Pregenerated sensors for EQTN (Homo sapiens)
Ensembl gene IDs: ENSG00000120160Ensembl transcript IDs: ENST00000380032.8, ENST00000537675.5
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS TCA 90 bp | CACCTTCTGATGGATGAAAGTAAGACATCGTGGCCAGCTCTGGGTTaGCAGAGTACTGACTCTCACAACTTTTATAACTCAGATGCCTCA | + |
Preference number: 5 (lower is better) Translates to: HLLMDESKTSWPALG*QSTDSHNFYNSDAS Trigger: TGAGGCATCTGAGTTATAAAAGTTGTGAGAGTCAGTACTCTGTCAACCCAGAGCTGGCCACGATGTCTTACTTTCATCCATCAGAAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000380032.8 ENST00000537675.5 |
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CDS TCA 90 bp | GAGATTCCCAGCATTATTTTGATCTTCAGATCCTCTAGATCTGGCTaGTTTTCTCCCTGTGTAGCATTCACATCAGACTCTGGAATTGGG | + |
Preference number: 5 (lower is better) Translates to: EIPSIILIFRSSRSG*FSPCVAFTSDSGIG Trigger: CCCAATTCCAGAGTCTGATGTGAATGCTACACAGGGAGAAAATCAGCCAGATCTAGAGGATCTGAAGATCAAAATAATGCTGGGAATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000380032.8 ENST00000537675.5 |
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CDS CCA 90 bp | TATCTGAAGAAGTGGTACCCAAAAATGTGCTGCTCTCTGCACTCTTaGAAAAGGATGTATCTGAAACACCTTCTGATGGATGAAAGTAAG | + |
Preference number: 5 (lower is better) Translates to: YLKKWYPKMCCSLHS*KRMYLKHLLMDESK Trigger: CTTACTTTCATCCATCAGAAGGTGTTTCAGATACATCCTTTTCCAAGAGTGCAGAGAGCAGCACATTTTTGGGTACCACTTCTTCAGATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380032.8 ENST00000537675.5 |
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CDS TCA 90 bp | ATTAAAGTTATTTATTCATCAATAAGATTTCTTCACCGGGTTCCTTaGTTTCTTCACCGGGTAACCGACTCATCGTTTTCATGCATCTCA | + |
Preference number: 5 (lower is better) Translates to: IKVIYSSIRFLHRVP*FLHRVTDSSFSCIS Trigger: TGAGATGCATGAAAACGATGAGTCGGTTACCCGGTGAAGAAATCAAGGAACCCGGTGAAGAAATCTTATTGATGAATAAATAACTTTAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380032.8 |
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CDS TCA 72 bp | GGAGGAGGGTCATCAACGAGATTCCCAGCATTATTTTaGTCTTCAGATCCTCTAGATCTGGCTGATTTTCTC | + |
Preference number: 6 (lower is better) Translates to: GGGSSTRFPALF*SSDPLDLADFL Trigger: GAGAAAATCAGCCAGATCTAGAGGATCTGAAGATCAAAATAATGCTGGGAATCTCGTTGATGACCCTCCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000380032.8 ENST00000537675.5 |
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CDS CCA 72 bp | ATGTTCTTGTGCCTGATCTTCTCATATCTGAAGAAGTaGTACCCAAAAATGTGCTGCTCTCTGCACTCTTGG | + |
Preference number: 6 (lower is better) Translates to: MFLCLIFSYLKK*YPKMCCSLHSW Trigger: CCAAGAGTGCAGAGAGCAGCACATTTTTGGGTACCACTTCTTCAGATATGAGAAGATCAGGCACAAGAACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000380032.8 ENST00000537675.5 |
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CDS CAA 72 bp | GAAGTGGTACCCAAAAATGTGCTGCTCTCTGCACTCTaGGAAAAGGATGTATCTGAAACACCTTCTGATGGA | + |
Preference number: 6 (lower is better) Translates to: EVVPKNVLLSAL*EKDVSETPSDG Trigger: TCCATCAGAAGGTGTTTCAGATACATCCTTTTCCAAGAGTGCAGAGAGCAGCACATTTTTGGGTACCACTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380032.8 ENST00000537675.5 |
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CDS TCA 72 bp | ATGGATGAAAGTAAGACATCGTGGCCAGCTCTGGGTTaGCAGAGTACTGACTCTCACAACTTTTATAACTCA | + |
Preference number: 6 (lower is better) Translates to: MDESKTSWPALG*QSTDSHNFYNS Trigger: TGAGTTATAAAAGTTGTGAGAGTCAGTACTCTGTCAACCCAGAGCTGGCCACGATGTCTTACTTTCATCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000380032.8 ENST00000537675.5 |
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CDS CCA 72 bp | AAGTGGTACCCAAAAATGTGCTGCTCTCTGCACTCTTaGAAAAGGATGTATCTGAAACACCTTCTGATGGAT | + |
Preference number: 6 (lower is better) Translates to: KWYPKMCCSLHS*KRMYLKHLLMD Trigger: ATCCATCAGAAGGTGTTTCAGATACATCCTTTTCCAAGAGTGCAGAGAGCAGCACATTTTTGGGTACCACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000380032.8 ENST00000537675.5 |
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CDS TCA 72 bp | AGCATTATTTTGATCTTCAGATCCTCTAGATCTGGCTaGTTTTCTCCCTGTGTAGCATTCACATCAGACTCT | + |
Preference number: 6 (lower is better) Translates to: SIILIFRSSRSG*FSPCVAFTSDS Trigger: AGAGTCTGATGTGAATGCTACACAGGGAGAAAATCAGCCAGATCTAGAGGATCTGAAGATCAAAATAATGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000380032.8 ENST00000537675.5 |
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CDS CAA 72 bp | TATTTATTCATCAATAAGATTTCTTCACCGGGTTCCTaGATTTCTTCACCGGGTAACCGACTCATCGTTTTC | + |
Preference number: 6 (lower is better) Translates to: YLFINKISSPGS*ISSPGNRLIVF Trigger: GAAAACGATGAGTCGGTTACCCGGTGAAGAAATCAAGGAACCCGGTGAAGAAATCTTATTGATGAATAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380032.8 |