RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ERAP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000164308

Ensembl transcript IDs: ENST00000379904.8, ENST00000437043.8, ENST00000507346.1, ENST00000508077.1, ENST00000510309.1, ENST00000510373.5, ENST00000512869.1, ENST00000513084.5

Found 405 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCTCCTGCAGGGCCCTCCATTCAGGGTCTTCCTGGAAAACCCCCTaGAGGAAGCGCTCCTGTTGCAGTCGGAGTGAACACCCGTCTTGT +
Preference number: 1 (lower is better)
Translates to: LSCRALHSGSSWKTP*RKRSCCSRSEHPSC
Trigger: ACAAGACGGGTGTTCACTCCGACTGCAACAGGAGCGCTTCCTCCAGGGGGTTTTCCAGGAAGACCCTGAATGGAGGGCCCTGCAGGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR GCA 90 bp CATTCAGGGTCTTCCTGGAAAACCCCCTGGAGGAAGCGCTCCTGTTaGAGTCGGAGTGAACACCCGTCTTGTTTAACCACCAGCAGGGGG +
Preference number: 1 (lower is better)
Translates to: HSGSSWKTPWRKRSC*SRSEHPSCLTTSRG
Trigger: CCCCCTGCTGGTGGTTAAACAAGACGGGTGTTCACTCCGACTGCAACAGGAGCGCTTCCTCCAGGGGGTTTTCCAGGAAGACCCTGAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR TCA 90 bp ACAGGCCAGCTTCAAGAGAGCCGAGCGGAGCATCCTGTCCCAGACTaGGCCCTTGTCACTCCAGCTTTGCCTGTCAATCACTGGCTTAAA +
Preference number: 1 (lower is better)
Translates to: TGQLQESRAEHPVPD*ALVTPALPVNHWLK
Trigger: TTTAAGCCAGTGATTGACAGGCAAAGCTGGAGTGACAAGGGCTCAGTCTGGGACAGGATGCTCCGCTCGGCTCTCTTGAAGCTGGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR CCA 90 bp ATCCACTGGGAGAAGAGTTCAGCAGCTTTCTGGATGCAAGGAGCATaGTTCAGGTCACAGGCCAGCTTCAAGAGAGCCGAGCGGAGCATC +
Preference number: 1 (lower is better)
Translates to: IHWEKSSAAFWMQGA*FRSQASFKRAERSI
Trigger: GATGCTCCGCTCGGCTCTCTTGAAGCTGGCCTGTGACCTGAACCATGCTCCTTGCATCCAGAAAGCTGCTGAACTCTTCTCCCAGTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR GCA 90 bp CACTGGATTCCATCCACTGGGAGAAGAGTTCAGCAGCTTTCTGGATaGAAGGAGCATGGTTCAGGTCACAGGCCAGCTTCAAGAGAGCCG +
Preference number: 1 (lower is better)
Translates to: HWIPSTGRRVQQLSG*KEHGSGHRPASREP
Trigger: CGGCTCTCTTGAAGCTGGCCTGTGACCTGAACCATGCTCCTTGCATCCAGAAAGCTGCTGAACTCTTCTCCCAGTGGATGGAATCCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR CCA 90 bp ATACTGAACTGGCCTTCCCCCACCACTCCATCATCATGCATCTTTTaGCTGGATACGATAGCTGAGAGCAGGCAGCTGCACTGCCTGATT +
Preference number: 1 (lower is better)
Translates to: ILNWPSPTTPSSCIF*LDTIAESRQLHCLI
Trigger: AATCAGGCAGTGCAGCTGCCTGCTCTCAGCTATCGTATCCAGCCAAAAGATGCATGATGATGGAGTGGTGGGGGAAGGCCAGTTCAGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437043.8
3UTR CCA 90 bp TTTCCACTGGATTCCATCCACTGGGAGAAGAGTTCAGCAGCTTTCTaGATGCAAGGAGCATGGTTCAGGTCACAGGCCAGCTTCAAGAGA +
Preference number: 1 (lower is better)
Translates to: FPLDSIHWEKSSAAF*MQGAWFRSQASFKR
Trigger: TCTCTTGAAGCTGGCCTGTGACCTGAACCATGCTCCTTGCATCCAGAAAGCTGCTGAACTCTTCTCCCAGTGGATGGAATCCAGTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR TCA 90 bp AAATCCCATGCTAGTTGCTGCCCCTTTGGACGTCTGGCAATCGCATaGAGGAGAGCTGCCAAGTTCTGTGTCTTGATAACCTTTCCTTCC +
Preference number: 1 (lower is better)
Translates to: KSHASCCPFGRLAIA*RRAAKFCVLITFPS
Trigger: GGAAGGAAAGGTTATCAAGACACAGAACTTGGCAGCTCTCCTTCATGCGATTGCCAGACGTCCAAAGGGGCAGCAACTAGCATGGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR GCA 90 bp TTAAATAGGATACTGAACTGGCCTTCCCCCACCACTCCATCATCATaGATCTTTTGGCTGGATACGATAGCTGAGAGCAGGCAGCTGCAC +
Preference number: 1 (lower is better)
Translates to: LNRILNWPSPTTPSS*IFWLDTIAESRQLH
Trigger: GTGCAGCTGCCTGCTCTCAGCTATCGTATCCAGCCAAAAGATGCATGATGATGGAGTGGTGGGGGAAGGCCAGTTCAGTATCCTATTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437043.8
3UTR CCA 90 bp AGTGAACACCCGTCTTGTTTAACCACCAGCAGGGGGATTCCTTTCTaGAGAGTCCATGTAGTCATCATCTCTTTGACCTCTGCATTTTCC +
Preference number: 1 (lower is better)
Translates to: SEHPSCLTTSRGIPF*RVHVVIISLTSAFS
Trigger: GGAAAATGCAGAGGTCAAAGAGATGATGACTACATGGACTCTCCAGAAAGGAATCCCCCTGCTGGTGGTTAAACAAGACGGGTGTTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR GCA 90 bp GGTAAAACGATTCCAAGTAACTCAGACCTTCGAGAAGTGCGGGGCTaGTTGTTTCATGTTGGAGGTAGTAAGTCATGTCAAGAGCTTTGT +
Preference number: 1 (lower is better)
Translates to: GKTIPSNSDLREVRG*LFHVGGSKSCQELC
Trigger: ACAAAGCTCTTGACATGACTTACTACCTCCAACATGAAACAAGCAGCCCCGCACTTCTCGAAGGTCTGAGTTACTTGGAATCGTTTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR GCA 90 bp CATCATGTGGTAAAACGATTCCAAGTAACTCAGACCTTCGAGAAGTaGGGGGCTGCTTGTTTCATGTTGGAGGTAGTAAGTCATGTCAAG +
Preference number: 1 (lower is better)
Translates to: HHVVKRFQVTQTFEK*GAACFMLEVVSHVK
Trigger: CTTGACATGACTTACTACCTCCAACATGAAACAAGCAGCCCCGCACTTCTCGAAGGTCTGAGTTACTTGGAATCGTTTTACCACATGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR CCA 90 bp ACAGAAGTCTACATCTACTTTAATTTTCCACTGGATTCCATCCACTaGGAGAAGAGTTCAGCAGCTTTCTGGATGCAAGGAGCATGGTTC +
Preference number: 1 (lower is better)
Translates to: TEVYIYFNFPLDSIH*EKSSAAFWMQGAWF
Trigger: GAACCATGCTCCTTGCATCCAGAAAGCTGCTGAACTCTTCTCCCAGTGGATGGAATCCAGTGGAAAATTAAAGTAGATGTAGACTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR CCA 90 bp TATATTCCTTTCTTGTGTCTCTGTGAGGGCAGATTCGACTTCATTTaGAATGATCTCAAAAATCTACCCTTGAGGTACTTCATGAATGTA +
Preference number: 1 (lower is better)
Translates to: YIPFLCLCEGRFDFI*NDLKNLPLRYFMNV
Trigger: TACATTCATGAAGTACCTCAAGGGTAGATTTTTGAGATCATTCCAAATGAAGTCGAATCTGCCCTCACAGAGACACAAGAAAGGAATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437043.8
3UTR-3UTR CCA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCAGCCTGCCGAGTAGCTaGGACTACAGGCACCTGCCA +
Preference number: 2 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACSLPSS*DYRHLP
Trigger: TGGCAGGTGCCTGTAGTCCCAGCTACTCGGCAGGCT...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
3UTR-3UTR TCA 90 bp ACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGATGGTCTCCATCTCCTaGCCTCGTGATCCGCCCTTC +
Preference number: 2 (lower is better)
Translates to: TASSTSRVYAIFLLQPAEMVSIS*PRDPPF
Trigger: GAAGGGCGGATCACGAGGTCAGGAGATGGAGACCAT...CTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
3UTR-3UTR TCA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCGCTGGATACGATAGCTaGGAGCAGGCAGCTGCACTG +
Preference number: 2 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACAGYDS*EQAAAL
Trigger: CAGTGCAGCTGCCTGCTCTCAGCTATCGTATCCAGC...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437043.8
3UTR-3UTR CCA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCTCCTGGAAAACCCCCTaGAGGAAGCGCTCCTGTTGC +
Preference number: 2 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACSWKTP*RKRSCC
Trigger: GCAACAGGAGCGCTTCCTCCAGGGGGTTTTCCAGGA...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR-3UTR TCA 90 bp TGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAATGGTCTCCATCTCCTaGCCTCGTGATCCGCCCTTC +
Preference number: 2 (lower is better)
Translates to: CKLHLPGLCHFPAAACRVMVSIS*PRDPPF
Trigger: GAAGGGCGGATCACGAGGTCAGGAGATGGAGACCAT...TACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
3UTR-3UTR CCA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCGCCCCTTTGGACGTCTaGCAATCGCATGAAGGAGAG +
Preference number: 2 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACAPLDV*QSHEGE
Trigger: CTCTCCTTCATGCGATTGCCAGACGTCCAAAGGGGC...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR-3UTR CCA 90 bp CTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTCATTCAGGGTCTTCCTaGAAAACCCCCTGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: LQAPPPGFMPFSCCSLPSHSGSS*KTPWRK
Trigger: CTTCCTCCAGGGGGTTTTCCAGGAAGACCCTGAATG...ACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR-3UTR GCA 90 bp TGCAAGGAGCATGGTTCAGGTCACAGGCCAGCTTCAAGAGAGCCGAGCGGAGCACATCTCTTTGACCTCTaGATTTTCCCCCAGAAAGGC +
Preference number: 2 (lower is better)
Translates to: CKEHGSGHRPASREPSGAHLFDL*IFPQKG
Trigger: GCCTTTCTGGGGGAAAATGCAGAGGTCAAAGAGATG...TGCTCCGCTCGGCTCTCTTGAAGCTGGCCTGTGACCTGAACCATGCTCCTTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR-3UTR CCA 90 bp CCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAGCTGGGACTACAGGAGGGGGATTCCTTTCTaGAGAGTCCATGTAGTCATC +
Preference number: 2 (lower is better)
Translates to: PGFMPFSCCSLPSSWDYRRGIPF*RVHVVI
Trigger: GATGACTACATGGACTCTCCAGAAAGGAATCCCCCT...CCTGTAGTCCCAGCTACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR-3UTR TCA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCTTTCTTGTGTCTCTGTaGGGGCAGATTCGACTTCAT +
Preference number: 2 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACFLVSL*GQIRLH
Trigger: ATGAAGTCGAATCTGCCCTCACAGAGACACAAGAAA...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437043.8
3UTR-3UTR GCA 90 bp TGCATCTTTTGGCTGGATACGATAGCTGAGAGCAGGCAGCTGCACTGCCTGATTGCTGGAATGCAGTGGTaGAATCTCGGCTCACTGCAA +
Preference number: 2 (lower is better)
Translates to: CIFWLDTIAESRQLHCLIAGMQW*NLGSLQ
Trigger: TTGCAGTGAGCCGAGATTGCACCACTGCATTCCAGC...AATCAGGCAGTGCAGCTGCCTGCTCTCAGCTATCGTATCCAGCCAAAAGATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437043.8
3UTR-3UTR GCA 90 bp TTTCATGTTGGAGGTAGTAAGTCATGTCAAGAGCTTTGTCTAGGGTCAGTCTCCAGGAAGCGCTCCTGTTaGAGTCGGAGTGAACACCCG +
Preference number: 2 (lower is better)
Translates to: FHVGGSKSCQELCLGSVSRKRSC*SRSEHP
Trigger: CGGGTGTTCACTCCGACTGCAACAGGAGCGCTTCCT...GGAGACTGACCCTAGACAAAGCTCTTGACATGACTTACTACCTCCAACATGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR-3UTR GCA 90 bp CACATCATGAATCAGACCTACTCTGTCCTTAGGTCTGAGAAGTGTGTGGTTCTGGCTGGAATGCAGTGGTaGAATCTCGGCTCACTGCAA +
Preference number: 2 (lower is better)
Translates to: HIMNQTYSVLRSEKCVVLAGMQW*NLGSLQ
Trigger: TTGCAGTGAGCCGAGATTGCACCACTGCATTCCAGC...CAGAACCACACACTTCTCAGACCTAAGGACAGAGTAGGTCTGATTCATGATGTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR-3UTR TCA 90 bp CACATCATGAATCAGACCTACTCTGTCCTTAGGTCTGAGAAGTGTGTGGTTCTGCTGTTGCAGTCGGAGTaGACACCCGTCTTGTTTAAC +
Preference number: 2 (lower is better)
Translates to: HIMNQTYSVLRSEKCVVLLLQSE*TPVLFN
Trigger: GTTAAACAAGACGGGTGTTCACTCCGACTGCAACAG...CAGAACCACACACTTCTCAGACCTAAGGACAGAGTAGGTCTGATTCATGATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR-3UTR GCA 90 bp ACCCTGTTTGACTTCATGCAGGCAGTCATGTCTGATGTACCTTTTCTTTTCTTTTTTCCTGCTGCAGCCTaGCGAGTAGCTGGGACTACA +
Preference number: 2 (lower is better)
Translates to: TLFDFMQAVMSDVPFLFFFPAAA*RVAGTT
Trigger: TGTAGTCCCAGCTACTCGGCAGGCTGCAGCAGGAAA...AAAGAAAAGAAAAGGTACATCAGACATGACTGCCTGCATGAAGTCAAACAGGGT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000437043.8
3UTR-3UTR GCA 90 bp TTGCAACTTATCCTTGGAAGAAAAGTGAGCTGTTGTGCCAGAGATGATCATCCTCAGCAGCTTTCTGGATaGAAGGAGCATGGTTCAGGT +
Preference number: 2 (lower is better)
Translates to: LQLILGRKVSCCARDDHPQQLSG*KEHGSG
Trigger: ACCTGAACCATGCTCCTTGCATCCAGAAAGCTGCTG...AGGATGATCATCTCTGGCACAACAGCTCACTTTTCTTCCAAGGATAAGTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR CAA 90 bp AAAACGATTCCAAGTAACTCAGACCTTCGAGAAGTGCGGGGCTGCTaGTTTCATGTTGGAGGTAGTAAGTCATGTCAAGAGCTTTGTCTA +
Preference number: 2 (lower is better)
Translates to: KTIPSNSDLREVRGC*FHVGGSKSCQELCL
Trigger: TAGACAAAGCTCTTGACATGACTTACTACCTCCAACATGAAACAAGCAGCCCCGCACTTCTCGAAGGTCTGAGTTACTTGGAATCGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR-3UTR GCA 90 bp AGAGCTGCCAAGTTCTGTGTCTTGATAACCTTTCCTTCCATTCCTAGTTCAATTTTTATGCCATTTTCCTaGTGCAGCCTGCCGAGTAGC +
Preference number: 2 (lower is better)
Translates to: RAAKFCVLITFPSIPSSIFMPFS*CSLPSS
Trigger: GCTACTCGGCAGGCTGCAGCAGGAAAATGGCATAAA...AATTGAACTAGGAATGGAAGGAAAGGTTATCAAGACACAGAACTTGGCAGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR-3UTR GCA 90 bp CACTTTCCCCTCTTGACCCAACATCCCAAGTCTTCCTTAATAATGCAAACATCACCCTGTTTGACTTCATaGAGGCAGTCATGTCTGATG +
Preference number: 2 (lower is better)
Translates to: HFPLLTQHPKSSLIMQTSPCLTS*RQSCLM
Trigger: CATCAGACATGACTGCCTGCATGAAGTCAAACAGGG...TGATGTTTGCATTATTAAGGAAGACTTGGGATGTTGGGTCAAGAGGGGAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437043.8
3UTR CAA 90 bp TTTGACCAGAGACCATTCATTTGGAATGCTCTCAAAAATCTACCCTaGAGGTTCTTCATGAATGTAAGGCTTAACCCAAAAGGCCTTCCT +
Preference number: 2 (lower is better)
Translates to: FDQRPFIWNALKNLP*RFFMNVRLNPKGLP
Trigger: AGGAAGGCCTTTTGGGTTAAGCCTTACATTCATGAAGAACCTCAAGGGTAGATTTTTGAGAGCATTCCAAATGAATGGTCTCTGGTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437043.8
3UTR-3UTR CCA 90 bp TTTCAGAGATATCTGAAATATTCCTTCTGTCCATCATGTGGTAAAACGATTCCACGTGGAGTAGGTCAATaGGATATGCCACAGGTACCT +
Preference number: 2 (lower is better)
Translates to: FQRYLKYSFCPSCGKTIPRGVGQ*DMPQVP
Trigger: AGGTACCTGTGGCATATCCCATTGACCTACTCCACG...TGGAATCGTTTTACCACATGATGGACAGAAGGAATATTTCAGATATCTCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR-3UTR TCA 90 bp GATCTCAAAAATCTACCCTTGAGGTACTTCATGAATGTAAGGCTTAAACCAAATGCAGGCAGTCATGTCTaGTGTACCTTTTCTTTTCTT +
Preference number: 2 (lower is better)
Translates to: DLKNLPLRYFMNVRLKPNAGSHV*CTFSFL
Trigger: AAGAAAAGAAAAGGTACATCAGACATGACTGCCTGC...ATTTGGTTTAAGCCTTACATTCATGAAGTACCTCAAGGGTAGATTTTTGAGATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000437043.8
3UTR CCA 72 bp AGGGCCCTCCATTCAGGGTCTTCCTGGAAAACCCCCTaGAGGAAGCGCTCCTGTTGCAGTCGGAGTGAACAC +
Preference number: 3 (lower is better)
Translates to: RALHSGSSWKTP*RKRSCCSRSEH
Trigger: GTGTTCACTCCGACTGCAACAGGAGCGCTTCCTCCAGGGGGTTTTCCAGGAAGACCCTGAATGGAGGGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR CCA 72 bp TACCTCTCCTGCAGGGCCCTCCATTCAGGGTCTTCCTaGAAAACCCCCTGGAGGAAGCGCTCCTGTTGCAGT +
Preference number: 3 (lower is better)
Translates to: YLSCRALHSGSS*KTPWRKRSCCS
Trigger: ACTGCAACAGGAGCGCTTCCTCCAGGGGGTTTTCCAGGAAGACCCTGAATGGAGGGCCCTGCAGGAGAGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR TCA 72 bp GGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTaGCCTCGTGATCCGCCCTTCTCAGCCTCCCAAAGT +
Preference number: 3 (lower is better)
Translates to: GLTVLARMVSIS*PRDPPFSASQS
Trigger: ACTTTGGGAGGCTGAGAAGGGCGGATCACGAGGTCAGGAGATGGAGACCATCCTGGCTAACACGGTGAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
3UTR TCA 72 bp AACCCCCTGGAGGAAGCGCTCCTGTTGCAGTCGGAGTaGACACCCGTCTTGTTTAACCACCAGCAGGGGGAT +
Preference number: 3 (lower is better)
Translates to: NPLEEALLLQSE*TPVLFNHQQGD
Trigger: ATCCCCCTGCTGGTGGTTAAACAAGACGGGTGTTCACTCCGACTGCAACAGGAGCGCTTCCTCCAGGGGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR TCA 72 bp CTTCAAGAGAGCCGAGCGGAGCATCCTGTCCCAGACTaGGCCCTTGTCACTCCAGCTTTGCCTGTCAATCAC +
Preference number: 3 (lower is better)
Translates to: LQESRAEHPVPD*ALVTPALPVNH
Trigger: GTGATTGACAGGCAAAGCTGGAGTGACAAGGGCTCAGTCTGGGACAGGATGCTCCGCTCGGCTCTCTTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR GCA 72 bp TCTTCCTGGAAAACCCCCTGGAGGAAGCGCTCCTGTTaGAGTCGGAGTGAACACCCGTCTTGTTTAACCACC +
Preference number: 3 (lower is better)
Translates to: SSWKTPWRKRSC*SRSEHPSCLTT
Trigger: GGTGGTTAAACAAGACGGGTGTTCACTCCGACTGCAACAGGAGCGCTTCCTCCAGGGGGTTTTCCAGGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR CCA 72 bp TGGCCTTCCCCCACCACTCCATCATCATGCATCTTTTaGCTGGATACGATAGCTGAGAGCAGGCAGCTGCAC +
Preference number: 3 (lower is better)
Translates to: WPSPTTPSSCIF*LDTIAESRQLH
Trigger: GTGCAGCTGCCTGCTCTCAGCTATCGTATCCAGCCAAAAGATGCATGATGATGGAGTGGTGGGGGAAGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437043.8
3UTR GCA 72 bp CCATCCACTGGGAGAAGAGTTCAGCAGCTTTCTGGATaGAAGGAGCATGGTTCAGGTCACAGGCCAGCTTCA +
Preference number: 3 (lower is better)
Translates to: PSTGRRVQQLSG*KEHGSGHRPAS
Trigger: TGAAGCTGGCCTGTGACCTGAACCATGCTCCTTGCATCCAGAAAGCTGCTGAACTCTTCTCCCAGTGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR CCA 72 bp GATTCCATCCACTGGGAGAAGAGTTCAGCAGCTTTCTaGATGCAAGGAGCATGGTTCAGGTCACAGGCCAGC +
Preference number: 3 (lower is better)
Translates to: DSIHWEKSSAAF*MQGAWFRSQAS
Trigger: GCTGGCCTGTGACCTGAACCATGCTCCTTGCATCCAGAAAGCTGCTGAACTCTTCTCCCAGTGGATGGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR TCA 72 bp GCTAGTTGCTGCCCCTTTGGACGTCTGGCAATCGCATaGAGGAGAGCTGCCAAGTTCTGTGTCTTGATAACC +
Preference number: 3 (lower is better)
Translates to: ASCCPFGRLAIA*RRAAKFCVLIT
Trigger: GGTTATCAAGACACAGAACTTGGCAGCTCTCCTTCATGCGATTGCCAGACGTCCAAAGGGGCAGCAACTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR CCA 72 bp CAAAATCCCATGCTAGTTGCTGCCCCTTTGGACGTCTaGCAATCGCATGAAGGAGAGCTGCCAAGTTCTGTG +
Preference number: 3 (lower is better)
Translates to: QNPMLVAAPLDV*QSHEGELPSSV
Trigger: CACAGAACTTGGCAGCTCTCCTTCATGCGATTGCCAGACGTCCAAAGGGGCAGCAACTAGCATGGGATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR-3UTR CAA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCCTGATGCTTGCTCGTaGACAAAGCATACAGAATTT +
Preference number: 3 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACPDACS*TKHTEF
Trigger: AAATTCTGTATGCTTTGTCAACGAGCAAGCATCAGG...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR-3UTR CAA 90 bp AGTAACTCAGACCTTCGAGAAGTGCGGGGCTGCTTGTTTCATGTTGGAGGTAGTCAGCTGTGTAATGAGTaGGTCCCATCCATGACCCTC +
Preference number: 3 (lower is better)
Translates to: SNSDLREVRGCLFHVGGSQLCNE*VPSMTL
Trigger: GAGGGTCATGGATGGGACCAACTCATTACACAGCTG...ACTACCTCCAACATGAAACAAGCAGCCCCGCACTTCTCGAAGGTCTGAGTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR-3UTR CAA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCGTTCAGCACTTGACATaGACAGTTCATATTGCTCTA +
Preference number: 3 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACVQHLT*TVHIAL
Trigger: TAGAGCAATATGAACTGTCAATGTCAAGTGCTGAAC...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR GCA 72 bp ATACTGAACTGGCCTTCCCCCACCACTCCATCATCATaGATCTTTTGGCTGGATACGATAGCTGAGAGCAGG +
Preference number: 3 (lower is better)
Translates to: ILNWPSPTTPSS*IFWLDTIAESR
Trigger: CCTGCTCTCAGCTATCGTATCCAGCCAAAAGATGCATGATGATGGAGTGGTGGGGGAAGGCCAGTTCAGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437043.8
3UTR GCA 72 bp CCCCTTTGGACGTCTGGCAATCGCATGAAGGAGAGCTaGCAAGTTCTGTGTCTTGATAACCTTTCCTTCCAT +
Preference number: 3 (lower is better)
Translates to: PLWTSGNRMKES*QVLCLDNLSFH
Trigger: ATGGAAGGAAAGGTTATCAAGACACAGAACTTGGCAGCTCTCCTTCATGCGATTGCCAGACGTCCAAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR TCA 72 bp TCCATCATCATGCATCTTTTGGCTGGATACGATAGCTaGGAGCAGGCAGCTGCACTGCCTGATTTCTTGAGA +
Preference number: 3 (lower is better)
Translates to: SIIMHLLAGYDS*EQAAALPDFLR
Trigger: TCTCAAGAAATCAGGCAGTGCAGCTGCCTGCTCTCAGCTATCGTATCCAGCCAAAAGATGCATGATGATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437043.8
3UTR GCA 72 bp ATTCCAAGTAACTCAGACCTTCGAGAAGTGCGGGGCTaGTTGTTTCATGTTGGAGGTAGTAAGTCATGTCAA +
Preference number: 3 (lower is better)
Translates to: IPSNSDLREVRG*LFHVGGSKSCQ
Trigger: TTGACATGACTTACTACCTCCAACATGAAACAAGCAGCCCCGCACTTCTCGAAGGTCTGAGTTACTTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR-3UTR CAA 90 bp GTTCAATTAACTTCAGTAACTTTTCCTGATGCTTGCTCGTTGACAAAGCATACAGAAGTGCGGGGCTGCTaGTTTCATGTTGGAGGTAGT +
Preference number: 3 (lower is better)
Translates to: VQLTSVTFPDACSLTKHTEVRGC*FHVGGS
Trigger: ACTACCTCCAACATGAAACAAGCAGCCCCGCACTTC...TGTATGCTTTGTCAACGAGCAAGCATCAGGAAAAGTTACTGAAGTTAATTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR TCA 72 bp GGCACATCCATGGCCACCCAAACTGTATTCTATCTCTaGCTGTGGCATCAAAGAAAGGTATATGGAATTATA +
Preference number: 3 (lower is better)
Translates to: GTSMATQTVFYL*LWHQRKVYGII
Trigger: TATAATTCCATATACCTTTCTTTGATGCCACAGTCAGAGATAGAATACAGTTTGGGTGGCCATGGATGTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437043.8
3UTR TCA 72 bp AGTTTCACCTCTTGCAACTTATCCTTGGAAGAAAAGTaGGCTGTTGTGCCAGAGATGATCATCCTTATGTCA +
Preference number: 3 (lower is better)
Translates to: SFTSCNLSLEEK*AVVPEMIILMS
Trigger: TGACATAAGGATGATCATCTCTGGCACAACAGCTCACTTTTCTTCCAAGGATAAGTTGCAAGAGGTGAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR CCA 72 bp TTCTTGTGTCTCTGTGAGGGCAGATTCGACTTCATTTaGAATGATCTCAAAAATCTACCCTTGAGGTACTTC +
Preference number: 3 (lower is better)
Translates to: FLCLCEGRFDFI*NDLKNLPLRYF
Trigger: GAAGTACCTCAAGGGTAGATTTTTGAGATCATTCCAAATGAAGTCGAATCTGCCCTCACAGAGACACAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437043.8
3UTR-3UTR CAA 90 bp CACTTTCCCCTCTTGACCCAACATCCCAAGTCTTCCTTAATAATGCAAACATCACTCAAAAATCTACCCTaGAGGTACTTCATGAATGTA +
Preference number: 3 (lower is better)
Translates to: HFPLLTQHPKSSLIMQTSLKNLP*RYFMNV
Trigger: TACATTCATGAAGTACCTCAAGGGTAGATTTTTGAG...TGATGTTTGCATTATTAAGGAAGACTTGGGATGTTGGGTCAAGAGGGGAAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437043.8
3UTR TCA 72 bp TATCCTTGGAAGAAAAGTGAGCTGTTGTGCCAGAGATaGTCATCCTTATGTCATATGAGCCCAAGTCAAATT +
Preference number: 3 (lower is better)
Translates to: YPWKKSELLCQR*SSLCHMSPSQI
Trigger: AATTTGACTTGGGCTCATATGACATAAGGATGATCATCTCTGGCACAACAGCTCACTTTTCTTCCAAGGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR CCA 72 bp TTGACCATTCATTCATTTGACCAGAGACCATTCATTTaGAATGCTCTCAAAAATCTACCCTTGAGGTTCTTC +
Preference number: 3 (lower is better)
Translates to: LTIHSFDQRPFI*NALKNLPLRFF
Trigger: GAAGAACCTCAAGGGTAGATTTTTGAGAGCATTCCAAATGAATGGTCTCTGGTCAAATGAATGAATGGTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437043.8
3UTR TCA 72 bp TCCATTCCTAGTTCAATTAACTTCAGTAACTTTTCCTaGTGCTTGCTCGTTGACAAAGCATACAGAATTTTG +
Preference number: 3 (lower is better)
Translates to: SIPSSINFSNFS*CLLVDKAYRIL
Trigger: CAAAATTCTGTATGCTTTGTCAACGAGCAAGCATCAGGAAAAGTTACTGAAGTTAATTGAACTAGGAATGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR CCA 90 bp CCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAGCTGGGACTACAGGAGCCTGCCGAGTAGCTaGGACTACAGGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: PGFMPFSCCSLPSSWDYRSLPSS*DYRHLP
Trigger: TGGCAGGTGCCTGTAGTCCCAGCTACTCGGCAGGCT...CCTGTAGTCCCAGCTACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp TGCAAGGAGCATGGTTCAGGTCACAGGCCAGCTTCAAGAGAGCCGAGCGGAGCAAGCCTGCCGAGTAGCTaGGACTACAGGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: CKEHGSGHRPASREPSGASLPSS*DYRHLP
Trigger: TGGCAGGTGCCTGTAGTCCCAGCTACTCGGCAGGCT...TGCTCCGCTCGGCTCTCTTGAAGCTGGCCTGTGACCTGAACCATGCTCCTTGCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR TCA 90 bp ACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGCATCCTGTCCCAGACTaGGCCCTTGTCACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: TASSTSRVYAIFLLQPAEHPVPD*ALVTPA
Trigger: AGCTGGAGTGACAAGGGCTCAGTCTGGGACAGGATG...CTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp CACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGACATCCTGTCCCAGACTaGGCCCTTGTCACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: HCKLHLPGLCHFPAAACRHPVPD*ALVTPA
Trigger: AGCTGGAGTGACAAGGGCTCAGTCTGGGACAGGATG...TCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp CCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAGCTGGGACTACAGGATGGTCTCCATCTCCTaGCCTCGTGATCCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: PGFMPFSCCSLPSSWDYRMVSIS*PRDPPF
Trigger: GAAGGGCGGATCACGAGGTCAGGAGATGGAGACCAT...CCTGTAGTCCCAGCTACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp TCCTGGAAAACCCCCTGGAGGAAGCGCTCCTGTTGCAGTCGGAGTGAACACCCGGGGAGCCTTAGCTCCTaGCAAGGAAATCGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SWKTPWRKRSCCSRSEHPGSLSS*QGNRSP
Trigger: TGGGGAACGATTTCCTTGGCAGGAGCTAAGGCTCCC...CGGGTGTTCACTCCGACTGCAACAGGAGCGCTTCCTCCAGGGGGTTTTCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR GCA 90 bp ACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGAGGAAGCGCTCCTGTTaGAGTCGGAGTGAACACCCG +
Preference number: 4 (lower is better)
Translates to: TASSTSRVYAIFLLQPAERKRSC*SRSEHP
Trigger: CGGGTGTTCACTCCGACTGCAACAGGAGCGCTTCCT...CTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp CCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAGCTGGGACTACAGGAGTCGGGGTTTCCGCTaGTTTGGAGATAGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: PGFMPFSCCSLPSSWDYRSRGFR*FGDRAG
Trigger: TCCCGCCCTATCTCCAAACCAGCGGAAACCCCGACT...CCTGTAGTCCCAGCTACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp CTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTTCCTGGAAAACCCCCTaGAGGAAGCGCTCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LQAPPPGFMPFSCCSLPSSWKTP*RKRSCC
Trigger: GCAACAGGAGCGCTTCCTCCAGGGGGTTTTCCAGGA...ACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp ACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGCGTCTGGCAATCGCATaGAGGAGAGCTGCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: TASSTSRVYAIFLLQPAERLAIA*RRAAKF
Trigger: GAACTTGGCAGCTCTCCTTCATGCGATTGCCAGACG...CTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp CACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAAGCAAGGGAAAGCCATaGGTGCCTGGGTTGGCTCAA +
Preference number: 4 (lower is better)
Translates to: HCKLHLPGLCHFPAAACRSKGKP*VPGLAQ
Trigger: TTGAGCCAACCCAGGCACGCATGGCTTTCCCTTGCT...TCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp CTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTTCCCATGCTAGTTGCTaGCCCTTTGGACGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: LQAPPPGFMPFSCCSLPSSHASC*PFGRLA
Trigger: TGCCAGACGTCCAAAGGGGCAGCAACTAGCATGGGA...ACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp CACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGATTTCCTGCTGCAGCCTaGCGAGTAGCTGGGACTACA +
Preference number: 4 (lower is better)
Translates to: HCKLHLPGLCHFPAAACRFPAAA*RVAGTT
Trigger: TGTAGTCCCAGCTACTCGGCAGGCTGCAGCAGGAAA...TCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp CTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTCCCATTAGTGGCTACTaGGAAAGCCCCAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: LQAPPPGFMPFSCCSLPSPISGY*ESPRIL
Trigger: GAGGATCCTGGGGCTTTCCCAGTAGCCACTAATGGG...ACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp CACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGATGGTGCGCCAGTTCATaGGCTATGACTCTGGTGACC +
Preference number: 4 (lower is better)
Translates to: HCKLHLPGLCHFPAAACRWCASS*AMTLVT
Trigger: GGTCACCAGAGTCATAGCCCATGAACTGGCGCACCA...TCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCTGGTGCGCCAGTTCATaGGCTATGACTCTGGTGACC +
Preference number: 4 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACWCASS*AMTLVT
Trigger: GGTCACCAGAGTCATAGCCCATGAACTGGCGCACCA...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp TGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAAGTCGGGGTTTCCGCTaGTTTGGAGATAGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: CKLHLPGLCHFPAAACRVSRGFR*FGDRAG
Trigger: TCCCGCCCTATCTCCAAACCAGCGGAAACCCCGACT...TACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp AACTCGTGGAGTAGGTCAATGGGATATGCCACAGGTACCTCTCCTGCAGGGCCCTCCTGGAAAACCCCCTaGAGGAAGCGCTCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: NSWSRSMGYATGTSPAGPSWKTP*RKRSCC
Trigger: GCAACAGGAGCGCTTCCTCCAGGGGGTTTTCCAGGA...GGGCCCTGCAGGAGAGGTACCTGTGGCATATCCCATTGACCTACTCCACGAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR CCA 90 bp CTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTTGGATGCAAGGAGCATaGTTCAGGTCACAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LQAPPPGFMPFSCCSLPSWMQGA*FRSQAS
Trigger: GCTGGCCTGTGACCTGAACCATGCTCCTTGCATCCA...ACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp CACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGCCCCTTTGGACGTCTaGCAATCGCATGAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: HCKLHLPGLCHFPAAACRAPLDV*QSHEGE
Trigger: CTCTCCTTCATGCGATTGCCAGACGTCCAAAGGGGC...TCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp TCCTGGAAAACCCCCTGGAGGAAGCGCTCCTGTTGCAGTCGGAGTGAACACCCGCATCCTGCTGTTGTCTaGGCACCCACAGAATACACA +
Preference number: 4 (lower is better)
Translates to: SWKTPWRKRSCCSRSEHPHPAVV*APTEYT
Trigger: TGTGTATTCTGTGGGTGCTCAGACAACAGCAGGATG...CGGGTGTTCACTCCGACTGCAACAGGAGCGCTTCCTCCAGGGGGTTTTCCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR TCA 90 bp TGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTACGTCTGGCAATCGCATaGAGGAGAGCTGCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: CKLHLPGLCHFPAAACRVRLAIA*RRAAKF
Trigger: GAACTTGGCAGCTCTCCTTCATGCGATTGCCAGACG...TACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp TGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAGGGAGCCTTAGCTCCTaGCAAGGAAATCGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: CKLHLPGLCHFPAAACRVGSLSS*QGNRSP
Trigger: TGGGGAACGATTTCCTTGGCAGGAGCTAAGGCTCCC...TACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp CACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAAGGGAAAGCCATGCGTaGCTGGGTTGGCTCAAAATC +
Preference number: 4 (lower is better)
Translates to: HCKLHLPGLCHFPAAACRRESHA*LGWLKI
Trigger: GATTTTGAGCCAACCCAGGCACGCATGGCTTTCCCT...TCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCTTGCCAAACCACTGGTaGGCCAGTTCATGGGCTATG +
Preference number: 4 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACLPNHW*ASSWAM
Trigger: CATAGCCCATGAACTGGCGCACCAGTGGTTTGGCAA...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp CTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTCGAGAAGTGCGGGGCTaGTTGTTTCATGTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: LQAPPPGFMPFSCCSLPSREVRG*LFHVGG
Trigger: ACCTCCAACATGAAACAAGCAGCCCCGCACTTCTCG...ACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp ACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGCAGACCTTCGAGAAGTaGGGGGCTGCTTGTTTCATG +
Preference number: 4 (lower is better)
Translates to: TASSTSRVYAIFLLQPAEQTFEK*GAACFM
Trigger: CATGAAACAAGCAGCCCCGCACTTCTCGAAGGTCTG...CTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp TGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTATTTCCTGCTGCAGCCTaGCGAGTAGCTGGGACTACA +
Preference number: 4 (lower is better)
Translates to: CKLHLPGLCHFPAAACRVFPAAA*RVAGTT
Trigger: TGTAGTCCCAGCTACTCGGCAGGCTGCAGCAGGAAA...TACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp TGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAAGGTTGCCAAACCACTaGTGCGCCAGTTCATGGGCT +
Preference number: 4 (lower is better)
Translates to: CKLHLPGLCHFPAAACRVRLPNH*CASSWA
Trigger: AGCCCATGAACTGGCGCACCAGTGGTTTGGCAACCT...TACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp ACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGCATTCAGGGTCTTCCTaGAAAACCCCCTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: TASSTSRVYAIFLLQPAEHSGSS*KTPWRK
Trigger: CTTCCTCCAGGGGGTTTTCCAGGAAGACCCTGAATG...CTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
3UTR CAA 72 bp AGAGCCGAGCGGAGCATCCTGTCCCAGACTGAGCCCTaGTCACTCCAGCTTTGCCTGTCAATCACTGGCTTA +
Preference number: 4 (lower is better)
Translates to: RAERSILSQTEP*SLQLCLSITGL
Trigger: TAAGCCAGTGATTGACAGGCAAAGCTGGAGTGACAAGGGCTCAGTCTGGGACAGGATGCTCCGCTCGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR TCA 90 bp ACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGCATAATGGAGAGGAATaGCCACACTGGGGAGCCTTA +
Preference number: 4 (lower is better)
Translates to: TASSTSRVYAIFLLQPAEHNGEE*PHWGAL
Trigger: TAAGGCTCCCCAGTGTGGTCATTCCTCTCCATTATG...CTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp CACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGACATAATGGAGAGGAATaGCCACACTGGGGAGCCTTA +
Preference number: 4 (lower is better)
Translates to: HCKLHLPGLCHFPAAACRHNGEE*PHWGAL
Trigger: TAAGGCTCCCCAGTGTGGTCATTCCTCTCCATTATG...TCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp CACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGACTGTTGCAGTCGGAGTaGACACCCGTCTTGTTTAAC +
Preference number: 4 (lower is better)
Translates to: HCKLHLPGLCHFPAAACRLLQSE*TPVLFN
Trigger: GTTAAACAAGACGGGTGTTCACTCCGACTGCAACAG...TCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp CTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTCATCCTGCTGTTGTCTaGGCACCCACAGAATACACA +
Preference number: 4 (lower is better)
Translates to: LQAPPPGFMPFSCCSLPSHPAVV*APTEYT
Trigger: TGTGTATTCTGTGGGTGCTCAGACAACAGCAGGATG...ACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp GTATTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCATGGTCTCCATCTCCTaGCCTCGTGATCCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: VFLAETGSHRVSQDGLHLMVSIS*PRDPPF
Trigger: GAAGGGCGGATCACGAGGTCAGGAGATGGAGACCAT...GAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp TTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGGGGAGCCTTAGCTCCTaGCAAGGAAATCGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: FLAETGSHRVSQDGLHLLGSLSS*QGNRSP
Trigger: TGGGGAACGATTTCCTTGGCAGGAGCTAAGGCTCCC...CAGGAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp TTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGAGCAAGGGAAAGCCATaGGTGCCTGGGTTGGCTCAA +
Preference number: 4 (lower is better)
Translates to: FLAETGSHRVSQDGLHLLSKGKP*VPGLAQ
Trigger: TTGAGCCAACCCAGGCACGCATGGCTTTCCCTTGCT...CAGGAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp CACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGACCGTTTGTCTGGGGATaGATAGATGGACACCTTTGG +
Preference number: 4 (lower is better)
Translates to: HCKLHLPGLCHFPAAACRPFVWG*IDGHLW
Trigger: CCAAAGGTGTCCATCTATGCATCCCCAGACAAACGG...TCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379904.8
CDS-3UTR GCA 90 bp TGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTATTGCCAAACCACTGGTaGGCCAGTTCATGGGCTATG +
Preference number: 4 (lower is better)
Translates to: CKLHLPGLCHFPAAACRVLPNHW*ASSWAM
Trigger: CATAGCCCATGAACTGGCGCACCAGTGGTTTGGCAA...TACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp GTATTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCAGGAAGCGCTCCTGTTaGAGTCGGAGTGAACACCCG +
Preference number: 4 (lower is better)
Translates to: VFLAETGSHRVSQDGLHLRKRSC*SRSEHP
Trigger: CGGGTGTTCACTCCGACTGCAACAGGAGCGCTTCCT...GAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp ACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGCAGCAGCTTTCTGGATaGAAGGAGCATGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: TASSTSRVYAIFLLQPAEQQLSG*KEHGSG
Trigger: ACCTGAACCATGCTCCTTGCATCCAGAAAGCTGCTG...CTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp CCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAGCTGGGACTACAGGAAATCCCATGCTAGTTaGTGCCCCTTTGGACGTCTG +
Preference number: 4 (lower is better)
Translates to: PGFMPFSCCSLPSSWDYRKSHAS*CPFGRL
Trigger: CAGACGTCCAAAGGGGCAGCAACTAGCATGGGATTT...CCTGTAGTCCCAGCTACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCAAATCCCATGCTAGTTaGTGCCCCTTTGGACGTCTG +
Preference number: 4 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACKSHAS*CPFGRL
Trigger: CAGACGTCCAAAGGGGCAGCAACTAGCATGGGATTT...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp CACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAAAATCCCATGCTAGTTaGTGCCCCTTTGGACGTCTG +
Preference number: 4 (lower is better)
Translates to: HCKLHLPGLCHFPAAACRKSHAS*CPFGRL
Trigger: CAGACGTCCAAAGGGGCAGCAACTAGCATGGGATTT...TCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCTTTATGCCATTTTCCTaGTGCAGCCTGCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACFMPFS*CSLPSS
Trigger: GCTACTCGGCAGGCTGCAGCAGGAAAATGGCATAAA...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp TGCAAGGAGCATGGTTCAGGTCACAGGCCAGCTTCAAGAGAGCCGAGCGGAGCATTTATGCCATTTTCCTaGTGCAGCCTGCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: CKEHGSGHRPASREPSGAFMPFS*CSLPSS
Trigger: GCTACTCGGCAGGCTGCAGCAGGAAAATGGCATAAA...TGCTCCGCTCGGCTCTCTTGAAGCTGGCCTGTGACCTGAACCATGCTCCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR GCA 90 bp ACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGCCGTTTGTCTGGGGATaGATAGATGGACACCTTGAC +
Preference number: 4 (lower is better)
Translates to: TASSTSRVYAIFLLQPAEPFVWG*IDGHLD
Trigger: GTCAAGGTGTCCATCTATGCATCCCCAGACAAACGG...CTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp CACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGACATGCGTGCCTGGGTTaGCTCAAAATCTGTTACTGC +
Preference number: 4 (lower is better)
Translates to: HCKLHLPGLCHFPAAACRHACLG*LKICYC
Trigger: GCAGTAACAGATTTTGAGCCAACCCAGGCACGCATG...TCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCATGCGTGCCTGGGTTaGCTCAAAATCTGTTACTGC +
Preference number: 4 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACHACLG*LKICYC
Trigger: GCAGTAACAGATTTTGAGCCAACCCAGGCACGCATG...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCTGGGGATGCATAGATaGACACCTTTGGCATGTTGG +
Preference number: 4 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACLGMHR*TPLACW
Trigger: CCAACATGCCAAAGGTGTCCATCTATGCATCCCCAG...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379904.8
CDS-3UTR CCA 90 bp TTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGAGGTTGCCAAACCACTaGTGCGCCAGTTCATGGGCT +
Preference number: 4 (lower is better)
Translates to: FLAETGSHRVSQDGLHLLRLPNH*CASSWA
Trigger: AGCCCATGAACTGGCGCACCAGTGGTTTGGCAACCT...CAGGAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp CTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTCTGGATTCCATCCACTaGGAGAAGAGTTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LQAPPPGFMPFSCCSLPSLDSIH*EKSSAA
Trigger: AGCTGCTGAACTCTTCTCCCAGTGGATGGAATCCAG...ACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp TTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGGCCCCTTTGGACGTCTaGCAATCGCATGAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: FLAETGSHRVSQDGLHLLAPLDV*QSHEGE
Trigger: CTCTCCTTCATGCGATTGCCAGACGTCCAAAGGGGC...CAGGAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp ACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGGAATCTTCCTCTGACTaGAGGGTGGCATTCGTGATT +
Preference number: 4 (lower is better)
Translates to: TASSTSRVYAIFLLQPAEESSSD*RVAFVI
Trigger: AATCACGAATGCCACCCTTCAGTCAGAGGAAGATTC...CTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp CACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGAATCTTCCTCTGACTaGAGGGTGGCATTCGTGATT +
Preference number: 4 (lower is better)
Translates to: HCKLHLPGLCHFPAAACRESSSD*RVAFVI
Trigger: AATCACGAATGCCACCCTTCAGTCAGAGGAAGATTC...TCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp TGCAAGGAGCATGGTTCAGGTCACAGGCCAGCTTCAAGAGAGCCGAGCGGAGCAGAATCTTCCTCTGACTaGAGGGTGGCATTCGTGATT +
Preference number: 4 (lower is better)
Translates to: CKEHGSGHRPASREPSGAESSSD*RVAFVI
Trigger: AATCACGAATGCCACCCTTCAGTCAGAGGAAGATTC...TGCTCCGCTCGGCTCTCTTGAAGCTGGCCTGTGACCTGAACCATGCTCCTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR TCA 90 bp TCCTGGAAAACCCCCTGGAGGAAGCGCTCCTGTTGCAGTCGGAGTGAACACCCGGGGGTCAAAAAGCAGTaGCGTCTCCCTATATGTAAT +
Preference number: 4 (lower is better)
Translates to: SWKTPWRKRSCCSRSEHPGVKKQ*RLPICN
Trigger: ATTACATATAGGGAGACGTCACTGCTTTTTGACCCC...CGGGTGTTCACTCCGACTGCAACAGGAGCGCTTCCTCCAGGGGGTTTTCCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR TCA 90 bp CCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAGCTGGGACTACAGGTCCTTGGAAGAAAAGTaGGCTGTTGTGCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: PGFMPFSCCSLPSSWDYRSLEEK*AVVPEM
Trigger: CATCTCTGGCACAACAGCTCACTTTTCTTCCAAGGA...CCTGTAGTCCCAGCTACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCTGGTGTTACCCTGTTTaGCTTCATGCAGGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACWCYPV*LHAGSH
Trigger: ATGACTGCCTGCATGAAGTCAAACAGGGTAACACCA...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR GCA 90 bp CCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAGCTGGGACTACAGGAGTTCTTCATGGCACTaGACTGGCTCCAGTTATGTC +
Preference number: 4 (lower is better)
Translates to: PGFMPFSCCSLPSSWDYRSSSWH*TGSSYV
Trigger: GACATAACTGGAGCCAGTGCAGTGCCATGAAGAACT...CCTGTAGTCCCAGCTACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp ACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGCTCTGGAACCAGCAGTaGAATTTGTTCATGAGCAGG +
Preference number: 4 (lower is better)
Translates to: TASSTSRVYAIFLLQPAELWNQQ*NLFMSR
Trigger: CCTGCTCATGAACAAATTGCACTGCTGGTTCCAGAG...CTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCTCTGGAACCAGCAGTaGAATTTGTTCATGAGCAGG +
Preference number: 4 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACLWNQQ*NLFMSR
Trigger: CCTGCTCATGAACAAATTGCACTGCTGGTTCCAGAG...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp CACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGACATCTCTTTGACCTCTaGATTTTCCCCCAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: HCKLHLPGLCHFPAAACRHLFDL*IFPQKG
Trigger: GCCTTTCTGGGGGAAAATGCAGAGGTCAAAGAGATG...TCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCAAGGTAATTCCATCCTaGTGTTGTCTGAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACKVIPS*CCLSTH
Trigger: GTGGGTGCTCAGACAACAGCAGGATGGAATTACCTT...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp CCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAGCTGGGACTACAGGAAGGTAATTCCATCCTaGTGTTGTCTGAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: PGFMPFSCCSLPSSWDYRKVIPS*CCLSTH
Trigger: GTGGGTGCTCAGACAACAGCAGGATGGAATTACCTT...CCTGTAGTCCCAGCTACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp CACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGATTCATGGCACTGCACTaGCTCCAGTTATGTCACATG +
Preference number: 4 (lower is better)
Translates to: HCKLHLPGLCHFPAAACRFMALH*LQLCHM
Trigger: CATGTGACATAACTGGAGCCAGTGCAGTGCCATGAA...TCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCAAGCAGAAGAGGTCTTaGGGTCAAAAAGCAGTGACG +
Preference number: 4 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACKQKRS*GQKAVT
Trigger: CGTCACTGCTTTTTGACCCCAAGACCTCTTCTGCTT...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp CTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAGGGGGATTCCTTTCTaGAGAGTCCATGTAGTCATC +
Preference number: 4 (lower is better)
Translates to: LQAPPPGFMPFSCCSLPSRGIPF*RVHVVI
Trigger: GATGACTACATGGACTCTCCAGAAAGGAATCCCCCT...ACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp GTATTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCTGGATGCAAGGAGCATaGTTCAGGTCACAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VFLAETGSHRVSQDGLHLWMQGA*FRSQAS
Trigger: GCTGGCCTGTGACCTGAACCATGCTCCTTGCATCCA...GAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp CCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAGCTGGGACTACAGGTGGTGGCAAAGTCTCTaGTTTCCTGATCCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: PGFMPFSCCSLPSSWDYRWWQSL*FPDPCL
Trigger: AAGGCAAGGATCAGGAAACCAGAGACTTTGCCACCA...CCTGTAGTCCCAGCTACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CCA 90 bp CCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAGCTGGGACTACAGGATTGGGGCACATCCATaGCCACCCAAACTGTATTCT +
Preference number: 4 (lower is better)
Translates to: PGFMPFSCCSLPSSWDYRIGAHP*PPKLYS
Trigger: AGAATACAGTTTGGGTGGCCATGGATGTGCCCCAAT...CCTGTAGTCCCAGCTACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR TCA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCGGGGTCAAAAAGCAGTaGCGTCTCCCTATATGTAAT +
Preference number: 4 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACGVKKQ*RLPICN
Trigger: ATTACATATAGGGAGACGTCACTGCTTTTTGACCCC...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp CCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAGCTGGGACTACAGGGGGGTCAAAAAGCAGTaGCGTCTCCCTATATGTAAT +
Preference number: 4 (lower is better)
Translates to: PGFMPFSCCSLPSSWDYRGVKKQ*RLPICN
Trigger: ATTACATATAGGGAGACGTCACTGCTTTTTGACCCC...CCTGTAGTCCCAGCTACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp TGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAAACATTTCCTGTATTTaGGTCGGGGTTTCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: CKLHLPGLCHFPAAACRVNISCI*VGVSAG
Trigger: ACCAGCGGAAACCCCGACTCAAATACAGGAAATGTT...TACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp CTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTATCTTGGGATCCGAATaGCAAACTCCACCAGATGTA +
Preference number: 4 (lower is better)
Translates to: LQAPPPGFMPFSCCSLPSILGSE*QTPPDV
Trigger: TACATCTGGTGGAGTTTGTCATTCGGATCCCAAGAT...ACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp CACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGATTGTCACTCCAGCTTTaGCTGTCAATCACTGGCTTA +
Preference number: 4 (lower is better)
Translates to: HCKLHLPGLCHFPAAACRLSLQL*LSITGL
Trigger: TAAGCCAGTGATTGACAGGCAAAGCTGGAGTGACAA...TCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp TTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGCAGCAGCTTTCTGGATaGAAGGAGCATGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: FLAETGSHRVSQDGLHLLQQLSG*KEHGSG
Trigger: ACCTGAACCATGCTCCTTGCATCCAGAAAGCTGCTG...CAGGAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp CTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTACCACTCCATCATCATaGATCTTTTGGCTGGATACG +
Preference number: 4 (lower is better)
Translates to: LQAPPPGFMPFSCCSLPSTTPSS*IFWLDT
Trigger: CGTATCCAGCCAAAAGATGCATGATGATGGAGTGGT...ACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CCA 90 bp TTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGTCTCGTAGTTCTTCATaGCACTGCACTGGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: FLAETGSHRVSQDGLHLLSRSSS*HCTGSS
Trigger: ACTGGAGCCAGTGCAGTGCCATGAAGAACTACGAGA...CAGGAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCAGGCGTAAGTTTCTCTaGAACCAGCAGTGCAATTTG +
Preference number: 4 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACRRKFL*NQQCNL
Trigger: CAAATTGCACTGCTGGTTCCAGAGAAACTTACGCCT...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp TGCAAGGAGCATGGTTCAGGTCACAGGCCAGCTTCAAGAGAGCCGAGCGGAGCAAGGCGTAAGTTTCTCTaGAACCAGCAGTGCAATTTG +
Preference number: 4 (lower is better)
Translates to: CKEHGSGHRPASREPSGARRKFL*NQQCNL
Trigger: CAAATTGCACTGCTGGTTCCAGAGAAACTTACGCCT...TGCTCCGCTCGGCTCTCTTGAAGCTGGCCTGTGACCTGAACCATGCTCCTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR CCA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCTTGATTCCGTTTGTCTaGGGATGCATAGATGGACAC +
Preference number: 4 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACLIPFV*GCIDGH
Trigger: GTGTCCATCTATGCATCCCCAGACAAACGGAATCAA...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp TTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGCGTGGAGTAGGTCAATaGGATATGCCACAGGTACCT +
Preference number: 4 (lower is better)
Translates to: FLAETGSHRVSQDGLHLLRGVGQ*DMPQVP
Trigger: AGGTACCTGTGGCATATCCCATTGACCTACTCCACG...CAGGAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp TTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGCTGGATTCCATCCACTaGGAGAAGAGTTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: FLAETGSHRVSQDGLHLLLDSIH*EKSSAA
Trigger: AGCTGCTGAACTCTTCTCCCAGTGGATGGAATCCAG...CAGGAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp CTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTCATAGCGTGAAGCAATaGAGAAAGTCACTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LQAPPPGFMPFSCCSLPSHSVKQ*RKSLEA
Trigger: AGCCTCAAGTGACTTTCTCCATTGCTTCACGCTATG...ACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR TCA 90 bp CCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAGCTGGGACTACAGGGATGGCACTGAGAACTaGGAACAAATGCATATTTGG +
Preference number: 4 (lower is better)
Translates to: PGFMPFSCCSLPSSWDYRDGTEN*EQMHIW
Trigger: CCAAATATGCATTTGTTCTCAGTTCTCAGTGCCATC...CCTGTAGTCCCAGCTACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp CACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGAAGAAGGTAACGCTTaGGGTTTTCAGAGATATCTG +
Preference number: 4 (lower is better)
Translates to: HCKLHLPGLCHFPAAACREEGNA*GFQRYL
Trigger: CAGATATCTCTGAAAACCTCAAGCGTTACCTTCTTC...TCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp ACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGGAAGAAGGTAACGCTTaGGGTTTTCAGAGATATCTG +
Preference number: 4 (lower is better)
Translates to: TASSTSRVYAIFLLQPAEEEGNA*GFQRYL
Trigger: CAGATATCTCTGAAAACCTCAAGCGTTACCTTCTTC...CTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp AGTAACTCAGACCTTCGAGAAGTGCGGGGCTGCTTGTTTCATGTTGGAGGTAGTCGTCTGGCAATCGCATaGAGGAGAGCTGCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: SNSDLREVRGCLFHVGGSRLAIA*RRAAKF
Trigger: GAACTTGGCAGCTCTCCTTCATGCGATTGCCAGACG...ACTACCTCCAACATGAAACAAGCAGCCCCGCACTTCTCGAAGGTCTGAGTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR TCA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCTGTTGTGCCAGAGATaGTCATCCTTATGTCATATG +
Preference number: 4 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACLLCQR*SSLCHM
Trigger: CATATGACATAAGGATGATCATCTCTGGCACAACAG...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCTCCAGATGTGATCCTTaGGCCTCAAGAGATTCAAAA +
Preference number: 4 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACSRCDP*ASRDSK
Trigger: TTTTGAATCTCTTGAGGCTCAAGGATCACATCTGGA...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp TCCTGGAAAACCCCCTGGAGGAAGCGCTCCTGTTGCAGTCGGAGTGAACACCCGAAAAATATCCAGATGTaGTCCTTGAGCCTCAAGAGA +
Preference number: 4 (lower is better)
Translates to: SWKTPWRKRSCCSRSEHPKNIQM*SLSLKR
Trigger: TCTCTTGAGGCTCAAGGATCACATCTGGATATTTTT...CGGGTGTTCACTCCGACTGCAACAGGAGCGCTTCCTCCAGGGGGTTTTCCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR TCA 90 bp TGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTATTTCTTGTGTCTCTGTaGGGGCAGATTCGACTTCAT +
Preference number: 4 (lower is better)
Translates to: CKLHLPGLCHFPAAACRVFLVSL*GQIRLH
Trigger: ATGAAGTCGAATCTGCCCTCACAGAGACACAAGAAA...TACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR GCA 90 bp CTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTTTCGATCTTCTCAGATaGAACAAAGTCCAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: LQAPPPGFMPFSCCSLPSFDLLR*NKVQRG
Trigger: ACCTCTCTGGACTTTGTTGCATCTGAGAAGATCGAA...ACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp CACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGATTCGATCTTCTCAGATaGAACAAAGTCCAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: HCKLHLPGLCHFPAAACRFDLLR*NKVQRG
Trigger: ACCTCTCTGGACTTTGTTGCATCTGAGAAGATCGAA...TCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp TTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGCTCTGGAACCAGCAGTaGAATTTGTTCATGAGCAGG +
Preference number: 4 (lower is better)
Translates to: FLAETGSHRVSQDGLHLLLWNQQ*NLFMSR
Trigger: CCTGCTCATGAACAAATTGCACTGCTGGTTCCAGAG...CAGGAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp GATACTGAACTGGCCTTCCCCCACCACTCCATCATCATGCATCTTTTGGCTGGAAGGGAAAGCCATGCGTaGCTGGGTTGGCTCAAAATC +
Preference number: 4 (lower is better)
Translates to: DTELAFPHHSIIMHLLAGRESHA*LGWLKI
Trigger: GATTTTGAGCCAACCCAGGCACGCATGGCTTTCCCT...TCCAGCCAAAAGATGCATGATGATGGAGTGGTGGGGGAAGGCCAGTTCAGTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR GCA 90 bp TGCATCTTTTGGCTGGATACGATAGCTGAGAGCAGGCAGCTGCACTGCCTGATTCGAGAAGTGCGGGGCTaGTTGTTTCATGTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: CIFWLDTIAESRQLHCLIREVRG*LFHVGG
Trigger: ACCTCCAACATGAAACAAGCAGCCCCGCACTTCTCG...AATCAGGCAGTGCAGCTGCCTGCTCTCAGCTATCGTATCCAGCCAAAAGATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR GCA 90 bp GATACTGAACTGGCCTTCCCCCACCACTCCATCATCATGCATCTTTTGGCTGGACAGACCTTCGAGAAGTaGGGGGCTGCTTGTTTCATG +
Preference number: 4 (lower is better)
Translates to: DTELAFPHHSIIMHLLAGQTFEK*GAACFM
Trigger: CATGAAACAAGCAGCCCCGCACTTCTCGAAGGTCTG...TCCAGCCAAAAGATGCATGATGATGGAGTGGTGGGGGAAGGCCAGTTCAGTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR GCA 90 bp TTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGCGCATGAAGGAGAGCTaGCAAGTTCTGTGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: FLAETGSHRVSQDGLHLLRMKES*QVLCLD
Trigger: ATCAAGACACAGAACTTGGCAGCTCTCCTTCATGCG...CAGGAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp TCCTGGAAAACCCCCTGGAGGAAGCGCTCCTGTTGCAGTCGGAGTGAACACCCGGAACAAATGCATATTTaGGGCAAGATGGCTGTTAAG +
Preference number: 4 (lower is better)
Translates to: SWKTPWRKRSCCSRSEHPEQMHI*GKMAVK
Trigger: CTTAACAGCCATCTTGCCCCAAATATGCATTTGTTC...CGGGTGTTCACTCCGACTGCAACAGGAGCGCTTCCTCCAGGGGGTTTTCCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR CCA 90 bp CTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTTGCAAGATGATAAACTaGGTAGCATTGCTGACCAAG +
Preference number: 4 (lower is better)
Translates to: LQAPPPGFMPFSCCSLPSCKMIN*VALLTK
Trigger: CTTGGTCAGCAATGCTACCCAGTTTATCATCTTGCA...ACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp CCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAGCTGGGACTACAGGTGCAAGATGATAAACTaGGTAGCATTGCTGACCAAG +
Preference number: 4 (lower is better)
Translates to: PGFMPFSCCSLPSSWDYRCKMIN*VALLTK
Trigger: CTTGGTCAGCAATGCTACCCAGTTTATCATCTTGCA...CCTGTAGTCCCAGCTACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp TTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGAAAGCCATGCGTGCCTaGGTTGGCTCAAAATCTGTT +
Preference number: 4 (lower is better)
Translates to: FLAETGSHRVSQDGLHLLKAMRA*VGSKSV
Trigger: AACAGATTTTGAGCCAACCCAGGCACGCATGGCTTT...CAGGAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp GTATTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCGTGGAGTAGGTCAATaGGATATGCCACAGGTACCT +
Preference number: 4 (lower is better)
Translates to: VFLAETGSHRVSQDGLHLRGVGQ*DMPQVP
Trigger: AGGTACCTGTGGCATATCCCATTGACCTACTCCACG...GAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp AGTAACTCAGACCTTCGAGAAGTGCGGGGCTGCTTGTTTCATGTTGGAGGTAGTGCCCCTTTGGACGTCTaGCAATCGCATGAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: SNSDLREVRGCLFHVGGSAPLDV*QSHEGE
Trigger: CTCTCCTTCATGCGATTGCCAGACGTCCAAAGGGGC...ACTACCTCCAACATGAAACAAGCAGCCCCGCACTTCTCGAAGGTCTGAGTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR CCA 90 bp CTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTTCATCATGCATCTTTTaGCTGGATACGATAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LQAPPPGFMPFSCCSLPSSSCIF*LDTIAE
Trigger: CTCAGCTATCGTATCCAGCCAAAAGATGCATGATGA...ACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR TCA 90 bp CACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGATTGAAAAGTTGGCTTTaGACAACGGTTCATCAAAGC +
Preference number: 4 (lower is better)
Translates to: HCKLHLPGLCHFPAAACRLKSWL*TTVHQS
Trigger: GCTTTGATGAACCGTTGTTCAAAGCCAACTTTTCAA...TCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp TGCAAGGAGCATGGTTCAGGTCACAGGCCAGCTTCAAGAGAGCCGAGCGGAGCATTGAAAAGTTGGCTTTaGACAACGGTTCATCAAAGC +
Preference number: 4 (lower is better)
Translates to: CKEHGSGHRPASREPSGALKSWL*TTVHQS
Trigger: GCTTTGATGAACCGTTGTTCAAAGCCAACTTTTCAA...TGCTCCGCTCGGCTCTCTTGAAGCTGGCCTGTGACCTGAACCATGCTCCTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR TCA 90 bp TGCATCTTTTGGCTGGATACGATAGCTGAGAGCAGGCAGCTGCACTGCCTGATTCTGTTGCAGTCGGAGTaGACACCCGTCTTGTTTAAC +
Preference number: 4 (lower is better)
Translates to: CIFWLDTIAESRQLHCLILLQSE*TPVLFN
Trigger: GTTAAACAAGACGGGTGTTCACTCCGACTGCAACAG...AATCAGGCAGTGCAGCTGCCTGCTCTCAGCTATCGTATCCAGCCAAAAGATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR TCA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCTGATGCTTGCTCGTTaGCAAAGCATACAGAATTTT +
Preference number: 4 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACLMLAR*QSIQNF
Trigger: AAAATTCTGTATGCTTTGTCAACGAGCAAGCATCAG...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp CACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGACTGATGCTTGCTCGTTaGCAAAGCATACAGAATTTT +
Preference number: 4 (lower is better)
Translates to: HCKLHLPGLCHFPAAACRLMLAR*QSIQNF
Trigger: AAAATTCTGTATGCTTTGTCAACGAGCAAGCATCAG...TCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp AAGGAGCATGGTTCAGGTCACAGGCCAGCTTCAAGAGAGCCGAGCGGAGCATCCCTGATGCTTGCTCGTTaGCAAAGCATACAGAATTTT +
Preference number: 4 (lower is better)
Translates to: KEHGSGHRPASREPSGASLMLAR*QSIQNF
Trigger: AAAATTCTGTATGCTTTGTCAACGAGCAAGCATCAG...GGATGCTCCGCTCGGCTCTCTTGAAGCTGGCCTGTGACCTGAACCATGCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR TCA 90 bp ACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTTCAGTAACTTTTCCTaGTGCTTGCTCGTTGACAAA +
Preference number: 4 (lower is better)
Translates to: TASSTSRVYAIFLLQPAEFSNFS*CLLVDK
Trigger: TTTGTCAACGAGCAAGCATCAGGAAAAGTTACTGAA...CTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp CACATCATGAATCAGACCTACTCTGTCCTTAGGTCTGAGAAGTGTGTGGTTCTGATGGTCTCCATCTCCTaGCCTCGTGATCCGCCCTTC +
Preference number: 4 (lower is better)
Translates to: HIMNQTYSVLRSEKCVVLMVSIS*PRDPPF
Trigger: GAAGGGCGGATCACGAGGTCAGGAGATGGAGACCAT...CAGAACCACACACTTCTCAGACCTAAGGACAGAGTAGGTCTGATTCATGATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR TCA 90 bp TGCATCTTTTGGCTGGATACGATAGCTGAGAGCAGGCAGCTGCACTGCCTGATTGGCAGCTGCACTGCCTaGTTTCTTGAGACTTCTTGT +
Preference number: 4 (lower is better)
Translates to: CIFWLDTIAESRQLHCLIGSCTA*FLETSC
Trigger: ACAAGAAGTCTCAAGAAATCAGGCAGTGCAGCTGCC...AATCAGGCAGTGCAGCTGCCTGCTCTCAGCTATCGTATCCAGCCAAAAGATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR GCA 90 bp GTATTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCAGTTCTTCATGGCACTaGACTGGCTCCAGTTATGTC +
Preference number: 4 (lower is better)
Translates to: VFLAETGSHRVSQDGLHLSSSWH*TGSSYV
Trigger: GACATAACTGGAGCCAGTGCAGTGCCATGAAGAACT...GAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp CTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAGAACTGAGAACAAATaGATATTTGGGGCAAGATGG +
Preference number: 4 (lower is better)
Translates to: LQAPPPGFMPFSCCSLPSRTENK*IFGARW
Trigger: CCATCTTGCCCCAAATATGCATTTGTTCTCAGTTCT...ACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCAGAACTGAGAACAAATaGATATTTGGGGCAAGATGG +
Preference number: 4 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACRTENK*IFGARW
Trigger: CCATCTTGCCCCAAATATGCATTTGTTCTCAGTTCT...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp GTATTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCATCTCTTTGACCTCTaGATTTTCCCCCAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: VFLAETGSHRVSQDGLHLHLFDL*IFPQKG
Trigger: GCCTTTCTGGGGGAAAATGCAGAGGTCAAAGAGATG...GAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCACTTTTCCTGATGCTTaGTCGTTGACAAAGCATACA +
Preference number: 4 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACTFPDA*SLTKHT
Trigger: TGTATGCTTTGTCAACGAGCAAGCATCAGGAAAAGT...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp ACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGACTTTTCCTGATGCTTaGTCGTTGACAAAGCATACA +
Preference number: 4 (lower is better)
Translates to: TASSTSRVYAIFLLQPAETFPDA*SLTKHT
Trigger: TGTATGCTTTGTCAACGAGCAAGCATCAGGAAAAGT...CTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp AGTAAGTCATGTCAAGAGCTTTGTCTAGGGTCAGTCTCCCTGCACCAACTAGCTTCCCATGCTAGTTGCTaGCCCTTTGGACGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: SKSCQELCLGSVSLHQLASHASC*PFGRLA
Trigger: TGCCAGACGTCCAAAGGGGCAGCAACTAGCATGGGA...AGCTAGTTGGTGCAGGGAGACTGACCCTAGACAAAGCTCTTGACATGACTTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR CCA 90 bp GATACTGAACTGGCCTTCCCCCACCACTCCATCATCATGCATCTTTTGGCTGGATCTCGTAGTTCTTCATaGCACTGCACTGGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: DTELAFPHHSIIMHLLAGSRSSS*HCTGSS
Trigger: ACTGGAGCCAGTGCAGTGCCATGAAGAACTACGAGA...TCCAGCCAAAAGATGCATGATGATGGAGTGGTGGGGGAAGGCCAGTTCAGTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CCA 90 bp AGTAAGTCATGTCAAGAGCTTTGTCTAGGGTCAGTCTCCCTGCACCAACTAGCTCCCATTAGTGGCTACTaGGAAAGCCCCAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: SKSCQELCLGSVSLHQLAPISGY*ESPRIL
Trigger: GAGGATCCTGGGGCTTTCCCAGTAGCCACTAATGGG...AGCTAGTTGGTGCAGGGAGACTGACCCTAGACAAAGCTCTTGACATGACTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR CCA 90 bp TTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGAGGCGTAAGTTTCTCTaGAACCAGCAGTGCAATTTG +
Preference number: 4 (lower is better)
Translates to: FLAETGSHRVSQDGLHLLRRKFL*NQQCNL
Trigger: CAAATTGCACTGCTGGTTCCAGAGAAACTTACGCCT...CAGGAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp TGTTGCAGTCGGAGTGAACACCCGTCTTGTTTAACCACCAGCAGGGGGATTCCTAAAGCCATGCGTGCCTaGGTTGGCTCAAAATCTGTT +
Preference number: 4 (lower is better)
Translates to: CCSRSEHPSCLTTSRGIPKAMRA*VGSKSV
Trigger: AACAGATTTTGAGCCAACCCAGGCACGCATGGCTTT...AGGAATCCCCCTGCTGGTGGTTAAACAAGACGGGTGTTCACTCCGACTGCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR CCA 90 bp GTATTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCAAGCAGAAGAGGTCTTaGGGTCAAAAAGCAGTGACG +
Preference number: 4 (lower is better)
Translates to: VFLAETGSHRVSQDGLHLKQKRS*GQKAVT
Trigger: CGTCACTGCTTTTTGACCCCAAGACCTCTTCTGCTT...GAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp ACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTGTTACTTGTCATCTTaGGATCCGAATGACAAACTC +
Preference number: 4 (lower is better)
Translates to: TASSTSRVYAIFLLQPAECYLSS*DPNDKL
Trigger: GAGTTTGTCATTCGGATCCCAAGATGACAAGTAACA...CTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp CTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTTGTTACTTGTCATCTTaGGATCCGAATGACAAACTC +
Preference number: 4 (lower is better)
Translates to: LQAPPPGFMPFSCCSLPSCYLSS*DPNDKL
Trigger: GAGTTTGTCATTCGGATCCCAAGATGACAAGTAACA...ACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp GTATTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCAGGGGGATTCCTTTCTaGAGAGTCCATGTAGTCATC +
Preference number: 4 (lower is better)
Translates to: VFLAETGSHRVSQDGLHLRGIPF*RVHVVI
Trigger: GATGACTACATGGACTCTCCAGAAAGGAATCCCCCT...GAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp GATACTGAACTGGCCTTCCCCCACCACTCCATCATCATGCATCTTTTGGCTGGACTGGATTCCATCCACTaGGAGAAGAGTTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: DTELAFPHHSIIMHLLAGLDSIH*EKSSAA
Trigger: AGCTGCTGAACTCTTCTCCCAGTGGATGGAATCCAG...TCCAGCCAAAAGATGCATGATGATGGAGTGGTGGGGGAAGGCCAGTTCAGTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR TCA 90 bp CCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAGCTGGGACTACAGGCATTGGTTTTCTGTGTaGATTAACCATTGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: PGFMPFSCCSLPSSWDYRHWFSV*INHCRR
Trigger: TCTTCTGCAATGGTTAATTCACACAGAAAACCAATG...CCTGTAGTCCCAGCTACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp GTATTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCGAAGGGTGGCATTCGTaGTTTCAAGATCTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: VFLAETGSHRVSQDGLHLEGWHS*FQDLCC
Trigger: ACAGCAAAGATCTTGAAATCACGAATGCCACCCTTC...GAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp GTATTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCATCTTGGGATCCGAATaGCAAACTCCACCAGATGTA +
Preference number: 4 (lower is better)
Translates to: VFLAETGSHRVSQDGLHLILGSE*QTPPDV
Trigger: TACATCTGGTGGAGTTTGTCATTCGGATCCCAAGAT...GAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp TTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGCTGTTGTGCCAGAGATaGTCATCCTTATGTCATATG +
Preference number: 4 (lower is better)
Translates to: FLAETGSHRVSQDGLHLLLLCQR*SSLCHM
Trigger: CATATGACATAAGGATGATCATCTCTGGCACAACAG...CAGGAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp TTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGGCAGGCAGTCATGTCTaGTGTACCTTTTCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: FLAETGSHRVSQDGLHLLAGSHV*CTFSFL
Trigger: AAGAAAAGAAAAGGTACATCAGACATGACTGCCTGC...CAGGAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR TCA 90 bp TGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAACTGTATTCTATCTCTaGCTGTGGCATCAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: CKLHLPGLCHFPAAACRVTVFYL*LWHQRK
Trigger: CTTTCTTTGATGCCACAGTCAGAGATAGAATACAGT...TACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR GCA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCTCAAGATCTTTGCTGTaGAAGATGATAAACTGGGTA +
Preference number: 4 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACSRSLL*KMINWV
Trigger: TACCCAGTTTATCATCTTGCACAGCAAAGATCTTGA...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp TTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGTTGGATAGTGCAATATaGCTGCTCTCTCTTCGTATC +
Preference number: 4 (lower is better)
Translates to: FLAETGSHRVSQDGLHLLLDSAI*LLSLRI
Trigger: GATACGAAGAGAGAGCAGGCATATTGCACTATCCAA...CAGGAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp CCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAGCTGGGACTACAGGAAGTTCCATGTATTTTaGAAAACCCTCCTTAAGCCA +
Preference number: 4 (lower is better)
Translates to: PGFMPFSCCSLPSSWDYRKFHVF*KTLLKP
Trigger: TGGCTTAAGGAGGGTTTTGCAAAATACATGGAACTT...CCTGTAGTCCCAGCTACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp CCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAGCTGGGACTACAGGAACTATTTGACAGACTaGTCCACAAGTCATCATTCT +
Preference number: 4 (lower is better)
Translates to: PGFMPFSCCSLPSSWDYRNYLTD*STSHHS
Trigger: AGAATGATGACTTGTGGAGCAGTCTGTCAAATAGTT...CCTGTAGTCCCAGCTACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp AGTAAGTCATGTCAAGAGCTTTGTCTAGGGTCAGTCTCCCTGCACCAACTAGCTCGAGAAGTGCGGGGCTaGTTGTTTCATGTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: SKSCQELCLGSVSLHQLAREVRG*LFHVGG
Trigger: ACCTCCAACATGAAACAAGCAGCCCCGCACTTCTCG...AGCTAGTTGGTGCAGGGAGACTGACCCTAGACAAAGCTCTTGACATGACTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR GCA 90 bp GTATTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCTTGTCACTCCAGCTTTaGCTGTCAATCACTGGCTTA +
Preference number: 4 (lower is better)
Translates to: VFLAETGSHRVSQDGLHLLSLQL*LSITGL
Trigger: TAAGCCAGTGATTGACAGGCAAAGCTGGAGTGACAA...GAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp TGCATCTTTTGGCTGGATACGATAGCTGAGAGCAGGCAGCTGCACTGCCTGATTCGCATGAAGGAGAGCTaGCAAGTTCTGTGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: CIFWLDTIAESRQLHCLIRMKES*QVLCLD
Trigger: ATCAAGACACAGAACTTGGCAGCTCTCCTTCATGCG...AATCAGGCAGTGCAGCTGCCTGCTCTCAGCTATCGTATCCAGCCAAAAGATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR GCA 90 bp GATACTGAACTGGCCTTCCCCCACCACTCCATCATCATGCATCTTTTGGCTGGACCCTGTTTGACTTCATaGAGGCAGTCATGTCTGATG +
Preference number: 4 (lower is better)
Translates to: DTELAFPHHSIIMHLLAGPCLTS*RQSCLM
Trigger: CATCAGACATGACTGCCTGCATGAAGTCAAACAGGG...TCCAGCCAAAAGATGCATGATGATGGAGTGGTGGGGGAAGGCCAGTTCAGTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CCA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCATATTTGGGGCAAGATaGCTGTTAAGCAGTAAAATC +
Preference number: 4 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACIFGAR*LLSSKI
Trigger: GATTTTACTGCTTAACAGCCATCTTGCCCCAAATAT...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp CCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAGCTGGGACTACAGGATATTTGGGGCAAGATaGCTGTTAAGCAGTAAAATC +
Preference number: 4 (lower is better)
Translates to: PGFMPFSCCSLPSSWDYRIFGAR*LLSSKI
Trigger: GATTTTACTGCTTAACAGCCATCTTGCCCCAAATAT...CCTGTAGTCCCAGCTACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp GTATTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCACACCTTTGGCATGTTaGATAGTGCAATATGCCTGC +
Preference number: 4 (lower is better)
Translates to: VFLAETGSHRVSQDGLHLTPLAC*IVQYAC
Trigger: GCAGGCATATTGCACTATCCAACATGCCAAAGGTGT...GAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379904.8
CDS-3UTR CCA 90 bp GTATTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCTTGATTCCGTTTGTCTaGGGATGCATAGATGGACAC +
Preference number: 4 (lower is better)
Translates to: VFLAETGSHRVSQDGLHLLIPFV*GCIDGH
Trigger: GTGTCCATCTATGCATCCCCAGACAAACGGAATCAA...GAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp CCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAGCTGGGACTACAGGTTGCCTGTCAATCACTaGCTTAAAATACTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: PGFMPFSCCSLPSSWDYRLPVNH*LKILKK
Trigger: CTTCTTCAGTATTTTAAGCCAGTGATTGACAGGCAA...CCTGTAGTCCCAGCTACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp TGGAGAGTCCATGTAGTCATCATCTCTTTGACCTCTGCATTTTCCCCCAGAAAGTGGATGCAAGGAGCATaGTTCAGGTCACAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: WRVHVVIISLTSAFSPRKWMQGA*FRSQAS
Trigger: GCTGGCCTGTGACCTGAACCATGCTCCTTGCATCCA...CTTTCTGGGGGAAAATGCAGAGGTCAAAGAGATGATGACTACATGGACTCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR CCA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCTATTTAATTTTCCACTaGATTCCATCCACTGGGAGA +
Preference number: 4 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACYLIFH*IPSTGR
Trigger: TCTCCCAGTGGATGGAATCCAGTGGAAAATTAAATA...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379904.8
ENST00000437043.8
CDS-3UTR CCA 90 bp TGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTACTTGCAACTTATCCTTaGAAGAAAAGTGAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: CKLHLPGLCHFPAAACRVLATYP*KKSELL
Trigger: CAACAGCTCACTTTTCTTCCAAGGATAAGTTGCAAG...TACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp ACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGGGACGTAAAACTGGTTaGGCAAACTATAGAATACTA +
Preference number: 4 (lower is better)
Translates to: TASSTSRVYAIFLLQPAEGRKTG*ANYRIL
Trigger: TAGTATTCTATAGTTTGCCCAACCAGTTTTACGTCC...CTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437043.8
3UTR CAA 72 bp TTTCTCTTACAAAATCCCATGCTAGTTGCTGCCCCTTaGGACGTCTGGCAATCGCATGAAGGAGAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: FLLQNPMLVAAP*DVWQSHEGELP
Trigger: TGGCAGCTCTCCTTCATGCGATTGCCAGACGTCCAAAGGGGCAGCAACTAGCATGGGATTTTGTAAGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR TCA 90 bp TTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGTTCAGTAACTTTTCCTaGTGCTTGCTCGTTGACAAA +
Preference number: 4 (lower is better)
Translates to: FLAETGSHRVSQDGLHLLFSNFS*CLLVDK
Trigger: TTTGTCAACGAGCAAGCATCAGGAAAAGTTACTGAA...CAGGAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp GTATTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCACTGCCTGATTTCTTaGGACTTCTTGTTGGTTAGA +
Preference number: 4 (lower is better)
Translates to: VFLAETGSHRVSQDGLHLHCLIS*DFLLVR
Trigger: TCTAACCAACAAGAAGTCTCAAGAAATCAGGCAGTG...GAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR TCA 90 bp TGCATCTTTTGGCTGGATACGATAGCTGAGAGCAGGCAGCTGCACTGCCTGATTAATAGTGGCATAGCGTaGAGCAATGGAGAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: CIFWLDTIAESRQLHCLINSGIA*SNGESH
Trigger: GTGACTTTCTCCATTGCTTCACGCTATGCCACTATT...AATCAGGCAGTGCAGCTGCCTGCTCTCAGCTATCGTATCCAGCCAAAAGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR TCA 90 bp TGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTACCTTTTGTATCTCTGTaGGGGCAGATTTATTCATTT +
Preference number: 4 (lower is better)
Translates to: CKLHLPGLCHFPAAACRVPFVSL*GQIYSF
Trigger: AAATGAATAAATCTGCCCTCACAGAGATACAAAAGG...TACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR TCA 90 bp TGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTACGACTTCATTTGGAATaGTCTCAAAAATCTACCCTT +
Preference number: 4 (lower is better)
Translates to: CKLHLPGLCHFPAAACRVRLHLE*SQKSTL
Trigger: AAGGGTAGATTTTTGAGATCATTCCAAATGAAGTCG...TACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR GCA 90 bp GTATTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCTTCGATCTTCTCAGATaGAACAAAGTCCAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: VFLAETGSHRVSQDGLHLFDLLR*NKVQRG
Trigger: ACCTCTCTGGACTTTGTTGCATCTGAGAAGATCGAA...GAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp TGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTATCAAGATCTTTGCTGTaGAAGATGATAAACTGGGTA +
Preference number: 4 (lower is better)
Translates to: CKLHLPGLCHFPAAACRVSRSLL*KMINWV
Trigger: TACCCAGTTTATCATCTTGCACAGCAAAGATCTTGA...TACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp TGGAGAGTCCATGTAGTCATCATCTCTTTGACCTCTGCATTTTCCCCCAGAAAGTTGCCAAACCACTGGTaGGCCAGTTCATGGGCTATG +
Preference number: 4 (lower is better)
Translates to: WRVHVVIISLTSAFSPRKLPNHW*ASSWAM
Trigger: CATAGCCCATGAACTGGCGCACCAGTGGTTTGGCAA...CTTTCTGGGGGAAAATGCAGAGGTCAAAGAGATGATGACTACATGGACTCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR CCA 90 bp TTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGGAACAAATGCATATTTaGGGCAAGATGGCTGTTAAG +
Preference number: 4 (lower is better)
Translates to: FLAETGSHRVSQDGLHLLEQMHI*GKMAVK
Trigger: CTTAACAGCCATCTTGCCCCAAATATGCATTTGTTC...CAGGAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp CCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAGCTGGGACTACAGGATCCAGTTTGGAGAGTaGATAGTAGATATCAAAGTA +
Preference number: 4 (lower is better)
Translates to: PGFMPFSCCSLPSSWDYRIQFGE*IVDIKV
Trigger: TACTTTGATATCTACTATCCACTCTCCAAACTGGAT...CCTGTAGTCCCAGCTACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp CACTTTCCCCTCTTGACCCAACATCCCAAGTCTTCCTTAATAATGCAAACATCATCCTGGAAAACCCCCTaGAGGAAGCGCTCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: HFPLLTQHPKSSLIMQTSSWKTP*RKRSCC
Trigger: GCAACAGGAGCGCTTCCTCCAGGGGGTTTTCCAGGA...TGATGTTTGCATTATTAAGGAAGACTTGGGATGTTGGGTCAAGAGGGGAAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CCA 90 bp AGTAAGTCATGTCAAGAGCTTTGTCTAGGGTCAGTCTCCCTGCACCAACTAGCTCGTGGAGTAGGTCAATaGGATATGCCACAGGTACCT +
Preference number: 4 (lower is better)
Translates to: SKSCQELCLGSVSLHQLARGVGQ*DMPQVP
Trigger: AGGTACCTGTGGCATATCCCATTGACCTACTCCACG...AGCTAGTTGGTGCAGGGAGACTGACCCTAGACAAAGCTCTTGACATGACTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR CCA 90 bp TTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGCTTGCAACTTATCCTTaGAAGAAAAGTGAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: FLAETGSHRVSQDGLHLLLATYP*KKSELL
Trigger: CAACAGCTCACTTTTCTTCCAAGGATAAGTTGCAAG...CAGGAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp ACCCTGTTTGACTTCATGCAGGCAGTCATGTCTGATGTACCTTTTCTTTTCTTTAGCCTGCCGAGTAGCTaGGACTACAGGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: TLFDFMQAVMSDVPFLFFSLPSS*DYRHLP
Trigger: TGGCAGGTGCCTGTAGTCCCAGCTACTCGGCAGGCT...AAAGAAAAGAAAAGGTACATCAGACATGACTGCCTGCATGAAGTCAAACAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CCA 90 bp CCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAGCTGGGACTACAGGCTTGAGACTTCTTGTTaGTTAGACAAAATATCCACA +
Preference number: 4 (lower is better)
Translates to: PGFMPFSCCSLPSSWDYRLETSC*LDKIST
Trigger: TGTGGATATTTTGTCTAACCAACAAGAAGTCTCAAG...CCTGTAGTCCCAGCTACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437043.8
3UTR CAA 72 bp CCAAGTAACTCAGACCTTCGAGAAGTGCGGGGCTGCTaGTTTCATGTTGGAGGTAGTAAGTCATGTCAAGAG +
Preference number: 4 (lower is better)
Translates to: PSNSDLREVRGC*FHVGGSKSCQE
Trigger: CTCTTGACATGACTTACTACCTCCAACATGAAACAAGCAGCCCCGCACTTCTCGAAGGTCTGAGTTACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR TCA 90 bp ACCCTGTTTGACTTCATGCAGGCAGTCATGTCTGATGTACCTTTTCTTTTCTTTCATCCTGTCCCAGACTaGGCCCTTGTCACTCCAGCT +
Preference number: 4 (lower is better)
Translates to: TLFDFMQAVMSDVPFLFFHPVPD*ALVTPA
Trigger: AGCTGGAGTGACAAGGGCTCAGTCTGGGACAGGATG...AAAGAAAAGAAAAGGTACATCAGACATGACTGCCTGCATGAAGTCAAACAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR TCA 90 bp AGTAAGTCATGTCAAGAGCTTTGTCTAGGGTCAGTCTCCCTGCACCAACTAGCTTCCTTGGAAGAAAAGTaGGCTGTTGTGCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: SKSCQELCLGSVSLHQLASLEEK*AVVPEM
Trigger: CATCTCTGGCACAACAGCTCACTTTTCTTCCAAGGA...AGCTAGTTGGTGCAGGGAGACTGACCCTAGACAAAGCTCTTGACATGACTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR TCA 90 bp GTATTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCAAAAATATCCAGATGTaGTCCTTGAGCCTCAAGAGA +
Preference number: 4 (lower is better)
Translates to: VFLAETGSHRVSQDGLHLKNIQM*SLSLKR
Trigger: TCTCTTGAGGCTCAAGGATCACATCTGGATATTTTT...GAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR TCA 90 bp ACCCTGTTTGACTTCATGCAGGCAGTCATGTCTGATGTACCTTTTCTTTTCTTTGCTGGATACGATAGCTaGGAGCAGGCAGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: TLFDFMQAVMSDVPFLFFAGYDS*EQAAAL
Trigger: CAGTGCAGCTGCCTGCTCTCAGCTATCGTATCCAGC...AAAGAAAAGAAAAGGTACATCAGACATGACTGCCTGCATGAAGTCAAACAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR GCA 90 bp TTTCCCCTCTTGACCCAACATCCCAAGTCTTCCTTAATAATGCAAACATCAGTCAGCAAGGGAAAGCCATaGGTGCCTGGGTTGGCTCAA +
Preference number: 4 (lower is better)
Translates to: FPLLTQHPKSSLIMQTSVSKGKP*VPGLAQ
Trigger: TTGAGCCAACCCAGGCACGCATGGCTTTCCCTTGCT...GACTGATGTTTGCATTATTAAGGAAGACTTGGGATGTTGGGTCAAGAGGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR GCA 90 bp GATACTGAACTGGCCTTCCCCCACCACTCCATCATCATGCATCTTTTGGCTGGATTGGATAGTGCAATATaGCTGCTCTCTCTTCGTATC +
Preference number: 4 (lower is better)
Translates to: DTELAFPHHSIIMHLLAGLDSAI*LLSLRI
Trigger: GATACGAAGAGAGAGCAGGCATATTGCACTATCCAA...TCCAGCCAAAAGATGCATGATGATGGAGTGGTGGGGGAAGGCCAGTTCAGTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR GCA 90 bp TTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGAAGTTCCATGTATTTTaGAAAACCCTCCTTAAGCCA +
Preference number: 4 (lower is better)
Translates to: FLAETGSHRVSQDGLHLLKFHVF*KTLLKP
Trigger: TGGCTTAAGGAGGGTTTTGCAAAATACATGGAACTT...CAGGAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR GCA 90 bp AGTAAGTCATGTCAAGAGCTTTGTCTAGGGTCAGTCTCCCTGCACCAACTAGCTCGCATGAAGGAGAGCTaGCAAGTTCTGTGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: SKSCQELCLGSVSLHQLARMKES*QVLCLD
Trigger: ATCAAGACACAGAACTTGGCAGCTCTCCTTCATGCG...AGCTAGTTGGTGCAGGGAGACTGACCCTAGACAAAGCTCTTGACATGACTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR CCA 90 bp CACTTTCCCCTCTTGACCCAACATCCCAAGTCTTCCTTAATAATGCAAACATCACCCATTAGTGGCTACTaGGAAAGCCCCAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: HFPLLTQHPKSSLIMQTSPISGY*ESPRIL
Trigger: GAGGATCCTGGGGCTTTCCCAGTAGCCACTAATGGG...TGATGTTTGCATTATTAAGGAAGACTTGGGATGTTGGGTCAAGAGGGGAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CCA 90 bp TGGAGAGTCCATGTAGTCATCATCTCTTTGACCTCTGCATTTTCCCCCAGAAAGCATGCGTGCCTGGGTTaGCTCAAAATCTGTTACTGC +
Preference number: 4 (lower is better)
Translates to: WRVHVVIISLTSAFSPRKHACLG*LKICYC
Trigger: GCAGTAACAGATTTTGAGCCAACCCAGGCACGCATG...CTTTCTGGGGGAAAATGCAGAGGTCAAAGAGATGATGACTACATGGACTCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR CCA 90 bp TGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAATCCAGTTTGGAGAGTaGATAGTAGATATCAAAGTA +
Preference number: 4 (lower is better)
Translates to: CKLHLPGLCHFPAAACRVIQFGE*IVDIKV
Trigger: TACTTTGATATCTACTATCCACTCTCCAAACTGGAT...TACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp GTATTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCTGTTACTTGTCATCTTaGGATCCGAATGACAAACTC +
Preference number: 4 (lower is better)
Translates to: VFLAETGSHRVSQDGLHLCYLSS*DPNDKL
Trigger: GAGTTTGTCATTCGGATCCCAAGATGACAAGTAACA...GAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp AGTAAGTCATGTCAAGAGCTTTGTCTAGGGTCAGTCTCCCTGCACCAACTAGCTAGGGGGATTCCTTTCTaGAGAGTCCATGTAGTCATC +
Preference number: 4 (lower is better)
Translates to: SKSCQELCLGSVSLHQLARGIPF*RVHVVI
Trigger: GATGACTACATGGACTCTCCAGAAAGGAATCCCCCT...AGCTAGTTGGTGCAGGGAGACTGACCCTAGACAAAGCTCTTGACATGACTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR CCA 90 bp TTTCATGTTGGAGGTAGTAAGTCATGTCAAGAGCTTTGTCTAGGGTCAGTCTCCCATTCAGGGTCTTCCTaGAAAACCCCCTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: FHVGGSKSCQELCLGSVSHSGSS*KTPWRK
Trigger: CTTCCTCCAGGGGGTTTTCCAGGAAGACCCTGAATG...GGAGACTGACCCTAGACAAAGCTCTTGACATGACTTACTACCTCCAACATGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR TCA 90 bp CACATCATGAATCAGACCTACTCTGTCCTTAGGTCTGAGAAGTGTGTGGTTCTGAACATTTCCTGTATTTaGGTCGGGGTTTCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: HIMNQTYSVLRSEKCVVLNISCI*VGVSAG
Trigger: ACCAGCGGAAACCCCGACTCAAATACAGGAAATGTT...CAGAACCACACACTTCTCAGACCTAAGGACAGAGTAGGTCTGATTCATGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR TCA 90 bp TGCATCTTTTGGCTGGATACGATAGCTGAGAGCAGGCAGCTGCACTGCCTGATTACAGTAGTTTCAAAGTaGTCTTCCAAAAGACCTCCT +
Preference number: 4 (lower is better)
Translates to: CIFWLDTIAESRQLHCLITVVSK*SSKRPP
Trigger: AGGAGGTCTTTTGGAAGATCACTTTGAAACTACTGT...AATCAGGCAGTGCAGCTGCCTGCTCTCAGCTATCGTATCCAGCCAAAAGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR TCA 90 bp CACTTTCCCCTCTTGACCCAACATCCCAAGTCTTCCTTAATAATGCAAACATCACCACAGCTCTTGACTTaGGCTTCACTGGTGTTACCC +
Preference number: 4 (lower is better)
Translates to: HFPLLTQHPKSSLIMQTSPQLLT*ASLVLP
Trigger: GGGTAACACCAGTGAAGCTCAAGTCAAGAGCTGTGG...TGATGTTTGCATTATTAAGGAAGACTTGGGATGTTGGGTCAAGAGGGGAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR GCA 90 bp TGTTGCAGTCGGAGTGAACACCCGTCTTGTTTAACCACCAGCAGGGGGATTCCTAAGTTCCATGTATTTTaGAAAACCCTCCTTAAGCCA +
Preference number: 4 (lower is better)
Translates to: CCSRSEHPSCLTTSRGIPKFHVF*KTLLKP
Trigger: TGGCTTAAGGAGGGTTTTGCAAAATACATGGAACTT...AGGAATCCCCCTGCTGGTGGTTAAACAAGACGGGTGTTCACTCCGACTGCAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR GCA 90 bp ACAGAAGTCTACATCTACTTTAATTTTCCACTGGATTCCATCCACTGGGAGAAGTTTCCTGCTGCAGCCTaGCGAGTAGCTGGGACTACA +
Preference number: 4 (lower is better)
Translates to: TEVYIYFNFPLDSIHWEKFPAAA*RVAGTT
Trigger: TGTAGTCCCAGCTACTCGGCAGGCTGCAGCAGGAAA...CTTCTCCCAGTGGATGGAATCCAGTGGAAAATTAAAGTAGATGTAGACTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR CCA 90 bp TGGAGAGTCCATGTAGTCATCATCTCTTTGACCTCTGCATTTTCCCCCAGAAAGTTCATGGCACTGCACTaGCTCCAGTTATGTCACATG +
Preference number: 4 (lower is better)
Translates to: WRVHVVIISLTSAFSPRKFMALH*LQLCHM
Trigger: CATGTGACATAACTGGAGCCAGTGCAGTGCCATGAA...CTTTCTGGGGGAAAATGCAGAGGTCAAAGAGATGATGACTACATGGACTCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR CCA 90 bp GTATTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCTATTTAATTTTCCACTaGATTCCATCCACTGGGAGA +
Preference number: 4 (lower is better)
Translates to: VFLAETGSHRVSQDGLHLYLIFH*IPSTGR
Trigger: TCTCCCAGTGGATGGAATCCAGTGGAAAATTAAATA...GAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379904.8
ENST00000437043.8
CDS-3UTR CCA 90 bp TTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGCAGAGACCATTCATTTaGAATGCTCTCAAAAATCTA +
Preference number: 4 (lower is better)
Translates to: FLAETGSHRVSQDGLHLLQRPFI*NALKNL
Trigger: TAGATTTTTGAGAGCATTCCAAATGAATGGTCTCTG...CAGGAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR TCA 90 bp GATACTGAACTGGCCTTCCCCCACCACTCCATCATCATGCATCTTTTGGCTGGACATTGGTTTTCTGTGTaGATTAACCATTGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: DTELAFPHHSIIMHLLAGHWFSV*INHCRR
Trigger: TCTTCTGCAATGGTTAATTCACACAGAAAACCAATG...TCCAGCCAAAAGATGCATGATGATGGAGTGGTGGGGGAAGGCCAGTTCAGTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR TCA 90 bp AGTAAGTCATGTCAAGAGCTTTGTCTAGGGTCAGTCTCCCTGCACCAACTAGCTGATGGCACTGAGAACTaGGAACAAATGCATATTTGG +
Preference number: 4 (lower is better)
Translates to: SKSCQELCLGSVSLHQLADGTEN*EQMHIW
Trigger: CCAAATATGCATTTGTTCTCAGTTCTCAGTGCCATC...AGCTAGTTGGTGCAGGGAGACTGACCCTAGACAAAGCTCTTGACATGACTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR TCA 90 bp CACTTTCCCCTCTTGACCCAACATCCCAAGTCTTCCTTAATAATGCAAACATCACATCCTGCTGTTGTCTaGGCACCCACAGAATACACA +
Preference number: 4 (lower is better)
Translates to: HFPLLTQHPKSSLIMQTSHPAVV*APTEYT
Trigger: TGTGTATTCTGTGGGTGCTCAGACAACAGCAGGATG...TGATGTTTGCATTATTAAGGAAGACTTGGGATGTTGGGTCAAGAGGGGAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR TCA 90 bp AGTAACTCAGACCTTCGAGAAGTGCGGGGCTGCTTGTTTCATGTTGGAGGTAGTTTCAGTAACTTTTCCTaGTGCTTGCTCGTTGACAAA +
Preference number: 4 (lower is better)
Translates to: SNSDLREVRGCLFHVGGSFSNFS*CLLVDK
Trigger: TTTGTCAACGAGCAAGCATCAGGAAAAGTTACTGAA...ACTACCTCCAACATGAAACAAGCAGCCCCGCACTTCTCGAAGGTCTGAGTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR TCA 90 bp AGTAAGTCATGTCAAGAGCTTTGTCTAGGGTCAGTCTCCCTGCACCAACTAGCTCTGTTGTGCCAGAGATaGTCATCCTTATGTCATATG +
Preference number: 4 (lower is better)
Translates to: SKSCQELCLGSVSLHQLALLCQR*SSLCHM
Trigger: CATATGACATAAGGATGATCATCTCTGGCACAACAG...AGCTAGTTGGTGCAGGGAGACTGACCCTAGACAAAGCTCTTGACATGACTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR TCA 90 bp AGTAAGTCATGTCAAGAGCTTTGTCTAGGGTCAGTCTCCCTGCACCAACTAGCTTCCAGATGTGATCCTTaGGCCTCAAGAGATTCAAAA +
Preference number: 4 (lower is better)
Translates to: SKSCQELCLGSVSLHQLASRCDP*ASRDSK
Trigger: TTTTGAATCTCTTGAGGCTCAAGGATCACATCTGGA...AGCTAGTTGGTGCAGGGAGACTGACCCTAGACAAAGCTCTTGACATGACTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR GCA 90 bp AGAGCTGCCAAGTTCTGTGTCTTGATAACCTTTCCTTCCATTCCTAGTTCAATTAGGGAAAGCCATGCGTaGCTGGGTTGGCTCAAAATC +
Preference number: 4 (lower is better)
Translates to: RAAKFCVLITFPSIPSSIRESHA*LGWLKI
Trigger: GATTTTGAGCCAACCCAGGCACGCATGGCTTTCCCT...AATTGAACTAGGAATGGAAGGAAAGGTTATCAAGACACAGAACTTGGCAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR GCA 90 bp CACTTTCCCCTCTTGACCCAACATCCCAAGTCTTCCTTAATAATGCAAACATCATTTATGCCATTTTCCTaGTGCAGCCTGCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: HFPLLTQHPKSSLIMQTSFMPFS*CSLPSS
Trigger: GCTACTCGGCAGGCTGCAGCAGGAAAATGGCATAAA...TGATGTTTGCATTATTAAGGAAGACTTGGGATGTTGGGTCAAGAGGGGAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR GCA 90 bp TTGCAACTTATCCTTGGAAGAAAAGTGAGCTGTTGTGCCAGAGATGATCATCCTCCGTTTGTCTGGGGATaGATAGATGGACACCTTGAC +
Preference number: 4 (lower is better)
Translates to: LQLILGRKVSCCARDDHPPFVWG*IDGHLD
Trigger: GTCAAGGTGTCCATCTATGCATCCCCAGACAAACGG...AGGATGATCATCTCTGGCACAACAGCTCACTTTTCTTCCAAGGATAAGTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR GCA 90 bp GTATTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCACCATTCATTTGGAATaGTCTCAAAAATCTACCCTT +
Preference number: 4 (lower is better)
Translates to: VFLAETGSHRVSQDGLHLTIHLE*SQKSTL
Trigger: AAGGGTAGATTTTTGAGAGCATTCCAAATGAATGGT...GAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CCA 90 bp GTATTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCATCCAGTTTGGAGAGTaGATAGTAGATATCAAAGTA +
Preference number: 4 (lower is better)
Translates to: VFLAETGSHRVSQDGLHLIQFGE*IVDIKV
Trigger: TACTTTGATATCTACTATCCACTCTCCAAACTGGAT...GAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CCA 90 bp TTTCCCCTCTTGACCCAACATCCCAAGTCTTCCTTAATAATGCAAACATCAGTCAATAGGATACTGAACTaGCCTTCCCCCACCACTCCA +
Preference number: 4 (lower is better)
Translates to: FPLLTQHPKSSLIMQTSVNRILN*PSPTTP
Trigger: TGGAGTGGTGGGGGAAGGCCAGTTCAGTATCCTATT...GACTGATGTTTGCATTATTAAGGAAGACTTGGGATGTTGGGTCAAGAGGGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR TCA 90 bp AGTAACTCAGACCTTCGAGAAGTGCGGGGCTGCTTGTTTCATGTTGGAGGTAGTCATTGGTTTTCTGTGTaGATTAACCATTGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: SNSDLREVRGCLFHVGGSHWFSV*INHCRR
Trigger: TCTTCTGCAATGGTTAATTCACACAGAAAACCAATG...ACTACCTCCAACATGAAACAAGCAGCCCCGCACTTCTCGAAGGTCTGAGTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR TCA 90 bp CACTTTCCCCTCTTGACCCAACATCCCAAGTCTTCCTTAATAATGCAAACATCAAACATTTCCTGTATTTaGGTCGGGGTTTCCGCTGGT +
Preference number: 4 (lower is better)
Translates to: HFPLLTQHPKSSLIMQTSNISCI*VGVSAG
Trigger: ACCAGCGGAAACCCCGACTCAAATACAGGAAATGTT...TGATGTTTGCATTATTAAGGAAGACTTGGGATGTTGGGTCAAGAGGGGAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR TCA 90 bp CACTTTCCCCTCTTGACCCAACATCCCAAGTCTTCCTTAATAATGCAAACATCATCCTTGGAAGAAAAGTaGGCTGTTGTGCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: HFPLLTQHPKSSLIMQTSSLEEK*AVVPEM
Trigger: CATCTCTGGCACAACAGCTCACTTTTCTTCCAAGGA...TGATGTTTGCATTATTAAGGAAGACTTGGGATGTTGGGTCAAGAGGGGAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR TCA 90 bp AGTAAGTCATGTCAAGAGCTTTGTCTAGGGTCAGTCTCCCTGCACCAACTAGCTACAGTAGTTTCAAAGTaGTCTTCCAAAAGACCTCCT +
Preference number: 4 (lower is better)
Translates to: SKSCQELCLGSVSLHQLATVVSK*SSKRPP
Trigger: AGGAGGTCTTTTGGAAGATCACTTTGAAACTACTGT...AGCTAGTTGGTGCAGGGAGACTGACCCTAGACAAAGCTCTTGACATGACTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR GCA 90 bp TGGAGAGTCCATGTAGTCATCATCTCTTTGACCTCTGCATTTTCCCCCAGAAAGTTGGATAGTGCAATATaGCTGCTCTCTCTTCGTATC +
Preference number: 4 (lower is better)
Translates to: WRVHVVIISLTSAFSPRKLDSAI*LLSLRI
Trigger: GATACGAAGAGAGAGCAGGCATATTGCACTATCCAA...CTTTCTGGGGGAAAATGCAGAGGTCAAAGAGATGATGACTACATGGACTCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR CCA 90 bp GATCTCAAAAATCTACCCTTGAGGTACTTCATGAATGTAAGGCTTAAACCAAATAGTCGGGGTTTCCGCTaGTTTGGAGATAGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: DLKNLPLRYFMNVRLKPNSRGFR*FGDRAG
Trigger: TCCCGCCCTATCTCCAAACCAGCGGAAACCCCGACT...ATTTGGTTTAAGCCTTACATTCATGAAGTACCTCAAGGGTAGATTTTTGAGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CCA 90 bp TTTCCCCTCTTGACCCAACATCCCAAGTCTTCCTTAATAATGCAAACATCAGTCAAATGTGTACTGTATTaGGGCACATCCATGGCCACC +
Preference number: 4 (lower is better)
Translates to: FPLLTQHPKSSLIMQTSVKCVLY*GTSMAT
Trigger: GGTGGCCATGGATGTGCCCCAATACAGTACACATTT...GACTGATGTTTGCATTATTAAGGAAGACTTGGGATGTTGGGTCAAGAGGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR TCA 90 bp TTTCCCCTCTTGACCCAACATCCCAAGTCTTCCTTAATAATGCAAACATCAGTCATCTTGGGATCCGAATaGCAAACTCCACCAGATGTA +
Preference number: 4 (lower is better)
Translates to: FPLLTQHPKSSLIMQTSVILGSE*QTPPDV
Trigger: TACATCTGGTGGAGTTTGTCATTCGGATCCCAAGAT...GACTGATGTTTGCATTATTAAGGAAGACTTGGGATGTTGGGTCAAGAGGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR TCA 90 bp TTTCCCCTCTTGACCCAACATCCCAAGTCTTCCTTAATAATGCAAACATCAGTCAATATCCACAGCTCTTaGCTTGAGCTTCACTGGTGT +
Preference number: 4 (lower is better)
Translates to: FPLLTQHPKSSLIMQTSVNIHSS*LELHWC
Trigger: ACACCAGTGAAGCTCAAGTCAAGAGCTGTGGATATT...GACTGATGTTTGCATTATTAAGGAAGACTTGGGATGTTGGGTCAAGAGGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR GCA 90 bp GTTCAATTAACTTCAGTAACTTTTCCTGATGCTTGCTCGTTGACAAAGCATACACAGACCTTCGAGAAGTaGGGGGCTGCTTGTTTCATG +
Preference number: 4 (lower is better)
Translates to: VQLTSVTFPDACSLTKHTQTFEK*GAACFM
Trigger: CATGAAACAAGCAGCCCCGCACTTCTCGAAGGTCTG...TGTATGCTTTGTCAACGAGCAAGCATCAGGAAAAGTTACTGAAGTTAATTGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR GCA 90 bp GATCTCAAAAATCTACCCTTGAGGTACTTCATGAATGTAAGGCTTAAACCAAATTCCCATGCTAGTTGCTaGCCCTTTGGACGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: DLKNLPLRYFMNVRLKPNSHASC*PFGRLA
Trigger: TGCCAGACGTCCAAAGGGGCAGCAACTAGCATGGGA...ATTTGGTTTAAGCCTTACATTCATGAAGTACCTCAAGGGTAGATTTTTGAGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CCA 90 bp ACCCTGTTTGACTTCATGCAGGCAGTCATGTCTGATGTACCTTTTCTTTTCTTTTTCATGGCACTGCACTaGCTCCAGTTATGTCACATG +
Preference number: 4 (lower is better)
Translates to: TLFDFMQAVMSDVPFLFFFMALH*LQLCHM
Trigger: CATGTGACATAACTGGAGCCAGTGCAGTGCCATGAA...AAAGAAAAGAAAAGGTACATCAGACATGACTGCCTGCATGAAGTCAAACAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CCA 90 bp ACCCTGTTTGACTTCATGCAGGCAGTCATGTCTGATGTACCTTTTCTTTTCTTTAAGCAGAAGAGGTCTTaGGGTCAAAAAGCAGTGACG +
Preference number: 4 (lower is better)
Translates to: TLFDFMQAVMSDVPFLFFKQKRS*GQKAVT
Trigger: CGTCACTGCTTTTTGACCCCAAGACCTCTTCTGCTT...AAAGAAAAGAAAAGGTACATCAGACATGACTGCCTGCATGAAGTCAAACAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CCA 90 bp GATCTCAAAAATCTACCCTTGAGGTACTTCATGAATGTAAGGCTTAAACCAAATTGGTGCGCCAGTTCATaGGCTATGACTCTGGTGACC +
Preference number: 4 (lower is better)
Translates to: DLKNLPLRYFMNVRLKPNWCASS*AMTLVT
Trigger: GGTCACCAGAGTCATAGCCCATGAACTGGCGCACCA...ATTTGGTTTAAGCCTTACATTCATGAAGTACCTCAAGGGTAGATTTTTGAGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR TCA 90 bp ACCCTGTTTGACTTCATGCAGGCAGTCATGTCTGATGTACCTTTTCTTTTCTTTTGCTCCAAAGTGGATTaGCTAACACTTTCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: TLFDFMQAVMSDVPFLFFCSKVD*LTLSPL
Trigger: AAGAGGGGAAAGTGTTAGTCAATCCACTTTGGAGCA...AAAGAAAAGAAAAGGTACATCAGACATGACTGCCTGCATGAAGTCAAACAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR TCA 90 bp TTTCCCCTCTTGACCCAACATCCCAAGTCTTCCTTAATAATGCAAACATCAGTCTTGAAAAGTTGGCTTTaGACAACGGTTCATCAAAGC +
Preference number: 4 (lower is better)
Translates to: FPLLTQHPKSSLIMQTSVLKSWL*TTVHQS
Trigger: GCTTTGATGAACCGTTGTTCAAAGCCAACTTTTCAA...GACTGATGTTTGCATTATTAAGGAAGACTTGGGATGTTGGGTCAAGAGGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR GCA 90 bp GTTCAATTAACTTCAGTAACTTTTCCTGATGCTTGCTCGTTGACAAAGCATACAAGTTCTTCATGGCACTaGACTGGCTCCAGTTATGTC +
Preference number: 4 (lower is better)
Translates to: VQLTSVTFPDACSLTKHTSSSWH*TGSSYV
Trigger: GACATAACTGGAGCCAGTGCAGTGCCATGAAGAACT...TGTATGCTTTGTCAACGAGCAAGCATCAGGAAAAGTTACTGAAGTTAATTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR GCA 90 bp GATCTCAAAAATCTACCCTTGAGGTACTTCATGAATGTAAGGCTTAAACCAAATCAGCAGCTTTCTGGATaGAAGGAGCATGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: DLKNLPLRYFMNVRLKPNQQLSG*KEHGSG
Trigger: ACCTGAACCATGCTCCTTGCATCCAGAAAGCTGCTG...ATTTGGTTTAAGCCTTACATTCATGAAGTACCTCAAGGGTAGATTTTTGAGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CCA 90 bp TTTCCCCTCTTGACCCAACATCCCAAGTCTTCCTTAATAATGCAAACATCAGTCGAACAAATGCATATTTaGGGCAAGATGGCTGTTAAG +
Preference number: 4 (lower is better)
Translates to: FPLLTQHPKSSLIMQTSVEQMHI*GKMAVK
Trigger: CTTAACAGCCATCTTGCCCCAAATATGCATTTGTTC...GACTGATGTTTGCATTATTAAGGAAGACTTGGGATGTTGGGTCAAGAGGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR TCA 90 bp GTTCAATTAACTTCAGTAACTTTTCCTGATGCTTGCTCGTTGACAAAGCATACAGAAGGGTGGCATTCGTaGTTTCAAGATCTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: VQLTSVTFPDACSLTKHTEGWHS*FQDLCC
Trigger: ACAGCAAAGATCTTGAAATCACGAATGCCACCCTTC...TGTATGCTTTGTCAACGAGCAAGCATCAGGAAAAGTTACTGAAGTTAATTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR TCA 90 bp ACAGAAGTCTACATCTACTTTAATTTTCCACTGGATTCCATCCACTGGGAGAAGATCTCTTCTACTCTGTaGCTCTCTTTATCCTTACCA +
Preference number: 4 (lower is better)
Translates to: TEVYIYFNFPLDSIHWEKISSTL*LSLSLP
Trigger: TGGTAAGGATAAAGAGAGTCACAGAGTAGAAGAGAT...CTTCTCCCAGTGGATGGAATCCAGTGGAAAATTAAAGTAGATGTAGACTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR GCA 90 bp GTTCAATTAACTTCAGTAACTTTTCCTGATGCTTGCTCGTTGACAAAGCATACATTGTCACTCCAGCTTTaGCTGTCAATCACTGGCTTA +
Preference number: 4 (lower is better)
Translates to: VQLTSVTFPDACSLTKHTLSLQL*LSITGL
Trigger: TAAGCCAGTGATTGACAGGCAAAGCTGGAGTGACAA...TGTATGCTTTGTCAACGAGCAAGCATCAGGAAAAGTTACTGAAGTTAATTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR GCA 90 bp GATCTCAAAAATCTACCCTTGAGGTACTTCATGAATGTAAGGCTTAAACCAAATAAGGTAATTCCATCCTaGTGTTGTCTGAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: DLKNLPLRYFMNVRLKPNKVIPS*CCLSTH
Trigger: GTGGGTGCTCAGACAACAGCAGGATGGAATTACCTT...ATTTGGTTTAAGCCTTACATTCATGAAGTACCTCAAGGGTAGATTTTTGAGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CCA 90 bp CACTTTCCCCTCTTGACCCAACATCCCAAGTCTTCCTTAATAATGCAAACATCAATATTTGGGGCAAGATaGCTGTTAAGCAGTAAAATC +
Preference number: 4 (lower is better)
Translates to: HFPLLTQHPKSSLIMQTSIFGAR*LLSSKI
Trigger: GATTTTACTGCTTAACAGCCATCTTGCCCCAAATAT...TGATGTTTGCATTATTAAGGAAGACTTGGGATGTTGGGTCAAGAGGGGAAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CCA 90 bp GATCTCAAAAATCTACCCTTGAGGTACTTCATGAATGTAAGGCTTAAACCAAATAAAGCCATGCGTGCCTaGGTTGGCTCAAAATCTGTT +
Preference number: 4 (lower is better)
Translates to: DLKNLPLRYFMNVRLKPNKAMRA*VGSKSV
Trigger: AACAGATTTTGAGCCAACCCAGGCACGCATGGCTTT...ATTTGGTTTAAGCCTTACATTCATGAAGTACCTCAAGGGTAGATTTTTGAGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CCA 90 bp CACTTTCCCCTCTTGACCCAACATCCCAAGTCTTCCTTAATAATGCAAACATCATTGCCTGTCAATCACTaGCTTAAAATACTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: HFPLLTQHPKSSLIMQTSLPVNH*LKILKK
Trigger: CTTCTTCAGTATTTTAAGCCAGTGATTGACAGGCAA...TGATGTTTGCATTATTAAGGAAGACTTGGGATGTTGGGTCAAGAGGGGAAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CCA 90 bp TTGCAACTTATCCTTGGAAGAAAAGTGAGCTGTTGTGCCAGAGATGATCATCCTTTGCCTGTCAATCACTaGCTTAAAATACTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LQLILGRKVSCCARDDHPLPVNH*LKILKK
Trigger: CTTCTTCAGTATTTTAAGCCAGTGATTGACAGGCAA...AGGATGATCATCTCTGGCACAACAGCTCACTTTTCTTCCAAGGATAAGTTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR CCA 90 bp AGAGCTGCCAAGTTCTGTGTCTTGATAACCTTTCCTTCCATTCCTAGTTCAATTCTTGCAACTTATCCTTaGAAGAAAAGTGAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: RAAKFCVLITFPSIPSSILATYP*KKSELL
Trigger: CAACAGCTCACTTTTCTTCCAAGGATAAGTTGCAAG...AATTGAACTAGGAATGGAAGGAAAGGTTATCAAGACACAGAACTTGGCAGCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR TCA 90 bp GTTCAATTAACTTCAGTAACTTTTCCTGATGCTTGCTCGTTGACAAAGCATACAGAAGAAGGTAACGCTTaGGGTTTTCAGAGATATCTG +
Preference number: 4 (lower is better)
Translates to: VQLTSVTFPDACSLTKHTEEGNA*GFQRYL
Trigger: CAGATATCTCTGAAAACCTCAAGCGTTACCTTCTTC...TGTATGCTTTGTCAACGAGCAAGCATCAGGAAAAGTTACTGAAGTTAATTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR GCA 90 bp ACCCTGTTTGACTTCATGCAGGCAGTCATGTCTGATGTACCTTTTCTTTTCTTTAACTATTTGACAGACTaGTCCACAAGTCATCATTCT +
Preference number: 4 (lower is better)
Translates to: TLFDFMQAVMSDVPFLFFNYLTD*STSHHS
Trigger: AGAATGATGACTTGTGGAGCAGTCTGTCAAATAGTT...AAAGAAAAGAAAAGGTACATCAGACATGACTGCCTGCATGAAGTCAAACAGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR GCA 90 bp AGAGCTGCCAAGTTCTGTGTCTTGATAACCTTTCCTTCCATTCCTAGTTCAATTAACTATTTGACAGACTaGTCCACAAGTCATCATTCT +
Preference number: 4 (lower is better)
Translates to: RAAKFCVLITFPSIPSSINYLTD*STSHHS
Trigger: AGAATGATGACTTGTGGAGCAGTCTGTCAAATAGTT...AATTGAACTAGGAATGGAAGGAAAGGTTATCAAGACACAGAACTTGGCAGCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR TCA 90 bp GATCTCAAAAATCTACCCTTGAGGTACTTCATGAATGTAAGGCTTAAACCAAATTCCAGATGTGATCCTTaGGCCTCAAGAGATTCAAAA +
Preference number: 4 (lower is better)
Translates to: DLKNLPLRYFMNVRLKPNSRCDP*ASRDSK
Trigger: TTTTGAATCTCTTGAGGCTCAAGGATCACATCTGGA...ATTTGGTTTAAGCCTTACATTCATGAAGTACCTCAAGGGTAGATTTTTGAGATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR GCA 90 bp GTTCAATTAACTTCAGTAACTTTTCCTGATGCTTGCTCGTTGACAAAGCATACAACTTTTCCTGATGCTTaGTCGTTGACAAAGCATACA +
Preference number: 4 (lower is better)
Translates to: VQLTSVTFPDACSLTKHTTFPDA*SLTKHT
Trigger: TGTATGCTTTGTCAACGAGCAAGCATCAGGAAAAGT...TGTATGCTTTGTCAACGAGCAAGCATCAGGAAAAGTTACTGAAGTTAATTGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513084.5
3UTR CAA 72 bp AGACCATTCATTTGGAATGCTCTCAAAAATCTACCCTaGAGGTTCTTCATGAATGTAAGGCTTAACCCAAAA +
Preference number: 4 (lower is better)
Translates to: RPFIWNALKNLP*RFFMNVRLNPK
Trigger: TTTTGGGTTAAGCCTTACATTCATGAAGAACCTCAAGGGTAGATTTTTGAGAGCATTCCAAATGAATGGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR GCA 90 bp GATCTCAAAAATCTACCCTTGAGGTACTTCATGAATGTAAGGCTTAAACCAAATTCAAGATCTTTGCTGTaGAAGATGATAAACTGGGTA +
Preference number: 4 (lower is better)
Translates to: DLKNLPLRYFMNVRLKPNSRSLL*KMINWV
Trigger: TACCCAGTTTATCATCTTGCACAGCAAAGATCTTGA...ATTTGGTTTAAGCCTTACATTCATGAAGTACCTCAAGGGTAGATTTTTGAGATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CAA 90 bp ACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGGGGGTTTCCGCTGGTTaGGAGATAGGGCGGGATGAA +
Preference number: 5 (lower is better)
Translates to: TASSTSRVYAIFLLQPAEGVSAG*EIGRDE
Trigger: TTCATCCCGCCCTATCTCCAAACCAGCGGAAACCCC...CTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp CCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAGCTGGGACTACAGGGGGGTTTCCGCTGGTTaGGAGATAGGGCGGGATGAA +
Preference number: 5 (lower is better)
Translates to: PGFMPFSCCSLPSSWDYRGVSAG*EIGRDE
Trigger: TTCATCCCGCCCTATCTCCAAACCAGCGGAAACCCC...CCTGTAGTCCCAGCTACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp ACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTCCCAGACTGAGCCCTaGTCACTCCAGCTTTGCCTG +
Preference number: 5 (lower is better)
Translates to: TASSTSRVYAIFLLQPAESQTEP*SLQLCL
Trigger: CAGGCAAAGCTGGAGTGACAAGGGCTCAGTCTGGGA...CTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp CTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTTCCCAGACTGAGCCCTaGTCACTCCAGCTTTGCCTG +
Preference number: 5 (lower is better)
Translates to: LQAPPPGFMPFSCCSLPSSQTEP*SLQLCL
Trigger: CAGGCAAAGCTGGAGTGACAAGGGCTCAGTCTGGGA...ACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp CACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGACTAGTTGCTGCCCCTTaGGACGTCTGGCAATCGCAT +
Preference number: 5 (lower is better)
Translates to: HCKLHLPGLCHFPAAACRLVAAP*DVWQSH
Trigger: ATGCGATTGCCAGACGTCCAAAGGGGCAGCAACTAG...TCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp ACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGCCATGCGTGCCTGGGTaGGCTCAAAATCTGTTACTG +
Preference number: 5 (lower is better)
Translates to: TASSTSRVYAIFLLQPAEPCVPG*AQNLLL
Trigger: CAGTAACAGATTTTGAGCCAACCCAGGCACGCATGG...CTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp CTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTCAGCTGTGTAATGAGTaGGTCCCATCCATGACCCTC +
Preference number: 5 (lower is better)
Translates to: LQAPPPGFMPFSCCSLPSQLCNE*VPSMTL
Trigger: GAGGGTCATGGATGGGACCAACTCATTACACAGCTG...ACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp CACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGACAGCTGTGTAATGAGTaGGTCCCATCCATGACCCTC +
Preference number: 5 (lower is better)
Translates to: HCKLHLPGLCHFPAAACRQLCNE*VPSMTL
Trigger: GAGGGTCATGGATGGGACCAACTCATTACACAGCTG...TCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp CCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAGCTGGGACTACAGGGAAGTGCGGGGCTGCTaGTTTCATGTTGGAGGTAGT +
Preference number: 5 (lower is better)
Translates to: PGFMPFSCCSLPSSWDYREVRGC*FHVGGS
Trigger: ACTACCTCCAACATGAAACAAGCAGCCCCGCACTTC...CCTGTAGTCCCAGCTACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp ACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGGAAGTGCGGGGCTGCTaGTTTCATGTTGGAGGTAGT +
Preference number: 5 (lower is better)
Translates to: TASSTSRVYAIFLLQPAEEVRGC*FHVGGS
Trigger: ACTACCTCCAACATGAAACAAGCAGCCCCGCACTTC...CTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp TGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTATCCAGAGAGGTGAGATaGGGGTGGACAAAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: CKLHLPGLCHFPAAACRVSREVR*GWTKRS
Trigger: TGACCTCTTTGTCCACCCCAATCTCACCTCTCTGGA...TACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp AACTCGTGGAGTAGGTCAATGGGATATGCCACAGGTACCTCTCCTGCAGGGCCCTCCAGAGAGGTGAGATaGGGGTGGACAAAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: NSWSRSMGYATGTSPAGPSREVR*GWTKRS
Trigger: TGACCTCTTTGTCCACCCCAATCTCACCTCTCTGGA...GGGCCCTGCAGGAGAGGTACCTGTGGCATATCCCATTGACCTACTCCACGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR CAA 90 bp ACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGAAGCCATCACCTAACTaGGCTTGGAAGTCCATAGCC +
Preference number: 5 (lower is better)
Translates to: TASSTSRVYAIFLLQPAEKPSPN*AWKSIA
Trigger: GGCTATGGACTTCCAAGCCAAGTTAGGTGATGGCTT...CTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp TGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTACCATGCGTGCCTGGGTaGGCTCAAAATCTGTTACTG +
Preference number: 5 (lower is better)
Translates to: CKLHLPGLCHFPAAACRVPCVPG*AQNLLL
Trigger: CAGTAACAGATTTTGAGCCAACCCAGGCACGCATGG...TACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp GTATTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCGGGGTTTCCGCTGGTTaGGAGATAGGGCGGGATGAA +
Preference number: 5 (lower is better)
Translates to: VFLAETGSHRVSQDGLHLGVSAG*EIGRDE
Trigger: TTCATCCCGCCCTATCTCCAAACCAGCGGAAACCCC...GAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp CCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAGCTGGGACTACAGGCTTGTCACTCCAGCTTaGCCTGTCAATCACTGGCTT +
Preference number: 5 (lower is better)
Translates to: PGFMPFSCCSLPSSWDYRLVTPA*PVNHWL
Trigger: AAGCCAGTGATTGACAGGCAAAGCTGGAGTGACAAG...CCTGTAGTCCCAGCTACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp TTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGCTAGTTGCTGCCCCTTaGGACGTCTGGCAATCGCAT +
Preference number: 5 (lower is better)
Translates to: FLAETGSHRVSQDGLHLLLVAAP*DVWQSH
Trigger: ATGCGATTGCCAGACGTCCAAAGGGGCAGCAACTAG...CAGGAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp CTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTCTGGTGTTACCCTGTTaGACTTCATGCAGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: LQAPPPGFMPFSCCSLPSLVLPC*TSCRQS
Trigger: TGACTGCCTGCATGAAGTCAAACAGGGTAACACCAG...ACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CAA 90 bp CACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAAAACATTTCCTGTATTaGAGTCGGGGTTTCCGCTGG +
Preference number: 5 (lower is better)
Translates to: HCKLHLPGLCHFPAAACRKHFLY*SRGFRW
Trigger: CCAGCGGAAACCCCGACTCAAATACAGGAAATGTTT...TCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp CCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAGCTGGGACTACAGGAAACATTTCCTGTATTaGAGTCGGGGTTTCCGCTGG +
Preference number: 5 (lower is better)
Translates to: PGFMPFSCCSLPSSWDYRKHFLY*SRGFRW
Trigger: CCAGCGGAAACCCCGACTCAAATACAGGAAATGTTT...CCTGTAGTCCCAGCTACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp ACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGAGGCGAGCATGTTACTaGTCATCTTGGGATCCGAAT +
Preference number: 5 (lower is better)
Translates to: TASSTSRVYAIFLLQPAERRACY*SSWDPN
Trigger: ATTCGGATCCCAAGATGACAAGTAACATGCTCGCCT...CTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379904.8
ENST00000437043.8
CDS-3UTR CAA 90 bp ACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGAAAATGTGTACTGTATaGGGGCACATCCATGGCCAC +
Preference number: 5 (lower is better)
Translates to: TASSTSRVYAIFLLQPAEKMCTV*GHIHGH
Trigger: GTGGCCATGGATGTGCCCCAATACAGTACACATTTT...CTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CAA 90 bp GTATTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCTCCAGAGAGGTGAGATaGGGGTGGACAAAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: VFLAETGSHRVSQDGLHLSREVR*GWTKRS
Trigger: TGACCTCTTTGTCCACCCCAATCTCACCTCTCTGGA...GAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp CACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAATAAACTGGGTAGCATaGCTGACCAAGACTTCGATC +
Preference number: 5 (lower is better)
Translates to: HCKLHLPGLCHFPAAACRINWVA*LTKTSI
Trigger: GATCGAAGTCTTGGTCAGCAATGCTACCCAGTTTAT...TCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCATAAACTGGGTAGCATaGCTGACCAAGACTTCGATC +
Preference number: 5 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACINWVA*LTKTSI
Trigger: GATCGAAGTCTTGGTCAGCAATGCTACCCAGTTTAT...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp TTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGAAGCCATCACCTAACTaGGCTTGGAAGTCCATAGCC +
Preference number: 5 (lower is better)
Translates to: FLAETGSHRVSQDGLHLLKPSPN*AWKSIA
Trigger: GGCTATGGACTTCCAAGCCAAGTTAGGTGATGGCTT...CAGGAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp GTATTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCCATGCGTGCCTGGGTaGGCTCAAAATCTGTTACTG +
Preference number: 5 (lower is better)
Translates to: VFLAETGSHRVSQDGLHLPCVPG*AQNLLL
Trigger: CAGTAACAGATTTTGAGCCAACCCAGGCACGCATGG...GAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp CACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGACATAGATGGACACCTTaGGCATGTTGGATAGTGCAA +
Preference number: 5 (lower is better)
Translates to: HCKLHLPGLCHFPAAACRHRWTP*ACWIVQ
Trigger: TTGCACTATCCAACATGCCAAAGGTGTCCATCTATG...TCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379904.8
CDS-3UTR CAA 90 bp TGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAAAACATTTCCTGTATTaGAGTCGGGGTTTCCGCTGG +
Preference number: 5 (lower is better)
Translates to: CKLHLPGLCHFPAAACRVKHFLY*SRGFRW
Trigger: CCAGCGGAAACCCCGACTCAAATACAGGAAATGTTT...TACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp TTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGCTTGTCACTCCAGCTTaGCCTGTCAATCACTGGCTT +
Preference number: 5 (lower is better)
Translates to: FLAETGSHRVSQDGLHLLLVTPA*PVNHWL
Trigger: AAGCCAGTGATTGACAGGCAAAGCTGGAGTGACAAG...CAGGAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp CTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTTTGCTCCAAAGTGGATaGACTAACACTTTCCCCTCT +
Preference number: 5 (lower is better)
Translates to: LQAPPPGFMPFSCCSLPSLLQSG*TNTFPS
Trigger: AGAGGGGAAAGTGTTAGTCAATCCACTTTGGAGCAA...ACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CAA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCAAAGCATAATGTGTTaGATTCCGTTTGTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACQSIMC*IPFVWG
Trigger: TCCCCAGACAAACGGAATCAAACACATTATGCTTTG...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp ACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGCCTGATGCTTGCTCGTaGACAAAGCATACAGAATTT +
Preference number: 5 (lower is better)
Translates to: TASSTSRVYAIFLLQPAEPDACS*TKHTEF
Trigger: AAATTCTGTATGCTTTGTCAACGAGCAAGCATCAGG...CTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp CCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAGCTGGGACTACAGGCCTGATGCTTGCTCGTaGACAAAGCATACAGAATTT +
Preference number: 5 (lower is better)
Translates to: PGFMPFSCCSLPSSWDYRPDACS*TKHTEF
Trigger: AAATTCTGTATGCTTTGTCAACGAGCAAGCATCAGG...CCTGTAGTCCCAGCTACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS TCA 90 bp CTCCCAGATGGATCCTGGCCCTGGGAAACCAAGCCGTCCACTCTATaGAGCATCCTTGATTCTTCTATTTCCCTCACCTCACATGACCAA +
Preference number: 5 (lower is better)
Translates to: LPDGSWPWETKPSTL*SILDSSISLTSHDQ
Trigger: TTGGTCATGTGAGGTGAGGGAAATAGAAGAATCAAGGATGCTTCATAGAGTGGACGGCTTGGTTTCCCAGGGCCAGGATCCATCTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507346.1
CDS-3UTR CAA 90 bp CACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGACTCTCTCTTCGTATCTaGATTGAAAAGTTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: HCKLHLPGLCHFPAAACRLSLRI*IEKLAL
Trigger: CAAAGCCAACTTTTCAATCAAGATACGAAGAGAGAG...TCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp AACTCGTGGAGTAGGTCAATGGGATATGCCACAGGTACCTCTCCTGCAGGGCCCCAAAGCATAATGTGTTaGATTCCGTTTGTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: NSWSRSMGYATGTSPAGPQSIMC*IPFVWG
Trigger: TCCCCAGACAAACGGAATCAAACACATTATGCTTTG...GGGCCCTGCAGGAGAGGTACCTGTGGCATATCCCATTGACCTACTCCACGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR CAA 90 bp CACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTTCAGCACTTGACATaGACAGTTCATATTGCTCTA +
Preference number: 5 (lower is better)
Translates to: HCKLHLPGLCHFPAAACRVQHLT*TVHIAL
Trigger: TAGAGCAATATGAACTGTCAATGTCAAGTGCTGAAC...TCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp TGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTACCTGATGCTTGCTCGTaGACAAAGCATACAGAATTT +
Preference number: 5 (lower is better)
Translates to: CKLHLPGLCHFPAAACRVPDACS*TKHTEF
Trigger: AAATTCTGTATGCTTTGTCAACGAGCAAGCATCAGG...TACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCATATTCCTTTTCCTTTaGTATCTCTGTGAGGGCAGA +
Preference number: 5 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACIFLFL*YLCEGR
Trigger: TCTGCCCTCACAGAGATACAAAAGGAAAAGGAATAT...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CAA 90 bp GCTCACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCAAAATAGTCATCAAATaGCAGCTCTGGATATGTAGC +
Preference number: 5 (lower is better)
Translates to: AHCKLHLPGLCHFPAAACKIVIK*QLWICS
Trigger: GCTACATATCCAGAGCTGCAATTTGATGACTATTTT...GCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp CTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTTTTCTAAACAACTATTaGACAGACTGCTCCACAAGT +
Preference number: 5 (lower is better)
Translates to: LQAPPPGFMPFSCCSLPSFLNNY*TDCSTS
Trigger: ACTTGTGGAGCAGTCTGTCAAATAGTTGTTTAGAAA...ACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp TGCATCTTTTGGCTGGATACGATAGCTGAGAGCAGGCAGCTGCACTGCCTGATTAGGCGAGCATGTTACTaGTCATCTTGGGATCCGAAT +
Preference number: 5 (lower is better)
Translates to: CIFWLDTIAESRQLHCLIRRACY*SSWDPN
Trigger: ATTCGGATCCCAAGATGACAAGTAACATGCTCGCCT...AATCAGGCAGTGCAGCTGCCTGCTCTCAGCTATCGTATCCAGCCAAAAGATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CAA 90 bp TGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTACCAGAGACCATTCATTaGGAATGCTCTCAAAAATCT +
Preference number: 5 (lower is better)
Translates to: CKLHLPGLCHFPAAACRVPETIH*ECSQKS
Trigger: AGATTTTTGAGAGCATTCCAAATGAATGGTCTCTGG...TACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CAA 90 bp ACTGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGCTCAAAAATCTACCCTaGAGGTACTTCATGAATGTA +
Preference number: 5 (lower is better)
Translates to: TASSTSRVYAIFLLQPAELKNLP*RYFMNV
Trigger: TACATTCATGAAGTACCTCAAGGGTAGATTTTTGAG...CTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CAA 90 bp TGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTATTGACCTTCATGATATaGCTCCAAAGTGGATTGACT +
Preference number: 5 (lower is better)
Translates to: CKLHLPGLCHFPAAACRVLTFMI*LQSGLT
Trigger: AGTCAATCCACTTTGGAGCAATATCATGAAGGTCAA...TACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CAA 90 bp TTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGTTACTGCAAGAATTCTaGTTTCACCACCAAGAGTTC +
Preference number: 5 (lower is better)
Translates to: FLAETGSHRVSQDGLHLLLLQEF*FHHQEF
Trigger: GAACTCTTGGTGGTGAAACAAGAATTCTTGCAGTAA...CAGGAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp TGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTAATCTTGATTGAAAAGTaGGCTTTGAACAACGGTTCA +
Preference number: 5 (lower is better)
Translates to: CKLHLPGLCHFPAAACRVILIEK*ALNNGS
Trigger: TGAACCGTTGTTCAAAGCCAACTTTTCAATCAAGAT...TACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp TTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGGTTCAGCACTTGACATaGACAGTTCATATTGCTCTA +
Preference number: 5 (lower is better)
Translates to: FLAETGSHRVSQDGLHLLVQHLT*TVHIAL
Trigger: TAGAGCAATATGAACTGTCAATGTCAAGTGCTGAAC...CAGGAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp TGCAAGCTCCACCTCCCGGGTTTATGCCATTTTCCTGCTGCAGCCTGCCGAGTACTCAAAAATCTACCCTaGAGGTTCTTCATGAATGTA +
Preference number: 5 (lower is better)
Translates to: CKLHLPGLCHFPAAACRVLKNLP*RFFMNV
Trigger: TACATTCATGAAGAACCTCAAGGGTAGATTTTTGAG...TACTCGGCAGGCTGCAGCAGGAAAATGGCATAAACCCGGGAGGTGGAGCTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS GCA 90 bp GATAAACTGGGTAGCATTGCTGACCAAGACTTCGATCTTCTCAGATaGAACAAAGTCCAGAGAGGTGAGATTGGGGTGGACAAAGAGGTC +
Preference number: 5 (lower is better)
Translates to: DKLGSIADQDFDLLR*NKVQRGEIGVDKEV
Trigger: GACCTCTTTGTCCACCCCAATCTCACCTCTCTGGACTTTGTTGCATCTGAGAAGATCGAAGTCTTGGTCAGCAATGCTACCCAGTTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000510309.1
ENST00000510373.5
ENST00000513084.5
CDS-3UTR CAA 90 bp GTATTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCTTACTGCAAGAATTCTaGTTTCACCACCAAGAGTTC +
Preference number: 5 (lower is better)
Translates to: VFLAETGSHRVSQDGLHLLLQEF*FHHQEF
Trigger: GAACTCTTGGTGGTGAAACAAGAATTCTTGCAGTAA...GAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp GATACTGAACTGGCCTTCCCCCACCACTCCATCATCATGCATCTTTTGGCTGGACAAAGCATAATGTGTTaGATTCCGTTTGTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: DTELAFPHHSIIMHLLAGQSIMC*IPFVWG
Trigger: TCCCCAGACAAACGGAATCAAACACATTATGCTTTG...TCCAGCCAAAAGATGCATGATGATGGAGTGGTGGGGGAAGGCCAGTTCAGTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CAA 90 bp TTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCCTGAAAATAGTCATCAAATaGCAGCTCTGGATATGTAGC +
Preference number: 5 (lower is better)
Translates to: FLAETGSHRVSQDGLHLLKIVIK*QLWICS
Trigger: GCTACATATCCAGAGCTGCAATTTGATGACTATTTT...CAGGAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp TTTCATGTTGGAGGTAGTAAGTCATGTCAAGAGCTTTGTCTAGGGTCAGTCTCCGAAGTGCGGGGCTGCTaGTTTCATGTTGGAGGTAGT +
Preference number: 5 (lower is better)
Translates to: FHVGGSKSCQELCLGSVSEVRGC*FHVGGS
Trigger: ACTACCTCCAACATGAAACAAGCAGCCCCGCACTTC...GGAGACTGACCCTAGACAAAGCTCTTGACATGACTTACTACCTCCAACATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR CAA 90 bp CACATCATGAATCAGACCTACTCTGTCCTTAGGTCTGAGAAGTGTGTGGTTCTGCTTGTCACTCCAGCTTaGCCTGTCAATCACTGGCTT +
Preference number: 5 (lower is better)
Translates to: HIMNQTYSVLRSEKCVVLLVTPA*PVNHWL
Trigger: AAGCCAGTGATTGACAGGCAAAGCTGGAGTGACAAG...CAGAACCACACACTTCTCAGACCTAAGGACAGAGTAGGTCTGATTCATGATGTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR CAA 90 bp ACAGAAGTCTACATCTACTTTAATTTTCCACTGGATTCCATCCACTGGGAGAAGTCCCAGACTGAGCCCTaGTCACTCCAGCTTTGCCTG +
Preference number: 5 (lower is better)
Translates to: TEVYIYFNFPLDSIHWEKSQTEP*SLQLCL
Trigger: CAGGCAAAGCTGGAGTGACAAGGGCTCAGTCTGGGA...CTTCTCCCAGTGGATGGAATCCAGTGGAAAATTAAAGTAGATGTAGACTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS CCA 90 bp GAACAACGGTTCATCAAAGCAAGGGAAAGCCATGCGTGCCTGGGTTaGCTCAAAATCTGTTACTGCAAGAATTCTTGTTTCACCACCAAG +
Preference number: 5 (lower is better)
Translates to: EQRFIKARESHACLG*LKICYCKNSCFTTK
Trigger: CTTGGTGGTGAAACAAGAATTCTTGCAGTAACAGATTTTGAGCCAACCCAGGCACGCATGGCTTTCCCTTGCTTTGATGAACCGTTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000510309.1
ENST00000510373.5
ENST00000513084.5
CDS-3UTR CAA 90 bp GTATTTTTAGCGGAGACGGGGTCTCACCGTGTTAGCCAGGATGGTCTCCATCTCATCTTGATTGAAAAGTaGGCTTTGAACAACGGTTCA +
Preference number: 5 (lower is better)
Translates to: VFLAETGSHRVSQDGLHLILIEK*ALNNGS
Trigger: TGAACCGTTGTTCAAAGCCAACTTTTCAATCAAGAT...GAGATGGAGACCATCCTGGCTAACACGGTGAGACCCCGTCTCCGCTAAAAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000513084.5
CDS-3UTR CAA 90 bp TGTTGCAGTCGGAGTGAACACCCGTCTTGTTTAACCACCAGCAGGGGGATTCCTTTTCTAAACAACTATTaGACAGACTGCTCCACAAGT +
Preference number: 5 (lower is better)
Translates to: CCSRSEHPSCLTTSRGIPFLNNY*TDCSTS
Trigger: ACTTGTGGAGCAGTCTGTCAAATAGTTGTTTAGAAA...AGGAATCCCCCTGCTGGTGGTTAAACAAGACGGGTGTTCACTCCGACTGCAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR CAA 90 bp ACCCTGTTTGACTTCATGCAGGCAGTCATGTCTGATGTACCTTTTCTTTTCTTTCTAGTTGCTGCCCCTTaGGACGTCTGGCAATCGCAT +
Preference number: 5 (lower is better)
Translates to: TLFDFMQAVMSDVPFLFFLVAAP*DVWQSH
Trigger: ATGCGATTGCCAGACGTCCAAAGGGGCAGCAACTAG...AAAGAAAAGAAAAGGTACATCAGACATGACTGCCTGCATGAAGTCAAACAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS TCA 90 bp AAGGCGAGTCTAGGTCAGGCTATTCCACAGATCTCTTCTACTCTGTaGCTCTCTTTATCCTTACCATGTTACTTGTCATCTTGGGATCCG +
Preference number: 5 (lower is better)
Translates to: KASLGQAIPQISSTL*LSLSLPCYLSSWDP
Trigger: CGGATCCCAAGATGACAAGTAACATGGTAAGGATAAAGAGAGTCACAGAGTAGAAGAGATCTGTGGAATAGCCTGACCTAGACTCGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR CAA 90 bp CACTTTCCCCTCTTGACCCAACATCCCAAGTCTTCCTTAATAATGCAAACATCAAAGCCATCACCTAACTaGGCTTGGAAGTCCATAGCC +
Preference number: 5 (lower is better)
Translates to: HFPLLTQHPKSSLIMQTSKPSPN*AWKSIA
Trigger: GGCTATGGACTTCCAAGCCAAGTTAGGTGATGGCTT...TGATGTTTGCATTATTAAGGAAGACTTGGGATGTTGGGTCAAGAGGGGAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CAA 90 bp AGTAACTCAGACCTTCGAGAAGTGCGGGGCTGCTTGTTTCATGTTGGAGGTAGTCTCTCTCTTCGTATCTaGATTGAAAAGTTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: SNSDLREVRGCLFHVGGSLSLRI*IEKLAL
Trigger: CAAAGCCAACTTTTCAATCAAGATACGAAGAGAGAG...ACTACCTCCAACATGAAACAAGCAGCCCCGCACTTCTCGAAGGTCTGAGTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS-3UTR CAA 90 bp TGCATCTTTTGGCTGGATACGATAGCTGAGAGCAGGCAGCTGCACTGCCTGATTTTTCTAAACAACTATTaGACAGACTGCTCCACAAGT +
Preference number: 5 (lower is better)
Translates to: CIFWLDTIAESRQLHCLIFLNNY*TDCSTS
Trigger: ACTTGTGGAGCAGTCTGTCAAATAGTTGTTTAGAAA...AATCAGGCAGTGCAGCTGCCTGCTCTCAGCTATCGTATCCAGCCAAAAGATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CAA 90 bp AGTAAGTCATGTCAAGAGCTTTGTCTAGGGTCAGTCTCCCTGCACCAACTAGCTTCCTTACCATGTTACTaGTCATCTTGGGATCCGAAT +
Preference number: 5 (lower is better)
Translates to: SKSCQELCLGSVSLHQLASLPCY*SSWDPN
Trigger: ATTCGGATCCCAAGATGACAAGTAACATGGTAAGGA...AGCTAGTTGGTGCAGGGAGACTGACCCTAGACAAAGCTCTTGACATGACTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS CCA 90 bp GAAGTCCATAGCCACATAGTATTTCAGGTGAGGCGTAAGTTTCTCTaGAACCAGCAGTGCAATTTGTTCATGAGCAGGGTAACTCAAAAC +
Preference number: 5 (lower is better)
Translates to: EVHSHIVFQVRRKFL*NQQCNLFMSRVTQN
Trigger: GTTTTGAGTTACCCTGCTCATGAACAAATTGCACTGCTGGTTCCAGAGAAACTTACGCCTCACCTGAAATACTATGTGGCTATGGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000510309.1
ENST00000510373.5
ENST00000513084.5
CDS CCA 90 bp GTGGCATTCGTGATTTCAAGATCTTTGCTGTGCAAGATGATAAACTaGGTAGCATTGCTGACCAAGACTTCGATCTTCTCAGATGCAACA +
Preference number: 5 (lower is better)
Translates to: VAFVISRSLLCKMIN*VALLTKTSIFSDAT
Trigger: TGTTGCATCTGAGAAGATCGAAGTCTTGGTCAGCAATGCTACCCAGTTTATCATCTTGCACAGCAAAGATCTTGAAATCACGAATGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000510309.1
ENST00000510373.5
ENST00000513084.5
CDS-3UTR CAA 90 bp GTTCAATTAACTTCAGTAACTTTTCCTGATGCTTGCTCGTTGACAAAGCATACACAGCTGTGTAATGAGTaGGTCCCATCCATGACCCTC +
Preference number: 5 (lower is better)
Translates to: VQLTSVTFPDACSLTKHTQLCNE*VPSMTL
Trigger: GAGGGTCATGGATGGGACCAACTCATTACACAGCTG...TGTATGCTTTGTCAACGAGCAAGCATCAGGAAAAGTTACTGAAGTTAATTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS TCA 90 bp AACAGAAAGTCACAAACCTCTTGCAACTTATCCTTGGAAGAAAAGTaGGCTGTTGTGCCAGAGATGATCATCCTTATGTCATATGAGCCC +
Preference number: 5 (lower is better)
Translates to: NRKSQTSCNLSLEEK*AVVPEMIILMSYEP
Trigger: GGGCTCATATGACATAAGGATGATCATCTCTGGCACAACAGCTCACTTTTCTTCCAAGGATAAGTTGCAAGAGGTTTGTGACTTTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512869.1
CDS CCA 90 bp AAAACATCTGTTGGTATATTTAATTTTCCACTGGATTCCATCCACTaGGAGAAGAGTTCAGCAGCTTTCTGGATGCAAGGAGCATGGTTC +
Preference number: 5 (lower is better)
Translates to: KTSVGIFNFPLDSIH*EKSSAAFWMQGAWF
Trigger: GAACCATGCTCCTTGCATCCAGAAAGCTGCTGAACTCTTCTCCCAGTGGATGGAATCCAGTGGAAAATTAAATATACCAACAGATGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379904.8
ENST00000437043.8
CDS GCA 90 bp CACATAGTATTTCAGGTGAGGCGTAAGTTTCTCTGGAACCAGCAGTaGAATTTGTTCATGAGCAGGGTAACTCAAAACTTTCAGTTCTTT +
Preference number: 5 (lower is better)
Translates to: HIVFQVRRKFLWNQQ*NLFMSRVTQNFQFF
Trigger: AAAGAACTGAAAGTTTTGAGTTACCCTGCTCATGAACAAATTGCACTGCTGGTTCCAGAGAAACTTACGCCTCACCTGAAATACTATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000510309.1
ENST00000510373.5
ENST00000513084.5
CDS-3UTR CAA 90 bp TTTCCCCTCTTGACCCAACATCCCAAGTCTTCCTTAATAATGCAAACATCAGTCAATTATATTCCTTTCTaGTGTCTCTGTGAGGGCAGA +
Preference number: 5 (lower is better)
Translates to: FPLLTQHPKSSLIMQTSVNYIPF*CLCEGR
Trigger: TCTGCCCTCACAGAGACACAAGAAAGGAATATAATT...GACTGATGTTTGCATTATTAAGGAAGACTTGGGATGTTGGGTCAAGAGGGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS GCA 90 bp CTGTTACTGCAAGAATTCTTGTTTCACCACCAAGAGTTCTGTATGTaGTTTTATAAAACCCTTCAAAGCCATCACCTAACTTGGCTTGGA +
Preference number: 5 (lower is better)
Translates to: LLLQEFLFHHQEFCM*FYKTLQSHHLTWLG
Trigger: TCCAAGCCAAGTTAGGTGATGGCTTTGAAGGGTTTTATAAAAGCACATACAGAACTCTTGGTGGTGAAACAAGAATTCTTGCAGTAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000510309.1
ENST00000510373.5
ENST00000513084.5
CDS-3UTR CAA 90 bp CACTTTCCCCTCTTGACCCAACATCCCAAGTCTTCCTTAATAATGCAAACATCAATCTTGATTGAAAAGTaGGCTTTGAACAACGGTTCA +
Preference number: 5 (lower is better)
Translates to: HFPLLTQHPKSSLIMQTSILIEK*ALNNGS
Trigger: TGAACCGTTGTTCAAAGCCAACTTTTCAATCAAGAT...TGATGTTTGCATTATTAAGGAAGACTTGGGATGTTGGGTCAAGAGGGGAAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS-3UTR CAA 90 bp TTTCCCCTCTTGACCCAACATCCCAAGTCTTCCTTAATAATGCAAACATCAGTCAATGGAGAAAGTCACTaGAGGCTAAATAATTACAGC +
Preference number: 5 (lower is better)
Translates to: FPLLTQHPKSSLIMQTSVNGESH*RLNNYS
Trigger: GCTGTAATTATTTAGCCTCAAGTGACTTTCTCCATT...GACTGATGTTTGCATTATTAAGGAAGACTTGGGATGTTGGGTCAAGAGGGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS GCA 90 bp TCAAGTTCAATTGTCTTAACCTTTGGCATGTTGGATAGTGCAATATaGCTGCTCTCTCTTCGTATCTTGATTGAAAAGTTGGCTTTGAAC +
Preference number: 5 (lower is better)
Translates to: SSSIVLTFGMLDSAI*LLSLRILIEKLALN
Trigger: GTTCAAAGCCAACTTTTCAATCAAGATACGAAGAGAGAGCAGGCATATTGCACTATCCAACATGCCAAAGGTTAAGACAATTGAACTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000437043.8
ENST00000510309.1
ENST00000510373.5
ENST00000513084.5
CDS-3UTR CAA 90 bp ACCCTGTTTGACTTCATGCAGGCAGTCATGTCTGATGTACCTTTTCTTTTCTTTAAAATAGTCATCAAATaGCAGCTCTGGATATGTAGC +
Preference number: 5 (lower is better)
Translates to: TLFDFMQAVMSDVPFLFFKIVIK*QLWICS
Trigger: GCTACATATCCAGAGCTGCAATTTGATGACTATTTT...AAAGAAAAGAAAAGGTACATCAGACATGACTGCCTGCATGAAGTCAAACAGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS TCA 90 bp TTTTCAATACATGAATTTAATCAAACACCTCCCGGGCAGCTTCTGTaGTCTTTATCAGAGGTGATTATTCTCAGATTTTCCATGTCTGTA +
Preference number: 5 (lower is better)
Translates to: FSIHEFNQTPPGQLL*SLSEVIILRFSMSV
Trigger: TACAGACATGGAAAATCTGAGAATAATCACCTCTGATAAAGATCACAGAAGCTGCCCGGGAGGTGTTTGATTAAATTCATGTATTGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510373.5
CDS-3UTR CAA 90 bp GATCTCAAAAATCTACCCTTGAGGTACTTCATGAATGTAAGGCTTAAACCAAATCTCTCTCTTCGTATCTaGATTGAAAAGTTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: DLKNLPLRYFMNVRLKPNLSLRI*IEKLAL
Trigger: CAAAGCCAACTTTTCAATCAAGATACGAAGAGAGAG...ATTTGGTTTAAGCCTTACATTCATGAAGTACCTCAAGGGTAGATTTTTGAGATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437043.8
CDS GCA 72 bp TGGAGAGGAATGACCACACTGGGGAGCCTTAGCTCCTaGCAAGGAAATCGTTCCCCATTAGTGGCTACTGGG +
Preference number: 6 (lower is better)
Translates to: WRGMTTLGSLSS*QGNRSPLVATG
Trigger: CCCAGTAGCCACTAATGGGGAACGATTTCCTTGGCAGGAGCTAAGGCTCCCCAGTGTGGTCATTCCTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000510309.1
ENST00000510373.5
ENST00000513084.5
CDS CAA 90 bp ACAAGACGCCCCAAGGCTCCACATGATCTGATCCCTTTCTCCCTCTaGTTCGCTCTCCTCAGCTTACACTGGCCTTCCTCAACCAATCCC +
Preference number: 6 (lower is better)
Translates to: TRRPKAPHDLIPFSL*FALLSLHWPSSTNP
Trigger: GGGATTGGTTGAGGAAGGCCAGTGTAAGCTGAGGAGAGCGAACAAGAGGGAGAAAGGGATCAGATCATGTGGAGCCTTGGGGCGTCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507346.1
CDS CCA 72 bp GTGACCAGGTTGCCAAACCACTGGTGCGCCAGTTCATaGGCTATGACTCTGGTGACCCACAGTTTATCGGAA +
Preference number: 6 (lower is better)
Translates to: VTRLPNHWCASS*AMTLVTHSLSE
Trigger: TTCCGATAAACTGTGGGTCACCAGAGTCATAGCCCATGAACTGGCGCACCAGTGGTTTGGCAACCTGGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000508077.1
ENST00000510373.5
ENST00000513084.5
CDS TCA 72 bp AACTCCTTACAAGACGCCCCAAGGCTCCACATGATCTaGTCCCTTTCTCCCTCTTGTTCGCTCTCCTCAGCT +
Preference number: 6 (lower is better)
Translates to: NSLQDAPRLHMI*SLSPSCSLSSA
Trigger: AGCTGAGGAGAGCGAACAAGAGGGAGAAAGGGATCAGATCATGTGGAGCCTTGGGGCGTCTTGTAAGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507346.1
CDS TCA 72 bp GTCAAAACTCCTTACAAGACGCCCCAAGGCTCCACATaGTCTGATCCCTTTCTCCCTCTTGTTCGCTCTCCT +
Preference number: 6 (lower is better)
Translates to: VKTPYKTPQGST*SDPFLPLVRSP
Trigger: AGGAGAGCGAACAAGAGGGAGAAAGGGATCAGATCATGTGGAGCCTTGGGGCGTCTTGTAAGGAGTTTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507346.1
CDS TCA 72 bp GGATCCTGGCCCTGGGAAACCAAGCCGTCCACTCTATaGAGCATCCTTGATTCTTCTATTTCCCTCACCTCA +
Preference number: 6 (lower is better)
Translates to: GSWPWETKPSTL*SILDSSISLTS
Trigger: TGAGGTGAGGGAAATAGAAGAATCAAGGATGCTTCATAGAGTGGACGGCTTGGTTTCCCAGGGCCAGGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507346.1
CDS CAA 90 bp GCTATGACTCTGGTGACCCACAGTTTATCGGAAGCAGAAGAGGTCTaGGGGTCAAAAAGCAGTGACGTCTCCCTATATGTAATGAGGCCC +
Preference number: 6 (lower is better)
Translates to: AMTLVTHSLSEAEEV*GSKSSDVSLYVMRP
Trigger: GGGCCTCATTACATATAGGGAGACGTCACTGCTTTTTGACCCCAAGACCTCTTCTGCTTCCGATAAACTGTGGGTCACCAGAGTCATAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000508077.1
ENST00000510373.5
ENST00000513084.5
CDS GCA 72 bp GGTAGCATTGCTGACCAAGACTTCGATCTTCTCAGATaGAACAAAGTCCAGAGAGGTGAGATTGGGGTGGAC +
Preference number: 6 (lower is better)
Translates to: GSIADQDFDLLR*NKVQRGEIGVD
Trigger: GTCCACCCCAATCTCACCTCTCTGGACTTTGTTGCATCTGAGAAGATCGAAGTCTTGGTCAGCAATGCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000510309.1
ENST00000510373.5
ENST00000513084.5
CDS CAA 90 bp GATCCTGGCCCTGGGAAACCAAGCCGTCCACTCTATGAAGCATCCTaGATTCTTCTATTTCCCTCACCTCACATGACCAATATGTCAGCA +
Preference number: 6 (lower is better)
Translates to: DPGPGKPSRPLYEAS*ILLFPSPHMTNMSA
Trigger: TGCTGACATATTGGTCATGTGAGGTGAGGGAAATAGAAGAATCAAGGATGCTTCATAGAGTGGACGGCTTGGTTTCCCAGGGCCAGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507346.1
CDS CCA 72 bp AGCCACATAGTATTTCAGGTGAGGCGTAAGTTTCTCTaGAACCAGCAGTGCAATTTGTTCATGAGCAGGGTA +
Preference number: 6 (lower is better)
Translates to: SHIVFQVRRKFL*NQQCNLFMSRV
Trigger: TACCCTGCTCATGAACAAATTGCACTGCTGGTTCCAGAGAAACTTACGCCTCACCTGAAATACTATGTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000510309.1
ENST00000510373.5
ENST00000513084.5
CDS CCA 72 bp TGCCTGCAAAGCATAATGTGTTTGATTCCGTTTGTCTaGGGATGCATAGATGGACACCTTTGGCATGTTGGA +
Preference number: 6 (lower is better)
Translates to: CLQSIMCLIPFV*GCIDGHLWHVG
Trigger: TCCAACATGCCAAAGGTGTCCATCTATGCATCCCCAGACAAACGGAATCAAACACATTATGCTTTGCAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379904.8
CDS CAA 72 bp TGTTGTTTTGCCCTCCAAAATAACTGCCAAGTTCAATaGTTTCACTCCATAAGCACTGCCACTAGCCTGGCC +
Preference number: 6 (lower is better)
Translates to: CCFALQNNCQVQ*FHSISTATSLA
Trigger: GGCCAGGCTAGTGGCAGTGCTTATGGAGTGAAACAATTGAACTTGGCAGTTATTTTGGAGGGCAAAACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507346.1
CDS CAA 72 bp GTTCATCAAAGCAAGGGAAAGCCATGCGTGCCTGGGTaGGCTCAAAATCTGTTACTGCAAGAATTCTTGTTT +
Preference number: 6 (lower is better)
Translates to: VHQSKGKPCVPG*AQNLLLQEFLF
Trigger: AAACAAGAATTCTTGCAGTAACAGATTTTGAGCCAACCCAGGCACGCATGGCTTTCCCTTGCTTTGATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000510309.1
ENST00000510373.5
ENST00000513084.5
CDS CAA 90 bp GTATTTCAGGTGAGGCGTAAGTTTCTCTGGAACCAGCAGTGCAATTaGTTCATGAGCAGGGTAACTCAAAACTTTCAGTTCTTTTCCTGG +
Preference number: 6 (lower is better)
Translates to: VFQVRRKFLWNQQCN*FMSRVTQNFQFFSW
Trigger: CCAGGAAAAGAACTGAAAGTTTTGAGTTACCCTGCTCATGAACAAATTGCACTGCTGGTTCCAGAGAAACTTACGCCTCACCTGAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000510309.1
ENST00000510373.5
ENST00000513084.5
CDS GCA 72 bp TTTCAGGTGAGGCGTAAGTTTCTCTGGAACCAGCAGTaGAATTTGTTCATGAGCAGGGTAACTCAAAACTTT +
Preference number: 6 (lower is better)
Translates to: FQVRRKFLWNQQ*NLFMSRVTQNF
Trigger: AAAGTTTTGAGTTACCCTGCTCATGAACAAATTGCACTGCTGGTTCCAGAGAAACTTACGCCTCACCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000510309.1
ENST00000510373.5
ENST00000513084.5
CDS GCA 72 bp GTCAGCAATCTCTGTTGTTTTGCCCTCCAAAATAACTaGCAAGTTCAATTGTTTCACTCCATAAGCACTGCC +
Preference number: 6 (lower is better)
Translates to: VSNLCCFALQNN*QVQLFHSISTA
Trigger: GGCAGTGCTTATGGAGTGAAACAATTGAACTTGGCAGTTATTTTGGAGGGCAAAACAACAGAGATTGCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507346.1
CDS TCA 72 bp TCACAAACCTCTTGCAACTTATCCTTGGAAGAAAAGTaGGCTGTTGTGCCAGAGATGATCATCCTTATGTCA +
Preference number: 6 (lower is better)
Translates to: SQTSCNLSLEEK*AVVPEMIILMS
Trigger: TGACATAAGGATGATCATCTCTGGCACAACAGCTCACTTTTCTTCCAAGGATAAGTTGCAAGAGGTTTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512869.1
CDS TCA 72 bp CTAGGTCAGGCTATTCCACAGATCTCTTCTACTCTGTaGCTCTCTTTATCCTTACCATGTTACTTGTCATCT +
Preference number: 6 (lower is better)
Translates to: LGQAIPQISSTL*LSLSLPCYLSS
Trigger: AGATGACAAGTAACATGGTAAGGATAAAGAGAGTCACAGAGTAGAAGAGATCTGTGGAATAGCCTGACCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513084.5
CDS CCA 72 bp GTGATTTCAAGATCTTTGCTGTGCAAGATGATAAACTaGGTAGCATTGCTGACCAAGACTTCGATCTTCTCA +
Preference number: 6 (lower is better)
Translates to: VISRSLLCKMIN*VALLTKTSIFS
Trigger: TGAGAAGATCGAAGTCTTGGTCAGCAATGCTACCCAGTTTATCATCTTGCACAGCAAAGATCTTGAAATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000510309.1
ENST00000510373.5
ENST00000513084.5
CDS CAA 72 bp TTGGATAGTGCAATATGCCTGCTCTCTCTTCGTATCTaGATTGAAAAGTTGGCTTTGAACAACGGTTCATCA +
Preference number: 6 (lower is better)
Translates to: LDSAICLLSLRI*IEKLALNNGSS
Trigger: TGATGAACCGTTGTTCAAAGCCAACTTTTCAATCAAGATACGAAGAGAGAGCAGGCATATTGCACTATCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000379904.8
ENST00000437043.8
ENST00000510309.1
ENST00000510373.5
ENST00000513084.5
CDS CAA 72 bp CCTCACATGACCAATATGTCAGCAATCTCTGTTGTTTaGCCCTCCAAAATAACTGCCAAGTTCAATTGTTTC +
Preference number: 6 (lower is better)
Translates to: PHMTNMSAISVV*PSKITAKFNCF
Trigger: GAAACAATTGAACTTGGCAGTTATTTTGGAGGGCAAAACAACAGAGATTGCTGACATATTGGTCATGTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507346.1