCACCTCGGGATTGGGCATaGACTCAAACGTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: GRESWAFPEWHQQVGQQAPRDWA*TQTCLC
Trigger: ACACAGACACGTTTGAGTCCATGCCCAATCCCGAGG...TGCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp GACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGACCGGCCCTCGGGATTaGGCATGGACTCAAACGTGT +
Preference number: 4 (lower is better)
Translates to: DSPVLFLFQRGWTPSSHLTGPRD*AWTQTC
Trigger: ACACGTTTGAGTCCATGCCCAATCCCGAGGGCCGGT...CAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GTACTCTGGGTTCTCTGCCGTAGGTGTCCCTTTGAAGGTGCTGGGTGGAGCCCCACCGGCCCTCGGGATTaGGCATGGACTCAAACGTGT +
Preference number: 4 (lower is better)
Translates to: VLWVLCRRCPFEGAGWSPTGPRD*AWTQTC
Trigger: ACACGTTTGAGTCCATGCCCAATCCCGAGGGCCGGT...GGGGCTCCACCCAGCACCTTCAAAGGGACACCTACGGCAGAGAACCCAGAGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp TTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGAGGCAGTCACACAGCTaGCGCCGAATGTATACCGGC +
Preference number: 4 (lower is better)
Translates to: FFPGERVLGLSRVAPAGRRQSHS*RRMYTG
Trigger: GCCGGTATACATTCGGCGCCAGCTGTGTGACTGCCT...CCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp GGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCTCTGCTGTCACCTCTTaGTTGTGCAGGGGGCAGACG +
Preference number: 4 (lower is better)
Translates to: GKGQAGLWHPLDPRVSLGSAVTS*LCRGQT
Trigger: CGTCTGCCCCCTGCACAACCAAGAGGTGACAGCAGA...GCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGGGCAGTGTTGGAGGCTaGGTCCCCATCAAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: PILPWGESLGPFQSGTSRGSVGG*VPIKAL
Trigger: GAGAGCTTTGATGGGGACCCAGCCTCCAACACTGCC...CCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp TGGAAGGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGAGCTGCTCTGGCTaGAGCGGGGCAGTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: WKERAKLGCGIHWTLESHWSCSG*SGAVLE
Trigger: CTCCAACACTGCCCCGCTCCAGCCAGAGCAGCTCCA...ATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGTGGAGCTGCTCTGGCTaGAGCGGGGCAGTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: WAGPQNPQRLPSAVPLPTWSCSG*SGAVLE
Trigger: CTCCAACACTGCCCCGCTCCAGCCAGAGCAGCTCCA...CGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTAGAGTCTCAAACACTTaGAGCTGCTCTGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GRRALPPLDASRSQAFPARVSNT*SCSGWS
Trigger: GCTCCAGCCAGAGCAGCTCCAAGTGTTTGAGACTCT...AGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TGCTCTGGCTGGAGCGGGGCAGTGTTGGAGGCTGGGTCCCCATCAAAGCTCTCCAGAGTCTCAAACACTTaGAGCTGCTCTGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: CSGWSGAVLEAGSPSKLSRVSNT*SCSGWS
Trigger: GCTCCAGCCAGAGCAGCTCCAAGTGTTTGAGACTCT...GGAGAGCTTTGATGGGGACCCAGCCTCCAACACTGCCCCGCTCCAGCCAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CCA 90 bp GGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCAGGTGGGTGTTATGGTaGATGAGGGCCAGTCCACTG +
Preference number: 4 (lower is better)
Translates to: GSGRRALPPLDASRSQAFRWVLW*MRASPL
Trigger: CAGTGGACTGGCCCTCATCCACCATAACACCCACCT...GAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TCACACTGGCACGTCCAGACCCAGGTACTCTGGGTTCTCTGCCGTAGGTGTCCCGTGTGGAGCAGAGCTTaGTGCGGGTTCCGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: SHWHVQTQVLWVLCRRCPVWSRA*CGFRKS
Trigger: GCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACAC...GGGACACCTACGGCAGAGAACCCAGAGTACCTGGGTCTGGACGTGCCAGTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp TCGCAAGTGCTCCATGCCCAGACCATAGCACACTCGGGCACAGGGCTTGCTGCAGTGTGGAGCAGAGCTTaGTGCGGGTTCCGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: SQVLHAQTIAHSGTGLAAVWSRA*CGFRKS
Trigger: GCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACAC...TGCAGCAAGCCCTGTGCCCGAGTGTGCTATGGTCTGGGCATGGAGCACTTGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CCA 90 bp TTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGGCCGGTTGGCAGTGTaGAGCAGAGCTTGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: LGRASESTKTPQCCSSSNGRLAV*SRAWCG
Trigger: CCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCC...GTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TGGACCCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGGCCGGTTGGCAGTGTaGAGCAGAGCTTGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: WTLESHWAGPQNPQRLPSGRLAV*SRAWCG
Trigger: CCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCC...ACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCGTCCTCTGGCCGGTTaGCAGTGTGGAGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: PQRLPSAVPLPTRLDPFQRPLAG*QCGAEL
Trigger: AAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACG...CTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TCCTTTCAAGATCTCTGTGAGGCTTCGAAGCTGCAGCTCCCGCAGGCCTCCTGGCGTCCTCTGGCCGGTTaGCAGTGTGGAGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: SFQDLCEASKLQLPQASWRPLAG*QCGAEL
Trigger: AAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACG...CCAGGAGGCCTGCGGGAGCTGCAGCTTCGAAGCCTCACAGAGATCTTGAAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp ACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGTGGCCCCGAAGGAACTaGCTGCAGTTGACACACTGG +
Preference number: 4 (lower is better)
Translates to: TPQCCSSSNEAGPLPAIWWPRRN*LQLTHW
Trigger: CCAGTGTGTCAACTGCAGCCAGTTCCTTCGGGGCCA...CCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCATTCACATACTCCCTaGGGAGCCCCTGCAGTACTC +
Preference number: 4 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSHSHTP*GAPAVL
Trigger: GAGTACTGCAGGGGCTCCCCAGGGAGTATGTGAATG...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CAGCCAGCTGATGCCCAGCCCTTGCAGGGTCAGCGAGTAGGCGCCATTGTGCAGACGGCAAACAGTGCCTaGCATTCACATACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: QPADAQPLQGQRVGAIVQTANSA*HSHTPW
Trigger: CCAGGGAGTATGTGAATGCCAGGCACTGTTTGCCGT...CTGCACAATGGCGCCTACTCGCTGACCCTGCAAGGGCTGGGCATCAGCTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp TCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGACGGCAAACAGTGCCTaGCATTCACATACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: SLGRESWAFPEWHQQVGQTANSA*HSHTPW
Trigger: CCAGGGAGTATGTGAATGCCAGGCACTGTTTGCCGT...CTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp GGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCGCACAGGCCACACACTaGTCAGCCTCCGGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: GKGQAGLWHPLDPRVSLGAQATH*SASGPK
Trigger: TTTTGGACCGGAGGCTGACCAGTGTGTGGCCTGTGC...GCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACCAGGTTTCACACCGCTaGGGCAGCGGGCCACGCAGA +
Preference number: 4 (lower is better)
Translates to: LGRASESTKTPQCCSSSNQVSHR*GSGPRR
Trigger: TCTGCGTGGCCCGCTGCCCCAGCGGTGTGAAACCTG...GTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp AGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCCAGGTTTCACACCGCTaGGGCAGCGGGCCACGCAGA +
Preference number: 4 (lower is better)
Translates to: SLIGQGLRIHKDSPVLFLQVSHR*GSGPRR
Trigger: TCTGCGTGGCCCGCTGCCCCAGCGGTGTGAAACCTG...GAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TGGAAGGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATCTCCACACATCACTCTaGTGGGTGAACCGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: WKERAKLGCGIHWTLESHLHTSL*WVNRRR
Trigger: CCGCCGGCGGTTCACCCACCAGAGTGATGTGTGGAG...ATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCCTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGAGGGATCTCCCGGGCTaGGATCCCATCGTAAGGTTT +
Preference number: 4 (lower is better)
Translates to: LPSAVPLPTRLDPFQPSGRDLPG*DPIVRF
Trigger: AAACCTTACGATGGGATCCCAGCCCGGGAGATCCCT...CCCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp ATGGCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCCCCAAGTCCTCATTCTaGATGACCACAAAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: MAGSPGSGRRALPPLDASPKSSF*MTTKRW
Trigger: CCAGCGCTTTGTGGTCATCCAGAATGAGGACTTGGG...GCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCCAAGTCCTCATTCTaGATGACCACAAAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: PLEVVGGPSHLLMPAEVRPKSSF*MTTKRW
Trigger: CCAGCGCTTTGTGGTCATCCAGAATGAGGACTTGGG...CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCACGCAGAAGGGAGGGTCCTTATAGTGGGCACAGGCCACACACTGGTCAGCCTGTCCAAGGGACTGGCTaGGCCCAAGTCCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: PRRREGPYSGHRPHTGQPVQGTG*AQVLIL
Trigger: CAGAATGAGGACTTGGGCCCAGCCAGTCCCTTGGAC...AGGCTGACCAGTGTGTGGCCTGTGCCCACTATAAGGACCCTCCCTTCTGCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp ACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGTGCTGTCCAAGGGACTaGCTGGGCCCAAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: TPQCCSSSNEAGPLPAIWCCPRD*LGPSPH
Trigger: ATGAGGACTTGGGCCCAGCCAGTCCCTTGGACAGCA...CCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCATGCCCAGACCATAGCACACTCGGGCACAGGGCTTGCTGCACTTCTCACACCTGCTGTCCAAGGGACTaGCTGGGCCCAAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PCPDHSTLGHRACCTSHTCCPRD*LGPSPH
Trigger: ATGAGGACTTGGGCCCAGCCAGTCCCTTGGACAGCA...GGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGTGTGCTATGGTCTGGGCATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp CCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTGCTGTCCAAGGGACTaGCTGGGCCCAAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PILPWGESLGPFQSGTSRCCPRD*LGPSPH
Trigger: ATGAGGACTTGGGCCCAGCCAGTCCCTTGGACAGCA...CCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp GCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGACAGAAGAAGCCCTGCTaGGGTACCAGATACTCCTCA +
Preference number: 4 (lower is better)
Translates to: AGSPGSGRRALPPLDASRQKKPC*GTRYSS
Trigger: TGAGGAGTATCTGGTACCCCAGCAGGGCTTCTTCTG...TCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCAGAAGAAGCCCTGCTaGGGTACCAGATACTCCTCA +
Preference number: 4 (lower is better)
Translates to: WGESLGPFQSGTSRSGSRQKKPC*GTRYSS
Trigger: TGAGGAGTATCTGGTACCCCAGCAGGGCTTCTTCTG...CCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp TTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAGGTTCCTCTGCGGTGCCTGTGGTaGACCATGCCCCCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: FQPSGNSSRKEGSLGQVPLRCLW*TMPPAP
Trigger: GGGCGCTGGGGGCATGGTCCACCACAGGCACCGCAG...AGGAACCTGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCATTCGGAGGGTGCCAGTaGAGACCTGGGGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: HWAGPQNPQRLPSAVPLPFGGCQ*RPGGLL
Trigger: GAGGAGGCCCCCAGGTCTCCACTGGCACCCTCCGAA...TGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp AGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCGGAGGGTGCCAGTaGAGACCTGGGGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SLIGQGLRIHKDSPVLFLFGGCQ*RPGGLL
Trigger: GAGGAGGCCCCCAGGTCTCCACTGGCACCCTCCGAA...GAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp ATGGCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCGGCCGAACATCTGGCTaGTTCACATATTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: MAGSPGSGRRALPPLDASGRTSG*FTYSGW
Trigger: CCAGCCTGAATATGTGAACCAGCCAGATGTTCGGCC...GCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCGACCCCATTCTTCCCTaGGGAGAGAGTCTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GKGQAGLWHPLDPRVSLGDPILP*GESLGP
Trigger: AGGCCCAAGACTCTCTCCCCAGGGAAGAATGGGGTC...GCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGGGGCAGCTCCTCCCTaGGGTGTCAAGTACTCGGGG +
Preference number: 4 (lower is better)
Translates to: LGRASESTKTPQCCSSSNGAAPP*GVKYSG
Trigger: CCCCGAGTACTTGACACCCCAGGGAGGAGCTGCCCC...GTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TGGACCCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGGGGCAGCTCCTCCCTaGGGTGTCAAGTACTCGGGG +
Preference number: 4 (lower is better)
Translates to: WTLESHWAGPQNPQRLPSGAAPP*GVKYSG
Trigger: CCCCGAGTACTTGACACCCCAGGGAGGAGCTGCCCC...ACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGCCTTCTGGTTCACACTaGCACGTCCAGACCCAGGTA +
Preference number: 4 (lower is better)
Translates to: LPSAVPLPTRLDPFQPSGPSGSH*HVQTQV
Trigger: TACCTGGGTCTGGACGTGCCAGTGTGAACCAGAAGG...CCCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp ACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGCGGACTTGGCCTTCTaGTTCACACTGGCACGTCCA +
Preference number: 4 (lower is better)
Translates to: TPQCCSSSNEAGPLPAIWADLAF*FTLARP
Trigger: TGGACGTGCCAGTGTGAACCAGAAGGCCAAGTCCGC...CCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGGCTTCTGCGGACTTaGCCTTCTGGTTCACACTGG +
Preference number: 4 (lower is better)
Translates to: DSPVLFLFQRGWTPSSHLGLLRT*PSGSHW
Trigger: CCAGTGTGAACCAGAAGGCCAAGTCCGCAGAAGCCC...CAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCAGGGCCACCCTAGAGTCTCATTaGGCAGGGCCTCAGAATCCA +
Preference number: 4 (lower is better)
Translates to: GQAGLWHPLDPRVSLGRATLESH*AGPQNP
Trigger: TGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGT...GGCCCTGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCAGGGCCTGCAAATGGACAAAGTaGGTGTGGAGAAGGACCCCC +
Preference number: 4 (lower is better)
Translates to: GQAGLWHPLDPRVSLGRACKWTK*VWRRTP
Trigger: GGGGGTCCTTCTCCACACCCACTTTGTCCATTTGCA...GGCCCTGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
3UTR CAA 72 bp CACATCGGAGAACAGGGGTGGCAGGCCCGAGAGCGGTaGGTGTCTATCAGTGTGAGAGCCAGCTGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: HIGEQGWQARER*VSISVRASWLF
Trigger: GAACAACCAGCTGGCTCTCACACTGATAGACACCAACCGCTCTCGGGCCTGCCACCCCTGTTCTCCGATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR TCA 90 bp GGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCTTTCAAGATCTCTGTaGGGCTTCGAAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GRRALPPLDASRSQAFPALSRSL*GFEAAA
Trigger: AGCTGCAGCTTCGAAGCCTCACAGAGATCTTGAAAG...AGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp GGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCACTTTCAAGATCTCTGTaGGGCTTCGAAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GRESWAFPEWHQQVGQQALSRSL*GFEAAA
Trigger: AGCTGCAGCTTCGAAGCCTCACAGAGATCTTGAAAG...TGCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR TCA 90 bp GCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGATGGTGTCTATCAGTGTaGGAGCCAGCTGGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: AGSPGSGRRALPPLDASRWCLSV*EPAGCS
Trigger: AGAACAACCAGCTGGCTCTCACACTGATAGACACCA...TCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp GGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCGTGCGCGTCAGGCTCTaGCAATCCTCAGAACTCTCT +
Preference number: 4 (lower is better)
Translates to: GKGQAGLWHPLDPRVSLGVRVRL*QSSELS
Trigger: AGAGAGTTCTGAGGATTGTCAGAGCCTGACGCGCAC...GCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp GAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCATGTCTGTGTTGTAGGTaGCCAGGGCTGGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: ERAKLGCGIHWTLESHWACLCCR*PGLGSA
Trigger: TGCACTGCCCAGCCCTGGTCACCTACAACACAGACA...TGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp CCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTGGAACTGGCTGCAGTTaGCACACTGGGTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PRVSLGRASESTKTPQCCGTGCS*HTGWAL
Trigger: CAGGGCCCACCCAGTGTGTCAACTGCAGCCAGTTCC...ACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp CTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTCCCCTCTCAGAGCCATTCTGGGGCTaGCACTCAGGGTGGCACGGC +
Preference number: 4 (lower is better)
Translates to: LNGSLLFLDTPLGPLPLSEPFWG*HSGWHG
Trigger: GCCGTGCCACCCTGAGTGTCAGCCCCAGAATGGCTC...TGAGAGGGGAAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR TCA 90 bp GGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTTCCAAAACAGGTCACTaGGCCATTCTGGGGCTGACA +
Preference number: 4 (lower is better)
Translates to: GSPGSGRRALPPLDASRSSKTGH*AILGLT
Trigger: TGTCAGCCCCAGAATGGCTCAGTGACCTGTTTTGGA...ACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp GCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGGCAAAAACGTCTTTaGCGACCCCATTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: AGSPGSGRRALPPLDASRRQKRL*RPHSSL
Trigger: CAGGGAAGAATGGGGTCGTCAAAGACGTTTTTGCCT...TCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp TCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGAGGCAAAAACGTCTTTaGCGACCCCATTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SLGRESWAFPEWHQQVGQRQKRL*RPHSSL
Trigger: CAGGGAAGAATGGGGTCGTCAAAGACGTTTTTGCCT...CTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR TCA 90 bp ATGGCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCCCCCCGTTTTATCTGTaGCTCTTTGCTCAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: MAGSPGSGRRALPPLDASPPFYL*LFAQGV
Trigger: TACTCCCTGAGCAAAGAGTCACAGATAAAACGGGGG...GCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGCCAT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584601.5
CDS-3UTR TCA 90 bp CCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGCATATTCCTGGTAGATaGGCTGCGGTGCCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: PILPWGESLGPFQSGTSRHIPGR*AAVPVV
Trigger: CACCACAGGCACCGCAGCTCATCTACCAGGAATATG...CCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584450.5
CDS-3UTR GCA 90 bp TGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGTTCCAGGTTTCCCTaGACCACCTGGCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: WAGPQNPQRLPSAVPLPTSSRFP*TTWQPW
Trigger: CCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGAACT...CGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGACTGTGTTCCATCCTCTaGTGTCACCTCTTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: AGSPGSGRRALPPLDASRLCSIL*CHLLVV
Trigger: CACAACCAAGAGGTGACAGCAGAGGATGGAACACAG...TCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCAGGGCCCTGTGTTCCATCCTCTaGTGTCACCTCTTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: GQAGLWHPLDPRVSLGRALCSIL*CHLLVV
Trigger: CACAACCAAGAGGTGACAGCAGAGGATGGAACACAG...GGCCCTGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp AACTGCCCTCACCTCTCGCAAGTGCTCCATGCCCAGACCATAGCACACTCGGGCCTCGCAAGTGCTCCATaGCCAGACCATAGCACACTC +
Preference number: 4 (lower is better)
Translates to: NCPHLSQVLHAQTIAHSGLASAP*PDHSTL
Trigger: GAGTGTGCTATGGTCTGGGCATGGAGCACTTGCGAG...GCCCGAGTGTGCTATGGTCTGGGCATGGAGCACTTGCGAGAGGTGAGGGCAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR GCA 90 bp GTACTCTGGGTTCTCTGCCGTAGGTGTCCCTTTGAAGGTGCTGGGTGGAGCCCCCTCGCAAGTGCTCCATaGCCAGACCATAGCACACTC +
Preference number: 4 (lower is better)
Translates to: VLWVLCRRCPFEGAGWSPLASAP*PDHSTL
Trigger: GAGTGTGCTATGGTCTGGGCATGGAGCACTTGCGAG...GGGGCTCCACCCAGCACCTTCAAAGGGACACCTACGGCAGAGAACCCAGAGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp GGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCATTGGCACTGGTAACTaGCCTCACCTCTCGCAAGTG +
Preference number: 4 (lower is better)
Translates to: GSGRRALPPLDASRSQAFIGTGN*PHLSQV
Trigger: CACTTGCGAGAGGTGAGGGCAGTTACCAGTGCCAAT...GAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp AGGGCCGCTTCCCCTCTCAGGCCAGCTTCCCTAAGGCTTTCAGTACCCAGGATCCGTCCCCGGATTACTTaGAGGTTCTGGAAGACGCTG +
Preference number: 4 (lower is better)
Translates to: RAASPLRPASLRLSVPRIRPRIT*RFWKTL
Trigger: CAGCGTCTTCCAGAACCTGCAAGTAATCCGGGGACG...GATCCTGGGTACTGAAAGCCTTAGGGAAGCTGGCCTGAGAGGGGAAGCGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp TGGACCCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTTCCCAGGGCACCGTGTaGACGAAGCAGAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: WTLESHWAGPQNPQRLPSSQGTV*TKQRWV
Trigger: CACCCACCTCTGCTTCGTGCACACGGTGCCCTGGGA...ACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CCCAGGTACTCTGGGTTCTCTGCCGTAGGTGTCCCTTTGAAGGTGCTGGGTGGATGGAGCAGAGCTTGGTaGGGGTTCCGAAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PRYSGFSAVGVPLKVLGGWSRAW*GFRKSW
Trigger: CCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCA...TCCACCCAGCACCTTCAAAGGGACACCTACGGCAGAGAACCCAGAGTACCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp CTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGTGGCACGGCAAACAGTaGCTGGCATTCACATACTCC +
Preference number: 4 (lower is better)
Translates to: LPSAVPLPTRLDPFQPSGWHGKQ*LAFTYS
Trigger: GGAGTATGTGAATGCCAGGCACTGTTTGCCGTGCCA...CCCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTAGAGGGCTGGCTCTCTaGTCGGCGGGGCAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: GQSLNGSLLFLDTPLGPLRGLAL*SAGQPL
Trigger: CAAGGGCTGCCCCGCCGAGCAGAGAGCCAGCCCTCT...AAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp GGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCTTCCGGATCTTCTGCTaGCGTCGCTTGATGAGGATC +
Preference number: 4 (lower is better)
Translates to: GSGRRALPPLDASRSQAFFRIFC*RRLMRI
Trigger: GATCCTCATCAAGCGACGGCAGCAGAAGATCCGGAA...GAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTGGATGTCAGGCAGATaGCCAGAAGGCGGGAGACAT +
Preference number: 4 (lower is better)
Translates to: PILPWGESLGPFQSGTSRWMSGR*PEGGRH
Trigger: ATGTCTCCCGCCTTCTGGGCATCTGCCTGACATCCA...CCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp ACACTCGTCCTCTGGCCGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGATCCCCTTGGCAATCTaGATACACCAGTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TLVLWPVGSVEQSLVRVPIPLAI*IHQFSR
Trigger: CCTGCTGAACTGGTGTATGCAGATTGCCAAGGGGAT...CGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR GCA 90 bp CCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGATCCCCTTGGCAATCTaGATACACCAGTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PLEVVGGPSHLLMPAEVRIPLAI*IHQFSR
Trigger: CCTGCTGAACTGGTGTATGCAGATTGCCAAGGGGAT...CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp TGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGGGGGGTCCCTGGCCATaGGGGAGAATTCAGACACCA +
Preference number: 4 (lower is better)
Translates to: WAGPQNPQRLPSAVPLPTGGPWP*GRIQTP
Trigger: TGGTGTCTGAATTCTCCCGCATGGCCAGGGACCCCC...CGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCGGACAGAAGAAGCCCTaGTGGGGTACCAGATACTCC +
Preference number: 4 (lower is better)
Translates to: GKGQAGLWHPLDPRVSLGGQKKP*WGTRYS
Trigger: GGAGTATCTGGTACCCCAGCAGGGCTTCTTCTGTCC...GCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CATCGGAGAACAGGGGTGGCAGGCCCGAGAGCGGTTGGTGTCTATCAGTGTGAGGGACAGAAGAAGCCCTaGTGGGGTACCAGATACTCC +
Preference number: 4 (lower is better)
Translates to: HRRTGVAGPRAVGVYQCEGQKKP*WGTRYS
Trigger: GGAGTATCTGGTACCCCAGCAGGGCTTCTTCTGTCC...CTCACACTGATAGACACCAACCGCTCTCGGGCCTGCCACCCCTGTTCTCCGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR GCA 90 bp CCCACACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATAGCCCCTTCGGAGGGTaGCAGTGGAGACCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: PTLASPYNTHSPPGSLFHSPFGG*QWRPGG
Trigger: GCCCCCAGGTCTCCACTGGCACCCTCCGAAGGGGCT...ATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR GCA 90 bp ATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAATGTGTGGGGAGGCTTTaGAGCCCCTTGGCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: IGQGLRIHKDSPVLFLFQCVGRL*SPLAAP
Trigger: GGGGGCAGCCAAGGGGCTGCAAAGCCTCCCCACACA...TTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGGTACTCTGGGTTCTCTaGCGTAGGTGTCCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: PLEVVGGPSHLLMPAEVRVLWVL*RRCPFE
Trigger: TTCAAAGGGACACCTACGGCAGAGAACCCAGAGTAC...CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTACACATCAGGGCTTCTaGGGACTTGGCCTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: GSPGSGRRALPPLDASRSTHQGF*GLGLLV
Trigger: AACCAGAAGGCCAAGTCCGCAGAAGCCCTGATGTGT...ACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCACACATCAGGGCTTCTaGGGACTTGGCCTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSTHQGF*GLGLLV
Trigger: AACCAGAAGGCCAAGTCCGCAGAAGCCCTGATGTGT...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGACAAAGACTCCCCAGTaGTGTTCCTCTTCCAACGAG +
Preference number: 4 (lower is better)
Translates to: PLEVVGGPSHLLMPAEVRTKTPQ*CSSSNE
Trigger: CTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGT...CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp ATGCCAGGCTCCCAAAGATCTTCTTGCAGCCAGCAAACTCCTGGATATTGGCACAGGGCCTGGCTGGGTTaGCCACGGGCCTCACCTGCA +
Preference number: 4 (lower is better)
Translates to: MPGSQRSSCSQQTPGYWHRAWLG*PRASPA
Trigger: TGCAGGTGAGGCCCGTGGGCAACCCAGCCAGGCCCT...GTGCCAATATCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAGCCTGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp ACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTCCAGGCCGCCAGCTCCATaGTGCTCACTGCGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: TVSEWVAFVLRHSLRAASRPPAP*CSLRLR
Trigger: CCGGAGCCGCAGTGAGCACCATGGAGCTGGCGGCCT...GGAAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269571.10
ENST00000578373.5
CDS-3UTR CCA 90 bp TCACACTGGCACGTCCAGACCCAGGTACTCTGGGTTCTCTGCCGTAGGTGTCCCTTGTCCTCAAAGAGCTaGGTGCCTCGCACAATCCGC +
Preference number: 4 (lower is better)
Translates to: SHWHVQTQVLWVLCRRCPLSSKS*VPRTIR
Trigger: GCGGATTGTGCGAGGCACCCAGCTCTTTGAGGACAA...GGGACACCTACGGCAGAGAACCCAGAGTACCTGGGTCTGGACGTGCCAGTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp GGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCTTGTCCTCAAAGAGCTaGGTGCCTCGCACAATCCGC +
Preference number: 4 (lower is better)
Translates to: GKGQAGLWHPLDPRVSLGLSSKS*VPRTIR
Trigger: GCGGATTGTGCGAGGCACCCAGCTCTTTGAGGACAA...GCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCCAGGTACTCTGGGTTCTCTGCCGTAGGTGTCCCTTTGAAGGTGCTGGGTGGAAGCTGGGGGTTCCGCTaGATCAAGACCCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: PRYSGFSAVGVPLKVLGGSWGFR*IKTPPF
Trigger: GAAAGGAGGGGTCTTGATCCAGCGGAACCCCCAGCT...TCCACCCAGCACCTTCAAAGGGACACCTACGGCAGAGAACCCAGAGTACCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp TCCTCTGGCCGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCCCTCGGGATTGGGCATaGACTCAAACGTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SSGRLAVWSRAWCGFRKSPRDWA*TQTCLC
Trigger: ACACAGACACGTTTGAGTCCATGCCCAATCCCGAGG...GCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp CAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCAAGGCAGTCACACAGCTaGCGCCGAATGTATACCGGC +
Preference number: 4 (lower is better)
Translates to: QRLPSAVPLPTRLDPFQPRQSHS*RRMYTG
Trigger: GCCGGTATACATTCGGCGCCAGCTGTGTGACTGCCT...TGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCATCTGCTGTCACCTCTTaGTTGTGCAGGGGGCAGACG +
Preference number: 4 (lower is better)
Translates to: ERAKLGCGIHWTLESHWASAVTS*LCRGQT
Trigger: CGTCTGCCCCCTGCACAACCAAGAGGTGACAGCAGA...TGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCCAGCCAGCAAACTCCTaGATATTGGCACTGGTAACT +
Preference number: 4 (lower is better)
Translates to: GERVLGLSRVAPAGRAAGQPANS*ILALVT
Trigger: AGTTACCAGTGCCAATATCCAGGAGTTTGCTGGCTG...GCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp CCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTGGAGCTGCTCTGGCTaGAGCGGGGCAGTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: PRVSLGRASESTKTPQCCWSCSG*SGAVLE
Trigger: CTCCAACACTGCCCCGCTCCAGCCAGAGCAGCTCCA...ACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCATTACTTGCAGGTTCTaGAAGACGCTGAGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: PGSGRRALPPLDASRSQAITCRF*KTLRSG
Trigger: GCCTGACCTCAGCGTCTTCCAGAACCTGCAAGTAAT...GGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GCTTGGTGCGGGTTCCGAAAGAGCTGGTCCCAGGGCACCGTGTGCACGAAGCAGATTACTTGCAGGTTCTaGAAGACGCTGAGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: AWCGFRKSWSQGTVCTKQITCRF*KTLRSG
Trigger: GCCTGACCTCAGCGTCTTCCAGAACCTGCAAGTAAT...CTGCTTCGTGCACACGGTGCCCTGGGACCAGCTCTTTCGGAACCCGCACCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CCA 90 bp GGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCAGGTGGGTGTTATGGTaGATGAGGGCCAGTCCACTG +
Preference number: 4 (lower is better)
Translates to: GKGQAGLWHPLDPRVSLGRWVLW*MRASPL
Trigger: CAGTGGACTGGCCCTCATCCACCATAACACCCACCT...GCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGAGGTGGGTGTTATGGTaGATGAGGGCCAGTCCACTG +
Preference number: 4 (lower is better)
Translates to: PILPWGESLGPFQSGTSRRWVLW*MRASPL
Trigger: CAGTGGACTGGCCCTCATCCACCATAACACCCACCT...CCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp AGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTGGGTTCCGAAAGAGCTaGTCCCAGGGCACCGTGTGC +
Preference number: 4 (lower is better)
Translates to: RIHKDSPVLFLFQRGWTPGFRKS*SQGTVC
Trigger: GCACACGGTGCCCTGGGACCAGCTCTTTCGGAACCC...AGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTGGGTTCCGAAAGAGCTaGTCCCAGGGCACCGTGTGC +
Preference number: 4 (lower is better)
Translates to: PRVSLGRASESTKTPQCCGFRKS*SQGTVC
Trigger: GCACACGGTGCCCTGGGACCAGCTCTTTCGGAACCC...ACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAGGGTTCCGAAAGAGCTaGTCCCAGGGCACCGTGTGC +
Preference number: 4 (lower is better)
Translates to: HWAGPQNPQRLPSAVPLPGFRKS*SQGTVC
Trigger: GCACACGGTGCCCTGGGACCAGCTCTTTCGGAACCC...TGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGCACACACTCGTCCTCTaGCCGGTTGGCAGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: WAGPQNPQRLPSAVPLPTHTLVL*PVGSVE
Trigger: CTCCACACTGCCAACCGGCCAGAGGACGAGTGTGTG...CGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATGGCCCCGAAGGAACTaGCTGCAGTTGACACACTGG +
Preference number: 4 (lower is better)
Translates to: QRLPSAVPLPTRLDPFQPWPRRN*LQLTHW
Trigger: CCAGTGTGTCAACTGCAGCCAGTTCCTTCGGGGCCA...TGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCATGGCCCCGAAGGAACTaGCTGCAGTTGACACACTGG +
Preference number: 4 (lower is better)
Translates to: ERAKLGCGIHWTLESHWAWPRRN*LQLTHW
Trigger: CCAGTGTGTCAACTGCAGCCAGTTCCTTCGGGGCCA...TGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp AGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCTCCACGCACTCCTaGCCCCGAAGGAACTGGCTG +
Preference number: 4 (lower is better)
Translates to: RIHKDSPVLFLFQRGWTPSSTHS*PRRNWL
Trigger: CAGCCAGTTCCTTCGGGGCCAGGAGTGCGTGGAGGA...AGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACTCCTCCACGCACTCCTaGCCCCGAAGGAACTGGCTG +
Preference number: 4 (lower is better)
Translates to: LGRASESTKTPQCCSSSNSSTHS*PRRNWL
Trigger: CAGCCAGTTCCTTCGGGGCCAGGAGTGCGTGGAGGA...GTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GTACTCTGGGTTCTCTGCCGTAGGTGTCCCTTTGAAGGTGCTGGGTGGAGCCCCCATTCACATACTCCCTaGGGAGCCCCTGCAGTACTC +
Preference number: 4 (lower is better)
Translates to: VLWVLCRRCPFEGAGWSPHSHTP*GAPAVL
Trigger: GAGTACTGCAGGGGCTCCCCAGGGAGTATGTGAATG...GGGGCTCCACCCAGCACCTTCAAAGGGACACCTACGGCAGAGAACCCAGAGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp CAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCAGCACAGGCCACACACTaGTCAGCCTCCGGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: QRLPSAVPLPTRLDPFQPAQATH*SASGPK
Trigger: TTTTGGACCGGAGGCTGACCAGTGTGTGGCCTGTGC...TGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCACTGGAAACTTCCAGATaGGCATGTAGGAGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: PGERVLGLSRVAPAGRAALETSR*ACRRGQ
Trigger: CTGACCTCTCCTACATGCCCATCTGGAAGTTTCCAG...TGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp TCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCTGGACGTCAGAGGGCTaGCTCTCTGCTCGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: SGTVSEWVAFVLRHSLRAWTSEG*LSARRG
Trigger: GCCCCGCCGAGCAGAGAGCCAGCCCTCTGACGTCCA...GGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp CCCAGGTACTCTGGGTTCTCTGCCGTAGGTGTCCCTTTGAAGGTGCTGGGTGGAAAGGCGGGAGACATATaGGGAGCCCACACCAGCCAT +
Preference number: 4 (lower is better)
Translates to: PRYSGFSAVGVPLKVLGGKAGDI*GAHTSH
Trigger: ATGGCTGGTGTGGGCTCCCCATATGTCTCCCGCCTT...TCCACCCAGCACCTTCAAAGGGACACCTACGGCAGAGAACCCAGAGTACCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp GGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCAGGTAGCTCATCCCCTTaGCAATCTGCATACACCAGT +
Preference number: 4 (lower is better)
Translates to: GRESWAFPEWHQQVGQQAGSSSP*QSAYTS
Trigger: ACTGGTGTATGCAGATTGCCAAGGGGATGAGCTACC...TGCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp TGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGTTGCCCCCATCTGCATaGTACTCTGTCTCGTCAATG +
Preference number: 4 (lower is better)
Translates to: WGESLGPFQSGTSRSGSRLPPSA*YSVSSM
Trigger: CATTGACGAGACAGAGTACCATGCAGATGGGGGCAA...CCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp TCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCCTCCACACATCACTCTaGTGGGTGAACCGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: SLGRASESTKTPQCCSSSLHTSL*WVNRRR
Trigger: CCGCCGGCGGTTCACCCACCAGAGTGATGTGTGGAG...GGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCTCCCATCGTAAGGTTTaGCCCCAAAAGTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: GERVLGLSRVAPAGRAAGSHRKV*PQKSSA
Trigger: AGCTGATGACTTTTGGGGCCAAACCTTACGATGGGA...GCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp ACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGAGGGATCTCCCGGGCTaGGATCCCATCGTAAGGTTT +
Preference number: 4 (lower is better)
Translates to: TPQCCSSSNEAGPLPAIWRDLPG*DPIVRF
Trigger: AAACCTTACGATGGGATCCCAGCCCGGGAGATCCCT...CCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCCAACTCCCGGAATCTTaGCCGACATTCAGAGTCAAT +
Preference number: 4 (lower is better)
Translates to: GERVLGLSRVAPAGRAAGQLPES*PTFRVN
Trigger: ATTGACTCTGAATGTCGGCCAAGATTCCGGGAGTTG...GCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp CTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCATGACCACAAAGCGCTaGGGGTCCCTGGCCATGCGG +
Preference number: 4 (lower is better)
Translates to: LRIHKDSPVLFLFQRGWTMTTKR*GSLAMR
Trigger: CCGCATGGCCAGGGACCCCCAGCGCTTTGTGGTCAT...GGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TGGACCCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTATGACCACAAAGCGCTaGGGGTCCCTGGCCATGCGG +
Preference number: 4 (lower is better)
Translates to: WTLESHWAGPQNPQRLPSMTTKR*GSLAMR
Trigger: CCGCATGGCCAGGGACCCCCAGCGCTTTGTGGTCAT...ACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCATGACCACAAAGCGCTaGGGGTCCCTGGCCATGCGG +
Preference number: 4 (lower is better)
Translates to: SLGRASESTKTPQCCSSSMTTKR*GSLAMR
Trigger: CCGCATGGCCAGGGACCCCCAGCGCTTTGTGGTCAT...GGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGGTCCAAGGGACTGGCTaGGCCCAAGTCCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: PQRLPSAVPLPTRLDPFQVQGTG*AQVLIL
Trigger: CAGAATGAGGACTTGGGCCCAGCCAGTCCCTTGGAC...CTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCATGCTGTCCAAGGGACTaGCTGGGCCCAAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: ERAKLGCGIHWTLESHWACCPRD*LGPSPH
Trigger: ATGAGGACTTGGGCCCAGCCAGTCCCTTGGACAGCA...TGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TGGACCCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGGCTTTGCAGCCCCTTaGCTGCCCCCATTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: WTLESHWAGPQNPQRLPSGFAAP*LPPFPG
Trigger: ACCTGGGAATGGGGGCAGCCAAGGGGCTGCAAAGCC...ACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp AGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCGGCTGGGGTCATGTGTaGGGAGGCTTTGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SLIGQGLRIHKDSPVLFLGWGHV*GGFAAP
Trigger: AGGGGCTGCAAAGCCTCCCCACACATGACCCCAGCC...GAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TGGACCCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGGCTGGGGTCATGTGTaGGGAGGCTTTGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: WTLESHWAGPQNPQRLPSGWGHV*GGFAAP
Trigger: AGGGGCTGCAAAGCCTCCCCACACATGACCCCAGCC...ACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GTTCTTAGACACTCCCTTAGGGCCGCTTCCCCTCTCAGGCCAGCTTCCCTAAGGTTCACATATTCAGGCTaGGGGCTGCAGGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: VLRHSLRAASPLRPASLRFTYSG*GLQVRG
Trigger: CCCCCTGACCTGCAGCCCCCAGCCTGAATATGTGAA...CCTTAGGGAAGCTGGCCTGAGAGGGGAAGCGGCCCTAAGGGAGTGTCTAAGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCGGCCGAACATCTGGCTaGTTCACATATTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSGRTSG*FTYSGW
Trigger: CCAGCCTGAATATGTGAACCAGCCAGATGTTCGGCC...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCGGCCGAACATCTGGCTaGTTCACATATTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GSGRRALPPLDASRSQAFGRTSG*FTYSGW
Trigger: CCAGCCTGAATATGTGAACCAGCCAGATGTTCGGCC...GAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TGGACCCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTTGGGCCTTTCCAGAGTaGCACCAGCAGGTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: WTLESHWAGPQNPQRLPSWAFPE*HQQVGQ
Trigger: CTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCA...ACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp AGGGCCGCTTCCCCTCTCAGGCCAGCTTCCCTAAGGCTTTCAGTACCCAGGATCCAGACCCAGGTACTCTaGGTTCTCTGCCGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: RAASPLRPASLRLSVPRIQTQVL*VLCRRC
Trigger: ACACCTACGGCAGAGAACCCAGAGTACCTGGGTCTG...GATCCTGGGTACTGAAAGCCTTAGGGAAGCTGGCCTGAGAGGGGAAGCGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp GACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGCCCCTTCCAGCCATCTaGGAACTCAAGCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: DSPVLFLFQRGWTPSSHLPLPAI*ELKQEG
Trigger: TCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGG...CAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCTCAGCTCCGTCTCTTTCAGGATCCGCATCTGCGCCTGGTTGGGCATCGCTCCACCCTAGAGTCTCATTaGGCAGGGCCTCAGAATCCA +
Preference number: 4 (lower is better)
Translates to: PQLRLFQDPHLRLVGHRSTLESH*AGPQNP
Trigger: TGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGT...GGAGCGATGCCCAACCAGGCGCAGATGCGGATCCTGAAAGAGACGGAGCTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp GACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGCTGTGGCATCCACTaGACCCTAGAGTCTCATTGG +
Preference number: 4 (lower is better)
Translates to: DSPVLFLFQRGWTPSSHLGCGIH*TLESHW
Trigger: CCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCC...CAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCTCAGTACCCAGGATCTaGAAGGAAAGGGCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSSVPRI*KERAKL
Trigger: CAGCTTGGCCCTTTCCTTCCAGATCCTGGGTACTGA...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTTGCAAATGGACAAAGTaGGTGTGGAGAAGGACCCCC +
Preference number: 4 (lower is better)
Translates to: GSPGSGRRALPPLDASRSCKWTK*VWRRTP
Trigger: GGGGGTCCTTCTCCACACCCACTTTGTCCATTTGCA...ACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR CCA 90 bp GGACCCCTTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACACTGCCTGCGCAGGCATaGCTGCCAGGGTCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: GPLPAIWELKQEGRFLRTLPAQA*LPGSES
Trigger: AGACTCAGACCCTGGCAGCCATGCCTGCGCAGGCAG...TGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584601.5
CDS-3UTR TCA 90 bp TGGAAGGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGTGGGCAGGTAGGTaGGTTCCAGGTTTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: WKERAKLGCGIHWTLESHWWAGR*VPGFPA
Trigger: TGCAGGGAAACCTGGAACTCACCTACCTGCCCACCA...ATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp CTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGTGGTGTCTATCAGTGTaGGAGCCAGCTGGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: LPSAVPLPTRLDPFQPSGWCLSV*EPAGCS
Trigger: AGAACAACCAGCTGGCTCTCACACTGATAGACACCA...CCCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp CATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAGGGTGTTATGGTGGATaGGGGCCAGTCCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: HWAGPQNPQRLPSAVPLPGCYGG*GPVHCP
Trigger: TGGGCAGTGGACTGGCCCTCATCCACCATAACACCC...TGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp GGACCCCTTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAGGGTGTTATGGTGGATaGGGGCCAGTCCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: GPLPAIWELKQEGRFLRTGCYGG*GPVHCP
Trigger: TGGGCAGTGGACTGGCCCTCATCCACCATAACACCC...TGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp TTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAGGTTCCTGAGCCATTCTGGGGCTaGCACTCAGGGTGGCACGGC +
Preference number: 4 (lower is better)
Translates to: FQPSGNSSRKEGSLGQVPEPFWG*HSGWHG
Trigger: GCCGTGCCACCCTGAGTGTCAGCCCCAGAATGGCTC...AGGAACCTGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp AGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCCAACCACCGCAGAGATaGTGGACGTCAGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SLIGQGLRIHKDSPVLFLQPPQR*WTSEGW
Trigger: CCAGCCCTCTGACGTCCATCATCTCTGCGGTGGTTG...GAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp TTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACCATGGTTGGGACTCTTaGCCAGCACGTTCCGAGCGG +
Preference number: 4 (lower is better)
Translates to: LGRASESTKTPQCCSSSNHGWDS*PARSER
Trigger: CCGCTCGGAACGTGCTGGTCAAGAGTCCCAACCATG...GTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp GTTCTTAGACACTCCCTTAGGGCCGCTTCCCCTCTCAGGCCAGCTTCCCTAAGGAGTCCTCATTCTGGATaGCCACAAAGCGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: VLRHSLRAASPLRPASLRSPHSG*PQSAGG
Trigger: ACCCCCAGCGCTTTGTGGTCATCCAGAATGAGGACT...CCTTAGGGAAGCTGGCCTGAGAGGGGAAGCGGCCCTAAGGGAGTGTCTAAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR TCA 90 bp GTCACCATCAAATACATCGGAGCCAGCCCCTTCGGAGGGTGCCAGTGGAGACCTAGTCCTCATTCTGGATaGCCACAAAGCGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: VTIKYIGASPFGGCQWRPSPHSG*PQSAGG
Trigger: ACCCCCAGCGCTTTGTGGTCATCCAGAATGAGGACT...AGGTCTCCACTGGCACCCTCCGAAGGGGCTGGCTCCGATGTATTTGATGGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR TCA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCAGGCAAAAACGTCTTTaGCGACCCCATTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSRQKRL*RPHSSL
Trigger: CAGGGAAGAATGGGGTCGTCAAAGACGTTTTTGCCT...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp AGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTGCCTTCCCTGCTCCCTaGGGACACATCAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: RIHKDSPVLFLFQRGWTPAFPAP*GHIRAS
Trigger: AGAAGCCCTGATGTGTCCTCAGGGAGCAGGGAAGGC...AGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp CTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCGCCTTCCCTGCTCCCTaGGGACACATCAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LRIHKDSPVLFLFQRGWTAFPAP*GHIRAS
Trigger: AGAAGCCCTGATGTGTCCTCAGGGAGCAGGGAAGGC...GGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp CCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGACAAAGCCTGGATACTaGCACCATTGCTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: PLEVVGGPSHLLMPAEVRTKPGY*HHCCSF
Trigger: GAAGGAACAGCAATGGTGTCAGTATCCAGGCTTTGT...CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp AAACTCCTGGATATTGGCACTGGTAACTGCCCTCACCTCTCGCAAGTGCTCCATCTCCATGGTGCTCACTaGGGCTCCGGCCCCATGGCT +
Preference number: 4 (lower is better)
Translates to: KLLDIGTGNCPHLSQVLHLHGAH*GSGPMA
Trigger: AGCCATGGGGCCGGAGCCGCAGTGAGCACCATGGAG...ATGGAGCACTTGCGAGAGGTGAGGGCAGTTACCAGTGCCAATATCCAGGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR GCA 90 bp CAGCGAGTAGGCGCCATTGTGCAGAATTCGTCCCCGGATTACTTGCAGGTTCTGAGTTCCAGGTTTCCCTaGACCACCTGGCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QRVGAIVQNSSPDYLQVLSSRFP*TTWQPW
Trigger: CCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGAACT...CAGAACCTGCAAGTAATCCGGGGACGAATTCTGCACAATGGCGCCTACTCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR GCA 90 bp TGGACCCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTCCTCAAAGAGCTGGGTaGCTCGCACAATCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: WTLESHWAGPQNPQRLPSPQRAG*LAQSAA
Trigger: GGCTGCGGATTGTGCGAGGCACCCAGCTCTTTGAGG...ACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp AGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTCCTCAAAGAGCTGGGTaGCTCGCACAATCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: RIHKDSPVLFLFQRGWTPPQRAG*LAQSAA
Trigger: GGCTGCGGATTGTGCGAGGCACCCAGCTCTTTGAGG...AGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GCTCCCAAAGATCTTCTTGCAGCCAGCAAACTCCTGGATATTGGCACTGGTAACGCCAGGCAGTCAGAGTaGTTGGGGCCCGTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: APKDLLAASKLLDIGTGNARQSE*LGPVQP
Trigger: CGGCTGCACGGGCCCCAAGCACTCTGACTGCCTGGC...GTTACCAGTGCCAATATCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR GCA 90 bp GCAGCCAGCAAACTCCTGGATATTGGCACTGGTAACTGCCCTCACCTCTCGCAAGGGCACAGGGCTTGCTaGACTTCTCACACCGCTGTG +
Preference number: 4 (lower is better)
Translates to: AASKLLDIGTGNCPHLSQGHRAC*TSHTAV
Trigger: CACAGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCC...TTGCGAGAGGTGAGGGCAGTTACCAGTGCCAATATCCAGGAGTTTGCTGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR GCA 90 bp CCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTGGGCACAGGGCTTGCTaGACTTCTCACACCGCTGTG +
Preference number: 4 (lower is better)
Translates to: PRVSLGRASESTKTPQCCGHRAC*TSHTAV
Trigger: CACAGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCC...ACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp AGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTCTCGGGCACAGGGCTTaGTGCACTTCTCACACCGCT +
Preference number: 4 (lower is better)
Translates to: RIHKDSPVLFLFQRGWTPLGHRA*CTSHTA
Trigger: AGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAG...AGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCACTCGGGCACAGGGCTTaGTGCACTTCTCACACCGCT +
Preference number: 4 (lower is better)
Translates to: HWAGPQNPQRLPSAVPLPLGHRA*CTSHTA
Trigger: AGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAG...TGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CATGCCCAGACCATAGCACACTCGGGCACAGGGCTTGCTGCACTTCTCACACCGATTGGCACTGGTAACTaGCCTCACCTCTCGCAAGTG +
Preference number: 4 (lower is better)
Translates to: HAQTIAHSGTGLAALLTPIGTGN*PHLSQV
Trigger: CACTTGCGAGAGGTGAGGGCAGTTACCAGTGCCAAT...CGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGTGTGCTATGGTCTGGGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR GCA 90 bp GCTTGGTGCGGGTTCCGAAAGAGCTGGTCCCAGGGCACCGTGTGCACGAAGCAGTCCCAAAGATCTTCTTaGAGCCAGCAAACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: AWCGFRKSWSQGTVCTKQSQRSS*SQQTPG
Trigger: TCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGA...CTGCTTCGTGCACACGGTGCCCTGGGACCAGCTCTTTCGGAACCCGCACCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR GCA 90 bp GGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCATCCCAAAGATCTTCTTaGAGCCAGCAAACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GRESWAFPEWHQQVGQQASQRSS*SQQTPG
Trigger: TCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGA...TGCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp GACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGCTCTCCGGCAGAAATaGCAGGCTCCCAAAGATCTT +
Preference number: 4 (lower is better)
Translates to: DSPVLFLFQRGWTPSSHLALRQK*QAPKDL
Trigger: AAGATCTTTGGGAGCCTGGCATTTCTGCCGGAGAGC...CAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp AGGGCCGCTTCCCCTCTCAGGCCAGCTTCCCTAAGGCTTTCAGTACCCAGGATCGCTCTCCGGCAGAAATaGCAGGCTCCCAAAGATCTT +
Preference number: 4 (lower is better)
Translates to: RAASPLRPASLRLSVPRIALRQK*QAPKDL
Trigger: AAGATCTTTGGGAGCCTGGCATTTCTGCCGGAGAGC...GATCCTGGGTACTGAAAGCCTTAGGGAAGCTGGCCTGAGAGGGGAAGCGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp AACTGCCCTCACCTCTCGCAAGTGCTCCATGCCCAGACCATAGCACACTCGGGCGCTCTCCGGCAGAAATaGCAGGCTCCCAAAGATCTT +
Preference number: 4 (lower is better)
Translates to: NCPHLSQVLHAQTIAHSGALRQK*QAPKDL
Trigger: AAGATCTTTGGGAGCCTGGCATTTCTGCCGGAGAGC...GCCCGAGTGTGCTATGGTCTGGGCATGGAGCACTTGCGAGAGGTGAGGGCAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR GCA 90 bp ATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAATCCCAGGGCACCGTGTaGACGAAGCAGAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: IGQGLRIHKDSPVLFLFQSQGTV*TKQRWV
Trigger: CACCCACCTCTGCTTCGTGCACACGGTGCCCTGGGA...TTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CCATTGTGCAGAATTCGTCCCCGGATTACTTGCAGGTTCTGGAAGACGCTGAGGTCCCAGGGCACCGTGTaGACGAAGCAGAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PLCRIRPRITCRFWKTLRSQGTV*TKQRWV
Trigger: CACCCACCTCTGCTTCGTGCACACGGTGCCCTGGGA...CCTCAGCGTCTTCCAGAACCTGCAAGTAATCCGGGGACGAATTCTGCACAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR GCA 90 bp ACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGTACTTCCGGATCTTCTaGTGCCGTCGCTTGATGAGG +
Preference number: 4 (lower is better)
Translates to: TPQCCSSSNEAGPLPAIWYFRIF*CRRLMR
Trigger: CCTCATCAAGCGACGGCAGCAGAAGATCCGGAAGTA...CCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp TTTGACGACCCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCTTCAGGATCCGCATCTaGGCCTGGTTGGGCATCGCT +
Preference number: 4 (lower is better)
Translates to: FDDPILPWGESLGPFQSGFRIRI*AWLGIA
Trigger: AGCGATGCCCAACCAGGCGCAGATGCGGATCCTGAA...GCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGGGTCGTCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp CCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGTGGATGTCAGGCAGATaGCCAGAAGGCGGGAGACAT +
Preference number: 4 (lower is better)
Translates to: PQRLPSAVPLPTRLDPFQWMSGR*PEGGRH
Trigger: ATGTCTCCCGCCTTCTGGGCATCTGCCTGACATCCA...CTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp TGGAAGGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATAGCTGTGTCACCAGCTaGACCGTGGATGTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: WKERAKLGCGIHWTLESHSCVTS*TVDVRQ
Trigger: CTGCCTGACATCCACGGTGCAGCTGGTGACACAGCT...ATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp ACCCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCACACCTTGCCCCCATCTaGATGGTACTCTGTCTCGTC +
Preference number: 4 (lower is better)
Translates to: TPFFPGERVLGLSRVAPAHLAPI*MVLCLV
Trigger: GACGAGACAGAGTACCATGCAGATGGGGGCAAGGTG...TGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp GCAGCCAGCAAACTCCTGGATATTGGCACTGGTAACTGCCCTCACCTCTCGCAAGGGGGTCCCTGGCCATaGGGGAGAATTCAGACACCA +
Preference number: 4 (lower is better)
Translates to: AASKLLDIGTGNCPHLSQGGPWP*GRIQTP
Trigger: TGGTGTCTGAATTCTCCCGCATGGCCAGGGACCCCC...TTGCGAGAGGTGAGGGCAGTTACCAGTGCCAATATCCAGGAGTTTGCTGGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR GCA 90 bp CCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTGGGGGTCCCTGGCCATaGGGGAGAATTCAGACACCA +
Preference number: 4 (lower is better)
Translates to: PRVSLGRASESTKTPQCCGGPWP*GRIQTP
Trigger: TGGTGTCTGAATTCTCCCGCATGGCCAGGGACCCCC...ACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GTTCTTAGACACTCCCTTAGGGCCGCTTCCCCTCTCAGGCCAGCTTCCCTAAGGGGACAGAAGAAGCCCTaGTGGGGTACCAGATACTCC +
Preference number: 4 (lower is better)
Translates to: VLRHSLRAASPLRPASLRGQKKP*WGTRYS
Trigger: GGAGTATCTGGTACCCCAGCAGGGCTTCTTCTGTCC...CCTTAGGGAAGCTGGCCTGAGAGGGGAAGCGGCCCTAAGGGAGTGTCTAAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp ACCCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGACAGAAGAAGCCCTaGTGGGGTACCAGATACTCC +
Preference number: 4 (lower is better)
Translates to: TPFFPGERVLGLSRVAPAGQKKP*WGTRYS
Trigger: GGAGTATCTGGTACCCCAGCAGGGCTTCTTCTGTCC...TGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp CCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTGTAGATGAGCTGCGGTaGCTGTGGTGGACCATGCCC +
Preference number: 4 (lower is better)
Translates to: PRVSLGRASESTKTPQCCVDELR*LWWTMP
Trigger: GGGCATGGTCCACCACAGGCACCGCAGCTCATCTAC...ACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp TCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCTGTGTGGGGAGGCTTTaGAGCCCCTTGGCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: SGTVSEWVAFVLRHSLRACVGRL*SPLAAP
Trigger: GGGGGCAGCCAAGGGGCTGCAAAGCCTCCCCACACA...GGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCACAAAGACTCCCCAGTaGTGTTCCTCTTCCAACGAG +
Preference number: 4 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSTKTPQ*CSSSNE
Trigger: CTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGT...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCAGGGTCTGAGTCTCTGTaGTGCACTGCGTTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: QRLPSAVPLPTRLDPFQPGSESL*CTAFVL
Trigger: CAGGACAAACGCAGTGCAGCACAGAGACTCAGACCC...TGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584601.5
CDS-3UTR CCA 90 bp AAGATCTTCTTGCAGCCAGCAAACTCCTGGATATTGGCACTGGTAACTGCCCTCAGGCCGCCAGCTCCATaGTGCTCACTGCGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: KIFLQPANSWILALVTALRPPAP*CSLRLR
Trigger: CCGGAGCCGCAGTGAGCACCATGGAGCTGGCGGCCT...GAGGGCAGTTACCAGTGCCAATATCCAGGAGTTTGCTGGCTGCAAGAAGATCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CCA 90 bp AGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTGCAGGAAGGACAGGCTaGCATTGGTGGGCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: RIHKDSPVLFLFQRGWTPAGRTG*HWWAGR
Trigger: CCTACCTGCCCACCAATGCCAGCCTGTCCTTCCTGC...AGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAGCAGGAAGGACAGGCTaGCATTGGTGGGCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: HWAGPQNPQRLPSAVPLPAGRTG*HWWAGR
Trigger: CCTACCTGCCCACCAATGCCAGCCTGTCCTTCCTGC...TGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTAGTGTGAGAGCCAGCTaGTTGTTCTTGTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: GRRALPPLDASRSQAFPASVRAS*LFLWKM
Trigger: CATCTTCCACAAGAACAACCAGCTGGCTCTCACACT...AGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGCCTCGGGATTGGGCATaGACTCAAACGTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: DSPVLFLFQRGWTPSSHLPRDWA*TQTCLC
Trigger: ACACAGACACGTTTGAGTCCATGCCCAATCCCGAGG...CAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TGGAAGGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATACCGGCCCTCGGGATTaGGCATGGACTCAAACGTGT +
Preference number: 4 (lower is better)
Translates to: WKERAKLGCGIHWTLESHTGPRD*AWTQTC
Trigger: ACACGTTTGAGTCCATGCCCAATCCCGAGGGCCGGT...ATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TGGAAGGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTCTGCTGTCACCTCTTaGTTGTGCAGGGGGCAGACG +
Preference number: 4 (lower is better)
Translates to: WKERAKLGCGIHWTLESHSAVTS*LCRGQT
Trigger: CGTCTGCCCCCTGCACAACCAAGAGGTGACAGCAGA...ATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCCTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp ATGGCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCCAGCCAGCAAACTCCTaGATATTGGCACTGGTAACT +
Preference number: 4 (lower is better)
Translates to: MAGSPGSGRRALPPLDASQPANS*ILALVT
Trigger: AGTTACCAGTGCCAATATCCAGGAGTTTGCTGGCTG...GCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCCAGCCAGCAAACTCCTaGATATTGGCACTGGTAACT +
Preference number: 4 (lower is better)
Translates to: PGSGRRALPPLDASRSQAQPANS*ILALVT
Trigger: AGTTACCAGTGCCAATATCCAGGAGTTTGCTGGCTG...GGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TGGAAGGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATGGCAGTGTTGGAGGCTaGGTCCCCATCAAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: WKERAKLGCGIHWTLESHGSVGG*VPIKAL
Trigger: GAGAGCTTTGATGGGGACCCAGCCTCCAACACTGCC...ATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCCTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GCAGGGTCAGCGAGTAGGCGCCATTGTGCAGAATTCGTCCCCGGATTACTTGCAGGCAGTGTTGGAGGCTaGGTCCCCATCAAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: AGSASRRHCAEFVPGLLAGSVGG*VPIKAL
Trigger: GAGAGCTTTGATGGGGACCCAGCCTCCAACACTGCC...TGCAAGTAATCCGGGGACGAATTCTGCACAATGGCGCCTACTCGCTGACCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CCA 90 bp GTTCTTAGACACTCCCTTAGGGCCGCTTCCCCTCTCAGGCCAGCTTCCCTAAGGAGGTGGGTGTTATGGTaGATGAGGGCCAGTCCACTG +
Preference number: 4 (lower is better)
Translates to: VLRHSLRAASPLRPASLRRWVLW*MRASPL
Trigger: CAGTGGACTGGCCCTCATCCACCATAACACCCACCT...CCTTAGGGAAGCTGGCCTGAGAGGGGAAGCGGCCCTAAGGGAGTGTCTAAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp GACCATAGCACACTCGGGCACAGGGCTTGCTGCACTTCTCACACCGCTGTGTTCAGGTGGGTGTTATGGTaGATGAGGGCCAGTCCACTG +
Preference number: 4 (lower is better)
Translates to: DHSTLGHRACCTSHTAVFRWVLW*MRASPL
Trigger: CAGTGGACTGGCCCTCATCCACCATAACACCCACCT...GAACACAGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGTGTGCTATGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CCA 90 bp AGGGCCGCTTCCCCTCTCAGGCCAGCTTCCCTAAGGCTTTCAGTACCCAGGATCTGCACGAAGCAGAGGTaGGTGTTATGGTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: RAASPLRPASLRLSVPRICTKQR*VLWWMR
Trigger: CCTCATCCACCATAACACCCACCTCTGCTTCGTGCA...GATCCTGGGTACTGAAAGCCTTAGGGAAGCTGGCCTGAGAGGGGAAGCGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp GGACCCCTTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACACACACACTCGTCCTCTaGCCGGTTGGCAGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: GPLPAIWELKQEGRFLRTHTLVL*PVGSVE
Trigger: CTCCACACTGCCAACCGGCCAGAGGACGAGTGTGTG...TGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTCCCCTCTCATCCTCCACGCACTCCTaGCCCCGAAGGAACTGGCTG +
Preference number: 4 (lower is better)
Translates to: LNGSLLFLDTPLGPLPLSSSTHS*PRRNWL
Trigger: CAGCCAGTTCCTTCGGGGCCAGGAGTGCGTGGAGGA...TGAGAGGGGAAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp CAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCACATTCACATACTCCCTaGGGAGCCCCTGCAGTACTC +
Preference number: 4 (lower is better)
Translates to: QRLPSAVPLPTRLDPFQPHSHTP*GAPAVL
Trigger: GAGTACTGCAGGGGCTCCCCAGGGAGTATGTGAATG...TGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCATTCACATACTCCCTaGGGAGCCCCTGCAGTACTC +
Preference number: 4 (lower is better)
Translates to: PQRLPSAVPLPTRLDPFQHSHTP*GAPAVL
Trigger: GAGTACTGCAGGGGCTCCCCAGGGAGTATGTGAATG...CTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp AGGTCACCATCAAATACATCGGAGCCAGCCCCTTCGGAGGGTGCCAGTGGAGACCATTCACATACTCCCTaGGGAGCCCCTGCAGTACTC +
Preference number: 4 (lower is better)
Translates to: RSPSNTSEPAPSEGASGDHSHTP*GAPAVL
Trigger: GAGTACTGCAGGGGCTCCCCAGGGAGTATGTGAATG...GTCTCCACTGGCACCCTCCGAAGGGGCTGGCTCCGATGTATTTGATGGTGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp GACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGACGGCAAACAGTGCCTaGCATTCACATACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: DSPVLFLFQRGWTPSSHLTANSA*HSHTPW
Trigger: CCAGGGAGTATGTGAATGCCAGGCACTGTTTGCCGT...CAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp ACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGACGGCAAACAGTGCCTaGCATTCACATACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: TPQCCSSSNEAGPLPAIWTANSA*HSHTPW
Trigger: CCAGGGAGTATGTGAATGCCAGGCACTGTTTGCCGT...CCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GATATTGGCACTGGTAACTGCCCTCACCTCTCGCAAGTGCTCCATGCCCAGACCGCACAGGCCACACACTaGTCAGCCTCCGGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: DIGTGNCPHLSQVLHAQTAQATH*SASGPK
Trigger: TTTTGGACCGGAGGCTGACCAGTGTGTGGCCTGTGC...GGTCTGGGCATGGAGCACTTGCGAGAGGTGAGGGCAGTTACCAGTGCCAATATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp GACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGTGCGCCCTCCTCATCTaGAAACTTCCAGATGGGCAT +
Preference number: 4 (lower is better)
Translates to: DSPVLFLFQRGWTPSSHLCALLI*KLPDGH
Trigger: ATGCCCATCTGGAAGTTTCCAGATGAGGAGGGCGCA...CAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGAGGTCCACACAGGAGTaGGTGCAGTTGATGGGGCAA +
Preference number: 4 (lower is better)
Translates to: PQRLPSAVPLPTRLDPFQRSTQE*VQLMGQ
Trigger: TTGCCCCATCAACTGCACCCACTCCTGTGTGGACCT...CTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GTTCTTAGACACTCCCTTAGGGCCGCTTCCCCTCTCAGGCCAGCTTCCCTAAGGAGGTCCACACAGGAGTaGGTGCAGTTGATGGGGCAA +
Preference number: 4 (lower is better)
Translates to: VLRHSLRAASPLRPASLRRSTQE*VQLMGQ
Trigger: TTGCCCCATCAACTGCACCCACTCCTGTGTGGACCT...CCTTAGGGAAGCTGGCCTGAGAGGGGAAGCGGCCCTAAGGGAGTGTCTAAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp AGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTATCCGCATCTGCGCCTaGTTGGGCATCGCTCCGCTA +
Preference number: 4 (lower is better)
Translates to: RIHKDSPVLFLFQRGWTPIRICA*LGIAPL
Trigger: TAGCGGAGCGATGCCCAACCAGGCGCAGATGCGGAT...AGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGACCCCTTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAATCCGCATCTGCGCCTaGTTGGGCATCGCTCCGCTA +
Preference number: 4 (lower is better)
Translates to: GPLPAIWELKQEGRFLRTIRICA*LGIAPL
Trigger: TAGCGGAGCGATGCCCAACCAGGCGCAGATGCGGAT...TGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTGGTAGCTCATCCCCTTaGCAATCTGCATACACCAGT +
Preference number: 4 (lower is better)
Translates to: GSPGSGRRALPPLDASRSGSSSP*QSAYTS
Trigger: ACTGGTGTATGCAGATTGCCAAGGGGATGAGCTACC...ACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCTTGCCCCCATCTGCATaGTACTCTGTCTCGTCAATG +
Preference number: 4 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSLPPSA*YSVSSM
Trigger: CATTGACGAGACAGAGTACCATGCAGATGGGGGCAA...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp ATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACTCCACACATCACTCTaGTGGGTGAACCGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: IGQGLRIHKDSPVLFLFQLHTSL*WVNRRR
Trigger: CCGCCGGCGGTTCACCCACCAGAGTGATGTGTGGAG...TTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTTCCCATCGTAAGGTTTaGCCCCAAAAGTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: GRRALPPLDASRSQAFPASHRKV*PQKSSA
Trigger: AGCTGATGACTTTTGGGGCCAAACCTTACGATGGGA...AGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp ATGGCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCCAACTCCCGGAATCTTaGCCGACATTCAGAGTCAAT +
Preference number: 4 (lower is better)
Translates to: MAGSPGSGRRALPPLDASQLPES*PTFRVN
Trigger: ATTGACTCTGAATGTCGGCCAAGATTCCGGGAGTTG...GCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp ACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTCCTTCGGAGGGTGCCAGTaGAGACCTGGGGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: TVSEWVAFVLRHSLRAASFGGCQ*RPGGLL
Trigger: GAGGAGGCCCCCAGGTCTCCACTGGCACCCTCCGAA...GGAAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp TGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGGACCCCATTCTTCCCTaGGGAGAGAGTCTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: WAGPQNPQRLPSAVPLPTDPILP*GESLGP
Trigger: AGGCCCAAGACTCTCTCCCCAGGGAAGAATGGGGTC...CGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGGGCTGTGGCATCCACTaGACCCTAGAGTCTCATTGG +
Preference number: 4 (lower is better)
Translates to: PQRLPSAVPLPTRLDPFQGCGIH*TLESHW
Trigger: CCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCC...CTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGTCAGTACCCAGGATCTaGAAGGAAAGGGCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: DSPVLFLFQRGWTPSSHLSVPRI*KERAKL
Trigger: CAGCTTGGCCCTTTCCTTCCAGATCCTGGGTACTGA...CAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCATGCCCAGACCATAGCACACTCGGGCACAGGGCTTGCTGCACTTCTCACACCTCAGTACCCAGGATCTaGAAGGAAAGGGCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: PCPDHSTLGHRACCTSHTSVPRI*KERAKL
Trigger: CAGCTTGGCCCTTTCCTTCCAGATCCTGGGTACTGA...GGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGTGTGCTATGGTCTGGGCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCTCCTGGCCATTCTACTaGTGCCCCCGTTTTATCTGT +
Preference number: 4 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSSWPFY*CPRFIC
Trigger: ACAGATAAAACGGGGGCACCAGTAGAATGGCCAGGA...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584601.5
CDS-3UTR CCA 90 bp CCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGCTGGGGCCGAACATCTaGCTGGTTCACATATTCCTG +
Preference number: 4 (lower is better)
Translates to: PILPWGESLGPFQSGTSRLGPNI*LVHIFL
Trigger: CAGGAATATGTGAACCAGCCAGATGTTCGGCCCCAG...CCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584450.5
3UTR CAA 72 bp CGCATCGTGTACTTCCGGATCTTCTGCTGCCGTCGCTaGATGAGGATCCCAAAGACCACCCCCAAGACCACG +
Preference number: 4 (lower is better)
Translates to: RIVYFRIFCCRR*MRIPKTTPKTT
Trigger: CGTGGTCTTGGGGGTGGTCTTTGGGATCCTCATCAAGCGACGGCAGCAGAAGATCCGGAAGTACACGATGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR TCA 90 bp TGGACCCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTCTTGGTTGTGAGCGATaGGCACGTAGCCCTGCACCT +
Preference number: 4 (lower is better)
Translates to: WTLESHWAGPQNPQRLPSLGCER*ARSPAP
Trigger: AGGTGCAGGGCTACGTGCTCATCGCTCACAACCAAG...ACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp CATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCACTTGGTTGTGAGCGATaGGCACGTAGCCCTGCACCT +
Preference number: 4 (lower is better)
Translates to: HWAGPQNPQRLPSAVPLPLGCER*ARSPAP
Trigger: AGGTGCAGGGCTACGTGCTCATCGCTCACAACCAAG...TGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp GGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCCTTTCAAGATCTCTGTaGGGCTTCGAAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GKGQAGLWHPLDPRVSLGLSRSL*GFEAAA
Trigger: AGCTGCAGCTTCGAAGCCTCACAGAGATCTTGAAAG...GCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp CCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTGTCTGTGTTGTAGGTaGCCAGGGCTGGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: PRVSLGRASESTKTPQCCCLCCR*PGLGSA
Trigger: TGCACTGCCCAGCCCTGGTCACCTACAACACAGACA...ACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp TGGACCCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTTGTCTGTGTTGTAGGTaGCCAGGGCTGGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: WTLESHWAGPQNPQRLPSCLCCR*PGLGSA
Trigger: TGCACTGCCCAGCCCTGGTCACCTACAACACAGACA...ACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp CATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCATGTCTGTGTTGTAGGTaGCCAGGGCTGGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: HWAGPQNPQRLPSAVPLPCLCCR*PGLGSA
Trigger: TGCACTGCCCAGCCCTGGTCACCTACAACACAGACA...TGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp GGCTGGAGCGGGGCAGTGTTGGAGGCTGGGTCCCCATCAAAGCTCTCCGGCAGATGTATAGGTAACCTGTaGTCTCTTCCAGAGTCTCAA +
Preference number: 4 (lower is better)
Translates to: GWSGAVLEAGSPSKLSGRCIGNL*SLPESQ
Trigger: TTGAGACTCTGGAAGAGATCACAGGTTACCTATACA...TCTGCCGGAGAGCTTTGATGGGGACCCAGCCTCCAACACTGCCCCGCTCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR TCA 90 bp TTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAGGTTCCTGGTTCTGGAAGACGCTaGGGTCAGGCAGGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: FQPSGNSSRKEGSLGQVPGSGRR*GQAGCP
Trigger: CGGACAGCCTGCCTGACCTCAGCGTCTTCCAGAACC...AGGAACCTGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp TTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAGGTTCCTGGAACTGGCTGCAGTTaGCACACTGGGTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: FQPSGNSSRKEGSLGQVPGTGCS*HTGWAL
Trigger: CAGGGCCCACCCAGTGTGTCAACTGCAGCCAGTTCC...AGGAACCTGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp GAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCATCCAAAACAGGTCACTaGGCCATTCTGGGGCTGACA +
Preference number: 4 (lower is better)
Translates to: ERAKLGCGIHWTLESHWASKTGH*AILGLT
Trigger: TGTCAGCCCCAGAATGGCTCAGTGACCTGTTTTGGA...TGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp ACCCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCATCCAAAACAGGTCACTaGGCCATTCTGGGGCTGACA +
Preference number: 4 (lower is better)
Translates to: TPFFPGERVLGLSRVAPASKTGH*AILGLT
Trigger: TGTCAGCCCCAGAATGGCTCAGTGACCTGTTTTGGA...TGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR TCA 90 bp ATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACAACCACCGCAGAGATaGTGGACGTCAGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: IGQGLRIHKDSPVLFLFQQPPQR*WTSEGW
Trigger: CCAGCCCTCTGACGTCCATCATCTCTGCGGTGGTTG...TTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp ACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTCCGCCACTCCTGGTAGATaGGCTGCGGTGCCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: TVSEWVAFVLRHSLRAASATPGR*AAVPVV
Trigger: CACCACAGGCACCGCAGCTCATCTACCAGGAGTGGC...GGAAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR TCA 90 bp CATCGGAGAACAGGGGTGGCAGGCCCGAGAGCGGTTGGTGTCTATCAGTGTGAGAGGCAAAAACGTCTTTaGCGACCCCATTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: HRRTGVAGPRAVGVYQCERQKRL*RPHSSL
Trigger: CAGGGAAGAATGGGGTCGTCAAAGACGTTTTTGCCT...CTCACACTGATAGACACCAACCGCTCTCGGGCCTGCCACCCCTGTTCTCCGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR TCA 90 bp GACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGCCCCCGTTTTATCTGTaGCTCTTTGCTCAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: DSPVLFLFQRGWTPSSHLPPFYL*LFAQGV
Trigger: TACTCCCTGAGCAAAGAGTCACAGATAAAACGGGGG...CAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584601.5
CDS-3UTR GCA 90 bp CTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTCCCCTCTCAAGTTCCAGGTTTCCCTaGACCACCTGGCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LNGSLLFLDTPLGPLPLSSSRFP*TTWQPW
Trigger: CCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGAACT...TGAGAGGGGAAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp TTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACACAATCCGCAGCCTCTaGAGTGGGACCTGCCTCACT +
Preference number: 4 (lower is better)
Translates to: LGRASESTKTPQCCSSSNTIRSL*SGTCLT
Trigger: AGTGAGGCAGGTCCCACTGCAGAGGCTGCGGATTGT...GTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp AGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTACAATCCGCAGCCTCTaGAGTGGGACCTGCCTCACT +
Preference number: 4 (lower is better)
Translates to: RIHKDSPVLFLFQRGWTPTIRSL*SGTCLT
Trigger: AGTGAGGCAGGTCCCACTGCAGAGGCTGCGGATTGT...AGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCCTGTGTTCCATCCTCTaGTGTCACCTCTTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: GKGQAGLWHPLDPRVSLGLCSIL*CHLLVV
Trigger: CACAACCAAGAGGTGACAGCAGAGGATGGAACACAG...GCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp TTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGCTGTGTTCCATCCTCTaGTGTCACCTCTTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: FFPGERVLGLSRVAPAGRLCSIL*CHLLVV
Trigger: CACAACCAAGAGGTGACAGCAGAGGATGGAACACAG...CCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp ATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAAGGGCACAGGGCTTGCTaGACTTCTCACACCGCTGTG +
Preference number: 4 (lower is better)
Translates to: IGQGLRIHKDSPVLFLFQGHRAC*TSHTAV
Trigger: CACAGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCC...TTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp TGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGCTCGCAAGTGCTCCATaGCCAGACCATAGCACACTC +
Preference number: 4 (lower is better)
Translates to: WAGPQNPQRLPSAVPLPTLASAP*PDHSTL
Trigger: GAGTGTGCTATGGTCTGGGCATGGAGCACTTGCGAG...CGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GCAGGGTCAGCGAGTAGGCGCCATTGTGCAGAATTCGTCCCCGGATTACTTGCACTCGCAAGTGCTCCATaGCCAGACCATAGCACACTC +
Preference number: 4 (lower is better)
Translates to: AGSASRRHCAEFVPGLLALASAP*PDHSTL
Trigger: GAGTGTGCTATGGTCTGGGCATGGAGCACTTGCGAG...TGCAAGTAATCCGGGGACGAATTCTGCACAATGGCGCCTACTCGCTGACCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR GCA 90 bp CCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGATTGGCACTGGTAACTaGCCTCACCTCTCGCAAGTG +
Preference number: 4 (lower is better)
Translates to: PQRLPSAVPLPTRLDPFQIGTGN*PHLSQV
Trigger: CACTTGCGAGAGGTGAGGGCAGTTACCAGTGCCAAT...CTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCATCAAACACTTGGAGCTaGTCTGGCTGGAGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: HWAGPQNPQRLPSAVPLPSNTWS*SGWSGA
Trigger: TGCCCCGCTCCAGCCAGAGCAGCTCCAAGTGTTTGA...TGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp TGGAAGGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATCGTCCCCGGATTACTTaGAGGTTCTGGAAGACGCTG +
Preference number: 4 (lower is better)
Translates to: WKERAKLGCGIHWTLESHRPRIT*RFWKTL
Trigger: CAGCGTCTTCCAGAACCTGCAAGTAATCCGGGGACG...ATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GATATTGGCACTGGTAACTGCCCTCACCTCTCGCAAGTGCTCCATGCCCAGACCCGTCCCCGGATTACTTaGAGGTTCTGGAAGACGCTG +
Preference number: 4 (lower is better)
Translates to: DIGTGNCPHLSQVLHAQTRPRIT*RFWKTL
Trigger: CAGCGTCTTCCAGAACCTGCAAGTAATCCGGGGACG...GGTCTGGGCATGGAGCACTTGCGAGAGGTGAGGGCAGTTACCAGTGCCAATATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR GCA 90 bp CTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCTGGAGCAGAGCTTGGTaGGGGTTCCGAAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LRIHKDSPVLFLFQRGWTWSRAW*GFRKSW
Trigger: CCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCA...GGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GTTCTTAGACACTCCCTTAGGGCCGCTTCCCCTCTCAGGCCAGCTTCCCTAAGGTGGCACGGCAAACAGTaGCTGGCATTCACATACTCC +
Preference number: 4 (lower is better)
Translates to: VLRHSLRAASPLRPASLRWHGKQ*LAFTYS
Trigger: GGAGTATGTGAATGCCAGGCACTGTTTGCCGTGCCA...CCTTAGGGAAGCTGGCCTGAGAGGGGAAGCGGCCCTAAGGGAGTGTCTAAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp CCCAGGTACTCTGGGTTCTCTGCCGTAGGTGTCCCTTTGAAGGTGCTGGGTGGATGGCACGGCAAACAGTaGCTGGCATTCACATACTCC +
Preference number: 4 (lower is better)
Translates to: PRYSGFSAVGVPLKVLGGWHGKQ*LAFTYS
Trigger: GGAGTATGTGAATGCCAGGCACTGTTTGCCGTGCCA...TCCACCCAGCACCTTCAAAGGGACACCTACGGCAGAGAACCCAGAGTACCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp GAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCATTCCGGATCTTCTGCTaGCGTCGCTTGATGAGGATC +
Preference number: 4 (lower is better)
Translates to: ERAKLGCGIHWTLESHWAFRIFC*RRLMRI
Trigger: GATCCTCATCAAGCGACGGCAGCAGAAGATCCGGAA...TGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp ACCCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCATTCCGGATCTTCTGCTaGCGTCGCTTGATGAGGATC +
Preference number: 4 (lower is better)
Translates to: TPFFPGERVLGLSRVAPAFRIFC*RRLMRI
Trigger: GATCCTCATCAAGCGACGGCAGCAGAAGATCCGGAA...TGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp GAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCATACTTCCGGATCTTCTaGTGCCGTCGCTTGATGAGG +
Preference number: 4 (lower is better)
Translates to: ERAKLGCGIHWTLESHWAYFRIF*CRRLMR
Trigger: CCTCATCAAGCGACGGCAGCAGAAGATCCGGAAGTA...TGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATACTTCCGGATCTTCTaGTGCCGTCGCTTGATGAGG +
Preference number: 4 (lower is better)
Translates to: QRLPSAVPLPTRLDPFQPYFRIF*CRRLMR
Trigger: CCTCATCAAGCGACGGCAGCAGAAGATCCGGAAGTA...TGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTACCAGCTCCGTTTCCTaGAGCAGTCTCCGCATCGTG +
Preference number: 4 (lower is better)
Translates to: PRVSLGRASESTKTPQCCTSSVS*SSLRIV
Trigger: CACGATGCGGAGACTGCTGCAGGAAACGGAGCTGGT...ACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp TGGACCCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTTTCAGGATCCGCATCTaGGCCTGGTTGGGCATCGCT +
Preference number: 4 (lower is better)
Translates to: WTLESHWAGPQNPQRLPSFRIRI*AWLGIA
Trigger: AGCGATGCCCAACCAGGCGCAGATGCGGATCCTGAA...ACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAAGCTGTGTCACCAGCTaGACCGTGGATGTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: HWAGPQNPQRLPSAVPLPSCVTS*TVDVRQ
Trigger: CTGCCTGACATCCACGGTGCAGCTGGTGACACAGCT...TGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp TCACACTGGCACGTCCAGACCCAGGTACTCTGGGTTCTCTGCCGTAGGTGTCCCATCCCCTTGGCAATCTaGATACACCAGTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SHWHVQTQVLWVLCRRCPIPLAI*IHQFSR
Trigger: CCTGCTGAACTGGTGTATGCAGATTGCCAAGGGGAT...GGGACACCTACGGCAGAGAACCCAGAGTACCTGGGTCTGGACGTGCCAGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp TGGAAGGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATCACCTTGCCCCCATCTaGATGGTACTCTGTCTCGTC +
Preference number: 4 (lower is better)
Translates to: WKERAKLGCGIHWTLESHHLAPI*MVLCLV
Trigger: GACGAGACAGAGTACCATGCAGATGGGGGCAAGGTG...ATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCCTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp TTTCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGAGCCCCTTCGGAGGGTaGCAGTGGAGACCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: FQGQSLNGSLLFLDTPLGSPFGG*QWRPGG
Trigger: GCCCCCAGGTCTCCACTGGCACCCTCCGAAGGGGCT...CCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp CCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGGTACTCTGGGTTCTCTaGCGTAGGTGTCCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: PILPWGESLGPFQSGTSRVLWVL*RRCPFE
Trigger: TTCAAAGGGACACCTACGGCAGAGAACCCAGAGTAC...CCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR GCA 90 bp CAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCAGTCTCTGTGCTGCACTaGGTTTGTCCTGGCCATTCT +
Preference number: 4 (lower is better)
Translates to: QRLPSAVPLPTRLDPFQPVSVLH*VCPGHS
Trigger: AGAATGGCCAGGACAAACGCAGTGCAGCACAGAGAC...TGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584601.5
CDS-3UTR GCA 90 bp CATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCATGTCACTCTCATCACTaGCTGCGCAGGCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: HWAGPQNPQRLPSAVPLPCHSHH*LRRHGC
Trigger: GCAGCCATGCCTGCGCAGGCAGTGATGAGAGTGACA...TGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584601.5
CDS-3UTR GCA 90 bp GGACCCCTTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACATGTCACTCTCATCACTaGCTGCGCAGGCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: GPLPAIWELKQEGRFLRTCHSHH*LRRHGC
Trigger: GCAGCCATGCCTGCGCAGGCAGTGATGAGAGTGACA...TGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584601.5
CDS-3UTR CCA 90 bp ATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAAGCAGGAAGGACAGGCTaGCATTGGTGGGCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: IGQGLRIHKDSPVLFLFQAGRTG*HWWAGR
Trigger: CCTACCTGCCCACCAATGCCAGCCTGTCCTTCCTGC...TTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GATATTGGCACTGGTAACTGCCCTCACCTCTCGCAAGTGCTCCATGCCCAGACCTTGTCCTCAAAGAGCTaGGTGCCTCGCACAATCCGC +
Preference number: 4 (lower is better)
Translates to: DIGTGNCPHLSQVLHAQTLSSKS*VPRTIR
Trigger: GCGGATTGTGCGAGGCACCCAGCTCTTTGAGGACAA...GGTCTGGGCATGGAGCACTTGCGAGAGGTGAGGGCAGTTACCAGTGCCAATATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp TGGACCCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTAGCTGGGGGTTCCGCTaGATCAAGACCCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: WTLESHWAGPQNPQRLPSSWGFR*IKTPPF
Trigger: GAAAGGAGGGGTCTTGATCCAGCGGAACCCCCAGCT...ACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCACCTCGGGATTGGGCATaGACTCAAACGTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: ERAKLGCGIHWTLESHWAPRDWA*TQTCLC
Trigger: ACACAGACACGTTTGAGTCCATGCCCAATCCCGAGG...TGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCACCGGCCCTCGGGATTaGGCATGGACTCAAACGTGT +
Preference number: 4 (lower is better)
Translates to: SLGRASESTKTPQCCSSSTGPRD*AWTQTC
Trigger: ACACGTTTGAGTCCATGCCCAATCCCGAGGGCCGGT...GGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GCAGCCAGCAAACTCCTGGATATTGGCACTGGTAACTGCCCTCACCTCTCGCAAACCGGCCCTCGGGATTaGGCATGGACTCAAACGTGT +
Preference number: 4 (lower is better)
Translates to: AASKLLDIGTGNCPHLSQTGPRD*AWTQTC
Trigger: ACACGTTTGAGTCCATGCCCAATCCCGAGGGCCGGT...TTGCGAGAGGTGAGGGCAGTTACCAGTGCCAATATCCAGGAGTTTGCTGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp CTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCACCGGCCCTCGGGATTaGGCATGGACTCAAACGTGT +
Preference number: 4 (lower is better)
Translates to: LRIHKDSPVLFLFQRGWTTGPRD*AWTQTC
Trigger: ACACGTTTGAGTCCATGCCCAATCCCGAGGGCCGGT...GGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp AGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTAGGCAGTCACACAGCTaGCGCCGAATGTATACCGGC +
Preference number: 4 (lower is better)
Translates to: RIHKDSPVLFLFQRGWTPRQSHS*RRMYTG
Trigger: GCCGGTATACATTCGGCGCCAGCTGTGTGACTGCCT...AGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAGGCAGTGTTGGAGGCTaGGTCCCCATCAAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: HWAGPQNPQRLPSAVPLPGSVGG*VPIKAL
Trigger: GAGAGCTTTGATGGGGACCCAGCCTCCAACACTGCC...TGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGACCCCTTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAGGCAGTGTTGGAGGCTaGGTCCCCATCAAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: GPLPAIWELKQEGRFLRTGSVGG*VPIKAL
Trigger: GAGAGCTTTGATGGGGACCCAGCCTCCAACACTGCC...TGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGGCAGTGTTGGAGGCTaGGTCCCCATCAAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: LGRASESTKTPQCCSSSNGSVGG*VPIKAL
Trigger: GAGAGCTTTGATGGGGACCCAGCCTCCAACACTGCC...GTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCCAGGTACTCTGGGTTCTCTGCCGTAGGTGTCCCTTTGAAGGTGCTGGGTGGAAGAGTCTCAAACACTTaGAGCTGCTCTGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PRYSGFSAVGVPLKVLGGRVSNT*SCSGWS
Trigger: GCTCCAGCCAGAGCAGCTCCAAGTGTTTGAGACTCT...TCCACCCAGCACCTTCAAAGGGACACCTACGGCAGAGAACCCAGAGTACCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp GGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCATTACTTGCAGGTTCTaGAAGACGCTGAGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: GKGQAGLWHPLDPRVSLGITCRF*KTLRSG
Trigger: GCCTGACCTCAGCGTCTTCCAGAACCTGCAAGTAAT...GCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGATTACTTGCAGGTTCTaGAAGACGCTGAGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: FFPGERVLGLSRVAPAGRITCRF*KTLRSG
Trigger: GCCTGACCTCAGCGTCTTCCAGAACCTGCAAGTAAT...CCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp TGGAAGGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATCAGAGGTGGGTGTTATaGTGGATGAGGGCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: WKERAKLGCGIHWTLESHQRWVL*WMRASP
Trigger: TGGACTGGCCCTCATCCACCATAACACCCACCTCTG...ATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATGCACGAAGCAGAGGTaGGTGTTATGGTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: QRLPSAVPLPTRLDPFQPCTKQR*VLWWMR
Trigger: CCTCATCCACCATAACACCCACCTCTGCTTCGTGCA...TGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp AAACTCCTGGATATTGGCACTGGTAACTGCCCTCACCTCTCGCAAGTGCTCCATGGGTTCCGAAAGAGCTaGTCCCAGGGCACCGTGTGC +
Preference number: 4 (lower is better)
Translates to: KLLDIGTGNCPHLSQVLHGFRKS*SQGTVC
Trigger: GCACACGGTGCCCTGGGACCAGCTCTTTCGGAACCC...ATGGAGCACTTGCGAGAGGTGAGGGCAGTTACCAGTGCCAATATCCAGGAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CCA 90 bp CATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAGTGTGGAGCAGAGCTTaGTGCGGGTTCCGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: HWAGPQNPQRLPSAVPLPVWSRA*CGFRKS
Trigger: GCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACAC...TGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCGTGTGGAGCAGAGCTTaGTGCGGGTTCCGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: SLGRASESTKTPQCCSSSVWSRA*CGFRKS
Trigger: GCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACAC...GGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCTGGCCCCGAAGGAACTaGCTGCAGTTGACACACTGG +
Preference number: 4 (lower is better)
Translates to: SLGRASESTKTPQCCSSSWPRRN*LQLTHW
Trigger: CCAGTGTGTCAACTGCAGCCAGTTCCTTCGGGGCCA...GGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCGCACAGGCCACACACTaGTCAGCCTCCGGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: LRIHKDSPVLFLFQRGWTAQATH*SASGPK
Trigger: TTTTGGACCGGAGGCTGACCAGTGTGTGGCCTGTGC...GGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGCACAGGCCACACACTaGTCAGCCTCCGGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: LGRASESTKTPQCCSSSNAQATH*SASGPK
Trigger: TTTTGGACCGGAGGCTGACCAGTGTGTGGCCTGTGC...GTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCCTGGAAACTTCCAGATaGGCATGTAGGAGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: GKGQAGLWHPLDPRVSLGLETSR*ACRRGQ
Trigger: CTGACCTCTCCTACATGCCCATCTGGAAGTTTCCAG...GCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CATCGGAGAACAGGGGTGGCAGGCCCGAGAGCGGTTGGTGTCTATCAGTGTGAGCTGGAAACTTCCAGATaGGCATGTAGGAGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: HRRTGVAGPRAVGVYQCELETSR*ACRRGQ
Trigger: CTGACCTCTCCTACATGCCCATCTGGAAGTTTCCAG...CTCACACTGATAGACACCAACCGCTCTCGGGCCTGCCACCCCTGTTCTCCGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp TGGAAGGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATAGGTCCACACAGGAGTaGGTGCAGTTGATGGGGCAA +
Preference number: 4 (lower is better)
Translates to: WKERAKLGCGIHWTLESHRSTQE*VQLMGQ
Trigger: TTGCCCCATCAACTGCACCCACTCCTGTGTGGACCT...ATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TTTCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGTGGACGTCAGAGGGCTaGCTCTCTGCTCGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: FQGQSLNGSLLFLDTPLGWTSEG*LSARRG
Trigger: GCCCCGCCGAGCAGAGAGCCAGCCCTCTGACGTCCA...CCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp GGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCACTTTGATGGCCACTaGAATTTTCACATTCTCCCC +
Preference number: 4 (lower is better)
Translates to: GRRALPPLDASRSQAFPAHFDGH*NFHILP
Trigger: GGGGAGAATGTGAAAATTCCAGTGGCCATCAAAGTG...AGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCACACTTTGATGGCCACTaGAATTTTCACATTCTCCCC +
Preference number: 4 (lower is better)
Translates to: PGERVLGLSRVAPAGRAAHFDGH*NFHILP
Trigger: GGGGAGAATGTGAAAATTCCAGTGGCCATCAAAGTG...TGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp GCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGACACTTTGATGGCCACTaGAATTTTCACATTCTCCCC +
Preference number: 4 (lower is better)
Translates to: AGSPGSGRRALPPLDASRHFDGH*NFHILP
Trigger: GGGGAGAATGTGAAAATTCCAGTGGCCATCAAAGTG...TCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGACCCCTTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAAAGGCGGGAGACATATaGGGAGCCCACACCAGCCAT +
Preference number: 4 (lower is better)
Translates to: GPLPAIWELKQEGRFLRTKAGDI*GAHTSH
Trigger: ATGGCTGGTGTGGGCTCCCCATATGTCTCCCGCCTT...TGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp AGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCAAGGCGGGAGACATATaGGGAGCCCACACCAGCCAT +
Preference number: 4 (lower is better)
Translates to: SLIGQGLRIHKDSPVLFLKAGDI*GAHTSH
Trigger: ATGGCTGGTGTGGGCTCCCCATATGTCTCCCGCCTT...GAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGTAGCTCATCCCCTTaGCAATCTGCATACACCAGT +
Preference number: 4 (lower is better)
Translates to: DSPVLFLFQRGWTPSSHLGSSSP*QSAYTS
Trigger: ACTGGTGTATGCAGATTGCCAAGGGGATGAGCTACC...CAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCTCTGTAATTTTGACATaGTTGGGACTCTTGACCAGC +
Preference number: 4 (lower is better)
Translates to: GERVLGLSRVAPAGRAAGSVILT*LGLLTS
Trigger: GCTGGTCAAGAGTCCCAACCATGTCAAAATTACAGA...GCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp GACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGTTGCCCCCATCTGCATaGTACTCTGTCTCGTCAATG +
Preference number: 4 (lower is better)
Translates to: DSPVLFLFQRGWTPSSHLLPPSA*YSVSSM
Trigger: CATTGACGAGACAGAGTACCATGCAGATGGGGGCAA...CAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTACCGCCGGCGGAGAATaGACTCCAGCGCCATCCACT +
Preference number: 4 (lower is better)
Translates to: GQSLNGSLLFLDTPLGPLTAGGE*TPAPST
Trigger: AGTGGATGGCGCTGGAGTCCATTCTCCGCCGGCGGT...AAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp GGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTTCCCATCGTAAGGTTTaGCCCCAAAAGTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: GSPGSGRRALPPLDASRSSHRKV*PQKSSA
Trigger: AGCTGATGACTTTTGGGGCCAAACCTTACGATGGGA...ACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCAACTCCCGGAATCTTaGCCGACATTCAGAGTCAAT +
Preference number: 4 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSQLPES*PTFRVN
Trigger: ATTGACTCTGAATGTCGGCCAAGATTCCGGGAGTTG...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp ACCCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCACCCAAGTCCTCATTCTaGATGACCACAAAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: TPFFPGERVLGLSRVAPAPKSSF*MTTKRW
Trigger: CCAGCGCTTTGTGGTCATCCAGAATGAGGACTTGGG...TGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp TCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCGTCCAAGGGACTGGCTaGGCCCAAGTCCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: SLGRASESTKTPQCCSSSVQGTG*AQVLIL
Trigger: CAGAATGAGGACTTGGGCCCAGCCAGTCCCTTGGAC...GGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGACCCCTTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAGTCCAAGGGACTGGCTaGGCCCAAGTCCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: GPLPAIWELKQEGRFLRTVQGTG*AQVLIL
Trigger: CAGAATGAGGACTTGGGCCCAGCCAGTCCCTTGGAC...TGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATCTTTGAGCTGCGGTGCCTGTaGTGGACCATGCCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: HLPPHTTPILPLGLYFIFELRCL*WTMPPA
Trigger: CGCTGGGGGCATGGTCCACCACAGGCACCGCAGCTC...AAAGATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR CCA 90 bp TCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGTGCCAGTGGAGACCTaGGGGCCTCCTCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: SGTVSEWVAFVLRHSLRAVPVET*GPPLQR
Trigger: CCTCTGAAGAGGAGGCCCCCAGGTCTCCACTGGCAC...GGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp CCCACACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATGGCTTTGCAGCCCCTTaGCTGCCCCCATTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: PTLASPYNTHSPPGSLFHGFAAP*LPPFPG
Trigger: ACCTGGGAATGGGGGCAGCCAAGGGGCTGCAAAGCC...ATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR CCA 90 bp AAACTCCTGGATATTGGCACTGGTAACTGCCCTCACCTCTCGCAAGTGCTCCATGGCTTTGCAGCCCCTTaGCTGCCCCCATTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: KLLDIGTGNCPHLSQVLHGFAAP*LPPFPG
Trigger: ACCTGGGAATGGGGGCAGCCAAGGGGCTGCAAAGCC...ATGGAGCACTTGCGAGAGGTGAGGGCAGTTACCAGTGCCAATATCCAGGAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp TCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGGCTGGGGTCATGTGTaGGGAGGCTTTGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SGTVSEWVAFVLRHSLRAGWGHV*GGFAAP
Trigger: AGGGGCTGCAAAGCCTCCCCACACATGACCCCAGCC...GGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp TCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCTTCACATATTCAGGCTaGGGGCTGCAGGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: SLGRASESTKTPQCCSSSFTYSG*GLQVRG
Trigger: CCCCCTGACCTGCAGCCCCCAGCCTGAATATGTGAA...GGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTTCACATATTCAGGCTaGGGGCTGCAGGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PRVSLGRASESTKTPQCCFTYSG*GLQVRG
Trigger: CCCCCTGACCTGCAGCCCCCAGCCTGAATATGTGAA...ACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GTTCTTAGACACTCCCTTAGGGCCGCTTCCCCTCTCAGGCCAGCTTCCCTAAGGCTGGGGCCGAACATCTaGCTGGTTCACATATTCAGG +
Preference number: 4 (lower is better)
Translates to: VLRHSLRAASPLRPASLRLGPNI*LVHIFR
Trigger: CCTGAATATGTGAACCAGCCAGATGTTCGGCCCCAG...CCTTAGGGAAGCTGGCCTGAGAGGGGAAGCGGCCCTAAGGGAGTGTCTAAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp CCCACACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATTGGGCCTTTCCAGAGTaGCACCAGCAGGTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: PTLASPYNTHSPPGSLFHWAFPE*HQQVGQ
Trigger: CTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCA...ATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR CCA 90 bp GGACCCCTTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAGACCCCATTCTTCCCTaGGGAGAGAGTCTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GPLPAIWELKQEGRFLRTDPILP*GESLGP
Trigger: AGGCCCAAGACTCTCTCCCCAGGGAAGAATGGGGTC...TGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp AGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTGCGGACTTGGCCTTCTaGTTCACACTGGCACGTCCA +
Preference number: 4 (lower is better)
Translates to: RIHKDSPVLFLFQRGWTPADLAF*FTLARP
Trigger: TGGACGTGCCAGTGTGAACCAGAAGGCCAAGTCCGC...AGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTGGGCTTCTGCGGACTTaGCCTTCTGGTTCACACTGG +
Preference number: 4 (lower is better)
Translates to: PRVSLGRASESTKTPQCCGLLRT*PSGSHW
Trigger: CCAGTGTGAACCAGAAGGCCAAGTCCGCAGAAGCCC...ACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGGGCTTCTGCGGACTTaGCCTTCTGGTTCACACTGG +
Preference number: 4 (lower is better)
Translates to: LGRASESTKTPQCCSSSNGLLRT*PSGSHW
Trigger: CCAGTGTGAACCAGAAGGCCAAGTCCGCAGAAGCCC...GTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGACCCTAGAGTCTCATTaGGCAGGGCCTCAGAATCCA +
Preference number: 4 (lower is better)
Translates to: PQRLPSAVPLPTRLDPFQTLESH*AGPQNP
Trigger: TGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGT...CTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCAGCTGTTCCTTCCTCATaGGGGGCAGTACTAGGTTTC +
Preference number: 4 (lower is better)
Translates to: QRLPSAVPLPTRLDPFQPAVPSS*GAVLGF
Trigger: GAAACCTAGTACTGCCCCCCATGAGGAAGGAACAGC...TGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp TGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGACTCTGTACAAAGCCTaGATACTGACACCATTGCTG +
Preference number: 4 (lower is better)
Translates to: WGESLGPFQSGTSRSGSRTLYKA*ILTPLL
Trigger: CAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGT...CCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp CCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGTATCGCCTCGATATATaGACACAGCAGGGGGACGAG +
Preference number: 4 (lower is better)
Translates to: PQRLPSAVPLPTRLDPFQYRLDI*TQQGDE
Trigger: CTCGTCCCCCTGCTGTGTCCATATATCGAGGCGATA...CTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000584601.5
3UTR CAA 72 bp GTAGGCGCCATTGTGCAGAATTCGTCCCCGGATTACTaGCAGGTTCTGGAAGACGCTGAGGTCAGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: VGAIVQNSSPDY*QVLEDAEVRQA
Trigger: AGCCTGCCTGACCTCAGCGTCTTCCAGAACCTGCAAGTAATCCGGGGACGAATTCTGCACAATGGCGCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR TCA 90 bp CCAGGCTCCCAAAGATCTTCTTGCAGCCAGCAAACTCCTGGATATTGGCACTGGTGGTGGGCAGGTAGGTaGGTTCCAGGTTTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: PGSQRSSCSQQTPGYWHWWWAGR*VPGFPA
Trigger: TGCAGGGAAACCTGGAACTCACCTACCTGCCCACCA...CCAGTGCCAATATCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR TCA 90 bp CCGGCCCTCGGGATTGGGCATGGACTCAAACGTGTCTGTGTTGTAGGTGACCAGCTTTCAAGATCTCTGTaGGGCTTCGAAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PALGIGHGLKRVCVVGDQLSRSL*GFEAAA
Trigger: AGCTGCAGCTTCGAAGCCTCACAGAGATCTTGAAAG...CTGGTCACCTACAACACAGACACGTTTGAGTCCATGCCCAATCCCGAGGGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR TCA 90 bp GAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCATGGTGTCTATCAGTGTaGGAGCCAGCTGGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: ERAKLGCGIHWTLESHWAWCLSV*EPAGCS
Trigger: AGAACAACCAGCTGGCTCTCACACTGATAGACACCA...TGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp CCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGTGTATAGGTAACCTGTaGTCTCTTCCAGAGTCTCAA +
Preference number: 4 (lower is better)
Translates to: PLEVVGGPSHLLMPAEVRCIGNL*SLPESQ
Trigger: TTGAGACTCTGGAAGAGATCACAGGTTACCTATACA...CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp GGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCATGTATAGGTAACCTGTaGTCTCTTCCAGAGTCTCAA +
Preference number: 4 (lower is better)
Translates to: GRESWAFPEWHQQVGQQACIGNL*SLPESQ
Trigger: TTGAGACTCTGGAAGAGATCACAGGTTACCTATACA...TGCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR TCA 90 bp AATGCCAGGCTCCCAAAGATCTTCTTGCAGCCAGCAAACTCCTGGATATTGGCAGGTTCTGGAAGACGCTaGGGTCAGGCAGGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: NARLPKIFLQPANSWILAGSGRR*GQAGCP
Trigger: CGGACAGCCTGCCTGACCTCAGCGTCTTCCAGAACC...TGCCAATATCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAGCCTGGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR TCA 90 bp CCCACACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATGGGTGTTATGGTGGATaGGGGCCAGTCCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: PTLASPYNTHSPPGSLFHGCYGG*GPVHCP
Trigger: TGGGCAGTGGACTGGCCCTCATCCACCATAACACCC...ATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR TCA 90 bp ACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTCCGGGTGTTATGGTGGATaGGGGCCAGTCCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: TVSEWVAFVLRHSLRAASGCYGG*GPVHCP
Trigger: TGGGCAGTGGACTGGCCCTCATCCACCATAACACCC...GGAAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR TCA 90 bp TGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGTCCAAAACAGGTCACTaGGCCATTCTGGGGCTGACA +
Preference number: 4 (lower is better)
Translates to: WAGPQNPQRLPSAVPLPTSKTGH*AILGLT
Trigger: TGTCAGCCCCAGAATGGCTCAGTGACCTGTTTTGGA...CGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp GGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCAGGGCCTTTCCCTCAACACTTTaGTGGCCACTGGAATTTTCA +
Preference number: 4 (lower is better)
Translates to: GQAGLWHPLDPRVSLGRAFPSTL*WPLEFS
Trigger: TGAAAATTCCAGTGGCCATCAAAGTGTTGAGGGAAA...GGCCCTGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp AGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCAGTCCTCATTCTGGATaGCCACAAAGCGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: SLIGQGLRIHKDSPVLFLSPHSG*PQSAGG
Trigger: ACCCCCAGCGCTTTGTGGTCATCCAGAATGAGGACT...GAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp GGACCCCTTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAAGTCCTCATTCTGGATaGCCACAAAGCGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: GPLPAIWELKQEGRFLRTSPHSG*PQSAGG
Trigger: ACCCCCAGCGCTTTGTGGTCATCCAGAATGAGGACT...TGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp AGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTAGTCCTCATTCTGGATaGCCACAAAGCGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: RIHKDSPVLFLFQRGWTPSPHSG*PQSAGG
Trigger: ACCCCCAGCGCTTTGTGGTCATCCAGAATGAGGACT...AGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp AATGCCAGGCTCCCAAAGATCTTCTTGCAGCCAGCAAACTCCTGGATATTGGCAGCCACTCCTGGTAGATaGGCTGCGGTGCCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: NARLPKIFLQPANSWILAATPGR*AAVPVV
Trigger: CACCACAGGCACCGCAGCTCATCTACCAGGAGTGGC...TGCCAATATCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAGCCTGGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR TCA 90 bp ACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTCCGCCTTCCCTGCTCCCTaGGGACACATCAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: TVSEWVAFVLRHSLRAASAFPAP*GHIRAS
Trigger: AGAAGCCCTGATGTGTCCTCAGGGAGCAGGGAAGGC...GGAAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR TCA 90 bp GACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGTTCAGGGACAGTCTCTaGATGGGTCGCTTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: DSPVLFLFQRGWTPSSHLFRDSL*MGRFCS
Trigger: AGAACAAAAGCGACCCATTCAGAGACTGTCCCTGAA...CAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR TCA 90 bp TTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAGGTTCCTATGGCTGCCAGGGTCTaGGTCTCTGTGCTGCACTGC +
Preference number: 4 (lower is better)
Translates to: FQPSGNSSRKEGSLGQVPMAARV*VSVLHC
Trigger: GCAGTGCAGCACAGAGACTCAGACCCTGGCAGCCAT...AGGAACCTGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584601.5
CDS-3UTR GCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCTGGGCAGTGGCCCCTTaGAGCGGGCACAGCCACCGG +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPWAVAP*SGHSHR
Trigger: CCGGTGGCTGTGCCCGCTGCAAGGGGCCACTGCCCA...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp GGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTGGGCACAGGGCTTGCTaGACTTCTCACACCGCTGTG +
Preference number: 4 (lower is better)
Translates to: GQSLNGSLLFLDTPLGPLGHRAC*TSHTAV
Trigger: CACAGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCC...AAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp TCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCCTCGCAAGTGCTCCATaGCCAGACCATAGCACACTC +
Preference number: 4 (lower is better)
Translates to: SLGRASESTKTPQCCSSSLASAP*PDHSTL
Trigger: GAGTGTGCTATGGTCTGGGCATGGAGCACTTGCGAG...GGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp AGGGCCGCTTCCCCTCTCAGGCCAGCTTCCCTAAGGCTTTCAGTACCCAGGATCTCCCAAAGATCTTCTTaGAGCCAGCAAACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: RAASPLRPASLRLSVPRISQRSS*SQQTPG
Trigger: TCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGA...GATCCTGGGTACTGAAAGCCTTAGGGAAGCTGGCCTGAGAGGGGAAGCGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp ATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAATCAAACACTTGGAGCTaGTCTGGCTGGAGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: IGQGLRIHKDSPVLFLFQSNTWS*SGWSGA
Trigger: TGCCCCGCTCCAGCCAGAGCAGCTCCAAGTGTTTGA...TTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp TTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACCGTCCCCGGATTACTTaGAGGTTCTGGAAGACGCTG +
Preference number: 4 (lower is better)
Translates to: LGRASESTKTPQCCSSSNRPRIT*RFWKTL
Trigger: CAGCGTCTTCCAGAACCTGCAAGTAATCCGGGGACG...GTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCCCTGGACCCCAGCAGTaGCCTCGGGCGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPPGPQQ*PRAHSW
Trigger: CCAGCTGTGCGCCCGAGGGCACTGCTGGGGTCCAGG...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp CAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGTTCCTTCCTAGAGGGCTGGCTCTCTaGTCGGCGGGGCAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: QKSTLYKAWILTPLLFLPRGLAL*SAGQPL
Trigger: CAAGGGCTGCCCCGCCGAGCAGAGAGCCAGCCCTCT...AGGAAGGAACAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp TGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGTACTTCCGGATCTTCTaGTGCCGTCGCTTGATGAGG +
Preference number: 4 (lower is better)
Translates to: WAGPQNPQRLPSAVPLPTYFRIF*CRRLMR
Trigger: CCTCATCAAGCGACGGCAGCAGAAGATCCGGAAGTA...CGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp TCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCTGGATGTCAGGCAGATaGCCAGAAGGCGGGAGACAT +
Preference number: 4 (lower is better)
Translates to: SLGRASESTKTPQCCSSSWMSGR*PEGGRH
Trigger: ATGTCTCCCGCCTTCTGGGCATCTGCCTGACATCCA...GGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCACCTTGCCCCCATCTaGATGGTACTCTGTCTCGTC +
Preference number: 4 (lower is better)
Translates to: LRIHKDSPVLFLFQRGWTHLAPI*MVLCLV
Trigger: GACGAGACAGAGTACCATGCAGATGGGGGCAAGGTG...GGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GGACCCCTTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACACACCTTGCCCCCATCTaGATGGTACTCTGTCTCGTC +
Preference number: 4 (lower is better)
Translates to: GPLPAIWELKQEGRFLRTHLAPI*MVLCLV
Trigger: GACGAGACAGAGTACCATGCAGATGGGGGCAAGGTG...TGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp TTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAGGTTCCTGGGGGTCCCTGGCCATaGGGGAGAATTCAGACACCA +
Preference number: 4 (lower is better)
Translates to: FQPSGNSSRKEGSLGQVPGGPWP*GRIQTP
Trigger: TGGTGTCTGAATTCTCCCGCATGGCCAGGGACCCCC...AGGAACCTGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp ACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTCCGTAGATGAGCTGCGGTaGCTGTGGTGGACCATGCCC +
Preference number: 4 (lower is better)
Translates to: TVSEWVAFVLRHSLRAASVDELR*LWWTMP
Trigger: GGGCATGGTCCACCACAGGCACCGCAGCTCATCTAC...GGAAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp CAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCAACAAAGACTCCCCAGTaGTGTTCCTCTTCCAACGAG +
Preference number: 4 (lower is better)
Translates to: QRLPSAVPLPTRLDPFQPTKTPQ*CSSSNE
Trigger: CTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGT...TGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCATCTGAGTCTCTGTGCTaGACTGCGTTTGTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: HWAGPQNPQRLPSAVPLPSESLC*TAFVLA
Trigger: GGCCAGGACAAACGCAGTGCAGCACAGAGACTCAGA...TGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584601.5
CDS-3UTR GCA 90 bp AGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTGCAGCTTCATGTCTGTaGCGGTGCACACTTGTGGCT +
Preference number: 4 (lower is better)
Translates to: RIHKDSPVLFLFQRGWTPAASCL*RCTLVA
Trigger: AGCCACAAGTGTGCACCGGCACAGACATGAAGCTGC...AGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000541774.5
ENST00000584601.5
CDS-3UTR GCA 90 bp TGGACCCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCAGCTTCATGTCTGTaGCGGTGCACACTTGTGGCT +
Preference number: 4 (lower is better)
Translates to: WTLESHWAGPQNPQRLPSAASCL*RCTLVA
Trigger: AGCCACAAGTGTGCACCGGCACAGACATGAAGCTGC...ACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000541774.5
ENST00000584601.5
CDS-3UTR GCA 90 bp ATGGCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCGAAAACACTTCAGTTTaGTCATTAACCCATCAGGCG +
Preference number: 4 (lower is better)
Translates to: MAGSPGSGRRALPPLDASENTSV*SLTHQA
Trigger: CGCCTGATGGGTTAATGAGCAAACTGAAGTGTTTTC...GCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584601.5
CDS-3UTR CCA 90 bp TTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAGGTTCCTGCAGGAAGGACAGGCTaGCATTGGTGGGCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: FQPSGNSSRKEGSLGQVPAGRTG*HWWAGR
Trigger: CCTACCTGCCCACCAATGCCAGCCTGTCCTTCCTGC...AGGAACCTGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TCTGTCTCGTCAATGTCCAGCAGCCGAGCCAGCCCGAAGTCTGTAATTTTGACAGCAGGAAGGACAGGCTaGCATTGGTGGGCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: SVSSMSSSRASPKSVILTAGRTG*HWWAGR
Trigger: CCTACCTGCCCACCAATGCCAGCCTGTCCTTCCTGC...TGTCAAAATTACAGACTTCGGGCTGGCTCGGCTGCTGGACATTGACGAGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp TCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCTTGTCCTCAAAGAGCTaGGTGCCTCGCACAATCCGC +
Preference number: 4 (lower is better)
Translates to: SLGRASESTKTPQCCSSSLSSKS*VPRTIR
Trigger: GCGGATTGTGCGAGGCACCCAGCTCTTTGAGGACAA...GGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCCTCCCGCAGGCCTCCTaGGGAGGCCCCTGTGACAGG +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPLPQAS*GGPCDR
Trigger: CCTGTCACAGGGGCCTCCCCAGGAGGCCTGCGGGAG...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp CTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTCCCCTCTCAAGCTGGGGGTTCCGCTaGATCAAGACCCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: LNGSLLFLDTPLGPLPLSSWGFR*IKTPPF
Trigger: GAAAGGAGGGGTCTTGATCCAGCGGAACCCCCAGCT...TGAGAGGGGAAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp GCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGCTGGTTGTTCTTGTaGAAGATGTCCTTCCACAAA +
Preference number: 4 (lower is better)
Translates to: AGSPGSGRRALPPLDASRSWLFL*KMSFHK
Trigger: TTTGTGGAAGGACATCTTCCACAAGAACAACCAGCT...TCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGAGTGTGAGAGCCAGCTaGTTGTTCTTGTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: PILPWGESLGPFQSGTSRSVRAS*LFLWKM
Trigger: CATCTTCCACAAGAACAACCAGCTGGCTCTCACACT...CCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp GGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCCAGCCAGCAAACTCCTaGATATTGGCACTGGTAACT +
Preference number: 4 (lower is better)
Translates to: GKGQAGLWHPLDPRVSLGQPANS*ILALVT
Trigger: AGTTACCAGTGCCAATATCCAGGAGTTTGCTGGCTG...GCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GAAACTTCCAGATGGGCATGTAGGAGAGGTCAGGTTTCACACCGCTGGGGCAGCAGAGTCTCAAACACTTaGAGCTGCTCTGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: ETSRWACRRGQVSHRWGSRVSNT*SCSGWS
Trigger: GCTCCAGCCAGAGCAGCTCCAAGTGTTTGAGACTCT...GCTGCCCCAGCGGTGTGAAACCTGACCTCTCCTACATGCCCATCTGGAAGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp ACTCGGGCACAGGGCTTGCTGCACTTCTCACACCGCTGTGTTCCATCCTCTGCTATTACTTGCAGGTTCTaGAAGACGCTGAGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: TRAQGLLHFSHRCVPSSAITCRF*KTLRSG
Trigger: GCCTGACCTCAGCGTCTTCCAGAACCTGCAAGTAAT...AGCAGAGGATGGAACACAGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CCA 90 bp AGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCAGGTGGGTGTTATGGTaGATGAGGGCCAGTCCACTG +
Preference number: 4 (lower is better)
Translates to: SLIGQGLRIHKDSPVLFLRWVLW*MRASPL
Trigger: CAGTGGACTGGCCCTCATCCACCATAACACCCACCT...GAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGACCCCTTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACACAGAGGTGGGTGTTATaGTGGATGAGGGCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: GPLPAIWELKQEGRFLRTQRWVL*WMRASP
Trigger: TGGACTGGCCCTCATCCACCATAACACCCACCTCTG...TGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CAGTCTCCGCATCGTGTACTTCCGGATCTTCTGCTGCCGTCGCTTGATGAGGATCAGAGGTGGGTGTTATaGTGGATGAGGGCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: QSPHRVLPDLLLPSLDEDQRWVL*WMRASP
Trigger: TGGACTGGCCCTCATCCACCATAACACCCACCTCTG...ATCCTCATCAAGCGACGGCAGCAGAAGATCCGGAAGTACACGATGCGGAGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp CCCACACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATCGTCCTCTGGCCGGTTaGCAGTGTGGAGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: PTLASPYNTHSPPGSLFHRPLAG*QCGAEL
Trigger: AAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACG...ATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR CCA 90 bp TTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAGGTTCCTCGTCCTCTGGCCGGTTaGCAGTGTGGAGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: FQPSGNSSRKEGSLGQVPRPLAG*QCGAEL
Trigger: AAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACG...AGGAACCTGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGTTCCTTCCTTGGACGTCAGAGGGCTaGCTCTCTGCTCGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: QKSTLYKAWILTPLLFLPWTSEG*LSARRG
Trigger: GCCCCGCCGAGCAGAGAGCCAGCCCTCTGACGTCCA...AGGAAGGAACAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp GGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTATCCGCATCTGCGCCTaGTTGGGCATCGCTCCGCTA +
Preference number: 4 (lower is better)
Translates to: GQSLNGSLLFLDTPLGPLIRICA*LGIAPL
Trigger: TAGCGGAGCGATGCCCAACCAGGCGCAGATGCGGAT...AAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp ATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAAAAGGCGGGAGACATATaGGGAGCCCACACCAGCCAT +
Preference number: 4 (lower is better)
Translates to: IGQGLRIHKDSPVLFLFQKAGDI*GAHTSH
Trigger: ATGGCTGGTGTGGGCTCCCCATATGTCTCCCGCCTT...TTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp ACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGTCCCATCGTAAGGTTTaGCCCCAAAAGTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: TPQCCSSSNEAGPLPAIWSHRKV*PQKSSA
Trigger: AGCTGATGACTTTTGGGGCCAAACCTTACGATGGGA...CCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp AACTGCCCTCACCTCTCGCAAGTGCTCCATGCCCAGACCATAGCACACTCGGGCTCCCATCGTAAGGTTTaGCCCCAAAAGTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: NCPHLSQVLHAQTIAHSGSHRKV*PQKSSA
Trigger: AGCTGATGACTTTTGGGGCCAAACCTTACGATGGGA...GCCCGAGTGTGCTATGGTCTGGGCATGGAGCACTTGCGAGAGGTGAGGGCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp CCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTAGGGATCTCCCGGGCTaGGATCCCATCGTAAGGTTT +
Preference number: 4 (lower is better)
Translates to: PRVSLGRASESTKTPQCCRDLPG*DPIVRF
Trigger: AAACCTTACGATGGGATCCCAGCCCGGGAGATCCCT...ACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTCCCCTCTCAGACCCCATTCTTCCCTaGGGAGAGAGTCTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LNGSLLFLDTPLGPLPLSDPILP*GESLGP
Trigger: AGGCCCAAGACTCTCTCCCCAGGGAAGAATGGGGTC...TGAGAGGGGAAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp GGACCCCTTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACACAGACCCAGGTACTCTaGGTTCTCTGCCGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: GPLPAIWELKQEGRFLRTQTQVL*VLCRRC
Trigger: ACACCTACGGCAGAGAACCCAGAGTACCTGGGTCTG...TGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCACAGACCCAGGTACTCTaGGTTCTCTGCCGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: HWAGPQNPQRLPSAVPLPQTQVL*VLCRRC
Trigger: ACACCTACGGCAGAGAACCCAGAGTACCTGGGTCTG...TGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTCCTTCTGGTTCACACTaGCACGTCCAGACCCAGGTA +
Preference number: 4 (lower is better)
Translates to: PRVSLGRASESTKTPQCCPSGSH*HVQTQV
Trigger: TACCTGGGTCTGGACGTGCCAGTGTGAACCAGAAGG...ACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp ATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAAGCGGACTTGGCCTTCTaGTTCACACTGGCACGTCCA +
Preference number: 4 (lower is better)
Translates to: IGQGLRIHKDSPVLFLFQADLAF*FTLARP
Trigger: TGGACGTGCCAGTGTGAACCAGAAGGCCAAGTCCGC...TTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGGCCAAGCTGGGCTGTaGCATCCACTGGACCCTAGA +
Preference number: 4 (lower is better)
Translates to: SGTVSEWVAFVLRHSLRAGQAGL*HPLDPR
Trigger: TCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCC...GGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp CGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCCCGGACAGAATGGTTCCTaGTCACAATATTTTCGGATT +
Preference number: 4 (lower is better)
Translates to: RRALPPLDASRSQAFPAPGQNGS*SQYFRI
Trigger: AATCCGAAAATATTGTGACCAGGAACCATTCTGTCC...GGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406381.6
CDS-3UTR CCA 90 bp ACCCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCATTTCTCCGGTCCCAATaGAGGGGAATCTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: TPFFPGERVLGLSRVAPAFLRSQ*RGISAS
Trigger: TGAAGCTGAGATTCCCCTCCATTGGGACCGGAGAAA...TGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000584450.5
CDS-3UTR TCA 90 bp TCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCCTTGGTTGTGAGCGATaGGCACGTAGCCCTGCACCT +
Preference number: 4 (lower is better)
Translates to: SGTVSEWVAFVLRHSLRALGCER*ARSPAP
Trigger: AGGTGCAGGGCTACGTGCTCATCGCTCACAACCAAG...GGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR TCA 90 bp TCCTCTGGCCGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCTGTATAGGTAACCTGTaGTCTCTTCCAGAGTCTCAA +
Preference number: 4 (lower is better)
Translates to: SSGRLAVWSRAWCGFRKSCIGNL*SLPESQ
Trigger: TTGAGACTCTGGAAGAGATCACAGGTTACCTATACA...GCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR TCA 90 bp CTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGTGTATAGGTAACCTGTaGTCTCTTCCAGAGTCTCAA +
Preference number: 4 (lower is better)
Translates to: LPSAVPLPTRLDPFQPSGCIGNL*SLPESQ
Trigger: TTGAGACTCTGGAAGAGATCACAGGTTACCTATACA...CCCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCGCCCAGTTCCCTCAGTaGGCGCAGCCCCAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPAQFPQ*AQPQPA
Trigger: AGCTGGCTGGGGCTGCGCTCACTGAGGGAACTGGGC...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR TCA 90 bp CAGCGAGTAGGCGCCATTGTGCAGAATTCGTCCCCGGATTACTTGCAGGTTCTGTCCAAAACAGGTCACTaGGCCATTCTGGGGCTGACA +
Preference number: 4 (lower is better)
Translates to: QRVGAIVQNSSPDYLQVLSKTGH*AILGLT
Trigger: TGTCAGCCCCAGAATGGCTCAGTGACCTGTTTTGGA...CAGAACCTGCAAGTAATCCGGGGACGAATTCTGCACAATGGCGCCTACTCGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR TCA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCTTTCCCTCAACACTTTaGTGGCCACTGGAATTTTCA +
Preference number: 4 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSFPSTL*WPLEFS
Trigger: TGAAAATTCCAGTGGCCATCAAAGTGTTGAGGGAAA...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp TTTCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCATCACTCTGGTGGGTaGACCGCCGGCGGAGAATGG +
Preference number: 4 (lower is better)
Translates to: FQGQSLNGSLLFLDTPLGHHSGG*TAGGEW
Trigger: CCATTCTCCGCCGGCGGTTCACCCACCAGAGTGATG...CCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR TCA 90 bp TCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCATCGTCCTCCAGCAGTaGGCGGTAGAAGGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: SGTVSEWVAFVLRHSLRAIVLQQ*AVEGAV
Trigger: GACAGCACCTTCTACCGCTCACTGCTGGAGGACGAT...GGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR TCA 90 bp CCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGTTCAGGGACAGTCTCTaGATGGGTCGCTTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: PQRLPSAVPLPTRLDPFQFRDSL*MGRFCS
Trigger: AGAACAAAAGCGACCCATTCAGAGACTGTCCCTGAA...CTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR TCA 90 bp CCCAGGTACTCTGGGTTCTCTGCCGTAGGTGTCCCTTTGAAGGTGCTGGGTGGATTCAGGGACAGTCTCTaGATGGGTCGCTTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: PRYSGFSAVGVPLKVLGGFRDSL*MGRFCS
Trigger: AGAACAAAAGCGACCCATTCAGAGACTGTCCCTGAA...TCCACCCAGCACCTTCAAAGGGACACCTACGGCAGAGAACCCAGAGTACCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR TCA 90 bp GGACCCCTTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACACTGGAGGTAGAGTGGTaGACAGGACAGCAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: GPLPAIWELKQEGRFLRTLEVEW*TGQQRF
Trigger: GAACCTTTGCTGTCCTGTTCACCACTCTACCTCCAG...TGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584601.5
CDS-3UTR GCA 90 bp TTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAGGTTCCTGCAGCTTCATGTCTGTaGCGGTGCACACTTGGGTGC +
Preference number: 4 (lower is better)
Translates to: FQPSGNSSRKEGSLGQVPAASCL*RCTLGC
Trigger: GCACCCAAGTGTGCACCGGCACAGACATGAAGCTGC...AGGAACCTGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269571.10
ENST00000578373.5
CDS-3UTR GCA 90 bp ACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTCCCACCGGCACAGACAGTaGGCGTCAGGCTCTGACAAT +
Preference number: 4 (lower is better)
Translates to: TVSEWVAFVLRHSLRAASHRHRQ*ASGSDN
Trigger: ATTGTCAGAGCCTGACGCGCACTGTCTGTGCCGGTG...GGAAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp CCCACACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATCACCGGCACAGACAGTaGGCGTCAGGCTCTGACAAT +
Preference number: 4 (lower is better)
Translates to: PTLASPYNTHSPPGSLFHHRHRQ*ASGSDN
Trigger: ATTGTCAGAGCCTGACGCGCACTGTCTGTGCCGGTG...ATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR GCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCGCCAGGCAGTCAGAGTaGTTGGGGCCCGTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPARQSE*LGPVQP
Trigger: CGGCTGCACGGGCCCCAAGCACTCTGACTGCCTGGC...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp GATATTGGCACTGGTAACTGCCCTCACCTCTCGCAAGTGCTCCATGCCCAGACCCTGTGTTCCATCCTCTaGTGTCACCTCTTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: DIGTGNCPHLSQVLHAQTLCSIL*CHLLVV
Trigger: CACAACCAAGAGGTGACAGCAGAGGATGGAACACAG...GGTCTGGGCATGGAGCACTTGCGAGAGGTGAGGGCAGTTACCAGTGCCAATATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR GCA 90 bp TGGACCCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTCTCCGGCAGAAATaGCAGGCTCCCAAAGATCTT +
Preference number: 4 (lower is better)
Translates to: WTLESHWAGPQNPQRLPSALRQK*QAPKDL
Trigger: AAGATCTTTGGGAGCCTGGCATTTCTGCCGGAGAGC...ACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp ATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGTCCCCGGATTACTTaGAGGTTCTGGAAGACGCTG +
Preference number: 4 (lower is better)
Translates to: IGQGLRIHKDSPVLFLFQRPRIT*RFWKTL
Trigger: CAGCGTCTTCCAGAACCTGCAAGTAATCCGGGGACG...TTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp ATGCCAGGCTCCCAAAGATCTTCTTGCAGCCAGCAAACTCCTGGATATTGGCACTGGAGCAGAGCTTGGTaGGGGTTCCGAAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: MPGSQRSSCSQQTPGYWHWSRAW*GFRKSW
Trigger: CCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCA...GTGCCAATATCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAGCCTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR GCA 90 bp ACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTCCACCAGCTCCGTTTCCTaGAGCAGTCTCCGCATCGTG +
Preference number: 4 (lower is better)
Translates to: TVSEWVAFVLRHSLRAASTSSVS*SSLRIV
Trigger: CACGATGCGGAGACTGCTGCAGGAAACGGAGCTGGT...GGAAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp CCAGGCTCCCAAAGATCTTCTTGCAGCCAGCAAACTCCTGGATATTGGCACTGGCACCTTGCCCCCATCTaGATGGTACTCTGTCTCGTC +
Preference number: 4 (lower is better)
Translates to: PGSQRSSCSQQTPGYWHWHLAPI*MVLCLV
Trigger: GACGAGACAGAGTACCATGCAGATGGGGGCAAGGTG...CCAGTGCCAATATCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAGCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR GCA 90 bp TTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACACACATCAGGGCTTCTaGGGACTTGGCCTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: LGRASESTKTPQCCSSSNTHQGF*GLGLLV
Trigger: AACCAGAAGGCCAAGTCCGCAGAAGCCCTGATGTGT...GTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGTTATCTGTGACTCTTTaGTCAGGGAGTAGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: LPSAVPLPTRLDPFQPSGLSVTL*SGSSFA
Trigger: TGCAAAGCTACTCCCTGAGCAAAGAGTCACAGATAA...CCCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584601.5
CDS-3UTR GCA 90 bp AGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTGTCTCTGTGCTGCACTaGGTTTGTCCTGGCCATTCT +
Preference number: 4 (lower is better)
Translates to: RIHKDSPVLFLFQRGWTPVSVLH*VCPGHS
Trigger: AGAATGGCCAGGACAAACGCAGTGCAGCACAGAGAC...AGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584601.5
CDS-3UTR GCA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCGCACACTCACTTTTGTaGATGTCCACAACAGTACAT +
Preference number: 4 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSAHSLL*MSTTVH
Trigger: ATGTACTGTTGTGGACATGCACAAAAGTGAGTGTGC...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406381.6
CDS-3UTR CCA 90 bp TCTGTCTCGTCAATGTCCAGCAGCCGAGCCAGCCCGAAGTCTGTAATTTTGACAAGCTGGGGGTTCCGCTaGATCAAGACCCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: SVSSMSSSRASPKSVILTSWGFR*IKTPPF
Trigger: GAAAGGAGGGGTCTTGATCCAGCGGAACCCCCAGCT...TGTCAAAATTACAGACTTCGGGCTGGCTCGGCTGCTGGACATTGACGAGACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp ATGCCAGGCTCCCAAAGATCTTCTTGCAGCCAGCAAACTCCTGGATATTGGCACGTAGGTGACCAGGGCTaGGCAGTGCAGCTCACAGAT +
Preference number: 4 (lower is better)
Translates to: MPGSQRSSCSQQTPGYWHVGDQG*AVQLTD
Trigger: ATCTGTGAGCTGCACTGCCCAGCCCTGGTCACCTAC...GTGCCAATATCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAGCCTGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp CCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTCCTCGGGATTGGGCATaGACTCAAACGTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: PRVSLGRASESTKTPQCCPRDWA*TQTCLC
Trigger: ACACAGACACGTTTGAGTCCATGCCCAATCCCGAGG...ACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAAGAGTCTCAAACACTTaGAGCTGCTCTGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: HWAGPQNPQRLPSAVPLPRVSNT*SCSGWS
Trigger: GCTCCAGCCAGAGCAGCTCCAAGTGTTTGAGACTCT...TGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp AGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTAGAGTCTCAAACACTTaGAGCTGCTCTGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: RIHKDSPVLFLFQRGWTPRVSNT*SCSGWS
Trigger: GCTCCAGCCAGAGCAGCTCCAAGTGTTTGAGACTCT...AGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp AGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTGCACGAAGCAGAGGTaGGTGTTATGGTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: RIHKDSPVLFLFQRGWTPCTKQR*VLWWMR
Trigger: CCTCATCCACCATAACACCCACCTCTGCTTCGTGCA...AGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCCACACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATGTGTGGAGCAGAGCTTaGTGCGGGTTCCGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: PTLASPYNTHSPPGSLFHVWSRA*CGFRKS
Trigger: GCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACAC...ATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR CCA 90 bp CCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTACGGCAAACAGTGCCTaGCATTCACATACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PRVSLGRASESTKTPQCCTANSA*HSHTPW
Trigger: CCAGGGAGTATGTGAATGCCAGGCACTGTTTGCCGT...ACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TGGACCCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTACGGCAAACAGTGCCTaGCATTCACATACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: WTLESHWAGPQNPQRLPSTANSA*HSHTPW
Trigger: CCAGGGAGTATGTGAATGCCAGGCACTGTTTGCCGT...ACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TGGAAGGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATCTGGAAACTTCCAGATaGGCATGTAGGAGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: WKERAKLGCGIHWTLESHLETSR*ACRRGQ
Trigger: CTGACCTCTCCTACATGCCCATCTGGAAGTTTCCAG...ATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TGGACCCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTTGCGCCCTCCTCATCTaGAAACTTCCAGATGGGCAT +
Preference number: 4 (lower is better)
Translates to: WTLESHWAGPQNPQRLPSCALLI*KLPDGH
Trigger: ATGCCCATCTGGAAGTTTCCAGATGAGGAGGGCGCA...ACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp AGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTGCGCCCTCCTCATCTaGAAACTTCCAGATGGGCAT +
Preference number: 4 (lower is better)
Translates to: RIHKDSPVLFLFQRGWTPCALLI*KLPDGH
Trigger: ATGCCCATCTGGAAGTTTCCAGATGAGGAGGGCGCA...AGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCATGCGCCCTCCTCATCTaGAAACTTCCAGATGGGCAT +
Preference number: 4 (lower is better)
Translates to: HWAGPQNPQRLPSAVPLPCALLI*KLPDGH
Trigger: ATGCCCATCTGGAAGTTTCCAGATGAGGAGGGCGCA...TGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCTCTGTAATTTTGACATaGTTGGGACTCTTGACCAGC +
Preference number: 4 (lower is better)
Translates to: GSGRRALPPLDASRSQAFSVILT*LGLLTS
Trigger: GCTGGTCAAGAGTCCCAACCATGTCAAAATTACAGA...GAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GTTCTTAGACACTCCCTTAGGGCCGCTTCCCCTCTCAGGCCAGCTTCCCTAAGGCAACTCCCGGAATCTTaGCCGACATTCAGAGTCAAT +
Preference number: 4 (lower is better)
Translates to: VLRHSLRAASPLRPASLRQLPES*PTFRVN
Trigger: ATTGACTCTGAATGTCGGCCAAGATTCCGGGAGTTG...CCTTAGGGAAGCTGGCCTGAGAGGGGAAGCGGCCCTAAGGGAGTGTCTAAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp CTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCCAAGTCCTCATTCTaGATGACCACAAAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LRIHKDSPVLFLFQRGWTPKSSF*MTTKRW
Trigger: CCAGCGCTTTGTGGTCATCCAGAATGAGGACTTGGG...GGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCCACACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATTGCTGTCCAAGGGACTaGCTGGGCCCAAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PTLASPYNTHSPPGSLFHCCPRD*LGPSPH
Trigger: ATGAGGACTTGGGCCCAGCCAGTCCCTTGGACAGCA...ATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR CCA 90 bp CATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCACAGAAGAAGCCCTGCTaGGGTACCAGATACTCCTCA +
Preference number: 4 (lower is better)
Translates to: HWAGPQNPQRLPSAVPLPQKKPC*GTRYSS
Trigger: TGAGGAGTATCTGGTACCCCAGCAGGGCTTCTTCTG...TGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TTTCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGGGCTTTGCAGCCCCTTaGCTGCCCCCATTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: FQGQSLNGSLLFLDTPLGGFAAP*LPPFPG
Trigger: ACCTGGGAATGGGGGCAGCCAAGGGGCTGCAAAGCC...CCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp CACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATCTTTGGCTGGGGTCATGTGTaGGGAGGCTTTGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: HLPPHTTPILPLGLYFIFGWGHV*GGFAAP
Trigger: AGGGGCTGCAAAGCCTCCCCACACATGACCCCAGCC...AAAGATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR CCA 90 bp AGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCGGCCGAACATCTGGCTaGTTCACATATTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SLIGQGLRIHKDSPVLFLGRTSG*FTYSGW
Trigger: CCAGCCTGAATATGTGAACCAGCCAGATGTTCGGCC...GAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCACTGGGGCCGAACATCTaGCTGGTTCACATATTCAGG +
Preference number: 4 (lower is better)
Translates to: HWAGPQNPQRLPSAVPLPLGPNI*LVHIFR
Trigger: CCTGAATATGTGAACCAGCCAGATGTTCGGCCCCAG...TGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGACCCCTTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACACTGGGGCCGAACATCTaGCTGGTTCACATATTCAGG +
Preference number: 4 (lower is better)
Translates to: GPLPAIWELKQEGRFLRTLGPNI*LVHIFR
Trigger: CCTGAATATGTGAACCAGCCAGATGTTCGGCCCCAG...TGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCATTGTGCAGAATTCGTCCCCGGATTACTTGCAGGTTCTGGAAGACGCTGAGGCCTTCTGGTTCACACTaGCACGTCCAGACCCAGGTA +
Preference number: 4 (lower is better)
Translates to: PLCRIRPRITCRFWKTLRPSGSH*HVQTQV
Trigger: TACCTGGGTCTGGACGTGCCAGTGTGAACCAGAAGG...CCTCAGCGTCTTCCAGAACCTGCAAGTAATCCGGGGACGAATTCTGCACAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp TTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAGGTTCCTGGGCTTCTGCGGACTTaGCCTTCTGGTTCACACTGG +
Preference number: 4 (lower is better)
Translates to: FQPSGNSSRKEGSLGQVPGLLRT*PSGSHW
Trigger: CCAGTGTGAACCAGAAGGCCAAGTCCGCAGAAGCCC...AGGAACCTGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TCTGTCTCGTCAATGTCCAGCAGCCGAGCCAGCCCGAAGTCTGTAATTTTGACAGGGCTTCTGCGGACTTaGCCTTCTGGTTCACACTGG +
Preference number: 4 (lower is better)
Translates to: SVSSMSSSRASPKSVILTGLLRT*PSGSHW
Trigger: CCAGTGTGAACCAGAAGGCCAAGTCCGCAGAAGCCC...TGTCAAAATTACAGACTTCGGGCTGGCTCGGCTGCTGGACATTGACGAGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp TTTCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCATGGCAGGTTCCCCTaGAAGTGGTCGGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: FQGQSLNGSLLFLDTPLGHGRFP*KWSEGP
Trigger: AGGGCCCTCCGACCACTTCCAGGGGAACCTGCCATG...CCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp CCAGGCTCCCAAAGATCTTCTTGCAGCCAGCAAACTCCTGGATATTGGCACTGGCCCCTTCCAGCCATCTaGGAACTCAAGCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: PGSQRSSCSQQTPGYWHWPLPAI*ELKQEG
Trigger: TCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGG...CCAGTGCCAATATCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp TGGACCCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTACCCTAGAGTCTCATTaGGCAGGGCCTCAGAATCCA +
Preference number: 4 (lower is better)
Translates to: WTLESHWAGPQNPQRLPSTLESH*AGPQNP
Trigger: TGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGT...ACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCTCAGTACCCAGGATCTaGAAGGAAAGGGCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: SLGRASESTKTPQCCSSSSVPRI*KERAKL
Trigger: CAGCTTGGCCCTTTCCTTCCAGATCCTGGGTACTGA...GGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCATCAGTACCCAGGATCTaGAAGGAAAGGGCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: HWAGPQNPQRLPSAVPLPSVPRI*KERAKL
Trigger: CAGCTTGGCCCTTTCCTTCCAGATCCTGGGTACTGA...TGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp AGGGCCGCTTCCCCTCTCAGGCCAGCTTCCCTAAGGCTTTCAGTACCCAGGATCGGGACAGTCTCTGAATaGGTCGCTTTTGTTCTTAGA +
Preference number: 4 (lower is better)
Translates to: RAASPLRPASLRLSVPRIGTVSE*VAFVLR
Trigger: TCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCC...GATCCTGGGTACTGAAAGCCTTAGGGAAGCTGGCCTGAGAGGGGAAGCGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp GACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGGACAGTCTCTGAATaGGTCGCTTTTGTTCTTAGA +
Preference number: 4 (lower is better)
Translates to: DSPVLFLFQRGWTPSSHLGTVSE*VAFVLR
Trigger: TCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCC...CAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp TCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCGCTGTTCCTTCCTCATaGGGGGCAGTACTAGGTTTC +
Preference number: 4 (lower is better)
Translates to: SLGRASESTKTPQCCSSSAVPSS*GAVLGF
Trigger: GAAACCTAGTACTGCCCCCCATGAGGAAGGAACAGC...GGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp TGGACCCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTTCCTCATaGGGGGCAGTACTAGGTTTC +
Preference number: 4 (lower is better)
Translates to: WTLESHWAGPQNPQRLPSAVPSS*GAVLGF
Trigger: GAAACCTAGTACTGCCCCCCATGAGGAAGGAACAGC...ACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp TTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAGGTTCCTGCACTGCGTTTGTCCTaGCCATTCTACTGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: FQPSGNSSRKEGSLGQVPALRLS*PFYWCP
Trigger: GGGGCACCAGTAGAATGGCCAGGACAAACGCAGTGC...AGGAACCTGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584601.5
CDS-3UTR CCA 90 bp TGGAAGGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATATCACCCTCGGGAGGTaGTACTTCAATTGCGACTCA +
Preference number: 4 (lower is better)
Translates to: WKERAKLGCGIHWTLESHITLGR*YFNCDS
Trigger: TGAGTCGCAATTGAAGTACCACCTCCCGAGGGTGAT...ATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584601.5
CDS-3UTR CCA 90 bp CCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCACCATTCATTAAGTaGAAGTGGATCATCACAAAG +
Preference number: 4 (lower is better)
Translates to: PLEVVGGPSHLLMPAEVRPPFIK*KWIITK
Trigger: CTTTGTGATGATCCACTTCCACTTAATGAATGGTGG...CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584601.5
CDS-3UTR TCA 90 bp GGACCCCTTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACACTTTCAAGATCTCTGTaGGGCTTCGAAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GPLPAIWELKQEGRFLRTLSRSL*GFEAAA
Trigger: AGCTGCAGCTTCGAAGCCTCACAGAGATCTTGAAAG...TGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp AGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCCTTTCAAGATCTCTGTaGGGCTTCGAAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SLIGQGLRIHKDSPVLFLLSRSL*GFEAAA
Trigger: AGCTGCAGCTTCGAAGCCTCACAGAGATCTTGAAAG...GAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp TCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCTGGTGTCTATCAGTGTaGGAGCCAGCTGGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: SLGRASESTKTPQCCSSSWCLSV*EPAGCS
Trigger: AGAACAACCAGCTGGCTCTCACACTGATAGACACCA...GGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCGAGCCATTCTGGGGCTaGCACTCAGGGTGGCACGGC +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPEPFWG*HSGWHG
Trigger: GCCGTGCCACCCTGAGTGTCAGCCCCAGAATGGCTC...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR TCA 90 bp TTTCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGAGGAGTGGGTGCAGTTaGTGGGGCAAGGCTGGCATG +
Preference number: 4 (lower is better)
Translates to: FQGQSLNGSLLFLDTPLGRSGCS*WGKAGM
Trigger: CATGCCAGCCTTGCCCCATCAACTGCACCCACTCCT...CCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR TCA 90 bp TTTCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCAACCACCGCAGAGATaGTGGACGTCAGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: FQGQSLNGSLLFLDTPLGQPPQR*WTSEGW
Trigger: CCAGCCCTCTGACGTCCATCATCTCTGCGGTGGTTG...CCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR TCA 90 bp CATGCCCAGACCATAGCACACTCGGGCACAGGGCTTGCTGCACTTCTCACACCGTTTCCCTCAACACTTTaGTGGCCACTGGAATTTTCA +
Preference number: 4 (lower is better)
Translates to: HAQTIAHSGTGLAALLTPFPSTL*WPLEFS
Trigger: TGAAAATTCCAGTGGCCATCAAAGTGTTGAGGGAAA...CGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGTGTGCTATGGTCTGGGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR TCA 90 bp GTACTCTGGGTTCTCTGCCGTAGGTGTCCCTTTGAAGGTGCTGGGTGGAGCCCCTTTCCCTCAACACTTTaGTGGCCACTGGAATTTTCA +
Preference number: 4 (lower is better)
Translates to: VLWVLCRRCPFEGAGWSPFPSTL*WPLEFS
Trigger: TGAAAATTCCAGTGGCCATCAAAGTGTTGAGGGAAA...GGGGCTCCACCCAGCACCTTCAAAGGGACACCTACGGCAGAGAACCCAGAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR TCA 90 bp TGGACCCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTAGGCAAAAACGTCTTTaGCGACCCCATTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: WTLESHWAGPQNPQRLPSRQKRL*RPHSSL
Trigger: CAGGGAAGAATGGGGTCGTCAAAGACGTTTTTGCCT...ACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp CACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATCTTTGCCTTCCCTGCTCCCTaGGGACACATCAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: HLPPHTTPILPLGLYFIFAFPAP*GHIRAS
Trigger: AGAAGCCCTGATGTGTCCTCAGGGAGCAGGGAAGGC...AAAGATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR TCA 90 bp TGGAAGGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATACAAAGCCTGGATACTaGCACCATTGCTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: WKERAKLGCGIHWTLESHTKPGY*HHCCSF
Trigger: GAAGGAACAGCAATGGTGTCAGTATCCAGGCTTTGT...ATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp AAAACTAAACAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGCCGCCAGCTCCATGGTaGTCACTGCGGCTCCGGCCC +
Preference number: 4 (lower is better)
Translates to: KTKQKSTLYKAWILTPLLPPAPW*SLRLRP
Trigger: GGGCCGGAGCCGCAGTGAGCACCATGGAGCTGGCGG...CAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTGTTTAGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269571.10
ENST00000578373.5
CDS-3UTR GCA 90 bp TTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAGGTTCCTACCTCCTGGATATCCTaGAGGAAGGACAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: FQPSGNSSRKEGSLGQVPTSWIS*RKDRLA
Trigger: TGCCAGCCTGTCCTTCCTGCAGGATATCCAGGAGGT...AGGAACCTGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTCTGTGTTCCATCCTCTaGTGTCACCTCTTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: PRVSLGRASESTKTPQCCLCSIL*CHLLVV
Trigger: CACAACCAAGAGGTGACAGCAGAGGATGGAACACAG...ACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp TGGAAGGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTCCCAAAGATCTTCTTaGAGCCAGCAAACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: WKERAKLGCGIHWTLESHSQRSS*SQQTPG
Trigger: TCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGA...ATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp AAAACTAAACAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGCCTGGACCCCAGCAGTaGCCTCGGGCGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: KTKQKSTLYKAWILTPLLPGPQQ*PRAHSW
Trigger: CCAGCTGTGCGCCCGAGGGCACTGCTGGGGTCCAGG...CAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTGTTTAGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp AAGATCTTCTTGCAGCCAGCAAACTCCTGGATATTGGCACTGGTAACTGCCCTCACCAGCTCCGTTTCCTaGAGCAGTCTCCGCATCGTG +
Preference number: 4 (lower is better)
Translates to: KIFLQPANSWILALVTALTSSVS*SSLRIV
Trigger: CACGATGCGGAGACTGCTGCAGGAAACGGAGCTGGT...GAGGGCAGTTACCAGTGCCAATATCCAGGAGTTTGCTGGCTGCAAGAAGATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR GCA 90 bp GGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTTGGATGTCAGGCAGATaGCCAGAAGGCGGGAGACAT +
Preference number: 4 (lower is better)
Translates to: GQSLNGSLLFLDTPLGPLWMSGR*PEGGRH
Trigger: ATGTCTCCCGCCTTCTGGGCATCTGCCTGACATCCA...AAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp AGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTATCCCCTTGGCAATCTaGATACACCAGTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RIHKDSPVLFLFQRGWTPIPLAI*IHQFSR
Trigger: CCTGCTGAACTGGTGTATGCAGATTGCCAAGGGGAT...AGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp TTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAGGTTCCTGGACAGAAGAAGCCCTaGTGGGGTACCAGATACTCC +
Preference number: 4 (lower is better)
Translates to: FQPSGNSSRKEGSLGQVPGQKKP*WGTRYS
Trigger: GGAGTATCTGGTACCCCAGCAGGGCTTCTTCTGTCC...AGGAACCTGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp AGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTGTACTCTGGGTTCTCTaGCGTAGGTGTCCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: RIHKDSPVLFLFQRGWTPVLWVL*RRCPFE
Trigger: TTCAAAGGGACACCTACGGCAGAGAACCCAGAGTAC...AGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCTTATCTGTGACTCTTTaGTCAGGGAGTAGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: GKGQAGLWHPLDPRVSLGLSVTL*SGSSFA
Trigger: TGCAAAGCTACTCCCTGAGCAAAGAGTCACAGATAA...GCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584601.5
CDS-3UTR GCA 90 bp AGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTGGCCATTCTACTGGTaGCCCCGTTTTATCTGTGAC +
Preference number: 4 (lower is better)
Translates to: RIHKDSPVLFLFQRGWTPWPFYW*PRFICD
Trigger: GTCACAGATAAAACGGGGGCACCAGTAGAATGGCCA...AGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584601.5
CDS-3UTR GCA 90 bp TCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCTCTGAGTCTCTGTGCTaGACTGCGTTTGTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SGTVSEWVAFVLRHSLRASESLC*TAFVLA
Trigger: GGCCAGGACAAACGCAGTGCAGCACAGAGACTCAGA...GGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406381.6
CDS-3UTR CCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCGGTGGGTCTCGGGACTaGCAGGGAGCCGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPGGSRD*QGAAAS
Trigger: TGAAGCTGCGGCTCCCTGCCAGTCCCGAGACCCACC...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp GAAACTTCCAGATGGGCATGTAGGAGAGGTCAGGTTTCACACCGCTGGGGCAGCAGTGTGAGAGCCAGCTaGTTGTTCTTGTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: ETSRWACRRGQVSHRWGSSVRAS*LFLWKM
Trigger: CATCTTCCACAAGAACAACCAGCTGGCTCTCACACT...GCTGCCCCAGCGGTGTGAAACCTGACCTCTCCTACATGCCCATCTGGAAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCGCAGTCAGTGGGCAGTaGCCCCTTGCAGCGGGCACA +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPAVSGQ*PLAAGT
Trigger: TGTGCCCGCTGCAAGGGGCCACTGCCCACTGACTGC...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp ATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACCTCGGGATTGGGCATaGACTCAAACGTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: IGQGLRIHKDSPVLFLFQPRDWA*TQTCLC
Trigger: ACACAGACACGTTTGAGTCCATGCCCAATCCCGAGG...TTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp AGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTATTACTTGCAGGTTCTaGAAGACGCTGAGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: RIHKDSPVLFLFQRGWTPITCRF*KTLRSG
Trigger: GCCTGACCTCAGCGTCTTCCAGAACCTGCAAGTAAT...AGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCCAGAGGTGGGTGTTATaGTGGATGAGGGCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: SGTVSEWVAFVLRHSLRAQRWVL*WMRASP
Trigger: TGGACTGGCCCTCATCCACCATAACACCCACCTCTG...GGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGCCTCGGGCGCACAGCTaGTGGCAGGCCAGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKPRAHS*WQARPS
Trigger: CGAGGGCCTGGCCTGCCACCAGCTGTGCGCCCGAGG...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp CAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGTTCCTTCCTTCCTCCACGCACTCCTaGCCCCGAAGGAACTGGCTG +
Preference number: 4 (lower is better)
Translates to: QKSTLYKAWILTPLLFLPSSTHS*PRRNWL
Trigger: CAGCCAGTTCCTTCGGGGCCAGGAGTGCGTGGAGGA...AGGAAGGAACAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCCAGGTTTCACACCGCTaGGGCAGCGGGCCACGCAGA +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPQVSHR*GSGPRR
Trigger: TCTGCGTGGCCCGCTGCCCCAGCGGTGTGAAACCTG...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp CATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCACTGGAAACTTCCAGATaGGCATGTAGGAGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: HWAGPQNPQRLPSAVPLPLETSR*ACRRGQ
Trigger: CTGACCTCTCCTACATGCCCATCTGGAAGTTTCCAG...TGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCGGTAGCTCATCCCCTTaGCAATCTGCATACACCAGT +
Preference number: 4 (lower is better)
Translates to: LRIHKDSPVLFLFQRGWTGSSSP*QSAYTS
Trigger: ACTGGTGTATGCAGATTGCCAAGGGGATGAGCTACC...GGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp AGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCGGTAGCTCATCCCCTTaGCAATCTGCATACACCAGT +
Preference number: 4 (lower is better)
Translates to: SLIGQGLRIHKDSPVLFLGSSSP*QSAYTS
Trigger: ACTGGTGTATGCAGATTGCCAAGGGGATGAGCTACC...GAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGGTAGCTCATCCCCTTaGCAATCTGCATACACCAGT +
Preference number: 4 (lower is better)
Translates to: LGRASESTKTPQCCSSSNGSSSP*QSAYTS
Trigger: ACTGGTGTATGCAGATTGCCAAGGGGATGAGCTACC...GTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp ACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGTCTGTAATTTTGACATaGTTGGGACTCTTGACCAGC +
Preference number: 4 (lower is better)
Translates to: TPQCCSSSNEAGPLPAIWSVILT*LGLLTS
Trigger: GCTGGTCAAGAGTCCCAACCATGTCAAAATTACAGA...CCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCAGGGATCTCCCGGGCTaGGATCCCATCGTAAGGTTT +
Preference number: 4 (lower is better)
Translates to: SGTVSEWVAFVLRHSLRARDLPG*DPIVRF
Trigger: AAACCTTACGATGGGATCCCAGCCCGGGAGATCCCT...GGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp TTTGACGACCCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCCAACTCCCGGAATCTTaGCCGACATTCAGAGTCAAT +
Preference number: 4 (lower is better)
Translates to: FDDPILPWGESLGPFQSGQLPES*PTFRVN
Trigger: ATTGACTCTGAATGTCGGCCAAGATTCCGGGAGTTG...GCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGGGTCGTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp CTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTCCCCTCTCACCCAAGTCCTCATTCTaGATGACCACAAAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LNGSLLFLDTPLGPLPLSPKSSF*MTTKRW
Trigger: CCAGCGCTTTGTGGTCATCCAGAATGAGGACTTGGG...TGAGAGGGGAAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp CTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTCCCCTCTCACAGAAGAAGCCCTGCTaGGGTACCAGATACTCCTCA +
Preference number: 4 (lower is better)
Translates to: LNGSLLFLDTPLGPLPLSQKKPC*GTRYSS
Trigger: TGAGGAGTATCTGGTACCCCAGCAGGGCTTCTTCTG...TGAGAGGGGAAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp CCATTGTGCAGAATTCGTCCCCGGATTACTTGCAGGTTCTGGAAGACGCTGAGGCTGGGGCCGAACATCTaGCTGGTTCACATATTCAGG +
Preference number: 4 (lower is better)
Translates to: PLCRIRPRITCRFWKTLRLGPNI*LVHIFR
Trigger: CCTGAATATGTGAACCAGCCAGATGTTCGGCCCCAG...CCTCAGCGTCTTCCAGAACCTGCAAGTAATCCGGGGACGAATTCTGCACAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp ATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACTGGGGCCGAACATCTaGCTGGTTCACATATTCAGG +
Preference number: 4 (lower is better)
Translates to: IGQGLRIHKDSPVLFLFQLGPNI*LVHIFR
Trigger: CCTGAATATGTGAACCAGCCAGATGTTCGGCCCCAG...TTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCCCTTCTGGTTCACACTaGCACGTCCAGACCCAGGTA +
Preference number: 4 (lower is better)
Translates to: SGTVSEWVAFVLRHSLRAPSGSH*HVQTQV
Trigger: TACCTGGGTCTGGACGTGCCAGTGTGAACCAGAAGG...GGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp TTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAGGTTCCTCCCCTTCCAGCCATCTaGGAACTCAAGCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: FQPSGNSSRKEGSLGQVPPLPAI*ELKQEG
Trigger: TCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGG...AGGAACCTGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TTTCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGGGCCAAGCTGGGCTGTaGCATCCACTGGACCCTAGA +
Preference number: 4 (lower is better)
Translates to: FQGQSLNGSLLFLDTPLGGQAGL*HPLDPR
Trigger: TCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCC...CCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
3UTR CAA 72 bp ACTAGGTTTCAGGGACAGTCTCTGAATGGGTCGCTTTaGTTCTTAGACACTCCCTTAGGGCCGCTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: TRFQGQSLNGSL*FLDTPLGPLPL
Trigger: GAGGGGAAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGAAACCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR TCA 90 bp GAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCATGTATAGGTAACCTGTaGTCTCTTCCAGAGTCTCAA +
Preference number: 4 (lower is better)
Translates to: ERAKLGCGIHWTLESHWACIGNL*SLPESQ
Trigger: TTGAGACTCTGGAAGAGATCACAGGTTACCTATACA...TGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCGGAACTGGCTGCAGTTaGCACACTGGGTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPGTGCS*HTGWAL
Trigger: CAGGGCCCACCCAGTGTGTCAACTGCAGCCAGTTCC...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR TCA 90 bp CCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGTTTCCCTCAACACTTTaGTGGCCACTGGAATTTTCA +
Preference number: 4 (lower is better)
Translates to: PQRLPSAVPLPTRLDPFQFPSTL*WPLEFS
Trigger: TGAAAATTCCAGTGGCCATCAAAGTGTTGAGGGAAA...CTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp CACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATCTTTATCGTCCTCCAGCAGTaGGCGGTAGAAGGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: HLPPHTTPILPLGLYFIFIVLQQ*AVEGAV
Trigger: GACAGCACCTTCTACCGCTCACTGCTGGAGGACGAT...AAAGATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR TCA 90 bp ATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAAAGGCAAAAACGTCTTTaGCGACCCCATTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: IGQGLRIHKDSPVLFLFQRQKRL*RPHSSL
Trigger: CAGGGAAGAATGGGGTCGTCAAAGACGTTTTTGCCT...TTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR TCA 90 bp CATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACAAAGCCTGGATACTaGCACCATTGCTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: HWAGPQNPQRLPSAVPLPTKPGY*HHCCSF
Trigger: GAAGGAACAGCAATGGTGTCAGTATCCAGGCTTTGT...TGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR TCA 90 bp GGACCCCTTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAACAAAGCCTGGATACTaGCACCATTGCTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: GPLPAIWELKQEGRFLRTTKPGY*HHCCSF
Trigger: GAAGGAACAGCAATGGTGTCAGTATCCAGGCTTTGT...TGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCGTGAGGCTTCGAAGCTaGAGCTCCCGCAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPVRLRS*SSRRPP
Trigger: AGGAGGCCTGCGGGAGCTGCAGCTTCGAAGCCTCAC...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp TTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACTCCCAAAGATCTTCTTaGAGCCAGCAAACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LGRASESTKTPQCCSSSNSQRSS*SQQTPG
Trigger: TCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGA...GTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GGACCCCTTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACATCCCAAAGATCTTCTTaGAGCCAGCAAACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GPLPAIWELKQEGRFLRTSQRSS*SQQTPG
Trigger: TCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGA...TGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp GCTCCCAAAGATCTTCTTGCAGCCAGCAAACTCCTGGATATTGGCACTGGTAACCGTCCCCGGATTACTTaGAGGTTCTGGAAGACGCTG +
Preference number: 4 (lower is better)
Translates to: APKDLLAASKLLDIGTGNRPRIT*RFWKTL
Trigger: CAGCGTCTTCCAGAACCTGCAAGTAATCCGGGGACG...GTTACCAGTGCCAATATCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR GCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCTCCCTGGGGAGCCCCTaGAGTACTCGGCATTCCTCC +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPSLGSP*STRHSS
Trigger: GGAGGAATGCCGAGTACTGCAGGGGCTCCCCAGGGA...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp GGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTTGGCACGGCAAACAGTaGCTGGCATTCACATACTCC +
Preference number: 4 (lower is better)
Translates to: GQSLNGSLLFLDTPLGPLWHGKQ*LAFTYS
Trigger: GGAGTATGTGAATGCCAGGCACTGTTTGCCGTGCCA...AAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp GGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTTTCCGGATCTTCTGCTaGCGTCGCTTGATGAGGATC +
Preference number: 4 (lower is better)
Translates to: GQSLNGSLLFLDTPLGPLFRIFC*RRLMRI
Trigger: GATCCTCATCAAGCGACGGCAGCAGAAGATCCGGAA...AAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp CACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATCTTTACCAGCTCCGTTTCCTaGAGCAGTCTCCGCATCGTG +
Preference number: 4 (lower is better)
Translates to: HLPPHTTPILPLGLYFIFTSSVS*SSLRIV
Trigger: CACGATGCGGAGACTGCTGCAGGAAACGGAGCTGGT...AAAGATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR GCA 90 bp TTTCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGTTCAGGATCCGCATCTaGGCCTGGTTGGGCATCGCT +
Preference number: 4 (lower is better)
Translates to: FQGQSLNGSLLFLDTPLGFRIRI*AWLGIA
Trigger: AGCGATGCCCAACCAGGCGCAGATGCGGATCCTGAA...CCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp TTTCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGAGCTGTGTCACCAGCTaGACCGTGGATGTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: FQGQSLNGSLLFLDTPLGSCVTS*TVDVRQ
Trigger: CTGCCTGACATCCACGGTGCAGCTGGTGACACAGCT...CCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp ATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAATGGCCATTCTACTGGTaGCCCCGTTTTATCTGTGAC +
Preference number: 4 (lower is better)
Translates to: IGQGLRIHKDSPVLFLFQWPFYW*PRFICD
Trigger: GTCACAGATAAAACGGGGGCACCAGTAGAATGGCCA...TTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584601.5
CDS-3UTR GCA 90 bp CAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGTTCCTTCCTACTCTCATCACTGCCTaGGCAGGCATGGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: QKSTLYKAWILTPLLFLPTLITA*AGMAAR
Trigger: CCTGGCAGCCATGCCTGCGCAGGCAGTGATGAGAGT...AGGAAGGAACAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406381.6
CDS-3UTR CCA 90 bp CTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCAGTGTGAGAGCCAGCTaGTTGTTCTTGTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: LRIHKDSPVLFLFQRGWTSVRAS*LFLWKM
Trigger: CATCTTCCACAAGAACAACCAGCTGGCTCTCACACT...GGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCCAGCCAGCAAACTCCTaGATATTGGCACTGGTAACT +
Preference number: 4 (lower is better)
Translates to: SLGRASESTKTPQCCSSSQPANS*ILALVT
Trigger: AGTTACCAGTGCCAATATCCAGGAGTTTGCTGGCTG...GGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCAGAGTCTCAAACACTTaGAGCTGCTCTGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SGTVSEWVAFVLRHSLRARVSNT*SCSGWS
Trigger: GCTCCAGCCAGAGCAGCTCCAAGTGTTTGAGACTCT...GGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp ATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAAATTACTTGCAGGTTCTaGAAGACGCTGAGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: IGQGLRIHKDSPVLFLFQITCRF*KTLRSG
Trigger: GCCTGACCTCAGCGTCTTCCAGAACCTGCAAGTAAT...TTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAGGTTCCTTGCACGAAGCAGAGGTaGGTGTTATGGTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: FQPSGNSSRKEGSLGQVPCTKQR*VLWWMR
Trigger: CCTCATCCACCATAACACCCACCTCTGCTTCGTGCA...AGGAACCTGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCTCCTCCACGCACTCCTaGCCCCGAAGGAACTGGCTG +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPSSTHS*PRRNWL
Trigger: CAGCCAGTTCCTTCGGGGCCAGGAGTGCGTGGAGGA...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp CCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGTCTGTAATTTTGACATaGTTGGGACTCTTGACCAGC +
Preference number: 4 (lower is better)
Translates to: PQRLPSAVPLPTRLDPFQSVILT*LGLLTS
Trigger: GCTGGTCAAGAGTCCCAACCATGTCAAAATTACAGA...CTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CCAGGCTCCCAAAGATCTTCTTGCAGCCAGCAAACTCCTGGATATTGGCACTGGTTGCCCCCATCTGCATaGTACTCTGTCTCGTCAATG +
Preference number: 4 (lower is better)
Translates to: PGSQRSSCSQQTPGYWHWLPPSA*YSVSSM
Trigger: CATTGACGAGACAGAGTACCATGCAGATGGGGGCAA...CCAGTGCCAATATCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAGCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp CTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCAACTCCCGGAATCTTaGCCGACATTCAGAGTCAAT +
Preference number: 4 (lower is better)
Translates to: LRIHKDSPVLFLFQRGWTQLPES*PTFRVN
Trigger: ATTGACTCTGAATGTCGGCCAAGATTCCGGGAGTTG...GGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp GGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTCAGAAGAAGCCCTGCTaGGGTACCAGATACTCCTCA +
Preference number: 4 (lower is better)
Translates to: GQSLNGSLLFLDTPLGPLQKKPC*GTRYSS
Trigger: TGAGGAGTATCTGGTACCCCAGCAGGGCTTCTTCTG...AAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp AAACTCCTGGATATTGGCACTGGTAACTGCCCTCACCTCTCGCAAGTGCTCCATGGCCGAACATCTGGCTaGTTCACATATTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: KLLDIGTGNCPHLSQVLHGRTSG*FTYSGW
Trigger: CCAGCCTGAATATGTGAACCAGCCAGATGTTCGGCC...ATGGAGCACTTGCGAGAGGTGAGGGCAGTTACCAGTGCCAATATCCAGGAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp CCCACACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATACCCTAGAGTCTCATTaGGCAGGGCCTCAGAATCCA +
Preference number: 4 (lower is better)
Translates to: PTLASPYNTHSPPGSLFHTLESH*AGPQNP
Trigger: TGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGT...ATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR CCA 90 bp CCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGAAATATATTTGCAAATaGACAAAGTGGGTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: PLEVVGGPSHLLMPAEVRKYICK*TKWVWR
Trigger: TCTCCACACCCACTTTGTCCATTTGCAAATATATTT...CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR CCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCCTGCCTGCGCAGGCATaGCTGCCAGGGTCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPLPAQA*LPGSES
Trigger: AGACTCAGACCCTGGCAGCCATGCCTGCGCAGGCAG...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp AGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTCGGTTACTCCGGAAGTaGAAGCTTCATACTCCTAAG +
Preference number: 4 (lower is better)
Translates to: RIHKDSPVLFLFQRGWTPRLLRK*KLHTPK
Trigger: CTTAGGAGTATGAAGCTTCCACTTCCGGAGTAACCG...AGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584601.5
CDS-3UTR TCA 90 bp TTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAGGTTCCTTGGTGTCTATCAGTGTaGGAGCCAGCTGGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: FQPSGNSSRKEGSLGQVPWCLSV*EPAGCS
Trigger: AGAACAACCAGCTGGCTCTCACACTGATAGACACCA...AGGAACCTGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATCTTTACCTCCTGGATATCCTaGAGGAAGGACAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: HLPPHTTPILPLGLYFIFTSWIS*RKDRLA
Trigger: TGCCAGCCTGTCCTTCCTGCAGGATATCCAGGAGGT...AAAGATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR GCA 90 bp CAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGTTCCTTCCTACAATCCGCAGCCTCTaGAGTGGGACCTGCCTCACT +
Preference number: 4 (lower is better)
Translates to: QKSTLYKAWILTPLLFLPTIRSL*SGTCLT
Trigger: AGTGAGGCAGGTCCCACTGCAGAGGCTGCGGATTGT...AGGAAGGAACAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp CAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGTTCCTTCCTCACCGGCACAGACAGTaGGCGTCAGGCTCTGACAAT +
Preference number: 4 (lower is better)
Translates to: QKSTLYKAWILTPLLFLPHRHRQ*ASGSDN
Trigger: ATTGTCAGAGCCTGACGCGCACTGTCTGTGCCGGTG...AGGAAGGAACAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCCTCGGGCACAGGGCTTaGTGCACTTCTCACACCGCT +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPLGHRA*CTSHTA
Trigger: AGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAG...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp CCCACACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATGTACTCTGGGTTCTCTaGCGTAGGTGTCCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: PTLASPYNTHSPPGSLFHVLWVL*RRCPFE
Trigger: TTCAAAGGGACACCTACGGCAGAGAACCCAGAGTAC...ATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR GCA 90 bp TTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAGGTTCCTGTACTCTGGGTTCTCTaGCGTAGGTGTCCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: FQPSGNSSRKEGSLGQVPVLWVL*RRCPFE
Trigger: TTCAAAGGGACACCTACGGCAGAGAACCCAGAGTAC...AGGAACCTGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp TTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAGGTTCCTACAAAGACTCCCCAGTaGTGTTCCTCTTCCAACGAG +
Preference number: 4 (lower is better)
Translates to: FQPSGNSSRKEGSLGQVPTKTPQ*CSSSNE
Trigger: CTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGT...AGGAACCTGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR GCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCCTGCGCAGGCATGGCTaGCAGGGTCTGAGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPLRRHG*QGLSLC
Trigger: ACAGAGACTCAGACCCTGGCAGCCATGCCTGCGCAG...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCACTCTCATCACTGCCTaGGCAGGCATGGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPTLITA*AGMAAR
Trigger: CCTGGCAGCCATGCCTGCGCAGGCAGTGATGAGAGT...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp GGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTGCAGCTTCATGTCTGTaGCGGTGCACACTCACTTTT +
Preference number: 4 (lower is better)
Translates to: GQSLNGSLLFLDTPLGPLAASCL*RCTLTF
Trigger: AAAAGTGAGTGTGCACCGGCACAGACATGAAGCTGC...AAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406381.6
CDS-3UTR CCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCGCAGGAAGGACAGGCTaGCATTGGTGGGCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPAGRTG*HWWAGR
Trigger: CCTACCTGCCCACCAATGCCAGCCTGTCCTTCCTGC...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp TTTGACGACCCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCAGCTGGTTGTTCTTGTaGAAGATGTCCTTCCACAAA +
Preference number: 4 (lower is better)
Translates to: FDDPILPWGESLGPFQSGSWLFL*KMSFHK
Trigger: TTTGTGGAAGGACATCTTCCACAAGAACAACCAGCT...GCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGGGTCGTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CCA 90 bp ATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAAAGTGTGAGAGCCAGCTaGTTGTTCTTGTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: IGQGLRIHKDSPVLFLFQSVRAS*LFLWKM
Trigger: CATCTTCCACAAGAACAACCAGCTGGCTCTCACACT...TTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGGGCAGTCAGAGTGCTTaGGGCCCGTGCAGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKGSQSA*GPCSRQ
Trigger: CTGCCGGCTGCACGGGCCCCAAGCACTCTGACTGCC...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp AATGCCAGGCTCCCAAAGATCTTCTTGCAGCCAGCAAACTCCTGGATATTGGCATGCACGAAGCAGAGGTaGGTGTTATGGTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: NARLPKIFLQPANSWILACTKQR*VLWWMR
Trigger: CCTCATCCACCATAACACCCACCTCTGCTTCGTGCA...TGCCAATATCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAGCCTGGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCCGTCCTCTGGCCGGTTaGCAGTGTGGAGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPRPLAG*QCGAEL
Trigger: AAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACG...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCCACACACTCGTCCTCTaGCCGGTTGGCAGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPHTLVL*PVGSVE
Trigger: CTCCACACTGCCAACCGGCCAGAGGACGAGTGTGTG...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp AAAACTAAACAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGCAGGTTTCACACCGCTaGGGCAGCGGGCCACGCAGA +
Preference number: 4 (lower is better)
Translates to: KTKQKSTLYKAWILTPLLQVSHR*GSGPRR
Trigger: TCTGCGTGGCCCGCTGCCCCAGCGGTGTGAAACCTG...CAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTGTTTAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp CTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCACTTTGATGGCCACTaGAATTTTCACATTCTCCCC +
Preference number: 4 (lower is better)
Translates to: LRIHKDSPVLFLFQRGWTHFDGH*NFHILP
Trigger: GGGGAGAATGTGAAAATTCCAGTGGCCATCAAAGTG...GGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TGGACCCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTCACTTTGATGGCCACTaGAATTTTCACATTCTCCCC +
Preference number: 4 (lower is better)
Translates to: WTLESHWAGPQNPQRLPSHFDGH*NFHILP
Trigger: GGGGAGAATGTGAAAATTCCAGTGGCCATCAAAGTG...ACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TGGATATTGGCACTGGTAACTGCCCTCACCTCTCGCAAGTGCTCCATGCCCAGAGGGACAGTCTCTGAATaGGTCGCTTTTGTTCTTAGA +
Preference number: 4 (lower is better)
Translates to: WILALVTALTSRKCSMPRGTVSE*VAFVLR
Trigger: TCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCC...TCTGGGCATGGAGCACTTGCGAGAGGTGAGGGCAGTTACCAGTGCCAATATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp AAGATCTTCTTGCAGCCAGCAAACTCCTGGATATTGGCACTGGTAACTGCCCTCGCTGTTCCTTCCTCATaGGGGGCAGTACTAGGTTTC +
Preference number: 4 (lower is better)
Translates to: KIFLQPANSWILALVTALAVPSS*GAVLGF
Trigger: GAAACCTAGTACTGCCCCCCATGAGGAAGGAACAGC...GAGGGCAGTTACCAGTGCCAATATCCAGGAGTTTGCTGGCTGCAAGAAGATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp TTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACACTCTGTACAAAGCCTaGATACTGACACCATTGCTG +
Preference number: 4 (lower is better)
Translates to: LGRASESTKTPQCCSSSNTLYKA*ILTPLL
Trigger: CAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGT...GTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp GGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTTCCTGGCCATTCTACTaGTGCCCCCGTTTTATCTGT +
Preference number: 4 (lower is better)
Translates to: GQSLNGSLLFLDTPLGPLSWPFY*CPRFIC
Trigger: ACAGATAAAACGGGGGCACCAGTAGAATGGCCAGGA...AAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000406381.6
CDS-3UTR TCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCTGGTGGGCAGGTAGGTaGGTTCCAGGTTTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPWWAGR*VPGFPA
Trigger: TGCAGGGAAACCTGGAACTCACCTACCTGCCCACCA...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR TCA 90 bp TCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCTTCAGGGACAGTCTCTaGATGGGTCGCTTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: SGTVSEWVAFVLRHSLRAFRDSL*MGRFCS
Trigger: AGAACAAAAGCGACCCATTCAGAGACTGTCCCTGAA...GGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR TCA 90 bp GAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCAATCTTCTGGAATCTTTaGAGTATCTCACTTTTGTGC +
Preference number: 4 (lower is better)
Translates to: ERAKLGCGIHWTLESHWAIFWNL*SISLLC
Trigger: GCACAAAAGTGAGATACTTCAAAGATTCCAGAAGAT...TGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584601.5
CDS-3UTR GCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCACAATCCGCAGCCTCTaGAGTGGGACCTGCCTCACT +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPTIRSL*SGTCLT
Trigger: AGTGAGGCAGGTCCCACTGCAGAGGCTGCGGATTGT...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGTGCTTGGGGCCCGTaGAGCCGGCAGCACACTGCT +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKSAWGP*SRQHTA
Trigger: AGCAGTGTGCTGCCGGCTGCACGGGCCCCAAGCACT...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp TTTCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGATTGGCACTGGTAACTaGCCTCACCTCTCGCAAGTG +
Preference number: 4 (lower is better)
Translates to: FQGQSLNGSLLFLDTPLGIGTGN*PHLSQV
Trigger: CACTTGCGAGAGGTGAGGGCAGTTACCAGTGCCAAT...CCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp AAACTCCTGGATATTGGCACTGGTAACTGCCCTCACCTCTCGCAAGTGCTCCATTCCCAAAGATCTTCTTaGAGCCAGCAAACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: KLLDIGTGNCPHLSQVLHSQRSS*SQQTPG
Trigger: TCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGA...ATGGAGCACTTGCGAGAGGTGAGGGCAGTTACCAGTGCCAATATCCAGGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR GCA 90 bp AAGATCTTCTTGCAGCCAGCAAACTCCTGGATATTGGCACTGGTAACTGCCCTCGTACTCTGGGTTCTCTaGCGTAGGTGTCCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: KIFLQPANSWILALVTALVLWVL*RRCPFE
Trigger: TTCAAAGGGACACCTACGGCAGAGAACCCAGAGTAC...GAGGGCAGTTACCAGTGCCAATATCCAGGAGTTTGCTGGCTGCAAGAAGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR GCA 90 bp GGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTTCATGTCTGTGCCGGTaGACACTCACTTTTGTGCAT +
Preference number: 4 (lower is better)
Translates to: GQSLNGSLLFLDTPLGPLSCLCR*TLTFVH
Trigger: ATGCACAAAAGTGAGTGTGCACCGGCACAGACATGA...AAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406381.6
CDS-3UTR CCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCAGCTGGGGGTTCCGCTaGATCAAGACCCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPSWGFR*IKTPPF
Trigger: GAAAGGAGGGGTCTTGATCCAGCGGAACCCCCAGCT...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp CCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTAGCTGGTTGTTCTTGTaGAAGATGTCCTTCCACAAA +
Preference number: 4 (lower is better)
Translates to: PRVSLGRASESTKTPQCCSWLFL*KMSFHK
Trigger: TTTGTGGAAGGACATCTTCCACAAGAACAACCAGCT...ACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACAGCTGGTTGTTCTTGTaGAAGATGTCCTTCCACAAA +
Preference number: 4 (lower is better)
Translates to: LGRASESTKTPQCCSSSNSWLFL*KMSFHK
Trigger: TTTGTGGAAGGACATCTTCCACAAGAACAACCAGCT...GTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCACCGGCCCTCGGGATTaGGCATGGACTCAAACGTGT +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPTGPRD*AWTQTC
Trigger: ACACGTTTGAGTCCATGCCCAATCCCGAGGGCCGGT...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCAGGCAGTCACACAGCTaGCGCCGAATGTATACCGGC +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPRQSHS*RRMYTG
Trigger: GCCGGTATACATTCGGCGCCAGCTGTGTGACTGCCT...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp ACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTCCCAGCCAGCAAACTCCTaGATATTGGCACTGGTAACT +
Preference number: 4 (lower is better)
Translates to: TVSEWVAFVLRHSLRAASQPANS*ILALVT
Trigger: AGTTACCAGTGCCAATATCCAGGAGTTTGCTGGCTG...GGAAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGGGCCGGTTGGCAGTGTaGAGCAGAGCTTGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKGRLAV*SRAWCG
Trigger: CCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCC...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCGCACAGGCCACACACTaGTCAGCCTCCGGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPAQATH*SASGPK
Trigger: TTTTGGACCGGAGGCTGACCAGTGTGTGGCCTGTGC...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp AAAACTAAACAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGATGACCACAAAGCGCTaGGGGTCCCTGGCCATGCGG +
Preference number: 4 (lower is better)
Translates to: KTKQKSTLYKAWILTPLLMTTKR*GSLAMR
Trigger: CCGCATGGCCAGGGACCCCCAGCGCTTTGTGGTCAT...CAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTGTTTAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp TTTCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCCAAGTCCTCATTCTaGATGACCACAAAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: FQGQSLNGSLLFLDTPLGPKSSF*MTTKRW
Trigger: CCAGCGCTTTGTGGTCATCCAGAATGAGGACTTGGG...CCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp CACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATCTTTTGCAAATGGACAAAGTaGGTGTGGAGAAGGACCCCC +
Preference number: 4 (lower is better)
Translates to: HLPPHTTPILPLGLYFIFCKWTK*VWRRTP
Trigger: GGGGGTCCTTCTCCACACCCACTTTGTCCATTTGCA...AAAGATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR CCA 90 bp GAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCAAAGAGTTGGACAGAATaGTTCCTGGTCACAATATTT +
Preference number: 4 (lower is better)
Translates to: ERAKLGCGIHWTLESHWAKSWTE*FLVTIF
Trigger: AAATATTGTGACCAGGAACCATTCTGTCCAACTCTT...TGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406381.6
CDS-3UTR CCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCGCACTGCGTTTGTCCTaGCCATTCTACTGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPALRLS*PFYWCP
Trigger: GGGGCACCAGTAGAATGGCCAGGACAAACGCAGTGC...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
3UTR CAA 72 bp GAGCGGTTGGTGTCTATCAGTGTGAGAGCCAGCTGGTaGTTCTTGTGGAAGATGTCCTTCCACAAAATCGTG +
Preference number: 4 (lower is better)
Translates to: ERLVSISVRASW*FLWKMSFHKIV
Trigger: CACGATTTTGTGGAAGGACATCTTCCACAAGAACAACCAGCTGGCTCTCACACTGATAGACACCAACCGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR TCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGGGTTCTGGAAGACGCTaGGGTCAGGCAGGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKGSGRR*GQAGCP
Trigger: CGGACAGCCTGCCTGACCTCAGCGTCTTCCAGAACC...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR TCA 90 bp CAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGTTCCTTCCTTCCAAAACAGGTCACTaGGCCATTCTGGGGCTGACA +
Preference number: 4 (lower is better)
Translates to: QKSTLYKAWILTPLLFLPSKTGH*AILGLT
Trigger: TGTCAGCCCCAGAATGGCTCAGTGACCTGTTTTGGA...AGGAAGGAACAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp AAAACTAAACAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGCCTCAAAGAGCTGGGTaGCTCGCACAATCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: KTKQKSTLYKAWILTPLLPQRAG*LAQSAA
Trigger: GGCTGCGGATTGTGCGAGGCACCCAGCTCTTTGAGG...CAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTGTTTAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGTCCCAGGGCACCGTGTaGACGAAGCAGAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKSQGTV*TKQRWV
Trigger: CACCCACCTCTGCTTCGTGCACACGGTGCCCTGGGA...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp TTTCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGATCCCCTTGGCAATCTaGATACACCAGTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: FQGQSLNGSLLFLDTPLGIPLAI*IHQFSR
Trigger: CCTGCTGAACTGGTGTATGCAGATTGCCAAGGGGAT...CCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp AAAACTAAACAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGGGGGGTCCCTGGCCATaGGGGAGAATTCAGACACCA +
Preference number: 4 (lower is better)
Translates to: KTKQKSTLYKAWILTPLLGGPWP*GRIQTP
Trigger: TGGTGTCTGAATTCTCCCGCATGGCCAGGGACCCCC...CAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTGTTTAGTTTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCTCTGAGTCTCTGTGCTaGACTGCGTTTGTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPSESLC*TAFVLA
Trigger: GGCCAGGACAAACGCAGTGCAGCACAGAGACTCAGA...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCTTGTCCTCAAAGAGCTaGGTGCCTCGCACAATCCGC +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPLSSKS*VPRTIR
Trigger: GCGGATTGTGCGAGGCACCCAGCTCTTTGAGGACAA...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp ATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAAAGCTGGTTGTTCTTGTaGAAGATGTCCTTCCACAAA +
Preference number: 4 (lower is better)
Translates to: IGQGLRIHKDSPVLFLFQSWLFL*KMSFHK
Trigger: TTTGTGGAAGGACATCTTCCACAAGAACAACCAGCT...TTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGTGGAGCTGCTCTGGCTaGAGCGGGGCAGTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKWSCSG*SGAVLE
Trigger: CTCCAACACTGCCCCGCTCCAGCCAGAGCAGCTCCA...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGGGGTTCCGAAAGAGCTaGTCCCAGGGCACCGTGTGC +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKGFRKS*SQGTVC
Trigger: GCACACGGTGCCCTGGGACCAGCTCTTTCGGAACCC...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCCATTCACATACTCCCTaGGGAGCCCCTGCAGTACTC +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPHSHTP*GAPAVL
Trigger: GAGTACTGCAGGGGCTCCCCAGGGAGTATGTGAATG...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp CACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATCTTTCTGGAAACTTCCAGATaGGCATGTAGGAGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: HLPPHTTPILPLGLYFIFLETSR*ACRRGQ
Trigger: CTGACCTCTCCTACATGCCCATCTGGAAGTTTCCAG...AAAGATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR CCA 90 bp CAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGTTCCTTCCTTGCGCCCTCCTCATCTaGAAACTTCCAGATGGGCAT +
Preference number: 4 (lower is better)
Translates to: QKSTLYKAWILTPLLFLPCALLI*KLPDGH
Trigger: ATGCCCATCTGGAAGTTTCCAGATGAGGAGGGCGCA...AGGAAGGAACAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp CCCACACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATCACTTTGATGGCCACTaGAATTTTCACATTCTCCCC +
Preference number: 4 (lower is better)
Translates to: PTLASPYNTHSPPGSLFHHFDGH*NFHILP
Trigger: GGGGAGAATGTGAAAATTCCAGTGGCCATCAAAGTG...ATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR CCA 90 bp TTTCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGTTGCCCCCATCTGCATaGTACTCTGTCTCGTCAATG +
Preference number: 4 (lower is better)
Translates to: FQGQSLNGSLLFLDTPLGLPPSA*YSVSSM
Trigger: CATTGACGAGACAGAGTACCATGCAGATGGGGGCAA...CCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp ACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTCCGGGACAGTCTCTGAATaGGTCGCTTTTGTTCTTAGA +
Preference number: 4 (lower is better)
Translates to: TVSEWVAFVLRHSLRAASGTVSE*VAFVLR
Trigger: TCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCC...GGAAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp CAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCAAAATATATTTGCAAATaGACAAAGTGGGTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: QRLPSAVPLPTRLDPFQPKYICK*TKWVWR
Trigger: TCTCCACACCCACTTTGTCCATTTGCAAATATATTT...TGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR CCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCCGTTGGACTCACGAGTaGGTGCAGTTGATGGGGCAA +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPRWTHE*VQLMGQ
Trigger: TTGCCCCATCAACTGCACCCACTCGTGAGTCCAACG...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR TCA 90 bp CCCACACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATTGTATAGGTAACCTGTaGTCTCTTCCAGAGTCTCAA +
Preference number: 4 (lower is better)
Translates to: PTLASPYNTHSPPGSLFHCIGNL*SLPESQ
Trigger: TTGAGACTCTGGAAGAGATCACAGGTTACCTATACA...ATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR TCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGGGGTGTTATGGTGGATaGGGGCCAGTCCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKGCYGG*GPVHCP
Trigger: TGGGCAGTGGACTGGCCCTCATCCACCATAACACCC...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR TCA 90 bp ACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTCCTTTCCCTCAACACTTTaGTGGCCACTGGAATTTTCA +
Preference number: 4 (lower is better)
Translates to: TVSEWVAFVLRHSLRAASFPSTL*WPLEFS
Trigger: TGAAAATTCCAGTGGCCATCAAAGTGTTGAGGGAAA...GGAAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR TCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGATGGCTGCCAGGGTCTaGGTCTCTGTGCTGCACTGC +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKMAARV*VSVLHC
Trigger: GCAGTGCAGCACAGAGACTCAGACCCTGGCAGCCAT...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR TCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCCTGGAGGTAGAGTGGTaGACAGGACAGCAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPLEVEW*TGQQRF
Trigger: GAACCTTTGCTGTCCTGTTCACCACTCTACCTCCAG...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR TCA 90 bp TTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACTCATCATCTTCACATTaGGTAGGCATAAGCCAAATT +
Preference number: 4 (lower is better)
Translates to: LGRASESTKTPQCCSSSNSSSSH*VGISQI
Trigger: AATTTGGCTTATGCCTACTCAATGTGAAGATGATGA...GTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584601.5
CDS-3UTR TCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGACGAGTGGGTGCAGTTaGTGGGGCAAGGCTGGCATG +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKTSGCS*WGKAGM
Trigger: CATGCCAGCCTTGCCCCATCAACTGCACCCACTCGT...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGTTCCAGGTTTCCCTaGACCACCTGGCAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKSSRFP*TTWQPW
Trigger: CCAGGGCTGCCAGGTGGTGCAGGGAAACCTGGAACT...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGCCTCAAAGAGCTGGGTaGCTCGCACAATCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKPQRAG*LAQSAA
Trigger: GGCTGCGGATTGTGCGAGGCACCCAGCTCTTTGAGG...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGGTCACCTCTTGGTTGTaGAGGGGGCAGACGAGGGTG +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKVTSWL*RGQTRV
Trigger: CACCCTCGTCTGCCCCCTGCACAACCAAGAGGTGAC...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGGGGCACAGGGCTTGCTaGACTTCTCACACCGCTGTG +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKGHRAC*TSHTAV
Trigger: CACAGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCC...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCATTGGCACTGGTAACTaGCCTCACCTCTCGCAAGTG +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPIGTGN*PHLSQV
Trigger: CACTTGCGAGAGGTGAGGGCAGTTACCAGTGCCAAT...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp AAAACTAAACAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGTGGAGCAGAGCTTGGTaGGGGTTCCGAAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KTKQKSTLYKAWILTPLLWSRAW*GFRKSW
Trigger: CCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCA...CAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTGTTTAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp TGGACCCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTAGTATCTCACTTTTGTaGATGTCCACAACAGTACAT +
Preference number: 4 (lower is better)
Translates to: WTLESHWAGPQNPQRLPSSISLL*MSTTVH
Trigger: ATGTACTGTTGTGGACATGCACAAAAGTGAGATACT...ACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584601.5
CDS-3UTR CCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCTGCACGAAGCAGAGGTaGGTGTTATGGTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPCTKQR*VLWWMR
Trigger: CCTCATCCACCATAACACCCACCTCTGCTTCGTGCA...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCTGCGCCCTCCTCATCTaGAAACTTCCAGATGGGCAT +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPCALLI*KLPDGH
Trigger: ATGCCCATCTGGAAGTTTCCAGATGAGGAGGGCGCA...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp TTTCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGTCCCATCGTAAGGTTTaGCCCCAAAAGTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: FQGQSLNGSLLFLDTPLGSHRKV*PQKSSA
Trigger: AGCTGATGACTTTTGGGGCCAAACCTTACGATGGGA...CCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCTATCGCCTCGATATATaGACACAGCAGGGGGACGAG +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPYRLDI*TQQGDE
Trigger: CTCGTCCCCCTGCTGTGTCCATATATCGAGGCGATA...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCTGCAGAAAAGACCGTTaGACTCACGAGTGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPCRKDR*THEWVQ
Trigger: CTGCACCCACTCGTGAGTCCAACGGTCTTTTCTGCA...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR TCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGCTTGGTTGTGAGCGATaGGCACGTAGCCCTGCACCT +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKLGCER*ARSPAP
Trigger: AGGTGCAGGGCTACGTGCTCATCGCTCACAACCAAG...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR TCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCCTTTCAAGATCTCTGTaGGGCTTCGAAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPLSRSL*GFEAAA
Trigger: AGCTGCAGCTTCGAAGCCTCACAGAGATCTTGAAAG...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR TCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCTGGTGTCTATCAGTGTaGGAGCCAGCTGGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPWCLSV*EPAGCS
Trigger: AGAACAACCAGCTGGCTCTCACACTGATAGACACCA...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR TCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGTGTCTGTGTTGTAGGTaGCCAGGGCTGGGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKCLCCR*PGLGSA
Trigger: TGCACTGCCCAGCCCTGGTCACCTACAACACAGACA...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR TCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCCCCCCGTTTTATCTGTaGCTCTTTGCTCAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPPPFYL*LFAQGV
Trigger: TACTCCCTGAGCAAAGAGTCACAGATAAAACGGGGG...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
47% GC, longest homopolymer 9 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp AAAACTAAACAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGACCTCCTGGATATCCTaGAGGAAGGACAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: KTKQKSTLYKAWILTPLLTSWIS*RKDRLA
Trigger: TGCCAGCCTGTCCTTCCTGCAGGATATCCAGGAGGT...CAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTGTTTAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR GCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGCACCGGCACAGACAGTaGGCGTCAGGCTCTGACAAT +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKHRHRQ*ASGSDN
Trigger: ATTGTCAGAGCCTGACGCGCACTGTCTGTGCCGGTG...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCCTGTGTTCCATCCTCTaGTGTCACCTCTTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPLCSIL*CHLLVV
Trigger: CACAACCAAGAGGTGACAGCAGAGGATGGAACACAG...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGTCAAACACTTGGAGCTaGTCTGGCTGGAGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKSNTWS*SGWSGA
Trigger: TGCCCCGCTCCAGCCAGAGCAGCTCCAAGTGTTTGA...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGTGGAGCAGAGCTTGGTaGGGGTTCCGAAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKWSRAW*GFRKSW
Trigger: CCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCA...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGTGTCACTCTCATCACTaGCTGCGCAGGCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKCHSHH*LRRHGC
Trigger: GCAGCCATGCCTGCGCAGGCAGTGATGAGAGTGACA...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGGTAGGTGACCAGGGCTaGGCAGTGCAGCTCACAGAT +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKVGDQG*AVQLTD
Trigger: ATCTGTGAGCTGCACTGCCCAGCCCTGGTCACCTAC...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGTCTGCTGTCACCTCTTaGTTGTGCAGGGGGCAGACG +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKSAVTS*LCRGQT
Trigger: CGTCTGCCCCCTGCACAACCAAGAGGTGACAGCAGA...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGGGCAGTGTTGGAGGCTaGGTCCCCATCAAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKGSVGG*VPIKAL
Trigger: GAGAGCTTTGATGGGGACCCAGCCTCCAACACTGCC...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCATTACTTGCAGGTTCTaGAAGACGCTGAGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPITCRF*KTLRSG
Trigger: GCCTGACCTCAGCGTCTTCCAGAACCTGCAAGTAAT...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGGTGTGGAGCAGAGCTTaGTGCGGGTTCCGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKVWSRA*CGFRKS
Trigger: GCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACAC...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGTGGCCCCGAAGGAACTaGCTGCAGTTGACACACTGG +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKWPRRN*LQLTHW
Trigger: CCAGTGTGTCAACTGCAGCCAGTTCCTTCGGGGCCA...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp AATGCCAGGCTCCCAAAGATCTTCTTGCAGCCAGCAAACTCCTGGATATTGGCATCTGTAATTTTGACATaGTTGGGACTCTTGACCAGC +
Preference number: 4 (lower is better)
Translates to: NARLPKIFLQPANSWILASVILT*LGLLTS
Trigger: GCTGGTCAAGAGTCCCAACCATGTCAAAATTACAGA...TGCCAATATCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAGCCTGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CCA 90 bp TTTCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGACTCTGTACAAAGCCTaGATACTGACACCATTGCTG +
Preference number: 4 (lower is better)
Translates to: FQGQSLNGSLLFLDTPLGTLYKA*ILTPLL
Trigger: CAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGT...CCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR TCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGGTGCGCGTCAGGCTCTaGCAATCCTCAGAACTCTCT +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKVRVRL*QSSELS
Trigger: AGAGAGTTCTGAGGATTGTCAGAGCCTGACGCGCAC...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGACCTCCTGGATATCCTaGAGGAAGGACAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKTSWIS*RKDRLA
Trigger: TGCCAGCCTGTCCTTCCTGCAGGATATCCAGGAGGT...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGCTCGCAAGTGCTCCATaGCCAGACCATAGCACACTC +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKLASAP*PDHSTL
Trigger: GAGTGTGCTATGGTCTGGGCATGGAGCACTTGCGAG...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp AAAACTAAACAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGATTGGCACTGGTAACTaGCCTCACCTCTCGCAAGTG +
Preference number: 4 (lower is better)
Translates to: KTKQKSTLYKAWILTPLLIGTGN*PHLSQV
Trigger: CACTTGCGAGAGGTGAGGGCAGTTACCAGTGCCAAT...CAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTGTTTAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR GCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGCGTCCCCGGATTACTTaGAGGTTCTGGAAGACGCTG +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKRPRIT*RFWKTL
Trigger: CAGCGTCTTCCAGAACCTGCAAGTAATCCGGGGACG...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGGGGTCTGAGTCTCTGTaGTGCACTGCGTTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKGSESL*CTAFVL
Trigger: CAGGACAAACGCAGTGCAGCACAGAGACTCAGACCC...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCTCATGTCTGTGCCGGTaGACACTCACTTTTGTGCAT +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPSCLCR*TLTFVH
Trigger: ATGCACAAAAGTGAGTGTGCACCGGCACAGACATGA...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCCAGCCAGCAAACTCCTaGATATTGGCACTGGTAACT +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPQPANS*ILALVT
Trigger: AGTTACCAGTGCCAATATCCAGGAGTTTGCTGGCTG...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGGTGGGTGTTATGGTaGATGAGGGCCAGTCCACTG +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKRWVLW*MRASPL
Trigger: CAGTGGACTGGCCCTCATCCACCATAACACCCACCT...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGCAGAGGTGGGTGTTATaGTGGATGAGGGCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKQRWVL*WMRASP
Trigger: TGGACTGGCCCTCATCCACCATAACACCCACCTCTG...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp AAAACTAAACAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGTGCACGAAGCAGAGGTaGGTGTTATGGTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: KTKQKSTLYKAWILTPLLCTKQR*VLWWMR
Trigger: CCTCATCCACCATAACACCCACCTCTGCTTCGTGCA...CAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTGTTTAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CCA 90 bp AAAACTAAACAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGCAGAAGAAGCCCTGCTaGGGTACCAGATACTCCTCA +
Preference number: 4 (lower is better)
Translates to: KTKQKSTLYKAWILTPLLQKKPC*GTRYSS
Trigger: TGAGGAGTATCTGGTACCCCAGCAGGGCTTCTTCTG...CAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTGTTTAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
3UTR CAA 72 bp ACACCAGCCATCACGTATGCTTCGTCTAAGATTTCTTaGTTGGCTTTGGGGGATGTGTTTTCCCTCAACACT +
Preference number: 4 (lower is better)
Translates to: TPAITYASSKIS*LALGDVFSLNT
Trigger: AGTGTTGAGGGAAAACACATCCCCCAAAGCCAACAAAGAAATCTTAGACGAAGCATACGTGATGGCTGGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR TCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGTCCAAAACAGGTCACTaGGCCATTCTGGGGCTGACA +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKSKTGH*AILGLT
Trigger: TGTCAGCCCCAGAATGGCTCAGTGACCTGTTTTGGA...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR TCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGCCCCAGAAAGACCCCTaGAAGGAAAGTCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKPQKDP*KESPPF
Trigger: GAAAGGAGGACTTTCCTTTCAGGGGTCTTTCTGGGG...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGGCTCTCCGGCAGAAATaGCAGGCTCCCAAAGATCTT +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKALRQK*QAPKDL
Trigger: AAGATCTTTGGGAGCCTGGCATTTCTGCCGGAGAGC...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGTGGCACGGCAAACAGTaGCTGGCATTCACATACTCC +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKWHGKQ*LAFTYS
Trigger: GGAGTATGTGAATGCCAGGCACTGTTTGCCGTGCCA...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGGTCTCTGTGCTGCACTaGGTTTGTCCTGGCCATTCT +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKVSVLH*VCPGHS
Trigger: AGAATGGCCAGGACAAACGCAGTGCAGCACAGAGAC...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCGAAAGTCCTCCTTTCTaGAGAAAAGACCGTTGGACT +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPESPPF*RKDRWT
Trigger: AGTCCAACGGTCTTTTCTGCAGAAAGGAGGACTTTC...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGCCTCGGGATTGGGCATaGACTCAAACGTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKPRDWA*TQTCLC
Trigger: ACACAGACACGTTTGAGTCCATGCCCAATCCCGAGG...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGAGTCTCAAACACTTaGAGCTGCTCTGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKRVSNT*SCSGWS
Trigger: GCTCCAGCCAGAGCAGCTCCAAGTGTTTGAGACTCT...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGACGGCAAACAGTGCCTaGCATTCACATACTCCCTGG +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKTANSA*HSHTPW
Trigger: CCAGGGAGTATGTGAATGCCAGGCACTGTTTGCCGT...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
3UTR CAA 72 bp ATCACGTATGCTTCGTCTAAGATTTCTTTGTTGGCTTaGGGGGATGTGTTTTCCCTCAACACTTTGATGGCC +
Preference number: 4 (lower is better)
Translates to: ITYASSKISLLA*GDVFSLNTLMA
Trigger: GGCCATCAAAGTGTTGAGGGAAAACACATCCCCCAAAGCCAACAAAGAAATCTTAGACGAAGCATACGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR TCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCTGTATAGGTAACCTGTaGTCTCTTCCAGAGTCTCAA +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPCIGNL*SLPESQ
Trigger: TTGAGACTCTGGAAGAGATCACAGGTTACCTATACA...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGTGGCCATTCTACTGGTaGCCCCGTTTTATCTGTGAC +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKWPFYW*PRFICD
Trigger: GTCACAGATAAAACGGGGGCACCAGTAGAATGGCCA...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCGCACACTCACTTTTGTaGATGTCCACAACAGTACAT +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPAHSLL*MSTTVH
Trigger: ATGTACTGTTGTGGACATGCACAAAAGTGAGTGTGC...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGGCAGCTTCATGTCTGTaGCGGTGCACACTCACTTTT +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKAASCL*RCTLTF
Trigger: AAAAGTGAGTGTGCACCGGCACAGACATGAAGCTGC...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCGAAAACACTTCAGTTTaGTCATTAACCCATCAGGCG +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPENTSV*SLTHQA
Trigger: CGCCTGATGGGTTAATGAGCAAACTGAAGTGTTTTC...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCAGCTGGTTGTTCTTGTaGAAGATGTCCTTCCACAAA +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPSWLFL*KMSFHK
Trigger: TTTGTGGAAGGACATCTTCCACAAGAACAACCAGCT...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGCTGGAAACTTCCAGATaGGCATGTAGGAGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKLETSR*ACRRGQ
Trigger: CTGACCTCTCCTACATGCCCATCTGGAAGTTTCCAG...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGTCCTGGCCATTCTACTaGTGCCCCCGTTTTATCTGT +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKSWPFY*CPRFIC
Trigger: ACAGATAAAACGGGGGCACCAGTAGAATGGCCAGGA...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGATCACCCTCGGGAGGTaGTACTTCAATTGCGACTCA +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKITLGR*YFNCDS
Trigger: TGAGTCGCAATTGAAGTACCACCTCCCGAGGGTGAT...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGTCCCAAAGATCTTCTTaGAGCCAGCAAACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKSQRSS*SQQTPG
Trigger: TCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGA...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGTGTGAGAGCCAGCTaGTTGTTCTTGTGGAAGATG +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKSVRAS*LFLWKM
Trigger: CATCTTCCACAAGAACAACCAGCTGGCTCTCACACT...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCCCACCATTCATTAAGTaGAAGTGGATCATCACAAAG +
Preference number: 4 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPPPFIK*KWIITK
Trigger: CTTTGTGATGATCCACTTCCACTTAATGAATGGTGG...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR GCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGTTATCTGTGACTCTTTaGTCAGGGAGTAGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKLSVTL*SGSSFA
Trigger: TGCAAAGCTACTCCCTGAGCAAAGAGTCACAGATAA...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR TCA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGTCATCATCTTCACATTaGGTAGGCATAAGCCAAATT +
Preference number: 4 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKSSSSH*VGISQI
Trigger: AATTTGGCTTATGCCTACTCAATGTGAAGATGATGA...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CCA 90 bp AAAACTAAACAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGAAATATATTTGCAAATaGACAAAGTGGGTGTGGAGA +
Preference number: 4 (lower is better)
Translates to: KTKQKSTLYKAWILTPLLKYICK*TKWVWR
Trigger: TCTCCACACCCACTTTGTCCATTTGCAAATATATTT...CAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTGTTTAGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR CAA 90 bp CCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCATGTGCCGGTGCACACTaGGGTGCTCGCGGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: PGERVLGLSRVAPAGRAACAGAH*GARGSG
Trigger: CCCGGAGCCGCGAGCACCCAAGTGTGCACCGGCACA...TGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCGGCCTGGCGGCGCGGTaGGTCCTGCTAGCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSGLAAR*VLLAGA
Trigger: TGCCCCAGCTAGCAGGACCAACCGCGCCGCCAGGCC...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584601.5
CDS CCA 90 bp AGCCCTGGTAGAGGTGGCGGAGCATGTCCAGGTGGGTCTCGGGACTaGCAGGGAGCCGCAGCTTCATGTCTGTGCCGGTGCACACCCACC +
Preference number: 5 (lower is better)
Translates to: SPGRGGGACPGGSRD*QGAAASCLCRCTPT
Trigger: GGTGGGTGTGCACCGGCACAGACATGAAGCTGCGGCTCCCTGCCAGTCCCGAGACCCACCTGGACATGCTCCGCCACCTCTACCAGGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578709.5
CDS-3UTR CAA 90 bp GGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTTGTGCCGGTGCACACTaGGGTGCTCGCGGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: GSPGSGRRALPPLDASRSCAGAH*GARGSG
Trigger: CCCGGAGCCGCGAGCACCCAAGTGTGCACCGGCACA...ACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269571.10
ENST00000578373.5
CDS-3UTR CAA 90 bp ACTCGTCCTCTGGCCGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAATGTGCCGGTGCACACTaGGGTGCTCGCGGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: TRPLAGWQCGAELGAGSECAGAH*GARGSG
Trigger: CCCGGAGCCGCGAGCACCCAAGTGTGCACCGGCACA...TTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CAA 90 bp ACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGTGGGCAGTGGCCCCTaGCAGCGGGCACAGCCACCG +
Preference number: 5 (lower is better)
Translates to: TPQCCSSSNEAGPLPAIWVGSGP*QRAQPP
Trigger: CGGTGGCTGTGCCCGCTGCAAGGGGCCACTGCCCAC...CCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp GGCTGGAGCGGGGCAGTGTTGGAGGCTGGGTCCCCATCAAAGCTCTCCGGCAGACGCATCTGCGCCTGGTaGGGCATCGCTCCGCTAGGT +
Preference number: 5 (lower is better)
Translates to: GWSGAVLEAGSPSKLSGRRICAW*GIAPLG
Trigger: ACCTAGCGGAGCGATGCCCAACCAGGCGCAGATGCG...TCTGCCGGAGAGCTTTGATGGGGACCCAGCCTCCAACACTGCCCCGCTCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CAA 90 bp CGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCCCCGCATCTGCGCCTGGTaGGGCATCGCTCCGCTAGGT +
Preference number: 5 (lower is better)
Translates to: RRALPPLDASRSQAFPAPRICAW*GIAPLG
Trigger: ACCTAGCGGAGCGATGCCCAACCAGGCGCAGATGCG...GGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCCCATGTGTGGGGAGGCTTaGCAGCCCCTTGGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: RRALPPLDASRSQAFPAPMCGEA*QPLGCP
Trigger: GGGGCAGCCAAGGGGCTGCAAAGCCTCCCCACACAT...GGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS TCA 90 bp AACCCTGCGGCTTCGAGGCGACCTACCTGGAGCTGGCCAGTGCTGTaGAGGAGCAGTATCCGGGCATCGAGATCGAGTCGCGCCTCGGGG +
Preference number: 5 (lower is better)
Translates to: NPAASRRPTWSWPVL*RSSIRASRSSRASG
Trigger: CCCCGAGGCGCGACTCGATCTCGATGCCCGGATACTGCTCCTTCACAGCACTGGCCAGCTCCAGGTAGGTCGCCTCGAAGCCGCAGGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584888.1
CDS TCA 90 bp CTGCATGCGCAGAGGGACAGGAACTGCAGCTGGCCTCGGGGGCAGTaGGTGGGTACCTCGGGCACAGGGCTTGCTGCACTTCTCACACCG +
Preference number: 5 (lower is better)
Translates to: LHAQRDRNCSWPRGQ*VGTSGTGLAALLTP
Trigger: CGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGGTACCCACTCACTGCCCCCGAGGCCAGCTGCAGTTCCTGTCCCTCTGCGCATGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584908.5
CDS GCA 90 bp GTCTGCACAAGTCCAAGAACGCTGCTGCCAGGGCCCCCTGGGCACTaGTGTGTGCTGGCAGATGGGGAGTGCGCACACTGGGCTCCCTGT +
Preference number: 5 (lower is better)
Translates to: VCTSPRTLLPGPPGH*CVLADGECAHWAPC
Trigger: ACAGGGAGCCCAGTGTGCGCACTCCCCATCTGCCAGCACACAGCAGTGCCCAGGGGGCCCTGGCAGCAGCGTTCTTGGACTTGTGCAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000582788.5
ENST00000583038.5
CDS CCA 90 bp AGCCCTGGTAGAGGTGGCGGAGCATGTCCAGGTGGGTCTCGGGACTaGCAGGGAGCCGCAGCTTCATGTCTGTGCCGGTGCACACTTGGG +
Preference number: 5 (lower is better)
Translates to: SPGRGGGACPGGSRD*QGAAASCLCRCTLG
Trigger: CCCAAGTGTGCACCGGCACAGACATGAAGCTGCGGCTCCCTGCCAGTCCCGAGACCCACCTGGACATGCTCCGCCACCTCTACCAGGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269571.10
ENST00000578373.5
ENST00000582648.5
ENST00000582788.5
ENST00000584450.5
ENST00000584908.5
CDS-3UTR CAA 90 bp CATGCCCAGACCATAGCACACTCGGGCACAGGGCTTGCTGCACTTCTCACACCGTGTGCCGGTGCACACTaGGGTGCTCGCGGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: HAQTIAHSGTGLAALLTPCAGAH*GARGSG
Trigger: CCCGGAGCCGCGAGCACCCAAGTGTGCACCGGCACA...CGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGTGTGCTATGGTCTGGGCATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CAA 90 bp GAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCAGTGGGCAGTGGCCCCTaGCAGCGGGCACAGCCACCG +
Preference number: 5 (lower is better)
Translates to: ERAKLGCGIHWTLESHWAVGSGP*QRAQPP
Trigger: CGGTGGCTGTGCCCGCTGCAAGGGGCCACTGCCCAC...TGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp ACCCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGTGGGCAGTGGCCCCTaGCAGCGGGCACAGCCACCG +
Preference number: 5 (lower is better)
Translates to: TPFFPGERVLGLSRVAPAVGSGP*QRAQPP
Trigger: CGGTGGCTGTGCCCGCTGCAAGGGGCCACTGCCCAC...TGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp CGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCCCGCTGTCACCTCTTGGTaGTGCAGGGGGCAGACGAGG +
Preference number: 5 (lower is better)
Translates to: RRALPPLDASRSQAFPAPAVTSW*CRGQTR
Trigger: CCTCGTCTGCCCCCTGCACAACCAAGAGGTGACAGC...GGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGGCTGATGCCCAGCCCTaGCAGGGTCAGCGAGTAGGC +
Preference number: 5 (lower is better)
Translates to: PLEVVGGPSHLLMPAEVRADAQP*QGQRVG
Trigger: GCCTACTCGCTGACCCTGCAAGGGCTGGGCATCAGC...CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp ACACTCGTCCTCTGGCCGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGGCTGATGCCCAGCCCTaGCAGGGTCAGCGAGTAGGC +
Preference number: 5 (lower is better)
Translates to: TLVLWPVGSVEQSLVRVPADAQP*QGQRVG
Trigger: GCCTACTCGCTGACCCTGCAAGGGCTGGGCATCAGC...CGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGAGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CAA 90 bp GGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTGCTGATGCCCAGCCCTaGCAGGGTCAGCGAGTAGGC +
Preference number: 5 (lower is better)
Translates to: GRRALPPLDASRSQAFPAADAQP*QGQRVG
Trigger: GCCTACTCGCTGACCCTGCAAGGGCTGGGCATCAGC...AGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp GGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCTCGTCCTCTGGCCGGTaGGCAGTGTGGAGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: GERVLGLSRVAPAGRAAGSSSGR*AVWSRA
Trigger: AGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGA...GCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp GGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCACGCATCTGCGCCTGGTaGGGCATCGCTCCGCTAGGT +
Preference number: 5 (lower is better)
Translates to: GRESWAFPEWHQQVGQQARICAW*GIAPLG
Trigger: ACCTAGCGGAGCGATGCCCAACCAGGCGCAGATGCG...TGCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp CGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCCCTCCAGCGCCATCCACTaGATGGGCACCTTGCCCCCA +
Preference number: 5 (lower is better)
Translates to: RRALPPLDASRSQAFPAPSSAIH*MGTLPP
Trigger: TGGGGGCAAGGTGCCCATCAAGTGGATGGCGCTGGA...GGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp ACACTCGTCCTCTGGCCGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAGGCTTTGCAGCCCCTaGGCTGCCCCCATTCCCAGG +
Preference number: 5 (lower is better)
Translates to: TLVLWPVGSVEQSLVRVPRLCSP*AAPIPR
Trigger: CCTGGGAATGGGGGCAGCCAAGGGGCTGCAAAGCCT...CGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGAGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS GCA 90 bp CCACACTCGTCCTCTGGCCGGTTGGCAGTGTGGAGCAGAGCTTGGTaGGGGTTCCGAAAGAGCTGGTCCCAGGGCACCGTGTGCACGAAG +
Preference number: 5 (lower is better)
Translates to: PHSSSGRLAVWSRAW*GFRKSWSQGTVCTK
Trigger: CTTCGTGCACACGGTGCCCTGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGAGTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582788.5
ENST00000583038.5
CDS GCA 90 bp CAAGTCCAAGAACGCTGCTGCCAGGGCCCCCTGGGCACTGCTGTGTaGTGGCAGATGGGGAGTGCGCACACTGGGCTCCCTGTCTTACCA +
Preference number: 5 (lower is better)
Translates to: QVQERCCQGPLGTAV*WQMGSAHTGLPVLP
Trigger: TGGTAAGACAGGGAGCCCAGTGTGCGCACTCCCCATCTGCCAGCACACAGCAGTGCCCAGGGGGCCCTGGCAGCAGCGTTCTTGGACTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000582788.5
ENST00000583038.5
CDS GCA 90 bp CCAGGTGGGTCTCGGGACTGGCAGGGAGCCGCAGCTTCATGTCTGTaGCGGTGCACACTTGTGGCTTCCAGGACCCCCGGGGCATATCTT +
Preference number: 5 (lower is better)
Translates to: PGGSRDWQGAAASCL*RCTLVASRTPGAYL
Trigger: AAGATATGCCCCGGGGGTCCTGGAAGCCACAAGTGTGCACCGGCACAGACATGAAGCTGCGGCTCCCTGCCAGTCCCGAGACCCACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584601.5
CDS CCA 90 bp AGCCCTGGTAGAGGTGGCGGAGCATGTCCAGGTGGGTCTCGGGACTaGCAGGGAGCCGCAGCTTCATGTCTGTGCCGGTGCACACTCACT +
Preference number: 5 (lower is better)
Translates to: SPGRGGGACPGGSRD*QGAAASCLCRCTLT
Trigger: AGTGAGTGTGCACCGGCACAGACATGAAGCTGCGGCTCCCTGCCAGTCCCGAGACCCACCTGGACATGCTCCGCCACCTCTACCAGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000578199.5
CDS CCA 90 bp AGCCCTGGTAGAGGTGGCGGAGCATGTCCAGGTGGGTCTCGGGACTaGCAGGGAGCCGCAGCTTCATGTCTGTGCCGGTGCACACTTGTG +
Preference number: 5 (lower is better)
Translates to: SPGRGGGACPGGSRD*QGAAASCLCRCTLV
Trigger: CACAAGTGTGCACCGGCACAGACATGAAGCTGCGGCTCCCTGCCAGTCCCGAGACCCACCTGGACATGCTCCGCCACCTCTACCAGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541774.5
ENST00000584601.5
CDS CCA 90 bp ATGCGCAGAGGGACAGGAACTGCAGCTGGCCTCGGGGGCAGTGAGTaGGTACCTCGGGCACAGGGCTTGCTGCACTTCTCACACCGCTGT +
Preference number: 5 (lower is better)
Translates to: MRRGTGTAAGLGGSE*VPRAQGLLHFSHRC
Trigger: ACAGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGGTACCCACTCACTGCCCCCGAGGCCAGCTGCAGTTCCTGTCCCTCTGCGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584908.5
CDS CCA 90 bp AGCCCTGGTAGAGGTGGCGGAGCATGTCCAGGTGGGTCTCGGGACTaGCAGGGAGCCGCAGCTTCATGTCTGTGCCGGTGCACACTCAGA +
Preference number: 5 (lower is better)
Translates to: SPGRGGGACPGGSRD*QGAAASCLCRCTLR
Trigger: TCTGAGTGTGCACCGGCACAGACATGAAGCTGCGGCTCCCTGCCAGTCCCGAGACCCACCTGGACATGCTCCGCCACCTCTACCAGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584099.1
CDS-3UTR CAA 90 bp GGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCAGCTGTCACCTCTTGGTaGTGCAGGGGGCAGACGAGG +
Preference number: 5 (lower is better)
Translates to: GRESWAFPEWHQQVGQQAAVTSW*CRGQTR
Trigger: CCTCGTCTGCCCCCTGCACAACCAAGAGGTGACAGC...TGCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp GGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCCTCTGCTGTCACCTCTaGGTTGTGCAGGGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: GERVLGLSRVAPAGRAAGLCCHL*VVQGAD
Trigger: GTCTGCCCCCTGCACAACCAAGAGGTGACAGCAGAG...GCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp TGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGACTCGGGCACAGGGCTaGCTGCACTTCTCACACCGC +
Preference number: 5 (lower is better)
Translates to: WGESLGPFQSGTSRSGSRTRAQG*LHFSHR
Trigger: GCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGT...CCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp GGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTGCTGATGCCCAGCCCTaGCAGGGTCAGCGAGTAGGC +
Preference number: 5 (lower is better)
Translates to: GSPGSGRRALPPLDASRSADAQP*QGQRVG
Trigger: GCCTACTCGCTGACCCTGCAAGGGCTGGGCATCAGC...ACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp ACACTCGTCCTCTGGCCGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGTCGTCCTCTGGCCGGTaGGCAGTGTGGAGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: TLVLWPVGSVEQSLVRVPSSSGR*AVWSRA
Trigger: AGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGA...CGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGAGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CAA 90 bp GGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTTCGTCCTCTGGCCGGTaGGCAGTGTGGAGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: GRRALPPLDASRSQAFPASSSGR*AVWSRA
Trigger: AGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGA...AGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp GGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCCAGGAGTGGGTGCAGTaGATGGGGCAAGGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: GERVLGLSRVAPAGRAAGQEWVQ*MGQGWH
Trigger: ATGCCAGCCTTGCCCCATCAACTGCACCCACTCCTG...GCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp GGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCATGTGTGGGGAGGCTTaGCAGCCCCTTGGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: GSGRRALPPLDASRSQAFMCGEA*QPLGCP
Trigger: GGGGCAGCCAAGGGGCTGCAAAGCCTCCCCACACAT...GAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGGCCCTCCCACCTCTaGATGCCAGCAGAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: PGERVLGLSRVAPAGRAAGPSHL*MPAEVR
Trigger: CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCC...TGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS TCA 90 bp GCAGTATCCGGGCATCGAGATCGAGTCGCGCCTCGGGGGCACAGGTaGGGCTCGCAGAACACCTGCTGGGTCAGTCTGTGCTCTGAATCC +
Preference number: 5 (lower is better)
Translates to: AVSGHRDRVAPRGHR*GSQNTCWVSLCSES
Trigger: GGATTCAGAGCACAGACTGACCCAGCAGGTGTTCTGCGAGCCTCACCTGTGCCCCCGAGGCGCGACTCGATCTCGATGCCCGGATACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584888.1
CDS GCA 90 bp CAGCTGGCCTCGGGGGCAGTGAGTGGGTACCTCGGGCACAGGGCTTaGTGCACTTCTCACACCGCTGTGTTCCATCCTCTGCTGTCACCT +
Preference number: 5 (lower is better)
Translates to: QLASGAVSGYLGHRA*CTSHTAVFHPLLSP
Trigger: AGGTGACAGCAGAGGATGGAACACAGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGGTACCCACTCACTGCCCCCGAGGCCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584908.5
CDS CCA 90 bp GGAGTGAAGGGCAATGAAGGGTACATCCTGGGGTCCAGGCCAACCTaGCTCTCTGCTCGGCGGGGCAGCCCTTGTCATCCAGGTCCACAC +
Preference number: 5 (lower is better)
Translates to: GVKGNEGYILGSRPT*LSARRGSPCHPGPH
Trigger: GTGTGGACCTGGATGACAAGGGCTGCCCCGCCGAGCAGAGAGCCAGGTTGGCCTGGACCCCAGGATGTACCCTTCATTGCCCTTCACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584684.1
CDS CCA 90 bp TTACCACACTCGTCCTCTGGCCGGTTGGCAGTGTGGAGCAGAGCTTaGTGCGGGTTCCGAAAGAGCTGGTCCCAGGGCACCGTGTGCACG +
Preference number: 5 (lower is better)
Translates to: LPHSSSGRLAVWSRA*CGFRKSWSQGTVCT
Trigger: CGTGCACACGGTGCCCTGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGAGTGTGGTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582788.5
ENST00000583038.5
CDS CCA 90 bp GGGGAGTGCGCACACTGGGCTCCCTGTCTTACCACACTCGTCCTCTaGCCGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAAA +
Preference number: 5 (lower is better)
Translates to: GECAHWAPCLTTLVL*PVGSVEQSLVRVPK
Trigger: TTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGAGTGTGGTAAGACAGGGAGCCCAGTGTGCGCACTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582788.5
ENST00000583038.5
CDS-3UTR CAA 90 bp GGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCATTCAGCGGGTCTCCATaGTCTAGCACGGCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: GRESWAFPEWHQQVGQQAFSGSP*SSTARA
Trigger: TGCCCTGGCCGTGCTAGACAATGGAGACCCGCTGAA...TGCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp GGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTTTCAGCGGGTCTCCATaGTCTAGCACGGCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: GRRALPPLDASRSQAFPAFSGSP*SSTARA
Trigger: TGCCCTGGCCGTGCTAGACAATGGAGACCCGCTGAA...AGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCGTGGGCAGTGGCCCCTaGCAGCGGGCACAGCCACCG +
Preference number: 5 (lower is better)
Translates to: LRIHKDSPVLFLFQRGWTVGSGP*QRAQPP
Trigger: CGGTGGCTGTGCCCGCTGCAAGGGGCCACTGCCCAC...GGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp ATGGCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCCAGATGCCACTGTGGTaGAAGTGGAGGCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: MAGSPGSGRRALPPLDASQMPLW*KWRQAR
Trigger: CCTGGCCTGCCTCCACTTCAACCACAGTGGCATCTG...GCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp GCAGAGCTTGGTGCGGGTTCCGAAAGAGCTGGTCCCAGGGCACCGTGTGCACGACAGATGCCACTGTGGTaGAAGTGGAGGCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: AELGAGSERAGPRAPCARQMPLW*KWRQAR
Trigger: CCTGGCCTGCCTCCACTTCAACCACAGTGGCATCTG...TCGTGCACACGGTGCCCTGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CAA 90 bp GGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCACAGATGCCACTGTGGTaGAAGTGGAGGCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GRESWAFPEWHQQVGQQAQMPLW*KWRQAR
Trigger: CCTGGCCTGCCTCCACTTCAACCACAGTGGCATCTG...TGCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp CCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTACCGGCCCTCGGGATaGGGCATGGACTCAAACGTG +
Preference number: 5 (lower is better)
Translates to: PGSGRRALPPLDASRSQAYRPSG*GMDSNV
Trigger: CACGTTTGAGTCCATGCCCAATCCCGAGGGCCGGTA...GGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp GGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCAGGGCCCTCTGCTGTCACCTCTaGGTTGTGCAGGGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: GQAGLWHPLDPRVSLGRALCCHL*VVQGAD
Trigger: GTCTGCCCCCTGCACAACCAAGAGGTGACAGCAGAG...GGCCCTGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CCATGCCCAGACCATAGCACACTCGGGCACAGGGCTTGCTGCACTTCTCACACCGCTGATGCCCAGCCCTaGCAGGGTCAGCGAGTAGGC +
Preference number: 5 (lower is better)
Translates to: PCPDHSTLGHRACCTSHTADAQP*QGQRVG
Trigger: GCCTACTCGCTGACCCTGCAAGGGCTGGGCATCAGC...GGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGTGTGCTATGGTCTGGGCATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CAA 90 bp GTACTCTGGGTTCTCTGCCGTAGGTGTCCCTTTGAAGGTGCTGGGTGGAGCCCCGCTGATGCCCAGCCCTaGCAGGGTCAGCGAGTAGGC +
Preference number: 5 (lower is better)
Translates to: VLWVLCRRCPFEGAGWSPADAQP*QGQRVG
Trigger: GCCTACTCGCTGACCCTGCAAGGGCTGGGCATCAGC...GGGGCTCCACCCAGCACCTTCAAAGGGACACCTACGGCAGAGAACCCAGAGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp AGTCCACTGCCCAGTTCCCTCAGTGAGCGCAGCCCCAGCCAGCTGATGCCCAGCAGTGTGGAGCAGAGCTaGGTGCGGGTTCCGAAAGAG +
Preference number: 5 (lower is better)
Translates to: SPLPSSLSERSPSQLMPSSVEQS*VRVPKE
Trigger: CTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACT...GCTGGGCATCAGCTGGCTGGGGCTGCGCTCACTGAGGGAACTGGGCAGTGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CAA 90 bp CTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGTCGTCCTCTGGCCGGTaGGCAGTGTGGAGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: LPSAVPLPTRLDPFQPSGSSSGR*AVWSRA
Trigger: AGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGA...CCCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp GGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCTGGTCCCAGGTCGTCCTCTGGCCGGTaGGCAGTGTGGAGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: GWQCGAELGAGSERAGPRSSSGR*AVWSRA
Trigger: AGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGA...CCTGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CAA 90 bp GGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTAGGAACTGGCTGCAGTaGACACACTGGGTGGGCCCT +
Preference number: 5 (lower is better)
Translates to: GRRALPPLDASRSQAFPARNWLQ*THWVGP
Trigger: AGGGCCCACCCAGTGTGTCAACTGCAGCCAGTTCCT...AGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAAGGAACTGGCTGCAGTaGACACACTGGGTGGGCCCT +
Preference number: 5 (lower is better)
Translates to: PGERVLGLSRVAPAGRAARNWLQ*THWVGP
Trigger: AGGGCCCACCCAGTGTGTCAACTGCAGCCAGTTCCT...TGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp CCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGCGGGGCAGCCCTaGTCATCCAGGTCCACACAG +
Preference number: 5 (lower is better)
Translates to: PILPWGESLGPFQSGTSRSAGQP*SSRSTQ
Trigger: CTGTGTGGACCTGGATGACAAGGGCTGCCCCGCCGA...CCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp CGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCCCCACTTGATGGGCACCTaGCCCCCATCTGCATGGTAC +
Preference number: 5 (lower is better)
Translates to: RRALPPLDASRSQAFPAPHLMGT*PPSAWY
Trigger: GTACCATGCAGATGGGGGCAAGGTGCCCATCAAGTG...GGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp GGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTTCCAGCGCCATCCACTaGATGGGCACCTTGCCCCCA +
Preference number: 5 (lower is better)
Translates to: GSPGSGRRALPPLDASRSSSAIH*MGTLPP
Trigger: TGGGGGCAAGGTGCCCATCAAGTGGATGGCGCTGGA...ACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp GGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCGCCGTAGGTGTCCCTTaGAAGGTGCTGGGTGGAGCC +
Preference number: 5 (lower is better)
Translates to: GSGRRALPPLDASRSQAFAVGVP*KVLGGA
Trigger: GGCTCCACCCAGCACCTTCAAAGGGACACCTACGGC...GAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp GGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTGCCGTAGGTGTCCCTTaGAAGGTGCTGGGTGGAGCC +
Preference number: 5 (lower is better)
Translates to: GSPGSGRRALPPLDASRSAVGVP*KVLGGA
Trigger: GGCTCCACCCAGCACCTTCAAAGGGACACCTACGGC...ACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS TCA 90 bp TCCGCAGCCTCTGCAGTGGGACCTGCCTCACTTGGTTGTGAGCGATaGGCACGTAGCCCTGCACCTCCTGGATATCCTGGGAGGGGGAAG +
Preference number: 5 (lower is better)
Translates to: SAASAVGPASLGCER*ARSPAPPGYPGRGK
Trigger: CTTCCCCCTCCCAGGATATCCAGGAGGTGCAGGGCTACGTGCTCATCGCTCACAACCAAGTGAGGCAGGTCCCACTGCAGAGGCTGCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583038.5
CDS GCA 90 bp CTGGCCTCGGGGGCAGTGAGTGGGTACCTCGGGCACAGGGCTTGCTaGACTTCTCACACCGCTGTGTTCCATCCTCTGCTGTCACCTCTT +
Preference number: 5 (lower is better)
Translates to: LASGAVSGYLGHRAC*TSHTAVFHPLLSPL
Trigger: AAGAGGTGACAGCAGAGGATGGAACACAGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGGTACCCACTCACTGCCCCCGAGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584908.5
CDS GCA 90 bp ATGCCCTTCACCTTCCTCAGCTCCGTCTCTTTCAGGATCCGCATCTaGGCCTGGTTGGGCATCGCTCCGCTAGGTGTCAGCGGCTCCACC +
Preference number: 5 (lower is better)
Translates to: MPFTFLSSVSFRIRI*AWLGIAPLGVSGST
Trigger: GGTGGAGCCGCTGACACCTAGCGGAGCGATGCCCAACCAGGCGCAGATGCGGATCCTGAAAGAGACGGAGCTGAGGAAGGTGAAGGGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582818.5
CDS CCA 90 bp ATCTGGCTGGTTCACATATTCCTGGTAGATGAGCTGCGGTGCCTGTaGTGGACCATGCCCCCAGCGCCCGGGGCAGGGTCTGGACAGAAG +
Preference number: 5 (lower is better)
Translates to: IWLVHIFLVDELRCL*WTMPPAPGAGSGQK
Trigger: CTTCTGTCCAGACCCTGCCCCGGGCGCTGGGGGCATGGTCCACCACAGGCACCGCAGCTCATCTACCAGGAATATGTGAACCAGCCAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584450.5
CDS-3UTR CAA 90 bp CGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTCCCGTGACAGGGGTGGTATaGTTCAGCGGGTCTCCATTG +
Preference number: 5 (lower is better)
Translates to: RRALPPLDASRSQAFPAPVTGVV*FSGSPL
Trigger: CAATGGAGACCCGCTGAACAATACCACCCCTGTCAC...GGGAGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp ACTCGTCCTCTGGCCGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAATACCGGCCCTCGGGATaGGGCATGGACTCAAACGTG +
Preference number: 5 (lower is better)
Translates to: TRPLAGWQCGAELGAGSEYRPSG*GMDSNV
Trigger: CACGTTTGAGTCCATGCCCAATCCCGAGGGCCGGTA...TTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CAA 90 bp AACTGCCCTCACCTCTCGCAAGTGCTCCATGCCCAGACCATAGCACACTCGGGCGCTGTCACCTCTTGGTaGTGCAGGGGGCAGACGAGG +
Preference number: 5 (lower is better)
Translates to: NCPHLSQVLHAQTIAHSGAVTSW*CRGQTR
Trigger: CCTCGTCTGCCCCCTGCACAACCAAGAGGTGACAGC...GCCCGAGTGTGCTATGGTCTGGGCATGGAGCACTTGCGAGAGGTGAGGGCAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CAA 90 bp GGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCGCTGTCACCTCTTGGTaGTGCAGGGGGCAGACGAGG +
Preference number: 5 (lower is better)
Translates to: GKGQAGLWHPLDPRVSLGAVTSW*CRGQTR
Trigger: CCTCGTCTGCCCCCTGCACAACCAAGAGGTGACAGC...GCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp GGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCTCTGCTGTCACCTCTaGGTTGTGCAGGGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: GSPGSGRRALPPLDASRSLCCHL*VVQGAD
Trigger: GTCTGCCCCCTGCACAACCAAGAGGTGACAGCAGAG...ACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp TCCCAGGGCACCGTGTGCACGAAGCAGAGGTGGGTGTTATGGTGGATGAGGGCCCTCTGCTGTCACCTCTaGGTTGTGCAGGGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: SQGTVCTKQRWVLWWMRALCCHL*VVQGAD
Trigger: GTCTGCCCCCTGCACAACCAAGAGGTGACAGCAGAG...GGCCCTCATCCACCATAACACCCACCTCTGCTTCGTGCACACGGTGCCCTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CAA 90 bp GGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCACTCGGGCACAGGGCTaGCTGCACTTCTCACACCGC +
Preference number: 5 (lower is better)
Translates to: GKGQAGLWHPLDPRVSLGTRAQG*LHFSHR
Trigger: GCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGT...GCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp GCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTGTGGAGCAGAGCTaGGTGCGGGTTCCGAAAGAG +
Preference number: 5 (lower is better)
Translates to: AGSPGSGRRALPPLDASRSVEQS*VRVPKE
Trigger: CTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACT...TCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp TCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGAGTGTGGAGCAGAGCTaGGTGCGGGTTCCGAAAGAG +
Preference number: 5 (lower is better)
Translates to: SLGRESWAFPEWHQQVGQSVEQS*VRVPKE
Trigger: CTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACT...CTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp CCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGAGTGTGGAGCAGAGCTaGGTGCGGGTTCCGAAAGAG +
Preference number: 5 (lower is better)
Translates to: PLEVVGGPSHLLMPAEVRSVEQS*VRVPKE
Trigger: CTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACT...CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp GGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCTCGTCCTCTGGCCGGTaGGCAGTGTGGAGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: GKGQAGLWHPLDPRVSLGSSSGR*AVWSRA
Trigger: AGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGA...GCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCAGGAGTGGGTGCAGTaGATGGGGCAAGGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSQEWVQ*MGQGWH
Trigger: ATGCCAGCCTTGCCCCATCAACTGCACCCACTCCTG...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGTCGGCGGGGCAGCCCTaGTCATCCAGGTCCACACAG +
Preference number: 5 (lower is better)
Translates to: PQRLPSAVPLPTRLDPFQSAGQP*SSRSTQ
Trigger: CTGTGTGGACCTGGATGACAAGGGCTGCCCCGCCGA...CTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp TGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGACATGGTTGGGACTCTaGACCAGCACGTTCCGAGCG +
Preference number: 5 (lower is better)
Translates to: WGESLGPFQSGTSRSGSRTWLGL*TSTFRA
Trigger: CGCTCGGAACGTGCTGGTCAAGAGTCCCAACCATGT...CCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp ACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGTCCAGCGCCATCCACTaGATGGGCACCTTGCCCCCA +
Preference number: 5 (lower is better)
Translates to: TPQCCSSSNEAGPLPAIWSSAIH*MGTLPP
Trigger: TGGGGGCAAGGTGCCCATCAAGTGGATGGCGCTGGA...CCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CCATGCCCAGACCATAGCACACTCGGGCACAGGGCTTGCTGCACTTCTCACACCTCCAGCGCCATCCACTaGATGGGCACCTTGCCCCCA +
Preference number: 5 (lower is better)
Translates to: PCPDHSTLGHRACCTSHTSSAIH*MGTLPP
Trigger: TGGGGGCAAGGTGCCCATCAAGTGGATGGCGCTGGA...GGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGTGTGCTATGGTCTGGGCATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CAA 90 bp TTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGTCCAGCGCCATCCACTaGATGGGCACCTTGCCCCCA +
Preference number: 5 (lower is better)
Translates to: FFPGERVLGLSRVAPAGRSSAIH*MGTLPP
Trigger: TGGGGGCAAGGTGCCCATCAAGTGGATGGCGCTGGA...CCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp CCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGAGGCTTTGCAGCCCCTaGGCTGCCCCCATTCCCAGG +
Preference number: 5 (lower is better)
Translates to: PQRLPSAVPLPTRLDPFQRLCSP*AAPIPR
Trigger: CCTGGGAATGGGGGCAGCCAAGGGGCTGCAAAGCCT...CTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCAATGTGTGGGGAGGCTTaGCAGCCCCTTGGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: QRLPSAVPLPTRLDPFQPMCGEA*QPLGCP
Trigger: GGGGCAGCCAAGGGGCTGCAAAGCCTCCCCACACAT...TGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp GTTCTTAGACACTCCCTTAGGGCCGCTTCCCCTCTCAGGCCAGCTTCCCTAAGGATGTGTGGGGAGGCTTaGCAGCCCCTTGGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: VLRHSLRAASPLRPASLRMCGEA*QPLGCP
Trigger: GGGGCAGCCAAGGGGCTGCAAAGCCTCCCCACACAT...CCTTAGGGAAGCTGGCCTGAGAGGGGAAGCGGCCCTAAGGGAGTGTCTAAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CAA 90 bp TGGGACCTGCCTCACTTGGTTGTGAGCGATGAGCACGTAGCCCTGCACCTCCTGGCCGTAGGTGTCCCTTaGAAGGTGCTGGGTGGAGCC +
Preference number: 5 (lower is better)
Translates to: WDLPHLVVSDEHVALHLLAVGVP*KVLGGA
Trigger: GGCTCCACCCAGCACCTTCAAAGGGACACCTACGGC...CAGGAGGTGCAGGGCTACGTGCTCATCGCTCACAACCAAGTGAGGCAGGTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CAA 90 bp TCACACTGGCACGTCCAGACCCAGGTACTCTGGGTTCTCTGCCGTAGGTGTCCCGCCGTAGGTGTCCCTTaGAAGGTGCTGGGTGGAGCC +
Preference number: 5 (lower is better)
Translates to: SHWHVQTQVLWVLCRRCPAVGVP*KVLGGA
Trigger: GGCTCCACCCAGCACCTTCAAAGGGACACCTACGGC...GGGACACCTACGGCAGAGAACCCAGAGTACCTGGGTCTGGACGTGCCAGTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp CCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCAGGGCTTCTGCGGACTaGGCCTTCTGGTTCACACTG +
Preference number: 5 (lower is better)
Translates to: PGSGRRALPPLDASRSQARASAD*AFWFTL
Trigger: CAGTGTGAACCAGAAGGCCAAGTCCGCAGAAGCCCT...GGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp AGGGCCGCTTCCCCTCTCAGGCCAGCTTCCCTAAGGCTTTCAGTACCCAGGATCTTCAGCGGGTCTCCATaGTCTAGCACGGCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: RAASPLRPASLRLSVPRIFSGSP*SSTARA
Trigger: TGCCCTGGCCGTGCTAGACAATGGAGACCCGCTGAA...GATCCTGGGTACTGAAAGCCTTAGGGAAGCTGGCCTGAGAGGGGAAGCGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CAA 90 bp GCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAGTGACAGGGGTGGTATaGTTCAGCGGGTCTCCATTG +
Preference number: 5 (lower is better)
Translates to: AGSPGSGRRALPPLDASRVTGVV*FSGSPL
Trigger: CAATGGAGACCCGCTGAACAATACCACCCCTGTCAC...TCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp TGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGGTGACAGGGGTGGTATaGTTCAGCGGGTCTCCATTG +
Preference number: 5 (lower is better)
Translates to: WGESLGPFQSGTSRSGSRVTGVV*FSGSPL
Trigger: CAATGGAGACCCGCTGAACAATACCACCCCTGTCAC...CCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp GGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCGTGAGAGCCAGCTGGTaGTTCTTGTGGAAGATGTCC +
Preference number: 5 (lower is better)
Translates to: GERVLGLSRVAPAGRAAGVRASW*FLWKMS
Trigger: GGACATCTTCCACAAGAACAACCAGCTGGCTCTCAC...GCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp TTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAGGTTCCTGTGGGCAGTGGCCCCTaGCAGCGGGCACAGCCACCG +
Preference number: 5 (lower is better)
Translates to: FQPSGNSSRKEGSLGQVPVGSGP*QRAQPP
Trigger: CGGTGGCTGTGCCCGCTGCAAGGGGCCACTGCCCAC...AGGAACCTGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp GGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCTACCGGCCCTCGGGATaGGGCATGGACTCAAACGTG +
Preference number: 5 (lower is better)
Translates to: GKGQAGLWHPLDPRVSLGYRPSG*GMDSNV
Trigger: CACGTTTGAGTCCATGCCCAATCCCGAGGGCCGGTA...GCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTACCGGCCCTCGGGATaGGGCATGGACTCAAACGTG +
Preference number: 5 (lower is better)
Translates to: PILPWGESLGPFQSGTSRYRPSG*GMDSNV
Trigger: CACGTTTGAGTCCATGCCCAATCCCGAGGGCCGGTA...CCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp TGCTCTGGCTGGAGCGGGGCAGTGTTGGAGGCTGGGTCCCCATCAAAGCTCTCCCAGAGTCTCAAACACTaGGAGCTGCTCTGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: CSGWSGAVLEAGSPSKLSQSLKH*ELLWLE
Trigger: CTCCAGCCAGAGCAGCTCCAAGTGTTTGAGACTCTG...GGAGAGCTTTGATGGGGACCCAGCCTCCAACACTGCCCCGCTCCAGCCAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CAA 90 bp CCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCACAGAGTCTCAAACACTaGGAGCTGCTCTGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: PGERVLGLSRVAPAGRAAQSLKH*ELLWLE
Trigger: CTCCAGCCAGAGCAGCTCCAAGTGTTTGAGACTCTG...TGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp GTACTCTGGGTTCTCTGCCGTAGGTGTCCCTTTGAAGGTGCTGGGTGGAGCCCCAGGAACTGGCTGCAGTaGACACACTGGGTGGGCCCT +
Preference number: 5 (lower is better)
Translates to: VLWVLCRRCPFEGAGWSPRNWLQ*THWVGP
Trigger: AGGGCCCACCCAGTGTGTCAACTGCAGCCAGTTCCT...GGGGCTCCACCCAGCACCTTCAAAGGGACACCTACGGCAGAGAACCCAGAGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp TGGGACCTGCCTCACTTGGTTGTGAGCGATGAGCACGTAGCCCTGCACCTCCTGCAGGAGTGGGTGCAGTaGATGGGGCAAGGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: WDLPHLVVSDEHVALHLLQEWVQ*MGQGWH
Trigger: ATGCCAGCCTTGCCCCATCAACTGCACCCACTCCTG...CAGGAGGTGCAGGGCTACGTGCTCATCGCTCACAACCAAGTGAGGCAGGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CAA 90 bp CCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGTTCTGCTGCCGTCGCTaGATGAGGATCCCAAAGACC +
Preference number: 5 (lower is better)
Translates to: PLEVVGGPSHLLMPAEVRFCCRR*MRIPKT
Trigger: GGTCTTTGGGATCCTCATCAAGCGACGGCAGCAGAA...CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp GGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCATTCTGCTGCCGTCGCTaGATGAGGATCCCAAAGACC +
Preference number: 5 (lower is better)
Translates to: GRESWAFPEWHQQVGQQAFCCRR*MRIPKT
Trigger: GGTCTTTGGGATCCTCATCAAGCGACGGCAGCAGAA...TGCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp GGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTACATGGTTGGGACTCTaGACCAGCACGTTCCGAGCG +
Preference number: 5 (lower is better)
Translates to: GSPGSGRRALPPLDASRSTWLGL*TSTFRA
Trigger: CGCTCGGAACGTGCTGGTCAAGAGTCCCAACCATGT...ACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp GGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCCCAACTCCCGGAATCTaGGCCGACATTCAGAGTCAA +
Preference number: 5 (lower is better)
Translates to: GERVLGLSRVAPAGRAAGPTPGI*ADIQSQ
Trigger: TTGACTCTGAATGTCGGCCAAGATTCCGGGAGTTGG...GCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp CCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCCCAACTCCCGGAATCTaGGCCGACATTCAGAGTCAA +
Preference number: 5 (lower is better)
Translates to: PWGESLGPFQSGTSRSGSPTPGI*ADIQSQ
Trigger: TTGACTCTGAATGTCGGCCAAGATTCCGGGAGTTGG...GCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp CCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGTGTGCTGCACTGCGTTaGTCCTGGCCATTCTACTGG +
Preference number: 5 (lower is better)
Translates to: PLEVVGGPSHLLMPAEVRCAALR*SWPFYW
Trigger: CCAGTAGAATGGCCAGGACAAACGCAGTGCAGCACA...CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584601.5
CDS TCA 90 bp TCCGCAGCCTCTGCAGTGGGACCTGCCTCACTTGGTTGTGAGCGATaGGCACGTAGCCCTGCACCTCCTGGATATCCTGCAGGAAGGACA +
Preference number: 5 (lower is better)
Translates to: SAASAVGPASLGCER*ARSPAPPGYPAGRT
Trigger: TGTCCTTCCTGCAGGATATCCAGGAGGTGCAGGGCTACGTGCTCATCGCTCACAACCAAGTGAGGCAGGTCCCACTGCAGAGGCTGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578199.5
ENST00000578709.5
ENST00000584099.1
ENST00000584450.5
ENST00000584601.5
ENST00000584908.5
CDS GCA 90 bp TGCCAAGAGGCCAAGCCAGCCAGAGCTGTGCTGAGTCAAGAAGGGTaGACAGAGACGGGCAGTCTGCACAAGTCCAAGAACGCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: CQEAKPARAVLSQEG*TETGSLHKSKNAAA
Trigger: GGCAGCAGCGTTCTTGGACTTGTGCAGACTGCCCGTCTCTGTGCACCCTTCTTGACTCAGCACAGCTCTGGCTGGCTTGGCCTCTTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582788.5
ENST00000583038.5
CDS GCA 90 bp CAGCCTCCTCTGCTCCTTGGTCCTTCACCTAACCTTGCCCCCATCTaGATGGTACTCTGTCTCGTCAATGTCCAGCAGCCGAGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: QPPLLLGPSPNLAPI*MVLCLVNVQQPSQP
Trigger: GGGCTGGCTCGGCTGCTGGACATTGACGAGACAGAGTACCATGCAGATGGGGGCAAGGTTAGGTGAAGGACCAAGGAGCAGAGGAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583038.5
CDS CCA 90 bp GCCGGTGCACACCCACCTCGGCTCTCTTCCCAGGGGGAGGATGGGTaGCCAAACATAAGATGGAGATGTCACTCTAGAGGGGCTTCTCAC +
Preference number: 5 (lower is better)
Translates to: AGAHPPRLSSQGEDG*PNIRWRCHSRGASH
Trigger: GTGAGAAGCCCCTCTAGAGTGACATCTCCATCTTATGTTTGGCCACCCATCCTCCCCCTGGGAAGAGAGCCGAGGTGGGTGTGCACCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578709.5
CDS CCA 90 bp GGGAGGGCAGAAGAGGAAGTCCTCCAACTGTGTGTTGTGGGGAGGTaGCCACTCAGAGTTCTCCCATGGGCTAGACACCACTCCACCCAG +
Preference number: 5 (lower is better)
Translates to: GRAEEEVLQLCVVGR*PLRVLPWARHHSTQ
Trigger: CTGGGTGGAGTGGTGTCTAGCCCATGGGAGAACTCTGAGTGGCCACCTCCCCACAACACACAGTTGGAGGACTTCCTCTTCTGCCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583038.5
CDS-3UTR CAA 90 bp TCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGGCCAGCTGGTTGTTCTaGTGGAAGATGTCCTTCCAC +
Preference number: 5 (lower is better)
Translates to: SLGRESWAFPEWHQQVGQASWLF*WKMSFH
Trigger: GTGGAAGGACATCTTCCACAAGAACAACCAGCTGGC...CTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp CCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCGTGAGAGCCAGCTGGTaGTTCTTGTGGAAGATGTCC +
Preference number: 5 (lower is better)
Translates to: PGSGRRALPPLDASRSQAVRASW*FLWKMS
Trigger: GGACATCTTCCACAAGAACAACCAGCTGGCTCTCAC...GGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp GGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCAGGGCCGTGAGAGCCAGCTGGTaGTTCTTGTGGAAGATGTCC +
Preference number: 5 (lower is better)
Translates to: GQAGLWHPLDPRVSLGRAVRASW*FLWKMS
Trigger: GGACATCTTCCACAAGAACAACCAGCTGGCTCTCAC...GGCCCTGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp GTTCTTAGACACTCCCTTAGGGCCGCTTCCCCTCTCAGGCCAGCTTCCCTAAGGCAGATGCCACTGTGGTaGAAGTGGAGGCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: VLRHSLRAASPLRPASLRQMPLW*KWRQAR
Trigger: CCTGGCCTGCCTCCACTTCAACCACAGTGGCATCTG...CCTTAGGGAAGCTGGCCTGAGAGGGGAAGCGGCCCTAAGGGAGTGTCTAAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CAA 90 bp CCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCAGATGCCACTGTGGTaGAAGTGGAGGCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PQRLPSAVPLPTRLDPFQQMPLW*KWRQAR
Trigger: CCTGGCCTGCCTCCACTTCAACCACAGTGGCATCTG...CTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp GTTCTTAGACACTCCCTTAGGGCCGCTTCCCCTCTCAGGCCAGCTTCCCTAAGGCTCTGCTGTCACCTCTaGGTTGTGCAGGGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: VLRHSLRAASPLRPASLRLCCHL*VVQGAD
Trigger: GTCTGCCCCCTGCACAACCAAGAGGTGACAGCAGAG...CCTTAGGGAAGCTGGCCTGAGAGGGGAAGCGGCCCTAAGGGAGTGTCTAAGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CAA 90 bp CCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCCTCCCAAAGATCTTCTaGCAGCCAGCAAACTCCTGG +
Preference number: 5 (lower is better)
Translates to: PGSGRRALPPLDASRSQALPKIF*QPANSW
Trigger: CCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAG...GGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCTGGTCCCAGCAGAGTCTCAAACACTaGGAGCTGCTCTGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: RLAVWSRAWCGFRKSWSQQSLKH*ELLWLE
Trigger: CTCCAGCCAGAGCAGCTCCAAGTGTTTGAGACTCTG...CTGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CAA 90 bp GAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCAGAGTCTCAAACACTaGGAGCTGCTCTGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: EVVGGPSHLLMPAEVRPSQSLKH*ELLWLE
Trigger: CTCCAGCCAGAGCAGCTCCAAGTGTTTGAGACTCTG...GGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCGCTGATGCCCAGCCCTaGCAGGGTCAGCGAGTAGGC +
Preference number: 5 (lower is better)
Translates to: LRIHKDSPVLFLFQRGWTADAQP*QGQRVG
Trigger: GCCTACTCGCTGACCCTGCAAGGGCTGGGCATCAGC...GGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGAGGAACTGGCTGCAGTaGACACACTGGGTGGGCCCT +
Preference number: 5 (lower is better)
Translates to: PQRLPSAVPLPTRLDPFQRNWLQ*THWVGP
Trigger: AGGGCCCACCCAGTGTGTCAACTGCAGCCAGTTCCT...CTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCAGGAGTGGGTGCAGTaGATGGGGCAAGGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: PQRLPSAVPLPTRLDPFQQEWVQ*MGQGWH
Trigger: ATGCCAGCCTTGCCCCATCAACTGCACCCACTCCTG...CTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp TGGATATTGGCACTGGTAACTGCCCTCACCTCTCGCAAGTGCTCCATGCCCAGATCGGCGGGGCAGCCCTaGTCATCCAGGTCCACACAG +
Preference number: 5 (lower is better)
Translates to: WILALVTALTSRKCSMPRSAGQP*SSRSTQ
Trigger: CTGTGTGGACCTGGATGACAAGGGCTGCCCCGCCGA...TCTGGGCATGGAGCACTTGCGAGAGGTGAGGGCAGTTACCAGTGCCAATATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CAA 90 bp CTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCTCGGCGGGGCAGCCCTaGTCATCCAGGTCCACACAG +
Preference number: 5 (lower is better)
Translates to: LRIHKDSPVLFLFQRGWTSAGQP*SSRSTQ
Trigger: CTGTGTGGACCTGGATGACAAGGGCTGCCCCGCCGA...GGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp TCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCCGCATCTGCGCCTGGTaGGGCATCGCTCCGCTAGGT +
Preference number: 5 (lower is better)
Translates to: SLGRASESTKTPQCCSSSRICAW*GIAPLG
Trigger: ACCTAGCGGAGCGATGCCCAACCAGGCGCAGATGCG...GGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp GTACTCTGGGTTCTCTGCCGTAGGTGTCCCTTTGAAGGTGCTGGGTGGAGCCCCCACTTGATGGGCACCTaGCCCCCATCTGCATGGTAC +
Preference number: 5 (lower is better)
Translates to: VLWVLCRRCPFEGAGWSPHLMGT*PPSAWY
Trigger: GTACCATGCAGATGGGGGCAAGGTGCCCATCAAGTG...GGGGCTCCACCCAGCACCTTCAAAGGGACACCTACGGCAGAGAACCCAGAGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp GCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGACCAACTCCCGGAATCTaGGCCGACATTCAGAGTCAA +
Preference number: 5 (lower is better)
Translates to: AGSPGSGRRALPPLDASRPTPGI*ADIQSQ
Trigger: TTGACTCTGAATGTCGGCCAAGATTCCGGGAGTTGG...TCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCAACTCCCGGAATCTaGGCCGACATTCAGAGTCAA +
Preference number: 5 (lower is better)
Translates to: PLEVVGGPSHLLMPAEVRPTPGI*ADIQSQ
Trigger: TTGACTCTGAATGTCGGCCAAGATTCCGGGAGTTGG...CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCAGGCTTTGCAGCCCCTaGGCTGCCCCCATTCCCAGG +
Preference number: 5 (lower is better)
Translates to: LRIHKDSPVLFLFQRGWTRLCSP*AAPIPR
Trigger: CCTGGGAATGGGGGCAGCCAAGGGGCTGCAAAGCCT...GGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp GGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCTGTGCTGCACTGCGTTaGTCCTGGCCATTCTACTGG +
Preference number: 5 (lower is better)
Translates to: GSGRRALPPLDASRSQAFCAALR*SWPFYW
Trigger: CCAGTAGAATGGCCAGGACAAACGCAGTGCAGCACA...GAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584601.5
CDS GCA 90 bp TCACTGCCTGCGCAGGCATGGCTGCCAGGGTCTGAGTCTCTGTGCTaGACTGCGTTTGTCCTGGCCATTCTACTGGTGCCCCCGTTTTAT +
Preference number: 5 (lower is better)
Translates to: SLPAQAWLPGSESLC*TAFVLAILLVPPFY
Trigger: ATAAAACGGGGGCACCAGTAGAATGGCCAGGACAAACGCAGTGCAGCACAGAGACTCAGACCCTGGCAGCCATGCCTGCGCAGGCAGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406381.6
ENST00000578199.5
ENST00000584014.5
ENST00000584601.5
CDS GCA 90 bp CCGTTGGACTCACGAGTGGGTGCAGTTGATGGGGCAAGGCTGGCATaGGCCCTCCTCATCTGGAAACTTCCAGATGGGCATGTAGGAGAG +
Preference number: 5 (lower is better)
Translates to: PLDSRVGAVDGARLA*ALLIWKLPDGHVGE
Trigger: CTCTCCTACATGCCCATCTGGAAGTTTCCAGATGAGGAGGGCGCATGCCAGCCTTGCCCCATCAACTGCACCCACTCGTGAGTCCAACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578199.5
ENST00000582788.5
CDS CCA 90 bp GCCATCGCACCCGGCCGGCGTCTGCAATTTGACAAACCAAGCATGTaGCCCCATTCCAGGGTCTGTGGACACGATCCAGCAGGTTGGTTT +
Preference number: 5 (lower is better)
Translates to: AIAPGRRLQFDKPSM*PHSRVCGHDPAGWF
Trigger: AAACCAACCTGCTGGATCGTGTCCACAGACCCTGGAATGGGGCCACATGCTTGGTTTGTCAAATTGCAGACGCCGGCCGGGTGCGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583038.5
CDS CCA 90 bp CTCCTCTGCTCCTTGGTCCTTCACCTAACCTTGCCCCCATCTGCATaGTACTCTGTCTCGTCAATGTCCAGCAGCCGAGCCAGCCCGAAG +
Preference number: 5 (lower is better)
Translates to: LLCSLVLHLTLPPSA*YSVSSMSSSRASPK
Trigger: CTTCGGGCTGGCTCGGCTGCTGGACATTGACGAGACAGAGTACCATGCAGATGGGGGCAAGGTTAGGTGAAGGACCAAGGAGCAGAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583038.5
CDS CCA 90 bp CCAGCAGGTCAGGGATCTCCCGGGCTGGGATCCCATCGTAAGGTTTaGCCCCAAAAGTCATCAGCTCCCACACAGTCACACCTAAGGCAG +
Preference number: 5 (lower is better)
Translates to: PAGQGSPGLGSHRKV*PQKSSAPTQSHLRQ
Trigger: CTGCCTTAGGTGTGACTGTGTGGGAGCTGATGACTTTTGGGGCCAAACCTTACGATGGGATCCCAGCCCGGGAGATCCCTGACCTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583038.5
CDS-3UTR CAA 90 bp ACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGTGACAGGGGTGGTATaGTTCAGCGGGTCTCCATTG +
Preference number: 5 (lower is better)
Translates to: TPQCCSSSNEAGPLPAIWVTGVV*FSGSPL
Trigger: CAATGGAGACCCGCTGAACAATACCACCCCTGTCAC...CCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATCTTTGTGGGCAGTGGCCCCTaGCAGCGGGCACAGCCACCG +
Preference number: 5 (lower is better)
Translates to: HLPPHTTPILPLGLYFIFVGSGP*QRAQPP
Trigger: CGGTGGCTGTGCCCGCTGCAAGGGGCCACTGCCCAC...AAAGATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR CAA 90 bp CAGCGAGTAGGCGCCATTGTGCAGAATTCGTCCCCGGATTACTTGCAGGTTCTGGCTGTCACCTCTTGGTaGTGCAGGGGGCAGACGAGG +
Preference number: 5 (lower is better)
Translates to: QRVGAIVQNSSPDYLQVLAVTSW*CRGQTR
Trigger: CCTCGTCTGCCCCCTGCACAACCAAGAGGTGACAGC...CAGAACCTGCAAGTAATCCGGGGACGAATTCTGCACAATGGCGCCTACTCGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CAA 90 bp AGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCACTCGGGCACAGGGCTaGCTGCACTTCTCACACCGC +
Preference number: 5 (lower is better)
Translates to: SLIGQGLRIHKDSPVLFLTRAQG*LHFSHR
Trigger: GCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGT...GAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp GGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCTCCCAAAGATCTTCTaGCAGCCAGCAAACTCCTGG +
Preference number: 5 (lower is better)
Translates to: GSGRRALPPLDASRSQAFLPKIF*QPANSW
Trigger: CCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAG...GAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGAGTGTGGAGCAGAGCTaGGTGCGGGTTCCGAAAGAG +
Preference number: 5 (lower is better)
Translates to: PQRLPSAVPLPTRLDPFQSVEQS*VRVPKE
Trigger: CTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACT...CTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp GAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCACACTTGATGGGCACCTaGCCCCCATCTGCATGGTAC +
Preference number: 5 (lower is better)
Translates to: ERAKLGCGIHWTLESHWAHLMGT*PPSAWY
Trigger: GTACCATGCAGATGGGGGCAAGGTGCCCATCAAGTG...TGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp TGGACCCTAGAGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTTCCAGCGCCATCCACTaGATGGGCACCTTGCCCCCA +
Preference number: 5 (lower is better)
Translates to: WTLESHWAGPQNPQRLPSSSAIH*MGTLPP
Trigger: TGGGGGCAAGGTGCCCATCAAGTGGATGGCGCTGGA...ACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACTCTAGGGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTCCCCTCTCAAGGCTTTGCAGCCCCTaGGCTGCCCCCATTCCCAGG +
Preference number: 5 (lower is better)
Translates to: LNGSLLFLDTPLGPLPLSRLCSP*AAPIPR
Trigger: CCTGGGAATGGGGGCAGCCAAGGGGCTGCAAAGCCT...TGAGAGGGGAAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CAA 90 bp CATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAGCCGTAGGTGTCCCTTaGAAGGTGCTGGGTGGAGCC +
Preference number: 5 (lower is better)
Translates to: HWAGPQNPQRLPSAVPLPAVGVP*KVLGGA
Trigger: GGCTCCACCCAGCACCTTCAAAGGGACACCTACGGC...TGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp AGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTGGGCCCTCCCACCTCTaGATGCCAGCAGAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: RIHKDSPVLFLFQRGWTPGPSHL*MPAEVR
Trigger: CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCC...AGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS TCA 90 bp CATGTCACTCTCATCACTGCCTGCGCAGGCATGGCTGCCAGGGTCTaGGTCTCTGTGCTGCACTGCGTTTGTCCTGGCCATTCTACTGGT +
Preference number: 5 (lower is better)
Translates to: HVTLITACAGMAARV*VSVLHCVCPGHSTG
Trigger: ACCAGTAGAATGGCCAGGACAAACGCAGTGCAGCACAGAGACTCAGACCCTGGCAGCCATGCCTGCGCAGGCAGTGATGAGAGTGACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406381.6
ENST00000578199.5
ENST00000584014.5
ENST00000584601.5
CDS TCA 90 bp GAGACAGGGTCAGGAGTGGGAGGGCCAGAGGGAGCTTTAGTGTACTaGGCCAGAGGTTCTGCTCAGGAGTCTAGCATCATGGCAGGTAGC +
Preference number: 5 (lower is better)
Translates to: ETGSGVGGPEGALVY*ARGSAQESSIMAGS
Trigger: GCTACCTGCCATGATGCTAGACTCCTGAGCAGAACCTCTGGCTCAGTACACTAAAGCTCCCTCTGGCCCTCCCACTCCTGACCCTGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583038.5
CDS GCA 90 bp CACAACAGTACATGTCACTCTCATCACTGCCTGCGCAGGCATGGCTaGCAGGGTCTGAGTCTCTGTGCTGCACTGCGTTTGTCCTGGCCA +
Preference number: 5 (lower is better)
Translates to: HNSTCHSHHCLRRHG*QGLSLCAALRLSWP
Trigger: TGGCCAGGACAAACGCAGTGCAGCACAGAGACTCAGACCCTGGCAGCCATGCCTGCGCAGGCAGTGATGAGAGTGACATGTACTGTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406381.6
ENST00000578199.5
ENST00000584014.5
ENST00000584601.5
CDS GCA 90 bp TCAGAGTTCTCCCATGGGCTAGACACCACTCCACCCAGCCTCCTCTaGTCCTTGGTCCTTCACCTAACCTTGCCCCCATCTGCATGGTAC +
Preference number: 5 (lower is better)
Translates to: SEFSHGLDTTPPSLL*SLVLHLTLPPSAWY
Trigger: GTACCATGCAGATGGGGGCAAGGTTAGGTGAAGGACCAAGGAGCAGAGGAGGCTGGGTGGAGTGGTGTCTAGCCCATGGGAGAACTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583038.5
CDS CCA 90 bp TTTGTGCTTCCCAAGGCCACCCAGCAGCAATTTTCGCCATGCTCCTaGGACAAACACCCTTGCTCTTCACCCAGTCTCTGTGGCCCCTCC +
Preference number: 5 (lower is better)
Translates to: FVLPKATQQQFSPCS*DKHPCSSPSLCGPS
Trigger: GGAGGGGCCACAGAGACTGGGTGAAGAGCAAGGGTGTTTGTCCCAGGAGCATGGCGAAAATTGCTGCTGGGTGGCCTTGGGAAGCACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578630.1
CDS-3UTR CAA 90 bp TCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCTTCAGCGGGTCTCCATaGTCTAGCACGGCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: SLGRASESTKTPQCCSSSFSGSP*SSTARA
Trigger: TGCCCTGGCCGTGCTAGACAATGGAGACCCGCTGAA...GGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCAGTGACAGGGGTGGTATaGTTCAGCGGGTCTCCATTG +
Preference number: 5 (lower is better)
Translates to: QRLPSAVPLPTRLDPFQPVTGVV*FSGSPL
Trigger: CAATGGAGACCCGCTGAACAATACCACCCCTGTCAC...TGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp TCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCCAGATGCCACTGTGGTaGAAGTGGAGGCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SLGRASESTKTPQCCSSSQMPLW*KWRQAR
Trigger: CCTGGCCTGCCTCCACTTCAACCACAGTGGCATCTG...GGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp TTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACTACCGGCCCTCGGGATaGGGCATGGACTCAAACGTG +
Preference number: 5 (lower is better)
Translates to: LGRASESTKTPQCCSSSNYRPSG*GMDSNV
Trigger: CACGTTTGAGTCCATGCCCAATCCCGAGGGCCGGTA...GTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCATACCGGCCCTCGGGATaGGGCATGGACTCAAACGTG +
Preference number: 5 (lower is better)
Translates to: HWAGPQNPQRLPSAVPLPYRPSG*GMDSNV
Trigger: CACGTTTGAGTCCATGCCCAATCCCGAGGGCCGGTA...TGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGCTCCCAAAGATCTTCTaGCAGCCAGCAAACTCCTGG +
Preference number: 5 (lower is better)
Translates to: PILPWGESLGPFQSGTSRLPKIF*QPANSW
Trigger: CCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAG...CCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp TGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGTGTGGAGCAGAGCTaGGTGCGGGTTCCGAAAGAG +
Preference number: 5 (lower is better)
Translates to: WAGPQNPQRLPSAVPLPTSVEQS*VRVPKE
Trigger: CTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACT...CGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp TCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAGGAACTGGCTGCAGTaGACACACTGGGTGGGCCCT +
Preference number: 5 (lower is better)
Translates to: SLGRASESTKTPQCCSSSRNWLQ*THWVGP
Trigger: AGGGCCCACCCAGTGTGTCAACTGCAGCCAGTTCCT...GGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGTTCTGCTGCCGTCGCTaGATGAGGATCCCAAAGACC +
Preference number: 5 (lower is better)
Translates to: PQRLPSAVPLPTRLDPFQFCCRR*MRIPKT
Trigger: GGTCTTTGGGATCCTCATCAAGCGACGGCAGCAGAA...CTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp ACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTCCCGCATCTGCGCCTGGTaGGGCATCGCTCCGCTAGGT +
Preference number: 5 (lower is better)
Translates to: TVSEWVAFVLRHSLRAASRICAW*GIAPLG
Trigger: ACCTAGCGGAGCGATGCCCAACCAGGCGCAGATGCG...GGAAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CAA 90 bp GGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCAGGCTCGTCTAAGATTTCTTaGTTGGCTTTGGGGGATGTG +
Preference number: 5 (lower is better)
Translates to: GERVLGLSRVAPAGRAAGSSKIS*LALGDV
Trigger: CACATCCCCCAAAGCCAACAAAGAAATCTTAGACGA...GCCTGCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp TTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAGGTTCCTAGGCTTTGCAGCCCCTaGGCTGCCCCCATTCCCAGG +
Preference number: 5 (lower is better)
Translates to: FQPSGNSSRKEGSLGQVPRLCSP*AAPIPR
Trigger: CCTGGGAATGGGGGCAGCCAAGGGGCTGCAAAGCCT...AGGAACCTGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCACCAGCAGGTCGGGCAGCCTGAATGGGTCGCTTTaGTTCTTAGACACTCCCTTA +
Preference number: 5 (lower is better)
Translates to: PWGESLGPFQSGTSRSGSLNGSL*FLDTPL
Trigger: TAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAG...GCTGCCCGACCTGCTGGTGCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS CCA 90 bp TGTCCACAACAGTACATGTCACTCTCATCACTGCCTGCGCAGGCATaGCTGCCAGGGTCTGAGTCTCTGTGCTGCACTGCGTTTGTCCTG +
Preference number: 5 (lower is better)
Translates to: CPQQYMSLSSLPAQA*LPGSESLCCTAFVL
Trigger: CAGGACAAACGCAGTGCAGCACAGAGACTCAGACCCTGGCAGCCATGCCTGCGCAGGCAGTGATGAGAGTGACATGTACTGTTGTGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406381.6
ENST00000578199.5
ENST00000584014.5
ENST00000584601.5
CDS CCA 90 bp TTTGAGGCTCCTAACATACTAGGGCTCCTGGGTCTACATACATCCTaGTCCCCTTTCATGCCCCTTGTGGGCTCCTCCACCCAGGACCTC +
Preference number: 5 (lower is better)
Translates to: FEAPNILGLLGLHTS*SPFMPLVGSSTQDL
Trigger: GAGGTCCTGGGTGGAGGAGCCCACAAGGGGCATGAAAGGGGACCAGGATGTATGTAGACCCAGGAGCCCTAGTATGTTAGGAGCCTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583038.5
CDS-3UTR CAA 90 bp CTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCTGGGACCTGCCTCACTaGGTTGTGAGCGATGAGCAC +
Preference number: 5 (lower is better)
Translates to: LRIHKDSPVLFLFQRGWTWDLPH*VVSDEH
Trigger: GTGCTCATCGCTCACAACCAAGTGAGGCAGGTCCCA...GGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CCATTGTGCAGAATTCGTCCCCGGATTACTTGCAGGTTCTGGAAGACGCTGAGGTTCAGCGGGTCTCCATaGTCTAGCACGGCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: PLCRIRPRITCRFWKTLRFSGSP*SSTARA
Trigger: TGCCCTGGCCGTGCTAGACAATGGAGACCCGCTGAA...CCTCAGCGTCTTCCAGAACCTGCAAGTAATCCGGGGACGAATTCTGCACAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CAA 90 bp CAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCAGCCAGCTGGTTGTTCTaGTGGAAGATGTCCTTCCAC +
Preference number: 5 (lower is better)
Translates to: QRLPSAVPLPTRLDPFQPASWLF*WKMSFH
Trigger: GTGGAAGGACATCTTCCACAAGAACAACCAGCTGGC...TGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCAGTGAGAGCCAGCTGGTaGTTCTTGTGGAAGATGTCC +
Preference number: 5 (lower is better)
Translates to: QRLPSAVPLPTRLDPFQPVRASW*FLWKMS
Trigger: GGACATCTTCCACAAGAACAACCAGCTGGCTCTCAC...TGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCGTGGGCAGTGGCCCCTaGCAGCGGGCACAGCCACCG +
Preference number: 5 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPVGSGP*QRAQPP
Trigger: CGGTGGCTGTGCCCGCTGCAAGGGGCCACTGCCCAC...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CAA 90 bp GGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTACTCGGGCACAGGGCTaGCTGCACTTCTCACACCGC +
Preference number: 5 (lower is better)
Translates to: GQSLNGSLLFLDTPLGPLTRAQG*LHFSHR
Trigger: GCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGT...AAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CAA 90 bp TCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCACTCGGGCACAGGGCTaGCTGCACTTCTCACACCGC +
Preference number: 5 (lower is better)
Translates to: SGTVSEWVAFVLRHSLRATRAQG*LHFSHR
Trigger: GCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGT...GGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CAA 90 bp GACCATAGCACACTCGGGCACAGGGCTTGCTGCACTTCTCACACCGCTGTGTTCCTCCCAAAGATCTTCTaGCAGCCAGCAAACTCCTGG +
Preference number: 5 (lower is better)
Translates to: DHSTLGHRACCTSHTAVFLPKIF*QPANSW
Trigger: CCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAG...GAACACAGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGTGTGCTATGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CAA 90 bp ATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACAGGAGTGGGTGCAGTaGATGGGGCAAGGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: IGQGLRIHKDSPVLFLFQQEWVQ*MGQGWH
Trigger: ATGCCAGCCTTGCCCCATCAACTGCACCCACTCCTG...TTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp TTTGACGACCCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCTTCTGCTGCCGTCGCTaGATGAGGATCCCAAAGACC +
Preference number: 5 (lower is better)
Translates to: FDDPILPWGESLGPFQSGFCCRR*MRIPKT
Trigger: GGTCTTTGGGATCCTCATCAAGCGACGGCAGCAGAA...GCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGGGTCGTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp ATGGCAGGTTCCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCTCGTCTAAGATTTCTTaGTTGGCTTTGGGGGATGTG +
Preference number: 5 (lower is better)
Translates to: MAGSPGSGRRALPPLDASSSKIS*LALGDV
Trigger: CACATCCCCCAAAGCCAACAAAGAAATCTTAGACGA...GCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGGAACCTGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp TTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACACATGGTTGGGACTCTaGACCAGCACGTTCCGAGCG +
Preference number: 5 (lower is better)
Translates to: LGRASESTKTPQCCSSSNTWLGL*TSTFRA
Trigger: CGCTCGGAACGTGCTGGTCAAGAGTCCCAACCATGT...GTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp GGACCCCTTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACACACTTGATGGGCACCTaGCCCCCATCTGCATGGTAC +
Preference number: 5 (lower is better)
Translates to: GPLPAIWELKQEGRFLRTHLMGT*PPSAWY
Trigger: GTACCATGCAGATGGGGGCAAGGTGCCCATCAAGTG...TGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp AGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCAGGGCTTCTGCGGACTaGGCCTTCTGGTTCACACTG +
Preference number: 5 (lower is better)
Translates to: SLIGQGLRIHKDSPVLFLRASAD*AFWFTL
Trigger: CAGTGTGAACCAGAAGGCCAAGTCCGCAGAAGCCCT...GAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp TCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAGGGCTTCTGCGGACTaGGCCTTCTGGTTCACACTG +
Preference number: 5 (lower is better)
Translates to: SLGRASESTKTPQCCSSSRASAD*AFWFTL
Trigger: CAGTGTGAACCAGAAGGCCAAGTCCGCAGAAGCCCT...GGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp GGACCCCTTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAAGGGCTTCTGCGGACTaGGCCTTCTGGTTCACACTG +
Preference number: 5 (lower is better)
Translates to: GPLPAIWELKQEGRFLRTRASAD*AFWFTL
Trigger: CAGTGTGAACCAGAAGGCCAAGTCCGCAGAAGCCCT...TGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCGCTCAGGGAGTAGCTTaGCATGTGGTCTTGAATATA +
Preference number: 5 (lower is better)
Translates to: PGSGRRALPPLDASRSQAAQGVA*HVVLNI
Trigger: TATATTCAAGACCACATGCAAAGCTACTCCCTGAGC...GGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584601.5
CDS-3UTR CAA 90 bp GGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCCTTCCCTGCTGCTCAGGGAGTAGCTTaGCATGTGGTCTTGAATATA +
Preference number: 5 (lower is better)
Translates to: GRRALPPLDASRSQAFPAAQGVA*HVVLNI
Trigger: TATATTCAAGACCACATGCAAAGCTACTCCCTGAGC...AGCAGGGAAGGCCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584601.5
CDS TCA 90 bp GCACAGGTGAGGCTCGCAGAACACCTGCTGGGTCAGTCTGTGCTCTaGATCCCAGCTCTCCCGCTTTCTAGTTCTGACATTGGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: AQVRLAEHLLGQSVL*IPALPLSSSDIGCF
Trigger: AAAGCAGCCAATGTCAGAACTAGAAAGCGGGAGAGCTGGGATTCAGAGCACAGACTGACCCAGCAGGTGTTCTGCGAGCCTCACCTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584888.1
CDS CCA 90 bp CATGGCTGCCAGGGTCTGAGTCTCTGTGCTGCACTGCGTTTGTCCTaGCCATTCTACTGGTGCCCCCGTTTTATCTGTGACTCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: HGCQGLSLCAALRLS*PFYWCPRFICDSLL
Trigger: GAGCAAAGAGTCACAGATAAAACGGGGGCACCAGTAGAATGGCCAGGACAAACGCAGTGCAGCACAGAGACTCAGACCCTGGCAGCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406381.6
ENST00000578199.5
ENST00000584014.5
ENST00000584601.5
CDS CCA 90 bp AAGGAAAGTCCTCCTTTCTGCAGAAAAGACCGTTGGACTCACGAGTaGGTGCAGTTGATGGGGCAAGGCTGGCATGCGCCCTCCTCATCT +
Preference number: 5 (lower is better)
Translates to: KESPPFCRKDRWTHE*VQLMGQGWHAPSSS
Trigger: AGATGAGGAGGGCGCATGCCAGCCTTGCCCCATCAACTGCACCCACTCGTGAGTCCAACGGTCTTTTCTGCAGAAAGGAGGACTTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578199.5
ENST00000582788.5
CDS-3UTR CAA 90 bp CTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCGTGACAGGGGTGGTATaGTTCAGCGGGTCTCCATTG +
Preference number: 5 (lower is better)
Translates to: LRIHKDSPVLFLFQRGWTVTGVV*FSGSPL
Trigger: CAATGGAGACCCGCTGAACAATACCACCCCTGTCAC...GGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp TGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGGTGAGAGCCAGCTGGTaGTTCTTGTGGAAGATGTCC +
Preference number: 5 (lower is better)
Translates to: WAGPQNPQRLPSAVPLPTVRASW*FLWKMS
Trigger: GGACATCTTCCACAAGAACAACCAGCTGGCTCTCAC...CGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp TCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCCTCTGCTGTCACCTCTaGGTTGTGCAGGGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: SGTVSEWVAFVLRHSLRALCCHL*VVQGAD
Trigger: GTCTGCCCCCTGCACAACCAAGAGGTGACAGCAGAG...GGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CAA 90 bp ATGCCAGGCTCCCAAAGATCTTCTTGCAGCCAGCAAACTCCTGGATATTGGCACCTCTGCTGTCACCTCTaGGTTGTGCAGGGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: MPGSQRSSCSQQTPGYWHLCCHL*VVQGAD
Trigger: GTCTGCCCCCTGCACAACCAAGAGGTGACAGCAGAG...GTGCCAATATCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAGCCTGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CAA 90 bp AAGATCTTCTTGCAGCCAGCAAACTCCTGGATATTGGCACTGGTAACTGCCCTCACTCGGGCACAGGGCTaGCTGCACTTCTCACACCGC +
Preference number: 5 (lower is better)
Translates to: KIFLQPANSWILALVTALTRAQG*LHFSHR
Trigger: GCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGT...GAGGGCAGTTACCAGTGCCAATATCCAGGAGTTTGCTGGCTGCAAGAAGATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000582648.5
CDS-3UTR CAA 90 bp AGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTCAGAGTCTCAAACACTaGGAGCTGCTCTGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: RIHKDSPVLFLFQRGWTPQSLKH*ELLWLE
Trigger: CTCCAGCCAGAGCAGCTCCAAGTGTTTGAGACTCTG...AGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCAGAGTCTCAAACACTaGGAGCTGCTCTGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: LRIHKDSPVLFLFQRGWTQSLKH*ELLWLE
Trigger: CTCCAGCCAGAGCAGCTCCAAGTGTTTGAGACTCTG...GGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATCTTTCGCATCTGCGCCTGGTaGGGCATCGCTCCGCTAGGT +
Preference number: 5 (lower is better)
Translates to: HLPPHTTPILPLGLYFIFRICAW*GIAPLG
Trigger: ACCTAGCGGAGCGATGCCCAACCAGGCGCAGATGCG...AAAGATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR CAA 90 bp GGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCAGGGCCTTTTCCCTCAACACTTaGATGGCCACTGGAATTTTC +
Preference number: 5 (lower is better)
Translates to: GQAGLWHPLDPRVSLGRAFSLNT*MATGIF
Trigger: GAAAATTCCAGTGGCCATCAAAGTGTTGAGGGAAAA...GGCCCTGCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGTTTTCCCTCAACACTTaGATGGCCACTGGAATTTTC +
Preference number: 5 (lower is better)
Translates to: PLEVVGGPSHLLMPAEVRFSLNT*MATGIF
Trigger: GAAAATTCCAGTGGCCATCAAAGTGTTGAGGGAAAA...CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTCCCCTCTCACACTTGATGGGCACCTaGCCCCCATCTGCATGGTAC +
Preference number: 5 (lower is better)
Translates to: LNGSLLFLDTPLGPLPLSHLMGT*PPSAWY
Trigger: GTACCATGCAGATGGGGGCAAGGTGCCCATCAAGTG...TGAGAGGGGAAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS CCA 90 bp TCAGGAGCACTAAGTCTTCCTGCCCGCTTCATTCCACTGATCCACTaGGCCTTTCAGGACATCACTTGCTCACTCGACTTGCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: SGALSLPARFIPLIH*AFQDITCSLDLLLE
Trigger: CTCCAGCAGCAAGTCGAGTGAGCAAGTGATGTCCTGAAAGGCCCAGTGGATCAGTGGAATGAAGCGGGCAGGAAGACTTAGTGCTCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584014.5
CDS-3UTR CAA 90 bp AGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCCTCCCAAAGATCTTCTaGCAGCCAGCAAACTCCTGG +
Preference number: 5 (lower is better)
Translates to: SLIGQGLRIHKDSPVLFLLPKIF*QPANSW
Trigger: CCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAG...GAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CCCACACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATAGTGTGGAGCAGAGCTaGGTGCGGGTTCCGAAAGAG +
Preference number: 5 (lower is better)
Translates to: PTLASPYNTHSPPGSLFHSVEQS*VRVPKE
Trigger: CTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACT...ATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR CAA 90 bp CAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGTTCCTTCCTTCGGCGGGGCAGCCCTaGTCATCCAGGTCCACACAG +
Preference number: 5 (lower is better)
Translates to: QKSTLYKAWILTPLLFLPSAGQP*SSRSTQ
Trigger: CTGTGTGGACCTGGATGACAAGGGCTGCCCCGCCGA...AGGAAGGAACAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CAA 90 bp CTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGGGTTTTCCCTCAACACTTaGATGGCCACTGGAATTTTC +
Preference number: 5 (lower is better)
Translates to: LPSAVPLPTRLDPFQPSGFSLNT*MATGIF
Trigger: GAAAATTCCAGTGGCCATCAAAGTGTTGAGGGAAAA...CCCAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp GGAAAGGGCCAAGCTGGGCTGTGGCATCCACTGGACCCTAGAGTCTCATTGGGCTCGTCTAAGATTTCTTaGTTGGCTTTGGGGGATGTG +
Preference number: 5 (lower is better)
Translates to: GKGQAGLWHPLDPRVSLGSSKIS*LALGDV
Trigger: CACATCCCCCAAAGCCAACAAAGAAATCTTAGACGA...GCCCAATGAGACTCTAGGGTCCAGTGGATGCCACAGCCCAGCTTGGCCCTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp GACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCCATCTGTCGTCTAAGATTTCTTaGTTGGCTTTGGGGGATGTG +
Preference number: 5 (lower is better)
Translates to: DSPVLFLFQRGWTPSSHLSSKIS*LALGDV
Trigger: CACATCCCCCAAAGCCAACAAAGAAATCTTAGACGA...CAGATGGCTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CCCACACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATACATGGTTGGGACTCTaGACCAGCACGTTCCGAGCG +
Preference number: 5 (lower is better)
Translates to: PTLASPYNTHSPPGSLFHTWLGL*TSTFRA
Trigger: CGCTCGGAACGTGCTGGTCAAGAGTCCCAACCATGT...ATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR CAA 90 bp TCTGTCTCGTCAATGTCCAGCAGCCGAGCCAGCCCGAAGTCTGTAATTTTGACAACATGGTTGGGACTCTaGACCAGCACGTTCCGAGCG +
Preference number: 5 (lower is better)
Translates to: SVSSMSSSRASPKSVILTTWLGL*TSTFRA
Trigger: CGCTCGGAACGTGCTGGTCAAGAGTCCCAACCATGT...TGTCAAAATTACAGACTTCGGGCTGGCTCGGCTGCTGGACATTGACGAGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CAA 90 bp GGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTAGGGCTTCTGCGGACTaGGCCTTCTGGTTCACACTG +
Preference number: 5 (lower is better)
Translates to: GQSLNGSLLFLDTPLGPLRASAD*AFWFTL
Trigger: CAGTGTGAACCAGAAGGCCAAGTCCGCAGAAGCCCT...AAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CAA 90 bp CCCCTGGAAGTGGTCGGAGGGCCCTCCCACCTCTTGATGCCAGCAGAAGTCAGGCTCATCATCTTCACATaGAGTAGGCATAAGCCAAAT +
Preference number: 5 (lower is better)
Translates to: PLEVVGGPSHLLMPAEVRLIIFT*SRHKPN
Trigger: ATTTGGCTTATGCCTACTCAATGTGAAGATGATGAG...CCTGACTTCTGCTGGCATCAAGAGGTGGGAGGGCCCTCCGACCACTTCCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584601.5
CDS-3UTR CAA 90 bp CACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATCTTTTTCAGCGGGTCTCCATaGTCTAGCACGGCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: HLPPHTTPILPLGLYFIFFSGSP*SSTARA
Trigger: TGCCCTGGCCGTGCTAGACAATGGAGACCCGCTGAA...AAAGATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR CAA 90 bp CTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTCCCCTCTCAGCCAGCTGGTTGTTCTaGTGGAAGATGTCCTTCCAC +
Preference number: 5 (lower is better)
Translates to: LNGSLLFLDTPLGPLPLSASWLF*WKMSFH
Trigger: GTGGAAGGACATCTTCCACAAGAACAACCAGCTGGC...TGAGAGGGGAAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CAA 90 bp ATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAAGCCAGCTGGTTGTTCTaGTGGAAGATGTCCTTCCAC +
Preference number: 5 (lower is better)
Translates to: IGQGLRIHKDSPVLFLFQASWLF*WKMSFH
Trigger: GTGGAAGGACATCTTCCACAAGAACAACCAGCTGGC...TTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGTTCCTTCCTACTCGGGCACAGGGCTaGCTGCACTTCTCACACCGC +
Preference number: 5 (lower is better)
Translates to: QKSTLYKAWILTPLLFLPTRAQG*LHFSHR
Trigger: GCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGT...AGGAAGGAACAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CAA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCGCTGATGCCCAGCCCTaGCAGGGTCAGCGAGTAGGC +
Preference number: 5 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPADAQP*QGQRVG
Trigger: GCCTACTCGCTGACCCTGCAAGGGCTGGGCATCAGC...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CAA 90 bp TTTCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCAGGAGTGGGTGCAGTaGATGGGGCAAGGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: FQGQSLNGSLLFLDTPLGQEWVQ*MGQGWH
Trigger: ATGCCAGCCTTGCCCCATCAACTGCACCCACTCCTG...CCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CAA 90 bp TTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAGGTTCCTTTCTGCTGCCGTCGCTaGATGAGGATCCCAAAGACC +
Preference number: 5 (lower is better)
Translates to: FQPSGNSSRKEGSLGQVPFCCRR*MRIPKT
Trigger: GGTCTTTGGGATCCTCATCAAGCGACGGCAGCAGAA...AGGAACCTGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp GTACTCTGGGTTCTCTGCCGTAGGTGTCCCTTTGAAGGTGCTGGGTGGAGCCCCTTTTCCCTCAACACTTaGATGGCCACTGGAATTTTC +
Preference number: 5 (lower is better)
Translates to: VLWVLCRRCPFEGAGWSPFSLNT*MATGIF
Trigger: GAAAATTCCAGTGGCCATCAAAGTGTTGAGGGAAAA...GGGGCTCCACCCAGCACCTTCAAAGGGACACCTACGGCAGAGAACCCAGAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp CCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTTCCAGCTGAATGGGTCGCTTTaGTTCTTAGACACTCCCTTA +
Preference number: 5 (lower is better)
Translates to: PQRLPSAVPLPTRLDPFQLNGSL*FLDTPL
Trigger: TAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAG...CTGGAAGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CAA 90 bp CCCACACTTGCCTCCCCATACAACACCCATTCTCCCCCTGGGTCTTTATTTCATGCCAGCTGGTTGTTCTaGTGGAAGATGTCCTTCCAC +
Preference number: 5 (lower is better)
Translates to: PTLASPYNTHSPPGSLFHASWLF*WKMSFH
Trigger: GTGGAAGGACATCTTCCACAAGAACAACCAGCTGGC...ATGAAATAAAGACCCAGGGGGAGAATGGGTGTTGTATGGGGAGGCAAGTGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
CDS-3UTR CAA 90 bp TTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAGGTTCCTGTGAGAGCCAGCTGGTaGTTCTTGTGGAAGATGTCC +
Preference number: 5 (lower is better)
Translates to: FQPSGNSSRKEGSLGQVPVRASW*FLWKMS
Trigger: GGACATCTTCCACAAGAACAACCAGCTGGCTCTCAC...AGGAACCTGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCGCTGTCACCTCTTGGTaGTGCAGGGGGCAGACGAGG +
Preference number: 5 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPAVTSW*CRGQTR
Trigger: CCTCGTCTGCCCCCTGCACAACCAAGAGGTGACAGC...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CAA 90 bp ACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCGCTTCCCTCCCAAAGATCTTCTaGCAGCCAGCAAACTCCTGG +
Preference number: 5 (lower is better)
Translates to: TVSEWVAFVLRHSLRAASLPKIF*QPANSW
Trigger: CCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAG...GGAAGCGGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CAA 90 bp GTCACCATCAAATACATCGGAGCCAGCCCCTTCGGAGGGTGCCAGTGGAGACCTTTTTCCCTCAACACTTaGATGGCCACTGGAATTTTC +
Preference number: 5 (lower is better)
Translates to: VTIKYIGASPFGGCQWRPFSLNT*MATGIF
Trigger: GAAAATTCCAGTGGCCATCAAAGTGTTGAGGGAAAA...AGGTCTCCACTGGCACCCTCCGAAGGGGCTGGCTCCGATGTATTTGATGGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578373.5
CDS-3UTR CAA 90 bp TTTGACGACCCCATTCTTCCCTGGGGAGAGAGTCTTGGGCCTTTCCAGAGTGGCTCGTCTAAGATTTCTTaGTTGGCTTTGGGGGATGTG +
Preference number: 5 (lower is better)
Translates to: FDDPILPWGESLGPFQSGSSKIS*LALGDV
Trigger: CACATCCCCCAAAGCCAACAAAGAAATCTTAGACGA...GCCACTCTGGAAAGGCCCAAGACTCTCTCCCCAGGGAAGAATGGGGTCGTCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000578373.5
ENST00000584450.5
CDS-3UTR CAA 90 bp AGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCCCTGGTGCACACTCACTTTaGTGCATGTCCACAACAGTA +
Preference number: 5 (lower is better)
Translates to: RIHKDSPVLFLFQRGWTPGAHSL*CMSTTV
Trigger: TACTGTTGTGGACATGCACAAAAGTGAGTGTGCACC...AGGGGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406381.6
CDS GCA 90 bp TCTCCTGGATTCTGGATTCCTTGTTTCAGGAGCACTAAGTCTTCCTaGCCGCTTCATTCCACTGATCCACTGGGCCTTTCAGGACATCAC +
Preference number: 5 (lower is better)
Translates to: SPGFWIPCFRSTKSS*PLHSTDPLGLSGHH
Trigger: GTGATGTCCTGAAAGGCCCAGTGGATCAGTGGAATGAAGCGGGCAGGAAGACTTAGTGCTCCTGAAACAAGGAATCCAGAATCCAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584014.5
CDS CCA 90 bp AGCATGTGGCCCCATTCCAGGGTCTGTGGACACGATCCAGCAGGTTaGTTTCCACTCTCCCTCCTGTTCATAACCTTTTCACAGACATTT +
Preference number: 5 (lower is better)
Translates to: SMWPHSRVCGHDPAG*FPLSLLFITFSQTF
Trigger: AAATGTCTGTGAAAAGGTTATGAACAGGAGGGAGAGTGGAAACCAACCTGCTGGATCGTGTCCACAGACCCTGGAATGGGGCCACATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583038.5
CDS-3UTR CAA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCAGGAACTGGCTGCAGTaGACACACTGGGTGGGCCCT +
Preference number: 5 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPRNWLQ*THWVGP
Trigger: AGGGCCCACCCAGTGTGTCAACTGCAGCCAGTTCCT...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CAA 90 bp AAAACTAAACAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGTCGGCGGGGCAGCCCTaGTCATCCAGGTCCACACAG +
Preference number: 5 (lower is better)
Translates to: KTKQKSTLYKAWILTPLLSAGQP*SSRSTQ
Trigger: CTGTGTGGACCTGGATGACAAGGGCTGCCCCGCCGA...CAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTGTTTAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CAA 90 bp TTTCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGTTCTGCTGCCGTCGCTaGATGAGGATCCCAAAGACC +
Preference number: 5 (lower is better)
Translates to: FQGQSLNGSLLFLDTPLGFCCRR*MRIPKT
Trigger: GGTCTTTGGGATCCTCATCAAGCGACGGCAGCAGAA...CCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CAA 90 bp AAAACTAAACAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGATGTGTGGGGAGGCTTaGCAGCCCCTTGGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: KTKQKSTLYKAWILTPLLMCGEA*QPLGCP
Trigger: GGGGCAGCCAAGGGGCTGCAAAGCCTCCCCACACAT...CAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTGTTTAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS GCA 90 bp ATGTCCCTTGCACACTGCAGGTTTAACAGCAGGAGAAAGCTTGCGTaGTTGGGAAGTAGAGGGATTTCAGGGGAAAGGCTTCTTCTGACT +
Preference number: 5 (lower is better)
Translates to: MSLAHCRFNSRRKLA*LGSRGISGERLLLT
Trigger: AGTCAGAAGAAGCCTTTCCCCTGAAATCCCTCTACTTCCCAAGCACGCAAGCTTTCTCCTGCTGTTAAACCTGCAGTGTGCAAGGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584099.1
CDS CCA 90 bp CCAAACATAAGATGGAGATGTCACTCTAGAGGGGCTTCTCACAGGTaGAGGGCAGGGAAGGAATCTCTTTCCAGATCATTCCATCACCCA +
Preference number: 5 (lower is better)
Translates to: PNIRWRCHSRGASHR*RAGKESLSRSFHHP
Trigger: TGGGTGATGGAATGATCTGGAAAGAGATTCCTTCCCTGCCCTCCACCTGTGAGAAGCCCCTCTAGAGTGACATCTCCATCTTATGTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578709.5
CDS-3UTR CAA 90 bp AAAACTAAACAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGGCTGTCACCTCTTGGTaGTGCAGGGGGCAGACGAGG +
Preference number: 5 (lower is better)
Translates to: KTKQKSTLYKAWILTPLLAVTSW*CRGQTR
Trigger: CCTCGTCTGCCCCCTGCACAACCAAGAGGTGACAGC...CAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTGTTTAGTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CAA 90 bp TTTCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCTCCCAAAGATCTTCTaGCAGCCAGCAAACTCCTGG +
Preference number: 5 (lower is better)
Translates to: FQGQSLNGSLLFLDTPLGLPKIF*QPANSW
Trigger: CCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAG...CCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CAA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCAGTGTGGAGCAGAGCTaGGTGCGGGTTCCGAAAGAG +
Preference number: 5 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPSVEQS*VRVPKE
Trigger: CTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACT...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CAA 90 bp AAAACTAAACAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGTCGTCCTCTGGCCGGTaGGCAGTGTGGAGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: KTKQKSTLYKAWILTPLLSSSGR*AVWSRA
Trigger: AGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGA...CAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTGTTTAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CAA 90 bp CTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCTTTTCCCTCAACACTTaGATGGCCACTGGAATTTTC +
Preference number: 5 (lower is better)
Translates to: LRIHKDSPVLFLFQRGWTFSLNT*MATGIF
Trigger: GAAAATTCCAGTGGCCATCAAAGTGTTGAGGGAAAA...GGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
ENST00000584601.5
CDS-3UTR CAA 90 bp TTTCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCAACTCCCGGAATCTaGGCCGACATTCAGAGTCAA +
Preference number: 5 (lower is better)
Translates to: FQGQSLNGSLLFLDTPLGPTPGI*ADIQSQ
Trigger: TTGACTCTGAATGTCGGCCAAGATTCCGGGAGTTGG...CCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CAA 90 bp ATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACTGAATGGGTCGCTTTaGTTCTTAGACACTCCCTTA +
Preference number: 5 (lower is better)
Translates to: IGQGLRIHKDSPVLFLFQLNGSL*FLDTPL
Trigger: TAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAG...TTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CAA 90 bp GGACCCCTTCCAGCCATCTGGGAACTCAAGCAGGAAGGAAGGTTCCTTAGGACAGCTTTGCATGTGGTCTaGAATATAGCTTTGCTTTGC +
Preference number: 5 (lower is better)
Translates to: GPLPAIWELKQEGRFLRTALHVV*NIALLC
Trigger: GCAAAGCAAAGCTATATTCAAGACCACATGCAAAGC...TGTCCTAAGGAACCTTCCTTCCTGCTTGAGTTCCCAGATGGCTGGAAGGGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584601.5
CDS-3UTR CAA 90 bp CAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGTTCCTTCCTGCCAGCTGGTTGTTCTaGTGGAAGATGTCCTTCCAC +
Preference number: 5 (lower is better)
Translates to: QKSTLYKAWILTPLLFLPASWLF*WKMSFH
Trigger: GTGGAAGGACATCTTCCACAAGAACAACCAGCTGGC...AGGAAGGAACAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CAA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGACTCGGGCACAGGGCTaGCTGCACTTCTCACACCGC +
Preference number: 5 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKTRAQG*LHFSHR
Trigger: GCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGT...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CAA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCCAGAGTCTCAAACACTaGGAGCTGCTCTGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPQSLKH*ELLWLE
Trigger: CTCCAGCCAGAGCAGCTCCAAGTGTTTGAGACTCTG...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CAA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGTCGTCCTCTGGCCGGTaGGCAGTGTGGAGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKSSSGR*AVWSRA
Trigger: AGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGA...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CAA 90 bp AAAACTAAACAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGAGGAACTGGCTGCAGTaGACACACTGGGTGGGCCCT +
Preference number: 5 (lower is better)
Translates to: KTKQKSTLYKAWILTPLLRNWLQ*THWVGP
Trigger: AGGGCCCACCCAGTGTGTCAACTGCAGCCAGTTCCT...CAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTGTTTAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CAA 90 bp TCAGGGACAGTCTCTGAATGGGTCGCTTTTGTTCTTAGACACTCCCTTAGGGCCCCTGAAATAGAAGAGTaGGACAGAATGGTTCCTGGT +
Preference number: 5 (lower is better)
Translates to: SGTVSEWVAFVLRHSLRAPEIEE*DRMVPG
Trigger: ACCAGGAACCATTCTGTCCAACTCTTCTATTTCAGG...GGCCCTAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAGAGACTGTCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406381.6
CDS-3UTR CAA 90 bp AGTCTCATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCGAATATAGCTTTGCTTaGCCACCTGAAATAGAAGAG +
Preference number: 5 (lower is better)
Translates to: SLIGQGLRIHKDSPVLFLEYSFA*PPEIEE
Trigger: CTCTTCTATTTCAGGTGGCAAAGCAAAGCTATATTC...GAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAATGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406381.6
CDS-3UTR CAA 90 bp ATTGGGCAGGGCCTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAAGCTTTGCATGTGGTCTaGAATATAGCTTTGCTTTGC +
Preference number: 5 (lower is better)
Translates to: IGQGLRIHKDSPVLFLFQALHVV*NIALLC
Trigger: GCAAAGCAAAGCTATATTCAAGACCACATGCAAAGC...TTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAGGCCCTGCCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584601.5
CDS-3UTR CAA 90 bp CTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCGAATATAGCTTTGCTTaGCCACCATTCATTAAGTGG +
Preference number: 5 (lower is better)
Translates to: LRIHKDSPVLFLFQRGWTEYSFA*PPFIKW
Trigger: CCACTTAATGAATGGTGGCAAAGCAAAGCTATATTC...GGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584601.5
CDS GCA 90 bp TGTCCTGGCCATTCTACTGGTGCCCCCGTTTTATCTGTGACTCTTTaGTCAGGGAGTAGCTTTGCATGTGGTCTTGAATATAGCTTTGCT +
Preference number: 5 (lower is better)
Translates to: CPGHSTGAPVLSVTL*SGSSFACGLEYSFA
Trigger: AGCAAAGCTATATTCAAGACCACATGCAAAGCTACTCCCTGAGCAAAGAGTCACAGATAAAACGGGGGCACCAGTAGAATGGCCAGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406381.6
ENST00000578199.5
ENST00000584014.5
ENST00000584601.5
CDS-3UTR CAA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGTTCAGCGGGTCTCCATaGTCTAGCACGGCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKFSGSP*SSTARA
Trigger: TGCCCTGGCCGTGCTAGACAATGGAGACCCGCTGAA...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CAA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCGCCAGCTGGTTGTTCTaGTGGAAGATGTCCTTCCAC +
Preference number: 5 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPASWLF*WKMSFH
Trigger: GTGGAAGGACATCTTCCACAAGAACAACCAGCTGGC...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CAA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGCAGATGCCACTGTGGTaGAAGTGGAGGCAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKQMPLW*KWRQAR
Trigger: CCTGGCCTGCCTCCACTTCAACCACAGTGGCATCTG...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CAA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGTACCGGCCCTCGGGATaGGGCATGGACTCAAACGTG +
Preference number: 5 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKYRPSG*GMDSNV
Trigger: CACGTTTGAGTCCATGCCCAATCCCGAGGGCCGGTA...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CAA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGCTCTGCTGTCACCTCTaGGTTGTGCAGGGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKLCCHL*VVQGAD
Trigger: GTCTGCCCCCTGCACAACCAAGAGGTGACAGCAGAG...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CAA 90 bp CTCAGAATCCACAAAGACTCCCCAGTGCTGTTCCTCTTCCAACGAGGCTGGACCGTCTTGAATATAGCTTaGCTTTGCCACCATTCATTA +
Preference number: 5 (lower is better)
Translates to: LRIHKDSPVLFLFQRGWTVLNIA*LCHHSL
Trigger: TAATGAATGGTGGCAAAGCAAAGCTATATTCAAGAC...GGTCCAGCCTCGTTGGAAGAGGAACAGCACTGGGGAGTCTTTGTGGATTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584601.5
CDS-3UTR CAA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGCACGAGTGGGTGCAGTaGATGGGGCAAGGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKHEWVQ*MGQGWH
Trigger: ATGCCAGCCTTGCCCCATCAACTGCACCCACTCGTG...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CAA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGGTGACAGGGGTGGTATaGTTCAGCGGGTCTCCATTG +
Preference number: 5 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKVTGVV*FSGSPL
Trigger: CAATGGAGACCCGCTGAACAATACCACCCCTGTCAC...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CAA 90 bp CAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGTTCCTTCCTTCGTCTAAGATTTCTTaGTTGGCTTTGGGGGATGTG +
Preference number: 5 (lower is better)
Translates to: QKSTLYKAWILTPLLFLPSSKIS*LALGDV
Trigger: CACATCCCCCAAAGCCAACAAAGAAATCTTAGACGA...AGGAAGGAACAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CAA 90 bp CAGAAAAGCACTCTGTACAAAGCCTGGATACTGACACCATTGCTGTTCCTTCCTCTGAATGGGTCGCTTTaGTTCTTAGACACTCCCTTA +
Preference number: 5 (lower is better)
Translates to: QKSTLYKAWILTPLLFLPLNGSL*FLDTPL
Trigger: TAAGGGAGTGTCTAAGAACAAAAGCGACCCATTCAG...AGGAAGGAACAGCAATGGTGTCAGTATCCAGGCTTTGTACAGAGTGCTTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578373.5
CDS-3UTR CAA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGTGTGCTGCACTGCGTTaGTCCTGGCCATTCTACTGG +
Preference number: 5 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKCAALR*SWPFYW
Trigger: CCAGTAGAATGGCCAGGACAAACGCAGTGCAGCACA...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CAA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGCTGCAGAAAAGACCGTaGGACTCACGAGTGGGTGCA +
Preference number: 5 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKLQKRP*DSRVGA
Trigger: TGCACCCACTCGTGAGTCCAACGGTCTTTTCTGCAG...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CAA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGGTGAGAGCCAGCTGGTaGTTCTTGTGGAAGATGTCC +
Preference number: 5 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKVRASW*FLWKMS
Trigger: GGACATCTTCCACAAGAACAACCAGCTGGCTCTCAC...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CAA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGCTCCCAAAGATCTTCTaGCAGCCAGCAAACTCCTGG +
Preference number: 5 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKLPKIF*QPANSW
Trigger: CCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAG...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CAA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCGCTCAGGGAGTAGCTTaGCATGTGGTCTTGAATATA +
Preference number: 5 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPAQGVA*HVVLNI
Trigger: TATATTCAAGACCACATGCAAAGCTACTCCCTGAGC...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS CCA 90 bp TTGGTCCAAGGAAGAGGAGACGAGGAACCATTCATTAAGTGGAAGTaGATCATCACAAAGGTTTTCATCCTCATCATCTTCACATTGAGT +
Preference number: 5 (lower is better)
Translates to: LVQGRGDEEPFIKWK*IITKVFILIIFTLS
Trigger: ACTCAATGTGAAGATGATGAGGATGAAAACCTTTGTGATGATCCACTTCCACTTAATGAATGGTTCCTCGTCTCCTCTTCCTTGGACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584014.5
CDS-3UTR CAA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGGGTGCACACTCACTTTaGTGCATGTCCACAACAGTA +
Preference number: 5 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKGAHSL*CMSTTV
Trigger: TACTGTTGTGGACATGCACAAAAGTGAGTGTGCACC...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CAA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCCTCATCATCTTCACATaGAGTAGGCATAAGCCAAAT +
Preference number: 5 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPLIIFT*SRHKPN
Trigger: ATTTGGCTTATGCCTACTCAATGTGAAGATGATGAG...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CAA 90 bp CAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGAGCCCCGAATATAGCTTTGCTTaGCCACCATTCATTAAGTGG +
Preference number: 5 (lower is better)
Translates to: QKQDMTKGELVPFYSKSPEYSFA*PPFIKW
Trigger: CCACTTAATGAATGGTGGCAAAGCAAAGCTATATTC...GGGGCTCTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS CCA 90 bp GCATGTGGTCTTGAATATAGCTTTGCTTTGCCACCATTCATTAAGTaGAAGTGGATCATCACAAAGGTTTTCATCCTCATCATCTTCACA +
Preference number: 5 (lower is better)
Translates to: ACGLEYSFALPPFIK*KWIITKVFILIIFT
Trigger: TGTGAAGATGATGAGGATGAAAACCTTTGTGATGATCCACTTCCACTTAATGAATGGTGGCAAAGCAAAGCTATATTCAAGACCACATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578199.5
ENST00000584601.5
CDS-3UTR CAA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGGCTTTGCATGTGGTCTaGAATATAGCTTTGCTTTGC +
Preference number: 5 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKALHVV*NIALLC
Trigger: GCAAAGCAAAGCTATATTCAAGACCACATGCAAAGC...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS-3UTR CAA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGATGACAAAGGGAGAGTaGGTCCCCTTTTATAGTAAG +
Preference number: 5 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKMTKGE*VPFYSK
Trigger: CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCAT...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS CCA 90 bp GGTCTTGAATATAGCTTTGCTTTGCCACCATTCATTAAGTGGAAGTaGATCATCACAAAGGTTTTCATCCTCATCATCTTCACATTGAGT +
Preference number: 5 (lower is better)
Translates to: GLEYSFALPPFIKWK*IITKVFILIIFTLS
Trigger: ACTCAATGTGAAGATGATGAGGATGAAAACCTTTGTGATGATCCACTTCCACTTAATGAATGGTGGCAAAGCAAAGCTATATTCAAGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578199.5
ENST00000584601.5
CDS-3UTR CAA 90 bp TGTCATCAGAAACAAGATATGACAAAGGGAGAGTTGGTCCCCTTTTATAGTAAGGTCTTGAATATAGCTTaGCTTTGCCACCATTCATTA +
Preference number: 5 (lower is better)
Translates to: CHQKQDMTKGELVPFYSKVLNIA*LCHHSL
Trigger: TAATGAATGGTGGCAAAGCAAAGCTATATTCAAGAC...CTTACTATAAAAGGGGACCAACTCTCCCTTTGTCATATCTTGTTTCTGATGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578199.5
CDS CAA 90 bp CCGGCGGCGAGCCAGGGAGAAAGGATGGCCGGCCTGGCGGCGCGGTaGGTCCTGCTAGCTGGGGCAGCGGCGCTGGCGAGCGGCTCCCAG +
Preference number: 6 (lower is better)
Translates to: PAASQGERMAGLAAR*VLLAGAAALASGSQ
Trigger: CTGGGAGCCGCTCGCCAGCGCCGCTGCCCCAGCTAGCAGGACCAACCGCGCCGCCAGGCCGGCCATCCTTTCTCCCTGGCTCGCCGCCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584601.5
CDS GCA 72 bp CCCTCCAGCCACCCTCTCCTCCGCCCCTCATACCCCTaGAGTACTCGGCATTCCTCCACGCACTCCTGGCCC +
Preference number: 6 (lower is better)
Translates to: PSSHPLLRPSYP*STRHSSTHSWP
Trigger: GGGCCAGGAGTGCGTGGAGGAATGCCGAGTACTGCAGGGGTATGAGGGGCGGAGGAGAGGGTGGCTGGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582788.5
ENST00000583038.5
CDS TCA 72 bp GGGCATCGAGATCGAGTCGCGCCTCGGGGGCACAGGTaGGGCTCGCAGAACACCTGCTGGGTCAGTCTGTGC +
Preference number: 6 (lower is better)
Translates to: GHRDRVAPRGHR*GSQNTCWVSLC
Trigger: GCACAGACTGACCCAGCAGGTGTTCTGCGAGCCTCACCTGTGCCCCCGAGGCGCGACTCGATCTCGATGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584888.1
CDS CCA 72 bp GCAGCAGGCAGAGGGCCCTCTCGGGGCGAAGGGGGCTaGGGCCGAACATCTGGCTGGTTCACATATTCCTGG +
Preference number: 6 (lower is better)
Translates to: AAGRGPSRGEGG*GRTSGWFTYSW
Trigger: CCAGGAATATGTGAACCAGCCAGATGTTCGGCCCCAGCCCCCTTCGCCCCGAGAGGGCCCTCTGCCTGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584450.5
CDS TCA 72 bp CAGAGGGACAGGAACTGCAGCTGGCCTCGGGGGCAGTaGGTGGGTACCTCGGGCACAGGGCTTGCTGCACTT +
Preference number: 6 (lower is better)
Translates to: QRDRNCSWPRGQ*VGTSGTGLAAL
Trigger: AAGTGCAGCAAGCCCTGTGCCCGAGGTACCCACTCACTGCCCCCGAGGCCAGCTGCAGTTCCTGTCCCTCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584908.5
CDS GCA 72 bp AGGGTACATCCTGGGGTCCAGGCCAACCTGGCTCTCTaGTCGGCGGGGCAGCCCTTGTCATCCAGGTCCACA +
Preference number: 6 (lower is better)
Translates to: RVHPGVQANLAL*SAGQPLSSRST
Trigger: TGTGGACCTGGATGACAAGGGCTGCCCCGCCGAGCAGAGAGCCAGGTTGGCCTGGACCCCAGGATGTACCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584684.1
CDS CCA 72 bp GGGACAGGAACTGCAGCTGGCCTCGGGGGCAGTGAGTaGGTACCTCGGGCACAGGGCTTGCTGCACTTCTCA +
Preference number: 6 (lower is better)
Translates to: GTGTAAGLGGSE*VPRAQGLLHFS
Trigger: TGAGAAGTGCAGCAAGCCCTGTGCCCGAGGTACCCACTCACTGCCCCCGAGGCCAGCTGCAGTTCCTGTCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584908.5
CDS CAA 90 bp GCAGCTGGCCTCGGGGGCAGTGAGTGGGTACCTCGGGCACAGGGCTaGCTGCACTTCTCACACCGCTGTGTTCCATCCTCTGCTGTCACC +
Preference number: 6 (lower is better)
Translates to: AAGLGGSEWVPRAQG*LHFSHRCVPSSAVT
Trigger: GGTGACAGCAGAGGATGGAACACAGCGGTGTGAGAAGTGCAGCAAGCCCTGTGCCCGAGGTACCCACTCACTGCCCCCGAGGCCAGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584908.5
CDS TCA 72 bp ACCGCCGGCGGAGAATGGACTCCAGCGCCATCCACTTaGTGGGCACCTGGGAGGGCAGAAGAGGAAGTCCTC +
Preference number: 6 (lower is better)
Translates to: TAGGEWTPAPST*WAPGRAEEEVL
Trigger: GAGGACTTCCTCTTCTGCCCTCCCAGGTGCCCATCAAGTGGATGGCGCTGGAGTCCATTCTCCGCCGGCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583038.5
CDS GCA 72 bp GACTGGCAGGGAGCCGCAGCTTCATGTCTGTGCCGGTaGACACTTGTGGCTTCCAGGACCCCCGGGGCATAT +
Preference number: 6 (lower is better)
Translates to: DWQGAAASCLCR*TLVASRTPGAY
Trigger: ATATGCCCCGGGGGTCCTGGAAGCCACAAGTGTGCACCGGCACAGACATGAAGCTGCGGCTCCCTGCCAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584601.5
CDS GCA 72 bp TGGCTGGTTCACATATTCCTGGTAGATGAGCTGCGGTaGCTGTGGTGGACCATGCCCCCAGCGCCCGGGGCA +
Preference number: 6 (lower is better)
Translates to: WLVHIFLVDELR*LWWTMPPAPGA
Trigger: TGCCCCGGGCGCTGGGGGCATGGTCCACCACAGGCACCGCAGCTCATCTACCAGGAATATGTGAACCAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584450.5
CDS CCA 72 bp GCACACTGGGCTCCCTGTCTTACCACACTCGTCCTCTaGCCGGTTGGCAGTGTGGAGCAGAGCTTGGTGCGG +
Preference number: 6 (lower is better)
Translates to: AHWAPCLTTLVL*PVGSVEQSLVR
Trigger: CCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGAGTGTGGTAAGACAGGGAGCCCAGTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582788.5
ENST00000583038.5
CDS CCA 72 bp GTTCACATATTCCTGGTAGATGAGCTGCGGTGCCTGTaGTGGACCATGCCCCCAGCGCCCGGGGCAGGGTCT +
Preference number: 6 (lower is better)
Translates to: VHIFLVDELRCL*WTMPPAPGAGS
Trigger: AGACCCTGCCCCGGGCGCTGGGGGCATGGTCCACCACAGGCACCGCAGCTCATCTACCAGGAATATGTGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584450.5
CDS CAA 90 bp CTTACCACACTCGTCCTCTGGCCGGTTGGCAGTGTGGAGCAGAGCTaGGTGCGGGTTCCGAAAGAGCTGGTCCCAGGGCACCGTGTGCAC +
Preference number: 6 (lower is better)
Translates to: LTTLVLWPVGSVEQS*VRVPKELVPGHRVH
Trigger: GTGCACACGGTGCCCTGGGACCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGAGTGTGGTAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582788.5
ENST00000583038.5
CDS CAA 90 bp TGGTGGGTGAACCGCCGGCGGAGAATGGACTCCAGCGCCATCCACTaGATGGGCACCTGGGAGGGCAGAAGAGGAAGTCCTCCAACTGTG +
Preference number: 6 (lower is better)
Translates to: WWVNRRRRMDSSAIH*MGTWEGRRGSPPTV
Trigger: CACAGTTGGAGGACTTCCTCTTCTGCCCTCCCAGGTGCCCATCAAGTGGATGGCGCTGGAGTCCATTCTCCGCCGGCGGTTCACCCACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583038.5
CDS TCA 72 bp GCTTCGAGGCGACCTACCTGGAGCTGGCCAGTGCTGTaGAGGAGCAGTATCCGGGCATCGAGATCGAGTCGC +
Preference number: 6 (lower is better)
Translates to: ASRRPTWSWPVL*RSSIRASRSSR
Trigger: GCGACTCGATCTCGATGCCCGGATACTGCTCCTTCACAGCACTGGCCAGCTCCAGGTAGGTCGCCTCGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584888.1
CDS GCA 72 bp GCGCAGGCATGGCTGCCAGGGTCTGAGTCTCTGTGCTaGACTGCGTTTGTCCTGGCCATTCTACTGGTGCCC +
Preference number: 6 (lower is better)
Translates to: AQAWLPGSESLC*TAFVLAILLVP
Trigger: GGGCACCAGTAGAATGGCCAGGACAAACGCAGTGCAGCACAGAGACTCAGACCCTGGCAGCCATGCCTGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406381.6
ENST00000578199.5
ENST00000584014.5
ENST00000584601.5
CDS TCA 72 bp CTCATCACTGCCTGCGCAGGCATGGCTGCCAGGGTCTaGGTCTCTGTGCTGCACTGCGTTTGTCCTGGCCAT +
Preference number: 6 (lower is better)
Translates to: LITACAGMAARV*VSVLHCVCPGH
Trigger: ATGGCCAGGACAAACGCAGTGCAGCACAGAGACTCAGACCCTGGCAGCCATGCCTGCGCAGGCAGTGATGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000406381.6
ENST00000578199.5
ENST00000584014.5
ENST00000584601.5
CDS TCA 72 bp TCTCAGCCTTCATACCGGGACAGGTCAACAGCCACATaGGCATCAGGGTCCGGGCCCCTCCCCACACTGACA +
Preference number: 6 (lower is better)
Translates to: SQPSYRDRSTAT*ASGSGPLPTLT
Trigger: TGTCAGTGTGGGGAGGGGCCCGGACCCTGATGCTCATGTGGCTGTTGACCTGTCCCGGTATGAAGGCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584908.5
CDS TCA 72 bp CCTACAGCAGTGACCACCCAGCATCCAGTGGGGGAGTaGAGGGCAATGAAGGGTACATCCTGGGGTCCAGGC +
Preference number: 6 (lower is better)
Translates to: PTAVTTQHPVGE*RAMKGTSWGPG
Trigger: GCCTGGACCCCAGGATGTACCCTTCATTGCCCTTCACTCCCCCACTGGATGCTGGGTGGTCACTGCTGTAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584684.1
CDS TCA 72 bp GGCATGAGCCATCGCACCCGGCCGGCGTCTGCAATTTaGCAAACCAAGCATGTGGCCCCATTCCAGGGTCTG +
Preference number: 6 (lower is better)
Translates to: GMSHRTRPASAI*QTKHVAPFQGL
Trigger: CAGACCCTGGAATGGGGCCACATGCTTGGTTTGTCAAATTGCAGACGCCGGCCGGGTGCGATGGCTCATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583038.5
CDS TCA 72 bp TGTCTGTGCCGGTGCACACTCAGACAGGGAGAAGCCTaGCTGAAGGACCCCTCCGCCCATGTCCCTTGCACA +
Preference number: 6 (lower is better)
Translates to: CLCRCTLRQGEA*LKDPSAHVPCT
Trigger: TGTGCAAGGGACATGGGCGGAGGGGTCCTTCAGTCAGGCTTCTCCCTGTCTGAGTGTGCACCGGCACAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584099.1
CDS CCA 72 bp GTCTTACCACACTCGTCCTCTGGCCGGTTGGCAGTGTaGAGCAGAGCTTGGTGCGGGTTCCGAAAGAGCTGG +
Preference number: 6 (lower is better)
Translates to: VLPHSSSGRLAV*SRAWCGFRKSW
Trigger: CCAGCTCTTTCGGAACCCGCACCAAGCTCTGCTCCACACTGCCAACCGGCCAGAGGACGAGTGTGGTAAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582788.5
ENST00000583038.5
CDS CAA 72 bp TGGGTCTACATACATCCTGGTCCCCTTTCATGCCCCTaGTGGGCTCCTCCACCCAGGACCTCCCACCCTCCT +
Preference number: 6 (lower is better)
Translates to: WVYIHPGPLSCP*WAPPPRTSHPP
Trigger: AGGAGGGTGGGAGGTCCTGGGTGGAGGAGCCCACAAGGGGCATGAAAGGGGACCAGGATGTATGTAGACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583038.5
CDS TCA 72 bp GCAGAAAAGACCGTTGGACTCACGAGTGGGTGCAGTTaGTGGGGCAAGGCTGGCATGCGCCCTCCTCATCTG +
Preference number: 6 (lower is better)
Translates to: AEKTVGLTSGCS*WGKAGMRPPHL
Trigger: CAGATGAGGAGGGCGCATGCCAGCCTTGCCCCATCAACTGCACCCACTCGTGAGTCCAACGGTCTTTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578199.5
ENST00000582788.5
CDS TCA 72 bp TCTGCAGTGGGACCTGCCTCACTTGGTTGTGAGCGATaGGCACGTAGCCCTGCACCTCCTGGATATCCTGGG +
Preference number: 6 (lower is better)
Translates to: SAVGPASLGCER*ARSPAPPGYPG
Trigger: CCCAGGATATCCAGGAGGTGCAGGGCTACGTGCTCATCGCTCACAACCAAGTGAGGCAGGTCCCACTGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583038.5
CDS GCA 72 bp GGTGTGGAGGGACTGGGTTTCCTAGCCATCTTTCCTTaGAGTCCCCTCCCCTCAGCATCTGAGCAGGTCCTC +
Preference number: 6 (lower is better)
Translates to: GVEGLGFLAIFP*SPLPSASEQVL
Trigger: GAGGACCTGCTCAGATGCTGAGGGGAGGGGACTGCAAGGAAAGATGGCTAGGAAACCCAGTCCCTCCACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584684.1
CDS GCA 72 bp TCCCATGGGCTAGACACCACTCCACCCAGCCTCCTCTaGTCCTTGGTCCTTCACCTAACCTTGCCCCCATCT +
Preference number: 6 (lower is better)
Translates to: SHGLDTTPPSLL*SLVLHLTLPPS
Trigger: AGATGGGGGCAAGGTTAGGTGAAGGACCAAGGAGCAGAGGAGGCTGGGTGGAGTGGTGTCTAGCCCATGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583038.5
CDS CCA 72 bp CCTCCTTTCTGCAGAAAAGACCGTTGGACTCACGAGTaGGTGCAGTTGATGGGGCAAGGCTGGCATGCGCCC +
Preference number: 6 (lower is better)
Translates to: PPFCRKDRWTHE*VQLMGQGWHAP
Trigger: GGGCGCATGCCAGCCTTGCCCCATCAACTGCACCCACTCGTGAGTCCAACGGTCTTTTCTGCAGAAAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578199.5
ENST00000582788.5
CDS CCA 72 bp CCCGGCCGGCGTCTGCAATTTGACAAACCAAGCATGTaGCCCCATTCCAGGGTCTGTGGACACGATCCAGCA +
Preference number: 6 (lower is better)
Translates to: PGRRLQFDKPSM*PHSRVCGHDPA
Trigger: TGCTGGATCGTGTCCACAGACCCTGGAATGGGGCCACATGCTTGGTTTGTCAAATTGCAGACGCCGGCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583038.5
CDS CAA 72 bp GCAGCAATTTTCGCCATGCTCCTGGGACAAACACCCTaGCTCTTCACCCAGTCTCTGTGGCCCCTCCCTCGG +
Preference number: 6 (lower is better)
Translates to: AAIFAMLLGQTP*LFTQSLWPLPR
Trigger: CCGAGGGAGGGGCCACAGAGACTGGGTGAAGAGCAAGGGTGTTTGTCCCAGGAGCATGGCGAAAATTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578630.1
CDS CAA 72 bp AGGCATGAGCCATCGCACCCGGCCGGCGTCTGCAATTaGACAAACCAAGCATGTGGCCCCATTCCAGGGTCT +
Preference number: 6 (lower is better)
Translates to: RHEPSHPAGVCN*TNQACGPIPGS
Trigger: AGACCCTGGAATGGGGCCACATGCTTGGTTTGTCAAATTGCAGACGCCGGCCGGGTGCGATGGCTCATGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583038.5
CDS CAA 90 bp CGCAGGCATGGCTGCCAGGGTCTGAGTCTCTGTGCTGCACTGCGTTaGTCCTGGCCATTCTACTGGTGCCCCCGTTTTATCTGTGACTCT +
Preference number: 6 (lower is better)
Translates to: RRHGCQGLSLCAALR*SWPFYWCPRFICDS
Trigger: AGAGTCACAGATAAAACGGGGGCACCAGTAGAATGGCCAGGACAAACGCAGTGCAGCACAGAGACTCAGACCCTGGCAGCCATGCCTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406381.6
ENST00000578199.5
ENST00000584014.5
ENST00000584601.5
CDS CAA 90 bp TTCTCCCATGGGCTAGACACCACTCCACCCAGCCTCCTCTGCTCCTaGGTCCTTCACCTAACCTTGCCCCCATCTGCATGGTACTCTGTC +
Preference number: 6 (lower is better)
Translates to: FSHGLDTTPPSLLCS*VLHLTLPPSAWYSV
Trigger: GACAGAGTACCATGCAGATGGGGGCAAGGTTAGGTGAAGGACCAAGGAGCAGAGGAGGCTGGGTGGAGTGGTGTCTAGCCCATGGGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583038.5
CDS CAA 90 bp CAGACAGGGAGAAGCCTGACTGAAGGACCCCTCCGCCCATGTCCCTaGCACACTGCAGGTTTAACAGCAGGAGAAAGCTTGCGTGCTTGG +
Preference number: 6 (lower is better)
Translates to: QTGRSLTEGPLRPCP*HTAGLTAGESLRAW
Trigger: CCAAGCACGCAAGCTTTCTCCTGCTGTTAAACCTGCAGTGTGCAAGGGACATGGGCGGAGGGGTCCTTCAGTCAGGCTTCTCCCTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584099.1
CDS TCA 72 bp TCTGCAGTGGGACCTGCCTCACTTGGTTGTGAGCGATaGGCACGTAGCCCTGCACCTCCTGGATATCCTGCA +
Preference number: 6 (lower is better)
Translates to: SAVGPASLGCER*ARSPAPPGYPA
Trigger: TGCAGGATATCCAGGAGGTGCAGGGCTACGTGCTCATCGCTCACAACCAAGTGAGGCAGGTCCCACTGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269571.10
ENST00000406381.6
ENST00000541774.5
ENST00000578199.5
ENST00000578709.5
ENST00000584099.1
ENST00000584450.5
ENST00000584601.5
ENST00000584908.5
CDS GCA 72 bp GCCAAGCCAGCCAGAGCTGTGCTGAGTCAAGAAGGGTaGACAGAGACGGGCAGTCTGCACAAGTCCAAGAAC +
Preference number: 6 (lower is better)
Translates to: AKPARAVLSQEG*TETGSLHKSKN
Trigger: GTTCTTGGACTTGTGCAGACTGCCCGTCTCTGTGCACCCTTCTTGACTCAGCACAGCTCTGGCTGGCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582788.5
ENST00000583038.5
CDS CCA 72 bp TGGACTCACGAGTGGGTGCAGTTGATGGGGCAAGGCTaGCATGCGCCCTCCTCATCTGGAAACTTCCAGATG +
Preference number: 6 (lower is better)
Translates to: WTHEWVQLMGQG*HAPSSSGNFQM
Trigger: CATCTGGAAGTTTCCAGATGAGGAGGGCGCATGCCAGCCTTGCCCCATCAACTGCACCCACTCGTGAGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578199.5
ENST00000582788.5
CDS CCA 72 bp CACCCACCTCGGCTCTCTTCCCAGGGGGAGGATGGGTaGCCAAACATAAGATGGAGATGTCACTCTAGAGGG +
Preference number: 6 (lower is better)
Translates to: HPPRLSSQGEDG*PNIRWRCHSRG
Trigger: CCCTCTAGAGTGACATCTCCATCTTATGTTTGGCCACCCATCCTCCCCCTGGGAAGAGAGCCGAGGTGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578709.5
CDS CAA 72 bp TGCAGAAAAGACCGTTGGACTCACGAGTGGGTGCAGTaGATGGGGCAAGGCTGGCATGCGCCCTCCTCATCT +
Preference number: 6 (lower is better)
Translates to: CRKDRWTHEWVQ*MGQGWHAPSSS
Trigger: AGATGAGGAGGGCGCATGCCAGCCTTGCCCCATCAACTGCACCCACTCGTGAGTCCAACGGTCTTTTCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578199.5
ENST00000582788.5
CDS GCA 72 bp CTGCTCCTTGGTCCTTCACCTAACCTTGCCCCCATCTaGATGGTACTCTGTCTCGTCAATGTCCAGCAGCCG +
Preference number: 6 (lower is better)
Translates to: LLLGPSPNLAPI*MVLCLVNVQQP
Trigger: CGGCTGCTGGACATTGACGAGACAGAGTACCATGCAGATGGGGGCAAGGTTAGGTGAAGGACCAAGGAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583038.5
CDS CCA 72 bp TCCTTGGTCCTTCACCTAACCTTGCCCCCATCTGCATaGTACTCTGTCTCGTCAATGTCCAGCAGCCGAGCC +
Preference number: 6 (lower is better)
Translates to: SLVLHLTLPPSA*YSVSSMSSSRA
Trigger: GGCTCGGCTGCTGGACATTGACGAGACAGAGTACCATGCAGATGGGGGCAAGGTTAGGTGAAGGACCAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583038.5
CDS CCA 72 bp ACTGAGCCAGAGGTTCTGCTCAGGAGTCTAGCATCATaGCAGGTAGCAGGGGGAGATGTGATGCCAGGAGAC +
Preference number: 6 (lower is better)
Translates to: TEPEVLLRSLAS*QVAGGDVMPGD
Trigger: GTCTCCTGGCATCACATCTCCCCCTGCTACCTGCCATGATGCTAGACTCCTGAGCAGAACCTCTGGCTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583038.5
CDS CCA 72 bp CCTAACATACTAGGGCTCCTGGGTCTACATACATCCTaGTCCCCTTTCATGCCCCTTGTGGGCTCCTCCACC +
Preference number: 6 (lower is better)
Translates to: PNILGLLGLHTS*SPFMPLVGSST
Trigger: GGTGGAGGAGCCCACAAGGGGCATGAAAGGGGACCAGGATGTATGTAGACCCAGGAGCCCTAGTATGTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583038.5
CDS TCA 72 bp TCAGGAGTGGGAGGGCCAGAGGGAGCTTTAGTGTACTaGGCCAGAGGTTCTGCTCAGGAGTCTAGCATCATG +
Preference number: 6 (lower is better)
Translates to: SGVGGPEGALVY*ARGSAQESSIM
Trigger: CATGATGCTAGACTCCTGAGCAGAACCTCTGGCTCAGTACACTAAAGCTCCCTCTGGCCCTCCCACTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583038.5
CDS CCA 72 bp CAGGGTCTGAGTCTCTGTGCTGCACTGCGTTTGTCCTaGCCATTCTACTGGTGCCCCCGTTTTATCTGTGAC +
Preference number: 6 (lower is better)
Translates to: QGLSLCAALRLS*PFYWCPRFICD
Trigger: GTCACAGATAAAACGGGGGCACCAGTAGAATGGCCAGGACAAACGCAGTGCAGCACAGAGACTCAGACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406381.6
ENST00000578199.5
ENST00000584014.5
ENST00000584601.5
CDS CAA 90 bp TGCCCGCTTCATTCCACTGATCCACTGGGCCTTTCAGGACATCACTaGCTCACTCGACTTGCTGCTGGAGGTATAGACCACTGGGGTATG +
Preference number: 6 (lower is better)
Translates to: CPLHSTDPLGLSGHH*LTRLAAGGIDHWGM
Trigger: CATACCCCAGTGGTCTATACCTCCAGCAGCAAGTCGAGTGAGCAAGTGATGTCCTGAAAGGCCCAGTGGATCAGTGGAATGAAGCGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584014.5
CDS TCA 72 bp AGGCTCGCAGAACACCTGCTGGGTCAGTCTGTGCTCTaGATCCCAGCTCTCCCGCTTTCTAGTTCTGACATT +
Preference number: 6 (lower is better)
Translates to: RLAEHLLGQSVL*IPALPLSSSDI
Trigger: AATGTCAGAACTAGAAAGCGGGAGAGCTGGGATTCAGAGCACAGACTGACCCAGCAGGTGTTCTGCGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584888.1
CDS GCA 72 bp TGTGCTGCACTGCGTTTGTCCTGGCCATTCTACTGGTaGCCCCGTTTTATCTGTGACTCTTTGCTCAGGGAG +
Preference number: 6 (lower is better)
Translates to: CAALRLSWPFYW*PRFICDSLLRE
Trigger: CTCCCTGAGCAAAGAGTCACAGATAAAACGGGGGCACCAGTAGAATGGCCAGGACAAACGCAGTGCAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000406381.6
ENST00000578199.5
ENST00000584014.5
ENST00000584601.5
CDS CCA 72 bp CTCTGTGCTGCACTGCGTTTGTCCTGGCCATTCTACTaGTGCCCCCGTTTTATCTGTGACTCTTTGCTCAGG +
Preference number: 6 (lower is better)
Translates to: LCAALRLSWPFY*CPRFICDSLLR
Trigger: CCTGAGCAAAGAGTCACAGATAAAACGGGGGCACCAGTAGAATGGCCAGGACAAACGCAGTGCAGCACAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406381.6
ENST00000578199.5
ENST00000584014.5
ENST00000584601.5
CDS TCA 72 bp AGGCATAAGCCAAATTCTGTGCTGGAGGTAGAGTGGTaGACAGGACAGCAAAGGTTCTACCCCGCATGGGGA +
Preference number: 6 (lower is better)
Translates to: RHKPNSVLEVEW*TGQQRFYPAWG
Trigger: TCCCCATGCGGGGTAGAACCTTTGCTGTCCTGTTCACCACTCTACCTCCAGCACAGAATTTGGCTTATGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578199.5
ENST00000584014.5
ENST00000584601.5
CDS CCA 72 bp CTAAGTCTTCCTGCCCGCTTCATTCCACTGATCCACTaGGCCTTTCAGGACATCACTTGCTCACTCGACTTG +
Preference number: 6 (lower is better)
Translates to: LSLPARFIPLIH*AFQDITCSLDL
Trigger: CAAGTCGAGTGAGCAAGTGATGTCCTGAAAGGCCCAGTGGATCAGTGGAATGAAGCGGGCAGGAAGACTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584014.5
CDS CAA 72 bp CTGAAAGGAAAGTCCTCCTTTCTGCAGAAAAGACCGTaGGACTCACGAGTGGGTGCAGTTGATGGGGCAAGG +
Preference number: 6 (lower is better)
Translates to: LKGKSSFLQKRP*DSRVGAVDGAR
Trigger: CCTTGCCCCATCAACTGCACCCACTCGTGAGTCCAACGGTCTTTTCTGCAGAAAGGAGGACTTTCCTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578199.5
ENST00000582788.5
CDS CAA 72 bp CATTCCACTGATCCACTGGGCCTTTCAGGACATCACTaGCTCACTCGACTTGCTGCTGGAGGTATAGACCAC +
Preference number: 6 (lower is better)
Translates to: HSTDPLGLSGHH*LTRLAAGGIDH
Trigger: GTGGTCTATACCTCCAGCAGCAAGTCGAGTGAGCAAGTGATGTCCTGAAAGGCCCAGTGGATCAGTGGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584014.5
CDS CAA 90 bp AAGCATGTGGCCCCATTCCAGGGTCTGTGGACACGATCCAGCAGGTaGGTTTCCACTCTCCCTCCTGTTCATAACCTTTTCACAGACATT +
Preference number: 6 (lower is better)
Translates to: KHVAPFQGLWTRSSR*VSTLPPVHNLFTDI
Trigger: AATGTCTGTGAAAAGGTTATGAACAGGAGGGAGAGTGGAAACCAACCTGCTGGATCGTGTCCACAGACCCTGGAATGGGGCCACATGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583038.5
CDS TCA 72 bp TGCCCTGCCCTCTCTGTATCTCAGTTTCTTCATCAGTaGAAGCAAAGGCCTGGATGGGATGGCGTCTGCAAA +
Preference number: 6 (lower is better)
Translates to: CPALSVSQFLHQ*KQRPGWDGVCK
Trigger: TTTGCAGACGCCATCCCATCCAGGCCTTTGCTTTCACTGATGAAGAAACTGAGATACAGAGAGGGCAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583038.5
CDS GCA 72 bp GCACACTGCAGGTTTAACAGCAGGAGAAAGCTTGCGTaGTTGGGAAGTAGAGGGATTTCAGGGGAAAGGCTT +
Preference number: 6 (lower is better)
Translates to: AHCRFNSRRKLA*LGSRGISGERL
Trigger: AAGCCTTTCCCCTGAAATCCCTCTACTTCCCAAGCACGCAAGCTTTCTCCTGCTGTTAAACCTGCAGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584099.1
CDS CAA 72 bp CCCTCAGTGCTGCAGCTGTACTCTTCTCAGTCTCCCTaGACTTCCAAGGAATTGAACTTTGCCTGTGTCCCT +
Preference number: 6 (lower is better)
Translates to: PSVLQLYSSQSP*TSKELNFACVP
Trigger: AGGGACACAGGCAAAGTTCAATTCCTTGGAAGTCAAGGGAGACTGAGAAGAGTACAGCTGCAGCACTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584684.1
CDS GCA 72 bp TTCTGGATTCCTTGTTTCAGGAGCACTAAGTCTTCCTaGCCGCTTCATTCCACTGATCCACTGGGCCTTTCA +
Preference number: 6 (lower is better)
Translates to: FWIPCFRSTKSS*PLHSTDPLGLS
Trigger: TGAAAGGCCCAGTGGATCAGTGGAATGAAGCGGGCAGGAAGACTTAGTGCTCCTGAAACAAGGAATCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584014.5
CDS CCA 72 bp TTGCTCACTCGACTTGCTGCTGGAGGTATAGACCACTaGGGTATGAATGAGGGCATTCTTGCCTCTGACTTT +
Preference number: 6 (lower is better)
Translates to: LLTRLAAGGIDH*GMNEGILASDF
Trigger: AAAGTCAGAGGCAAGAATGCCCTCATTCATACCCCAGTGGTCTATACCTCCAGCAGCAAGTCGAGTGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584014.5
CDS CCA 72 bp ACTGCAGGTTTAACAGCAGGAGAAAGCTTGCGTGCTTaGGAAGTAGAGGGATTTCAGGGGAAAGGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: TAGLTAGESLRA*EVEGFQGKGFF
Trigger: GAAGAAGCCTTTCCCCTGAAATCCCTCTACTTCCCAAGCACGCAAGCTTTCTCCTGCTGTTAAACCTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584099.1
CDS CAA 90 bp TGCTCAGGGAGTAGCTTTGCATGTGGTCTTGAATATAGCTTTGCTTaGCCACCTGAAATAGAAGAGTTGGACAGAATGGTTCCTGGTCAC +
Preference number: 6 (lower is better)
Translates to: CSGSSFACGLEYSFA*PPEIEELDRMVPGH
Trigger: GTGACCAGGAACCATTCTGTCCAACTCTTCTATTTCAGGTGGCAAAGCAAAGCTATATTCAAGACCACATGCAAAGCTACTCCCTGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584014.5
CDS GCA 72 bp CATTCTACTGGTGCCCCCGTTTTATCTGTGACTCTTTaGTCAGGGAGTAGCTTTGCATGTGGTCTTGAATAT +
Preference number: 6 (lower is better)
Translates to: HSTGAPVLSVTL*SGSSFACGLEY
Trigger: ATATTCAAGACCACATGCAAAGCTACTCCCTGAGCAAAGAGTCACAGATAAAACGGGGGCACCAGTAGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000406381.6
ENST00000578199.5
ENST00000584014.5
ENST00000584601.5
CDS CAA 90 bp CTCTTTGCTCAGGGAGTAGCTTTGCATGTGGTCTTGAATATAGCTTaGCTTTGCCACCATTCATTAAGTGGAAGTGGATCATCACAAAGG +
Preference number: 6 (lower is better)
Translates to: LFAQGVALHVVLNIA*LCHHSLSGSGSSQR
Trigger: CCTTTGTGATGATCCACTTCCACTTAATGAATGGTGGCAAAGCAAAGCTATATTCAAGACCACATGCAAAGCTACTCCCTGAGCAAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578199.5
ENST00000584601.5
CDS CCA 72 bp GGAAGAGGAGACGAGGAACCATTCATTAAGTGGAAGTaGATCATCACAAAGGTTTTCATCCTCATCATCTTC +
Preference number: 6 (lower is better)
Translates to: GRGDEEPFIKWK*IITKVFILIIF
Trigger: GAAGATGATGAGGATGAAAACCTTTGTGATGATCCACTTCCACTTAATGAATGGTTCCTCGTCTCCTCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584014.5
CDS CAA 72 bp CAGGGAGTAGCTTTGCATGTGGTCTTGAATATAGCTTaGCTTTGCCACCATTCATTAAGTGGAAGTGGATCA +
Preference number: 6 (lower is better)
Translates to: QGVALHVVLNIA*LCHHSLSGSGS
Trigger: TGATCCACTTCCACTTAATGAATGGTGGCAAAGCAAAGCTATATTCAAGACCACATGCAAAGCTACTCCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578199.5
ENST00000584601.5
CDS CAA 90 bp TGCTCAGGGAGTAGCTTTGCATGTGGTCTTGAATATAGCTTTGCTTaGCCACCATTCATTAAGTGGAAGTGGATCATCACAAAGGTTTTC +
Preference number: 6 (lower is better)
Translates to: CSGSSFACGLEYSFA*PPFIKWKWIITKVF
Trigger: GAAAACCTTTGTGATGATCCACTTCCACTTAATGAATGGTGGCAAAGCAAAGCTATATTCAAGACCACATGCAAAGCTACTCCCTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578199.5
ENST00000584601.5
CDS CAA 72 bp AGTAGCTTTGCATGTGGTCTTGAATATAGCTTTGCTTaGCCACCTGAAATAGAAGAGTTGGACAGAATGGTT +
Preference number: 6 (lower is better)
Translates to: SSFACGLEYSFA*PPEIEELDRMV
Trigger: AACCATTCTGTCCAACTCTTCTATTTCAGGTGGCAAAGCAAAGCTATATTCAAGACCACATGCAAAGCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406381.6
ENST00000584014.5
CDS CAA 90 bp TGTGGTCTTGAATATAGCTTTGCTTTGCCACCTGAAATAGAAGAGTaGGACAGAATGGTTCCTGGTCACAATATTTTCGGATTTGGTATA +
Preference number: 6 (lower is better)
Translates to: CGLEYSFALPPEIEE*DRMVPGHNIFGFGI
Trigger: TATACCAAATCCGAAAATATTGTGACCAGGAACCATTCTGTCCAACTCTTCTATTTCAGGTGGCAAAGCAAAGCTATATTCAAGACCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584014.5
CDS CCA 72 bp TATAGCTTTGCTTTGCCACCATTCATTAAGTGGAAGTaGATCATCACAAAGGTTTTCATCCTCATCATCTTC +
Preference number: 6 (lower is better)
Translates to: YSFALPPFIKWK*IITKVFILIIF
Trigger: GAAGATGATGAGGATGAAAACCTTTGTGATGATCCACTTCCACTTAATGAATGGTGGCAAAGCAAAGCTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578199.5
ENST00000584601.5
CDS CAA 72 bp CTTAATTTTGTACAAGAGTGTTCCTCAAGAGTGGCTTaGGACTTTGACTGTAAAAGGGATACAAGAAGGTTT +
Preference number: 6 (lower is better)
Translates to: LNFVQECSSRVA*DFDCKRDTRRF
Trigger: AAACCTTCTTGTATCCCTTTTACAGTCAAAGTCCAAAGCCACTCTTGAGGAACACTCTTGTACAAAATTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583038.5
CDS CCA 72 bp TTAATTTTGTACAAGAGTGTTCCTCAAGAGTGGCTTTaGACTTTGACTGTAAAAGGGATACAAGAAGGTTTT +
Preference number: 6 (lower is better)
Translates to: LILYKSVPQEWL*TLTVKGIQEGF
Trigger: AAAACCTTCTTGTATCCCTTTTACAGTCAAAGTCCAAAGCCACTCTTGAGGAACACTCTTGTACAAAATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583038.5