RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPSTI1 (Homo sapiens)

Ensembl gene IDs: ENSG00000133106

Ensembl transcript IDs: ENST00000313624.12, ENST00000313640.11, ENST00000398762.7, ENST00000476830.6, ENST00000535677.5, ENST00000536042.1, ENST00000537828.5, ENST00000538562.5, ENST00000540470.5, ENST00000542706.5

Found 326 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAACACAACTGTAAGGTAGCCAGGCTGGCAGGTGTAGGGCCGAAATaGCTGCACACCACCACACTAAAATGTCTGCTACAGCCGCACATT +
Preference number: 1 (lower is better)
Translates to: EHNCKVARLAGVGPK*LHTTTLKCLLQPHI
Trigger: AATGTGCGGCTGTAGCAGACATTTTAGTGTGGTGGTGTGCAGCCATTTCGGCCCTACACCTGCCAGCCTGGCTACCTTACAGTTGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR CCA 90 bp AGGACAAGGAGAAGCCAGTCACTCCTGACTGCACGGTCAAGTGTGTaGGCAGTTGAAATTAAGGTAAAAACAGTGAGGCTGAACAAAATC +
Preference number: 1 (lower is better)
Translates to: RTRRSQSLLTARSSV*AVEIKVKTVRLNKI
Trigger: GATTTTGTTCAGCCTCACTGTTTTTACCTTAATTTCAACTGCCCACACACTTGACCGTGCAGTCAGGAGTGACTGGCTTCTCCTTGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313624.12
3UTR GCA 90 bp AAAGTAAGAAAGCATCCCTTTTTCCTACGTCAACTCCTGGTTGCATaGTGGAAAATGCAGCAAGTGAGGCACACCAAGCATAGACGCAAA +
Preference number: 1 (lower is better)
Translates to: KVRKHPFFLRQLLVA*WKMQQVRHTKHRRK
Trigger: TTTGCGTCTATGCTTGGTGTGCCTCACTTGCTGCATTTTCCAGCATGCAACCAGGAGTTGACGTAGGAAAAAGGGATGCTTTCTTACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR GCA 90 bp TGGGCTCCTTTAGGCAGCAAGTCTTGCTTCTCTCCTGGTTACCTCTaGCTACATAGATATTTGGTTAAGCAAGATGTTTATACCCCCACA +
Preference number: 1 (lower is better)
Translates to: WAPLGSKSCFSPGYL*LHRYLVKQDVYTPT
Trigger: TGTGGGGGTATAAACATCTTGCTTAACCAAATATCTATGTAGGCAGAGGTAACCAGGAGAGAAGCAAGACTTGCTGCCTAAAGGAGCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR CCA 90 bp GATTCTTCTCTTTTTAGCTTTTGCTTGTATTTAGATTGCATCAGCTaGAGTTGTTGTTTCTGTCTGACTTCAGTTTCTGACTGGCTTCCA +
Preference number: 1 (lower is better)
Translates to: DSSLFSFCLYLDCIS*SCCFCLTSVSDWLP
Trigger: TGGAAGCCAGTCAGAAACTGAAGTCAGACAGAAACAACAACTCCAGCTGATGCAATCTAAATACAAGCAAAAGCTAAAAAGAGAAGAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538562.5
3UTR-3UTR CCA 90 bp TGCAGGGTAGGCCAGGCAGTGGAGGAGAAATTGACACCAACTTCCCTGAGAGCTATACAATGTGGTGGCTaGGGGACGGTGAGGCGGAGG +
Preference number: 2 (lower is better)
Translates to: CRVGQAVEEKLTPTSLRAIQCGG*GTVRRR
Trigger: CCTCCGCCTCACCGTCCCCCAGCCACCACATTGTAT...AGCTCTCAGGGAAGTTGGTGTCAATTTCTCCTCCACTGCCTGGCCTACCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR TCA 90 bp AGTGCACCCTTGCCTAGCTCTGCGAACCCCTCAGTTATGTCTCTTGGCCCAAGAGAAGCCAGTCACTCCTaGCTGCACGGTCAAGTGTGT +
Preference number: 2 (lower is better)
Translates to: SAPLPSSANPSVMSLGPREASHS*LHGQVC
Trigger: ACACACTTGACCGTGCAGTCAGGAGTGACTGGCTTC...TCTTGGGCCAAGAGACATAACTGAGGGGTTCGCAGAGCTAGGCAAGGGTGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313624.12
3UTR-3UTR GCA 90 bp TGCAGGGTAGGCCAGGCAGTGGAGGAGAAATTGACACCAACTTCCCTGAGAGCTTTCCTAGTGCACCCTTaGCTAGCTCTGCGAACCCCT +
Preference number: 2 (lower is better)
Translates to: CRVGQAVEEKLTPTSLRAFLVHP*LALRTP
Trigger: AGGGGTTCGCAGAGCTAGGCAAGGGTGCACTAGGAA...AGCTCTCAGGGAAGTTGGTGTCAATTTCTCCTCCACTGCCTGGCCTACCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR TCA 90 bp TACCCATCTGCACAAAATCTTTGGGAGTGCAGGGTAGGCCAGGCAGTGGAGGAGAGGGGACAGAGGGATTaGGCTAGATTACACAGCGTA +
Preference number: 2 (lower is better)
Translates to: YPSAQNLWECRVGQAVEERGQRD*ARLHSV
Trigger: TACGCTGTGTAATCTAGCTCAATCCCTCTGTCCCCT...CTCCTCCACTGCCTGGCCTACCCTGCACTCCCAAAGATTTTGTGCAGATGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR CCA 90 bp ACCCACCAATGTGGCCCTTTCCTAGTGCACCCTTGCCTAGCTCTGCGAACCCCTGCACGGTCAAGTGTGTaGGCAGTTGAAATTAAGGTA +
Preference number: 2 (lower is better)
Translates to: THQCGPFLVHPCLALRTPARSSV*AVEIKV
Trigger: TACCTTAATTTCAACTGCCCACACACTTGACCGTGC...AGGGGTTCGCAGAGCTAGGCAAGGGTGCACTAGGAAAGGGCCACATTGGTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313624.12
3UTR-3UTR CCA 90 bp CATCCCTTTTTCCTACGTCAACTCCTGGTTGCATGCTGGAAAATGCAGCAAGTGCCCCACCCACCAATGTaGCCCTTTCCTAGTGCACCC +
Preference number: 2 (lower is better)
Translates to: HPFFLRQLLVACWKMQQVPHPPM*PFPSAP
Trigger: GGGTGCACTAGGAAAGGGCCACATTGGTGGGTGGGG...CACTTGCTGCATTTTCCAGCATGCAACCAGGAGTTGACGTAGGAAAAAGGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR TCA 90 bp GCAGGTGTAGGGCCGAAATGGCTGCACACCACCACACTAAAATGTCTGCTACAGTTACACTCTAGGGTCTaGGAACTGGTTCAGGGTCAC +
Preference number: 2 (lower is better)
Translates to: AGVGPKWLHTTTLKCLLQLHSRV*ELVQGH
Trigger: GTGACCCTGAACCAGTTCTCAGACCCTAGAGTGTAA...CTGTAGCAGACATTTTAGTGTGGTGGTGTGCAGCCATTTCGGCCCTACACCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR TCA 90 bp TGGAACTACCCATCTGCACAAAATCTTTGGGAGTGCAGGGTAGGCCAGGCAGTGAGGGGACAGAGGGATTaGGCTAGATTACACAGCGTA +
Preference number: 2 (lower is better)
Translates to: WNYPSAQNLWECRVGQAVRGQRD*ARLHSV
Trigger: TACGCTGTGTAATCTAGCTCAATCCCTCTGTCCCCT...CACTGCCTGGCCTACCCTGCACTCCCAAAGATTTTGTGCAGATGGGTAGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR TCA 90 bp TGGCCCTTTCCTAGTGCACCCTTGCCTAGCTCTGCGAACCCCTCAGTTATGTCTCCAAACATGCATAAATaGGGACAAGGAGAAGCCAGT +
Preference number: 2 (lower is better)
Translates to: WPFPSAPLPSSANPSVMSPNMHK*GQGEAS
Trigger: ACTGGCTTCTCCTTGTCCTCATTTATGCATGTTTGG...AGACATAACTGAGGGGTTCGCAGAGCTAGGCAAGGGTGCACTAGGAAAGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313624.12
3UTR-3UTR CCA 90 bp ATAGAAATGGTGGAACTTTGGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTTTTGCTATACAATGTGGTaGCTGGGGGACGGTGAGGCG +
Preference number: 2 (lower is better)
Translates to: IEMVELWDFLSSHLRVRFCYTMW*LGDGEA
Trigger: CGCCTCACCGTCCCCCAGCCACCACATTGTATAGCA...AAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAAAGTTCCACCATTTCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR CCA 90 bp AGTGTCAACAGCACTAACACAGCTTCAGCTGGCGGAGGAGAGGGAAACCAAGAATTTTGCTATACAATGTaGTGGCTGGGGGACGGTGAG +
Preference number: 2 (lower is better)
Translates to: SVNSTNTASAGGGEGNQEFCYTM*WLGDGE
Trigger: CTCACCGTCCCCCAGCCACCACATTGTATAGCAAAA...TTCTTGGTTTCCCTCTCCTCCGCCAGCTGAAGCTGTGTTAGTGCTGTTGACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR CAA 90 bp CAAAATCTTTGGGAGTGCAGGGTAGGCCAGGCAGTGGAGGAGAAATaGACACCAACTTCCCTGAGAGCTTCCAAAGTAAGAAAGCATCCC +
Preference number: 2 (lower is better)
Translates to: QNLWECRVGQAVEEK*TPTSLRASKVRKHP
Trigger: GGGATGCTTTCTTACTTTGGAAGCTCTCAGGGAAGTTGGTGTCAATTTCTCCTCCACTGCCTGGCCTACCCTGCACTCCCAAAGATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR TCA 90 bp GTAAAATGGTGGGCTCCTTTAGGCAGCAAGTCTTGCTTCTCTCCTGGTTACCTCTTACACTCTAGGGTCTaGGAACTGGTTCAGGGTCAC +
Preference number: 2 (lower is better)
Translates to: VKWWAPLGSKSCFSPGYLLHSRV*ELVQGH
Trigger: GTGACCCTGAACCAGTTCTCAGACCCTAGAGTGTAA...GAGGTAACCAGGAGAGAAGCAAGACTTGCTGCCTAAAGGAGCCCACCATTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR GCA 90 bp AAATGGTGGAACTTTGGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTTTTATTCCAGTCACTCCTGACTaGACGGTCAAGTGTGTGGGC +
Preference number: 2 (lower is better)
Translates to: KWWNFGISCPVTCESGFIPVTPD*TVKCVG
Trigger: GCCCACACACTTGACCGTGCAGTCAGGAGTGACTGG...AATAAAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAAAGTTCCACCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313624.12
3UTR-3UTR CCA 90 bp TGGGAGTGCAGGGTAGGCCAGGCAGTGGAGGAGAAATTGACACCAACTTCCCTGCTCAGTTATGTCTCTTaGCCCAAGAATTTCAAAACC +
Preference number: 2 (lower is better)
Translates to: WECRVGQAVEEKLTPTSLLSYVS*PKNFKT
Trigger: GGTTTTGAAATTCTTGGGCCAAGAGACATAACTGAG...CAGGGAAGTTGGTGTCAATTTCTCCTCCACTGCCTGGCCTACCCTGCACTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR CCA 90 bp GTAAAATGGTGGGCTCCTTTAGGCAGCAAGTCTTGCTTCTCTCCTGGTTACCTCCTCCTGGTTGCATGCTaGAAAATGCAGCAAGTGAGG +
Preference number: 2 (lower is better)
Translates to: VKWWAPLGSKSCFSPGYLLLVAC*KMQQVR
Trigger: CCTCACTTGCTGCATTTTCCAGCATGCAACCAGGAG...GAGGTAACCAGGAGAGAAGCAAGACTTGCTGCCTAAAGGAGCCCACCATTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR TCA 90 bp TGGAACTACCCATCTGCACAAAATCTTTGGGAGTGCAGGGTAGGCCAGGCAGTGAGAAAAAGCATCTCATaGGGCTTTTCGAGGTCAGTT +
Preference number: 2 (lower is better)
Translates to: WNYPSAQNLWECRVGQAVRKSIS*GFSRSV
Trigger: AACTGACCTCGAAAAGCCTCATGAGATGCTTTTTCT...CACTGCCTGGCCTACCCTGCACTCCCAAAGATTTTGTGCAGATGGGTAGTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313624.12
3UTR-3UTR TCA 90 bp TGGAACTACCCATCTGCACAAAATCTTTGGGAGTGCAGGGTAGGCCAGGCAGTGCCCCATATAAGGCAATaGCAAGGATTTCAAATGGAC +
Preference number: 2 (lower is better)
Translates to: WNYPSAQNLWECRVGQAVPHIRQ*QGFQMD
Trigger: GTCCATTTGAAATCCTTGTCATTGCCTTATATGGGG...CACTGCCTGGCCTACCCTGCACTCCCAAAGATTTTGTGCAGATGGGTAGTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR CCA 90 bp TTGGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTTTTATTCCAATTGATTCAATGCTATACAATGTGGTaGCTGGGGGACGGTGAGGCG +
Preference number: 2 (lower is better)
Translates to: LGFPVQSPASQVLFQLIQCYTMW*LGDGEA
Trigger: CGCCTCACCGTCCCCCAGCCACCACATTGTATAGCA...TTGAATCAATTGGAATAAAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR CCA 90 bp CGTGGCAGATTAAATGTGAAAAGTAAAATGGTGGGCTCCTTTAGGCAGCAAGTCGGTGTAGGGCCGAAATaGCTGCACACCACCACACTA +
Preference number: 2 (lower is better)
Translates to: RGRLNVKSKMVGSFRQQVGVGPK*LHTTTL
Trigger: TAGTGTGGTGGTGTGCAGCCATTTCGGCCCTACACC...GACTTGCTGCCTAAAGGAGCCCACCATTTTACTTTTCACATTTAATCTGCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR CCA 90 bp GTAAAATGGTGGGCTCCTTTAGGCAGCAAGTCTTGCTTCTCTCCTGGTTACCTCTCCTACGTCAACTCCTaGTTGCATGCTGGAAAATGC +
Preference number: 2 (lower is better)
Translates to: VKWWAPLGSKSCFSPGYLSYVNS*LHAGKC
Trigger: GCATTTTCCAGCATGCAACCAGGAGTTGACGTAGGA...GAGGTAACCAGGAGAGAAGCAAGACTTGCTGCCTAAAGGAGCCCACCATTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR TCA 90 bp AGTGTCAACAGCACTAACACAGCTTCAGCTGGCGGAGGAGAGGGAAACCAAGAATCAGGGTCACAGAAGTaGATAAGAAAGCCAACTGAA +
Preference number: 2 (lower is better)
Translates to: SVNSTNTASAGGGEGNQESGSQK*IRKPTE
Trigger: TTCAGTTGGCTTTCTTATTCACTTCTGTGACCCTGA...TTCTTGGTTTCCCTCTCCTCCGCCAGCTGAAGCTGTGTTAGTGCTGTTGACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR TCA 90 bp TGGAACTACCCATCTGCACAAAATCTTTGGGAGTGCAGGGTAGGCCAGGCAGTGAACCCCATGTTTTCCTaGATAAAGAGATTCGGAAAG +
Preference number: 2 (lower is better)
Translates to: WNYPSAQNLWECRVGQAVNPMFS*IKRFGK
Trigger: CTTTCCGAATCTCTTTATTCAGGAAAACATGGGGTT...CACTGCCTGGCCTACCCTGCACTCCCAAAGATTTTGTGCAGATGGGTAGTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR CCA 90 bp ATAGAAATGGTGGAACTTTGGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTTTATTTCCAACACAGGCTaGGGGATTGAGTTTCCCCCA +
Preference number: 2 (lower is better)
Translates to: IEMVELWDFLSSHLRVRFISNTG*GIEFPP
Trigger: TGGGGGAAACTCAATCCCCCAGCCTGTGTTGGAAAT...AAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAAAGTTCCACCATTTCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR CCA 90 bp AAATGGTGGAACTTTGGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTTTTATTATTTCCAACACAGGCTaGGGGATTGAGTTTCCCCCA +
Preference number: 2 (lower is better)
Translates to: KWWNFGISCPVTCESGFIISNTG*GIEFPP
Trigger: TGGGGGAAACTCAATCCCCCAGCCTGTGTTGGAAAT...AATAAAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAAAGTTCCACCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR TCA 90 bp CGTGGCAGATTAAATGTGAAAAGTAAAATGGTGGGCTCCTTTAGGCAGCAAGTCCCTGAAAGCATCAAGTaGCTCCCTCTTTTTCTACCC +
Preference number: 2 (lower is better)
Translates to: RGRLNVKSKMVGSFRQQVPESIK*LPLFLP
Trigger: GGGTAGAAAAAGAGGGAGTCACTTGATGCTTTCAGG...GACTTGCTGCCTAAAGGAGCCCACCATTTTACTTTTCACATTTAATCTGCCACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR GCA 90 bp AAGCATCCCTTTTTCCTACGTCAACTCCTGGTTGCATGCTGGAAAATGCAGCAACAGCTCCTCCAAACATaGATAAATGAGGACAAGGAG +
Preference number: 2 (lower is better)
Translates to: KHPFFLRQLLVACWKMQQQLLQT*INEDKE
Trigger: CTCCTTGTCCTCATTTATGCATGTTTGGAGGAGCTG...TTGCTGCATTTTCCAGCATGCAACCAGGAGTTGACGTAGGAAAAAGGGATGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313624.12
3UTR-3UTR TCA 90 bp AAGCATCCCTTTTTCCTACGTCAACTCCTGGTTGCATGCTGGAAAATGCAGCAAAACCCCATGTTTTCCTaGATAAAGAGATTCGGAAAG +
Preference number: 2 (lower is better)
Translates to: KHPFFLRQLLVACWKMQQNPMFS*IKRFGK
Trigger: CTTTCCGAATCTCTTTATTCAGGAAAACATGGGGTT...TTGCTGCATTTTCCAGCATGCAACCAGGAGTTGACGTAGGAAAAAGGGATGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR TCA 90 bp CGTGGCAGATTAAATGTGAAAAGTAAAATGGTGGGCTCCTTTAGGCAGCAAGTCCCCCATATAAGGCAATaGCAAGGATTTCAAATGGAC +
Preference number: 2 (lower is better)
Translates to: RGRLNVKSKMVGSFRQQVPHIRQ*QGFQMD
Trigger: GTCCATTTGAAATCCTTGTCATTGCCTTATATGGGG...GACTTGCTGCCTAAAGGAGCCCACCATTTTACTTTTCACATTTAATCTGCCACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR CCA 90 bp AGAATATCCACATTATTTACTCCAGAGAAACTTCCTGACACCATCTGTTCTCTGCTAGGGTCTGAGAACTaGTTCAGGGTCACAGAAGTG +
Preference number: 2 (lower is better)
Translates to: RISTLFTPEKLPDTICSLLGSEN*FRVTEV
Trigger: CACTTCTGTGACCCTGAACCAGTTCTCAGACCCTAG...CAGAGAACAGATGGTGTCAGGAAGTTTCTCTGGAGTAAATAATGTGGATATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR TCA 90 bp GCCAACAGTAATGACAGTACTATATTTGATCTATACGGCCTGGAAAAGGGAATTCCTGAAAGCATCAAGTaGCTCCCTCTTTTTCTACCC +
Preference number: 2 (lower is better)
Translates to: ANSNDSTIFDLYGLEKGIPESIK*LPLFLP
Trigger: GGGTAGAAAAAGAGGGAGTCACTTGATGCTTTCAGG...AATTCCCTTTTCCAGGCCGTATAGATCAAATATAGTACTGTCATTACTGTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR TCA 90 bp TTGGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTTTTATTCCAATTGATTCAATTCATTTCAACAGAGTaGCTGGTAACACAGAAGATC +
Preference number: 2 (lower is better)
Translates to: LGFPVQSPASQVLFQLIQFISTE*LVTQKI
Trigger: GATCTTCTGTGTTACCAGTCACTCTGTTGAAATGAA...TTGAATCAATTGGAATAAAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR GCA 90 bp TTGGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTTTTATTCCAATTGATTCAAAGCGTAGAAAATCAATaGTCTTACACTCTAGGGTCT +
Preference number: 2 (lower is better)
Translates to: LGFPVQSPASQVLFQLIQSVENQ*SYTLGS
Trigger: AGACCCTAGAGTGTAAGAGCATTGATTTTCTACGCT...TTGAATCAATTGGAATAAAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR CAA 90 bp AGCAAGTCTTGCTTCTCTCCTGGTTACCTCTGCCTACATAGATATTaGGTTAAGCAAGATGTTTATACCCCCACACATATTCTAGATAGT +
Preference number: 2 (lower is better)
Translates to: SKSCFSPGYLCLHRY*VKQDVYTPTHILDS
Trigger: ACTATCTAGAATATGTGTGGGGGTATAAACATCTTGCTTAACCAAATATCTATGTAGGCAGAGGTAACCAGGAGAGAAGCAAGACTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR CAA 90 bp CTCCTCCAGTTTATTGCTCTTCTCTCTCTGAATTGCCTTCATTTTTaGGAGTTCAGCTTCTTCAGCTTCCTTCTTGATTCTTACAGATTC +
Preference number: 2 (lower is better)
Translates to: LLQFIALLSLNCLHF*EFSFFSFLLDSYRF
Trigger: GAATCTGTAAGAATCAAGAAGGAAGCTGAAGAAGCTGAACTCCAAAAAATGAAGGCAATTCAGAGAGAGAAGAGCAATAAACTGGAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538562.5
3UTR-3UTR GCA 90 bp GAAATTGACACCAACTTCCCTGAGAGCTTCCAAAGTAAGAAAGCATCCCTTTTTAGCGTAGAAAATCAATaGTCTTACACTCTAGGGTCT +
Preference number: 2 (lower is better)
Translates to: EIDTNFPESFQSKKASLFSVENQ*SYTLGS
Trigger: AGACCCTAGAGTGTAAGAGCATTGATTTTCTACGCT...AAAAAGGGATGCTTTCTTACTTTGGAAGCTCTCAGGGAAGTTGGTGTCAATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR TCA 90 bp ATTGAGTTTCCCCCATATAAGGCAATGACAAGGATTTCAAATGGACCAAACATTTCAGGGTCACAGAAGTaGATAAGAAAGCCAACTGAA +
Preference number: 2 (lower is better)
Translates to: IEFPPYKAMTRISNGPNISGSQK*IRKPTE
Trigger: TTCAGTTGGCTTTCTTATTCACTTCTGTGACCCTGA...AATGTTTGGTCCATTTGAAATCCTTGTCATTGCCTTATATGGGGGAAACTCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR TCA 90 bp AGAATATCCACATTATTTACTCCAGAGAAACTTCCTGACACCATCTGTTCTCTGTTCATTTCAACAGAGTaGCTGGTAACACAGAAGATC +
Preference number: 2 (lower is better)
Translates to: RISTLFTPEKLPDTICSLFISTE*LVTQKI
Trigger: GATCTTCTGTGTTACCAGTCACTCTGTTGAAATGAA...CAGAGAACAGATGGTGTCAGGAAGTTTCTCTGGAGTAAATAATGTGGATATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR CCA 90 bp ACCACACTAAAATGTCTGCTACAGCCGCACATTTACAATCAGTTTGGTGATATTCTCAGTTATGTCTCTTaGCCCAAGAATTTCAAAACC +
Preference number: 2 (lower is better)
Translates to: TTLKCLLQPHIYNQFGDILSYVS*PKNFKT
Trigger: GGTTTTGAAATTCTTGGGCCAAGAGACATAACTGAG...AATATCACCAAACTGATTGTAAATGTGCGGCTGTAGCAGACATTTTAGTGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR TCA 90 bp GTTTATACCCCCACACATATTCTAGATAGTTCTGGTCATGAAGTAAGTCACAATGTCCAGCTGCAAAGATaGTTTGTTGTATTTACCTTT +
Preference number: 2 (lower is better)
Translates to: VYTPTHILDSSGHEVSHNVQLQR*FVVFTF
Trigger: AAAGGTAAATACAACAAATCATCTTTGCAGCTGGAC...ATTGTGACTTACTTCATGACCAGAACTATCTAGAATATGTGTGGGGGTATAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR CAA 90 bp TGGGAGTGCAGGGTAGGCCAGGCAGTGGAGGAGAAATTGACACCAACTTCCCTGTTTCCTAGTGCACCCTaGCCTAGCTCTGCGAACCCC +
Preference number: 3 (lower is better)
Translates to: WECRVGQAVEEKLTPTSLFPSAP*PSSANP
Trigger: GGGGTTCGCAGAGCTAGGCAAGGGTGCACTAGGAAA...CAGGGAAGTTGGTGTCAATTTCTCCTCCACTGCCTGGCCTACCCTGCACTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR GCA 72 bp CCCACCCACCAATGTGGCCCTTTCCTAGTGCACCCTTaGCTAGCTCTGCGAACCCCTCAGTTATGTCTCTTG +
Preference number: 3 (lower is better)
Translates to: PTHQCGPFLVHP*LALRTPQLCLL
Trigger: CAAGAGACATAACTGAGGGGTTCGCAGAGCTAGGCAAGGGTGCACTAGGAAAGGGCCACATTGGTGGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR CAA 90 bp GAACTACCCATCTGCACAAAATCTTTGGGAGTGCAGGGTAGGCCAGGCAGTGGATTTCCTAGTGCACCCTaGCCTAGCTCTGCGAACCCC +
Preference number: 3 (lower is better)
Translates to: ELPICTKSLGVQGRPGSGFPSAP*PSSANP
Trigger: GGGGTTCGCAGAGCTAGGCAAGGGTGCACTAGGAAA...TCCACTGCCTGGCCTACCCTGCACTCCCAAAGATTTTGTGCAGATGGGTAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR CAA 90 bp GAACTACCCATCTGCACAAAATCTTTGGGAGTGCAGGGTAGGCCAGGCAGTGGAACACAGGCTGGGGGATaGAGTTTCCCCCATATAAGG +
Preference number: 3 (lower is better)
Translates to: ELPICTKSLGVQGRPGSGTQAGG*SFPHIR
Trigger: CCTTATATGGGGGAAACTCAATCCCCCAGCCTGTGT...TCCACTGCCTGGCCTACCCTGCACTCCCAAAGATTTTGTGCAGATGGGTAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR CAA 90 bp TGGGAGTGCAGGGTAGGCCAGGCAGTGGAGGAGAAATTGACACCAACTTCCCTGATGACAGTACTATATTaGATCTATACGGCCTGGAAA +
Preference number: 3 (lower is better)
Translates to: WECRVGQAVEEKLTPTSLMTVLY*IYTAWK
Trigger: TTTCCAGGCCGTATAGATCAAATATAGTACTGTCAT...CAGGGAAGTTGGTGTCAATTTCTCCTCCACTGCCTGGCCTACCCTGCACTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR CAA 90 bp TGGAACTACCCATCTGCACAAAATCTTTGGGAGTGCAGGGTAGGCCAGGCAGTGCCTCAGTTATGTCTCTaGGCCCAAGAATTTCAAAAC +
Preference number: 3 (lower is better)
Translates to: WNYPSAQNLWECRVGQAVPQLCL*AQEFQN
Trigger: GTTTTGAAATTCTTGGGCCAAGAGACATAACTGAGG...CACTGCCTGGCCTACCCTGCACTCCCAAAGATTTTGTGCAGATGGGTAGTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR GCA 72 bp AAGCATCCCTTTTTCCTACGTCAACTCCTGGTTGCATaGTGGAAAATGCAGCAAGTGAGGCACACCAAGCAT +
Preference number: 3 (lower is better)
Translates to: KHPFFLRQLLVA*WKMQQVRHTKH
Trigger: ATGCTTGGTGTGCCTCACTTGCTGCATTTTCCAGCATGCAACCAGGAGTTGACGTAGGAAAAAGGGATGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR GCA 72 bp AAATGGAACTACCCATCTGCACAAAATCTTTGGGAGTaGAGGGTAGGCCAGGCAGTGGAGGAGAAATTGACA +
Preference number: 3 (lower is better)
Translates to: KWNYPSAQNLWE*RVGQAVEEKLT
Trigger: TGTCAATTTCTCCTCCACTGCCTGGCCTACCCTGCACTCCCAAAGATTTTGTGCAGATGGGTAGTTCCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR CAA 90 bp ATAGAAATGGTGGAACTTTGGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTTTTACGTCAACTCCTGGTaGCATGCTGGAAAATGCAGC +
Preference number: 3 (lower is better)
Translates to: IEMVELWDFLSSHLRVRFYVNSW*HAGKCS
Trigger: GCTGCATTTTCCAGCATGCAACCAGGAGTTGACGTA...AAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAAAGTTCCACCATTTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR CAA 90 bp GCAGGTGTAGGGCCGAAATGGCTGCACACCACCACACTAAAATGTCTGCTACAGATGTGTATACAAACATaGGCCTTTCTGGAGATAAAC +
Preference number: 3 (lower is better)
Translates to: AGVGPKWLHTTTLKCLLQMCIQT*AFLEIN
Trigger: GTTTATCTCCAGAAAGGCCAATGTTTGTATACACAT...CTGTAGCAGACATTTTAGTGTGGTGGTGTGCAGCCATTTCGGCCCTACACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR GCA 72 bp AAGAAAGCATCCCTTTTTCCTACGTCAACTCCTGGTTaGATGCTGGAAAATGCAGCAAGTGAGGCACACCAA +
Preference number: 3 (lower is better)
Translates to: KKASLFPTSTPG*MLENAASEAHQ
Trigger: TTGGTGTGCCTCACTTGCTGCATTTTCCAGCATGCAACCAGGAGTTGACGTAGGAAAAAGGGATGCTTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR CAA 90 bp TTAGTGTCAACAGCACTAACACAGCTTCAGCTGGCGGAGGAGAGGGAAACCAAGATGACAGTACTATATTaGATCTATACGGCCTGGAAA +
Preference number: 3 (lower is better)
Translates to: LVSTALTQLQLAEERETKMTVLY*IYTAWK
Trigger: TTTCCAGGCCGTATAGATCAAATATAGTACTGTCAT...CTTGGTTTCCCTCTCCTCCGCCAGCTGAAGCTGTGTTAGTGCTGTTGACACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR GCA 72 bp AAAGTAAAATGGTGGGCTCCTTTAGGCAGCAAGTCTTaGTTCTCTCCTGGTTACCTCTGCCTACATAGATAT +
Preference number: 3 (lower is better)
Translates to: KVKWWAPLGSKS*FSPGYLCLHRY
Trigger: ATATCTATGTAGGCAGAGGTAACCAGGAGAGAAGCAAGACTTGCTGCCTAAAGGAGCCCACCATTTTACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR GCA 72 bp AAATGGTGGAACTTTGGGATTTCCTGTCCAGTCACCTaGGAGTCAGGTTTTATTCCAATTGATTCAACGTGG +
Preference number: 3 (lower is better)
Translates to: KWWNFGISCPVT*ESGFIPIDSTW
Trigger: CCACGTTGAATCAATTGGAATAAAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAAAGTTCCACCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR CCA 72 bp GGGACATTAAAATTAAGCATAGAAATGGTGGAACTTTaGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTTT +
Preference number: 3 (lower is better)
Translates to: GTLKLSIEMVEL*DFLSSHLRVRF
Trigger: AAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAAAGTTCCACCATTTCTATGCTTAATTTTAATGTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR-3UTR CAA 90 bp AAATGGTGGAACTTTGGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTTTTATTATGTGTATACAAACATaGGCCTTTCTGGAGATAAAC +
Preference number: 3 (lower is better)
Translates to: KWWNFGISCPVTCESGFIMCIQT*AFLEIN
Trigger: GTTTATCTCCAGAAAGGCCAATGTTTGTATACACAT...AATAAAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAAAGTTCCACCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR GCA 72 bp TTAGGCAGCAAGTCTTGCTTCTCTCCTGGTTACCTCTaGCTACATAGATATTTGGTTAAGCAAGATGTTTAT +
Preference number: 3 (lower is better)
Translates to: LGSKSCFSPGYL*LHRYLVKQDVY
Trigger: ATAAACATCTTGCTTAACCAAATATCTATGTAGGCAGAGGTAACCAGGAGAGAAGCAAGACTTGCTGCCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR CCA 72 bp CTTTTTAGCTTTTGCTTGTATTTAGATTGCATCAGCTaGAGTTGTTGTTTCTGTCTGACTTCAGTTTCTGAC +
Preference number: 3 (lower is better)
Translates to: LFSFCLYLDCIS*SCCFCLTSVSD
Trigger: GTCAGAAACTGAAGTCAGACAGAAACAACAACTCCAGCTGATGCAATCTAAATACAAGCAAAAGCTAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538562.5
CDS-3UTR GCA 90 bp TGGGAGTGCAGGGTAGGCCAGGCAGTGGAGGAGAAATTGACACCAACTTCCCTGCGCCTCTGGCCCGCGTaGACGACGCTCTCCCGCGAA +
Preference number: 4 (lower is better)
Translates to: WECRVGQAVEEKLTPTSLRLWPA*TTLSRE
Trigger: TTCGCGGGAGAGCGTCGTGCACGCGGGCCAGAGGCG...CAGGGAAGTTGGTGTCAATTTCTCCTCCACTGCCTGGCCTACCCTGCACTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp TGGCCCTTTCCTAGTGCACCCTTGCCTAGCTCTGCGAACCCCTCAGTTATGTCTCGCCCAGAAGGGTCCTaGGGATCCCGGGTCGGGCGG +
Preference number: 4 (lower is better)
Translates to: WPFPSAPLPSSANPSVMSRPEGS*GSRVGR
Trigger: CCGCCCGACCCGGGATCCCCAGGACCCTTCTGGGCG...AGACATAACTGAGGGGTTCGCAGAGCTAGGCAAGGGTGCACTAGGAAAGGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp GCAGGTGTAGGGCCGAAATGGCTGCACACCACCACACTAAAATGTCTGCTACAGGGGCTCAGCTCCCCTTaGCGCCCAGAAGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: AGVGPKWLHTTTLKCLLQGLSSP*RPEGSW
Trigger: CCAGGACCCTTCTGGGCGGCAAGGGGAGCTGAGCCC...CTGTAGCAGACATTTTAGTGTGGTGGTGTGCAGCCATTTCGGCCCTACACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp AGTGTCAACAGCACTAACACAGCTTCAGCTGGCGGAGGAGAGGGAAACCAAGAACGCCTCTGGCCCGCGTaGACGACGCTCTCCCGCGAA +
Preference number: 4 (lower is better)
Translates to: SVNSTNTASAGGGEGNQERLWPA*TTLSRE
Trigger: TTCGCGGGAGAGCGTCGTGCACGCGGGCCAGAGGCG...TTCTTGGTTTCCCTCTCCTCCGCCAGCTGAAGCTGTGTTAGTGCTGTTGACACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp TGGAGTTGTTGTTTCTGTCTGACTTCAGTTTCTGACTGGCTTCCACCTAGCCGTCGCCTCTGGCCCGCGTaGACGACGCTCTCCCGCGAA +
Preference number: 4 (lower is better)
Translates to: WSCCFCLTSVSDWLPPSRRLWPA*TTLSRE
Trigger: TTCGCGGGAGAGCGTCGTGCACGCGGGCCAGAGGCG...ACGGCTAGGTGGAAGCCAGTCAGAAACTGAAGTCAGACAGAAACAACAACTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538562.5
CDS-3UTR CCA 90 bp TGGAGTTGTTGTTTCTGTCTGACTTCAGTTTCTGACTGGCTTCCACCTAGCCGTGCTCCGCAACGCCTCTaGCCCGCGTGCACGACGCTC +
Preference number: 4 (lower is better)
Translates to: WSCCFCLTSVSDWLPPSRAPQRL*PACTTL
Trigger: GAGCGTCGTGCACGCGGGCCAGAGGCGTTGCGGAGC...ACGGCTAGGTGGAAGCCAGTCAGAAACTGAAGTCAGACAGAAACAACAACTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538562.5
CDS-3UTR TCA 90 bp TGCAGGGTAGGCCAGGCAGTGGAGGAGAAATTGACACCAACTTCCCTGAGAGCTCGTCTGGGCACCAGGTaGACCGGTTTAGCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: CRVGQAVEEKLTPTSLRARLGTR*TGLALF
Trigger: GAACAGAGCTAAACCGGTTCACCTGGTGCCCAGACG...AGCTCTCAGGGAAGTTGGTGTCAATTTCTCCTCCACTGCCTGGCCTACCCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp TACCCATCTGCACAAAATCTTTGGGAGTGCAGGGTAGGCCAGGCAGTGGAGGAGCGTCTGGGCACCAGGTaGACCGGTTTAGCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: YPSAQNLWECRVGQAVEERLGTR*TGLALF
Trigger: GAACAGAGCTAAACCGGTTCACCTGGTGCCCAGACG...CTCCTCCACTGCCTGGCCTACCCTGCACTCCCAAAGATTTTGTGCAGATGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp AGTGCACCCTTGCCTAGCTCTGCGAACCCCTCAGTTATGTCTCTTGGCCCAAGATCGAGGCCACCTGGTTaGCTTTTGCCTTGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: SAPLPSSANPSVMSLGPRSRPPG*LLPWSR
Trigger: CCGACTCCAAGGCAAAAGTCAACCAGGTGGCCTCGA...TCTTGGGCCAAGAGACATAACTGAGGGGTTCGCAGAGCTAGGCAAGGGTGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp TGGCCCTTTCCTAGTGCACCCTTGCCTAGCTCTGCGAACCCCTCAGTTATGTCTCTTCTGGCCCAGCTGTaGTCCCTAGGCAGGATAGGA +
Preference number: 4 (lower is better)
Translates to: WPFPSAPLPSSANPSVMSLLAQL*SLGRIG
Trigger: TCCTATCCTGCCTAGGGATCACAGCTGGGCCAGAAG...AGACATAACTGAGGGGTTCGCAGAGCTAGGCAAGGGTGCACTAGGAAAGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313640.11
CDS-3UTR CCA 90 bp AAATGGTGGAACTTTGGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTTTTATTCGCCCAGAAGGGTCCTaGGGATCCCGGGTCGGGCGG +
Preference number: 4 (lower is better)
Translates to: KWWNFGISCPVTCESGFIRPEGS*GSRVGR
Trigger: CCGCCCGACCCGGGATCCCCAGGACCCTTCTGGGCG...AATAAAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAAAGTTCCACCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp TACCCATCTGCACAAAATCTTTGGGAGTGCAGGGTAGGCCAGGCAGTGGAGGAGTCCACTTCTCCAGGTTaGCCAGCTCCTGCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: YPSAQNLWECRVGQAVEESTSPG*PAPAPQ
Trigger: TTGCGGAGCAGGAGCTGGCCAACCTGGAGAAGTGGA...CTCCTCCACTGCCTGGCCTACCCTGCACTCCCAAAGATTTTGTGCAGATGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp AGTGCACCCTTGCCTAGCTCTGCGAACCCCTCAGTTATGTCTCTTGGCCCAAGATCCACTTCTCCAGGTTaGCCAGCTCCTGCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: SAPLPSSANPSVMSLGPRSTSPG*PAPAPQ
Trigger: TTGCGGAGCAGGAGCTGGCCAACCTGGAGAAGTGGA...TCTTGGGCCAAGAGACATAACTGAGGGGTTCGCAGAGCTAGGCAAGGGTGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR CAA 72 bp CCCCACCCACCAATGTGGCCCTTTCCTAGTGCACCCTaGCCTAGCTCTGCGAACCCCTCAGTTATGTCTCTT +
Preference number: 4 (lower is better)
Translates to: PHPPMWPFPSAP*PSSANPSVMSL
Trigger: AAGAGACATAACTGAGGGGTTCGCAGAGCTAGGCAAGGGTGCACTAGGAAAGGGCCACATTGGTGGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp TACCCATCTGCACAAAATCTTTGGGAGTGCAGGGTAGGCCAGGCAGTGGAGGAGGAAGCCAGTCACTCCTaGCTGCACGGTCAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: YPSAQNLWECRVGQAVEEEASHS*LHGQVC
Trigger: ACACACTTGACCGTGCAGTCAGGAGTGACTGGCTTC...CTCCTCCACTGCCTGGCCTACCCTGCACTCCCAAAGATTTTGTGCAGATGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp ACCCACCAATGTGGCCCTTTCCTAGTGCACCCTTGCCTAGCTCTGCGAACCCCTTTACACTCTAGGGTCTaGGAACTGGTTCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: THQCGPFLVHPCLALRTPLHSRV*ELVQGH
Trigger: GTGACCCTGAACCAGTTCTCAGACCCTAGAGTGTAA...AGGGGTTCGCAGAGCTAGGCAAGGGTGCACTAGGAAAGGGCCACATTGGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp TGGAGTTGTTGTTTCTGTCTGACTTCAGTTTCTGACTGGCTTCCACCTAGCCGTAGGTTGGCCAGCTCCTaGTCCGCAACGCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: WSCCFCLTSVSDWLPPSRRLASS*SATPLA
Trigger: GGCCAGAGGCGTTGCGGAGCAGGAGCTGGCCAACCT...ACGGCTAGGTGGAAGCCAGTCAGAAACTGAAGTCAGACAGAAACAACAACTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538562.5
CDS-3UTR CCA 90 bp ATAGAAATGGTGGAACTTTGGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTTTGCACTTGTGCGCCTCTaGCCCGCGTGCACGACGCTC +
Preference number: 4 (lower is better)
Translates to: IEMVELWDFLSSHLRVRFALVRL*PACTTL
Trigger: GAGCGTCGTGCACGCGGGCCAGAGGCGCACAAGTGC...AAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAAAGTTCCACCATTTCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp GAACTACCCATCTGCACAAAATCTTTGGGAGTGCAGGGTAGGCCAGGCAGTGGATGCTATACAATGTGGTaGCTGGGGGACGGTGAGGCG +
Preference number: 4 (lower is better)
Translates to: ELPICTKSLGVQGRPGSGCYTMW*LGDGEA
Trigger: CGCCTCACCGTCCCCCAGCCACCACATTGTATAGCA...TCCACTGCCTGGCCTACCCTGCACTCCCAAAGATTTTGTGCAGATGGGTAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp TTAGTGTCAACAGCACTAACACAGCTTCAGCTGGCGGAGGAGAGGGAAACCAAGTCGAGGCCACCTGGTTaGCTTTTGCCTTGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: LVSTALTQLQLAEERETKSRPPG*LLPWSR
Trigger: CCGACTCCAAGGCAAAAGTCAACCAGGTGGCCTCGA...CTTGGTTTCCCTCTCCTCCGCCAGCTGAAGCTGTGTTAGTGCTGTTGACACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp CGTGGCAGATTAAATGTGAAAAGTAAAATGGTGGGCTCCTTTAGGCAGCAAGTCGGGCTCAGCTCCCCTTaGCGCCCAGAAGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: RGRLNVKSKMVGSFRQQVGLSSP*RPEGSW
Trigger: CCAGGACCCTTCTGGGCGGCAAGGGGAGCTGAGCCC...GACTTGCTGCCTAAAGGAGCCCACCATTTTACTTTTCACATTTAATCTGCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp TTAGTGTCAACAGCACTAACACAGCTTCAGCTGGCGGAGGAGAGGGAAACCAAGTGCTATACAATGTGGTaGCTGGGGGACGGTGAGGCG +
Preference number: 4 (lower is better)
Translates to: LVSTALTQLQLAEERETKCYTMW*LGDGEA
Trigger: CGCCTCACCGTCCCCCAGCCACCACATTGTATAGCA...CTTGGTTTCCCTCTCCTCCGCCAGCTGAAGCTGTGTTAGTGCTGTTGACACTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp TGGAACTACCCATCTGCACAAAATCTTTGGGAGTGCAGGGTAGGCCAGGCAGTGCCACAAACAGCACTTTaGCAGGCACTTCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: WNYPSAQNLWECRVGQAVPQTAL*QALLSG
Trigger: GCCAGACAGAAGTGCCTGTCAAAGTGCTGTTTGTGG...CACTGCCTGGCCTACCCTGCACTCCCAAAGATTTTGTGCAGATGGGTAGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp TGGAGTTGTTGTTTCTGTCTGACTTCAGTTTCTGACTGGCTTCCACCTAGCCGTAGGGCCCTTAGGGGCTaGCTCCAAACCCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: WSCCFCLTSVSDWLPPSRRALRG*LQTLSL
Trigger: CAGAGAGAGGGTTTGGAGGCAGCCCCTAAGGGCCCT...ACGGCTAGGTGGAAGCCAGTCAGAAACTGAAGTCAGACAGAAACAACAACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538562.5
CDS-3UTR GCA 90 bp TGGCCCTTTCCTAGTGCACCCTTGCCTAGCTCTGCGAACCCCTCAGTTATGTCTAGGTTGGCCAGCTCCTaGTCCGCAATTCTTTGTATC +
Preference number: 4 (lower is better)
Translates to: WPFPSAPLPSSANPSVMSRLASS*SAILCI
Trigger: GATACAAAGAATTGCGGAGCAGGAGCTGGCCAACCT...AGACATAACTGAGGGGTTCGCAGAGCTAGGCAAGGGTGCACTAGGAAAGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp TTAGTGTCAACAGCACTAACACAGCTTCAGCTGGCGGAGGAGAGGGAAACCAAGTTCCTAGTGCACCCTTaGCTAGCTCTGCGAACCCCT +
Preference number: 4 (lower is better)
Translates to: LVSTALTQLQLAEERETKFLVHP*LALRTP
Trigger: AGGGGTTCGCAGAGCTAGGCAAGGGTGCACTAGGAA...CTTGGTTTCCCTCTCCTCCGCCAGCTGAAGCTGTGTTAGTGCTGTTGACACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp GCAGGTGTAGGGCCGAAATGGCTGCACACCACCACACTAAAATGTCTGCTACAGCAAAATCTTTGGGAGTaGAGGGTAGGCCAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: AGVGPKWLHTTTLKCLLQQNLWE*RVGQAV
Trigger: CACTGCCTGGCCTACCCTGCACTCCCAAAGATTTTG...CTGTAGCAGACATTTTAGTGTGGTGGTGTGCAGCCATTTCGGCCCTACACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp GAACTACCCATCTGCACAAAATCTTTGGGAGTGCAGGGTAGGCCAGGCAGTGGACAAAATCTTTGGGAGTaGAGGGTAGGCCAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: ELPICTKSLGVQGRPGSGQNLWE*RVGQAV
Trigger: CACTGCCTGGCCTACCCTGCACTCCCAAAGATTTTG...TCCACTGCCTGGCCTACCCTGCACTCCCAAAGATTTTGTGCAGATGGGTAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp AGTGCACCCTTGCCTAGCTCTGCGAACCCCTCAGTTATGTCTCTTGGCCCAAGAACTTCAGTTTCTGACTaGCTTCCACCTAGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: SAPLPSSANPSVMSLGPRTSVSD*LPPSRL
Trigger: CAGACGGCTAGGTGGAAGCCAGTCAGAAACTGAAGT...TCTTGGGCCAAGAGACATAACTGAGGGGTTCGCAGAGCTAGGCAAGGGTGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp TACCCATCTGCACAAAATCTTTGGGAGTGCAGGGTAGGCCAGGCAGTGGAGGAGTTTTGCTATACAATGTaGTGGCTGGGGGACGGTGAG +
Preference number: 4 (lower is better)
Translates to: YPSAQNLWECRVGQAVEEFCYTM*WLGDGE
Trigger: CTCACCGTCCCCCAGCCACCACATTGTATAGCAAAA...CTCCTCCACTGCCTGGCCTACCCTGCACTCCCAAAGATTTTGTGCAGATGGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp TGGCCCTTTCCTAGTGCACCCTTGCCTAGCTCTGCGAACCCCTCAGTTATGTCTATTTCCAACACAGGCTaGGGGATTGAGTTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: WPFPSAPLPSSANPSVMSISNTG*GIEFPP
Trigger: TGGGGGAAACTCAATCCCCCAGCCTGTGTTGGAAAT...AGACATAACTGAGGGGTTCGCAGAGCTAGGCAAGGGTGCACTAGGAAAGGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR CAA 72 bp TGGGAGTGCAGGGTAGGCCAGGCAGTGGAGGAGAAATaGACACCAACTTCCCTGAGAGCTTCCAAAGTAAGA +
Preference number: 4 (lower is better)
Translates to: WECRVGQAVEEK*TPTSLRASKVR
Trigger: TCTTACTTTGGAAGCTCTCAGGGAAGTTGGTGTCAATTTCTCCTCCACTGCCTGGCCTACCCTGCACTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp TGGAGTTGTTGTTTCTGTCTGACTTCAGTTTCTGACTGGCTTCCACCTAGCCGTCGTCTGGGCACCAGGTaGACCGGTTTAGCTCTGTTC +
Preference number: 4 (lower is better)
Translates to: WSCCFCLTSVSDWLPPSRRLGTR*TGLALF
Trigger: GAACAGAGCTAAACCGGTTCACCTGGTGCCCAGACG...ACGGCTAGGTGGAAGCCAGTCAGAAACTGAAGTCAGACAGAAACAACAACTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538562.5
CDS-3UTR TCA 90 bp TGGGAGTGCAGGGTAGGCCAGGCAGTGGAGGAGAAATTGACACCAACTTCCCTGCCAAACATGCATAAATaGGGACAAGGAGAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: WECRVGQAVEEKLTPTSLPNMHK*GQGEAS
Trigger: ACTGGCTTCTCCTTGTCCTCATTTATGCATGTTTGG...CAGGGAAGTTGGTGTCAATTTCTCCTCCACTGCCTGGCCTACCCTGCACTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp TGCAGGGTAGGCCAGGCAGTGGAGGAGAAATTGACACCAACTTCCCTGAGAGCTCCTGAAAGCATCAAGTaGCTCCCTCTTTTTCTACCC +
Preference number: 4 (lower is better)
Translates to: CRVGQAVEEKLTPTSLRAPESIK*LPLFLP
Trigger: GGGTAGAAAAAGAGGGAGTCACTTGATGCTTTCAGG...AGCTCTCAGGGAAGTTGGTGTCAATTTCTCCTCCACTGCCTGGCCTACCCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp TGGAGTTGTTGTTTCTGTCTGACTTCAGTTTCTGACTGGCTTCCACCTAGCCGTTATTGCGGGTGTTCATaGTTCACAGCCCGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: WSCCFCLTSVSDWLPPSRYCGCS*FTARGS
Trigger: GGACCCGCGGGCTGTGAACCATGAACACCCGCAATA...ACGGCTAGGTGGAAGCCAGTCAGAAACTGAAGTCAGACAGAAACAACAACTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538562.5
CDS-3UTR CCA 90 bp GCTTCTCTCCTGGTTACCTCTGCCTACATAGATATTTGGTTAAGCAAGATGTTTGCACTTGTGCGCCTCTaGCCCGCGTGCACGACGCTC +
Preference number: 4 (lower is better)
Translates to: ASLLVTSAYIDIWLSKMFALVRL*PACTTL
Trigger: GAGCGTCGTGCACGCGGGCCAGAGGCGCACAAGTGC...AAACATCTTGCTTAACCAAATATCTATGTAGGCAGAGGTAACCAGGAGAGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp TGGAGTTGTTGTTTCTGTCTGACTTCAGTTTCTGACTGGCTTCCACCTAGCCGTTCCACTTCTCCAGGTTaGCCAGCTCCTGCTCCGCAA +
Preference number: 4 (lower is better)
Translates to: WSCCFCLTSVSDWLPPSRSTSPG*PAPAPQ
Trigger: TTGCGGAGCAGGAGCTGGCCAACCTGGAGAAGTGGA...ACGGCTAGGTGGAAGCCAGTCAGAAACTGAAGTCAGACAGAAACAACAACTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538562.5
CDS-3UTR CCA 90 bp TGGAGTTGTTGTTTCTGTCTGACTTCAGTTTCTGACTGGCTTCCACCTAGCCGTTTCCACCTAGCCGTCTaGGCACCAGGTGAACCGGTT +
Preference number: 4 (lower is better)
Translates to: WSCCFCLTSVSDWLPPSRFHLAV*APGEPV
Trigger: AACCGGTTCACCTGGTGCCCAGACGGCTAGGTGGAA...ACGGCTAGGTGGAAGCCAGTCAGAAACTGAAGTCAGACAGAAACAACAACTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538562.5
CDS-3UTR CCA 90 bp TGGAACTACCCATCTGCACAAAATCTTTGGGAGTGCAGGGTAGGCCAGGCAGTGCTAGGGTCTGAGAACTaGTTCAGGGTCACAGAAGTG +
Preference number: 4 (lower is better)
Translates to: WNYPSAQNLWECRVGQAVLGSEN*FRVTEV
Trigger: CACTTCTGTGACCCTGAACCAGTTCTCAGACCCTAG...CACTGCCTGGCCTACCCTGCACTCCCAAAGATTTTGTGCAGATGGGTAGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp AAGCATCCCTTTTTCCTACGTCAACTCCTGGTTGCATGCTGGAAAATGCAGCAAATACAATGTGGTGGCTaGGGGACGGTGAGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: KHPFFLRQLLVACWKMQQIQCGG*GTVRRR
Trigger: CCTCCGCCTCACCGTCCCCCAGCCACCACATTGTAT...TTGCTGCATTTTCCAGCATGCAACCAGGAGTTGACGTAGGAAAAAGGGATGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp TGGAACTACCCATCTGCACAAAATCTTTGGGAGTGCAGGGTAGGCCAGGCAGTGCTCCTGGTTGCATGCTaGAAAATGCAGCAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: WNYPSAQNLWECRVGQAVLLVAC*KMQQVR
Trigger: CCTCACTTGCTGCATTTTCCAGCATGCAACCAGGAG...CACTGCCTGGCCTACCCTGCACTCCCAAAGATTTTGTGCAGATGGGTAGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp TGGGAGTGCAGGGTAGGCCAGGCAGTGGAGGAGAAATTGACACCAACTTCCCTGTCAGGGTCACAGAAGTaGATAAGAAAGCCAACTGAA +
Preference number: 4 (lower is better)
Translates to: WECRVGQAVEEKLTPTSLSGSQK*IRKPTE
Trigger: TTCAGTTGGCTTTCTTATTCACTTCTGTGACCCTGA...CAGGGAAGTTGGTGTCAATTTCTCCTCCACTGCCTGGCCTACCCTGCACTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp AGTGTCAACAGCACTAACACAGCTTCAGCTGGCGGAGGAGAGGGAAACCAAGAAAGGGGACAGAGGGATTaGGCTAGATTACACAGCGTA +
Preference number: 4 (lower is better)
Translates to: SVNSTNTASAGGGEGNQERGQRD*ARLHSV
Trigger: TACGCTGTGTAATCTAGCTCAATCCCTCTGTCCCCT...TTCTTGGTTTCCCTCTCCTCCGCCAGCTGAAGCTGTGTTAGTGCTGTTGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp TGGCCCTTTCCTAGTGCACCCTTGCCTAGCTCTGCGAACCCCTCAGTTATGTCTTCCAGAGAAACTTCCTaGCACCATCTGTTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: WPFPSAPLPSSANPSVMSSRETS*HHLFSV
Trigger: AACAGAGAACAGATGGTGTCAGGAAGTTTCTCTGGA...AGACATAACTGAGGGGTTCGCAGAGCTAGGCAAGGGTGCACTAGGAAAGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp AGTGCACCCTTGCCTAGCTCTGCGAACCCCTCAGTTATGTCTCTTGGCCCAAGAAGTTCACCACTCTATTaGGGGTGTTCATGGTTCACA +
Preference number: 4 (lower is better)
Translates to: SAPLPSSANPSVMSLGPRSSPLY*GCSWFT
Trigger: TGTGAACCATGAACACCCGCAATAGAGTGGTGAACT...TCTTGGGCCAAGAGACATAACTGAGGGGTTCGCAGAGCTAGGCAAGGGTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp AGTGTCAACAGCACTAACACAGCTTCAGCTGGCGGAGGAGAGGGAAACCAAGAAAGGTTGGCCAGCTCCTaGTCCGCAATTCTTTGTATC +
Preference number: 4 (lower is better)
Translates to: SVNSTNTASAGGGEGNQERLASS*SAILCI
Trigger: GATACAAAGAATTGCGGAGCAGGAGCTGGCCAACCT...TTCTTGGTTTCCCTCTCCTCCGCCAGCTGAAGCTGTGTTAGTGCTGTTGACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp AAGCATCCCTTTTTCCTACGTCAACTCCTGGTTGCATGCTGGAAAATGCAGCAATATTGCGGGTGTTCATaGTTCACAGCCCGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: KHPFFLRQLLVACWKMQQYCGCS*FTARGS
Trigger: GGACCCGCGGGCTGTGAACCATGAACACCCGCAATA...TTGCTGCATTTTCCAGCATGCAACCAGGAGTTGACGTAGGAAAAAGGGATGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp TACCCATCTGCACAAAATCTTTGGGAGTGCAGGGTAGGCCAGGCAGTGGAGGAGGCACGGTCAAGTGTGTaGGCAGTTGAAATTAAGGTA +
Preference number: 4 (lower is better)
Translates to: YPSAQNLWECRVGQAVEEARSSV*AVEIKV
Trigger: TACCTTAATTTCAACTGCCCACACACTTGACCGTGC...CTCCTCCACTGCCTGGCCTACCCTGCACTCCCAAAGATTTTGTGCAGATGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp TTAGTGTCAACAGCACTAACACAGCTTCAGCTGGCGGAGGAGAGGGAAACCAAGTCTGCACAAAATCTTTaGGAGTGCAGGGTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LVSTALTQLQLAEERETKSAQNL*ECRVGQ
Trigger: CTGGCCTACCCTGCACTCCCAAAGATTTTGTGCAGA...CTTGGTTTCCCTCTCCTCCGCCAGCTGAAGCTGTGTTAGTGCTGTTGACACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp TGCAGGGTAGGCCAGGCAGTGGAGGAGAAATTGACACCAACTTCCCTGAGAGCTGCGGTTTTGTATTGCTaGTGCTCTCTAAATGCTTCT +
Preference number: 4 (lower is better)
Translates to: CRVGQAVEEKLTPTSLRAAVLYC*CSLNAS
Trigger: AGAAGCATTTAGAGAGCATCAGCAATACAAAACCGC...AGCTCTCAGGGAAGTTGGTGTCAATTTCTCCTCCACTGCCTGGCCTACCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp GTAAAATGGTGGGCTCCTTTAGGCAGCAAGTCTTGCTTCTCTCCTGGTTACCTCAGGGGACAGAGGGATTaGGCTAGATTACACAGCGTA +
Preference number: 4 (lower is better)
Translates to: VKWWAPLGSKSCFSPGYLRGQRD*ARLHSV
Trigger: TACGCTGTGTAATCTAGCTCAATCCCTCTGTCCCCT...GAGGTAACCAGGAGAGAAGCAAGACTTGCTGCCTAAAGGAGCCCACCATTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp TACCCATCTGCACAAAATCTTTGGGAGTGCAGGGTAGGCCAGGCAGTGGAGGAGCCCCATATAAGGCAATaGCAAGGATTTCAAATGGAC +
Preference number: 4 (lower is better)
Translates to: YPSAQNLWECRVGQAVEEPHIRQ*QGFQMD
Trigger: GTCCATTTGAAATCCTTGTCATTGCCTTATATGGGG...CTCCTCCACTGCCTGGCCTACCCTGCACTCCCAAAGATTTTGTGCAGATGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp GTAAAATGGTGGGCTCCTTTAGGCAGCAAGTCTTGCTTCTCTCCTGGTTACCTCGGAAAATGCAGCAAGTaGGGCACACCAAGCATAGAC +
Preference number: 4 (lower is better)
Translates to: VKWWAPLGSKSCFSPGYLGKCSK*GTPSID
Trigger: GTCTATGCTTGGTGTGCCTCACTTGCTGCATTTTCC...GAGGTAACCAGGAGAGAAGCAAGACTTGCTGCCTAAAGGAGCCCACCATTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp TTAGTGTCAACAGCACTAACACAGCTTCAGCTGGCGGAGGAGAGGGAAACCAAGTCCTGTCCAGTCACCTaGGAGTCAGGTTTTATTCCA +
Preference number: 4 (lower is better)
Translates to: LVSTALTQLQLAEERETKSCPVT*ESGFIP
Trigger: TGGAATAAAACCTGACTCGCAGGTGACTGGACAGGA...CTTGGTTTCCCTCTCCTCCGCCAGCTGAAGCTGTGTTAGTGCTGTTGACACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp AAATGGTGGAACTTTGGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTTTTATTTATTGCGGGTGTTCATaGTTCACAGCCCGCGGGTCC +
Preference number: 4 (lower is better)
Translates to: KWWNFGISCPVTCESGFIYCGCS*FTARGS
Trigger: GGACCCGCGGGCTGTGAACCATGAACACCCGCAATA...AATAAAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAAAGTTCCACCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp GCAGGTGTAGGGCCGAAATGGCTGCACACCACCACACTAAAATGTCTGCTACAGCTCCTGTGTTCAGTCTaGTGGATTTTGGCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: AGVGPKWLHTTTLKCLLQLLCSV*WILALS
Trigger: AGAAAGAGCCAAAATCCACCAGACTGAACACAGGAG...CTGTAGCAGACATTTTAGTGTGGTGGTGTGCAGCCATTTCGGCCCTACACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp TGGAACTACCCATCTGCACAAAATCTTTGGGAGTGCAGGGTAGGCCAGGCAGTGGAAATGGTGGAACTTTaGGATTTCCTGTCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: WNYPSAQNLWECRVGQAVEMVEL*DFLSSH
Trigger: GTGACTGGACAGGAAATCCCAAAGTTCCACCATTTC...CACTGCCTGGCCTACCCTGCACTCCCAAAGATTTTGTGCAGATGGGTAGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp TGCAGGGTAGGCCAGGCAGTGGAGGAGAAATTGACACCAACTTCCCTGAGAGCTCTTCAGCTTCCTTCTTaGTTCTTACAGATTCTTCTC +
Preference number: 4 (lower is better)
Translates to: CRVGQAVEEKLTPTSLRALQLPS*FLQILL
Trigger: GAGAAGAATCTGTAAGAATCAAGAAGGAAGCTGAAG...AGCTCTCAGGGAAGTTGGTGTCAATTTCTCCTCCACTGCCTGGCCTACCCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp GCAGGTGTAGGGCCGAAATGGCTGCACACCACCACACTAAAATGTCTGCTACAGAGAAAAAGCATCTCATaGGGCTTTTCGAGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: AGVGPKWLHTTTLKCLLQRKSIS*GFSRSV
Trigger: AACTGACCTCGAAAAGCCTCATGAGATGCTTTTTCT...CTGTAGCAGACATTTTAGTGTGGTGGTGTGCAGCCATTTCGGCCCTACACCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp GTAAAATGGTGGGCTCCTTTAGGCAGCAAGTCTTGCTTCTCTCCTGGTTACCTCAGGAAGTTTCCATGTTaGGGATTGTGGGCCACAAAC +
Preference number: 4 (lower is better)
Translates to: VKWWAPLGSKSCFSPGYLRKFPC*GLWATN
Trigger: GTTTGTGGCCCACAATCCTCAACATGGAAACTTCCT...GAGGTAACCAGGAGAGAAGCAAGACTTGCTGCCTAAAGGAGCCCACCATTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313640.11
CDS-3UTR GCA 90 bp AGTGCACCCTTGCCTAGCTCTGCGAACCCCTCAGTTATGTCTCTTGGCCCAAGACCGGTTTATATTTGGTaGTATCAAGGTGTATGCACT +
Preference number: 4 (lower is better)
Translates to: SAPLPSSANPSVMSLGPRPVYIW*YQGVCT
Trigger: AGTGCATACACCTTGATAGCACCAAATATAAACCGG...TCTTGGGCCAAGAGACATAACTGAGGGGTTCGCAGAGCTAGGCAAGGGTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp TACCCATCTGCACAAAATCTTTGGGAGTGCAGGGTAGGCCAGGCAGTGGAGGAGATTCTGTGTTCAGTTTaGTCAAGAACTCAGCGGTTT +
Preference number: 4 (lower is better)
Translates to: YPSAQNLWECRVGQAVEEILCSV*SRTQRF
Trigger: AAACCGCTGAGTTCTTGAGCAAACTGAACACAGAAT...CTCCTCCACTGCCTGGCCTACCCTGCACTCCCAAAGATTTTGTGCAGATGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp GCAGGTGTAGGGCCGAAATGGCTGCACACCACCACACTAAAATGTCTGCTACAGATGGAACTACCCATCTaGACAAAATCTTTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: AGVGPKWLHTTTLKCLLQMELPI*TKSLGV
Trigger: CACTCCCAAAGATTTTGTGCAGATGGGTAGTTCCAT...CTGTAGCAGACATTTTAGTGTGGTGGTGTGCAGCCATTTCGGCCCTACACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp AGTGCACCCTTGCCTAGCTCTGCGAACCCCTCAGTTATGTCTCTTGGCCCAAGATCTCCGGTTTATATTTaGTGCTATCAAGGTGTATGC +
Preference number: 4 (lower is better)
Translates to: SAPLPSSANPSVMSLGPRSPVYI*CYQGVC
Trigger: GCATACACCTTGATAGCACCAAATATAAACCGGAGA...TCTTGGGCCAAGAGACATAACTGAGGGGTTCGCAGAGCTAGGCAAGGGTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp CATCCCTTTTTCCTACGTCAACTCCTGGTTGCATGCTGGAAAATGCAGCAAGTGACTTCAGTTTCTGACTaGCTTCCACCTAGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: HPFFLRQLLVACWKMQQVTSVSD*LPPSRL
Trigger: CAGACGGCTAGGTGGAAGCCAGTCAGAAACTGAAGT...CACTTGCTGCATTTTCCAGCATGCAACCAGGAGTTGACGTAGGAAAAAGGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp TGGAGTTGTTGTTTCTGTCTGACTTCAGTTTCTGACTGGCTTCCACCTAGCCGTACTTCAGTTTCTGACTaGCTTCCACCTAGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: WSCCFCLTSVSDWLPPSRTSVSD*LPPSRL
Trigger: CAGACGGCTAGGTGGAAGCCAGTCAGAAACTGAAGT...ACGGCTAGGTGGAAGCCAGTCAGAAACTGAAGTCAGACAGAAACAACAACTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538562.5
CDS-3UTR CCA 90 bp ATAGAAATGGTGGAACTTTGGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTTTTTGCTCGAGGCCACCTaGTTGACTTTTGCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: IEMVELWDFLSSHLRVRFLLEAT*LTFALE
Trigger: CTCCAAGGCAAAAGTCAACCAGGTGGCCTCGAGCAA...AAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAAAGTTCCACCATTTCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp TACCCATCTGCACAAAATCTTTGGGAGTGCAGGGTAGGCCAGGCAGTGGAGGAGCTCAGTTATGTCTCTTaGCCCAAGAATTTCAAAACC +
Preference number: 4 (lower is better)
Translates to: YPSAQNLWECRVGQAVEELSYVS*PKNFKT
Trigger: GGTTTTGAAATTCTTGGGCCAAGAGACATAACTGAG...CTCCTCCACTGCCTGGCCTACCCTGCACTCCCAAAGATTTTGTGCAGATGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp GAAATTGACACCAACTTCCCTGAGAGCTTCCAAAGTAAGAAAGCATCCCTTTTTCCCCACCCACCAATGTaGCCCTTTCCTAGTGCACCC +
Preference number: 4 (lower is better)
Translates to: EIDTNFPESFQSKKASLFPHPPM*PFPSAP
Trigger: GGGTGCACTAGGAAAGGGCCACATTGGTGGGTGGGG...AAAAAGGGATGCTTTCTTACTTTGGAAGCTCTCAGGGAAGTTGGTGTCAATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp AAATGGTGGAACTTTGGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTTTTATTCCACAAACAGCACTTTaGCAGGCACTTCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: KWWNFGISCPVTCESGFIPQTAL*QALLSG
Trigger: GCCAGACAGAAGTGCCTGTCAAAGTGCTGTTTGTGG...AATAAAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAAAGTTCCACCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp GCAGGTGTAGGGCCGAAATGGCTGCACACCACCACACTAAAATGTCTGCTACAGTTCATTTCAACAGAGTaGCTGGTAACACAGAAGATC +
Preference number: 4 (lower is better)
Translates to: AGVGPKWLHTTTLKCLLQFISTE*LVTQKI
Trigger: GATCTTCTGTGTTACCAGTCACTCTGTTGAAATGAA...CTGTAGCAGACATTTTAGTGTGGTGGTGTGCAGCCATTTCGGCCCTACACCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp GCCAACAGTAATGACAGTACTATATTTGATCTATACGGCCTGGAAAAGGGAATTAGGGCCCTTAGGGGCTaGCTCCAAACCCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: ANSNDSTIFDLYGLEKGIRALRG*LQTLSL
Trigger: CAGAGAGAGGGTTTGGAGGCAGCCCCTAAGGGCCCT...AATTCCCTTTTCCAGGCCGTATAGATCAAATATAGTACTGTCATTACTGTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp TGGAACTACCCATCTGCACAAAATCTTTGGGAGTGCAGGGTAGGCCAGGCAGTGTCTCCTCCAGTTTATTaGTCTTCTCTCTCTGAATTG +
Preference number: 4 (lower is better)
Translates to: WNYPSAQNLWECRVGQAVSPPVY*SSLSEL
Trigger: CAATTCAGAGAGAGAAGAGCAATAAACTGGAGGAGA...CACTGCCTGGCCTACCCTGCACTCCCAAAGATTTTGTGCAGATGGGTAGTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp AAGCATCCCTTTTTCCTACGTCAACTCCTGGTTGCATGCTGGAAAATGCAGCAAGCTCTTTCTTGCTCTTaGTGCTGCCGTTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: KHPFFLRQLLVACWKMQQALSCS*CCRFSS
Trigger: GGAACTGAAACGGCAGCAGCAAGAGCAAGAAAGAGC...TTGCTGCATTTTCCAGCATGCAACCAGGAGTTGACGTAGGAAAAAGGGATGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp GTAAAATGGTGGGCTCCTTTAGGCAGCAAGTCTTGCTTCTCTCCTGGTTACCTCCAGCTCCTCCAAACATaGATAAATGAGGACAAGGAG +
Preference number: 4 (lower is better)
Translates to: VKWWAPLGSKSCFSPGYLQLLQT*INEDKE
Trigger: CTCCTTGTCCTCATTTATGCATGTTTGGAGGAGCTG...GAGGTAACCAGGAGAGAAGCAAGACTTGCTGCCTAAAGGAGCCCACCATTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp CATCCCTTTTTCCTACGTCAACTCCTGGTTGCATGCTGGAAAATGCAGCAAGTGCAACTCCTGGTTGCATaGTGGAAAATGCAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: HPFFLRQLLVACWKMQQVQLLVA*WKMQQV
Trigger: CACTTGCTGCATTTTCCAGCATGCAACCAGGAGTTG...CACTTGCTGCATTTTCCAGCATGCAACCAGGAGTTGACGTAGGAAAAAGGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp CATCCCTTTTTCCTACGTCAACTCCTGGTTGCATGCTGGAAAATGCAGCAAGTGACGTCAACTCCTGGTTaGATGCTGGAAAATGCAGCA +
Preference number: 4 (lower is better)
Translates to: HPFFLRQLLVACWKMQQVTSTPG*MLENAA
Trigger: TGCTGCATTTTCCAGCATGCAACCAGGAGTTGACGT...CACTTGCTGCATTTTCCAGCATGCAACCAGGAGTTGACGTAGGAAAAAGGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp CATCCCTTTTTCCTACGTCAACTCCTGGTTGCATGCTGGAAAATGCAGCAAGTGTCCTGTCCAGTCACCTaGGAGTCAGGTTTTATTCCA +
Preference number: 4 (lower is better)
Translates to: HPFFLRQLLVACWKMQQVSCPVT*ESGFIP
Trigger: TGGAATAAAACCTGACTCGCAGGTGACTGGACAGGA...CACTTGCTGCATTTTCCAGCATGCAACCAGGAGTTGACGTAGGAAAAAGGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp CTTTCTGGAGATAAACTGTCCCCCTCTGAAAATCAGGGTAACACTATTAGTAAGTTCCACCTAGCCGTCTaGGCACCAGGTGAACCGGTT +
Preference number: 4 (lower is better)
Translates to: LSGDKLSPSENQGNTISKFHLAV*APGEPV
Trigger: AACCGGTTCACCTGGTGCCCAGACGGCTAGGTGGAA...CTTACTAATAGTGTTACCCTGATTTTCAGAGGGGGACAGTTTATCTCCAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp TGGGAGTGCAGGGTAGGCCAGGCAGTGGAGGAGAAATTGACACCAACTTCCCTGCCAATTGATTCAACGTaGCAGATTAAATGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: WECRVGQAVEEKLTPTSLPIDST*QIKCEK
Trigger: CTTTTCACATTTAATCTGCCACGTTGAATCAATTGG...CAGGGAAGTTGGTGTCAATTTCTCCTCCACTGCCTGGCCTACCCTGCACTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp GCTTCTCTCCTGGTTACCTCTGCCTACATAGATATTTGGTTAAGCAAGATGTTTGAAGCCAGTCACTCCTaGCTGCACGGTCAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: ASLLVTSAYIDIWLSKMFEASHS*LHGQVC
Trigger: ACACACTTGACCGTGCAGTCAGGAGTGACTGGCTTC...AAACATCTTGCTTAACCAAATATCTATGTAGGCAGAGGTAACCAGGAGAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp GTAGCACCCATAGCTCTGATTAACCTGAAAGCATCAAGTGACTCCCTCTTTTTCTTACACTCTAGGGTCTaGGAACTGGTTCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: VAPIALINLKASSDSLFFLHSRV*ELVQGH
Trigger: GTGACCCTGAACCAGTTCTCAGACCCTAGAGTGTAA...GAAAAAGAGGGAGTCACTTGATGCTTTCAGGTTAATCAGAGCTATGGGTGCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp TGGAGTTGTTGTTTCTGTCTGACTTCAGTTTCTGACTGGCTTCCACCTAGCCGTAGTTCACCACTCTATTaGGGGTGTTCATGGTTCACA +
Preference number: 4 (lower is better)
Translates to: WSCCFCLTSVSDWLPPSRSSPLY*GCSWFT
Trigger: TGTGAACCATGAACACCCGCAATAGAGTGGTGAACT...ACGGCTAGGTGGAAGCCAGTCAGAAACTGAAGTCAGACAGAAACAACAACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538562.5
CDS-3UTR GCA 90 bp GTTTATACCCCCACACATATTCTAGATAGTTCTGGTCATGAAGTAAGTCACAATAGGGCCCTTAGGGGCTaGCTCCAAACCCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: VYTPTHILDSSGHEVSHNRALRG*LQTLSL
Trigger: CAGAGAGAGGGTTTGGAGGCAGCCCCTAAGGGCCCT...ATTGTGACTTACTTCATGACCAGAACTATCTAGAATATGTGTGGGGGTATAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp GTTTATACCCCCACACATATTCTAGATAGTTCTGGTCATGAAGTAAGTCACAATAGGTGTATGCACTTGTaGGCCTCTGGCCCGCGTGCA +
Preference number: 4 (lower is better)
Translates to: VYTPTHILDSSGHEVSHNRCMHL*ASGPRA
Trigger: TGCACGCGGGCCAGAGGCGCACAAGTGCATACACCT...ATTGTGACTTACTTCATGACCAGAACTATCTAGAATATGTGTGGGGGTATAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp TTGGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTTTTATTCCAATTGATTCAATGCTATCAAGGTGTATaGACTTGTGCGCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LGFPVQSPASQVLFQLIQCYQGV*TCAPLA
Trigger: GGCCAGAGGCGCACAAGTGCATACACCTTGATAGCA...TTGAATCAATTGGAATAAAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp AGAATATCCACATTATTTACTCCAGAGAAACTTCCTGACACCATCTGTTCTCTGCCAGTCACTCCTGACTaGACGGTCAAGTGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: RISTLFTPEKLPDTICSLPVTPD*TVKCVG
Trigger: GCCCACACACTTGACCGTGCAGTCAGGAGTGACTGG...CAGAGAACAGATGGTGTCAGGAAGTTTCTCTGGAGTAAATAATGTGGATATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp ACCACACTAAAATGTCTGCTACAGCCGCACATTTACAATCAGTTTGGTGATATTTTCCACCTAGCCGTCTaGGCACCAGGTGAACCGGTT +
Preference number: 4 (lower is better)
Translates to: TTLKCLLQPHIYNQFGDIFHLAV*APGEPV
Trigger: AACCGGTTCACCTGGTGCCCAGACGGCTAGGTGGAA...AATATCACCAAACTGATTGTAAATGTGCGGCTGTAGCAGACATTTTAGTGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp TTGGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTTTTATTCCAATTGATTCAATTGCTCGAGGCCACCTaGTTGACTTTTGCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: LGFPVQSPASQVLFQLIQLLEAT*LTFALE
Trigger: CTCCAAGGCAAAAGTCAACCAGGTGGCCTCGAGCAA...TTGAATCAATTGGAATAAAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp GTAGCACCCATAGCTCTGATTAACCTGAAAGCATCAAGTGACTCCCTCTTTTTCTTTTGCTATACAATGTaGTGGCTGGGGGACGGTGAG +
Preference number: 4 (lower is better)
Translates to: VAPIALINLKASSDSLFFFCYTM*WLGDGE
Trigger: CTCACCGTCCCCCAGCCACCACATTGTATAGCAAAA...GAAAAAGAGGGAGTCACTTGATGCTTTCAGGTTAATCAGAGCTATGGGTGCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp GCTTCTCTCCTGGTTACCTCTGCCTACATAGATATTTGGTTAAGCAAGATGTTTGGTGTAGGGCCGAAATaGCTGCACACCACCACACTA +
Preference number: 4 (lower is better)
Translates to: ASLLVTSAYIDIWLSKMFGVGPK*LHTTTL
Trigger: TAGTGTGGTGGTGTGCAGCCATTTCGGCCCTACACC...AAACATCTTGCTTAACCAAATATCTATGTAGGCAGAGGTAACCAGGAGAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp AAATGGTGGAACTTTGGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTTTTATTCTCCTGGTTGCATGCTaGAAAATGCAGCAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: KWWNFGISCPVTCESGFILLVAC*KMQQVR
Trigger: CCTCACTTGCTGCATTTTCCAGCATGCAACCAGGAG...AATAAAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAAAGTTCCACCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp AAGCATCCCTTTTTCCTACGTCAACTCCTGGTTGCATGCTGGAAAATGCAGCAATCCTACGTCAACTCCTaGTTGCATGCTGGAAAATGC +
Preference number: 4 (lower is better)
Translates to: KHPFFLRQLLVACWKMQQSYVNS*LHAGKC
Trigger: GCATTTTCCAGCATGCAACCAGGAGTTGACGTAGGA...TTGCTGCATTTTCCAGCATGCAACCAGGAGTTGACGTAGGAAAAAGGGATGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp AAGCATCCCTTTTTCCTACGTCAACTCCTGGTTGCATGCTGGAAAATGCAGCAAGTTGTTGTTTCTGTCTaGCTTCAGTTTCTGACTGGC +
Preference number: 4 (lower is better)
Translates to: KHPFFLRQLLVACWKMQQVVVSV*LQFLTG
Trigger: GCCAGTCAGAAACTGAAGTCAGACAGAAACAACAAC...TTGCTGCATTTTCCAGCATGCAACCAGGAGTTGACGTAGGAAAAAGGGATGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp AGAGTGACTGGTAACACAGAAGATCTCTTAATGCTGCAAAGTATTATTAGTTGTAGGTGTATGCACTTGTaGGCCTCTGGCCCGCGTGCA +
Preference number: 4 (lower is better)
Translates to: RVTGNTEDLLMLQSIISCRCMHL*ASGPRA
Trigger: TGCACGCGGGCCAGAGGCGCACAAGTGCATACACCT...ACAACTAATAATACTTTGCAGCATTAAGAGATCTTCTGTGTTACCAGTCACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp GTAAAATGGTGGGCTCCTTTAGGCAGCAAGTCTTGCTTCTCTCCTGGTTACCTCAGCGTAGAAAATCAATaGTCTTACACTCTAGGGTCT +
Preference number: 4 (lower is better)
Translates to: VKWWAPLGSKSCFSPGYLSVENQ*SYTLGS
Trigger: AGACCCTAGAGTGTAAGAGCATTGATTTTCTACGCT...GAGGTAACCAGGAGAGAAGCAAGACTTGCTGCCTAAAGGAGCCCACCATTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp ACCACACTAAAATGTCTGCTACAGCCGCACATTTACAATCAGTTTGGTGATATTTTCCTAGTGCACCCTTaGCTAGCTCTGCGAACCCCT +
Preference number: 4 (lower is better)
Translates to: TTLKCLLQPHIYNQFGDIFLVHP*LALRTP
Trigger: AGGGGTTCGCAGAGCTAGGCAAGGGTGCACTAGGAA...AATATCACCAAACTGATTGTAAATGTGCGGCTGTAGCAGACATTTTAGTGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp GTAGCACCCATAGCTCTGATTAACCTGAAAGCATCAAGTGACTCCCTCTTTTTCTTAGGCAGCAAGTCTTaGTTCTCTCCTGGTTACCTC +
Preference number: 4 (lower is better)
Translates to: VAPIALINLKASSDSLFFLGSKS*FSPGYL
Trigger: GAGGTAACCAGGAGAGAAGCAAGACTTGCTGCCTAA...GAAAAAGAGGGAGTCACTTGATGCTTTCAGGTTAATCAGAGCTATGGGTGCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp CGTGGCAGATTAAATGTGAAAAGTAAAATGGTGGGCTCCTTTAGGCAGCAAGTCTTAGGCAGCAAGTCTTaGTTCTCTCCTGGTTACCTC +
Preference number: 4 (lower is better)
Translates to: RGRLNVKSKMVGSFRQQVLGSKS*FSPGYL
Trigger: GAGGTAACCAGGAGAGAAGCAAGACTTGCTGCCTAA...GACTTGCTGCCTAAAGGAGCCCACCATTTTACTTTTCACATTTAATCTGCCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp AAGCATCCCTTTTTCCTACGTCAACTCCTGGTTGCATGCTGGAAAATGCAGCAACTGTGTTCAGTCTGGTaGATTTTGGCTCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: KHPFFLRQLLVACWKMQQLCSVW*ILALSC
Trigger: GCAAGAAAGAGCCAAAATCCACCAGACTGAACACAG...TTGCTGCATTTTCCAGCATGCAACCAGGAGTTGACGTAGGAAAAAGGGATGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp AAGCATCCCTTTTTCCTACGTCAACTCCTGGTTGCATGCTGGAAAATGCAGCAACTCCTGTGTTCAGTCTaGTGGATTTTGGCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: KHPFFLRQLLVACWKMQQLLCSV*WILALS
Trigger: AGAAAGAGCCAAAATCCACCAGACTGAACACAGGAG...TTGCTGCATTTTCCAGCATGCAACCAGGAGTTGACGTAGGAAAAAGGGATGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp AGAGTGACTGGTAACACAGAAGATCTCTTAATGCTGCAAAGTATTATTAGTTGTCCCCACCCACCAATGTaGCCCTTTCCTAGTGCACCC +
Preference number: 4 (lower is better)
Translates to: RVTGNTEDLLMLQSIISCPHPPM*PFPSAP
Trigger: GGGTGCACTAGGAAAGGGCCACATTGGTGGGTGGGG...ACAACTAATAATACTTTGCAGCATTAAGAGATCTTCTGTGTTACCAGTCACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp GTAGCACCCATAGCTCTGATTAACCTGAAAGCATCAAGTGACTCCCTCTTTTTCTCCTACGTCAACTCCTaGTTGCATGCTGGAAAATGC +
Preference number: 4 (lower is better)
Translates to: VAPIALINLKASSDSLFFSYVNS*LHAGKC
Trigger: GCATTTTCCAGCATGCAACCAGGAGTTGACGTAGGA...GAAAAAGAGGGAGTCACTTGATGCTTTCAGGTTAATCAGAGCTATGGGTGCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp TTGGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTTTTATTCCAATTGATTCAATCTGCACAAAATCTTTaGGAGTGCAGGGTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LGFPVQSPASQVLFQLIQSAQNL*ECRVGQ
Trigger: CTGGCCTACCCTGCACTCCCAAAGATTTTGTGCAGA...TTGAATCAATTGGAATAAAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp TGGAGTTGTTGTTTCTGTCTGACTTCAGTTTCTGACTGGCTTCCACCTAGCCGTCTTCAGCTTCCTTCTTaGTTCTTACAGATTCTTCTC +
Preference number: 4 (lower is better)
Translates to: WSCCFCLTSVSDWLPPSRLQLPS*FLQILL
Trigger: GAGAAGAATCTGTAAGAATCAAGAAGGAAGCTGAAG...ACGGCTAGGTGGAAGCCAGTCAGAAACTGAAGTCAGACAGAAACAACAACTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538562.5
CDS-3UTR TCA 90 bp CGTGGCAGATTAAATGTGAAAAGTAAAATGGTGGGCTCCTTTAGGCAGCAAGTCCCAAACATGCATAAATaGGGACAAGGAGAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: RGRLNVKSKMVGSFRQQVPNMHK*GQGEAS
Trigger: ACTGGCTTCTCCTTGTCCTCATTTATGCATGTTTGG...GACTTGCTGCCTAAAGGAGCCCACCATTTTACTTTTCACATTTAATCTGCCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp CGTGGCAGATTAAATGTGAAAAGTAAAATGGTGGGCTCCTTTAGGCAGCAAGTCAGTTCACCACTCTATTaGGGGTGTTCATGGTTCACA +
Preference number: 4 (lower is better)
Translates to: RGRLNVKSKMVGSFRQQVSSPLY*GCSWFT
Trigger: TGTGAACCATGAACACCCGCAATAGAGTGGTGAACT...GACTTGCTGCCTAAAGGAGCCCACCATTTTACTTTTCACATTTAATCTGCCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp TGGAGTTGTTGTTTCTGTCTGACTTCAGTTTCTGACTGGCTTCCACCTAGCCGTTCTCCTCCAGTTTATTaGTCTTCTCTCTCTGAATTG +
Preference number: 4 (lower is better)
Translates to: WSCCFCLTSVSDWLPPSRSPPVY*SSLSEL
Trigger: CAATTCAGAGAGAGAAGAGCAATAAACTGGAGGAGA...ACGGCTAGGTGGAAGCCAGTCAGAAACTGAAGTCAGACAGAAACAACAACTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538562.5
CDS-3UTR GCA 90 bp CTTTCTGGAGATAAACTGTCCCCCTCTGAAAATCAGGGTAACACTATTAGTAAGCACCTGGTTGACTTTTaGCTTGGAGTCGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LSGDKLSPSENQGNTISKHLVDF*LGVGPE
Trigger: TTCTGGACCGACTCCAAGGCAAAAGTCAACCAGGTG...CTTACTAATAGTGTTACCCTGATTTTCAGAGGGGGACAGTTTATCTCCAGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp AGAGTGACTGGTAACACAGAAGATCTCTTAATGCTGCAAAGTATTATTAGTTGTCCAGTCACTCCTGACTaGACGGTCAAGTGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: RVTGNTEDLLMLQSIISCPVTPD*TVKCVG
Trigger: GCCCACACACTTGACCGTGCAGTCAGGAGTGACTGG...ACAACTAATAATACTTTGCAGCATTAAGAGATCTTCTGTGTTACCAGTCACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp TGGAGTTGTTGTTTCTGTCTGACTTCAGTTTCTGACTGGCTTCCACCTAGCCGTTTAGATTGCATCAGCTaGAGTTGTTGTTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: WSCCFCLTSVSDWLPPSRLDCIS*SCCFCL
Trigger: CAGACAGAAACAACAACTCCAGCTGATGCAATCTAA...ACGGCTAGGTGGAAGCCAGTCAGAAACTGAAGTCAGACAGAAACAACAACTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538562.5
CDS-3UTR CCA 90 bp GTAGCACCCATAGCTCTGATTAACCTGAAAGCATCAAGTGACTCCCTCTTTTTCCTGTGTTCAGTCTGGTaGATTTTGGCTCTTTCTTGC +
Preference number: 4 (lower is better)
Translates to: VAPIALINLKASSDSLFFLCSVW*ILALSC
Trigger: GCAAGAAAGAGCCAAAATCCACCAGACTGAACACAG...GAAAAAGAGGGAGTCACTTGATGCTTTCAGGTTAATCAGAGCTATGGGTGCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp GCTTCTCTCCTGGTTACCTCTGCCTACATAGATATTTGGTTAAGCAAGATGTTTCTAGGGTCTGAGAACTaGTTCAGGGTCACAGAAGTG +
Preference number: 4 (lower is better)
Translates to: ASLLVTSAYIDIWLSKMFLGSEN*FRVTEV
Trigger: CACTTCTGTGACCCTGAACCAGTTCTCAGACCCTAG...AAACATCTTGCTTAACCAAATATCTATGTAGGCAGAGGTAACCAGGAGAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR CAA 72 bp GGGGACATTAAAATTAAGCATAGAAATGGTGGAACTTaGGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: GDIKIKHRNGGT*GFPVQSPASQV
Trigger: AACCTGACTCGCAGGTGACTGGACAGGAAATCCCAAAGTTCCACCATTTCTATGCTTAATTTTAATGTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp CGTGGCAGATTAAATGTGAAAAGTAAAATGGTGGGCTCCTTTAGGCAGCAAGTCGCGGTTTTGTATTGCTaGTGCTCTCTAAATGCTTCT +
Preference number: 4 (lower is better)
Translates to: RGRLNVKSKMVGSFRQQVAVLYC*CSLNAS
Trigger: AGAAGCATTTAGAGAGCATCAGCAATACAAAACCGC...GACTTGCTGCCTAAAGGAGCCCACCATTTTACTTTTCACATTTAATCTGCCACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp AAATGGTGGAACTTTGGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTTTTATTAGAAAAAGCATCTCATaGGGCTTTTCGAGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: KWWNFGISCPVTCESGFIRKSIS*GFSRSV
Trigger: AACTGACCTCGAAAAGCCTCATGAGATGCTTTTTCT...AATAAAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAAAGTTCCACCATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp GCCAACAGTAATGACAGTACTATATTTGATCTATACGGCCTGGAAAAGGGAATTGGAAAATGCAGCAAGTaGGGCACACCAAGCATAGAC +
Preference number: 4 (lower is better)
Translates to: ANSNDSTIFDLYGLEKGIGKCSK*GTPSID
Trigger: GTCTATGCTTGGTGTGCCTCACTTGCTGCATTTTCC...AATTCCCTTTTCCAGGCCGTATAGATCAAATATAGTACTGTCATTACTGTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp GCCAACAGTAATGACAGTACTATATTTGATCTATACGGCCTGGAAAAGGGAATTGCTCTTTCTTGCTCTTaGTGCTGCCGTTTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: ANSNDSTIFDLYGLEKGIALSCS*CCRFSS
Trigger: GGAACTGAAACGGCAGCAGCAAGAGCAAGAAAGAGC...AATTCCCTTTTCCAGGCCGTATAGATCAAATATAGTACTGTCATTACTGTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp CTTTCTGGAGATAAACTGTCCCCCTCTGAAAATCAGGGTAACACTATTAGTAAGACGTCAACTCCTGGTTaGATGCTGGAAAATGCAGCA +
Preference number: 4 (lower is better)
Translates to: LSGDKLSPSENQGNTISKTSTPG*MLENAA
Trigger: TGCTGCATTTTCCAGCATGCAACCAGGAGTTGACGT...CTTACTAATAGTGTTACCCTGATTTTCAGAGGGGGACAGTTTATCTCCAGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp ATAGAAATGGTGGAACTTTGGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTTTTCTCCTGGTTACCTCTaGCTACATAGATATTTGGTT +
Preference number: 4 (lower is better)
Translates to: IEMVELWDFLSSHLRVRFSPGYL*LHRYLV
Trigger: AACCAAATATCTATGTAGGCAGAGGTAACCAGGAGA...AAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAAAGTTCCACCATTTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp AGAGTGACTGGTAACACAGAAGATCTCTTAATGCTGCAAAGTATTATTAGTTGTGGTGTAGGGCCGAAATaGCTGCACACCACCACACTA +
Preference number: 4 (lower is better)
Translates to: RVTGNTEDLLMLQSIISCGVGPK*LHTTTL
Trigger: TAGTGTGGTGGTGTGCAGCCATTTCGGCCCTACACC...ACAACTAATAATACTTTGCAGCATTAAGAGATCTTCTGTGTTACCAGTCACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp CTTTCTGGAGATAAACTGTCCCCCTCTGAAAATCAGGGTAACACTATTAGTAAGGTTGTTGTTTCTGTCTaGCTTCAGTTTCTGACTGGC +
Preference number: 4 (lower is better)
Translates to: LSGDKLSPSENQGNTISKVVVSV*LQFLTG
Trigger: GCCAGTCAGAAACTGAAGTCAGACAGAAACAACAAC...CTTACTAATAGTGTTACCCTGATTTTCAGAGGGGGACAGTTTATCTCCAGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp CGTGGCAGATTAAATGTGAAAAGTAAAATGGTGGGCTCCTTTAGGCAGCAAGTCCTTCAGCTTCCTTCTTaGTTCTTACAGATTCTTCTC +
Preference number: 4 (lower is better)
Translates to: RGRLNVKSKMVGSFRQQVLQLPS*FLQILL
Trigger: GAGAAGAATCTGTAAGAATCAAGAAGGAAGCTGAAG...GACTTGCTGCCTAAAGGAGCCCACCATTTTACTTTTCACATTTAATCTGCCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp ACCACACTAAAATGTCTGCTACAGCCGCACATTTACAATCAGTTTGGTGATATTCCTGAAAGCATCAAGTaGCTCCCTCTTTTTCTACCC +
Preference number: 4 (lower is better)
Translates to: TTLKCLLQPHIYNQFGDIPESIK*LPLFLP
Trigger: GGGTAGAAAAAGAGGGAGTCACTTGATGCTTTCAGG...AATATCACCAAACTGATTGTAAATGTGCGGCTGTAGCAGACATTTTAGTGTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp AGAGTGACTGGTAACACAGAAGATCTCTTAATGCTGCAAAGTATTATTAGTTGTTGCTATCAAGGTGTATaGACTTGTGCGCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: RVTGNTEDLLMLQSIISCCYQGV*TCAPLA
Trigger: GGCCAGAGGCGCACAAGTGCATACACCTTGATAGCA...ACAACTAATAATACTTTGCAGCATTAAGAGATCTTCTGTGTTACCAGTCACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp GCTTCTCTCCTGGTTACCTCTGCCTACATAGATATTTGGTTAAGCAAGATGTTTTCTTGCTCTTGCTGCTaGCGTTTCAGTTCCAGTAAT +
Preference number: 4 (lower is better)
Translates to: ASLLVTSAYIDIWLSKMFSCSCC*RFSSSN
Trigger: ATTACTGGAACTGAAACGGCAGCAGCAAGAGCAAGA...AAACATCTTGCTTAACCAAATATCTATGTAGGCAGAGGTAACCAGGAGAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp GAAATTGACACCAACTTCCCTGAGAGCTTCCAAAGTAAGAAAGCATCCCTTTTTATTTTGGCTCTTTCTTaGTCTTGCTGCTGCCGTTTC +
Preference number: 4 (lower is better)
Translates to: EIDTNFPESFQSKKASLFILALS*SCCCRF
Trigger: GAAACGGCAGCAGCAAGAGCAAGAAAGAGCCAAAAT...AAAAAGGGATGCTTTCTTACTTTGGAAGCTCTCAGGGAAGTTGGTGTCAATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp ATTGAGTTTCCCCCATATAAGGCAATGACAAGGATTTCAAATGGACCAAACATTCACCTGGTTGACTTTTaGCTTGGAGTCGGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: IEFPPYKAMTRISNGPNIHLVDF*LGVGPE
Trigger: TTCTGGACCGACTCCAAGGCAAAAGTCAACCAGGTG...AATGTTTGGTCCATTTGAAATCCTTGTCATTGCCTTATATGGGGGAAACTCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp CTTTCTGGAGATAAACTGTCCCCCTCTGAAAATCAGGGTAACACTATTAGTAAGCAGCTCCTCCAAACATaGATAAATGAGGACAAGGAG +
Preference number: 4 (lower is better)
Translates to: LSGDKLSPSENQGNTISKQLLQT*INEDKE
Trigger: CTCCTTGTCCTCATTTATGCATGTTTGGAGGAGCTG...CTTACTAATAGTGTTACCCTGATTTTCAGAGGGGGACAGTTTATCTCCAGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp GTAGCACCCATAGCTCTGATTAACCTGAAAGCATCAAGTGACTCCCTCTTTTTCAGCGTAGAAAATCAATaGTCTTACACTCTAGGGTCT +
Preference number: 4 (lower is better)
Translates to: VAPIALINLKASSDSLFFSVENQ*SYTLGS
Trigger: AGACCCTAGAGTGTAAGAGCATTGATTTTCTACGCT...GAAAAAGAGGGAGTCACTTGATGCTTTCAGGTTAATCAGAGCTATGGGTGCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp GTAGCACCCATAGCTCTGATTAACCTGAAAGCATCAAGTGACTCCCTCTTTTTCTCTCCTGGTTACCTCTaGCTACATAGATATTTGGTT +
Preference number: 4 (lower is better)
Translates to: VAPIALINLKASSDSLFFSPGYL*LHRYLV
Trigger: AACCAAATATCTATGTAGGCAGAGGTAACCAGGAGA...GAAAAAGAGGGAGTCACTTGATGCTTTCAGGTTAATCAGAGCTATGGGTGCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp AAATGGTGGAACTTTGGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTTTTATTTTAGATTGCATCAGCTaGAGTTGTTGTTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: KWWNFGISCPVTCESGFILDCIS*SCCFCL
Trigger: CAGACAGAAACAACAACTCCAGCTGATGCAATCTAA...AATAAAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAAAGTTCCACCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp GTTTATACCCCCACACATATTCTAGATAGTTCTGGTCATGAAGTAAGTCACAATATTTCCAACACAGGCTaGGGGATTGAGTTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: VYTPTHILDSSGHEVSHNISNTG*GIEFPP
Trigger: TGGGGGAAACTCAATCCCCCAGCCTGTGTTGGAAAT...ATTGTGACTTACTTCATGACCAGAACTATCTAGAATATGTGTGGGGGTATAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp CTTTCTGGAGATAAACTGTCCCCCTCTGAAAATCAGGGTAACACTATTAGTAAGGAAATGGTGGAACTTTaGGATTTCCTGTCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: LSGDKLSPSENQGNTISKEMVEL*DFLSSH
Trigger: GTGACTGGACAGGAAATCCCAAAGTTCCACCATTTC...CTTACTAATAGTGTTACCCTGATTTTCAGAGGGGGACAGTTTATCTCCAGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp GAAATTGACACCAACTTCCCTGAGAGCTTCCAAAGTAAGAAAGCATCCCTTTTTTCAGGGTCACAGAAGTaGATAAGAAAGCCAACTGAA +
Preference number: 4 (lower is better)
Translates to: EIDTNFPESFQSKKASLFSGSQK*IRKPTE
Trigger: TTCAGTTGGCTTTCTTATTCACTTCTGTGACCCTGA...AAAAAGGGATGCTTTCTTACTTTGGAAGCTCTCAGGGAAGTTGGTGTCAATTTC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp TTGGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTTTTATTCCAATTGATTCAAATTCTGTGTTCAGTTTaGTCAAGAACTCAGCGGTTT +
Preference number: 4 (lower is better)
Translates to: LGFPVQSPASQVLFQLIQILCSV*SRTQRF
Trigger: AAACCGCTGAGTTCTTGAGCAAACTGAACACAGAAT...TTGAATCAATTGGAATAAAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp GCCAACAGTAATGACAGTACTATATTTGATCTATACGGCCTGGAAAAGGGAATTACAGGCACTTCTGTCTaGCGATTCTGTGTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: ANSNDSTIFDLYGLEKGITGTSV*RFCVQF
Trigger: AAACTGAACACAGAATCGCCAGACAGAAGTGCCTGT...AATTCCCTTTTCCAGGCCGTATAGATCAAATATAGTACTGTCATTACTGTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp GCCAACAGTAATGACAGTACTATATTTGATCTATACGGCCTGGAAAAGGGAATTGCACGGTCAAGTGTGTaGGCAGTTGAAATTAAGGTA +
Preference number: 4 (lower is better)
Translates to: ANSNDSTIFDLYGLEKGIARSSV*AVEIKV
Trigger: TACCTTAATTTCAACTGCCCACACACTTGACCGTGC...AATTCCCTTTTCCAGGCCGTATAGATCAAATATAGTACTGTCATTACTGTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp GAAATTGACACCAACTTCCCTGAGAGCTTCCAAAGTAAGAAAGCATCCCTTTTTTTCATTTCAACAGAGTaGCTGGTAACACAGAAGATC +
Preference number: 4 (lower is better)
Translates to: EIDTNFPESFQSKKASLFFISTE*LVTQKI
Trigger: GATCTTCTGTGTTACCAGTCACTCTGTTGAAATGAA...AAAAAGGGATGCTTTCTTACTTTGGAAGCTCTCAGGGAAGTTGGTGTCAATTTC
40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp GCTTCTCTCCTGGTTACCTCTGCCTACATAGATATTTGGTTAAGCAAGATGTTTAACCCCATGTTTTCCTaGATAAAGAGATTCGGAAAG +
Preference number: 4 (lower is better)
Translates to: ASLLVTSAYIDIWLSKMFNPMFS*IKRFGK
Trigger: CTTTCCGAATCTCTTTATTCAGGAAAACATGGGGTT...AAACATCTTGCTTAACCAAATATCTATGTAGGCAGAGGTAACCAGGAGAGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp AGAGTGACTGGTAACACAGAAGATCTCTTAATGCTGCAAAGTATTATTAGTTGTCAACTCCTGGTTGCATaGTGGAAAATGCAGCAAGTG +
Preference number: 4 (lower is better)
Translates to: RVTGNTEDLLMLQSIISCQLLVA*WKMQQV
Trigger: CACTTGCTGCATTTTCCAGCATGCAACCAGGAGTTG...ACAACTAATAATACTTTGCAGCATTAAGAGATCTTCTGTGTTACCAGTCACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp GCTTCTCTCCTGGTTACCTCTGCCTACATAGATATTTGGTTAAGCAAGATGTTTTCTCCGGTTTATATTTaGTGCTATCAAGGTGTATGC +
Preference number: 4 (lower is better)
Translates to: ASLLVTSAYIDIWLSKMFSPVYI*CYQGVC
Trigger: GCATACACCTTGATAGCACCAAATATAAACCGGAGA...AAACATCTTGCTTAACCAAATATCTATGTAGGCAGAGGTAACCAGGAGAGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp GAAATTGACACCAACTTCCCTGAGAGCTTCCAAAGTAAGAAAGCATCCCTTTTTTTAGATTGCATCAGCTaGAGTTGTTGTTTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: EIDTNFPESFQSKKASLFLDCIS*SCCFCL
Trigger: CAGACAGAAACAACAACTCCAGCTGATGCAATCTAA...AAAAAGGGATGCTTTCTTACTTTGGAAGCTCTCAGGGAAGTTGGTGTCAATTTC
40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
3UTR CAA 72 bp CCTGTCCAGTCACCTGCGAGTCAGGTTTTATTCCAATaGATTCAACGTGGCAGATTAAATGTGAAAAGTAAA +
Preference number: 4 (lower is better)
Translates to: PVQSPASQVLFQ*IQRGRLNVKSK
Trigger: TTTACTTTTCACATTTAATCTGCCACGTTGAATCAATTGGAATAAAACCTGACTCGCAGGTGACTGGACAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp CTTTCTGGAGATAAACTGTCCCCCTCTGAAAATCAGGGTAACACTATTAGTAAGGTCCAGCTGCAAAGATaGTTTGTTGTATTTACCTTT +
Preference number: 4 (lower is better)
Translates to: LSGDKLSPSENQGNTISKVQLQR*FVVFTF
Trigger: AAAGGTAAATACAACAAATCATCTTTGCAGCTGGAC...CTTACTAATAGTGTTACCCTGATTTTCAGAGGGGGACAGTTTATCTCCAGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp ACCACACTAAAATGTCTGCTACAGCCGCACATTTACAATCAGTTTGGTGATATTCCGGTTTATATTTGGTaGTATCAAGGTGTATGCACT +
Preference number: 4 (lower is better)
Translates to: TTLKCLLQPHIYNQFGDIPVYIW*YQGVCT
Trigger: AGTGCATACACCTTGATAGCACCAAATATAAACCGG...AATATCACCAAACTGATTGTAAATGTGCGGCTGTAGCAGACATTTTAGTGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp ACCACACTAAAATGTCTGCTACAGCCGCACATTTACAATCAGTTTGGTGATATTTCTCCTCCAGTTTATTaGTCTTCTCTCTCTGAATTG +
Preference number: 4 (lower is better)
Translates to: TTLKCLLQPHIYNQFGDISPPVY*SSLSEL
Trigger: CAATTCAGAGAGAGAAGAGCAATAAACTGGAGGAGA...AATATCACCAAACTGATTGTAAATGTGCGGCTGTAGCAGACATTTTAGTGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR GCA 90 bp AGAGTGACTGGTAACACAGAAGATCTCTTAATGCTGCAAAGTATTATTAGTTGTATTTTGGCTCTTTCTTaGTCTTGCTGCTGCCGTTTC +
Preference number: 4 (lower is better)
Translates to: RVTGNTEDLLMLQSIISCILALS*SCCCRF
Trigger: GAAACGGCAGCAGCAAGAGCAAGAAAGAGCCAAAAT...ACAACTAATAATACTTTGCAGCATTAAGAGATCTTCTGTGTTACCAGTCACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp AGAGTGACTGGTAACACAGAAGATCTCTTAATGCTGCAAAGTATTATTAGTTGTACAGGCACTTCTGTCTaGCGATTCTGTGTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: RVTGNTEDLLMLQSIISCTGTSV*RFCVQF
Trigger: AAACTGAACACAGAATCGCCAGACAGAAGTGCCTGT...ACAACTAATAATACTTTGCAGCATTAAGAGATCTTCTGTGTTACCAGTCACTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp GTTTATACCCCCACACATATTCTAGATAGTTCTGGTCATGAAGTAAGTCACAATAACCCCATGTTTTCCTaGATAAAGAGATTCGGAAAG +
Preference number: 4 (lower is better)
Translates to: VYTPTHILDSSGHEVSHNNPMFS*IKRFGK
Trigger: CTTTCCGAATCTCTTTATTCAGGAAAACATGGGGTT...ATTGTGACTTACTTCATGACCAGAACTATCTAGAATATGTGTGGGGGTATAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp AGAGTGACTGGTAACACAGAAGATCTCTTAATGCTGCAAAGTATTATTAGTTGTCCCCATATAAGGCAATaGCAAGGATTTCAAATGGAC +
Preference number: 4 (lower is better)
Translates to: RVTGNTEDLLMLQSIISCPHIRQ*QGFQMD
Trigger: GTCCATTTGAAATCCTTGTCATTGCCTTATATGGGG...ACAACTAATAATACTTTGCAGCATTAAGAGATCTTCTGTGTTACCAGTCACTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR TCA 90 bp ATTGAGTTTCCCCCATATAAGGCAATGACAAGGATTTCAAATGGACCAAACATTGTCCAGCTGCAAAGATaGTTTGTTGTATTTACCTTT +
Preference number: 4 (lower is better)
Translates to: IEFPPYKAMTRISNGPNIVQLQR*FVVFTF
Trigger: AAAGGTAAATACAACAAATCATCTTTGCAGCTGGAC...AATGTTTGGTCCATTTGAAATCCTTGTCATTGCCTTATATGGGGGAAACTCAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CCA 90 bp GTTTATACCCCCACACATATTCTAGATAGTTCTGGTCATGAAGTAAGTCACAATCCAATTGATTCAACGTaGCAGATTAAATGTGAAAAG +
Preference number: 4 (lower is better)
Translates to: VYTPTHILDSSGHEVSHNPIDST*QIKCEK
Trigger: CTTTTCACATTTAATCTGCCACGTTGAATCAATTGG...ATTGTGACTTACTTCATGACCAGAACTATCTAGAATATGTGTGGGGGTATAAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS GCA 90 bp CTGGCCCGCGTGCACGACGCTCTCCCGCGAAGGGCCCTTAGGGGCTaGCTCCAAACCCTCTCTCTGGTCTTCCACGGGGCTCAGCTCCCC +
Preference number: 5 (lower is better)
Translates to: LARVHDALPRRALRG*LQTLSLVFHGAQLP
Trigger: GGGGAGCTGAGCCCCGTGGAAGACCAGAGAGAGGGTTTGGAGGCAGCCCCTAAGGGCCCTTCGCGGGAGAGCGTCGTGCACGCGGGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313624.12
ENST00000313640.11
ENST00000398762.7
ENST00000476830.6
ENST00000536042.1
ENST00000538562.5
ENST00000540470.5
CDS-3UTR CAA 90 bp TTAGTGTCAACAGCACTAACACAGCTTCAGCTGGCGGAGGAGAGGGAAACCAAGGGGGCTCAGCTCCCCTaGCCGCCCAGAAGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: LVSTALTQLQLAEERETKGAQLP*PPRRVL
Trigger: CAGGACCCTTCTGGGCGGCAAGGGGAGCTGAGCCCC...CTTGGTTTCCCTCTCCTCCGCCAGCTGAAGCTGTGTTAGTGCTGTTGACACTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS GCA 90 bp GCTGGCAGTTCCCATAGTCCCTGCATGGCTGTGATTGTCATATTCTaGACTGACCCGCTGTCCCACCCGGAGCTACATGTCCGGTGGAGA +
Preference number: 5 (lower is better)
Translates to: AGSSHSPCMAVIVIF*TDPLSHPELHVRWR
Trigger: TCTCCACCGGACATGTAGCTCCGGGTGGGACAGCGGGTCAGTGCAGAATATGACAATCACAGCCATGCAGGGACTATGGGAACTGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540470.5
CDS-3UTR CAA 90 bp TGGAGTTGTTGTTTCTGTCTGACTTCAGTTTCTGACTGGCTTCCACCTAGCCGTGGGGCTCAGCTCCCCTaGCCGCCCAGAAGGGTCCTG +
Preference number: 5 (lower is better)
Translates to: WSCCFCLTSVSDWLPPSRGAQLP*PPRRVL
Trigger: CAGGACCCTTCTGGGCGGCAAGGGGAGCTGAGCCCC...ACGGCTAGGTGGAAGCCAGTCAGAAACTGAAGTCAGACAGAAACAACAACTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538562.5
CDS CCA 90 bp CAGGTTAGAAACACAATATTCAGCCCTGACCCGTACAGGTCATCCTaGGCCCGGCCCTGTGGCACATTCTCACCAAGAGTCAGCACAGAG +
Preference number: 5 (lower is better)
Translates to: QVRNTIFSPDPYRSS*ARPCGTFSPRVSTE
Trigger: CTCTGTGCTGACTCTTGGTGAGAATGTGCCACAGGGCCGGGCCCAGGATGACCTGTACGGGTCAGGGCTGAATATTGTGTTTCTAACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540470.5
CDS-3UTR CAA 90 bp ACCCACCAATGTGGCCCTTTCCTAGTGCACCCTTGCCTAGCTCTGCGAACCCCTTGGTTGACTTTTGCCTaGGAGTCGGTCCAGAAAAGC +
Preference number: 5 (lower is better)
Translates to: THQCGPFLVHPCLALRTPWLTFA*ESVQKS
Trigger: GCTTTTCTGGACCGACTCCAAGGCAAAAGTCAACCA...AGGGGTTCGCAGAGCTAGGCAAGGGTGCACTAGGAAAGGGCCACATTGGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS TCA 90 bp AAGATACCAGAACTGCTGGCAGTTCCCATAGTCCCTGCATGGCTGTaGTTGTCATATTCTGCACTGACCCGCTGTCCCACCCGGAGCTAC +
Preference number: 5 (lower is better)
Translates to: KIPELLAVPIVPAWL*LSYSALTRCPTRSY
Trigger: GTAGCTCCGGGTGGGACAGCGGGTCAGTGCAGAATATGACAATCACAGCCATGCAGGGACTATGGGAACTGCCAGCAGTTCTGGTATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540470.5
CDS GCA 90 bp AGTCGGCTTCCTGGGGAGCAGGGCTCATTTCCTAAATGTTCACTCTaGACGACAGCAGGGGGCGCCAGAGAGAAATTAGTTCTGTCACTC +
Preference number: 5 (lower is better)
Translates to: SRLPGEQGSFPKCSL*TTAGGAREKLVLSL
Trigger: GAGTGACAGAACTAATTTCTCTCTGGCGCCCCCTGCTGTCGTGCAGAGTGAACATTTAGGAAATGAGCCCTGCTCCCCAGGAAGCCGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540470.5
CDS-3UTR CAA 90 bp TGGGAGTGCAGGGTAGGCCAGGCAGTGGAGGAGAAATTGACACCAACTTCCCTGGAGTTCACCACTCTATaGCGGGTGTTCATGGTTCAC +
Preference number: 5 (lower is better)
Translates to: WECRVGQAVEEKLTPTSLEFTTL*RVFMVH
Trigger: GTGAACCATGAACACCCGCAATAGAGTGGTGAACTC...CAGGGAAGTTGGTGTCAATTTCTCCTCCACTGCCTGGCCTACCCTGCACTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp TACCCATCTGCACAAAATCTTTGGGAGTGCAGGGTAGGCCAGGCAGTGGAGGAGGCCACAAACAGCACTTaGACAGGCACTTCTGTCTGG +
Preference number: 5 (lower is better)
Translates to: YPSAQNLWECRVGQAVEEATNST*TGTSVW
Trigger: CCAGACAGAAGTGCCTGTCAAAGTGCTGTTTGTGGC...CTCCTCCACTGCCTGGCCTACCCTGCACTCCCAAAGATTTTGTGCAGATGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS TCA 90 bp TCGCTTTATCTTCAATGCTCCCAAGCTTACTGCGACTCTAGGGAATaGGGGCTCGGTGCTACAGGTGGAGACCCTTGCTCTGGTTTCAGG +
Preference number: 5 (lower is better)
Translates to: SLYLQCSQAYCDSRE*GLGATGGDPCSGFR
Trigger: CCTGAAACCAGAGCAAGGGTCTCCACCTGTAGCACCGAGCCCTCATTCCCTAGAGTCGCAGTAAGCTTGGGAGCATTGAAGATAAAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536042.1
ENST00000540470.5
CDS-3UTR CAA 90 bp TGCAGGGTAGGCCAGGCAGTGGAGGAGAAATTGACACCAACTTCCCTGAGAGCTGCAGTGGAGGAGAAATaGACACCAACTTCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: CRVGQAVEEKLTPTSLRAAVEEK*TPTSLR
Trigger: TCTCAGGGAAGTTGGTGTCAATTTCTCCTCCACTGC...AGCTCTCAGGGAAGTTGGTGTCAATTTCTCCTCCACTGCCTGGCCTACCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp TGGGAGTGCAGGGTAGGCCAGGCAGTGGAGGAGAAATTGACACCAACTTCCCTGCTGCTCCGCAATTCTTaGTATCTCATTTCTCCGGTT +
Preference number: 5 (lower is better)
Translates to: WECRVGQAVEEKLTPTSLLLRNS*YLISPV
Trigger: AACCGGAGAAATGAGATACAAAGAATTGCGGAGCAG...CAGGGAAGTTGGTGTCAATTTCTCCTCCACTGCCTGGCCTACCCTGCACTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp CATCCCTTTTTCCTACGTCAACTCCTGGTTGCATGCTGGAAAATGCAGCAAGTGCTCGAGGCCACCTGGTaGACTTTTGCCTTGGAGTCG +
Preference number: 5 (lower is better)
Translates to: HPFFLRQLLVACWKMQQVLEATW*TFALES
Trigger: CGACTCCAAGGCAAAAGTCAACCAGGTGGCCTCGAG...CACTTGCTGCATTTTCCAGCATGCAACCAGGAGTTGACGTAGGAAAAAGGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS TCA 90 bp CAGCTTCTGGCCCATGTTGAGGATTGTGGGCCACAAACAGCACTTTaGCAGGCACTTCTGTCTGGCGATTCTGTGTTCAGTTTGCTCAAG +
Preference number: 5 (lower is better)
Translates to: QLLAHVEDCGPQTAL*QALLSGDSVFSLLK
Trigger: CTTGAGCAAACTGAACACAGAATCGCCAGACAGAAGTGCCTGTCAAAGTGCTGTTTGTGGCCCACAATCCTCAACATGGGCCAGAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313624.12
CDS-3UTR CAA 90 bp TGCAGGGTAGGCCAGGCAGTGGAGGAGAAATTGACACCAACTTCCCTGAGAGCTCTCAGCGGTTTTGTATaGCTGATGCTCTCTAAATGC +
Preference number: 5 (lower is better)
Translates to: CRVGQAVEEKLTPTSLRALSGFV*LMLSKC
Trigger: GCATTTAGAGAGCATCAGCAATACAAAACCGCTGAG...AGCTCTCAGGGAAGTTGGTGTCAATTTCTCCTCCACTGCCTGGCCTACCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp TGGCCCTTTCCTAGTGCACCCTTGCCTAGCTCTGCGAACCCCTCAGTTATGTCTGATTCTGTGTTCAGTTaGCTCAAGAACTCAGCGGTT +
Preference number: 5 (lower is better)
Translates to: WPFPSAPLPSSANPSVMSDSVFS*LKNSAV
Trigger: AACCGCTGAGTTCTTGAGCAAACTGAACACAGAATC...AGACATAACTGAGGGGTTCGCAGAGCTAGGCAAGGGTGCACTAGGAAAGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS GCA 90 bp CTGCTCCGCAATTCTTTGTATCTCATTTCTCCGGTTTATATTTGGTaGTATCAAGGTGTATGCACTTGTGCGCCTCTGGCCCGCGTGCAC +
Preference number: 5 (lower is better)
Translates to: LLRNSLYLISPVYIW*YQGVCTCAPLARVH
Trigger: GTGCACGCGGGCCAGAGGCGCACAAGTGCATACACCTTGATAGCACCAAATATAAACCGGAGAAATGAGATACAAAGAATTGCGGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313624.12
ENST00000313640.11
ENST00000398762.7
CDS CCA 90 bp CTCCTGCTCCGCAATTCTTTGTATCTCATTTCTCCGGTTTATATTTaGTGCTATCAAGGTGTATGCACTTGTGCGCCTCTGGCCCGCGTG +
Preference number: 5 (lower is better)
Translates to: LLLRNSLYLISPVYI*CYQGVCTCAPLARV
Trigger: CACGCGGGCCAGAGGCGCACAAGTGCATACACCTTGATAGCACCAAATATAAACCGGAGAAATGAGATACAAAGAATTGCGGAGCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313624.12
ENST00000313640.11
ENST00000398762.7
CDS-3UTR CAA 90 bp TGGGAGTGCAGGGTAGGCCAGGCAGTGGAGGAGAAATTGACACCAACTTCCCTGTTCTCCGGTTTATATTaGGTGCTATCAAGGTGTATG +
Preference number: 5 (lower is better)
Translates to: WECRVGQAVEEKLTPTSLFSGLY*VLSRCM
Trigger: CATACACCTTGATAGCACCAAATATAAACCGGAGAA...CAGGGAAGTTGGTGTCAATTTCTCCTCCACTGCCTGGCCTACCCTGCACTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp TACCCATCTGCACAAAATCTTTGGGAGTGCAGGGTAGGCCAGGCAGTGGAGGAGCCTCAGTTATGTCTCTaGGCCCAAGAATTTCAAAAC +
Preference number: 5 (lower is better)
Translates to: YPSAQNLWECRVGQAVEEPQLCL*AQEFQN
Trigger: GTTTTGAAATTCTTGGGCCAAGAGACATAACTGAGG...CTCCTCCACTGCCTGGCCTACCCTGCACTCCCAAAGATTTTGTGCAGATGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp TTAGTGTCAACAGCACTAACACAGCTTCAGCTGGCGGAGGAGAGGGAAACCAAGTTTAGGCAGCAAGTCTaGCTTCTCTCCTGGTTACCT +
Preference number: 5 (lower is better)
Translates to: LVSTALTQLQLAEERETKFRQQV*LLSWLP
Trigger: AGGTAACCAGGAGAGAAGCAAGACTTGCTGCCTAAA...CTTGGTTTCCCTCTCCTCCGCCAGCTGAAGCTGTGTTAGTGCTGTTGACACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS GCA 90 bp TATTCCAACAGCCTCCAGATTGCTCGAGGCCACCTGGTTGACTTTTaGCTTGGAGTCGGTCCAGAAAAGCATTATTTACCCTCCTGTGTT +
Preference number: 5 (lower is better)
Translates to: YSNSLQIARGHLVDF*LGVGPEKHYLPSCV
Trigger: AACACAGGAGGGTAAATAATGCTTTTCTGGACCGACTCCAAGGCAAAAGTCAACCAGGTGGCCTCGAGCAATCTGGAGGCTGTTGGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313624.12
ENST00000313640.11
ENST00000398762.7
ENST00000535677.5
ENST00000540470.5
CDS GCA 90 bp TTAGCTCTGTTCTGCTCCTTCCACTTCTCCAGGTTGGCCAGCTCCTaGTCCGCAACTAAGCCAGGCGAGAAATATCAAATCGTCAATTAT +
Preference number: 5 (lower is better)
Translates to: LALFCSFHFSRLASS*SATKPGEKYQIVNY
Trigger: ATAATTGACGATTTGATATTTCTCGCCTGGCTTAGTTGCGGAGCAGGAGCTGGCCAACCTGGAGAAGTGGAAGGAGCAGAACAGAGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540470.5
CDS-3UTR CAA 90 bp TGGAGTTGTTGTTTCTGTCTGACTTCAGTTTCTGACTGGCTTCCACCTAGCCGTGAGTTCACCACTCTATaGCGGGTGTTCATGGTTCAC +
Preference number: 5 (lower is better)
Translates to: WSCCFCLTSVSDWLPPSREFTTL*RVFMVH
Trigger: GTGAACCATGAACACCCGCAATAGAGTGGTGAACTC...ACGGCTAGGTGGAAGCCAGTCAGAAACTGAAGTCAGACAGAAACAACAACTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538562.5
CDS-3UTR CAA 90 bp AGTGTCAACAGCACTAACACAGCTTCAGCTGGCGGAGGAGAGGGAAACCAAGAATTGCATCAGCTGGAGTaGTTGTTTCTGTCTGACTTC +
Preference number: 5 (lower is better)
Translates to: SVNSTNTASAGGGEGNQELHQLE*LFLSDF
Trigger: GAAGTCAGACAGAAACAACAACTCCAGCTGATGCAA...TTCTTGGTTTCCCTCTCCTCCGCCAGCTGAAGCTGTGTTAGTGCTGTTGACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp TTAGTGTCAACAGCACTAACACAGCTTCAGCTGGCGGAGGAGAGGGAAACCAAGTTGCATCAGCTGGAGTaGTTGTTTCTGTCTGACTTC +
Preference number: 5 (lower is better)
Translates to: LVSTALTQLQLAEERETKLHQLE*LFLSDF
Trigger: GAAGTCAGACAGAAACAACAACTCCAGCTGATGCAA...CTTGGTTTCCCTCTCCTCCGCCAGCTGAAGCTGTGTTAGTGCTGTTGACACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp ATAGAAATGGTGGAACTTTGGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTTTGCCACAAACAGCACTTaGACAGGCACTTCTGTCTGG +
Preference number: 5 (lower is better)
Translates to: IEMVELWDFLSSHLRVRFATNST*TGTSVW
Trigger: CCAGACAGAAGTGCCTGTCAAAGTGCTGTTTGTGGC...AAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAAAGTTCCACCATTTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp GCTTCTCTCCTGGTTACCTCTGCCTACATAGATATTTGGTTAAGCAAGATGTTTCCAACAGCCTCCAGATaGCTCGAGGCCACCTGGTTG +
Preference number: 5 (lower is better)
Translates to: ASLLVTSAYIDIWLSKMFPTASR*LEATWL
Trigger: CAACCAGGTGGCCTCGAGCAATCTGGAGGCTGTTGG...AAACATCTTGCTTAACCAAATATCTATGTAGGCAGAGGTAACCAGGAGAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp TGGGAGTGCAGGGTAGGCCAGGCAGTGGAGGAGAAATTGACACCAACTTCCCTGATGTGTATACAAACATaGGCCTTTCTGGAGATAAAC +
Preference number: 5 (lower is better)
Translates to: WECRVGQAVEEKLTPTSLMCIQT*AFLEIN
Trigger: GTTTATCTCCAGAAAGGCCAATGTTTGTATACACAT...CAGGGAAGTTGGTGTCAATTTCTCCTCCACTGCCTGGCCTACCCTGCACTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS TCA 90 bp GAGTCTTGCTGGGACGTAGGCTTGCTCCTACCTAGAGGCAGAATTTaGACCTTCTACCCCATATCACATTTCTTGTTGACCCTTACCTGT +
Preference number: 5 (lower is better)
Translates to: ESCWDVGLLLPRGRI*TFYPISHFLLTLTC
Trigger: ACAGGTAAGGGTCAACAAGAAATGTGATATGGGGTAGAAGGTTCAAATTCTGCCTCTAGGTAGGAGCAAGCCTACGTCCCAGCAAGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542706.5
CDS CCA 90 bp ACCGCTATTCATATTCCAACAGCCTCCAGATTGCTCGAGGCCACCTaGTTGACTTTTGCCTTGGAGTCGGTCCAGAAAAGCATTATTTAC +
Preference number: 5 (lower is better)
Translates to: TAIHIPTASRLLEAT*LTFALESVQKSIIY
Trigger: GTAAATAATGCTTTTCTGGACCGACTCCAAGGCAAAAGTCAACCAGGTGGCCTCGAGCAATCTGGAGGCTGTTGGAATATGAATAGCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313624.12
ENST00000313640.11
ENST00000398762.7
ENST00000535677.5
ENST00000540470.5
CDS-3UTR CAA 90 bp GTAGCACCCATAGCTCTGATTAACCTGAAAGCATCAAGTGACTCCCTCTTTTTCGGCTCTTTCTTGCTCTaGCTGCTGCCGTTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: VAPIALINLKASSDSLFFGSFLL*LLPFQF
Trigger: GAACTGAAACGGCAGCAGCAAGAGCAAGAAAGAGCC...GAAAAAGAGGGAGTCACTTGATGCTTTCAGGTTAATCAGAGCTATGGGTGCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp AGAATATCCACATTATTTACTCCAGAGAAACTTCCTGACACCATCTGTTCTCTGCCAACAGCCTCCAGATaGCTCGAGGCCACCTGGTTG +
Preference number: 5 (lower is better)
Translates to: RISTLFTPEKLPDTICSLPTASR*LEATWL
Trigger: CAACCAGGTGGCCTCGAGCAATCTGGAGGCTGTTGG...CAGAGAACAGATGGTGTCAGGAAGTTTCTCTGGAGTAAATAATGTGGATATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp GAAATTGACACCAACTTCCCTGAGAGCTTCCAAAGTAAGAAAGCATCCCTTTTTTTTCCTAGTGCACCCTaGCCTAGCTCTGCGAACCCC +
Preference number: 5 (lower is better)
Translates to: EIDTNFPESFQSKKASLFFPSAP*PSSANP
Trigger: GGGGTTCGCAGAGCTAGGCAAGGGTGCACTAGGAAA...AAAAAGGGATGCTTTCTTACTTTGGAAGCTCTCAGGGAAGTTGGTGTCAATTTC
48% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp AAATGGTGGAACTTTGGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTTTTATTACACAGGCTGGGGGATaGAGTTTCCCCCATATAAGG +
Preference number: 5 (lower is better)
Translates to: KWWNFGISCPVTCESGFITQAGG*SFPHIR
Trigger: CCTTATATGGGGGAAACTCAATCCCCCAGCCTGTGT...AATAAAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAAAGTTCCACCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp AAGCATCCCTTTTTCCTACGTCAACTCCTGGTTGCATGCTGGAAAATGCAGCAATACGTCAACTCCTGGTaGCATGCTGGAAAATGCAGC +
Preference number: 5 (lower is better)
Translates to: KHPFFLRQLLVACWKMQQYVNSW*HAGKCS
Trigger: GCTGCATTTTCCAGCATGCAACCAGGAGTTGACGTA...TTGCTGCATTTTCCAGCATGCAACCAGGAGTTGACGTAGGAAAAAGGGATGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp GTAAAATGGTGGGCTCCTTTAGGCAGCAAGTCTTGCTTCTCTCCTGGTTACCTCAGAAATGGTGGAACTTaGGGATTTCCTGTCCAGTCA +
Preference number: 5 (lower is better)
Translates to: VKWWAPLGSKSCFSPGYLRNGGT*GFPVQS
Trigger: TGACTGGACAGGAAATCCCAAAGTTCCACCATTTCT...GAGGTAACCAGGAGAGAAGCAAGACTTGCTGCCTAAAGGAGCCCACCATTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS TCA 90 bp ATAGGAAGTTTCCATGTTGAGGATTGTGGGCCACAAACAGCACTTTaGCAGGCACTTCTGTCTGGCGATTCTGTGTTCAGTTTGCTCAAG +
Preference number: 5 (lower is better)
Translates to: IGSFHVEDCGPQTAL*QALLSGDSVFSLLK
Trigger: CTTGAGCAAACTGAACACAGAATCGCCAGACAGAAGTGCCTGTCAAAGTGCTGTTTGTGGCCCACAATCCTCAACATGGAAACTTCCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313640.11
ENST00000398762.7
ENST00000476830.6
ENST00000540470.5
CDS-3UTR CAA 90 bp CATCCCTTTTTCCTACGTCAACTCCTGGTTGCATGCTGGAAAATGCAGCAAGTGCTGCTCCGCAATTCTTaGTATCTCATTTCTCCGGTT +
Preference number: 5 (lower is better)
Translates to: HPFFLRQLLVACWKMQQVLLRNS*YLISPV
Trigger: AACCGGAGAAATGAGATACAAAGAATTGCGGAGCAG...CACTTGCTGCATTTTCCAGCATGCAACCAGGAGTTGACGTAGGAAAAAGGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp TGGAGTTGTTGTTTCTGTCTGACTTCAGTTTCTGACTGGCTTCCACCTAGCCGTTTGCATCAGCTGGAGTaGTTGTTTCTGTCTGACTTC +
Preference number: 5 (lower is better)
Translates to: WSCCFCLTSVSDWLPPSRLHQLE*LFLSDF
Trigger: GAAGTCAGACAGAAACAACAACTCCAGCTGATGCAA...ACGGCTAGGTGGAAGCCAGTCAGAAACTGAAGTCAGACAGAAACAACAACTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538562.5
CDS-3UTR CAA 90 bp TTAGTGTCAACAGCACTAACACAGCTTCAGCTGGCGGAGGAGAGGGAAACCAAGAATTGCCTTCATTTTTaGGAGTTCAGCTTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LVSTALTQLQLAEERETKNCLHF*EFSFFS
Trigger: GCTGAAGAAGCTGAACTCCAAAAAATGAAGGCAATT...CTTGGTTTCCCTCTCCTCCGCCAGCTGAAGCTGTGTTAGTGCTGTTGACACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp GCCAACAGTAATGACAGTACTATATTTGATCTATACGGCCTGGAAAAGGGAATTCTCGAGGCCACCTGGTaGACTTTTGCCTTGGAGTCG +
Preference number: 5 (lower is better)
Translates to: ANSNDSTIFDLYGLEKGILEATW*TFALES
Trigger: CGACTCCAAGGCAAAAGTCAACCAGGTGGCCTCGAG...AATTCCCTTTTCCAGGCCGTATAGATCAAATATAGTACTGTCATTACTGTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp AGAATATCCACATTATTTACTCCAGAGAAACTTCCTGACACCATCTGTTCTCTGTTTCCTAGTGCACCCTaGCCTAGCTCTGCGAACCCC +
Preference number: 5 (lower is better)
Translates to: RISTLFTPEKLPDTICSLFPSAP*PSSANP
Trigger: GGGGTTCGCAGAGCTAGGCAAGGGTGCACTAGGAAA...CAGAGAACAGATGGTGTCAGGAAGTTTCTCTGGAGTAAATAATGTGGATATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp CGTGGCAGATTAAATGTGAAAAGTAAAATGGTGGGCTCCTTTAGGCAGCAAGTCGCAGTGGAGGAGAAATaGACACCAACTTCCCTGAGA +
Preference number: 5 (lower is better)
Translates to: RGRLNVKSKMVGSFRQQVAVEEK*TPTSLR
Trigger: TCTCAGGGAAGTTGGTGTCAATTTCTCCTCCACTGC...GACTTGCTGCCTAAAGGAGCCCACCATTTTACTTTTCACATTTAATCTGCCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS GCA 90 bp CTGCTCCGCAATTCTTTGTATCTCATTTCTCCGGTTTATATTTGGTaGTATCAAGGTGTATGCACTTGTGCTCCTCACTCTCTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LLRNSLYLISPVYIW*YQGVCTCAPHSLSS
Trigger: GGAGCTGAGAGAGTGAGGAGCACAAGTGCATACACCTTGATAGCACCAAATATAAACCGGAGAAATGAGATACAAAGAATTGCGGAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476830.6
ENST00000537828.5
CDS GCA 90 bp ACTATACATACTTCTTTGTATCTCATTTCTCCGGTTTATATTTGGTaGTATCAAGGTGTATGCACTTGTGCGCCTCTGGCCCGCGTGCAC +
Preference number: 5 (lower is better)
Translates to: TIHTSLYLISPVYIW*YQGVCTCAPLARVH
Trigger: GTGCACGCGGGCCAGAGGCGCACAAGTGCATACACCTTGATAGCACCAAATATAAACCGGAGAAATGAGATACAAAGAAGTATGTATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540470.5
CDS CCA 90 bp CTCCTGCTCCGCAATTCTTTGTATCTCATTTCTCCGGTTTATATTTaGTGCTATCAAGGTGTATGCACTTGTGCTCCTCACTCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: LLLRNSLYLISPVYI*CYQGVCTCAPHSLS
Trigger: GCTGAGAGAGTGAGGAGCACAAGTGCATACACCTTGATAGCACCAAATATAAACCGGAGAAATGAGATACAAAGAATTGCGGAGCAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476830.6
ENST00000537828.5
CDS-3UTR CAA 90 bp AAATGGTGGAACTTTGGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTTTTATTTCAGTCTGGTGGATTTaGGCTCTTTCTTGCTCTTGC +
Preference number: 5 (lower is better)
Translates to: KWWNFGISCPVTCESGFISVWWI*ALSCSC
Trigger: GCAAGAGCAAGAAAGAGCCAAAATCCACCAGACTGA...AATAAAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAAAGTTCCACCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp TTGGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTTTTATTCCAATTGATTCAATGGTTGACTTTTGCCTaGGAGTCGGTCCAGAAAAGC +
Preference number: 5 (lower is better)
Translates to: LGFPVQSPASQVLFQLIQWLTFA*ESVQKS
Trigger: GCTTTTCTGGACCGACTCCAAGGCAAAAGTCAACCA...TTGAATCAATTGGAATAAAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS CCA 90 bp ATGACTATACATACTTCTTTGTATCTCATTTCTCCGGTTTATATTTaGTGCTATCAAGGTGTATGCACTTGTGCGCCTCTGGCCCGCGTG +
Preference number: 5 (lower is better)
Translates to: MTIHTSLYLISPVYI*CYQGVCTCAPLARV
Trigger: CACGCGGGCCAGAGGCGCACAAGTGCATACACCTTGATAGCACCAAATATAAACCGGAGAAATGAGATACAAAGAAGTATGTATAGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540470.5
CDS-3UTR CAA 90 bp TGGAGTTGTTGTTTCTGTCTGACTTCAGTTTCTGACTGGCTTCCACCTAGCCGTAATTGCCTTCATTTTTaGGAGTTCAGCTTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: WSCCFCLTSVSDWLPPSRNCLHF*EFSFFS
Trigger: GCTGAAGAAGCTGAACTCCAAAAAATGAAGGCAATT...ACGGCTAGGTGGAAGCCAGTCAGAAACTGAAGTCAGACAGAAACAACAACTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538562.5
CDS-3UTR CAA 90 bp GTAGCACCCATAGCTCTGATTAACCTGAAAGCATCAAGTGACTCCCTCTTTTTCCTCAGCGGTTTTGTATaGCTGATGCTCTCTAAATGC +
Preference number: 5 (lower is better)
Translates to: VAPIALINLKASSDSLFFLSGFV*LMLSKC
Trigger: GCATTTAGAGAGCATCAGCAATACAAAACCGCTGAG...GAAAAAGAGGGAGTCACTTGATGCTTTCAGGTTAATCAGAGCTATGGGTGCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp GCCAACAGTAATGACAGTACTATATTTGATCTATACGGCCTGGAAAAGGGAATTAGCTTCTGGCCCATGTaGAGGATTGTGGGCCACAAA +
Preference number: 5 (lower is better)
Translates to: ANSNDSTIFDLYGLEKGISFWPM*RIVGHK
Trigger: TTTGTGGCCCACAATCCTCAACATGGGCCAGAAGCT...AATTCCCTTTTCCAGGCCGTATAGATCAAATATAGTACTGTCATTACTGTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313624.12
CDS-3UTR CAA 90 bp GCCAACAGTAATGACAGTACTATATTTGATCTATACGGCCTGGAAAAGGGAATTGGCTCTTTCTTGCTCTaGCTGCTGCCGTTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: ANSNDSTIFDLYGLEKGIGSFLL*LLPFQF
Trigger: GAACTGAAACGGCAGCAGCAAGAGCAAGAAAGAGCC...AATTCCCTTTTCCAGGCCGTATAGATCAAATATAGTACTGTCATTACTGTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp GTAAAATGGTGGGCTCCTTTAGGCAGCAAGTCTTGCTTCTCTCCTGGTTACCTCATGTGTATACAAACATaGGCCTTTCTGGAGATAAAC +
Preference number: 5 (lower is better)
Translates to: VKWWAPLGSKSCFSPGYLMCIQT*AFLEIN
Trigger: GTTTATCTCCAGAAAGGCCAATGTTTGTATACACAT...GAGGTAACCAGGAGAGAAGCAAGACTTGCTGCCTAAAGGAGCCCACCATTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp AAGCATCCCTTTTTCCTACGTCAACTCCTGGTTGCATGCTGGAAAATGCAGCAACCTCAGTTATGTCTCTaGGCCCAAGAATTTCAAAAC +
Preference number: 5 (lower is better)
Translates to: KHPFFLRQLLVACWKMQQPQLCL*AQEFQN
Trigger: GTTTTGAAATTCTTGGGCCAAGAGACATAACTGAGG...TTGCTGCATTTTCCAGCATGCAACCAGGAGTTGACGTAGGAAAAAGGGATGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp AGAATATCCACATTATTTACTCCAGAGAAACTTCCTGACACCATCTGTTCTCTGACACAGGCTGGGGGATaGAGTTTCCCCCATATAAGG +
Preference number: 5 (lower is better)
Translates to: RISTLFTPEKLPDTICSLTQAGG*SFPHIR
Trigger: CCTTATATGGGGGAAACTCAATCCCCCAGCCTGTGT...CAGAGAACAGATGGTGTCAGGAAGTTTCTCTGGAGTAAATAATGTGGATATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp TGGAGTTGTTGTTTCTGTCTGACTTCAGTTTCTGACTGGCTTCCACCTAGCCGTTCTTCAGCTTCCTTCTaGATTCTTACAGATTCTTCT +
Preference number: 5 (lower is better)
Translates to: WSCCFCLTSVSDWLPPSRSSASF*ILTDSS
Trigger: AGAAGAATCTGTAAGAATCAAGAAGGAAGCTGAAGA...ACGGCTAGGTGGAAGCCAGTCAGAAACTGAAGTCAGACAGAAACAACAACTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538562.5
CDS-3UTR CAA 90 bp GAAATTGACACCAACTTCCCTGAGAGCTTCCAAAGTAAGAAAGCATCCCTTTTTTCAGTCTGGTGGATTTaGGCTCTTTCTTGCTCTTGC +
Preference number: 5 (lower is better)
Translates to: EIDTNFPESFQSKKASLFSVWWI*ALSCSC
Trigger: GCAAGAGCAAGAAAGAGCCAAAATCCACCAGACTGA...AAAAAGGGATGCTTTCTTACTTTGGAAGCTCTCAGGGAAGTTGGTGTCAATTTC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp ATTGAGTTTCCCCCATATAAGGCAATGACAAGGATTTCAAATGGACCAAACATTGAGTTCACCACTCTATaGCGGGTGTTCATGGTTCAC +
Preference number: 5 (lower is better)
Translates to: IEFPPYKAMTRISNGPNIEFTTL*RVFMVH
Trigger: GTGAACCATGAACACCCGCAATAGAGTGGTGAACTC...AATGTTTGGTCCATTTGAAATCCTTGTCATTGCCTTATATGGGGGAAACTCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp GAAATTGACACCAACTTCCCTGAGAGCTTCCAAAGTAAGAAAGCATCCCTTTTTGATTCTGTGTTCAGTTaGCTCAAGAACTCAGCGGTT +
Preference number: 5 (lower is better)
Translates to: EIDTNFPESFQSKKASLFDSVFS*LKNSAV
Trigger: AACCGCTGAGTTCTTGAGCAAACTGAACACAGAATC...AAAAAGGGATGCTTTCTTACTTTGGAAGCTCTCAGGGAAGTTGGTGTCAATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp ATAGAAATGGTGGAACTTTGGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTTTATGACAGTACTATATTaGATCTATACGGCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: IEMVELWDFLSSHLRVRFMTVLY*IYTAWK
Trigger: TTTCCAGGCCGTATAGATCAAATATAGTACTGTCAT...AAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAAAGTTCCACCATTTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp ATAGAAATGGTGGAACTTTGGGATTTCCTGTCCAGTCACCTGCGAGTCAGGTTTCAGGTTTTATTCCAATaGATTCAACGTGGCAGATTA +
Preference number: 5 (lower is better)
Translates to: IEMVELWDFLSSHLRVRFQVLFQ*IQRGRL
Trigger: TAATCTGCCACGTTGAATCAATTGGAATAAAACCTG...AAACCTGACTCGCAGGTGACTGGACAGGAAATCCCAAAGTTCCACCATTTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS TCA 90 bp AATAAGAACTTTCCACACATAGGTAAACATATCCCCAGAGAATTCTaGTGCCCATACTCGCTTTATCTTCAATGCTCCCAAGCTTACTGC +
Preference number: 5 (lower is better)
Translates to: NKNFPHIGKHIPREF*CPYSLYLQCSQAYC
Trigger: GCAGTAAGCTTGGGAGCATTGAAGATAAAGCGAGTATGGGCATCAGAATTCTCTGGGGATATGTTTACCTATGTGTGGAAAGTTCTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536042.1
ENST00000540470.5
CDS-3UTR CAA 90 bp CGTGGCAGATTAAATGTGAAAAGTAAAATGGTGGGCTCCTTTAGGCAGCAAGTCATGACAGTACTATATTaGATCTATACGGCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: RGRLNVKSKMVGSFRQQVMTVLY*IYTAWK
Trigger: TTTCCAGGCCGTATAGATCAAATATAGTACTGTCAT...GACTTGCTGCCTAAAGGAGCCCACCATTTTACTTTTCACATTTAATCTGCCACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp GAAATTGACACCAACTTCCCTGAGAGCTTCCAAAGTAAGAAAGCATCCCTTTTTAATTGCCTTCATTTTTaGGAGTTCAGCTTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: EIDTNFPESFQSKKASLFNCLHF*EFSFFS
Trigger: GCTGAAGAAGCTGAACTCCAAAAAATGAAGGCAATT...AAAAAGGGATGCTTTCTTACTTTGGAAGCTCTCAGGGAAGTTGGTGTCAATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp AGAGTGACTGGTAACACAGAAGATCTCTTAATGCTGCAAAGTATTATTAGTTGTTTTAGGCAGCAAGTCTaGCTTCTCTCCTGGTTACCT +
Preference number: 5 (lower is better)
Translates to: RVTGNTEDLLMLQSIISCFRQQV*LLSWLP
Trigger: AGGTAACCAGGAGAGAAGCAAGACTTGCTGCCTAAA...ACAACTAATAATACTTTGCAGCATTAAGAGATCTTCTGTGTTACCAGTCACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp GAAATTGACACCAACTTCCCTGAGAGCTTCCAAAGTAAGAAAGCATCCCTTTTTTCTTCAGCTTCCTTCTaGATTCTTACAGATTCTTCT +
Preference number: 5 (lower is better)
Translates to: EIDTNFPESFQSKKASLFSSASF*ILTDSS
Trigger: AGAAGAATCTGTAAGAATCAAGAAGGAAGCTGAAGA...AAAAAGGGATGCTTTCTTACTTTGGAAGCTCTCAGGGAAGTTGGTGTCAATTTC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp GAAATTGACACCAACTTCCCTGAGAGCTTCCAAAGTAAGAAAGCATCCCTTTTTCAGGTTTTATTCCAATaGATTCAACGTGGCAGATTA +
Preference number: 5 (lower is better)
Translates to: EIDTNFPESFQSKKASLFQVLFQ*IQRGRL
Trigger: TAATCTGCCACGTTGAATCAATTGGAATAAAACCTG...AAAAAGGGATGCTTTCTTACTTTGGAAGCTCTCAGGGAAGTTGGTGTCAATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp GTTTATACCCCCACACATATTCTAGATAGTTCTGGTCATGAAGTAAGTCACAATTTCTCCGGTTTATATTaGGTGCTATCAAGGTGTATG +
Preference number: 5 (lower is better)
Translates to: VYTPTHILDSSGHEVSHNFSGLY*VLSRCM
Trigger: CATACACCTTGATAGCACCAAATATAAACCGGAGAA...ATTGTGACTTACTTCATGACCAGAACTATCTAGAATATGTGTGGGGGTATAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS-3UTR CAA 90 bp GTTTATACCCCCACACATATTCTAGATAGTTCTGGTCATGAAGTAAGTCACAATTCTTCAGCTTCCTTCTaGATTCTTACAGATTCTTCT +
Preference number: 5 (lower is better)
Translates to: VYTPTHILDSSGHEVSHNSSASF*ILTDSS
Trigger: AGAAGAATCTGTAAGAATCAAGAAGGAAGCTGAAGA...ATTGTGACTTACTTCATGACCAGAACTATCTAGAATATGTGTGGGGGTATAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313624.12
ENST00000313640.11
CDS GCA 72 bp TGGCCAGCTCCTGCTCCGCAACGCCTCTGGCCCGCGTaGACGACGCTCTCCCGCGAAGGGCCCTTAGGGGCT +
Preference number: 6 (lower is better)
Translates to: WPAPAPQRLWPA*TTLSREGPLGA
Trigger: AGCCCCTAAGGGCCCTTCGCGGGAGAGCGTCGTGCACGCGGGCCAGAGGCGTTGCGGAGCAGGAGCTGGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538562.5
CDS GCA 72 bp CAGGGGAGGCGCCGAGCCCGGAGTTCACCACTCTATTaGGGGTGTTCATGGTTCACAGCCCGCGGGTCCCGG +
Preference number: 6 (lower is better)
Translates to: QGRRRARSSPLY*GCSWFTARGSR
Trigger: CCGGGACCCGCGGGCTGTGAACCATGAACACCCGCAATAGAGTGGTGAACTCCGGGCTCGGCGCCTCCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313624.12
ENST00000313640.11
ENST00000536042.1
ENST00000538562.5
ENST00000540470.5
CDS CAA 72 bp GCAGGGGAGGCGCCGAGCCCGGAGTTCACCACTCTATaGCGGGTGTTCATGGTTCACAGCCCGCGGGTCCCG +
Preference number: 6 (lower is better)
Translates to: AGEAPSPEFTTL*RVFMVHSPRVP
Trigger: CGGGACCCGCGGGCTGTGAACCATGAACACCCGCAATAGAGTGGTGAACTCCGGGCTCGGCGCCTCCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313624.12
ENST00000313640.11
ENST00000536042.1
ENST00000538562.5
ENST00000540470.5
CDS GCA 72 bp GTGCACGACGCTCTCCCGCGAAGGGCCCTTAGGGGCTaGCTCCAAACCCTCTCTCTGGTCTTCCACGGGGCT +
Preference number: 6 (lower is better)
Translates to: VHDALPRRALRG*LQTLSLVFHGA
Trigger: AGCCCCGTGGAAGACCAGAGAGAGGGTTTGGAGGCAGCCCCTAAGGGCCCTTCGCGGGAGAGCGTCGTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000313624.12
ENST00000313640.11
ENST00000398762.7
ENST00000476830.6
ENST00000536042.1
ENST00000538562.5
ENST00000540470.5
CDS GCA 72 bp ATCAAGGTGTATGCACTTGTGCGCCTCTGGCCCGCGTaGACGACGCTCTCCCGCGAAGGGCCCTTAGGGGCT +
Preference number: 6 (lower is better)
Translates to: IKVYALVRLWPA*TTLSREGPLGA
Trigger: AGCCCCTAAGGGCCCTTCGCGGGAGAGCGTCGTGCACGCGGGCCAGAGGCGCACAAGTGCATACACCTTGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313624.12
ENST00000313640.11
ENST00000398762.7
ENST00000536042.1
ENST00000540470.5
CDS TCA 72 bp TGGCCAGCTCCTGCTCCGCAATGCGACTCTAGGGAATaGGGGCTCGGTGCTACAGGTGGAGACCCTTGCTCT +
Preference number: 6 (lower is better)
Translates to: WPAPAPQCDSRE*GLGATGGDPCS
Trigger: AGAGCAAGGGTCTCCACCTGTAGCACCGAGCCCTCATTCCCTAGAGTCGCATTGCGGAGCAGGAGCTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542706.5
CDS CCA 72 bp ATGAGGGCTCGGTGCTACAGGTGGAGACCCTTGCTCTaGTTTCAGGCACTCCAGACCACTGTGCAGAGTCGG +
Preference number: 6 (lower is better)
Translates to: MRARCYRWRPLL*FQALQTTVQSR
Trigger: CCGACTCTGCACAGTGGTCTGGAGTGCCTGAAACCAGAGCAAGGGTCTCCACCTGTAGCACCGAGCCCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536042.1
ENST00000540470.5
ENST00000542706.5
CDS CAA 90 bp CAGCTCCACTCCTCTGGTTGTAAGAGGCTAGTTTATCTGCGAGTCTaGCTGGGACGTAGGCTTGCTCCTACCGCCTCTGGCCCGCGTGCA +
Preference number: 6 (lower is better)
Translates to: QLHSSGCKRLVYLRV*LGRRLAPTASGPRA
Trigger: TGCACGCGGGCCAGAGGCGGTAGGAGCAAGCCTACGTCCCAGCAAGACTCGCAGATAAACTAGCCTCTTACAACCAGAGGAGTGGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476830.6
CDS TCA 72 bp TCTGACTGGCTTCCACCTAGCCGTCTGGGCACCAGGTaGACCGGTTTAGCTCTGTTCTGCTCCTTCCACTTC +
Preference number: 6 (lower is better)
Translates to: SDWLPPSRLGTR*TGLALFCSFHF
Trigger: GAAGTGGAAGGAGCAGAACAGAGCTAAACCGGTTCACCTGGTGCCCAGACGGCTAGGTGGAAGCCAGTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313624.12
ENST00000313640.11
ENST00000398762.7
ENST00000476830.6
ENST00000537828.5
ENST00000538562.5
ENST00000540470.5
ENST00000542706.5
CDS CCA 72 bp AACACAATATTCAGCCCTGACCCGTACAGGTCATCCTaGGCCCGGCCCTGTGGCACATTCTCACCAAGAGTC +
Preference number: 6 (lower is better)
Translates to: NTIFSPDPYRSS*ARPCGTFSPRV
Trigger: GACTCTTGGTGAGAATGTGCCACAGGGCCGGGCCCAGGATGACCTGTACGGGTCAGGGCTGAATATTGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540470.5
CDS TCA 72 bp GAACTGCTGGCAGTTCCCATAGTCCCTGCATGGCTGTaGTTGTCATATTCTGCACTGACCCGCTGTCCCACC +
Preference number: 6 (lower is better)
Translates to: ELLAVPIVPAWL*LSYSALTRCPT
Trigger: GGTGGGACAGCGGGTCAGTGCAGAATATGACAATCACAGCCATGCAGGGACTATGGGAACTGCCAGCAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540470.5
CDS TCA 72 bp CTTCAATGCTCCCAAGCTTACTGCGACTCTAGGGAATaGGGGCTCGGTGCTACAGGTGGAGACCCTTGCTCT +
Preference number: 6 (lower is better)
Translates to: LQCSQAYCDSRE*GLGATGGDPCS
Trigger: AGAGCAAGGGTCTCCACCTGTAGCACCGAGCCCTCATTCCCTAGAGTCGCAGTAAGCTTGGGAGCATTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536042.1
ENST00000540470.5
CDS GCA 72 bp TCCCATAGTCCCTGCATGGCTGTGATTGTCATATTCTaGACTGACCCGCTGTCCCACCCGGAGCTACATGTC +
Preference number: 6 (lower is better)
Translates to: SHSPCMAVIVIF*TDPLSHPELHV
Trigger: GACATGTAGCTCCGGGTGGGACAGCGGGTCAGTGCAGAATATGACAATCACAGCCATGCAGGGACTATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540470.5
CDS CCA 72 bp ACTGACCCGCTGTCCCACCCGGAGCTACATGTCCGGTaGAGACTCTTTAGAGAGCTTTTTCCCTTTTGTGCC +
Preference number: 6 (lower is better)
Translates to: TDPLSHPELHVR*RLFRELFPFCA
Trigger: GGCACAAAAGGGAAAAAGCTCTCTAAAGAGTCTCCACCGGACATGTAGCTCCGGGTGGGACAGCGGGTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540470.5
CDS CAA 72 bp TCCTCTGGTTGTAAGAGGCTAGTTTATCTGCGAGTCTaGCTGGGACGTAGGCTTGCTCCTACCGCCTCTGGC +
Preference number: 6 (lower is better)
Translates to: SSGCKRLVYLRV*LGRRLAPTASG
Trigger: GCCAGAGGCGGTAGGAGCAAGCCTACGTCCCAGCAAGACTCGCAGATAAACTAGCCTCTTACAACCAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476830.6
CDS GCA 72 bp CCTGGGGAGCAGGGCTCATTTCCTAAATGTTCACTCTaGACGACAGCAGGGGGCGCCAGAGAGAAATTAGTT +
Preference number: 6 (lower is better)
Translates to: PGEQGSFPKCSL*TTAGGAREKLV
Trigger: AACTAATTTCTCTCTGGCGCCCCCTGCTGTCGTGCAGAGTGAACATTTAGGAAATGAGCCCTGCTCCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540470.5
CDS CAA 90 bp AGAACCCCAGCTGTTACCGCTATTCATATTCCAACAGCCTCCAGATaGCTCGAGGCCACCTGGTTGACTTTTGCCTTGGAGTCGGTCCAG +
Preference number: 6 (lower is better)
Translates to: RTPAVTAIHIPTASR*LEATWLTFALESVQ
Trigger: CTGGACCGACTCCAAGGCAAAAGTCAACCAGGTGGCCTCGAGCAATCTGGAGGCTGTTGGAATATGAATAGCGGTAACAGCTGGGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313640.11
CDS GCA 72 bp TTCTGCTCCTTCCACTTCTCCAGGTTGGCCAGCTCCTaGTCCGCAACTAAGCCAGGCGAGAAATATCAAATC +
Preference number: 6 (lower is better)
Translates to: FCSFHFSRLASS*SATKPGEKYQI
Trigger: GATTTGATATTTCTCGCCTGGCTTAGTTGCGGAGCAGGAGCTGGCCAACCTGGAGAAGTGGAAGGAGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540470.5
CDS CCA 72 bp CATATTCCAACAGCCTCCAGATTGCTCGAGGCCACCTaGTTGACTTTTGCCTTGGAGTCGGTCCAGAAAAGC +
Preference number: 6 (lower is better)
Translates to: HIPTASRLLEAT*LTFALESVQKS
Trigger: GCTTTTCTGGACCGACTCCAAGGCAAAAGTCAACCAGGTGGCCTCGAGCAATCTGGAGGCTGTTGGAATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313624.12
ENST00000313640.11
ENST00000398762.7
ENST00000535677.5
ENST00000540470.5
CDS CAA 90 bp TATACCCCAGCTGTTACCGCTATTCATATTCCAACAGCCTCCAGATaGCTCGAGGCCACCTGGTTGACTTTTGCCTTGGAGTCGGTCCAG +
Preference number: 6 (lower is better)
Translates to: YTPAVTAIHIPTASR*LEATWLTFALESVQ
Trigger: CTGGACCGACTCCAAGGCAAAAGTCAACCAGGTGGCCTCGAGCAATCTGGAGGCTGTTGGAATATGAATAGCGGTAACAGCTGGGGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313624.12
ENST00000398762.7
ENST00000540470.5
CDS CAA 90 bp CCAACAGCCTCCAGATTGCTCGAGGCCACCTGGTTGACTTTTGCCTaGGAGTCGGTCCAGAAAAGCATTATTTACCCTCCTGTGTTCAGT +
Preference number: 6 (lower is better)
Translates to: PTASRLLEATWLTFA*ESVQKSIIYPPVFS
Trigger: ACTGAACACAGGAGGGTAAATAATGCTTTTCTGGACCGACTCCAAGGCAAAAGTCAACCAGGTGGCCTCGAGCAATCTGGAGGCTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313624.12
ENST00000313640.11
ENST00000398762.7
ENST00000535677.5
ENST00000540470.5
CDS TCA 72 bp GCCCATGTTGAGGATTGTGGGCCACAAACAGCACTTTaGCAGGCACTTCTGTCTGGCGATTCTGTGTTCAGT +
Preference number: 6 (lower is better)
Translates to: AHVEDCGPQTAL*QALLSGDSVFS
Trigger: ACTGAACACAGAATCGCCAGACAGAAGTGCCTGTCAAAGTGCTGTTTGTGGCCCACAATCCTCAACATGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313624.12
CDS GCA 72 bp AGCCTCCAGATTGCTCGAGGCCACCTGGTTGACTTTTaGCTTGGAGTCGGTCCAGAAAAGCATTATTTACCC +
Preference number: 6 (lower is better)
Translates to: SLQIARGHLVDF*LGVGPEKHYLP
Trigger: GGGTAAATAATGCTTTTCTGGACCGACTCCAAGGCAAAAGTCAACCAGGTGGCCTCGAGCAATCTGGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313624.12
ENST00000313640.11
ENST00000398762.7
ENST00000535677.5
ENST00000540470.5
CDS CAA 72 bp ATTCCAACAGCCTCCAGATTGCTCGAGGCCACCTGGTaGACTTTTGCCTTGGAGTCGGTCCAGAAAAGCATT +
Preference number: 6 (lower is better)
Translates to: IPTASRLLEATW*TFALESVQKSI
Trigger: AATGCTTTTCTGGACCGACTCCAAGGCAAAAGTCAACCAGGTGGCCTCGAGCAATCTGGAGGCTGTTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313624.12
ENST00000313640.11
ENST00000398762.7
ENST00000535677.5
ENST00000540470.5
CDS CAA 72 bp GCTGTTACCGCTATTCATATTCCAACAGCCTCCAGATaGCTCGAGGCCACCTGGTTGACTTTTGCCTTGGAG +
Preference number: 6 (lower is better)
Translates to: AVTAIHIPTASR*LEATWLTFALE
Trigger: CTCCAAGGCAAAAGTCAACCAGGTGGCCTCGAGCAATCTGGAGGCTGTTGGAATATGAATAGCGGTAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313624.12
ENST00000313640.11
ENST00000398762.7
ENST00000535677.5
ENST00000540470.5
CDS CAA 90 bp GCTCCTGCTCCGCAATTCTTTGTATCTCATTTCTCCGGTTTATATTaGGTGCTATCAAGGTGTATGCACTTGTGCGCCTCTGGCCCGCGT +
Preference number: 6 (lower is better)
Translates to: APAPQFFVSHFSGLY*VLSRCMHLCASGPR
Trigger: ACGCGGGCCAGAGGCGCACAAGTGCATACACCTTGATAGCACCAAATATAAACCGGAGAAATGAGATACAAAGAATTGCGGAGCAGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313624.12
ENST00000313640.11
ENST00000398762.7
CDS CCA 72 bp TGGGCCACAAACAGCACTTTGACAGGCACTTCTGTCTaGCGATTCTGTGTTCAGTTTGCTCAAGAACTCAGC +
Preference number: 6 (lower is better)
Translates to: WATNSTLTGTSV*RFCVQFAQELS
Trigger: GCTGAGTTCTTGAGCAAACTGAACACAGAATCGCCAGACAGAAGTGCCTGTCAAAGTGCTGTTTGTGGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000313624.12
ENST00000313640.11
ENST00000398762.7
ENST00000476830.6
ENST00000540470.5
CDS CAA 72 bp TCCAGATTGCTCGAGGCCACCTGGTTGACTTTTGCCTaGGAGTCGGTCCAGAAAAGCATTATTTACCCTCCT +
Preference number: 6 (lower is better)
Translates to: SRLLEATWLTFA*ESVQKSIIYPP
Trigger: AGGAGGGTAAATAATGCTTTTCTGGACCGACTCCAAGGCAAAAGTCAACCAGGTGGCCTCGAGCAATCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313624.12
ENST00000313640.11
ENST00000398762.7
ENST00000535677.5
ENST00000540470.5
CDS TCA 72 bp TTCCATGTTGAGGATTGTGGGCCACAAACAGCACTTTaGCAGGCACTTCTGTCTGGCGATTCTGTGTTCAGT +
Preference number: 6 (lower is better)
Translates to: FHVEDCGPQTAL*QALLSGDSVFS
Trigger: ACTGAACACAGAATCGCCAGACAGAAGTGCCTGTCAAAGTGCTGTTTGTGGCCCACAATCCTCAACATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313640.11
ENST00000398762.7
ENST00000476830.6
ENST00000540470.5
CDS CAA 90 bp GCTATTCATATTCCAACAGCCTCCAGATTGCTCGAGGCCACCTGGTaGACTTTTGCCTTGGAGTCGGTCCAGAAAAGCATTATTTACCCT +
Preference number: 6 (lower is better)
Translates to: AIHIPTASRLLEATW*TFALESVQKSIIYP
Trigger: AGGGTAAATAATGCTTTTCTGGACCGACTCCAAGGCAAAAGTCAACCAGGTGGCCTCGAGCAATCTGGAGGCTGTTGGAATATGAATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313624.12
ENST00000313640.11
ENST00000398762.7
ENST00000535677.5
ENST00000540470.5
CDS GCA 72 bp GACAGGCACTTCTGTCTGGCGATTCTGTGTTCAGTTTaGTCAAGAACTCAGCGGTTTTGTATTGCTGATGCT +
Preference number: 6 (lower is better)
Translates to: DRHFCLAILCSV*SRTQRFCIADA
Trigger: AGCATCAGCAATACAAAACCGCTGAGTTCTTGAGCAAACTGAACACAGAATCGCCAGACAGAAGTGCCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313624.12
ENST00000313640.11
ENST00000398762.7
ENST00000476830.6
ENST00000540470.5
CDS CAA 90 bp GCTCCTGCTCCGCAATTCTTTGTATCTCATTTCTCCGGTTTATATTaGGTGCTATCAAGGTGTATGCACTTGTGCTCCTCACTCTCTCAG +
Preference number: 6 (lower is better)
Translates to: APAPQFFVSHFSGLY*VLSRCMHLCSSLSQ
Trigger: CTGAGAGAGTGAGGAGCACAAGTGCATACACCTTGATAGCACCAAATATAAACCGGAGAAATGAGATACAAAGAATTGCGGAGCAGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476830.6
ENST00000537828.5
CDS CCA 72 bp TCCAGAAAAGCATTATTTACCCTCCTGTGTTCAGTCTaGTGGATTTTGGCTCTTTCTTGCTCTTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SRKALFTLLCSV*WILALSCSCCC
Trigger: GCAGCAGCAAGAGCAAGAAAGAGCCAAAATCCACCAGACTGAACACAGGAGGGTAAATAATGCTTTTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000313624.12
ENST00000313640.11
ENST00000398762.7
ENST00000535677.5
ENST00000540470.5
CDS CAA 90 bp TCCAGAAAAGCATTATTTACCCTCCTGTGTTCAGTCTGGTGGATTTaGGCTCTTTCTTGCTCTTGCTGCTGCCGTTTCAGTTCCAGTAAT +
Preference number: 6 (lower is better)
Translates to: SRKALFTLLCSVWWI*ALSCSCCCRFSSSN
Trigger: ATTACTGGAACTGAAACGGCAGCAGCAAGAGCAAGAAAGAGCCAAAATCCACCAGACTGAACACAGGAGGGTAAATAATGCTTTTCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000313624.12
ENST00000313640.11
ENST00000398762.7
ENST00000535677.5
ENST00000540470.5
CDS CAA 90 bp AATGACTATACATACTTCTTTGTATCTCATTTCTCCGGTTTATATTaGGTGCTATCAAGGTGTATGCACTTGTGCGCCTCTGGCCCGCGT +
Preference number: 6 (lower is better)
Translates to: NDYTYFFVSHFSGLY*VLSRCMHLCASGPR
Trigger: ACGCGGGCCAGAGGCGCACAAGTGCATACACCTTGATAGCACCAAATATAAACCGGAGAAATGAGATACAAAGAAGTATGTATAGTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540470.5
CDS TCA 72 bp CATTCTCACCAAGAGTCAGCACAGAGGGTTCGAATTTaGAAAACCACCTGGGCTCCTACTAAAAGAAGTATA +
Preference number: 6 (lower is better)
Translates to: HSHQESAQRVRI*KTTWAPTKRSI
Trigger: TATACTTCTTTTAGTAGGAGCCCAGGTGGTTTTTCAAATTCGAACCCTCTGTGCTGACTCTTGGTGAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540470.5
CDS TCA 72 bp TTTCCACACATAGGTAAACATATCCCCAGAGAATTCTaGTGCCCATACTCGCTTTATCTTCAATGCTCCCAA +
Preference number: 6 (lower is better)
Translates to: FPHIGKHIPREF*CPYSLYLQCSQ
Trigger: TTGGGAGCATTGAAGATAAAGCGAGTATGGGCATCAGAATTCTCTGGGGATATGTTTACCTATGTGTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536042.1
ENST00000540470.5