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Pregenerated sensors for EQTN (Homo sapiens)

Ensembl gene IDs: ENSG00000120160

Ensembl transcript IDs: ENST00000380032.8, ENST00000537675.5

Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp CACCTTCTGATGGATGAAAGTAAGACATCGTGGCCAGCTCTGGGTTaGCAGAGTACTGACTCTCACAACTTTTATAACTCAGATGCCTCA +
Preference number: 5 (lower is better)
Translates to: HLLMDESKTSWPALG*QSTDSHNFYNSDAS
Trigger: TGAGGCATCTGAGTTATAAAAGTTGTGAGAGTCAGTACTCTGTCAACCCAGAGCTGGCCACGATGTCTTACTTTCATCCATCAGAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380032.8
ENST00000537675.5
CDS TCA 90 bp GAGATTCCCAGCATTATTTTGATCTTCAGATCCTCTAGATCTGGCTaGTTTTCTCCCTGTGTAGCATTCACATCAGACTCTGGAATTGGG +
Preference number: 5 (lower is better)
Translates to: EIPSIILIFRSSRSG*FSPCVAFTSDSGIG
Trigger: CCCAATTCCAGAGTCTGATGTGAATGCTACACAGGGAGAAAATCAGCCAGATCTAGAGGATCTGAAGATCAAAATAATGCTGGGAATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380032.8
ENST00000537675.5
CDS CCA 90 bp TATCTGAAGAAGTGGTACCCAAAAATGTGCTGCTCTCTGCACTCTTaGAAAAGGATGTATCTGAAACACCTTCTGATGGATGAAAGTAAG +
Preference number: 5 (lower is better)
Translates to: YLKKWYPKMCCSLHS*KRMYLKHLLMDESK
Trigger: CTTACTTTCATCCATCAGAAGGTGTTTCAGATACATCCTTTTCCAAGAGTGCAGAGAGCAGCACATTTTTGGGTACCACTTCTTCAGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380032.8
ENST00000537675.5
CDS TCA 90 bp ATTAAAGTTATTTATTCATCAATAAGATTTCTTCACCGGGTTCCTTaGTTTCTTCACCGGGTAACCGACTCATCGTTTTCATGCATCTCA +
Preference number: 5 (lower is better)
Translates to: IKVIYSSIRFLHRVP*FLHRVTDSSFSCIS
Trigger: TGAGATGCATGAAAACGATGAGTCGGTTACCCGGTGAAGAAATCAAGGAACCCGGTGAAGAAATCTTATTGATGAATAAATAACTTTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380032.8
CDS TCA 72 bp GGAGGAGGGTCATCAACGAGATTCCCAGCATTATTTTaGTCTTCAGATCCTCTAGATCTGGCTGATTTTCTC +
Preference number: 6 (lower is better)
Translates to: GGGSSTRFPALF*SSDPLDLADFL
Trigger: GAGAAAATCAGCCAGATCTAGAGGATCTGAAGATCAAAATAATGCTGGGAATCTCGTTGATGACCCTCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380032.8
ENST00000537675.5
CDS CCA 72 bp ATGTTCTTGTGCCTGATCTTCTCATATCTGAAGAAGTaGTACCCAAAAATGTGCTGCTCTCTGCACTCTTGG +
Preference number: 6 (lower is better)
Translates to: MFLCLIFSYLKK*YPKMCCSLHSW
Trigger: CCAAGAGTGCAGAGAGCAGCACATTTTTGGGTACCACTTCTTCAGATATGAGAAGATCAGGCACAAGAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380032.8
ENST00000537675.5
CDS CAA 72 bp GAAGTGGTACCCAAAAATGTGCTGCTCTCTGCACTCTaGGAAAAGGATGTATCTGAAACACCTTCTGATGGA +
Preference number: 6 (lower is better)
Translates to: EVVPKNVLLSAL*EKDVSETPSDG
Trigger: TCCATCAGAAGGTGTTTCAGATACATCCTTTTCCAAGAGTGCAGAGAGCAGCACATTTTTGGGTACCACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380032.8
ENST00000537675.5
CDS TCA 72 bp ATGGATGAAAGTAAGACATCGTGGCCAGCTCTGGGTTaGCAGAGTACTGACTCTCACAACTTTTATAACTCA +
Preference number: 6 (lower is better)
Translates to: MDESKTSWPALG*QSTDSHNFYNS
Trigger: TGAGTTATAAAAGTTGTGAGAGTCAGTACTCTGTCAACCCAGAGCTGGCCACGATGTCTTACTTTCATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380032.8
ENST00000537675.5
CDS CCA 72 bp AAGTGGTACCCAAAAATGTGCTGCTCTCTGCACTCTTaGAAAAGGATGTATCTGAAACACCTTCTGATGGAT +
Preference number: 6 (lower is better)
Translates to: KWYPKMCCSLHS*KRMYLKHLLMD
Trigger: ATCCATCAGAAGGTGTTTCAGATACATCCTTTTCCAAGAGTGCAGAGAGCAGCACATTTTTGGGTACCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380032.8
ENST00000537675.5
CDS TCA 72 bp AGCATTATTTTGATCTTCAGATCCTCTAGATCTGGCTaGTTTTCTCCCTGTGTAGCATTCACATCAGACTCT +
Preference number: 6 (lower is better)
Translates to: SIILIFRSSRSG*FSPCVAFTSDS
Trigger: AGAGTCTGATGTGAATGCTACACAGGGAGAAAATCAGCCAGATCTAGAGGATCTGAAGATCAAAATAATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380032.8
ENST00000537675.5
CDS CAA 72 bp TATTTATTCATCAATAAGATTTCTTCACCGGGTTCCTaGATTTCTTCACCGGGTAACCGACTCATCGTTTTC +
Preference number: 6 (lower is better)
Translates to: YLFINKISSPGS*ISSPGNRLIVF
Trigger: GAAAACGATGAGTCGGTTACCCGGTGAAGAAATCAAGGAACCCGGTGAAGAAATCTTATTGATGAATAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380032.8