RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ERAP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000164307

Ensembl transcript IDs: ENST00000296754.7, ENST00000443439.7, ENST00000503311.1, ENST00000503921.5, ENST00000507154.1, ENST00000507859.1, ENST00000508227.5, ENST00000512852.1, ENST00000514604.5

Found 340 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAAGGGCAAGAAAGCTTGATGACTTGGCCTTTACAAGTCAGCCCCTaGGCATGGAGCAAGGAAGAGGGATGGGCAGCGGGTCTGGAGGGG +
Preference number: 1 (lower is better)
Translates to: KGQESLMTWPLQVSP*AWSKEEGWAAGLEG
Trigger: CCCCTCCAGACCCGCTGCCCATCCCTCTTCCTTGCTCCATGCCCAGGGGCTGACTTGTAAAGGCCAAGTCATCAAGCTTTCTTGCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
3UTR TCA 90 bp CTAGTAAAAGCCAGACTCCCACTGAGGCCACTAATCCTGAAGGGATaGGGAGGGAGCAGTTACCAAAATCCAGAGGTGGAGAAGGCTGTG +
Preference number: 1 (lower is better)
Translates to: LVKARLPLRPLILKG*GGSSYQNPEVEKAV
Trigger: CACAGCCTTCTCCACCTCTGGATTTTGGTAACTGCTCCCTCCTCATCCCTTCAGGATTAGTGGCCTCAGTGGGAGTCTGGCTTTTACTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443439.7
3UTR GCA 90 bp TACTTTATTCTTCTGTGGCAGGGAACCCAACACTTGGGTTTACGTTaGAGGGCAACACCTGTGATGAACAAAACACATGGTAGCGATAGC +
Preference number: 1 (lower is better)
Translates to: YFILLWQGTQHLGLR*RATPVMNKTHGSDS
Trigger: GCTATCGCTACCATGTGTTTTGTTCATCACAGGTGTTGCCCTGCAACGTAAACCCAAGTGTTGGGTTCCCTGCCACAGAAGAATAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
3UTR TCA 90 bp TGCTGTGAGGCAAGGCTGTGGGACCAAAGCTTTTCCAGACTTCCTTaGCTAATCACCTGTGCAATACCAAATTATACATTACCAAGGAGA +
Preference number: 1 (lower is better)
Translates to: CCEARLWDQSFSRLP*LITCAIPNYTLPRR
Trigger: TCTCCTTGGTAATGTATAATTTGGTATTGCACAGGTGATTAGTCAAGGAAGTCTGGAAAAGCTTTGGTCCCACAGCCTTGCCTCACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296754.7
3UTR TCA 90 bp CCATCTCCTTTGGTTGAGAACAGTGCCTCATTTGCTAGATGGAGATaGAGTAACTTTAGCGAAGTCAGCTATGCTTCCATTCCGTTTGAT +
Preference number: 1 (lower is better)
Translates to: PSPLVENSASFARWR*SNFSEVSYASIPFD
Trigger: ATCAAACGGAATGGAAGCATAGCTGACTTCGCTAAAGTTACTTCATCTCCATCTAGCAAATGAGGCACTGTTCTCAACCAAAGGAGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296754.7
3UTR GCA 90 bp GCTGTGGGACCAAAGCTTTTCCAGACTTCCTTGACTAATCACCTGTaGAATACCAAATTATACATTACCAAGGAGACCACAGCACATCAA +
Preference number: 1 (lower is better)
Translates to: AVGPKLFQTSLTNHL*NTKLYITKETTAHQ
Trigger: TTGATGTGCTGTGGTCTCCTTGGTAATGTATAATTTGGTATTGCACAGGTGATTAGTCAAGGAAGTCTGGAAAAGCTTTGGTCCCACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296754.7
3UTR GCA 90 bp AATTCTGGCAAGCAAGGCCATGGGAAAACAGGCATGCTTATTCATTaGTTTTCGCAGTATGAATTCCTAGCAACATTTGAGAGGGCAGTT +
Preference number: 1 (lower is better)
Translates to: NSGKQGHGKTGMLIH*FSQYEFLATFERAV
Trigger: AACTGCCCTCTCAAATGTTGCTAGGAATTCATACTGCGAAAAGCAATGAATAAGCATGCCTGTTTTCCCATGGCCTTGCTTGCCAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
3UTR-3UTR CCA 90 bp GGAATCAGGGAAGAACACCTCCACCTACTACCTCCTCCGACCCCAGCTCCAGCTAGCAAGGAAGAGGGATaGGCAGCGGGTCTGGAGGGG +
Preference number: 2 (lower is better)
Translates to: GIREEHLHLLPPPTPAPASKEEG*AAGLEG
Trigger: CCCCTCCAGACCCGCTGCCCATCCCTCTTCCTTGCT...AGCTGGAGCTGGGGTCGGAGGAGGTAGTAGGTGGAGGTGTTCTTCCCTGATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
3UTR-3UTR TCA 90 bp GCTTCAACGACCCAAGCTGGAGCCCCACCCCGTGATACCTCGGTAAGCAGCACACCCATCTCCTTTGGTTaGGAACAGTGCCTCATTTGC +
Preference number: 2 (lower is better)
Translates to: ASTTQAGAPPRDTSVSSTPISFG*EQCLIC
Trigger: GCAAATGAGGCACTGTTCTCAACCAAAGGAGATGGG...TGTGCTGCTTACCGAGGTATCACGGGGTGGGGCTCCAGCTTGGGTCGTTGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
3UTR-3UTR CCA 90 bp CTCTCCGGCTCCCCACTGACCAACATCCAAAGGGCAAGAAAGCTTGATGACTTGGTCAGCCCCTGGGCATaGAGCAAGGAAGAGGGATGG +
Preference number: 2 (lower is better)
Translates to: LSGSPLTNIQRARKLDDLVSPWA*SKEEGW
Trigger: CCATCCCTCTTCCTTGCTCCATGCCCAGGGGCTGAC...CAAGTCATCAAGCTTTCTTGCCCTTTGGATGTTGGTCAGTGGGGAGCCGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443439.7
3UTR-3UTR TCA 90 bp GCTTCAACGACCCAAGCTGGAGCCCCACCCCGTGATACCTCGGTAAGCAGCACATTTGCTAGATGGAGATaGAGTAACTTTAGCGAAGTC +
Preference number: 2 (lower is better)
Translates to: ASTTQAGAPPRDTSVSSTFARWR*SNFSEV
Trigger: GACTTCGCTAAAGTTACTTCATCTCCATCTAGCAAA...TGTGCTGCTTACCGAGGTATCACGGGGTGGGGCTCCAGCTTGGGTCGTTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
3UTR-3UTR CCA 90 bp CTCTCCGGCTCCCCACTGACCAACATCCAAAGGGCAAGAAAGCTTGATGACTTGTGGGGTACAGGGTTTTaGACACGGGTGCTTAAGCAT +
Preference number: 2 (lower is better)
Translates to: LSGSPLTNIQRARKLDDLWGTGF*TRVLKH
Trigger: ATGCTTAAGCACCCGTGTCCAAAACCCTGTACCCCA...CAAGTCATCAAGCTTTCTTGCCCTTTGGATGTTGGTCAGTGGGGAGCCGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443439.7
3UTR-3UTR TCA 90 bp TTGGCCTTTACAAGTCAGCCCCTGGGCATGGAGCAAGGAAGAGGGATGGGCAGCGCGATAGCCCATTCATaGAAAACTAACAGCTATTCT +
Preference number: 2 (lower is better)
Translates to: LAFTSQPLGMEQGRGMGSAIAHS*KTNSYS
Trigger: AGAATAGCTGTTAGTTTTTCATGAATGGGCTATCGC...GCTGCCCATCCCTCTTCCTTGCTCCATGCCCAGGGGCTGACTTGTAAAGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443439.7
3UTR-3UTR CCA 90 bp CCACCCCGTGATACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTGATCCCCATCTCCTTTaGTTGAGAACAGTGCCTCAT +
Preference number: 2 (lower is better)
Translates to: PPRDTSVSSTSYLGDKCFDPHLL*LRTVPH
Trigger: ATGAGGCACTGTTCTCAACCAAAGGAGATGGGGATC...AAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGTATCACGGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296754.7
3UTR CAA 90 bp CCTAAACCAGATCCCCATCTCCTTTGGTTGAGAACAGTGCCTCATTaGCTAGATGGAGATGAAGTAACTTTAGCGAAGTCAGCTATGCTT +
Preference number: 2 (lower is better)
Translates to: PKPDPHLLWLRTVPH*LDGDEVTLAKSAML
Trigger: AAGCATAGCTGACTTCGCTAAAGTTACTTCATCTCCATCTAGCAAATGAGGCACTGTTCTCAACCAAAGGAGATGGGGATCTGGTTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296754.7
3UTR CAA 90 bp AGAAGAATAAGGTACTTTATTCTTCTGTGGCAGGGAACCCAACACTaGGGTTTACGTTGCAGGGCAACACCTGTGATGAACAAAACACAT +
Preference number: 2 (lower is better)
Translates to: RRIRYFILLWQGTQH*GLRCRATPVMNKTH
Trigger: ATGTGTTTTGTTCATCACAGGTGTTGCCCTGCAACGTAAACCCAAGTGTTGGGTTCCCTGCCACAGAAGAATAAAGTACCTTATTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
3UTR-3UTR TCA 90 bp CCACCCCGTGATACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTTGCTTCCATTCCGTTTaGTGTAGCATCAAAGCATAT +
Preference number: 2 (lower is better)
Translates to: PPRDTSVSSTSYLGDKCFCFHSV*CSIKAY
Trigger: ATATGCTTTGATGCTACATCAAACGGAATGGAAGCA...AAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGTATCACGGGGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296754.7
3UTR-3UTR TCA 90 bp ACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACATTTTCCAGACTTCCTTaGCTAATCACCTGTGCAATA +
Preference number: 2 (lower is better)
Translates to: TSVSSTSYLGDKCFCAATFSRLP*LITCAI
Trigger: TATTGCACAGGTGATTAGTCAAGGAAGTCTGGAAAA...TGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296754.7
3UTR-3UTR CCA 90 bp CCACCCCGTGATACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTGATGATTTAGCGAGATaGCAGAGATTAACTTTGAAA +
Preference number: 2 (lower is better)
Translates to: PPRDTSVSSTSYLGDKCFDDLAR*QRLTLK
Trigger: TTTCAAAGTTAATCTCTGCCATCTCGCTAAATCATC...AAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGTATCACGGGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
3UTR-3UTR CAA 90 bp GGAATCAGGGAAGAACACCTCCACCTACTACCTCCTCCGACCCCAGCTCCAGCTCAGGGAACCCAACACTaGGGTTTACGTTGCAGGGCA +
Preference number: 3 (lower is better)
Translates to: GIREEHLHLLPPPTPAPAQGTQH*GLRCRA
Trigger: TGCCCTGCAACGTAAACCCAAGTGTTGGGTTCCCTG...AGCTGGAGCTGGGGTCGGAGGAGGTAGTAGGTGGAGGTGTTCTTCCCTGATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
3UTR CCA 72 bp TTGATGACTTGGCCTTTACAAGTCAGCCCCTGGGCATaGAGCAAGGAAGAGGGATGGGCAGCGGGTCTGGAG +
Preference number: 3 (lower is better)
Translates to: LMTWPLQVSPWA*SKEEGWAAGLE
Trigger: CTCCAGACCCGCTGCCCATCCCTCTTCCTTGCTCCATGCCCAGGGGCTGACTTGTAAAGGCCAAGTCATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
3UTR TCA 72 bp CCCAGCTTCAACGACCCAAGCTGGAGCCCCACCCCGTaGTACCTCGGTAAGCAGCACATCTTATTTGGGAGA +
Preference number: 3 (lower is better)
Translates to: PSFNDPSWSPTP*YLGKQHILFGR
Trigger: TCTCCCAAATAAGATGTGCTGCTTACCGAGGTATCACGGGGTGGGGCTCCAGCTTGGGTCGTTGAAGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
3UTR TCA 72 bp GCCAGACTCCCACTGAGGCCACTAATCCTGAAGGGATaGGGAGGGAGCAGTTACCAAAATCCAGAGGTGGAG +
Preference number: 3 (lower is better)
Translates to: ARLPLRPLILKG*GGSSYQNPEVE
Trigger: CTCCACCTCTGGATTTTGGTAACTGCTCCCTCCTCATCCCTTCAGGATTAGTGGCCTCAGTGGGAGTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
3UTR GCA 72 bp CTTCTGTGGCAGGGAACCCAACACTTGGGTTTACGTTaGAGGGCAACACCTGTGATGAACAAAACACATGGT +
Preference number: 3 (lower is better)
Translates to: LLWQGTQHLGLR*RATPVMNKTHG
Trigger: ACCATGTGTTTTGTTCATCACAGGTGTTGCCCTGCAACGTAAACCCAAGTGTTGGGTTCCCTGCCACAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
3UTR-3UTR CAA 90 bp ACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACACCCCATCTCCTTTGGTaGAGAACAGTGCCTCATTTG +
Preference number: 3 (lower is better)
Translates to: TSVSSTSYLGDKCFCAATPHLLW*RTVPHL
Trigger: CAAATGAGGCACTGTTCTCAACCAAAGGAGATGGGG...TGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296754.7
3UTR-3UTR CAA 90 bp AACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTACACTCAACAAAATGTaGGTGATTAGAGATAACAGG +
Preference number: 3 (lower is better)
Translates to: NPVIVRLSLRSRCSLFSSTLNKM*VIRDNR
Trigger: CCTGTTATCTCTAATCACCAACATTTTGTTGAGTGT...ACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
3UTR TCA 72 bp TTGGTTGAGAACAGTGCCTCATTTGCTAGATGGAGATaGAGTAACTTTAGCGAAGTCAGCTATGCTTCCATT +
Preference number: 3 (lower is better)
Translates to: LVENSASFARWR*SNFSEVSYASI
Trigger: AATGGAAGCATAGCTGACTTCGCTAAAGTTACTTCATCTCCATCTAGCAAATGAGGCACTGTTCTCAACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CCA 90 bp AGACCCTCAGGGGAGGCCAGCCCGAGGCATCCCGCAAGGGAATCAGGGAAGAACACCTACCTGGGGTTCTaGGGCCGCCCTCACCCTTGC +
Preference number: 4 (lower is better)
Translates to: RPSGEASPRHPARESGKNTYLGF*GRPHPC
Trigger: GCAAGGGTGAGGGCGGCCCCAGAACCCCAGGTAGGT...GTTCTTCCCTGATTCCCTTGCGGGATGCCTCGGGCTGGCCTCCCCTGAGGGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CCA 90 bp GCTTCAACGACCCAAGCTGGAGCCCCACCCCGTGATACCTCGGTAAGCAGCACAAAGGGTAAACGGGAGTaGGGCCGAGCGAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: ASTTQAGAPPRDTSVSSTKGKRE*GRAREA
Trigger: GGCTTCCCTCGCTCGGCCCCACTCCCGTTTACCCTT...TGTGCTGCTTACCGAGGTATCACGGGGTGGGGCTCCAGCTTGGGTCGTTGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR GCA 90 bp GCTTCAACGACCCAAGCTGGAGCCCCACCCCGTGATACCTCGGTAAGCAGCACACCCCACAGCAAACACTaGCAAGGTCACGTCGACAGG +
Preference number: 4 (lower is better)
Translates to: ASTTQAGAPPRDTSVSSTPHSKH*QGHVDR
Trigger: CCTGTCGACGTGACCTTGGCAGTGTTTGCTGTGGGG...TGTGCTGCTTACCGAGGTATCACGGGGTGGGGCTCCAGCTTGGGTCGTTGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR GCA 90 bp GCTTCAACGACCCAAGCTGGAGCCCCACCCCGTGATACCTCGGTAAGCAGCACAAATCCCAGCCTTCTGTaGTCTGGGCCCCCACAGCAA +
Preference number: 4 (lower is better)
Translates to: ASTTQAGAPPRDTSVSSTNPSLL*SGPPQQ
Trigger: TTGCTGTGGGGGCCCAGAGCACAGAAGGCTGGGATT...TGTGCTGCTTACCGAGGTATCACGGGGTGGGGCTCCAGCTTGGGTCGTTGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp TTGGCCTTTACAAGTCAGCCCCTGGGCATGGAGCAAGGAAGAGGGATGGGCAGCGGTGACTATGCAGGATaGTGGTGCTGGTGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: LAFTSQPLGMEQGRGMGSGDYAG*WCWWAD
Trigger: GTCAGCCCACCAGCACCATCATCCTGCATAGTCACC...GCTGCCCATCCCTCTTCCTTGCTCCATGCCCAGGGGCTGACTTGTAAAGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp GCTTCAACGACCCAAGCTGGAGCCCCACCCCGTGATACCTCGGTAAGCAGCACAGCGAGGAGTAGTAGTTaGCTCCGCAGCATTCGCTCT +
Preference number: 4 (lower is better)
Translates to: ASTTQAGAPPRDTSVSSTARSSS*LRSIRS
Trigger: AGAGCGAATGCTGCGGAGTCAACTACTACTCCTCGC...TGTGCTGCTTACCGAGGTATCACGGGGTGGGGCTCCAGCTTGGGTCGTTGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp GAGGTGGAGAAGGCTGTGTGGAAAAGAGGGTCCCCTCTCGGAGCTAAGACCCTCGCGAGGAGTAGTAGTTaGCTCCGCAGCATTCGCTCT +
Preference number: 4 (lower is better)
Translates to: EVEKAVWKRGSPLGAKTLARSSS*LRSIRS
Trigger: AGAGCGAATGCTGCGGAGTCAACTACTACTCCTCGC...GAGGGTCTTAGCTCCGAGAGGGGACCCTCTTTTCCACACAGCCTTCTCCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CCA 90 bp TCTGGAGGGGTGAGCCGGGAGAGCTTTAACCCAGTCATCGTCCGGCTTAGTCTCGTGGAGAAGGCTGTGTaGAAAAGAGGGTCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: SGGVSRESFNPVIVRLSLVEKAV*KRGSPL
Trigger: GAGAGGGGACCCTCTTTTCCACACAGCCTTCTCCAC...GAGACTAAGCCGGACGATGACTGGGTTAAAGCTCTCCCGGCTCACCCCTCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp TCTGGAGGGGTGAGCCGGGAGAGCTTTAACCCAGTCATCGTCCGGCTTAGTCTCGATGCTTCAGTGCTCTaGCACCATGAAGGAGTGGAC +
Preference number: 4 (lower is better)
Translates to: SGGVSRESFNPVIVRLSLDASVL*HHEGVD
Trigger: GTCCACTCCTTCATGGTGTCAGAGCACTGAAGCATC...GAGACTAAGCCGGACGATGACTGGGTTAAAGCTCTCCCGGCTCACCCCTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp GCTTCAACGACCCAAGCTGGAGCCCCACCCCGTGATACCTCGGTAAGCAGCACAACATCCACCCCTTCCTaGTGCCAATGTGAGGATGAA +
Preference number: 4 (lower is better)
Translates to: ASTTQAGAPPRDTSVSSTTSTPS*CQCEDE
Trigger: TTCATCCTCACATTGGCATCAGGAAGGGGTGGATGT...TGTGCTGCTTACCGAGGTATCACGGGGTGGGGCTCCAGCTTGGGTCGTTGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CCA 90 bp GCTTCAACGACCCAAGCTGGAGCCCCACCCCGTGATACCTCGGTAAGCAGCACAATGGCATATTGGAGATaGCTAGGTGCCTTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: ASTTQAGAPPRDTSVSSTMAYWR*LGALAL
Trigger: GAGAGCCAAGGCACCTAGCCATCTCCAATATGCCAT...TGTGCTGCTTACCGAGGTATCACGGGGTGGGGCTCCAGCTTGGGTCGTTGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CCA 90 bp GCTTCAACGACCCAAGCTGGAGCCCCACCCCGTGATACCTCGGTAAGCAGCACACAGTGGGTATCCTACTaGGTTCCTGCCAATGAGTGT +
Preference number: 4 (lower is better)
Translates to: ASTTQAGAPPRDTSVSSTQWVSY*VPANEC
Trigger: ACACTCATTGGCAGGAACCCAGTAGGATACCCACTG...TGTGCTGCTTACCGAGGTATCACGGGGTGGGGCTCCAGCTTGGGTCGTTGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp TTGGCCTTTACAAGTCAGCCCCTGGGCATGGAGCAAGGAAGAGGGATGGGCAGCGATATCTGCAGGTGGTaGCTATGCAGGATGATGGTG +
Preference number: 4 (lower is better)
Translates to: LAFTSQPLGMEQGRGMGSDICRW*LCRMMV
Trigger: CACCATCATCCTGCATAGTCACCACCTGCAGATATC...GCTGCCCATCCCTCTTCCTTGCTCCATGCCCAGGGGCTGACTTGTAAAGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR GCA 90 bp CTCTCCGGCTCCCCACTGACCAACATCCAAAGGGCAAGAAAGCTTGATGACTTGAATCCCAGCCTTCTGTaGTCTGGGCCCCCACAGCAA +
Preference number: 4 (lower is better)
Translates to: LSGSPLTNIQRARKLDDLNPSLL*SGPPQQ
Trigger: TTGCTGTGGGGGCCCAGAGCACAGAAGGCTGGGATT...CAAGTCATCAAGCTTTCTTGCCCTTTGGATGTTGGTCAGTGGGGAGCCGGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CCA 90 bp GCTTCAACGACCCAAGCTGGAGCCCCACCCCGTGATACCTCGGTAAGCAGCACAGACACCATGAAGGAGTaGACACAGTTAAGAGAGCCA +
Preference number: 4 (lower is better)
Translates to: ASTTQAGAPPRDTSVSSTDTMKE*TQLREP
Trigger: TGGCTCTCTTAACTGTGTCCACTCCTTCATGGTGTC...TGTGCTGCTTACCGAGGTATCACGGGGTGGGGCTCCAGCTTGGGTCGTTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CCA 90 bp GCTTCAACGACCCAAGCTGGAGCCCCACCCCGTGATACCTCGGTAAGCAGCACACAGCAAGATCTTGTTTaGGTAGGGGATACGGTATGC +
Preference number: 4 (lower is better)
Translates to: ASTTQAGAPPRDTSVSSTQQDLV*VGDTVC
Trigger: GCATACCGTATCCCCTACCCAAACAAGATCTTGCTG...TGTGCTGCTTACCGAGGTATCACGGGGTGGGGCTCCAGCTTGGGTCGTTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CCA 90 bp TCTGGAGGGGTGAGCCGGGAGAGCTTTAACCCAGTCATCGTCCGGCTTAGTCTCTGGGGTACAGGGTTTTaGACACGGGTGCTTAAGCAT +
Preference number: 4 (lower is better)
Translates to: SGGVSRESFNPVIVRLSLWGTGF*TRVLKH
Trigger: ATGCTTAAGCACCCGTGTCCAAAACCCTGTACCCCA...GAGACTAAGCCGGACGATGACTGGGTTAAAGCTCTCCCGGCTCACCCCTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR TCA 90 bp GCTTCAACGACCCAAGCTGGAGCCCCACCCCGTGATACCTCGGTAAGCAGCACACATAATGAACTGGGATaGCGTACTCAGGAAGTCGTA +
Preference number: 4 (lower is better)
Translates to: ASTTQAGAPPRDTSVSSTHNELG*RTQEVV
Trigger: TACGACTTCCTGAGTACGTCATCCCAGTTCATTATG...TGTGCTGCTTACCGAGGTATCACGGGGTGGGGCTCCAGCTTGGGTCGTTGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp GCTTCAACGACCCAAGCTGGAGCCCCACCCCGTGATACCTCGGTAAGCAGCACACCTCTTCTGGGAGGATaGGCACATCTGTTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: ASTTQAGAPPRDTSVSSTPLLGG*AHLFLF
Trigger: AAACAAAAACAGATGTGCTCATCCTCCCAGAAGAGG...TGTGCTGCTTACCGAGGTATCACGGGGTGGGGCTCCAGCTTGGGTCGTTGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR GCA 90 bp GCTTCAACGACCCAAGCTGGAGCCCCACCCCGTGATACCTCGGTAAGCAGCACATCGTCTGTCCATGTCTaGTTATCAATGAGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: ASTTQAGAPPRDTSVSSTSSVHV*LSMRSL
Trigger: AAGGGACCTCATTGATAAGCAGACATGGACAGACGA...TGTGCTGCTTACCGAGGTATCACGGGGTGGGGCTCCAGCTTGGGTCGTTGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CCA 90 bp TCTGGAGGGGTGAGCCGGGAGAGCTTTAACCCAGTCATCGTCCGGCTTAGTCTCGTACCCATTACCATGTaGGCTATGGAAGATGAGCCA +
Preference number: 4 (lower is better)
Translates to: SGGVSRESFNPVIVRLSLVPITM*AMEDEP
Trigger: TGGCTCATCTTCCATAGCCCACATGGTAATGGGTAC...GAGACTAAGCCGGACGATGACTGGGTTAAAGCTCTCCCGGCTCACCCCTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR TCA 90 bp CCACCCCGTGATACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTCCCCAGGACCGAAAGTaGAAGTGGAGCCCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: PPRDTSVSSTSYLGDKCFPQDRK*KWSPGS
Trigger: GCTCCCCGGGCTCCACTTTCACTTTCGGTCCTGGGG...AAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGTATCACGGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp AGACCCTCAGGGGAGGCCAGCCCGAGGCATCCCGCAAGGGAATCAGGGAAGAACGGGGATACGGTATGCTaGAATAATCCTCATAAAATT +
Preference number: 4 (lower is better)
Translates to: RPSGEASPRHPARESGKNGDTVC*NNPHKI
Trigger: AATTTTATGAGGATTATTTCAGCATACCGTATCCCC...GTTCTTCCCTGATTCCCTTGCGGGATGCCTCGGGCTGGCCTCCCCTGAGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp CCAGGTGTTCATTGTTCAGTAGTCGACTATTCAGAGTCTTTCGAGGAGACTGATGCGGGTCTGGAGGGGTaGGCCGGGAGAGCTTTAACC +
Preference number: 4 (lower is better)
Translates to: PGVHCSVVDYSESFEETDAGLEG*AGRALT
Trigger: GGTTAAAGCTCTCCCGGCTCACCCCTCCAGACCCGC...ATCAGTCTCCTCGAAAGACTCTGAATAGTCGACTACTGAACAATGAACACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR GCA 90 bp GCTTCAACGACCCAAGCTGGAGCCCCACCCCGTGATACCTCGGTAAGCAGCACAAAAGGCCATTCTAGCTaGAGTGGGTTCAAATTGTGT +
Preference number: 4 (lower is better)
Translates to: ASTTQAGAPPRDTSVSSTKGHSS*SGFKLC
Trigger: ACACAATTTGAACCCACTGCAGCTAGAATGGCCTTT...TGTGCTGCTTACCGAGGTATCACGGGGTGGGGCTCCAGCTTGGGTCGTTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR GCA 90 bp GAGGTGGAGAAGGCTGTGTGGAAAAGAGGGTCCCCTCTCGGAGCTAAGACCCTCGCTGACGAGCTGAAATaGATTGTTAATGAGACTCGC +
Preference number: 4 (lower is better)
Translates to: EVEKAVWKRGSPLGAKTLADELK*IVNETR
Trigger: GCGAGTCTCATTAACAATGCATTTCAGCTCGTCAGC...GAGGGTCTTAGCTCCGAGAGGGGACCCTCTTTTCCACACAGCCTTCTCCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CCA 90 bp GCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAACTAGAAAGAAGGCGGGGAAGCCCCTaGCTAAGGCGGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: AAHLIWEINVFAQPQLERRRGSP*LRRELG
Trigger: CCCCAGCTCCCGCCTTAGCCAGGGGCTTCCCCGCCT...TCTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CCA 90 bp TCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGACTATTCAGAGAGCAAGGAAGAGGGATaGGCAGCGGGTCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SGLVSDPGVHCSVVDYSESKEEG*AAGLEG
Trigger: CCCCTCCAGACCCGCTGCCCATCCCTCTTCCTTGCT...CTCTGAATAGTCGACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp GCTTCAACGACCCAAGCTGGAGCCCCACCCCGTGATACCTCGGTAAGCAGCACATGTAGTCTGAGATTCTaGTGGATTTTCATCCTGTTG +
Preference number: 4 (lower is better)
Translates to: ASTTQAGAPPRDTSVSSTCSLRF*WIFILL
Trigger: CAACAGGATGAAAATCCATCAGAATCTCAGACTACA...TGTGCTGCTTACCGAGGTATCACGGGGTGGGGCTCCAGCTTGGGTCGTTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp CTGATGAAACAGTTTATGAATGATAAACATGGGGTACAGGGTTTTGGACACGGGGCGGGTCTGGAGGGGTaGGCCGGGAGAGCTTTAACC +
Preference number: 4 (lower is better)
Translates to: LMKQFMNDKHGVQGFGHGAGLEG*AGRALT
Trigger: GGTTAAAGCTCTCCCGGCTCACCCCTCCAGACCCGC...CCCGTGTCCAAAACCCTGTACCCCATGTTTATCATTCATAAACTGTTTCATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR CCA 90 bp GCTTCAACGACCCAAGCTGGAGCCCCACCCCGTGATACCTCGGTAAGCAGCACATTTAGCAAAAATCGATaGACCATGTCGGATTTGCTG +
Preference number: 4 (lower is better)
Translates to: ASTTQAGAPPRDTSVSSTFSKNR*TMSDLL
Trigger: CAGCAAATCCGACATGGTCCATCGATTTTTGCTAAA...TGTGCTGCTTACCGAGGTATCACGGGGTGGGGCTCCAGCTTGGGTCGTTGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CCA 90 bp GCTTCAACGACCCAAGCTGGAGCCCCACCCCGTGATACCTCGGTAAGCAGCACAATAAAAGTCAAATTCTaGCAAGCAAGGCCATGGGAA +
Preference number: 4 (lower is better)
Translates to: ASTTQAGAPPRDTSVSSTIKVKF*QARPWE
Trigger: TTCCCATGGCCTTGCTTGCCAGAATTTGACTTTTAT...TGTGCTGCTTACCGAGGTATCACGGGGTGGGGCTCCAGCTTGGGTCGTTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CCA 90 bp GAGGTGGAGAAGGCTGTGTGGAAAAGAGGGTCCCCTCTCGGAGCTAAGACCCTCGAGATAACAGGAACCTaGCAAGGGAGGAATTTTTAC +
Preference number: 4 (lower is better)
Translates to: EVEKAVWKRGSPLGAKTLEITGT*QGRNFY
Trigger: GTAAAAATTCCTCCCTTGCCAGGTTCCTGTTATCTC...GAGGGTCTTAGCTCCGAGAGGGGACCCTCTTTTCCACACAGCCTTCTCCACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp GGGAGAGCTTTAACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGGGCTGACTGGCTGTaGTTTCTACTTTCGTGGTTC +
Preference number: 4 (lower is better)
Translates to: GRALTQSSSGLVSDPGVHWADWL*FLLSWF
Trigger: GAACCACGAAAGTAGAAATCACAGCCAGTCAGCCCA...ATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTTAAAGCTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp GGGAGAGCTTTAACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATGGGCCACAGTCATTGTaGTGCCAAGCTTACTTGATG +
Preference number: 4 (lower is better)
Translates to: GRALTQSSSGLVSDPGVHGPQSL*CQAYLM
Trigger: CATCAAGTAAGCTTGGCATCACAATGACTGTGGCCC...ATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTTAAAGCTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp TTGGCCTTTACAAGTCAGCCCCTGGGCATGGAGCAAGGAAGAGGGATGGGCAGCAGCTCATTCAAACCTTaGAACACGGGCATAATTTCA +
Preference number: 4 (lower is better)
Translates to: LAFTSQPLGMEQGRGMGSSSFKP*NTGIIS
Trigger: TGAAATTATGCCCGTGTTTCAAGGTTTGAATGAGCT...GCTGCCCATCCCTCTTCCTTGCTCCATGCCCAGGGGCTGACTTGTAAAGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp TCTGGAGGGGTGAGCCGGGAGAGCTTTAACCCAGTCATCGTCCGGCTTAGTCTCGATAGGTTCCTCAGGTaGCCAAAACTGAAAATCAAT +
Preference number: 4 (lower is better)
Translates to: SGGVSRESFNPVIVRLSLDRFLR*PKLKIN
Trigger: ATTGATTTTCAGTTTTGGTCACCTGAGGAACCTATC...GAGACTAAGCCGGACGATGACTGGGTTAAAGCTCTCCCGGCTCACCCCTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR GCA 90 bp CCACCCCGTGATACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTCTCGGGAGCCAGCAGTaGAATTTGCTCCTGACGGGG +
Preference number: 4 (lower is better)
Translates to: PPRDTSVSSTSYLGDKCFLGSQQ*NLLLTG
Trigger: CCCCGTCAGGAGCAAATTGCACTGCTGGCTCCCGAG...AAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGTATCACGGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR GCA 90 bp TCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGACTATCCCCACAGCAAACACTaGCAAGGTCACGTCGACAGG +
Preference number: 4 (lower is better)
Translates to: SSSGLVSDPGVHCSVVDYPHSKH*QGHVDR
Trigger: CCTGTCGACGTGACCTTGGCAGTGTTTGCTGTGGGG...ATAGTCGACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR GCA 90 bp GCTTCAACGACCCAAGCTGGAGCCCCACCCCGTGATACCTCGGTAAGCAGCACATCAAGCTTTTCACTTTaGAGCCACACTCTGATTTTA +
Preference number: 4 (lower is better)
Translates to: ASTTQAGAPPRDTSVSSTSSFSL*SHTLIL
Trigger: TAAAATCAGAGTGTGGCTGCAAAGTGAAAAGCTTGA...TGTGCTGCTTACCGAGGTATCACGGGGTGGGGCTCCAGCTTGGGTCGTTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CCA 90 bp GCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAACTAGAAAGAACCTACCTGGGGTTCTaGGGCCGCCCTCACCCTTGC +
Preference number: 4 (lower is better)
Translates to: AAHLIWEINVFAQPQLERTYLGF*GRPHPC
Trigger: GCAAGGGTGAGGGCGGCCCCAGAACCCCAGGTAGGT...TCTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CCA 90 bp GGGAGAGCTTTAACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATATGGCATATTGGAGATaGCTAGGTGCCTTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: GRALTQSSSGLVSDPGVHMAYWR*LGALAL
Trigger: GAGAGCCAAGGCACCTAGCCATCTCCAATATGCCAT...ATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTTAAAGCTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CCA 90 bp GGGAGAGCTTTAACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATCAGTGGGTATCCTACTaGGTTCCTGCCAATGAGTGT +
Preference number: 4 (lower is better)
Translates to: GRALTQSSSGLVSDPGVHQWVSY*VPANEC
Trigger: ACACTCATTGGCAGGAACCCAGTAGGATACCCACTG...ATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTTAAAGCTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
3UTR CAA 72 bp CTGACCAACATCCAAAGGGCAAGAAAGCTTGATGACTaGGCCTTTACAAGTCAGCCCCTGGGCATGGAGCAA +
Preference number: 4 (lower is better)
Translates to: LTNIQRARKLDD*AFTSQPLGMEQ
Trigger: TTGCTCCATGCCCAGGGGCTGACTTGTAAAGGCCAAGTCATCAAGCTTTCTTGCCCTTTGGATGTTGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp GCTTTAACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAATGGTGCTGGTGGGCTaGCTGGCTGTGATTTCTACT +
Preference number: 4 (lower is better)
Translates to: ALTQSSSGLVSDPGVHCSMVLVG*LAVIST
Trigger: AGTAGAAATCACAGCCAGTCAGCCCACCAGCACCAT...TGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTTAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp CCACCCCGTGATACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTGGTGACTATGCAGGATaGTGGTGCTGGTGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: PPRDTSVSSTSYLGDKCFGDYAG*WCWWAD
Trigger: GTCAGCCCACCAGCACCATCATCCTGCATAGTCACC...AAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGTATCACGGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp GTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGACTATTCAGAGTCTTTCGAGAGTGCAATTTGCTCCTaGCGGGGGTGTTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: VSDPGVHCSVVDYSESFESAICS*RGCSRT
Trigger: GGTCCTGGAACACCCCCGTCAGGAGCAAATTGCACT...CTCGAAAGACTCTGAATAGTCGACTACTGAACAATGAACACCTGGATCTGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp AACTTTAGCGAAGTCAGCTATGCTTCCATTCCGTTTGATGTAGCATCAAAGCATTGGAGCCCCACCCCGTaGTACCTCGGTAAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: NFSEVSYASIPFDVASKHWSPTP*YLGKQH
Trigger: GTGCTGCTTACCGAGGTATCACGGGGTGGGGCTCCA...ATGCTTTGATGCTACATCAAACGGAATGGAAGCATAGCTGACTTCGCTAAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR GCA 90 bp GCTTTAACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCATCTGAAATAGCCTTCTaGCCTCTGTACGCACGGCTG +
Preference number: 4 (lower is better)
Translates to: ALTQSSSGLVSDPGVHCSSEIAF*PLYARL
Trigger: CAGCCGTGCGTACAGAGGGCAGAAGGCTATTTCAGA...TGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTTAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR GCA 90 bp CTCTCCGGCTCCCCACTGACCAACATCCAAAGGGCAAGAAAGCTTGATGACTTGTTTTTCCTCAGAAATTaGCAGGCCAGTGGGTATCCT +
Preference number: 4 (lower is better)
Translates to: LSGSPLTNIQRARKLDDLFFLRN*QASGYP
Trigger: AGGATACCCACTGGCCTGGCAATTTCTGAGGAAAAA...CAAGTCATCAAGCTTTCTTGCCCTTTGGATGTTGGTCAGTGGGGAGCCGGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CCA 90 bp AACTTTAGCGAAGTCAGCTATGCTTCCATTCCGTTTGATGTAGCATCAAAGCATCTTGCTCTACCTACCTaGGGTTCTGGGGCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: NFSEVSYASIPFDVASKHLALPT*GSGAAL
Trigger: GAGGGCGGCCCCAGAACCCCAGGTAGGTAGAGCAAG...ATGCTTTGATGCTACATCAAACGGAATGGAAGCATAGCTGACTTCGCTAAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CCA 90 bp GAGAGCTTTAACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGAAATTGCCAGGCCAGTaGGTATCCTACTGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: ESFNPVIVRLSLRSRCSLKLPGQ*VSYWVP
Trigger: AGGAACCCAGTAGGATACCCACTGGCCTGGCAATTT...CAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTTAAAGCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR CCA 90 bp GCTTCAACGACCCAAGCTGGAGCCCCACCCCGTGATACCTCGGTAAGCAGCACAGATGATTTAGCGAGATaGCAGAGATTAACTTTGAAA +
Preference number: 4 (lower is better)
Translates to: ASTTQAGAPPRDTSVSSTDDLAR*QRLTLK
Trigger: TTTCAAAGTTAATCTCTGCCATCTCGCTAAATCATC...TGTGCTGCTTACCGAGGTATCACGGGGTGGGGCTCCAGCTTGGGTCGTTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
3UTR CAA 72 bp TCTTCTGTGGCAGGGAACCCAACACTTGGGTTTACGTaGCAGGGCAACACCTGTGATGAACAAAACACATGG +
Preference number: 4 (lower is better)
Translates to: SSVAGNPTLGFT*QGNTCDEQNTW
Trigger: CCATGTGTTTTGTTCATCACAGGTGTTGCCCTGCAACGTAAACCCAAGTGTTGGGTTCCCTGCCACAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp ACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACATTCCCAAACCACTGGTaGGCCAGTTCATGGGCCACA +
Preference number: 4 (lower is better)
Translates to: TSVSSTSYLGDKCFCAATFPNHW*ASSWAT
Trigger: TGTGGCCCATGAACTGGCTCACCAGTGGTTTGGGAA...TGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CCA 90 bp GCTTTAACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAAGGGAACCCAACACTTaGGTTTACGTTGCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: ALTQSSSGLVSDPGVHCSREPNT*VYVAGQ
Trigger: TTGCCCTGCAACGTAAACCCAAGTGTTGGGTTCCCT...TGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTTAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR CCA 90 bp CATTGTTCAGTAGTCGACTATTCAGAGTCTTTCGAGGAGACTGATGAAACAGTTGTCAGCCCCTGGGCATaGAGCAAGGAAGAGGGATGG +
Preference number: 4 (lower is better)
Translates to: HCSVVDYSESFEETDETVVSPWA*SKEEGW
Trigger: CCATCCCTCTTCCTTGCTCCATGCCCAGGGGCTGAC...AACTGTTTCATCAGTCTCCTCGAAAGACTCTGAATAGTCGACTACTGAACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
3UTR CAA 72 bp AGGTACTTTATTCTTCTGTGGCAGGGAACCCAACACTaGGGTTTACGTTGCAGGGCAACACCTGTGATGAAC +
Preference number: 4 (lower is better)
Translates to: RYFILLWQGTQH*GLRCRATPVMN
Trigger: GTTCATCACAGGTGTTGCCCTGCAACGTAAACCCAAGTGTTGGGTTCCCTGCCACAGAAGAATAAAGTACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp ACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAGATGCTTCAGTGCTCTaGCACCATGAAGGAGTGGAC +
Preference number: 4 (lower is better)
Translates to: TSVSSTSYLGDKCFCAATDASVL*HHEGVD
Trigger: GTCCACTCCTTCATGGTGTCAGAGCACTGAAGCATC...TGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp AACTTTAGCGAAGTCAGCTATGCTTCCATTCCGTTTGATGTAGCATCAAAGCATAGTGCAATTTGCTCCTaGCGGGGGTGTTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: NFSEVSYASIPFDVASKHSAICS*RGCSRT
Trigger: GGTCCTGGAACACCCCCGTCAGGAGCAAATTGCACT...ATGCTTTGATGCTACATCAAACGGAATGGAAGCATAGCTGACTTCGCTAAAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp CCACCCCGTGATACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTTGCCAGCATAGTGAATaGCAACTGTGTACGGGAGCC +
Preference number: 4 (lower is better)
Translates to: PPRDTSVSSTSYLGDKCFCQHSE*QLCTGA
Trigger: GGCTCCCGTACACAGTTGTCATTCACTATGCTGGCA...AAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGTATCACGGGGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp ACAGACTTGAATGCACTCTGCTTTTTCAGAAGAGATACTGTACCAGTCAGGGAATTCCCAAACCACTGGTaGGCCAGTTCATGGGCCACA +
Preference number: 4 (lower is better)
Translates to: TDLNALCFFRRDTVPVREFPNHW*ASSWAT
Trigger: TGTGGCCCATGAACTGGCTCACCAGTGGTTTGGGAA...TTCCCTGACTGGTACAGTATCTCTTCTGAAAAAGCAGAGTGCATTCAAGTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp CCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGACCTCTTCTGGGAGGATaGGCACATCTGTTTTTGTTT +
Preference number: 4 (lower is better)
Translates to: PVIVRLSLRSRCSLFSSRPLLGG*AHLFLF
Trigger: AAACAAAAACAGATGTGCTCATCCTCCCAGAAGAGG...TCGACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp CGGGAGAGCTTTAACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCAGCGATAGCCCATTCATaGAAAACTAACAGCTATTCT +
Preference number: 4 (lower is better)
Translates to: RESFNPVIVRLSLRSRCSAIAHS*KTNSYS
Trigger: AGAATAGCTGTTAGTTTTTCATGAATGGGCTATCGC...TGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTTAAAGCTCTCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp CTCTCCGGCTCCCCACTGACCAACATCCAAAGGGCAAGAAAGCTTGATGACTTGGTTTTCCTACAGACTTaGATGCACTCTGCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: LSGSPLTNIQRARKLDDLVFLQT*MHSAFS
Trigger: TGAAAAAGCAGAGTGCATTCAAGTCTGTAGGAAAAC...CAAGTCATCAAGCTTTCTTGCCCTTTGGATGTTGGTCAGTGGGGAGCCGGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp CGGGAGAGCTTTAACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTAACTGACTTGACTTaGACTCCGTTGGTTTACCAT +
Preference number: 4 (lower is better)
Translates to: RESFNPVIVRLSLRSRCSLTDLT*TPLVYH
Trigger: ATGGTAAACCAACGGAGTTCAAGTCAAGTCAGTTAA...TGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTTAAAGCTCTCCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR GCA 90 bp AACTTTAGCGAAGTCAGCTATGCTTCCATTCCGTTTGATGTAGCATCAAAGCATGGGTGTTCCAGGACCTaGAGGGGTTCTTCCGATAGC +
Preference number: 4 (lower is better)
Translates to: NFSEVSYASIPFDVASKHGCSRT*RGSSDS
Trigger: GCTATCGGAAGAACCCCTGCAGGTCCTGGAACACCC...ATGCTTTGATGCTACATCAAACGGAATGGAAGCATAGCTGACTTCGCTAAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR GCA 90 bp AGGAGACTGATGAAACAGTTTATGAATGATAAACATGGGGTACAGGGTTTTGGACTCGGGAGCCAGCAGTaGAATTTGCTCCTGACGGGG +
Preference number: 4 (lower is better)
Translates to: RRLMKQFMNDKHGVQGFGLGSQQ*NLLLTG
Trigger: CCCCGTCAGGAGCAAATTGCACTGCTGGCTCCCGAG...TCCAAAACCCTGTACCCCATGTTTATCATTCATAAACTGTTTCATCAGTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR GCA 90 bp AGAGCTTTAACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTAGGGGAAAACCCTTCTaGAGTGTCCAAGTGTTCATC +
Preference number: 4 (lower is better)
Translates to: RALTQSSSGLVSDPGVHCRGKPF*SVQVFI
Trigger: GATGAACACTTGGACACTGCAGAAGGGTTTTCCCCT...ACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTTAAAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR GCA 90 bp AGAGCTTTAACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTAATGTCAATGGAACATaGCACAGGTACCCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: RALTQSSSGLVSDPGVHCNVNGT*HRYPVS
Trigger: GGACACTGGGTACCTGTGGCATGTTCCATTGACATT...ACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTTAAAGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR GCA 90 bp ACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACATCTGAAATAGCCTTCTaGCCTCTGTACGCACGGCTG +
Preference number: 4 (lower is better)
Translates to: TSVSSTSYLGDKCFCAATSEIAF*PLYARL
Trigger: CAGCCGTGCGTACAGAGGGCAGAAGGCTATTTCAGA...TGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR GCA 90 bp TCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGACTATTCAGAGCACTTGGGTTTACGTTaGAGGGCAACACCTGTGATG +
Preference number: 4 (lower is better)
Translates to: SGLVSDPGVHCSVVDYSEHLGLR*RATPVM
Trigger: CATCACAGGTGTTGCCCTGCAACGTAAACCCAAGTG...CTCTGAATAGTCGACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CCA 90 bp TACTTTATTCTTCTGTGGCAGGGAACCCAACACTTGGGTTTACGTTGCAGGGCAGACACCATGAAGGAGTaGACACAGTTAAGAGAGCCA +
Preference number: 4 (lower is better)
Translates to: YFILLWQGTQHLGLRCRADTMKE*TQLREP
Trigger: TGGCTCTCTTAACTGTGTCCACTCCTTCATGGTGTC...TGCCCTGCAACGTAAACCCAAGTGTTGGGTTCCCTGCCACAGAAGAATAAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CCA 90 bp TACTTTATTCTTCTGTGGCAGGGAACCCAACACTTGGGTTTACGTTGCAGGGCACCCATCACTACGTTTTaGAGATGCTTCAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: YFILLWQGTQHLGLRCRAPITTF*RCFSAL
Trigger: CAGAGCACTGAAGCATCTCCAAAACGTAGTGATGGG...TGCCCTGCAACGTAAACCCAAGTGTTGGGTTCCCTGCCACAGAAGAATAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CCA 90 bp TCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGACTATTCAGAGCAGTGGGTATCCTACTaGGTTCCTGCCAATGAGTGT +
Preference number: 4 (lower is better)
Translates to: SGLVSDPGVHCSVVDYSEQWVSY*VPANEC
Trigger: ACACTCATTGGCAGGAACCCAGTAGGATACCCACTG...CTCTGAATAGTCGACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR TCA 90 bp AGAGCTTTAACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTCATAATGAACTGGGATaGCGTACTCAGGAAGTCGTA +
Preference number: 4 (lower is better)
Translates to: RALTQSSSGLVSDPGVHCHNELG*RTQEVV
Trigger: TACGACTTCCTGAGTACGTCATCCCAGTTCATTATG...ACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTTAAAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp AGAGCTTTAACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTGACAGACTCAAAATCTaGAATGATGAAGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: RALTQSSSGLVSDPGVHCDRLKI*NDEGHQ
Trigger: CTGGTGGCCTTCATCATTTCAGATTTTGAGTCTGTC...ACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTTAAAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp ACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACATCCATAGCACCAGACTaGAAGTCGGGAATAGCAGCA +
Preference number: 4 (lower is better)
Translates to: TSVSSTSYLGDKCFCAATSIAPD*KSGIAA
Trigger: TGCTGCTATTCCCGACTTTCAGTCTGGTGCTATGGA...TGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp GTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGACTATTCAGAGTCTTTCGAGTCCATAGCACCAGACTaGAAGTCGGGAATAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VSDPGVHCSVVDYSESFESIAPD*KSGIAA
Trigger: TGCTGCTATTCCCGACTTTCAGTCTGGTGCTATGGA...CTCGAAAGACTCTGAATAGTCGACTACTGAACAATGAACACCTGGATCTGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp CCACCCCGTGATACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTAACATCTCCCGGATCTaGGCAGGATTTTCCACAGGT +
Preference number: 4 (lower is better)
Translates to: PPRDTSVSSTSYLGDKCFNISRI*AGFSTG
Trigger: ACCTGTGGAAAATCCTGCTCAGATCCGGGAGATGTT...AAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGTATCACGGGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp GTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGACTATTCAGAGTCTTTCGAGAACATCTCCCGGATCTaGGCAGGATTTTCCACAGGT +
Preference number: 4 (lower is better)
Translates to: VSDPGVHCSVVDYSESFENISRI*AGFSTG
Trigger: ACCTGTGGAAAATCCTGCTCAGATCCGGGAGATGTT...CTCGAAAGACTCTGAATAGTCGACTACTGAACAATGAACACCTGGATCTGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp CCAGGTGTTCATTGTTCAGTAGTCGACTATTCAGAGTCTTTCGAGGAGACTGATACATCCACCCCTTCCTaGTGCCAATGTGAGGATGAA +
Preference number: 4 (lower is better)
Translates to: PGVHCSVVDYSESFEETDTSTPS*CQCEDE
Trigger: TTCATCCTCACATTGGCATCAGGAAGGGGTGGATGT...ATCAGTCTCCTCGAAAGACTCTGAATAGTCGACTACTGAACAATGAACACCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp CTCTCCGGCTCCCCACTGACCAACATCCAAAGGGCAAGAAAGCTTGATGACTTGTCATCTAGTAGCCATTaGAGCTTTTCCTTATTTTGG +
Preference number: 4 (lower is better)
Translates to: LSGSPLTNIQRARKLDDLSSSSH*SFSLFW
Trigger: CCAAAATAAGGAAAAGCTTCAATGGCTACTAGATGA...CAAGTCATCAAGCTTTCTTGCCCTTTGGATGTTGGTCAGTGGGGAGCCGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR GCA 90 bp AGAGCTTTAACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTTTTTCCTCAGAAATTaGCAGGCCAGTGGGTATCCT +
Preference number: 4 (lower is better)
Translates to: RALTQSSSGLVSDPGVHCFFLRN*QASGYP
Trigger: AGGATACCCACTGGCCTGGCAATTTCTGAGGAAAAA...ACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTTAAAGCTCT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR GCA 90 bp GTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGACTATTCAGAGTCTTTCGAGCACTTGGGTTTACGTTaGAGGGCAACACGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: VSDPGVHCSVVDYSESFEHLGLR*RATRSS
Trigger: GCTTGAACGTGTTGCCCTGCAACGTAAACCCAAGTG...CTCGAAAGACTCTGAATAGTCGACTACTGAACAATGAACACCTGGATCTGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512852.1
CDS-3UTR CCA 90 bp GTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGACTATTCAGAGTCTTTCGAGTGGGGTACAGGGTTTTaGACACGGGTGCTTAAGCAT +
Preference number: 4 (lower is better)
Translates to: VSDPGVHCSVVDYSESFEWGTGF*TRVLKH
Trigger: ATGCTTAAGCACCCGTGTCCAAAACCCTGTACCCCA...CTCGAAAGACTCTGAATAGTCGACTACTGAACAATGAACACCTGGATCTGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR CCA 90 bp AGAGCTTTAACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTACCAAAATCCAGAGGTaGAGAAGGCTGTGTGGAAAA +
Preference number: 4 (lower is better)
Translates to: RALTQSSSGLVSDPGVHCTKIQR*RRLCGK
Trigger: TTTTCCACACAGCCTTCTCCACCTCTGGATTTTGGT...ACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTTAAAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
3UTR CAA 72 bp AGGGATTGCCCTAAACCAGATCCCCATCTCCTTTGGTaGAGAACAGTGCCTCATTTGCTAGATGGAGATGAA +
Preference number: 4 (lower is better)
Translates to: RDCPKPDPHLLW*RTVPHLLDGDE
Trigger: TTCATCTCCATCTAGCAAATGAGGCACTGTTCTCAACCAAAGGAGATGGGGATCTGGTTTAGGGCAATCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296754.7
3UTR CAA 72 bp GTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATaGTTCAGTAGTCGACTATTCAGAGTCTTTCGAGGA +
Preference number: 4 (lower is better)
Translates to: VIVRLSLRSRCS*FSSRLFRVFRG
Trigger: TCCTCGAAAGACTCTGAATAGTCGACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR TCA 90 bp GCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAACTAGAAAGAATGGTGCTGGTGGGCTaGCTGGCTGTGATTTCTACT +
Preference number: 4 (lower is better)
Translates to: AAHLIWEINVFAQPQLERMVLVG*LAVIST
Trigger: AGTAGAAATCACAGCCAGTCAGCCCACCAGCACCAT...TCTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp CATTGTTCAGTAGTCGACTATTCAGAGTCTTTCGAGGAGACTGATGAAACAGTTTGCCAGCATAGTGAATaGCAACTGTGTACGGGAGCC +
Preference number: 4 (lower is better)
Translates to: HCSVVDYSESFEETDETVCQHSE*QLCTGA
Trigger: GGCTCCCGTACACAGTTGTCATTCACTATGCTGGCA...AACTGTTTCATCAGTCTCCTCGAAAGACTCTGAATAGTCGACTACTGAACAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp ACAGACTTGAATGCACTCTGCTTTTTCAGAAGAGATACTGTACCAGTCAGGGAACCCGATCATTACTGCTaGCTGCTGTGTGTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: TDLNALCFFRRDTVPVREPDHYC*LLCVFL
Trigger: AAGGAACACACACAGCAGTCAGCAGTAATGATCGGG...TTCCCTGACTGGTACAGTATCTCTTCTGAAAAAGCAGAGTGCATTCAAGTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp TTACGTTGCAGGGCAACACCTGTGATGAACAAAACACATGGTAGCGATAGCCCACCAATGCTGACGAGCTaGAATGCATTGTTAATGAGA +
Preference number: 4 (lower is better)
Translates to: LRCRATPVMNKTHGSDSPPMLTS*NALLMR
Trigger: TCTCATTAACAATGCATTTCAGCTCGTCAGCATTGG...TGGGCTATCGCTACCATGTGTTTTGTTCATCACAGGTGTTGCCCTGCAACGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp GCTTTAACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCATGGACACAACGGAGCTaGGAACCATTTTCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: ALTQSSSGLVSDPGVHCSWTQRS*EPFSFK
Trigger: TTTGAAAGAAAATGGTTCTCAGCTCCGTTGTGTCCA...TGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTTAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR TCA 90 bp ACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAATTATTTACATGCTGTaGGGCAAGGCTGTGGGACCA +
Preference number: 4 (lower is better)
Translates to: TSVSSTSYLGDKCFCAATIIYML*GKAVGP
Trigger: TGGTCCCACAGCCTTGCCTCACAGCATGTAAATAAT...TGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR GCA 90 bp ACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACATTGGAGATGCTTCAGTaGTCTGACACCATGAAGGAG +
Preference number: 4 (lower is better)
Translates to: TSVSSTSYLGDKCFCAATLEMLQ*SDTMKE
Trigger: CTCCTTCATGGTGTCAGAGCACTGAAGCATCTCCAA...TGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR GCA 90 bp AACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTAAAGGCCATTCTAGCTaGAGTGGGTTCAAATTGTGT +
Preference number: 4 (lower is better)
Translates to: NPVIVRLSLRSRCSLFSSKGHSS*SGFKLC
Trigger: ACACAATTTGAACCCACTGCAGCTAGAATGGCCTTT...ACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR GCA 90 bp CCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGAAGCATCTACCTCCATTaGGTCAAAACATTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: PVIVRLSLRSRCSLFSSRSIYLH*VKTFAK
Trigger: TTTGGCAAATGTTTTGACGCAATGGAGGTAGATGCT...TCGACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR GCA 90 bp CGGGAGAGCTTTAACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCAAATACCACTTTTAAATaGGTCAGCACTAAGATACTC +
Preference number: 4 (lower is better)
Translates to: RESFNPVIVRLSLRSRCSNTTFK*VSTKIL
Trigger: GAGTATCTTAGTGCTGACGCATTTAAAAGTGGTATT...TGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTTAAAGCTCTCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR GCA 90 bp TCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGACTATTCGTCTGTCCATGTCTaGTTATCAATGAGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: SSSGLVSDPGVHCSVVDYSSVHV*LSMRSL
Trigger: AAGGGACCTCATTGATAAGCAGACATGGACAGACGA...ATAGTCGACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR GCA 90 bp CCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGATCCTACAGACTTGAATaGACTCTGCTTTTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: PVIVRLSLRSRCSLFSSRSYRLE*TLLFQK
Trigger: CTTCTGAAAAAGCAGAGTGCATTCAAGTCTGTAGGA...TCGACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CCA 90 bp CCACCCCGTGATACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTCCCATCACTACGTTTTaGAGATGCTTCAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PPRDTSVSSTSYLGDKCFPITTF*RCFSAL
Trigger: CAGAGCACTGAAGCATCTCCAAAACGTAGTGATGGG...AAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGTATCACGGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CCA 90 bp AGAGCTTTAACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTGAGATCATAATGAACTaGGATGACGTACTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RALTQSSSGLVSDPGVHCEIIMN*DDVLRK
Trigger: CTTCCTGAGTACGTCATCCCAGTTCATTATGATCTC...ACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTTAAAGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CCA 90 bp CCAGGTGTTCATTGTTCAGTAGTCGACTATTCAGAGTCTTTCGAGGAGACTGATCAGCAAGATCTTGTTTaGGTAGGGGATACGGTATGC +
Preference number: 4 (lower is better)
Translates to: PGVHCSVVDYSESFEETDQQDLV*VGDTVC
Trigger: GCATACCGTATCCCCTACCCAAACAAGATCTTGCTG...ATCAGTCTCCTCGAAAGACTCTGAATAGTCGACTACTGAACAATGAACACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CCA 90 bp AGAGCTTTAACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCCAAGTGTTCATCATaGTTTTCACATCCACCCCTT +
Preference number: 4 (lower is better)
Translates to: RALTQSSSGLVSDPGVHCSKCSS*FSHPPL
Trigger: AAGGGGTGGATGTGAAAACCATGATGAACACTTGGA...ACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTTAAAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CCA 90 bp CCACCCCGTGATACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTGGTGATGAATGTCAATaGAACATGCCACAGGTACCC +
Preference number: 4 (lower is better)
Translates to: PPRDTSVSSTSYLGDKCFGDECQ*NMPQVP
Trigger: GGGTACCTGTGGCATGTTCCATTGACATTCATCACC...AAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGTATCACGGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CCA 90 bp ACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAGTACCCATTACCATGTaGGCTATGGAAGATGAGCCA +
Preference number: 4 (lower is better)
Translates to: TSVSSTSYLGDKCFCAATVPITM*AMEDEP
Trigger: TGGCTCATCTTCCATAGCCCACATGGTAATGGGTAC...TGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp GCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAACTAGAAAGATGGGCTGACTGGCTGTaGTTTCTACTTTCGTGGTTC +
Preference number: 4 (lower is better)
Translates to: AAHLIWEINVFAQPQLERWADWL*FLLSWF
Trigger: GAACCACGAAAGTAGAAATCACAGCCAGTCAGCCCA...TCTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp AACTTTAGCGAAGTCAGCTATGCTTCCATTCCGTTTGATGTAGCATCAAAGCATGATATCTGCAGGTGGTaGCTATGCAGGATGATGGTG +
Preference number: 4 (lower is better)
Translates to: NFSEVSYASIPFDVASKHDICRW*LCRMMV
Trigger: CACCATCATCCTGCATAGTCACCACCTGCAGATATC...ATGCTTTGATGCTACATCAAACGGAATGGAAGCATAGCTGACTTCGCTAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp GCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAACTAGAAAGAGGGCCACAGTCATTGTaGTGCCAAGCTTACTTGATG +
Preference number: 4 (lower is better)
Translates to: AAHLIWEINVFAQPQLERGPQSL*CQAYLM
Trigger: CATCAAGTAAGCTTGGCATCACAATGACTGTGGCCC...TCTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp GCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAACTAGAAAGACCCGATCATTACTGCTaGCTGCTGTGTGTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: AAHLIWEINVFAQPQLERPDHYC*LLCVFL
Trigger: AAGGAACACACACAGCAGTCAGCAGTAATGATCGGG...TCTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp GTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGACTAAGGAAGGCCTTGAATTaGGTTTCCACTTCATTCATA +
Preference number: 4 (lower is better)
Translates to: VIVRLSLRSRCSLFSSRLRKALN*VSTSFI
Trigger: TATGAATGAAGTGGAAACTCAATTCAAGGCCTTCCT...TAGTCGACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp GCTTTAACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTTCTTGTGGAGAATTaGTTTGTTGTACCCATTACC +
Preference number: 4 (lower is better)
Translates to: ALTQSSSGLVSDPGVHCSVLVEN*FVVPIT
Trigger: GGTAATGGGTACAACAAATCAATTCTCCACAAGAAC...TGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTTAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR TCA 90 bp GCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAACTAGAAAGACCCATCTCCTTTGGTTaGGAACAGTGCCTCATTTGC +
Preference number: 4 (lower is better)
Translates to: AAHLIWEINVFAQPQLERPISFG*EQCLIC
Trigger: GCAAATGAGGCACTGTTCTCAACCAAAGGAGATGGG...TCTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp GCTTTAACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAAGTCAGGGAAATAGATaGCACTCACTCAGAATTATC +
Preference number: 4 (lower is better)
Translates to: ALTQSSSGLVSDPGVHCSSQGNR*HSLRII
Trigger: GATAATTCTGAGTGAGTGTCATCTATTTCCCTGACT...TGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTTAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp GTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGACTATCAAAAAGTTCAGTTTaGATTCTCCTTTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: VIVRLSLRSRCSLFSSRLSKSSV*ILLCQV
Trigger: CACCTGGCAAAGGAGAATTCAAACTGAACTTTTTGA...TAGTCGACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR GCA 90 bp ACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACATTGGAGATGGCTAGGTaGCTTGGCTCTCTTCTAATT +
Preference number: 4 (lower is better)
Translates to: TSVSSTSYLGDKCFCAATLEMAR*LGSLLI
Trigger: AATTAGAAGAGAGCCAAGGCACCTAGCCATCTCCAA...TGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR GCA 90 bp CCAGGTGTTCATTGTTCAGTAGTCGACTATTCAGAGTCTTTCGAGGAGACTGATTTGGAGATGGCTAGGTaGCTTGGCTCTCTTCTAATT +
Preference number: 4 (lower is better)
Translates to: PGVHCSVVDYSESFEETDLEMAR*LGSLLI
Trigger: AATTAGAAGAGAGCCAAGGCACCTAGCCATCTCCAA...ATCAGTCTCCTCGAAAGACTCTGAATAGTCGACTACTGAACAATGAACACCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR GCA 90 bp ACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACATGTAGGGCAAATACTTaGCATACTATCCCACAGGTC +
Preference number: 4 (lower is better)
Translates to: TSVSSTSYLGDKCFCAATCRANT*HTIPQV
Trigger: GACCTGTGGGATAGTATGGCAAGTATTTGCCCTACA...TGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CCA 90 bp CCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGATTTATTCCAAGGAAATaGTGTCCCATCACTACGTTT +
Preference number: 4 (lower is better)
Translates to: PVIVRLSLRSRCSLFSSRFIPRK*CPITTF
Trigger: AAACGTAGTGATGGGACACCATTTCCTTGGAATAAA...TCGACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CCA 90 bp CCACCCCGTGATACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTTCAGTTCCCCTTCCTTaGTTCTGTAGGTGCTTTTGT +
Preference number: 4 (lower is better)
Translates to: PPRDTSVSSTSYLGDKCFSVPLP*FCRCFC
Trigger: ACAAAAGCACCTACAGAACCAAGGAAGGGGAACTGA...AAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGTATCACGGGGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CCA 90 bp CCACCCCGTGATACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTACTTTCAGTTCAGGATaGGTCACACTGACAGACACA +
Preference number: 4 (lower is better)
Translates to: PPRDTSVSSTSYLGDKCFTFSSG*VTLTDT
Trigger: TGTGTCTGTCAGTGTGACCCATCCTGAACTGAAAGT...AAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGTATCACGGGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CCA 90 bp TTACGTTGCAGGGCAACACCTGTGATGAACAAAACACATGGTAGCGATAGCCCATTTAGCAAAAATCGATaGACCATGTCGGATTTGCTG +
Preference number: 4 (lower is better)
Translates to: LRCRATPVMNKTHGSDSPFSKNR*TMSDLL
Trigger: CAGCAAATCCGACATGGTCCATCGATTTTTGCTAAA...TGGGCTATCGCTACCATGTGTTTTGTTCATCACAGGTGTTGCCCTGCAACGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CCA 90 bp GCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAACTAGAAAGACCATTCCACCTCTTCTaGGAGGATGAGCACATCTGT +
Preference number: 4 (lower is better)
Translates to: AAHLIWEINVFAQPQLERPFHLF*EDEHIC
Trigger: ACAGATGTGCTCATCCTCCCAGAAGAGGTGGAATGG...TCTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CCA 90 bp AACTTTAGCGAAGTCAGCTATGCTTCCATTCCGTTTGATGTAGCATCAAAGCATAAATTGCCAGGCCAGTaGGTATCCTACTGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: NFSEVSYASIPFDVASKHKLPGQ*VSYWVP
Trigger: AGGAACCCAGTAGGATACCCACTGGCCTGGCAATTT...ATGCTTTGATGCTACATCAAACGGAATGGAAGCATAGCTGACTTCGCTAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CCA 90 bp ACAGACTTGAATGCACTCTGCTTTTTCAGAAGAGATACTGTACCAGTCAGGGAAGTACCCATTACCATGTaGGCTATGGAAGATGAGCCA +
Preference number: 4 (lower is better)
Translates to: TDLNALCFFRRDTVPVREVPITM*AMEDEP
Trigger: TGGCTCATCTTCCATAGCCCACATGGTAATGGGTAC...TTCCCTGACTGGTACAGTATCTCTTCTGAAAAAGCAGAGTGCATTCAAGTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CCA 90 bp GCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAACTAGAAAGACTGCCATCTCTGAAGTaGTTTCCCAAACCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: AAHLIWEINVFAQPQLERLPSLK*FPKPQL
Trigger: AAGCTGGGGTTTGGGAAACCACTTCAGAGATGGCAG...TCTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CCA 90 bp AAACAGTTTATGAATGATAAACATGGGGTACAGGGTTTTGGACACGGGTGCTTAAGGGAACCCAACACTTaGGTTTACGTTGCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: KQFMNDKHGVQGFGHGCLREPNT*VYVAGQ
Trigger: TTGCCCTGCAACGTAAACCCAAGTGTTGGGTTCCCT...TAAGCACCCGTGTCCAAAACCCTGTACCCCATGTTTATCATTCATAAACTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
3UTR CAA 72 bp GATCCCCATCTCCTTTGGTTGAGAACAGTGCCTCATTaGCTAGATGGAGATGAAGTAACTTTAGCGAAGTCA +
Preference number: 4 (lower is better)
Translates to: DPHLLWLRTVPH*LDGDEVTLAKS
Trigger: TGACTTCGCTAAAGTTACTTCATCTCCATCTAGCAAATGAGGCACTGTTCTCAACCAAAGGAGATGGGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp CCACCCCGTGATACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTCCAATGCTGACGAGCTaGAATGCATTGTTAATGAGA +
Preference number: 4 (lower is better)
Translates to: PPRDTSVSSTSYLGDKCFPMLTS*NALLMR
Trigger: TCTCATTAACAATGCATTTCAGCTCGTCAGCATTGG...AAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGTATCACGGGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp ACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACATGGACACAACGGAGCTaGGAACCATTTTCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: TSVSSTSYLGDKCFCAATWTQRS*EPFSFK
Trigger: TTTGAAAGAAAATGGTTCTCAGCTCCGTTGTGTCCA...TGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp AGACTGATGAAACAGTTTATGAATGATAAACATGGGGTACAGGGTTTTGGACACCTAATCCTGAAGGGATaGGGAGGGAGCAGTTACCAA +
Preference number: 4 (lower is better)
Translates to: RLMKQFMNDKHGVQGFGHLILKG*GGSSYQ
Trigger: TTGGTAACTGCTCCCTCCTCATCCCTTCAGGATTAG...GTGTCCAAAACCCTGTACCCCATGTTTATCATTCATAAACTGTTTCATCAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp TACTTTATTCTTCTGTGGCAGGGAACCCAACACTTGGGTTTACGTTGCAGGGCATCACTCAGAATTATCTaGGGAGGGTTCTATAAAAAG +
Preference number: 4 (lower is better)
Translates to: YFILLWQGTQHLGLRCRASLRII*GGFYKK
Trigger: CTTTTTATAGAACCCTCCTCAGATAATTCTGAGTGA...TGCCCTGCAACGTAAACCCAAGTGTTGGGTTCCCTGCCACAGAAGAATAAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR GCA 90 bp AAACAGTTTATGAATGATAAACATGGGGTACAGGGTTTTGGACACGGGTGCTTATTGGAGATGCTTCAGTaGTCTGACACCATGAAGGAG +
Preference number: 4 (lower is better)
Translates to: KQFMNDKHGVQGFGHGCLLEMLQ*SDTMKE
Trigger: CTCCTTCATGGTGTCAGAGCACTGAAGCATCTCCAA...TAAGCACCCGTGTCCAAAACCCTGTACCCCATGTTTATCATTCATAAACTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR GCA 90 bp CCACCCCGTGATACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTCCTTGGTTCTGTAGGTaGTTTTGTAAAATCCGTGGA +
Preference number: 4 (lower is better)
Translates to: PPRDTSVSSTSYLGDKCFPWFCR*FCKIRG
Trigger: TCCACGGATTTTACAAAAGCACCTACAGAACCAAGG...AAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGTATCACGGGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR GCA 90 bp CCAGGTGTTCATTGTTCAGTAGTCGACTATTCAGAGTCTTTCGAGGAGACTGATCCTTGGTTCTGTAGGTaGTTTTGTAAAATCCGTGGA +
Preference number: 4 (lower is better)
Translates to: PGVHCSVVDYSESFEETDPWFCR*FCKIRG
Trigger: TCCACGGATTTTACAAAAGCACCTACAGAACCAAGG...ATCAGTCTCCTCGAAAGACTCTGAATAGTCGACTACTGAACAATGAACACCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR GCA 90 bp GCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAACTAGAAAGAAGGGGAAAACCCTTCTaGAGTGTCCAAGTGTTCATC +
Preference number: 4 (lower is better)
Translates to: AAHLIWEINVFAQPQLERRGKPF*SVQVFI
Trigger: GATGAACACTTGGACACTGCAGAAGGGTTTTCCCCT...TCTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR GCA 90 bp GCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAACTAGAAAGAAATGTCAATGGAACATaGCACAGGTACCCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: AAHLIWEINVFAQPQLERNVNGT*HRYPVS
Trigger: GGACACTGGGTACCTGTGGCATGTTCCATTGACATT...TCTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR GCA 90 bp AACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCCTTATTTTGGGTTCTaGAGAGGGCAAATTCAATTT +
Preference number: 4 (lower is better)
Translates to: NPVIVRLSLRSRCSLFSSPYFGF*RGQIQF
Trigger: AAATTGAATTTGCCCTCTGCAGAACCCAAAATAAGG...ACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR GCA 90 bp GTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGACTAGGTTTTGGACACGGGTaGTTAAGCATAAACTATAAA +
Preference number: 4 (lower is better)
Translates to: VIVRLSLRSRCSLFSSRLGFGHG*LSINYK
Trigger: TTTATAGTTTATGCTTAAGCACCCGTGTCCAAAACC...TAGTCGACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR GCA 90 bp AACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTGGTTTTGGACACGGGTaGTTAAGCATAAACTATAAA +
Preference number: 4 (lower is better)
Translates to: NPVIVRLSLRSRCSLFSSGFGHG*LSINYK
Trigger: TTTATAGTTTATGCTTAAGCACCCGTGTCCAAAACC...ACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR CCA 90 bp CCACCCCGTGATACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTGAGATCATAATGAACTaGGATGACGTACTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PPRDTSVSSTSYLGDKCFEIIMN*DDVLRK
Trigger: CTTCCTGAGTACGTCATCCCAGTTCATTATGATCTC...AAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGTATCACGGGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CCA 90 bp CTCTGCTTTTTCAGAAGAGATACTGTACCAGTCAGGGAAATAGATGACACTCACTCAGTTCCCCTTCCTTaGTTCTGTAGGTGCTTTTGT +
Preference number: 4 (lower is better)
Translates to: LCFFRRDTVPVREIDDTHSVPLP*FCRCFC
Trigger: ACAAAAGCACCTACAGAACCAAGGAAGGGGAACTGA...GTGAGTGTCATCTATTTCCCTGACTGGTACAGTATCTCTTCTGAAAAAGCAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CCA 90 bp GTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGACTAACAGTGACATCAAAATaGTCTTCTATGAGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: VIVRLSLRSRCSLFSSRLTVTSK*SSMSPS
Trigger: TGAAGGACTCATAGAAGACCATTTTGATGTCACTGT...TAGTCGACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CCA 90 bp GTTCATTGTTCAGTAGTCGACTATTCAGAGTCTTTCGAGGAGACTGATGAAACAGGTGATGAATGTCAATaGAACATGCCACAGGTACCC +
Preference number: 4 (lower is better)
Translates to: VHCSVVDYSESFEETDETGDECQ*NMPQVP
Trigger: GGGTACCTGTGGCATGTTCCATTGACATTCATCACC...TGTTTCATCAGTCTCCTCGAAAGACTCTGAATAGTCGACTACTGAACAATGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CCA 90 bp AGACTGATGAAACAGTTTATGAATGATAAACATGGGGTACAGGGTTTTGGACACCCATTCCACCTCTTCTaGGAGGATGAGCACATCTGT +
Preference number: 4 (lower is better)
Translates to: RLMKQFMNDKHGVQGFGHPFHLF*EDEHIC
Trigger: ACAGATGTGCTCATCCTCCCAGAAGAGGTGGAATGG...GTGTCCAAAACCCTGTACCCCATGTTTATCATTCATAAACTGTTTCATCAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CCA 90 bp AGACTGATGAAACAGTTTATGAATGATAAACATGGGGTACAGGGTTTTGGACACAAATTGCCAGGCCAGTaGGTATCCTACTGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: RLMKQFMNDKHGVQGFGHKLPGQ*VSYWVP
Trigger: AGGAACCCAGTAGGATACCCACTGGCCTGGCAATTT...GTGTCCAAAACCCTGTACCCCATGTTTATCATTCATAAACTGTTTCATCAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR TCA 90 bp AACTTTAGCGAAGTCAGCTATGCTTCCATTCCGTTTGATGTAGCATCAAAGCATGACAGACTCAAAATCTaGAATGATGAAGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: NFSEVSYASIPFDVASKHDRLKI*NDEGHQ
Trigger: CTGGTGGCCTTCATCATTTCAGATTTTGAGTCTGTC...ATGCTTTGATGCTACATCAAACGGAATGGAAGCATAGCTGACTTCGCTAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp GCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAACTAGAAAGAGTGGGCTATGGAAGATaGGCCAAGTTCAAACTTTTG +
Preference number: 4 (lower is better)
Translates to: AAHLIWEINVFAQPQLERVGYGR*AKFKLL
Trigger: CAAAAGTTTGAACTTGGCTCATCTTCCATAGCCCAC...TCTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp GTTCATTGTTCAGTAGTCGACTATTCAGAGTCTTTCGAGGAGACTGATGAAACAGTGGGCTATGGAAGATaGGCCAAGTTCAAACTTTTG +
Preference number: 4 (lower is better)
Translates to: VHCSVVDYSESFEETDETVGYGR*AKFKLL
Trigger: CAAAAGTTTGAACTTGGCTCATCTTCCATAGCCCAC...TGTTTCATCAGTCTCCTCGAAAGACTCTGAATAGTCGACTACTGAACAATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR TCA 90 bp ACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAGTTCTTGTGGAGAATTaGTTTGTTGTACCCATTACC +
Preference number: 4 (lower is better)
Translates to: TSVSSTSYLGDKCFCAATVLVEN*FVVPIT
Trigger: GGTAATGGGTACAACAAATCAATTCTCCACAAGAAC...TGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp CCACCCCGTGATACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTTTTGCTAGATGGAGATaGAGTAACTTTAGCGAAGTC +
Preference number: 4 (lower is better)
Translates to: PPRDTSVSSTSYLGDKCFFARWR*SNFSEV
Trigger: GACTTCGCTAAAGTTACTTCATCTCCATCTAGCAAA...AAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGTATCACGGGGTGG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp ACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAATTCCTAGCAACATTTaGGAGGGCAGTTTAGCAAAA +
Preference number: 4 (lower is better)
Translates to: TSVSSTSYLGDKCFCAATIPSNI*EGSLAK
Trigger: TTTTGCTAAACTGCCCTCTCAAATGTTGCTAGGAAT...TGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR GCA 90 bp AACTTTAGCGAAGTCAGCTATGCTTCCATTCCGTTTGATGTAGCATCAAAGCATACTACGTTTTGGAGATaGTTCAGTGCTCTGACACCA +
Preference number: 4 (lower is better)
Translates to: NFSEVSYASIPFDVASKHTTFWR*FSALTP
Trigger: TGGTGTCAGAGCACTGAAGCATCTCCAAAACGTAGT...ATGCTTTGATGCTACATCAAACGGAATGGAAGCATAGCTGACTTCGCTAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR GCA 90 bp AAACAGTTTATGAATGATAAACATGGGGTACAGGGTTTTGGACACGGGTGCTTAACTACGTTTTGGAGATaGTTCAGTGCTCTGACACCA +
Preference number: 4 (lower is better)
Translates to: KQFMNDKHGVQGFGHGCLTTFWR*FSALTP
Trigger: TGGTGTCAGAGCACTGAAGCATCTCCAAAACGTAGT...TAAGCACCCGTGTCCAAAACCCTGTACCCCATGTTTATCATTCATAAACTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR GCA 90 bp CCACCCCGTGATACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTAGCATCTACCTCCATTaGGTCAAAACATTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: PPRDTSVSSTSYLGDKCFSIYLH*VKTFAK
Trigger: TTTGGCAAATGTTTTGACGCAATGGAGGTAGATGCT...AAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGTATCACGGGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR GCA 90 bp AAACAGTTTATGAATGATAAACATGGGGTACAGGGTTTTGGACACGGGTGCTTATGTAGGGCAAATACTTaGCATACTATCCCACAGGTC +
Preference number: 4 (lower is better)
Translates to: KQFMNDKHGVQGFGHGCLCRANT*HTIPQV
Trigger: GACCTGTGGGATAGTATGGCAAGTATTTGCCCTACA...TAAGCACCCGTGTCCAAAACCCTGTACCCCATGTTTATCATTCATAAACTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR GCA 90 bp GCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAACTAGAAAGAGCTGACGAGCTGAAATaGATTGTTAATGAGACTCGC +
Preference number: 4 (lower is better)
Translates to: AAHLIWEINVFAQPQLERADELK*IVNETR
Trigger: GCGAGTCTCATTAACAATGCATTTCAGCTCGTCAGC...TCTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR GCA 90 bp GCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAACTAGAAAGATTTTTCCTCAGAAATTaGCAGGCCAGTGGGTATCCT +
Preference number: 4 (lower is better)
Translates to: AAHLIWEINVFAQPQLERFFLRN*QASGYP
Trigger: AGGATACCCACTGGCCTGGCAATTTCTGAGGAAAAA...TCTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR GCA 90 bp GCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAACTAGAAAGAGGATTTTCATCCTGTTaGGTCAGCTTCAGGATCATG +
Preference number: 4 (lower is better)
Translates to: AAHLIWEINVFAQPQLERGFSSC*VSFRIM
Trigger: CATGATCCTGAAGCTGACGCAACAGGATGAAAATCC...TCTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR GCA 90 bp ACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAGGAGATAAATGTTTTTaGGCAGCCACAACTAGAAAG +
Preference number: 4 (lower is better)
Translates to: TSVSSTSYLGDKCFCAATGDKCF*AATTRK
Trigger: CTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCC...TGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR GCA 90 bp TCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGACTATGACTTGAATGCACTCTaGTTTTTCAGAAGAGATACT +
Preference number: 4 (lower is better)
Translates to: SSSGLVSDPGVHCSVVDYDLNAL*FFRRDT
Trigger: AGTATCTCTTCTGAAAAAGCAGAGTGCATTCAAGTC...ATAGTCGACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CCA 90 bp GTTCATTGTTCAGTAGTCGACTATTCAGAGTCTTTCGAGGAGACTGATGAAACAACTTTCAGTTCAGGATaGGTCACACTGACAGACACA +
Preference number: 4 (lower is better)
Translates to: VHCSVVDYSESFEETDETTFSSG*VTLTDT
Trigger: TGTGTCTGTCAGTGTGACCCATCCTGAACTGAAAGT...TGTTTCATCAGTCTCCTCGAAAGACTCTGAATAGTCGACTACTGAACAATGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp ACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACATCTTGGTTATCTTGCTaGCAGACTCAAAATCTGAAA +
Preference number: 4 (lower is better)
Translates to: TSVSSTSYLGDKCFCAATSWLSC*QTQNLK
Trigger: TTTCAGATTTTGAGTCTGTCAGCAAGATAACCAAGA...TGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp CCACCCCGTGATACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTGGGGATACGGTATGCTaGAATAATCCTCATAAAATT +
Preference number: 4 (lower is better)
Translates to: PPRDTSVSSTSYLGDKCFGDTVC*NNPHKI
Trigger: AATTTTATGAGGATTATTTCAGCATACCGTATCCCC...AAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGTATCACGGGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp AGACTGATGAAACAGTTTATGAATGATAAACATGGGGTACAGGGTTTTGGACACGTGGGCTATGGAAGATaGGCCAAGTTCAAACTTTTG +
Preference number: 4 (lower is better)
Translates to: RLMKQFMNDKHGVQGFGHVGYGR*AKFKLL
Trigger: CAAAAGTTTGAACTTGGCTCATCTTCCATAGCCCAC...GTGTCCAAAACCCTGTACCCCATGTTTATCATTCATAAACTGTTTCATCAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR TCA 90 bp GTTCATTGTTCAGTAGTCGACTATTCAGAGTCTTTCGAGGAGACTGATGAAACATGGACACAACGGAGCTaGGAACCATTTTCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: VHCSVVDYSESFEETDETWTQRS*EPFSFK
Trigger: TTTGAAAGAAAATGGTTCTCAGCTCCGTTGTGTCCA...TGTTTCATCAGTCTCCTCGAAAGACTCTGAATAGTCGACTACTGAACAATGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR CCA 90 bp ACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACATTTATTCCAAGGAAATaGTGTCCCATCACTACGTTT +
Preference number: 4 (lower is better)
Translates to: TSVSSTSYLGDKCFCAATFIPRK*CPITTF
Trigger: AAACGTAGTGATGGGACACCATTTCCTTGGAATAAA...TGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CCA 90 bp AACTTTAGCGAAGTCAGCTATGCTTCCATTCCGTTTGATGTAGCATCAAAGCATTCCAAGTGTTCATCATaGTTTTCACATCCACCCCTT +
Preference number: 4 (lower is better)
Translates to: NFSEVSYASIPFDVASKHSKCSS*FSHPPL
Trigger: AAGGGGTGGATGTGAAAACCATGATGAACACTTGGA...ATGCTTTGATGCTACATCAAACGGAATGGAAGCATAGCTGACTTCGCTAAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CCA 90 bp CATTGTTCAGTAGTCGACTATTCAGAGTCTTTCGAGGAGACTGATGAAACAGTTAAAAGTATCTCCAGTTaGAGCCAAAACAGCCATCTC +
Preference number: 4 (lower is better)
Translates to: HCSVVDYSESFEETDETVKSISS*SQNSHL
Trigger: GAGATGGCTGTTTTGGCTCCAACTGGAGATACTTTT...AACTGTTTCATCAGTCTCCTCGAAAGACTCTGAATAGTCGACTACTGAACAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp AACTTTAGCGAAGTCAGCTATGCTTCCATTCCGTTTGATGTAGCATCAAAGCATCATAAACAGAAACCTTaGCTCCACTCTTGGTTATCT +
Preference number: 4 (lower is better)
Translates to: NFSEVSYASIPFDVASKHHKQKP*LHSWLS
Trigger: AGATAACCAAGAGTGGAGTCAAGGTTTCTGTTTATG...ATGCTTTGATGCTACATCAAACGGAATGGAAGCATAGCTGACTTCGCTAAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp GCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAACTAGAAAGAAGCTCATTCAAACCTTaGAACACGGGCATAATTTCA +
Preference number: 4 (lower is better)
Translates to: AAHLIWEINVFAQPQLERSSFKP*NTGIIS
Trigger: TGAAATTATGCCCGTGTTTCAAGGTTTGAATGAGCT...TCTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp AACTTTAGCGAAGTCAGCTATGCTTCCATTCCGTTTGATGTAGCATCAAAGCATAGGAAGGCCTTGAATTaGGTTTCCACTTCATTCATA +
Preference number: 4 (lower is better)
Translates to: NFSEVSYASIPFDVASKHRKALN*VSTSFI
Trigger: TATGAATGAAGTGGAAACTCAATTCAAGGCCTTCCT...ATGCTTTGATGCTACATCAAACGGAATGGAAGCATAGCTGACTTCGCTAAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp AAACAGTTTATGAATGATAAACATGGGGTACAGGGTTTTGGACACGGGTGCTTAGTTCTTGTGGAGAATTaGTTTGTTGTACCCATTACC +
Preference number: 4 (lower is better)
Translates to: KQFMNDKHGVQGFGHGCLVLVEN*FVVPIT
Trigger: GGTAATGGGTACAACAAATCAATTCTCCACAAGAAC...TAAGCACCCGTGTCCAAAACCCTGTACCCCATGTTTATCATTCATAAACTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR TCA 90 bp AACTTTAGCGAAGTCAGCTATGCTTCCATTCCGTTTGATGTAGCATCAAAGCATTTTTCCAGACTTCCTTaGCTAATCACCTGTGCAATA +
Preference number: 4 (lower is better)
Translates to: NFSEVSYASIPFDVASKHFSRLP*LITCAI
Trigger: TATTGCACAGGTGATTAGTCAAGGAAGTCTGGAAAA...ATGCTTTGATGCTACATCAAACGGAATGGAAGCATAGCTGACTTCGCTAAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR GCA 90 bp CTCTGCTTTTTCAGAAGAGATACTGTACCAGTCAGGGAAATAGATGACACTCACTCAAGCTTTTCACTTTaGAGCCACACTCTGATTTTA +
Preference number: 4 (lower is better)
Translates to: LCFFRRDTVPVREIDDTHSSFSL*SHTLIL
Trigger: TAAAATCAGAGTGTGGCTGCAAAGTGAAAAGCTTGA...GTGAGTGTCATCTATTTCCCTGACTGGTACAGTATCTCTTCTGAAAAAGCAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR GCA 90 bp CTGATGAAACAGTTTATGAATGATAAACATGGGGTACAGGGTTTTGGACACGGGTCAAGCTTTTCACTTTaGAGCCACACTCTGATTTTA +
Preference number: 4 (lower is better)
Translates to: LMKQFMNDKHGVQGFGHGSSFSL*SHTLIL
Trigger: TAAAATCAGAGTGTGGCTGCAAAGTGAAAAGCTTGA...CCCGTGTCCAAAACCCTGTACCCCATGTTTATCATTCATAAACTGTTTCATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR GCA 90 bp GCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAACTAGAAAGAATGGGAAAACAGGCATaGTTATTCATTGCTTTTCGC +
Preference number: 4 (lower is better)
Translates to: AAHLIWEINVFAQPQLERMGKQA*LFIAFR
Trigger: GCGAAAAGCAATGAATAAGCATGCCTGTTTTCCCAT...TCTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp AGACTGATGAAACAGTTTATGAATGATAAACATGGGGTACAGGGTTTTGGACACCATAAACAGAAACCTTaGCTCCACTCTTGGTTATCT +
Preference number: 4 (lower is better)
Translates to: RLMKQFMNDKHGVQGFGHHKQKP*LHSWLS
Trigger: AGATAACCAAGAGTGGAGTCAAGGTTTCTGTTTATG...GTGTCCAAAACCCTGTACCCCATGTTTATCATTCATAAACTGTTTCATCAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR TCA 90 bp AACTTTAGCGAAGTCAGCTATGCTTCCATTCCGTTTGATGTAGCATCAAAGCATTCATCTAGTAGCCATTaGAGCTTTTCCTTATTTTGG +
Preference number: 4 (lower is better)
Translates to: NFSEVSYASIPFDVASKHSSSSH*SFSLFW
Trigger: CCAAAATAAGGAAAAGCTTCAATGGCTACTAGATGA...ATGCTTTGATGCTACATCAAACGGAATGGAAGCATAGCTGACTTCGCTAAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR GCA 90 bp GCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAACTAGAAAGACCTTATTTTGGGTTCTaGAGAGGGCAAATTCAATTT +
Preference number: 4 (lower is better)
Translates to: AAHLIWEINVFAQPQLERPYFGF*RGQIQF
Trigger: AAATTGAATTTGCCCTCTGCAGAACCCAAAATAAGG...TCTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CCA 90 bp GCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAACTAGAAAGAACAGTGACATCAAAATaGTCTTCTATGAGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: AAHLIWEINVFAQPQLERTVTSK*SSMSPS
Trigger: TGAAGGACTCATAGAAGACCATTTTGATGTCACTGT...TCTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR TCA 90 bp TCGAGGAGACTGATGAAACAGTTTATGAATGATAAACATGGGGTACAGGGTTTTTCTTGGTTATCTTGCTaGCAGACTCAAAATCTGAAA +
Preference number: 4 (lower is better)
Translates to: SRRLMKQFMNDKHGVQGFSWLSC*QTQNLK
Trigger: TTTCAGATTTTGAGTCTGTCAGCAAGATAACCAAGA...AAAACCCTGTACCCCATGTTTATCATTCATAAACTGTTTCATCAGTCTCCTCGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR GCA 90 bp GCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAACTAGAAAGAAATACCACTTTTAAATaGGTCAGCACTAAGATACTC +
Preference number: 4 (lower is better)
Translates to: AAHLIWEINVFAQPQLERNTTFK*VSTKIL
Trigger: GAGTATCTTAGTGCTGACGCATTTAAAAGTGGTATT...TCTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CAA 90 bp TCTGGAGGGGTGAGCCGGGAGAGCTTTAACCCAGTCATCGTCCGGCTTAGTCTCCAGGGAACCCAACACTaGGGTTTACGTTGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: SGGVSRESFNPVIVRLSLQGTQH*GLRCRA
Trigger: TGCCCTGCAACGTAAACCCAAGTGTTGGGTTCCCTG...GAGACTAAGCCGGACGATGACTGGGTTAAAGCTCTCCCGGCTCACCCCTCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS GCA 90 bp CTCCGCAGCATTCGCTCTGAGACTGAGCCCTCGTCTGTCCATGTCTaGTTATCAATGAGGTCCCTTAGCAGCCTGATGAGGAAGGCCTTG +
Preference number: 5 (lower is better)
Translates to: LRSIRSETEPSSVHV*LSMRSLSSLMRKAL
Trigger: CAAGGCCTTCCTCATCAGGCTGCTAAGGGACCTCATTGATAAGCAGACATGGACAGACGAGGGCTCAGTCTCAGAGCGAATGCTGCGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000514604.5
CDS-3UTR CAA 90 bp AGACCCTCAGGGGAGGCCAGCCCGAGGCATCCCGCAAGGGAATCAGGGAAGAACTGGAGAATTGATTTGTaGTACCCATTACCATGTGGG +
Preference number: 5 (lower is better)
Translates to: RPSGEASPRHPARESGKNWRIDL*YPLPCG
Trigger: CCCACATGGTAATGGGTACAACAAATCAATTCTCCA...GTTCTTCCCTGATTCCCTTGCGGGATGCCTCGGGCTGGCCTCCCCTGAGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CAA 90 bp AGACCCTCAGGGGAGGCCAGCCCGAGGCATCCCGCAAGGGAATCAGGGAAGAACATTGAGAAACTTGCTTaGAAGGCAGGTTCATCAAAG +
Preference number: 5 (lower is better)
Translates to: RPSGEASPRHPARESGKNIEKLA*KAGSSK
Trigger: CTTTGATGAACCTGCCTTCAAAGCAAGTTTCTCAAT...GTTCTTCCCTGATTCCCTTGCGGGATGCCTCGGGCTGGCCTCCCCTGAGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CAA 90 bp GCTTCAACGACCCAAGCTGGAGCCCCACCCCGTGATACCTCGGTAAGCAGCACATGGATTTTCATCCTGTaGCGTCAGCTTCAGGATCAT +
Preference number: 5 (lower is better)
Translates to: ASTTQAGAPPRDTSVSSTWIFIL*RQLQDH
Trigger: ATGATCCTGAAGCTGACGCAACAGGATGAAAATCCA...TGTGCTGCTTACCGAGGTATCACGGGGTGGGGCTCCAGCTTGGGTCGTTGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS TCA 90 bp TGTAAAATCCGTGGAAAGTCTCCGAAAGATTGCCAGCATAGTGAATaGCAACTGTGTACGGGAGCCCGACAAGGAGGGGCTCGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: CKIRGKSPKDCQHSE*QLCTGARQGGAREP
Trigger: TGGCTCCCGAGCCCCTCCTTGTCGGGCTCCCGTACACAGTTGTCATTCACTATGCTGGCAATCTTTCGGAGACTTTCCACGGATTTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000503921.5
ENST00000508227.5
CDS-3UTR CAA 90 bp GCTTCAACGACCCAAGCTGGAGCCCCACCCCGTGATACCTCGGTAAGCAGCACATGGAGAATTGATTTGTaGTACCCATTACCATGTGGG +
Preference number: 5 (lower is better)
Translates to: ASTTQAGAPPRDTSVSSTWRIDL*YPLPCG
Trigger: CCCACATGGTAATGGGTACAACAAATCAATTCTCCA...TGTGCTGCTTACCGAGGTATCACGGGGTGGGGCTCCAGCTTGGGTCGTTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CAA 90 bp AGACCCTCAGGGGAGGCCAGCCCGAGGCATCCCGCAAGGGAATCAGGGAAGAACTTGTGGAGAATTGATTaGTTGTACCCATTACCATGT +
Preference number: 5 (lower is better)
Translates to: RPSGEASPRHPARESGKNLWRID*LYPLPC
Trigger: ACATGGTAATGGGTACAACAAATCAATTCTCCACAA...GTTCTTCCCTGATTCCCTTGCGGGATGCCTCGGGCTGGCCTCCCCTGAGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CAA 90 bp GCTTCAACGACCCAAGCTGGAGCCCCACCCCGTGATACCTCGGTAAGCAGCACATGGGTTCAAATTGTGTaGATGCTAGTATCCTCAGTT +
Preference number: 5 (lower is better)
Translates to: ASTTQAGAPPRDTSVSSTWVQIV*MLVSSV
Trigger: AACTGAGGATACTAGCATCAACACAATTTGAACCCA...TGTGCTGCTTACCGAGGTATCACGGGGTGGGGCTCCAGCTTGGGTCGTTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CAA 90 bp GCTTCAACGACCCAAGCTGGAGCCCCACCCCGTGATACCTCGGTAAGCAGCACAATTGAGAAACTTGCTTaGAAGGCAGGTTCATCAAAG +
Preference number: 5 (lower is better)
Translates to: ASTTQAGAPPRDTSVSSTIEKLA*KAGSSK
Trigger: CTTTGATGAACCTGCCTTCAAAGCAAGTTTCTCAAT...TGTGCTGCTTACCGAGGTATCACGGGGTGGGGCTCCAGCTTGGGTCGTTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CAA 90 bp GGAATCAGGGAAGAACACCTCCACCTACTACCTCCTCCGACCCCAGCTCCAGCTCAGATTCTCTATATGTaGTCAGTCCCCAGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: GIREEHLHLLPPPTPAPAQILYM*SVPSFP
Trigger: TGGAAAACTGGGGACTGACAACATATAGAGAATCTG...AGCTGGAGCTGGGGTCGGAGGAGGTAGTAGGTGGAGGTGTTCTTCCCTGATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CAA 90 bp GCTTCAACGACCCAAGCTGGAGCCCCACCCCGTGATACCTCGGTAAGCAGCACAATGCCCACATTAAATTaGATCCATTCCACCTCTTCT +
Preference number: 5 (lower is better)
Translates to: ASTTQAGAPPRDTSVSSTMPTLN*IHSTSS
Trigger: AGAAGAGGTGGAATGGATCAAATTTAATGTGGGCAT...TGTGCTGCTTACCGAGGTATCACGGGGTGGGGCTCCAGCTTGGGTCGTTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CAA 90 bp TCTGGAGGGGTGAGCCGGGAGAGCTTTAACCCAGTCATCGTCCGGCTTAGTCTCCAGCTCATTCAAACCTaGAAACACGGGCATAATTTC +
Preference number: 5 (lower is better)
Translates to: SGGVSRESFNPVIVRLSLQLIQT*KHGHNF
Trigger: GAAATTATGCCCGTGTTTCAAGGTTTGAATGAGCTG...GAGACTAAGCCGGACGATGACTGGGTTAAAGCTCTCCCGGCTCACCCCTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CAA 90 bp GCTTCAACGACCCAAGCTGGAGCCCCACCCCGTGATACCTCGGTAAGCAGCACATTCAAGCTTTTCACTTaGCAGCCACACTCTGATTTT +
Preference number: 5 (lower is better)
Translates to: ASTTQAGAPPRDTSVSSTFKLFT*QPHSDF
Trigger: AAAATCAGAGTGTGGCTGCAAAGTGAAAAGCTTGAA...TGTGCTGCTTACCGAGGTATCACGGGGTGGGGCTCCAGCTTGGGTCGTTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS TCA 90 bp CGTCGACAGGCAGGCTCAAGTTTCCATTGGATTCCTTCCACTTTCTaGAATAGCCTTCTGCCCTCTGTACGCACGGCTGATAGTTGTGCA +
Preference number: 5 (lower is better)
Translates to: RRQAGSSFHWIPSTF*NSLLPSVRTADSCA
Trigger: TGCACAACTATCAGCCGTGCGTACAGAGGGCAGAAGGCTATTTCAGAAAGTGGAAGGAATCCAATGGAAACTTGAGCCTGCCTGTCGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000514604.5
CDS-3UTR CAA 90 bp AACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTGTTGCAAGGGACCATTaGAGGGGCAGAAACACCATC +
Preference number: 5 (lower is better)
Translates to: NPVIVRLSLRSRCSLFSSVARDH*RGRNTI
Trigger: GATGGTGTTTCTGCCCCTCAAATGGTCCCTTGCAAC...ACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CAA 90 bp TTGGCCTTTACAAGTCAGCCCCTGGGCATGGAGCAAGGAAGAGGGATGGGCAGCGCCAAGTTCAAACTTTaGTACAAGTTTGTTCCAGTT +
Preference number: 5 (lower is better)
Translates to: LAFTSQPLGMEQGRGMGSAKFKL*YKFVPV
Trigger: AACTGGAACAAACTTGTACAAAAGTTTGAACTTGGC...GCTGCCCATCCCTCTTCCTTGCTCCATGCCCAGGGGCTGACTTGTAAAGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CAA 90 bp TCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGACTATTCAGAGCAGGGAACCCAACACTaGGGTTTACGTTGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: SGLVSDPGVHCSVVDYSEQGTQH*GLRCRA
Trigger: TGCCCTGCAACGTAAACCCAAGTGTTGGGTTCCCTG...CTCTGAATAGTCGACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS TCA 90 bp CCAACAGTGAGGAAAGTAGAAATGACATGGTTGCAAGGGACCATTTaGGGGGCAGAAACACCATCTTCTTGCTCTACCTACCTGGGGTTC +
Preference number: 5 (lower is better)
Translates to: PTVRKVEMTWLQGTI*GAETPSSCSTYLGF
Trigger: GAACCCCAGGTAGGTAGAGCAAGAAGATGGTGTTTCTGCCCCTCAAATGGTCCCTTGCAACCATGTCATTTCTACTTTCCTCACTGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296754.7
ENST00000443439.7
CDS-3UTR CAA 90 bp GAGAGCTTTAACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGAGAAACACCATCTTCTaGCTCTACCTACCTGGGGTT +
Preference number: 5 (lower is better)
Translates to: ESFNPVIVRLSLRSRCSLRNTIF*LYLPGV
Trigger: AACCCCAGGTAGGTAGAGCAAGAAGATGGTGTTTCT...CAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTTAAAGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CAA 90 bp CGGGAGAGCTTTAACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCACTTCATGTAGTGCTCTaGCTTCATGTGTACATTCCT +
Preference number: 5 (lower is better)
Translates to: RESFNPVIVRLSLRSRCSLHVVL*LHVYIP
Trigger: AGGAATGTACACATGAAGCAAGAGCACTACATGAAG...TGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTTAAAGCTCTCCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS TCA 90 bp GGTTCCCAAACCACTGGTGAGCCAGTTCATGGGCCACAGTCATTGTaGTGCCAAGCTTACTTGATGCAGAAGACTTTTCTGCATCAAACA +
Preference number: 5 (lower is better)
Translates to: GSQTTGEPVHGPQSL*CQAYLMQKTFLHQT
Trigger: TGTTTGATGCAGAAAAGTCTTCTGCATCAAGTAAGCTTGGCATCACAATGACTGTGGCCCATGAACTGGCTCACCAGTGGTTTGGGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296754.7
ENST00000443439.7
CDS-3UTR CAA 90 bp TCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGACTATGCAGCAAGATCTTGTTaGGGTAGGGGATACGGTATG +
Preference number: 5 (lower is better)
Translates to: SSSGLVSDPGVHCSVVDYAARSC*GRGYGM
Trigger: CATACCGTATCCCCTACCCAAACAAGATCTTGCTGC...ATAGTCGACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CAA 90 bp GTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGACTAGGTTTCAATTGTCTGTaGGACACAACGGAGCTGAGA +
Preference number: 5 (lower is better)
Translates to: VIVRLSLRSRCSLFSSRLGFNCL*DTTELR
Trigger: TCTCAGCTCCGTTGTGTCCAACAGACAATTGAAACC...TAGTCGACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR CAA 90 bp TCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGACTATTCAGAGACACTTGGGTTTACGTaGCAGGGCAACACGTTCAAG +
Preference number: 5 (lower is better)
Translates to: SGLVSDPGVHCSVVDYSETLGFT*QGNTFK
Trigger: CTTGAACGTGTTGCCCTGCAACGTAAACCCAAGTGT...CTCTGAATAGTCGACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512852.1
CDS GCA 90 bp GATTTCTACTTTCGTGGTTCCCCAGAAGGTCAGCGTGGTAAGGTTTaGATGGATCAAGAGATCATAATGAACTGGGATGACGTACTCAGG +
Preference number: 5 (lower is better)
Translates to: DFYFRGSPEGQRGKV*MDQEIIMNWDDVLR
Trigger: CCTGAGTACGTCATCCCAGTTCATTATGATCTCTTGATCCATGCAAACCTTACCACGCTGACCTTCTGGGGAACCACGAAAGTAGAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000503921.5
ENST00000507154.1
ENST00000508227.5
CDS GCA 90 bp ATAAACCGCGACTTTGTGCAGCGTGTATTACCTGACGAGCTGAAATaGATTGTTAATGAGACTCGCCCGATCATTACTGCTGACTGCTGT +
Preference number: 5 (lower is better)
Translates to: INRDFVQRVLPDELK*IVNETRPIITADCC
Trigger: ACAGCAGTCAGCAGTAATGATCGGGCGAGTCTCATTAACAATGCATTTCAGCTCGTCAGGTAATACACGCTGCACAAAGTCGCGGTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507859.1
CDS CCA 90 bp GTTCCAGTTTTTCCTCAGAAATTGCCAGGCCAGTGGGTATCCTACTaGGTTCCTGCCAATGAGTGTAAGAATTTGTGGAAACTCCTGAGT +
Preference number: 5 (lower is better)
Translates to: VPVFPQKLPGQWVSY*VPANECKNLWKLLS
Trigger: ACTCAGGAGTTTCCACAAATTCTTACACTCATTGGCAGGAACCCAGTAGGATACCCACTGGCCTGGCAATTTCTGAGGAAAAACTGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000512852.1
CDS-3UTR CAA 90 bp AACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTTGGACCATGTCGGATTaGCTGGTGATGAATGTCAAT +
Preference number: 5 (lower is better)
Translates to: NPVIVRLSLRSRCSLFSSWTMSD*LVMNVN
Trigger: ATTGACATTCATCACCAGCAAATCCGACATGGTCCA...ACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CAA 90 bp CCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGAGAGGAAGGCCTTGAATaGAGTTTCCACTTCATTCAT +
Preference number: 5 (lower is better)
Translates to: PVIVRLSLRSRCSLFSSREEGLE*SFHFIH
Trigger: ATGAATGAAGTGGAAACTCAATTCAAGGCCTTCCTC...TCGACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CAA 90 bp CCACCCCGTGATACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTGTTTTTCCTCAGAAATaGCCAGGCCAGTGGGTATCC +
Preference number: 5 (lower is better)
Translates to: PPRDTSVSSTSYLGDKCFVFPQK*PGQWVS
Trigger: GGATACCCACTGGCCTGGCAATTTCTGAGGAAAAAC...AAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGTATCACGGGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CAA 90 bp CTCTCCGGCTCCCCACTGACCAACATCCAAAGGGCAAGAAAGCTTGATGACTTGTGTTCTTGTGGAGAATaGATTTGTTGTACCCATTAC +
Preference number: 5 (lower is better)
Translates to: LSGSPLTNIQRARKLDDLCSCGE*ICCTHY
Trigger: GTAATGGGTACAACAAATCAATTCTCCACAAGAACA...CAAGTCATCAAGCTTTCTTGCCCTTTGGATGTTGGTCAGTGGGGAGCCGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CAA 90 bp AGAAAGCTTGATGACTTGGCCTTTACAAGTCAGCCCCTGGGCATGGAGCAAGGAGGTTTCTGCACATTGTaGTGGCAATATTGTATCTGT +
Preference number: 5 (lower is better)
Translates to: RKLDDLAFTSQPLGMEQGGFCTL*WQYCIC
Trigger: ACAGATACAATATTGCCACAACAATGTGCAGAAACC...TCCTTGCTCCATGCCCAGGGGCTGACTTGTAAAGGCCAAGTCATCAAGCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS TCA 90 bp CCAACAGTGAGGAAAGTAGAAATGACATGGTTGCAAGGGACCATTTaGGGGGCAGAAACACCATCTTCTTGCTCTACCTGTAGTCCTAAT +
Preference number: 5 (lower is better)
Translates to: PTVRKVEMTWLQGTI*GAETPSSCSTCSPN
Trigger: ATTAGGACTACAGGTAGAGCAAGAAGATGGTGTTTCTGCCCCTCAAATGGTCCCTTGCAACCATGTCATTTCTACTTTCCTCACTGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507154.1
CDS CCA 90 bp CACTACGTTTTGGAGATGCTTCAGTGCTCTGACACCATGAAGGAGTaGACACAGTTAAGAGAGCCAACAGTGAGGAAAGTAGAAATGACA +
Preference number: 5 (lower is better)
Translates to: HYVLEMLQCSDTMKE*TQLREPTVRKVEMT
Trigger: TGTCATTTCTACTTTCCTCACTGTTGGCTCTCTTAACTGTGTCCACTCCTTCATGGTGTCAGAGCACTGAAGCATCTCCAAAACGTAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000507154.1
CDS-3UTR CAA 90 bp AACTTTAGCGAAGTCAGCTATGCTTCCATTCCGTTTGATGTAGCATCAAAGCATGTTGCAAGGGACCATTaGAGGGGCAGAAACACCATC +
Preference number: 5 (lower is better)
Translates to: NFSEVSYASIPFDVASKHVARDH*RGRNTI
Trigger: GATGGTGTTTCTGCCCCTCAAATGGTCCCTTGCAAC...ATGCTTTGATGCTACATCAAACGGAATGGAAGCATAGCTGACTTCGCTAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CAA 90 bp CCACCCCGTGATACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTTCCCATCACTACGTTTaGGAGATGCTTCAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: PPRDTSVSSTSYLGDKCFSHHYV*EMLQCS
Trigger: AGAGCACTGAAGCATCTCCAAAACGTAGTGATGGGA...AAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGTATCACGGGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CAA 90 bp CCACCCCGTGATACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTACCTTGACTCCACTCTaGGTTATCTTGCTGACAGAC +
Preference number: 5 (lower is better)
Translates to: PPRDTSVSSTSYLGDKCFTLTPL*VILLTD
Trigger: GTCTGTCAGCAAGATAACCAAGAGTGGAGTCAAGGT...AAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGTATCACGGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CAA 90 bp TCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGACTATAGGCTCAAGTTTCCATaGGATTCCTTCCACTTTCTG +
Preference number: 5 (lower is better)
Translates to: SSSGLVSDPGVHCSVVDYRLKFP*DSFHFL
Trigger: CAGAAAGTGGAAGGAATCCAATGGAAACTTGAGCCT...ATAGTCGACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CAA 90 bp TACTTTATTCTTCTGTGGCAGGGAACCCAACACTTGGGTTTACGTTGCAGGGCACTTCAATGGTTTCAATaGTCTGTTGGACACAACGGA +
Preference number: 5 (lower is better)
Translates to: YFILLWQGTQHLGLRCRALQWFQ*SVGHNG
Trigger: TCCGTTGTGTCCAACAGACAATTGAAACCATTGAAG...TGCCCTGCAACGTAAACCCAAGTGTTGGGTTCCCTGCCACAGAAGAATAAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CAA 90 bp AACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCTTCAATGGTTTCAATaGTCTGTTGGACACAACGGA +
Preference number: 5 (lower is better)
Translates to: NPVIVRLSLRSRCSLFSSLQWFQ*SVGHNG
Trigger: TCCGTTGTGTCCAACAGACAATTGAAACCATTGAAG...ACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR CAA 90 bp CCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGATTCAAGCTTTTCACTTaGCAGCCACACTCTGATTTT +
Preference number: 5 (lower is better)
Translates to: PVIVRLSLRSRCSLFSSRFKLFT*QPHSDF
Trigger: AAAATCAGAGTGTGGCTGCAAAGTGAAAAGCTTGAA...TCGACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR CAA 90 bp AGAGCTTTAACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTAGATCCAGGTGTTCATaGTTCAGTAGTCGACTATTC +
Preference number: 5 (lower is better)
Translates to: RALTQSSSGLVSDPGVHCRSRCS*FSSRLF
Trigger: GAATAGTCGACTACTGAACAATGAACACCTGGATCT...ACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTTAAAGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR CAA 90 bp GCTTTAACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAAGATCCAGGTGTTCATaGTTCAGTAGTCGACTATTC +
Preference number: 5 (lower is better)
Translates to: ALTQSSSGLVSDPGVHCSRSRCS*FSSRLF
Trigger: GAATAGTCGACTACTGAACAATGAACACCTGGATCT...TGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTTAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS TCA 90 bp AACCTTGACTCCACTCTTGGTTATCTTGCTGACAGACTCAAAATCTaGAATGATGAAGGCCACCAGATAGGTGCTCATCTTCACAGTGAC +
Preference number: 5 (lower is better)
Translates to: NLDSTLGYLADRLKI*NDEGHQIGAHLHSD
Trigger: GTCACTGTGAAGATGAGCACCTATCTGGTGGCCTTCATCATTTCAGATTTTGAGTCTGTCAGCAAGATAACCAAGAGTGGAGTCAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296754.7
ENST00000443439.7
CDS CCA 90 bp TTGTACAAGTTTGTTCCAGTTTTTCCTCAGAAATTGCCAGGCCAGTaGGTATCCTACTGGGTTCCTGCCAATGAGTGTAAGAATTTGTGG +
Preference number: 5 (lower is better)
Translates to: LYKFVPVFPQKLPGQ*VSYWVPANECKNLW
Trigger: CCACAAATTCTTACACTCATTGGCAGGAACCCAGTAGGATACCCACTGGCCTGGCAATTTCTGAGGAAAAACTGGAACAAACTTGTACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000512852.1
CDS-3UTR CAA 90 bp TTACGTTGCAGGGCAACACCTGTGATGAACAAAACACATGGTAGCGATAGCCCATGGGTTCAAATTGTGTaGATGCTAGTATCCTCAGTT +
Preference number: 5 (lower is better)
Translates to: LRCRATPVMNKTHGSDSPWVQIV*MLVSSV
Trigger: AACTGAGGATACTAGCATCAACACAATTTGAACCCA...TGGGCTATCGCTACCATGTGTTTTGTTCATCACAGGTGTTGCCCTGCAACGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CAA 90 bp ACAGACTTGAATGCACTCTGCTTTTTCAGAAGAGATACTGTACCAGTCAGGGAAACCTTGACTCCACTCTaGGTTATCTTGCTGACAGAC +
Preference number: 5 (lower is better)
Translates to: TDLNALCFFRRDTVPVRETLTPL*VILLTD
Trigger: GTCTGTCAGCAAGATAACCAAGAGTGGAGTCAAGGT...TTCCCTGACTGGTACAGTATCTCTTCTGAAAAAGCAGAGTGCATTCAAGTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CAA 90 bp GCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAACTAGAAAGAGCAGCAAGATCTTGTTaGGGTAGGGGATACGGTATG +
Preference number: 5 (lower is better)
Translates to: AAHLIWEINVFAQPQLERAARSC*GRGYGM
Trigger: CATACCGTATCCCCTACCCAAACAAGATCTTGCTGC...TCTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CAA 90 bp ACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAAGGCTCAAGTTTCCATaGGATTCCTTCCACTTTCTG +
Preference number: 5 (lower is better)
Translates to: TSVSSTSYLGDKCFCAATRLKFP*DSFHFL
Trigger: CAGAAAGTGGAAGGAATCCAATGGAAACTTGAGCCT...TGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CAA 90 bp AAACAGTTTATGAATGATAAACATGGGGTACAGGGTTTTGGACACGGGTGCTTAGTTTTTCCTCAGAAATaGCCAGGCCAGTGGGTATCC +
Preference number: 5 (lower is better)
Translates to: KQFMNDKHGVQGFGHGCLVFPQK*PGQWVS
Trigger: GGATACCCACTGGCCTGGCAATTTCTGAGGAAAAAC...TAAGCACCCGTGTCCAAAACCCTGTACCCCATGTTTATCATTCATAAACTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR CAA 90 bp CCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGATGTTCTTGTGGAGAATaGATTTGTTGTACCCATTAC +
Preference number: 5 (lower is better)
Translates to: PVIVRLSLRSRCSLFSSRCSCGE*ICCTHY
Trigger: GTAATGGGTACAACAAATCAATTCTCCACAAGAACA...TCGACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR CAA 90 bp TCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGACTATTCAGAGCTTCAAGCCGTGTTCTaGTGGAGAATTGATTTGTTG +
Preference number: 5 (lower is better)
Translates to: SGLVSDPGVHCSVVDYSELQAVF*WRIDLL
Trigger: CAACAAATCAATTCTCCACAAGAACACGGCTTGAAG...CTCTGAATAGTCGACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR CAA 90 bp GTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGACTATTCAAGCTTTTCACTTaGCAGCCACACTCTGATTTT +
Preference number: 5 (lower is better)
Translates to: VIVRLSLRSRCSLFSSRLFKLFT*QPHSDF
Trigger: AAAATCAGAGTGTGGCTGCAAAGTGAAAAGCTTGAA...TAGTCGACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR CAA 90 bp GCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAACTAGAAAGACCCCATCTCCTTTGGTaGAGAACAGTGCCTCATTTG +
Preference number: 5 (lower is better)
Translates to: AAHLIWEINVFAQPQLERPHLLW*RTVPHL
Trigger: CAAATGAGGCACTGTTCTCAACCAAAGGAGATGGGG...TCTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CAA 90 bp GAGAGCTTTAACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTAGGGGAACACATTTaGACATTTTTCGTACCAATC +
Preference number: 5 (lower is better)
Translates to: ESFNPVIVRLSLRSRCSLLGEHI*TFFVPI
Trigger: GATTGGTACGAAAAATGTCAAAATGTGTTCCCCTAA...CAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTTAAAGCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS TCA 90 bp CTGAAGAATCCTTTTACCTCTTCAAGCCGTGTTCTTGTGGAGAATTaGTTTGTTGTACCCATTACCATGTGGGCTATGGAAGATGAGCCA +
Preference number: 5 (lower is better)
Translates to: LKNPFTSSSRVLVEN*FVVPITMWAMEDEP
Trigger: TGGCTCATCTTCCATAGCCCACATGGTAATGGGTACAACAAATCAATTCTCCACAAGAACACGGCTTGAAGAGGTAAAAGGATTCTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000512852.1
CDS GCA 90 bp AGTTCAAACTTTTGTACAAGTTTGTTCCAGTTTTTCCTCAGAAATTaGCAGGCCAGTGGGTATCCTACTGGGTTCCTGCCAATGAGTGTA +
Preference number: 5 (lower is better)
Translates to: SSNFCTSLFQFFLRN*QASGYPTGFLPMSV
Trigger: TACACTCATTGGCAGGAACCCAGTAGGATACCCACTGGCCTGGCAATTTCTGAGGAAAAACTGGAACAAACTTGTACAAAAGTTTGAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000512852.1
CDS-3UTR CAA 90 bp AACTTTAGCGAAGTCAGCTATGCTTCCATTCCGTTTGATGTAGCATCAAAGCATAGAAACACCATCTTCTaGCTCTACCTACCTGGGGTT +
Preference number: 5 (lower is better)
Translates to: NFSEVSYASIPFDVASKHRNTIF*LYLPGV
Trigger: AACCCCAGGTAGGTAGAGCAAGAAGATGGTGTTTCT...ATGCTTTGATGCTACATCAAACGGAATGGAAGCATAGCTGACTTCGCTAAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CAA 90 bp ACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACACCACTCTTGGTTATCTaGCTGACAGACTCAAAATCT +
Preference number: 5 (lower is better)
Translates to: TSVSSTSYLGDKCFCAATPLLVI*LTDSKS
Trigger: AGATTTTGAGTCTGTCAGCAAGATAACCAAGAGTGG...TGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CAA 90 bp ACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAAAGCATCTACCTCCATaGCGTCAAAACATTTGCCAA +
Preference number: 5 (lower is better)
Translates to: TSVSSTSYLGDKCFCAATKHLPP*RQNICQ
Trigger: TTGGCAAATGTTTTGACGCAATGGAGGTAGATGCTT...TGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CAA 90 bp CCACCCCGTGATACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTCAGCTCATTCAAACCTaGAAACACGGGCATAATTTC +
Preference number: 5 (lower is better)
Translates to: PPRDTSVSSTSYLGDKCFQLIQT*KHGHNF
Trigger: GAAATTATGCCCGTGTTTCAAGGTTTGAATGAGCTG...AAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGTATCACGGGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CAA 90 bp AGAGCTTTAACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTTGTGGAGAATTGATTaGTTGTACCCATTACCATGT +
Preference number: 5 (lower is better)
Translates to: RALTQSSSGLVSDPGVHCLWRID*LYPLPC
Trigger: ACATGGTAATGGGTACAACAAATCAATTCTCCACAA...ACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTTAAAGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR CAA 90 bp GCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAACTAGAAAGAGGTTTCAATTGTCTGTaGGACACAACGGAGCTGAGA +
Preference number: 5 (lower is better)
Translates to: AAHLIWEINVFAQPQLERGFNCL*DTTELR
Trigger: TCTCAGCTCCGTTGTGTCCAACAGACAATTGAAACC...TCTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CAA 90 bp CCACCCCGTGATACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTCTTCAATGGTTTCAATaGTCTGTTGGACACAACGGA +
Preference number: 5 (lower is better)
Translates to: PPRDTSVSSTSYLGDKCFLQWFQ*SVGHNG
Trigger: TCCGTTGTGTCCAACAGACAATTGAAACCATTGAAG...AAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGTATCACGGGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CAA 90 bp AGACTGATGAAACAGTTTATGAATGATAAACATGGGGTACAGGGTTTTGGACACACACTTGGGTTTACGTaGCAGGGCAACACCTGTGAT +
Preference number: 5 (lower is better)
Translates to: RLMKQFMNDKHGVQGFGHTLGFT*QGNTCD
Trigger: ATCACAGGTGTTGCCCTGCAACGTAAACCCAAGTGT...GTGTCCAAAACCCTGTACCCCATGTTTATCATTCATAAACTGTTTCATCAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CAA 90 bp TCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGACTATAGAAGTCACTCTATTTaGTCGTGTATTAGGGGAACA +
Preference number: 5 (lower is better)
Translates to: SSSGLVSDPGVHCSVVDYRSHSI*SCIRGT
Trigger: TGTTCCCCTAATACACGACAAAATAGAGTGACTTCT...ATAGTCGACTACTGAACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CAA 90 bp AGAGCTTTAACCCAGTCATCGTCCGGCTTAGTCTCAGATCCAGGTGTTCATTGTAAAGGTTTCTGCACATaGTTGTGGCAATATTGTATC +
Preference number: 5 (lower is better)
Translates to: RALTQSSSGLVSDPGVHCKGFCT*LWQYCI
Trigger: GATACAATATTGCCACAACAATGTGCAGAAACCTTT...ACAATGAACACCTGGATCTGAGACTAAGCCGGACGATGACTGGGTTAAAGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CAA 90 bp GCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAACTAGAAAGATGGACCATGTCGGATTaGCTGGTGATGAATGTCAAT +
Preference number: 5 (lower is better)
Translates to: AAHLIWEINVFAQPQLERWTMSD*LVMNVN
Trigger: ATTGACATTCATCACCAGCAAATCCGACATGGTCCA...TCTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CAA 90 bp CTCTGCTTTTTCAGAAGAGATACTGTACCAGTCAGGGAAATAGATGACACTCACCTTCAAGCCGTGTTCTaGTGGAGAATTGATTTGTTG +
Preference number: 5 (lower is better)
Translates to: LCFFRRDTVPVREIDDTHLQAVF*WRIDLL
Trigger: CAACAAATCAATTCTCCACAAGAACACGGCTTGAAG...GTGAGTGTCATCTATTTCCCTGACTGGTACAGTATCTCTTCTGAAAAAGCAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CAA 90 bp GCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAACTAGAAAGATTGAAGATGCTAAACTaGCTGCTGCCATCTCTGAAG +
Preference number: 5 (lower is better)
Translates to: AAHLIWEINVFAQPQLERLKMLN*LLPSLK
Trigger: CTTCAGAGATGGCAGCAGCAAGTTTAGCATCTTCAA...TCTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CAA 90 bp AAACAGTTTATGAATGATAAACATGGGGTACAGGGTTTTGGACACGGGTGCTTACCACTCTTGGTTATCTaGCTGACAGACTCAAAATCT +
Preference number: 5 (lower is better)
Translates to: KQFMNDKHGVQGFGHGCLPLLVI*LTDSKS
Trigger: AGATTTTGAGTCTGTCAGCAAGATAACCAAGAGTGG...TAAGCACCCGTGTCCAAAACCCTGTACCCCATGTTTATCATTCATAAACTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CAA 90 bp AACTTTAGCGAAGTCAGCTATGCTTCCATTCCGTTTGATGTAGCATCAAAGCATCAGATTCTCTATATGTaGTCAGTCCCCAGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: NFSEVSYASIPFDVASKHQILYM*SVPSFP
Trigger: TGGAAAACTGGGGACTGACAACATATAGAGAATCTG...ATGCTTTGATGCTACATCAAACGGAATGGAAGCATAGCTGACTTCGCTAAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CAA 90 bp GCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAACTAGAAAGACTTCATGTAGTGCTCTaGCTTCATGTGTACATTCCT +
Preference number: 5 (lower is better)
Translates to: AAHLIWEINVFAQPQLERLHVVL*LHVYIP
Trigger: AGGAATGTACACATGAAGCAAGAGCACTACATGAAG...TCTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CAA 90 bp CTGATGAAACAGTTTATGAATGATAAACATGGGGTACAGGGTTTTGGACACGGGATGCCCACATTAAATTaGATCCATTCCACCTCTTCT +
Preference number: 5 (lower is better)
Translates to: LMKQFMNDKHGVQGFGHGMPTLN*IHSTSS
Trigger: AGAAGAGGTGGAATGGATCAAATTTAATGTGGGCAT...CCCGTGTCCAAAACCCTGTACCCCATGTTTATCATTCATAAACTGTTTCATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CAA 90 bp AACTTTAGCGAAGTCAGCTATGCTTCCATTCCGTTTGATGTAGCATCAAAGCATGAGGAAGGCCTTGAATaGAGTTTCCACTTCATTCAT +
Preference number: 5 (lower is better)
Translates to: NFSEVSYASIPFDVASKHEEGLE*SFHFIH
Trigger: ATGAATGAAGTGGAAACTCAATTCAAGGCCTTCCTC...ATGCTTTGATGCTACATCAAACGGAATGGAAGCATAGCTGACTTCGCTAAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CAA 90 bp GCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAACTAGAAAGAAAGCTTTTCCTTATTTaGGGTTCTGCAGAGGGCAAA +
Preference number: 5 (lower is better)
Translates to: AAHLIWEINVFAQPQLERKLFLI*GSAEGK
Trigger: TTTGCCCTCTGCAGAACCCAAAATAAGGAAAAGCTT...TCTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CAA 90 bp CATTGTTCAGTAGTCGACTATTCAGAGTCTTTCGAGGAGACTGATGAAACAGTTTGGAGAATTGATTTGTaGTACCCATTACCATGTGGG +
Preference number: 5 (lower is better)
Translates to: HCSVVDYSESFEETDETVWRIDL*YPLPCG
Trigger: CCCACATGGTAATGGGTACAACAAATCAATTCTCCA...AACTGTTTCATCAGTCTCCTCGAAAGACTCTGAATAGTCGACTACTGAACAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR CAA 90 bp ACCTCGGTAAGCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACATGTTCTTGTGGAGAATaGATTTGTTGTACCCATTAC +
Preference number: 5 (lower is better)
Translates to: TSVSSTSYLGDKCFCAATCSCGE*ICCTHY
Trigger: GTAATGGGTACAACAAATCAATTCTCCACAAGAACA...TGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGCTTACCGAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CAA 90 bp GCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAACTAGAAAGACTTCAAGCCGTGTTCTaGTGGAGAATTGATTTGTTG +
Preference number: 5 (lower is better)
Translates to: AAHLIWEINVFAQPQLERLQAVF*WRIDLL
Trigger: CAACAAATCAATTCTCCACAAGAACACGGCTTGAAG...TCTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CAA 90 bp GTCTCAGATCCAGGTGTTCATTGTTCAGTAGTCGACTATTCAGAGTCTTTCGAGTTCAAAAAGTTCAGTTaGAATTCTCCTTTGCCAGGT +
Preference number: 5 (lower is better)
Translates to: VSDPGVHCSVVDYSESFEFKKFS*NSPLPG
Trigger: ACCTGGCAAAGGAGAATTCAAACTGAACTTTTTGAA...CTCGAAAGACTCTGAATAGTCGACTACTGAACAATGAACACCTGGATCTGAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS CCA 90 bp CAGTGGGTATCCTACTGGGTTCCTGCCAATGAGTGTAAGAATTTGTaGAAACTCCTGAGTTTTTATTTTATCTCCCTTAAAGCTTTCATC +
Preference number: 5 (lower is better)
Translates to: QWVSYWVPANECKNL*KLLSFYFISLKAFI
Trigger: GATGAAAGCTTTAAGGGAGATAAAATAAAAACTCAGGAGTTTCCACAAATTCTTACACTCATTGGCAGGAACCCAGTAGGATACCCACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296754.7
ENST00000443439.7
CDS-3UTR CAA 90 bp AGACTGATGAAACAGTTTATGAATGATAAACATGGGGTACAGGGTTTTGGACACAAGCATCTACCTCCATaGCGTCAAAACATTTGCCAA +
Preference number: 5 (lower is better)
Translates to: RLMKQFMNDKHGVQGFGHKHLPP*RQNICQ
Trigger: TTGGCAAATGTTTTGACGCAATGGAGGTAGATGCTT...GTGTCCAAAACCCTGTACCCCATGTTTATCATTCATAAACTGTTTCATCAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS-3UTR CAA 90 bp TCGAGGAGACTGATGAAACAGTTTATGAATGATAAACATGGGGTACAGGGTTTTAAGCTTTTCCTTATTTaGGGTTCTGCAGAGGGCAAA +
Preference number: 5 (lower is better)
Translates to: SRRLMKQFMNDKHGVQGFKLFLI*GSAEGK
Trigger: TTTGCCCTCTGCAGAACCCAAAATAAGGAAAAGCTT...AAAACCCTGTACCCCATGTTTATCATTCATAAACTGTTTCATCAGTCTCCTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS CCA 90 bp TTCTTGTGGAGAATTGATTTGTTGTACCCATTACCATGTGGGCTATaGAAGATGAGCCAAGTTCAAACTTTTGTACAAGTTTGTTCCAGT +
Preference number: 5 (lower is better)
Translates to: FLWRIDLLYPLPCGL*KMSQVQTFVQVCSS
Trigger: ACTGGAACAAACTTGTACAAAAGTTTGAACTTGGCTCATCTTCCATAGCCCACATGGTAATGGGTACAACAAATCAATTCTCCACAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000512852.1
CDS-3UTR CAA 90 bp AACTTTAGCGAAGTCAGCTATGCTTCCATTCCGTTTGATGTAGCATCAAAGCATGCCAAGTTCAAACTTTaGTACAAGTTTGTTCCAGTT +
Preference number: 5 (lower is better)
Translates to: NFSEVSYASIPFDVASKHAKFKL*YKFVPV
Trigger: AACTGGAACAAACTTGTACAAAAGTTTGAACTTGGC...ATGCTTTGATGCTACATCAAACGGAATGGAAGCATAGCTGACTTCGCTAAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CAA 90 bp AACTTTAGCGAAGTCAGCTATGCTTCCATTCCGTTTGATGTAGCATCAAAGCATTTGTGGAGAATTGATTaGTTGTACCCATTACCATGT +
Preference number: 5 (lower is better)
Translates to: NFSEVSYASIPFDVASKHLWRID*LYPLPC
Trigger: ACATGGTAATGGGTACAACAAATCAATTCTCCACAA...ATGCTTTGATGCTACATCAAACGGAATGGAAGCATAGCTGACTTCGCTAAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CAA 90 bp GCAGCACATCTTATTTGGGAGATAAATGTTTTTGCGCAGCCACAACTAGAAAGAAGCAGCACATCTTATTaGGGAGATAAATGTTTTTGC +
Preference number: 5 (lower is better)
Translates to: AAHLIWEINVFAQPQLERSSTSY*GDKCFC
Trigger: GCAAAAACATTTATCTCCCAAATAAGATGTGCTGCT...TCTTTCTAGTTGTGGCTGCGCAAAAACATTTATCTCCCAAATAAGATGTGCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296754.7
CDS-3UTR CAA 90 bp AGGAGACTGATGAAACAGTTTATGAATGATAAACATGGGGTACAGGGTTTTGGAGCCAAGTTCAAACTTTaGTACAAGTTTGTTCCAGTT +
Preference number: 5 (lower is better)
Translates to: RRLMKQFMNDKHGVQGFGAKFKL*YKFVPV
Trigger: AACTGGAACAAACTTGTACAAAAGTTTGAACTTGGC...TCCAAAACCCTGTACCCCATGTTTATCATTCATAAACTGTTTCATCAGTCTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443439.7
ENST00000512852.1
CDS-3UTR CAA 90 bp AGACTGATGAAACAGTTTATGAATGATAAACATGGGGTACAGGGTTTTGGACACACACTCAACAAAATGTaGGTGATTAGAGATAACAGG +
Preference number: 5 (lower is better)
Translates to: RLMKQFMNDKHGVQGFGHTLNKM*VIRDNR
Trigger: CCTGTTATCTCTAATCACCAACATTTTGTTGAGTGT...GTGTCCAAAACCCTGTACCCCATGTTTATCATTCATAAACTGTTTCATCAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443439.7
CDS TCA 90 bp CTTTTCTCCATTAACTTATACATAGGAATCAGCTCATTCAAACCTTaGAACACGGGCATAATTTCAGTTTCATGTTTCAAGTACAGGGAT +
Preference number: 5 (lower is better)
Translates to: LFSINLYIGISSFKP*NTGIISVSCFKYRD
Trigger: ATCCCTGTACTTGAAACATGAAACTGAAATTATGCCCGTGTTTCAAGGTTTGAATGAGCTGATTCCTATGTATAAGTTAATGGAGAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000514604.5
CDS CAA 72 bp GTCCGGGGCGCCGTCAGAGCCCTTCATGTAGTGCTCTaGCTTCATGTGTACATTCCTCCCCCTCACTGTGAT +
Preference number: 6 (lower is better)
Translates to: VRGAVRALHVVL*LHVYIPPPHCD
Trigger: ATCACAGTGAGGGGGAGGAATGTACACATGAAGCAAGAGCACTACATGAAGGGCTCTGACGGCGCCCCGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000507859.1
CDS CCA 72 bp ATGGACCATGTCGGATTTGCTGGTGATGAATGTCAATaGAACATGCCACAGGTACCCAGTGTCCGGGGCGCC +
Preference number: 6 (lower is better)
Translates to: MDHVGFAGDECQ*NMPQVPSVRGA
Trigger: GGCGCCCCGGACACTGGGTACCTGTGGCATGTTCCATTGACATTCATCACCAGCAAATCCGACATGGTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000507859.1
CDS TCA 72 bp CGTGGAAAGTCTCCGAAAGATTGCCAGCATAGTGAATaGCAACTGTGTACGGGAGCCCGACAAGGAGGGGCT +
Preference number: 6 (lower is better)
Translates to: RGKSPKDCQHSE*QLCTGARQGGA
Trigger: AGCCCCTCCTTGTCGGGCTCCCGTACACAGTTGTCATTCACTATGCTGGCAATCTTTCGGAGACTTTCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000503921.5
ENST00000508227.5
CDS GCA 72 bp ATTCGCTCTGAGACTGAGCCCTCGTCTGTCCATGTCTaGTTATCAATGAGGTCCCTTAGCAGCCTGATGAGG +
Preference number: 6 (lower is better)
Translates to: IRSETEPSSVHV*LSMRSLSSLMR
Trigger: CCTCATCAGGCTGCTAAGGGACCTCATTGATAAGCAGACATGGACAGACGAGGGCTCAGTCTCAGAGCGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000514604.5
CDS CAA 72 bp TCTTCTGTGGCAGGGAACCCAACACTTGGGTTTACGTaGCAGGGCAACACGTTCAAGCTTTTCACTTTGCAG +
Preference number: 6 (lower is better)
Translates to: SSVAGNPTLGFT*QGNTFKLFTLQ
Trigger: CTGCAAAGTGAAAAGCTTGAACGTGTTGCCCTGCAACGTAAACCCAAGTGTTGGGTTCCCTGCCACAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512852.1
CDS CAA 90 bp GCCAACAGTGAGGAAAGTAGAAATGACATGGTTGCAAGGGACCATTaGAGGGGCAGAAACACCATCTTCTTGCTCTACCTACCTGGGGTT +
Preference number: 6 (lower is better)
Translates to: ANSEESRNDMVARDH*RGRNTIFLLYLPGV
Trigger: AACCCCAGGTAGGTAGAGCAAGAAGATGGTGTTTCTGCCCCTCAAATGGTCCCTTGCAACCATGTCATTTCTACTTTCCTCACTGTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296754.7
ENST00000443439.7
CDS TCA 72 bp ACCACTGGTGAGCCAGTTCATGGGCCACAGTCATTGTaGTGCCAAGCTTACTTGATGCAGAAGACTTTTCTG +
Preference number: 6 (lower is better)
Translates to: TTGEPVHGPQSL*CQAYLMQKTFL
Trigger: CAGAAAAGTCTTCTGCATCAAGTAAGCTTGGCATCACAATGACTGTGGCCCATGAACTGGCTCACCAGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296754.7
ENST00000443439.7
CDS GCA 72 bp TTTCGTGGTTCCCCAGAAGGTCAGCGTGGTAAGGTTTaGATGGATCAAGAGATCATAATGAACTGGGATGAC +
Preference number: 6 (lower is better)
Translates to: FRGSPEGQRGKV*MDQEIIMNWDD
Trigger: GTCATCCCAGTTCATTATGATCTCTTGATCCATGCAAACCTTACCACGCTGACCTTCTGGGGAACCACGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000503921.5
ENST00000507154.1
ENST00000508227.5
CDS CCA 72 bp TTGGAGATGCTTCAGTGCTCTGACACCATGAAGGAGTaGACACAGTTAAGAGAGCCAACAGTGAGGAAAGTA +
Preference number: 6 (lower is better)
Translates to: LEMLQCSDTMKE*TQLREPTVRKV
Trigger: TACTTTCCTCACTGTTGGCTCTCTTAACTGTGTCCACTCCTTCATGGTGTCAGAGCACTGAAGCATCTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000507154.1
CDS CCA 72 bp TTTGTTCCAGTTTTTCCTCAGAAATTGCCAGGCCAGTaGGTATCCTACTGGGTTCCTGCCAATGAGTGTAAG +
Preference number: 6 (lower is better)
Translates to: FVPVFPQKLPGQ*VSYWVPANECK
Trigger: CTTACACTCATTGGCAGGAACCCAGTAGGATACCCACTGGCCTGGCAATTTCTGAGGAAAAACTGGAACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000512852.1
CDS CCA 72 bp ATGGACCATGTCGGATTTGCTGGTGATGAATGTCAATaGAACATGCCACAGGTACCAAAACTGCTACAGCCA +
Preference number: 6 (lower is better)
Translates to: MDHVGFAGDECQ*NMPQVPKLLQP
Trigger: TGGCTGTAGCAGTTTTGGTACCTGTGGCATGTTCCATTGACATTCATCACCAGCAAATCCGACATGGTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514604.5
CDS CCA 72 bp GGTACTTTATTCTTCTGTGGCAGGGAACCCAACACTTaGGTTTACGTTGCAGGGCAACACGTTCAAGCTTTT +
Preference number: 6 (lower is better)
Translates to: GTLFFCGREPNT*VYVAGQHVQAF
Trigger: AAAAGCTTGAACGTGTTGCCCTGCAACGTAAACCCAAGTGTTGGGTTCCCTGCCACAGAAGAATAAAGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512852.1
CDS CAA 72 bp GAGGAAAGTAGAAATGACATGGTTGCAAGGGACCATTaGAGGGGCAGAAACACCATCTTCTTGCTCTACCTG +
Preference number: 6 (lower is better)
Translates to: EESRNDMVARDH*RGRNTIFLLYL
Trigger: CAGGTAGAGCAAGAAGATGGTGTTTCTGCCCCTCAAATGGTCCCTTGCAACCATGTCATTTCTACTTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507154.1
CDS CAA 72 bp AGGTACTTTATTCTTCTGTGGCAGGGAACCCAACACTaGGGTTTACGTTGCAGGGCAACACGTTCAAGCTTT +
Preference number: 6 (lower is better)
Translates to: RYFILLWQGTQH*GLRCRATRSSF
Trigger: AAAGCTTGAACGTGTTGCCCTGCAACGTAAACCCAAGTGTTGGGTTCCCTGCCACAGAAGAATAAAGTACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512852.1
CDS CAA 90 bp GAAGTCGTATTTTATTCCAAGGAAATGGTGTCCCATCACTACGTTTaGGAGATGCTTCAGTGCTCTGACACCATGAAGGAGTGGACACAG +
Preference number: 6 (lower is better)
Translates to: EVVFYSKEMVSHHYV*EMLQCSDTMKEWTQ
Trigger: CTGTGTCCACTCCTTCATGGTGTCAGAGCACTGAAGCATCTCCAAAACGTAGTGATGGGACACCATTTCCTTGGAATAAAATACGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000507154.1
CDS GCA 72 bp TTTTGTACAAGTTTGTTCCAGTTTTTCCTCAGAAATTaGCAGGCCAGTGGGTATCCTACTGGGTTCCTGCCA +
Preference number: 6 (lower is better)
Translates to: FCTSLFQFFLRN*QASGYPTGFLP
Trigger: TGGCAGGAACCCAGTAGGATACCCACTGGCCTGGCAATTTCTGAGGAAAAACTGGAACAAACTTGTACAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000512852.1
CDS GCA 72 bp GACTTTGTGCAGCGTGTATTACCTGACGAGCTGAAATaGATTGTTAATGAGACTCGCCCGATCATTACTGCT +
Preference number: 6 (lower is better)
Translates to: DFVQRVLPDELK*IVNETRPIITA
Trigger: AGCAGTAATGATCGGGCGAGTCTCATTAACAATGCATTTCAGCTCGTCAGGTAATACACGCTGCACAAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507859.1
CDS CCA 72 bp TTTCCTCAGAAATTGCCAGGCCAGTGGGTATCCTACTaGGTTCCTGCCAATGAGTGTAAGAATTTGTGGAAA +
Preference number: 6 (lower is better)
Translates to: FPQKLPGQWVSY*VPANECKNLWK
Trigger: TTTCCACAAATTCTTACACTCATTGGCAGGAACCCAGTAGGATACCCACTGGCCTGGCAATTTCTGAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000512852.1
CDS CAA 72 bp GAGGAAAGTAGAAATGACATGGTTGCAAGGGACCATTaGAGGGGCAGAAACACCATCTTCTTGCTCTACCTA +
Preference number: 6 (lower is better)
Translates to: EESRNDMVARDH*RGRNTIFLLYL
Trigger: TAGGTAGAGCAAGAAGATGGTGTTTCTGCCCCTCAAATGGTCCCTTGCAACCATGTCATTTCTACTTTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296754.7
ENST00000443439.7
CDS CAA 72 bp CCTCTTCAAGCCGTGTTCTTGTGGAGAATTGATTTGTaGTACCCATTACCATGTGGGCTATGGAAGATGAGC +
Preference number: 6 (lower is better)
Translates to: PLQAVFLWRIDL*YPLPCGLWKMS
Trigger: GCTCATCTTCCATAGCCCACATGGTAATGGGTACAACAAATCAATTCTCCACAAGAACACGGCTTGAAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000512852.1
CDS CAA 90 bp AGAAGAATAAGGTACTTTATTCTTCTGTGGCAGGGAACCCAACACTaGGGTTTACGTTGCAGGGCAACACGTTCAAGCTTTTCACTTTGC +
Preference number: 6 (lower is better)
Translates to: RRIRYFILLWQGTQH*GLRCRATRSSFSLC
Trigger: GCAAAGTGAAAAGCTTGAACGTGTTGCCCTGCAACGTAAACCCAAGTGTTGGGTTCCCTGCCACAGAAGAATAAAGTACCTTATTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512852.1
CDS CAA 72 bp TTTTATTCCAAGGAAATGGTGTCCCATCACTACGTTTaGGAGATGCTTCAGTGCTCTGACACCATGAAGGAG +
Preference number: 6 (lower is better)
Translates to: FYSKEMVSHHYV*EMLQCSDTMKE
Trigger: CTCCTTCATGGTGTCAGAGCACTGAAGCATCTCCAAAACGTAGTGATGGGACACCATTTCCTTGGAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000507154.1
CDS CAA 90 bp AAGTTCAAACTTTTGTACAAGTTTGTTCCAGTTTTTCCTCAGAAATaGCCAGGCCAGTGGGTATCCTACTGGGTTCCTGCCAATGAGTGT +
Preference number: 6 (lower is better)
Translates to: KFKLLYKFVPVFPQK*PGQWVSYWVPANEC
Trigger: ACACTCATTGGCAGGAACCCAGTAGGATACCCACTGGCCTGGCAATTTCTGAGGAAAAACTGGAACAAACTTGTACAAAAGTTTGAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000512852.1
CDS TCA 72 bp TCCACTCTTGGTTATCTTGCTGACAGACTCAAAATCTaGAATGATGAAGGCCACCAGATAGGTGCTCATCTT +
Preference number: 6 (lower is better)
Translates to: STLGYLADRLKI*NDEGHQIGAHL
Trigger: AAGATGAGCACCTATCTGGTGGCCTTCATCATTTCAGATTTTGAGTCTGTCAGCAAGATAACCAAGAGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296754.7
ENST00000443439.7
CDS CAA 72 bp TTGGAGATGGCTAGGTGCCTTGGCTCTCTTCTAATTTaGATTGAGAAACTTGCTTTGAAGGCAGGTTCATCA +
Preference number: 6 (lower is better)
Translates to: LEMARCLGSLLI*IEKLALKAGSS
Trigger: TGATGAACCTGCCTTCAAAGCAAGTTTCTCAATCAAAATTAGAAGAGAGCCAAGGCACCTAGCCATCTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296754.7
ENST00000443439.7
CDS CAA 72 bp TTACCTCTTCAAGCCGTGTTCTTGTGGAGAATTGATTaGTTGTACCCATTACCATGTGGGCTATGGAAGATG +
Preference number: 6 (lower is better)
Translates to: LPLQAVFLWRID*LYPLPCGLWKM
Trigger: CATCTTCCATAGCCCACATGGTAATGGGTACAACAAATCAATTCTCCACAAGAACACGGCTTGAAGAGGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000512852.1
CDS CAA 72 bp TCCTTTTACCTCTTCAAGCCGTGTTCTTGTGGAGAATaGATTTGTTGTACCCATTACCATGTGGGCTATGGA +
Preference number: 6 (lower is better)
Translates to: SFYLFKPCSCGE*ICCTHYHVGYG
Trigger: TCCATAGCCCACATGGTAATGGGTACAACAAATCAATTCTCCACAAGAACACGGCTTGAAGAGGTAAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000512852.1
CDS CAA 90 bp ATCCTTTTACCTCTTCAAGCCGTGTTCTTGTGGAGAATTGATTTGTaGTACCCATTACCATGTGGGCTATGGAAGATGAGCCAAGTTCAA +
Preference number: 6 (lower is better)
Translates to: ILLPLQAVFLWRIDL*YPLPCGLWKMSQVQ
Trigger: TTGAACTTGGCTCATCTTCCATAGCCCACATGGTAATGGGTACAACAAATCAATTCTCCACAAGAACACGGCTTGAAGAGGTAAAAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000512852.1
CDS CAA 90 bp AGAATCCTTTTACCTCTTCAAGCCGTGTTCTTGTGGAGAATTGATTaGTTGTACCCATTACCATGTGGGCTATGGAAGATGAGCCAAGTT +
Preference number: 6 (lower is better)
Translates to: RILLPLQAVFLWRID*LYPLPCGLWKMSQV
Trigger: AACTTGGCTCATCTTCCATAGCCCACATGGTAATGGGTACAACAAATCAATTCTCCACAAGAACACGGCTTGAAGAGGTAAAAGGATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000512852.1
CDS CAA 72 bp TTTGTTTTTAGCAAAAATCGATGGACCATGTCGGATTaGCTGGTGATGAATGTCAATGGAACATGCCACAGG +
Preference number: 6 (lower is better)
Translates to: FVFSKNRWTMSD*LVMNVNGTCHR
Trigger: CCTGTGGCATGTTCCATTGACATTCATCACCAGCAAATCCGACATGGTCCATCGATTTTTGCTAAAAACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000507859.1
ENST00000514604.5
CDS CAA 90 bp CTTATCCATCCAACCGATGTTTTCTTCAATGGTTTCAATTGTCTGTaGGACACAACGGAGCTGAGAACCATTTTCTTTCAAAGAGCTGAA +
Preference number: 6 (lower is better)
Translates to: LIHPTDVFFNGFNCL*DTTELRTIFFQRAE
Trigger: TTCAGCTCTTTGAAAGAAAATGGTTCTCAGCTCCGTTGTGTCCAACAGACAATTGAAACCATTGAAGAAAACATCGGTTGGATGGATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000512852.1
CDS TCA 72 bp GGTTTGCATGGATCAAGAGATCATAATGAACTGGGATaGCGTACTCAGGAAGTCGTATTTTATTCCAAGGAA +
Preference number: 6 (lower is better)
Translates to: GLHGSRDHNELG*RTQEVVFYSKE
Trigger: TTCCTTGGAATAAAATACGACTTCCTGAGTACGTCATCCCAGTTCATTATGATCTCTTGATCCATGCAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000503921.5
ENST00000507154.1
ENST00000508227.5
CDS GCA 72 bp ACAGATTTCACCAATGGCATATTGGAGATGGCTAGGTaGCTTGGCTCTCTTCTAATTTTGATTGAGAAACTT +
Preference number: 6 (lower is better)
Translates to: TDFTNGILEMAR*LGSLLILIEKL
Trigger: AAGTTTCTCAATCAAAATTAGAAGAGAGCCAAGGCACCTAGCCATCTCCAATATGCCATTGGTGAAATCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296754.7
ENST00000443439.7
CDS CAA 72 bp ATGGAAGATGAGCCAAGTTCAAACTTTTGTACAAGTTaGTTCCAGTTTTTCCTCAGAAATTGCCAGGCCAGT +
Preference number: 6 (lower is better)
Translates to: MEDEPSSNFCTS*FQFFLRNCQAS
Trigger: ACTGGCCTGGCAATTTCTGAGGAAAAACTGGAACAAACTTGTACAAAAGTTTGAACTTGGCTCATCTTCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000512852.1
CDS CAA 72 bp CCAACCGATGTTTTCTTCAATGGTTTCAATTGTCTGTaGGACACAACGGAGCTGAGAACCATTTTCTTTCAA +
Preference number: 6 (lower is better)
Translates to: PTDVFFNGFNCL*DTTELRTIFFQ
Trigger: TTGAAAGAAAATGGTTCTCAGCTCCGTTGTGTCCAACAGACAATTGAAACCATTGAAGAAAACATCGGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000512852.1
CDS CAA 72 bp TATCCATCCAACCGATGTTTTCTTCAATGGTTTCAATaGTCTGTTGGACACAACGGAGCTGAGAACCATTTT +
Preference number: 6 (lower is better)
Translates to: YPSNRCFLQWFQ*SVGHNGAENHF
Trigger: AAAATGGTTCTCAGCTCCGTTGTGTCCAACAGACAATTGAAACCATTGAAGAAAACATCGGTTGGATGGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000512852.1
CDS CAA 72 bp ACACAGGGTGTGAGGAATTTAAAGCATCTACCTCCATaGCGTCAAAACATTTGCCAAAGAAATAATCTCCAA +
Preference number: 6 (lower is better)
Translates to: TQGVRNLKHLPP*RQNICQRNNLQ
Trigger: TTGGAGATTATTTCTTTGGCAAATGTTTTGACGCAATGGAGGTAGATGCTTTAAATTCCTCACACCCTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296754.7
ENST00000443439.7
ENST00000503311.1
CDS CCA 72 bp TCCTACTGGGTTCCTGCCAATGAGTGTAAGAATTTGTaGAAACTCCTGAGTTTTTATTTTATCTCCCTTAAA +
Preference number: 6 (lower is better)
Translates to: SYWVPANECKNL*KLLSFYFISLK
Trigger: TTTAAGGGAGATAAAATAAAAACTCAGGAGTTTCCACAAATTCTTACACTCATTGGCAGGAACCCAGTAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296754.7
ENST00000443439.7