RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPS8L3 (Homo sapiens)

Ensembl gene IDs: ENSG00000198758

Ensembl transcript IDs: ENST00000361852.8, ENST00000361965.9, ENST00000369805.7, ENST00000472325.5, ENST00000475725.1, ENST00000477568.1, ENST00000482453.1, ENST00000489465.1, ENST00000498743.1

Found 523 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGCTTGGCTGGAGGGCTCTGGAAGTTGCCAGTCATCTGAGAATGTaGGTTGGTAGGGCAGGGGCTCATCGCCTGTCCAGTCGGCCCGGC +
Preference number: 1 (lower is better)
Translates to: VLGWRALEVASHLRM*VGRAGAHRLSSRPG
Trigger: GCCGGGCCGACTGGACAGGCGATGAGCCCCTGCCCTACCAACCCACATTCTCAGATGACTGGCAACTTCCAGAGCCCTCCAGCCAAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR CCA 90 bp ACCCCGACCTCCAACTCAAGACTTAGGGCTCTGGATAGTCCAGGCTaGGTAGTACCCGAGAGGGTGACTGGCCCTGGGTCCCAGGGGTCC +
Preference number: 1 (lower is better)
Translates to: TPTSNSRLRALDSPG*VVPERVTGPGSQGS
Trigger: GGACCCCTGGGACCCAGGGCCAGTCACCCTCTCGGGTACTACCCAGCCTGGACTATCCAGAGCCCTAAGTCTTGAGTTGGAGGTCGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR GCA 90 bp GTCCCTGACCTGCAGGATCAAGTCTTGGCTCCACACCCGGCCCTGTaGATCCATCTCGAACAGCTTCTGCAAGGCATCCTCGGGCCCCTG +
Preference number: 1 (lower is better)
Translates to: VPDLQDQVLAPHPAL*IHLEQLLQGILGPL
Trigger: CAGGGGCCCGAGGATGCCTTGCAGAAGCTGTTCGAGATGGATGCACAGGGCCGGGTGTGGAGCCAAGACTTGATCCTGCAGGTCAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR CCA 90 bp TCCAGCAGCTGCAGCCAGCCGTCCCTGACCTGCAGGATCAAGTCTTaGCTCCACACCCGGCCCTGTGCATCCATCTCGAACAGCTTCTGC +
Preference number: 1 (lower is better)
Translates to: SSSCSQPSLTCRIKS*LHTRPCASISNSFC
Trigger: GCAGAAGCTGTTCGAGATGGATGCACAGGGCCGGGTGTGGAGCCAAGACTTGATCCTGCAGGTCAGGGACGGCTGGCTGCAGCTGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR CCA 90 bp CTCTGCCCCCACTTCCTGGCACTGGAAGAGCAGAGTGCTAGTGCCTaGCAGGCCCGGCTCCTGCACGGTGATGGACAGGATGGAGTTGTA +
Preference number: 1 (lower is better)
Translates to: LCPHFLALEEQSASA*QARLLHGDGQDGVV
Trigger: TACAACTCCATCCTGTCCATCACCGTGCAGGAGCCGGGCCTGCCAGGCACTAGCACTCTGCTCTTCCAGTGCCAGGAAGTGGGGGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR TCA 90 bp ATCTCGAACAGCTTCTGCAAGGCATCCTCGGGCCCCTGGACTCTCTaGCTCCCCTGCTTGCATGTCATCAAGTGCTGCAGGGAGAGGGGG +
Preference number: 1 (lower is better)
Translates to: ISNSFCKASSGPWTL*LPCLHVIKCCRERG
Trigger: CCCCCTCTCCCTGCAGCACTTGATGACATGCAAGCAGGGGAGTCAGAGAGTCCAGGGGCCCGAGGATGCCTTGCAGAAGCTGTTCGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR GCA 90 bp GGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTaGTTCAGCCTCTGGGCCTGTCCATTGTTTTTGCTGTGTGAGCTG +
Preference number: 1 (lower is better)
Translates to: GGYWGGSNTARRDTV*FSLWACPLFLLCEL
Trigger: CAGCTCACACAGCAAAAACAATGGACAGGCCCAGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
3UTR GCA 90 bp GGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTaGCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTGTCTAAGC +
Preference number: 1 (lower is better)
Translates to: GIQKRNSRGSNGYQI*HLASAGPGSWRCLS
Trigger: GCTTAGACACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
3UTR CCA 90 bp GTCCAGAACCTCCAGCTTCTCTCCCTGGACCACAGTCAGTTCCCGTaGGTTCCTAGCTTCAAACTCGTACAAGACTTGCATTTTCAGGGC +
Preference number: 1 (lower is better)
Translates to: VQNLQLLSLDHSQFP*VPSFKLVQDLHFQG
Trigger: GCCCTGAAAATGCAAGTCTTGTACGAGTTTGAAGCTAGGAACCCACGGGAACTGACTGTGGTCCAGGGAGAGAAGCTGGAGGTTCTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR GCA 90 bp AGGCCCCCTCCATCTGTCCTGGCCTGGCTGAAGGCCTCCAAGTCGAGGTCTGCTTCAATGTCCAGCAGCTaGAGCCAGCCGTCCCTGACC +
Preference number: 2 (lower is better)
Translates to: RPPPSVLAWLKASKSRSASMSSS*SQPSLT
Trigger: GGTCAGGGACGGCTGGCTGCAGCTGCTGGACATTGA...AGCAGACCTCGACTTGGAGGCCTTCAGCCAGGCCAGGACAGATGGAGGGGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR CAA 90 bp GTCCAGCAGCTGCAGCCAGCCGTCCCTGACCTGCAGGATCAAGTCTaGGCTCCACACCCGGCCCTGTGCATCCATCTCGAACAGCTTCTG +
Preference number: 2 (lower is better)
Translates to: VQQLQPAVPDLQDQV*APHPALCIHLEQLL
Trigger: CAGAAGCTGTTCGAGATGGATGCACAGGGCCGGGTGTGGAGCCAAGACTTGATCCTGCAGGTCAGGGACGGCTGGCTGCAGCTGCTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR TCA 90 bp ATAGCTTTAGGGGTGAGGAGGGGTGAGATCACTTGGGCTGCTAGGCCAGCCTCACTGTCCTGGCCTGGCTaGAGGCCTCCAAGTCGAGGT +
Preference number: 2 (lower is better)
Translates to: IALGVRRGEITWAARPASLSWPG*RPPSRG
Trigger: ACCTCGACTTGGAGGCCTTCAGCCAGGCCAGGACAG...TGAGGCTGGCCTAGCAGCCCAAGTGATCTCACCCCTCCTCACCCCTAAAGCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR GCA 90 bp CAGGCTGGGCCCAACCCCATCCAAAGGTTACTCTCAGGTGGGCTTAGACAGGACGGGGACCATGGACTGTaGTCTAGGGTCCTCTGGTGG +
Preference number: 2 (lower is better)
Translates to: QAGPNPIQRLLSGGLRQDGDHGL*SRVLWW
Trigger: CCACCAGAGGACCCTAGAGCACAGTCCATGGTCCCC...GTCCTGTCTAAGCCCACCTGAGAGTAACCTTTGGATGGGGTTGGGCCCAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR CCA 90 bp TGTTGCTTGGAATGTAGCCGCTCCGTCCCGCCTCATTCTTCACCAGCCACCACCTTCCTCGTCCCTCTCTaGGTCCTCGGGGGAAGAGGA +
Preference number: 2 (lower is better)
Translates to: CCLECSRSVPPHSSPATTFLVPL*VLGGRG
Trigger: TCCTCTTCCCCCGAGGACCCAGAGAGGGACGAGGAA...GGTGGTGGCTGGTGAAGAATGAGGCGGGACGGAGCGGCTACATTCCAAGCAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR CCA 90 bp GTGTACGAGCTCAGGGGCACTTGTCTCCTTCAGCCAGGTGGCCAGCCTTCCCAGTCAATGTACTGTGCCTaGGTGAGACCTCCCTGGTCC +
Preference number: 2 (lower is better)
Translates to: VYELRGTCLLQPGGQPSQSMYCA*VRPPWS
Trigger: GGACCAGGGAGGTCTCACCCAGGCACAGTACATTGA...CTGGGAAGGCTGGCCACCTGGCTGAAGGAGACAAGTGCCCCTGAGCTCGTACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR CCA 90 bp GTTGCCAGTCATCTGAGAATGTGGGTTGGTAGGGCAGGGGCTCATCGCCTGTCCGCTAGTGGTCCAGGCTaGGCCCAACCCCATCCAAAG +
Preference number: 2 (lower is better)
Translates to: VASHLRMWVGRAGAHRLSASGPG*AQPHPK
Trigger: CTTTGGATGGGGTTGGGCCCAGCCTGGACCACTAGC...GGACAGGCGATGAGCCCCTGCCCTACCAACCCACATTCTCAGATGACTGGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR TCA 90 bp AAGGGTGCTTGGCTGGAGGGCTCTGGAAGTTGCCAGTCATCTGAGAATGTGGGTGGCCCCTGGACTCTCTaGCTCCCCTGCTTGCATGTC +
Preference number: 2 (lower is better)
Translates to: KGAWLEGSGSCQSSENVGGPWTL*LPCLHV
Trigger: GACATGCAAGCAGGGGAGTCAGAGAGTCCAGGGGCC...ACCCACATTCTCAGATGACTGGCAACTTCCAGAGCCCTCCAGCCAAGCACCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR CCA 90 bp TGCTGTGGTCCAGAACCTCCAGCTTCTCTCCCTGGACCACAGTCAGTTCCCGTGGGAAGAGGACCGCCTTaGAGGAGGCAGAGTAAAGGC +
Preference number: 2 (lower is better)
Translates to: CCGPEPPASLPGPQSVPVGRGPP*RRQSKG
Trigger: GCCTTTACTCTGCCTCCTCCAAGGCGGTCCTCTTCC...CACGGGAACTGACTGTGGTCCAGGGAGAGAAGCTGGAGGTTCTGGACCACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR GCA 90 bp TTGAAGAGGATGTGTACGAGCTCAGGGGCACTTGTCTCCTTCAGCCAGGTGGCCCCACACCCGGCCCTGTaGATCCATCTCGAACAGCTT +
Preference number: 2 (lower is better)
Translates to: LKRMCTSSGALVSFSQVAPHPAL*IHLEQL
Trigger: AAGCTGTTCGAGATGGATGCACAGGGCCGGGTGTGG...GGCCACCTGGCTGAAGGAGACAAGTGCCCCTGAGCTCGTACACATCCTCTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR GCA 90 bp ACCTCCAACTCAAGACTTAGGGCTCTGGATAGTCCAGGCTGGGTAGTACCCGAGGGATGGTGGGAGGCCTaGAGTGTAAGGGGACCATGG +
Preference number: 2 (lower is better)
Translates to: TSNSRLRALDSPGWVVPEGWWEA*SVRGPW
Trigger: CCATGGTCCCCTTACACTGCAGGCCTCCCACCATCC...CTCGGGTACTACCCAGCCTGGACTATCCAGAGCCCTAAGTCTTGAGTTGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR GCA 90 bp TGTTGCTTGGAATGTAGCCGCTCCGTCCCGCCTCATTCTTCACCAGCCACCACCGCAGTCAATGTACTGTaGCTGGGTGAGACCTCCCTG +
Preference number: 2 (lower is better)
Translates to: CCLECSRSVPPHSSPATTAVNVL*LGETSL
Trigger: CAGGGAGGTCTCACCCAGGCACAGTACATTGACTGC...GGTGGTGGCTGGTGAAGAATGAGGCGGGACGGAGCGGCTACATTCCAAGCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR CCA 90 bp AGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGGCGGGGCCTGGTTCTTaGAGGTGTCTAAGCTGGTGC +
Preference number: 2 (lower is better)
Translates to: RWLLGRLQHSQKGHCLLQAGPGS*RCLSWC
Trigger: GCACCAGCTTAGACACCTCCAAGAACCAGGCCCCGC...CTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
3UTR-3UTR CCA 90 bp TGTCCTGGCCTGGCTGAAGGCCTCCAAGTCGAGGTCTGCTTTGCTCCAGCTCTTCCCACTTCCTGGCACTaGAAGAGCAGAGTGCTAGTG +
Preference number: 2 (lower is better)
Translates to: CPGLAEGLQVEVCFAPALPTSWH*KSRVLV
Trigger: CACTAGCACTCTGCTCTTCCAGTGCCAGGAAGTGGG...AAGAGCTGGAGCAAAGCAGACCTCGACTTGGAGGCCTTCAGCCAGGCCAGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR GCA 90 bp CAGGGACTTGAAGAGGATGTGTACGAGCTCAGGGGCACTTGTCTCCTTCAGCCATCCTCCAGAGCCTTCTaGAGGCTGGTCTTCAGTCGC +
Preference number: 2 (lower is better)
Translates to: QGLEEDVYELRGTCLLQPSSRAF*RLVFSR
Trigger: GCGACTGAAGACCAGCCTGCAGAAGGCTCTGGAGGA...TGGCTGAAGGAGACAAGTGCCCCTGAGCTCGTACACATCCTCTTCAAGTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR CCA 90 bp ACCTCCAACTCAAGACTTAGGGCTCTGGATAGTCCAGGCTGGGTAGTACCCGAGTGCAGGATCAAGTCTTaGCTCCACACCCGGCCCTGT +
Preference number: 2 (lower is better)
Translates to: TSNSRLRALDSPGWVVPECRIKS*LHTRPC
Trigger: ACAGGGCCGGGTGTGGAGCCAAGACTTGATCCTGCA...CTCGGGTACTACCCAGCCTGGACTATCCAGAGCCCTAAGTCTTGAGTTGGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR CCA 90 bp AATACGGTCCGAATCAAACCAAGACTATCTCCTCTGCTTGCCACTGAATCCTCCCTGGCTGGGCAGGTTTaGGGCTGGAGGGCCGAAGGG +
Preference number: 2 (lower is better)
Translates to: NTVRIKPRLSPLLATESSLAGQV*GWRAEG
Trigger: CCCTTCGGCCCTCCAGCCCCAAACCTGCCCAGCCAG...GGAGGATTCAGTGGCAAGCAGAGGAGATAGTCTTGGTTTGATTCGGACCGTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR GCA 90 bp ATAGCTTTAGGGGTGAGGAGGGGTGAGATCACTTGGGCTGCTAGGCCAGCCTCACTCCAAGTCGAGGTCTaGTTTGCTCCAGCTCTTCCT +
Preference number: 2 (lower is better)
Translates to: IALGVRRGEITWAARPASLQVEV*FAPALP
Trigger: AGGAAGAGCTGGAGCAAAGCAGACCTCGACTTGGAG...TGAGGCTGGCCTAGCAGCCCAAGTGATCTCACCCCTCCTCACCCCTAAAGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR GCA 90 bp GCTCTGGAAGTTGCCAGTCATCTGAGAATGTGGGTTGGTAGGGCAGGGGCTCATTTGCATGTCATCAAGTaGTGCAGGGAGAGGGGGAGT +
Preference number: 2 (lower is better)
Translates to: ALEVASHLRMWVGRAGAHLHVIK*CRERGS
Trigger: ACTCCCCCTCTCCCTGCAGCACTTGATGACATGCAA...ATGAGCCCCTGCCCTACCAACCCACATTCTCAGATGACTGGCAACTTCCAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR CCA 90 bp AAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCGCGGGGCCTGGTTCTTaGAGGTGTCTAAGCTGGTGC +
Preference number: 2 (lower is better)
Translates to: KLGSRRGILGALMGIRSAAGPGS*RCLSWC
Trigger: GCACCAGCTTAGACACCTCCAAGAACCAGGCCCCGC...GGCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
3UTR-3UTR CCA 90 bp TTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGGCGGGGCCTGGTTCTTaGAGGTGTCTAAGCTGGTGC +
Preference number: 2 (lower is better)
Translates to: LLQTGIQKRNSRGSNGYQAGPGS*RCLSWC
Trigger: GCACCAGCTTAGACACCTCCAAGAACCAGGCCCCGC...CTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
3UTR-3UTR CCA 90 bp GCATGCAATAATACGGTCCGAATCAAACCAAGACTATCTCCTCTGCTTGCCACTCAGAGTGCTAGTGCCTaGCAGGCCCGGCTCCTGCAC +
Preference number: 2 (lower is better)
Translates to: ACNNTVRIKPRLSPLLATQSASA*QARLLH
Trigger: GTGCAGGAGCCGGGCCTGCCAGGCACTAGCACTCTG...AGTGGCAAGCAGAGGAGATAGTCTTGGTTTGATTCGGACCGTATTATTGCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR CCA 90 bp CACAGTCAGTTCCCGTGGGTTCCTAGCTTCAAACTCGTACAAGACTTGCATTTTTTGGTTCTCGGGCACTaGTGTGGCGTGGCAGGGGCC +
Preference number: 2 (lower is better)
Translates to: HSQFPWVPSFKLVQDLHFLVLGH*CGVAGA
Trigger: GGCCCCTGCCACGCCACACCAGTGCCCGAGAACCAA...AAAATGCAAGTCTTGTACGAGTTTGAAGCTAGGAACCCACGGGAACTGACTGTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR TCA 90 bp TTGAAGAGGATGTGTACGAGCTCAGGGGCACTTGTCTCCTTCAGCCAGGTGGCCTCTCCAGCTTTCCCATaGACAGCTCAATGTCCCTTA +
Preference number: 2 (lower is better)
Translates to: LKRMCTSSGALVSFSQVASPAFP*TAQCPL
Trigger: TAAGGGACATTGAGCTGTTCATGGGAAAGCTGGAGA...GGCCACCTGGCTGAAGGAGACAAGTGCCCCTGAGCTCGTACACATCCTCTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR GCA 90 bp GTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTAATGGGTATCAGATCTaGCATCTTGCATCAGCGGGG +
Preference number: 2 (lower is better)
Translates to: VTGEAPTQPEGTLFASASNGYQI*HLASAG
Trigger: CCCCGCTGATGCAAGATGGCAGATCTGATACCCATT...AGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
3UTR-3UTR GCA 90 bp GTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTCCTGTCCATTGTTTTTaGTGTGTGAGCTGGGGTGTG +
Preference number: 2 (lower is better)
Translates to: VTGEAPTQPEGTLFASASPVHCF*CVSWGV
Trigger: CACACCCCAGCTCACACAGCAAAAACAATGGACAGG...AGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
3UTR-3UTR GCA 90 bp TTGAAGAGGATGTGTACGAGCTCAGGGGCACTTGTCTCCTTCAGCCAGGTGGCCAGGAGGTTGAAGCTGTaGTTGATCTTCTGGAAGCAG +
Preference number: 2 (lower is better)
Translates to: LKRMCTSSGALVSFSQVARRLKL*LIFWKQ
Trigger: CTGCTTCCAGAAGATCAAGCACAGCTTCAACCTCCT...GGCCACCTGGCTGAAGGAGACAAGTGCCCCTGAGCTCGTACACATCCTCTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR CCA 90 bp TACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTGGGGGTTTGCTGCAAACTaGGATCCAGAAGAGGAATTC +
Preference number: 2 (lower is better)
Translates to: YWGGSNTARRDTVCFSLWGFAAN*DPEEEF
Trigger: GAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCC...CCAGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
3UTR-3UTR CCA 90 bp GCATGCAATAATACGGTCCGAATCAAACCAAGACTATCTCCTCTGCTTGCCACTGGGCCTTGGGGATGGTaGGAGGCCTGCAGTGTAAGG +
Preference number: 2 (lower is better)
Translates to: ACNNTVRIKPRLSPLLATGPWGW*EACSVR
Trigger: CCTTACACTGCAGGCCTCCCACCATCCCCAAGGCCC...AGTGGCAAGCAGAGGAGATAGTCTTGGTTTGATTCGGACCGTATTATTGCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR CCA 90 bp GCATGCAATAATACGGTCCGAATCAAACCAAGACTATCTCCTCTGCTTGCCACTCAGGGGCCTTGGGGATaGTGGGAGGCCTGCAGTGTA +
Preference number: 2 (lower is better)
Translates to: ACNNTVRIKPRLSPLLATQGPWG*WEACSV
Trigger: TACACTGCAGGCCTCCCACCATCCCCAAGGCCCCTG...AGTGGCAAGCAGAGGAGATAGTCTTGGTTTGATTCGGACCGTATTATTGCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR CAA 90 bp ATCCAAAGGTTACTCTCAGGTGGGCTTAGACAGGACTGTAGCAGGTaGATAGCTTTAGGGGTGAGGAGGGGTGAGATCACTTGGGCTGCT +
Preference number: 2 (lower is better)
Translates to: IQRLLSGGLRQDCSR*IALGVRRGEITWAA
Trigger: AGCAGCCCAAGTGATCTCACCCCTCCTCACCCCTAAAGCTATCAACCTGCTACAGTCCTGTCTAAGCCCACCTGAGAGTAACCTTTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR TCA 90 bp CACAGTCAGTTCCCGTGGGTTCCTAGCTTCAAACTCGTACAAGACTTGCATTTTGCAGCCAGCCGTCCCTaGCCTGCAGGATCAAGTCTT +
Preference number: 2 (lower is better)
Translates to: HSQFPWVPSFKLVQDLHFAASRP*PAGSSL
Trigger: AAGACTTGATCCTGCAGGTCAGGGACGGCTGGCTGC...AAAATGCAAGTCTTGTACGAGTTTGAAGCTAGGAACCCACGGGAACTGACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR CCA 90 bp AAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCTGCATCAGCGGGGCCTaGTTCTTGGAGGTGTCTAAG +
Preference number: 2 (lower is better)
Translates to: KLGSRRGILGALMGIRSACISGA*FLEVSK
Trigger: CTTAGACACCTCCAAGAACCAGGCCCCGCTGATGCA...GGCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
3UTR-3UTR CCA 90 bp CAGGGACTTGAAGAGGATGTGTACGAGCTCAGGGGCACTTGTCTCCTTCAGCCAATTTCTTCTTCCTGCTaGTCTTTGCCTGGGCCTTCT +
Preference number: 2 (lower is better)
Translates to: QGLEEDVYELRGTCLLQPISSSC*SLPGPS
Trigger: AGAAGGCCCAGGCAAAGACCAGCAGGAAGAAGAAAT...TGGCTGAAGGAGACAAGTGCCCCTGAGCTCGTACACATCCTCTTCAAGTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR CCA 90 bp CACAGTCAGTTCCCGTGGGTTCCTAGCTTCAAACTCGTACAAGACTTGCATTTTTCTCCTTCAGCCAGGTaGCCAGCCTTCCCAGGAGGT +
Preference number: 2 (lower is better)
Translates to: HSQFPWVPSFKLVQDLHFSPSAR*PAFPGG
Trigger: ACCTCCTGGGAAGGCTGGCCACCTGGCTGAAGGAGA...AAAATGCAAGTCTTGTACGAGTTTGAAGCTAGGAACCCACGGGAACTGACTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR CCA 90 bp GCATGCAATAATACGGTCCGAATCAAACCAAGACTATCTCCTCTGCTTGCCACTTCTGCCCCCACTTCCTaGCACTGGAAGAGCAGAGTG +
Preference number: 2 (lower is better)
Translates to: ACNNTVRIKPRLSPLLATSAPTS*HWKSRV
Trigger: CACTCTGCTCTTCCAGTGCCAGGAAGTGGGGGCAGA...AGTGGCAAGCAGAGGAGATAGTCTTGGTTTGATTCGGACCGTATTATTGCATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR CCA 90 bp GCATGCAATAATACGGTCCGAATCAAACCAAGACTATCTCCTCTGCTTGCCACTCACCACCGCTTGCTGTaGTCCAGAACCTCCAGCTTC +
Preference number: 2 (lower is better)
Translates to: ACNNTVRIKPRLSPLLATHHRLL*SRTSSF
Trigger: GAAGCTGGAGGTTCTGGACCACAGCAAGCGGTGGTG...AGTGGCAAGCAGAGGAGATAGTCTTGGTTTGATTCGGACCGTATTATTGCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR GCA 90 bp TTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCTCAGATCTGCCATCTTaGATCAGCGGGGCCTGGTTC +
Preference number: 2 (lower is better)
Translates to: LRRRGTEQILDKPRHKCSSDLPS*ISGAWF
Trigger: GAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGA...GGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
3UTR-3UTR GCA 90 bp AATACGGTCCGAATCAAACCAAGACTATCTCCTCTGCTTGCCACTGAATCCTCCAGTCGAGGTCTGCTTTaGTCCAGCTCTTCCTCCAGA +
Preference number: 2 (lower is better)
Translates to: NTVRIKPRLSPLLATESSSRGLL*SSSSSR
Trigger: TCTGGAGGAAGAGCTGGAGCAAAGCAGACCTCGACT...GGAGGATTCAGTGGCAAGCAGAGGAGATAGTCTTGGTTTGATTCGGACCGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR GCA 90 bp CAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGGTTTGGGAAAGAGGTAAAATCAGATCTGCCATCTTaGATCAGCGGGGCCTGGTTC +
Preference number: 2 (lower is better)
Translates to: QILDKPRHKCSRFGKEVKSDLPS*ISGAWF
Trigger: GAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGA...TTTTACCTCTTTCCCAAACCTGGAGCATTTATGCCTAGGCTTGTCAAGAATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
3UTR-3UTR CCA 90 bp GCATGCAATAATACGGTCCGAATCAAACCAAGACTATCTCCTCTGCTTGCCACTCACAGTCAGTTCCCGTaGGTTCCTAGCTTCAAACTC +
Preference number: 2 (lower is better)
Translates to: ACNNTVRIKPRLSPLLATHSQFP*VPSFKL
Trigger: GAGTTTGAAGCTAGGAACCCACGGGAACTGACTGTG...AGTGGCAAGCAGAGGAGATAGTCTTGGTTTGATTCGGACCGTATTATTGCATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR GCA 90 bp CAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGGTTTGGGAAAGAGGTAAAAAGAAGGGACACTGTTTaGTTCAGCCTCTGGGCCTGT +
Preference number: 2 (lower is better)
Translates to: QILDKPRHKCSRFGKEVKRRDTV*FSLWAC
Trigger: ACAGGCCCAGAGGCTGAAGCAAACAGTGTCCCTTCT...TTTTACCTCTTTCCCAAACCTGGAGCATTTATGCCTAGGCTTGTCAAGAATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
3UTR-3UTR CCA 90 bp TTGAAGATGCTTTTATTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTTGCATCAGCGGGGCCTaGTTCTTGGAGGTGTCTAAG +
Preference number: 2 (lower is better)
Translates to: LKMLLLRRRGTEQILDKPCISGA*FLEVSK
Trigger: CTTAGACACCTCCAAGAACCAGGCCCCGCTGATGCA...AGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAATAAAAGCATCTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
3UTR-3UTR CCA 90 bp TTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCGGGTTTGCTGCAAACTaGGATCCAGAAGAGGAATTC +
Preference number: 2 (lower is better)
Translates to: LRRRGTEQILDKPRHKCSGFAAN*DPEEEF
Trigger: GAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCC...GGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
3UTR-3UTR CCA 90 bp CAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGGTTTGGGAAAGAGGTAAAATTTTGCTGTGTGAGCTaGGGTGTGGGGTTTGCTGCA +
Preference number: 2 (lower is better)
Translates to: QILDKPRHKCSRFGKEVKFCCVS*GVGFAA
Trigger: TGCAGCAAACCCCACACCCCAGCTCACACAGCAAAA...TTTTACCTCTTTCCCAAACCTGGAGCATTTATGCCTAGGCTTGTCAAGAATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
3UTR-3UTR GCA 90 bp CAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGGTTTGGGAAAGAGGTAAAAAATGGGTATCAGATCTaGCATCTTGCATCAGCGGGG +
Preference number: 2 (lower is better)
Translates to: QILDKPRHKCSRFGKEVKNGYQI*HLASAG
Trigger: CCCCGCTGATGCAAGATGGCAGATCTGATACCCATT...TTTTACCTCTTTCCCAAACCTGGAGCATTTATGCCTAGGCTTGTCAAGAATCTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
3UTR-3UTR GCA 90 bp TTGAAGATGCTTTTATTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTGGGTGTGGGGTTTGCTaGAAACTGGGATCCAGAAGA +
Preference number: 2 (lower is better)
Translates to: LKMLLLRRRGTEQILDKPGCGVC*KLGSRR
Trigger: TCTTCTGGATCCCAGTTTGCAGCAAACCCCACACCC...AGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAATAAAAGCATCTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
3UTR-3UTR CCA 90 bp TTGAAGATGCTTTTATTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTGGGTTTGCTGCAAACTaGGATCCAGAAGAGGAATTC +
Preference number: 2 (lower is better)
Translates to: LKMLLLRRRGTEQILDKPGFAAN*DPEEEF
Trigger: GAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCC...AGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAATAAAAGCATCTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
3UTR GCA 72 bp GGGCTGTTCTGGAGGGATCCCCGGCTCCAGATAGCGTaGCTGCTCCATAGGGAGCGGCCTTTCCATAGCAGG +
Preference number: 3 (lower is better)
Translates to: GLFWRDPRLQIA*LLHRERPFHSR
Trigger: CCTGCTATGGAAAGGCCGCTCCCTATGGAGCAGGCACGCTATCTGGAGCCGGGGATCCCTCCAGAACAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR CCA 72 bp AGAGGACCGCCTTGGAGGAGGCAGAGTAAAGGCACTTaGTTCTCGGGCACTGGTGTGGCGTGGCAGGGGCCT +
Preference number: 3 (lower is better)
Translates to: RGPPWRRQSKGT*FSGTGVAWQGP
Trigger: AGGCCCCTGCCACGCCACACCAGTGCCCGAGAACCAAGTGCCTTTACTCTGCCTCCTCCAAGGCGGTCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR CCA 72 bp ATCGCCTGTCCAGTCGGCCCGGCTAGTGGTCCAGGCTaGGCCCAACCCCATCCAAAGGTTACTCTCAGGTGG +
Preference number: 3 (lower is better)
Translates to: IACPVGPASGPG*AQPHPKVTLRW
Trigger: CCACCTGAGAGTAACCTTTGGATGGGGTTGGGCCCAGCCTGGACCACTAGCCGGGCCGACTGGACAGGCGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR CAA 90 bp TGGTTCAGCACTTCCTCGTCCCTCTCTGGGTCCTCGGGGGAAGAGGACCGCCTTCTGCAGGATCAAGTCTaGGCTCCACACCCGGCCCTG +
Preference number: 3 (lower is better)
Translates to: WFSTSSSLSGSSGEEDRLLQDQV*APHPAL
Trigger: CAGGGCCGGGTGTGGAGCCAAGACTTGATCCTGCAG...AAGGCGGTCCTCTTCCCCCGAGGACCCAGAGAGGGACGAGGAAGTGCTGAACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR GCA 72 bp TCCGTCCCGCCTCATTCTTCACCAGCCACCACCGCTTaGTGTGGTCCAGAACCTCCAGCTTCTCTCCCTGGA +
Preference number: 3 (lower is better)
Translates to: SVPPHSSPATTA*CGPEPPASLPG
Trigger: TCCAGGGAGAGAAGCTGGAGGTTCTGGACCACAGCAAGCGGTGGTGGCTGGTGAAGAATGAGGCGGGACGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR TCA 72 bp AGCTTCTGCAAGGCATCCTCGGGCCCCTGGACTCTCTaGCTCCCCTGCTTGCATGTCATCAAGTGCTGCAGG +
Preference number: 3 (lower is better)
Translates to: SFCKASSGPWTL*LPCLHVIKCCR
Trigger: CCTGCAGCACTTGATGACATGCAAGCAGGGGAGTCAGAGAGTCCAGGGGCCCGAGGATGCCTTGCAGAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR TCA 72 bp TGCTTGGCTGGAGGGCTCTGGAAGTTGCCAGTCATCTaGGAATGTGGGTTGGTAGGGCAGGGGCTCATCGCC +
Preference number: 3 (lower is better)
Translates to: CLAGGLWKLPVI*ECGLVGQGLIA
Trigger: GGCGATGAGCCCCTGCCCTACCAACCCACATTCTCAGATGACTGGCAACTTCCAGAGCCCTCCAGCCAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR GCA 72 bp GAGTCCAGCTCCTCCTTGGTCTCAATGTCCAGCAGCTaGAGCCAGCCGTCCCTGACCTGCAGGATCAAGTCT +
Preference number: 3 (lower is better)
Translates to: ESSSSLVSMSSS*SQPSLTCRIKS
Trigger: AGACTTGATCCTGCAGGTCAGGGACGGCTGGCTGCAGCTGCTGGACATTGAGACCAAGGAGGAGCTGGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR CCA 72 bp ACAAGACTTGCATTTTCAGGGCTGGCTGGGCAGGTTTaGGGCTGGAGGGCCGAAGGGAAACAGGGTCCTGGT +
Preference number: 3 (lower is better)
Translates to: TRLAFSGLAGQV*GWRAEGKQGPG
Trigger: ACCAGGACCCTGTTTCCCTTCGGCCCTCCAGCCCCAAACCTGCCCAGCCAGCCCTGAAAATGCAAGTCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR CCA 72 bp TCCAACTCAAGACTTAGGGCTCTGGATAGTCCAGGCTaGGTAGTACCCGAGAGGGTGACTGGCCCTGGGTCC +
Preference number: 3 (lower is better)
Translates to: SNSRLRALDSPG*VVPERVTGPGS
Trigger: GGACCCAGGGCCAGTCACCCTCTCGGGTACTACCCAGCCTGGACTATCCAGAGCCCTAAGTCTTGAGTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR CAA 90 bp GAGCTGGGGTGTGGGGTTTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGAGCGGGGCCTGGTTCTaGGAGGTGTCTAAGCTGGTG +
Preference number: 3 (lower is better)
Translates to: ELGCGVCCKLGSRRGILGSGAWF*EVSKLV
Trigger: CACCAGCTTAGACACCTCCAAGAACCAGGCCCCGCT...CCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCCCACACCCCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
3UTR-3UTR CAA 90 bp TACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTGGGCTGGGGTGTGGGGTTaGCTGCAAACTGGGATCCAG +
Preference number: 3 (lower is better)
Translates to: YWGGSNTARRDTVCFSLWAGVWG*LQTGIQ
Trigger: CTGGATCCCAGTTTGCAGCAAACCCCACACCCCAGC...CCAGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
3UTR GCA 72 bp CTGCAGGATCAAGTCTTGGCTCCACACCCGGCCCTGTaGATCCATCTCGAACAGCTTCTGCAAGGCATCCTC +
Preference number: 3 (lower is better)
Translates to: LQDQVLAPHPAL*IHLEQLLQGIL
Trigger: GAGGATGCCTTGCAGAAGCTGTTCGAGATGGATGCACAGGGCCGGGTGTGGAGCCAAGACTTGATCCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR CAA 90 bp TACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTGGATCAGATCTGCCATCTaGCATCAGCGGGGCCTGGTT +
Preference number: 3 (lower is better)
Translates to: YWGGSNTARRDTVCFSLWIRSAI*HQRGLV
Trigger: AACCAGGCCCCGCTGATGCAAGATGGCAGATCTGAT...CCAGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
3UTR CCA 72 bp AGCTTCAAACTCGTACAAGACTTGCATTTTCAGGGCTaGCTGGGCAGGTTTGGGGCTGGAGGGCCGAAGGGA +
Preference number: 3 (lower is better)
Translates to: SFKLVQDLHFQG*LGRFGAGGPKG
Trigger: TCCCTTCGGCCCTCCAGCCCCAAACCTGCCCAGCCAGCCCTGAAAATGCAAGTCTTGTACGAGTTTGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR GCA 72 bp TGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTaGTTCAGCCTCTGGGCCTGTCCATTGTTTTTGCTG +
Preference number: 3 (lower is better)
Translates to: WGGSNTARRDTV*FSLWACPLFLL
Trigger: CAGCAAAAACAATGGACAGGCCCAGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
3UTR GCA 72 bp TCCCGTGGGTTCCTAGCTTCAAACTCGTACAAGACTTaGATTTTCAGGGCTGGCTGGGCAGGTTTGGGGCTG +
Preference number: 3 (lower is better)
Translates to: SRGFLASNSYKT*IFRAGWAGLGL
Trigger: CAGCCCCAAACCTGCCCAGCCAGCCCTGAAAATGCAAGTCTTGTACGAGTTTGAAGCTAGGAACCCACGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR GCA 72 bp AAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTaGCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGG +
Preference number: 3 (lower is better)
Translates to: KRNSRGSNGYQI*HLASAGPGSWR
Trigger: CCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
3UTR-3UTR CAA 90 bp CAGGATGTTGCTTGGAATGTAGCCGCTCCGTCCCGCCTCATTCTTCACCAGCCAAAACTCGTACAAGACTaGCATTTTCAGGGCTGGCTG +
Preference number: 3 (lower is better)
Translates to: QDVAWNVAAPSRLILHQPKLVQD*HFQGWL
Trigger: CAGCCAGCCCTGAAAATGCAAGTCTTGTACGAGTTT...TGGCTGGTGAAGAATGAGGCGGGACGGAGCGGCTACATTCCAAGCAACATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR CCA 72 bp CTCCAGCTTCTCTCCCTGGACCACAGTCAGTTCCCGTaGGTTCCTAGCTTCAAACTCGTACAAGACTTGCAT +
Preference number: 3 (lower is better)
Translates to: LQLLSLDHSQFP*VPSFKLVQDLH
Trigger: ATGCAAGTCTTGTACGAGTTTGAAGCTAGGAACCCACGGGAACTGACTGTGGTCCAGGGAGAGAAGCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR CAA 90 bp GCATGCAATAATACGGTCCGAATCAAACCAAGACTATCTCCTCTGCTTGCCACTGAGTCCAGCTCCTCCTaGGTCTCAATGTCCAGCAGC +
Preference number: 3 (lower is better)
Translates to: ACNNTVRIKPRLSPLLATESSSS*VSMSSS
Trigger: GCTGCTGGACATTGAGACCAAGGAGGAGCTGGACTC...AGTGGCAAGCAGAGGAGATAGTCTTGGTTTGATTCGGACCGTATTATTGCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR-3UTR CAA 90 bp TTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCATCAGATCTGCCATCTaGCATCAGCGGGGCCTGGTT +
Preference number: 3 (lower is better)
Translates to: LRRRGTEQILDKPRHKCSIRSAI*HQRGLV
Trigger: AACCAGGCCCCGCTGATGCAAGATGGCAGATCTGAT...GGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
3UTR-3UTR CAA 90 bp TTGAAGATGCTTTTATTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTGCTGGGGTGTGGGGTTaGCTGCAAACTGGGATCCAG +
Preference number: 3 (lower is better)
Translates to: LKMLLLRRRGTEQILDKPAGVWG*LQTGIQ
Trigger: CTGGATCCCAGTTTGCAGCAAACCCCACACCCCAGC...AGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAATAAAAGCATCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
3UTR-3UTR CAA 90 bp TTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCGCCTGTCCATTGTTTTaGCTGTGTGAGCTGGGGTGT +
Preference number: 3 (lower is better)
Translates to: LRRRGTEQILDKPRHKCSACPLF*LCELGC
Trigger: ACACCCCAGCTCACACAGCAAAAACAATGGACAGGC...GGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
3UTR-3UTR CAA 90 bp GCATGCAATAATACGGTCCGAATCAAACCAAGACTATCTCCTCTGCTTGCCACTCAGGACTGTAGCAGGTaGATAGCTTTAGGGGTGAGG +
Preference number: 3 (lower is better)
Translates to: ACNNTVRIKPRLSPLLATQDCSR*IALGVR
Trigger: CCTCACCCCTAAAGCTATCAACCTGCTACAGTCCTG...AGTGGCAAGCAGAGGAGATAGTCTTGGTTTGATTCGGACCGTATTATTGCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR TCA 90 bp AGGCCCCCTCCATCTGTCCTGGCCTGGCTGAAGGCCTCCAAGTCGAGGTCTGCTCTCCCTGGGTGCCAGTaGAGGCCGGGTGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: RPPPSVLAWLKASKSRSALPGCQ*RPGAWS
Trigger: GGACCAGGCACCCGGCCTTCACTGGCACCCAGGGAG...AGCAGACCTCGACTTGGAGGCCTTCAGCCAGGCCAGGACAGATGGAGGGGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR GCA 90 bp CTGGATAGTCCAGGCTGGGTAGTACCCGAGAGGGTGACTGGCCCTGGGTCCCAGGCGTGCTCCACCCTGTaGTGCAGGAGGGTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: LDSPGWVVPERVTGPGSQACSTL*CRRVGS
Trigger: AGAGCCCACCCTCCTGCAGCACAGGGTGGAGCACGC...CTGGGACCCAGGGCCAGTCACCCTCTCGGGTACTACCCAGCCTGGACTATCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp CTGGATAGTCCAGGCTGGGTAGTACCCGAGAGGGTGACTGGCCCTGGGTCCCAGCAGAGTGCTAGTGCCTaGCAGGCCCGGCTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: LDSPGWVVPERVTGPGSQQSASA*QARLLH
Trigger: GTGCAGGAGCCGGGCCTGCCAGGCACTAGCACTCTG...CTGGGACCCAGGGCCAGTCACCCTCTCGGGTACTACCCAGCCTGGACTATCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR TCA 90 bp TGTGGGTTGGTAGGGCAGGGGCTCATCGCCTGTCCAGTCGGCCCGGCTAGTGGTCCGGCTCCTGCACGGTaGTGGACAGGATGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: CGLVGQGLIACPVGPASGPAPAR*WTGWSC
Trigger: ACAACTCCATCCTGTCCATCACCGTGCAGGAGCCGG...ACCACTAGCCGGGCCGACTGGACAGGCGATGAGCCCCTGCCCTACCAACCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp TGCAGCCAGCCGTCCCTGACCTGCAGGATCAAGTCTTGGCTCCACACCCGGCCCTGGTCTTGGAGCAGGTaGTCCGGTGCTGGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: CSQPSLTCRIKSWLHTRPWSWSR*SGAGGG
Trigger: TCCACCACCAGCACCGGACCACCTGCTCCAAGACCA...GGGCCGGGTGTGGAGCCAAGACTTGATCCTGCAGGTCAGGGACGGCTGGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR TCA 90 bp TACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTGGCTCCCTGGGTGCCAGTaGAGGCCGGGTGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: YWGGSNTARRDTVCFSLWLPGCQ*RPGAWS
Trigger: GGACCAGGCACCCGGCCTTCACTGGCACCCAGGGAG...CCAGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp AGGCCCCCTCCATCTGTCCTGGCCTGGCTGAAGGCCTCCAAGTCGAGGTCTGCTGCAGCCAGCCGTCCCTaGCCTGCAGGATCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: RPPPSVLAWLKASKSRSAAASRP*PAGSSL
Trigger: AAGACTTGATCCTGCAGGTCAGGGACGGCTGGCTGC...AGCAGACCTCGACTTGGAGGCCTTCAGCCAGGCCAGGACAGATGGAGGGGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR TCA 90 bp GTGTACGAGCTCAGGGGCACTTGTCTCCTTCAGCCAGGTGGCCAGCCTTCCCAGCTGTCCTGGCCTGGCTaGAGGCCTCCAAGTCGAGGT +
Preference number: 4 (lower is better)
Translates to: VYELRGTCLLQPGGQPSQLSWPG*RPPSRG
Trigger: ACCTCGACTTGGAGGCCTTCAGCCAGGCCAGGACAG...CTGGGAAGGCTGGCCACCTGGCTGAAGGAGACAAGTGCCCCTGAGCTCGTACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR GCA 90 bp CTGGATAGTCCAGGCTGGGTAGTACCCGAGAGGGTGACTGGCCCTGGGTCCCAGTCAATGTCCAGCAGCTaGAGCCAGCCGTCCCTGACC +
Preference number: 4 (lower is better)
Translates to: LDSPGWVVPERVTGPGSQSMSSS*SQPSLT
Trigger: GGTCAGGGACGGCTGGCTGCAGCTGCTGGACATTGA...CTGGGACCCAGGGCCAGTCACCCTCTCGGGTACTACCCAGCCTGGACTATCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp TGTGGGTTGGTAGGGCAGGGGCTCATCGCCTGTCCAGTCGGCCCGGCTAGTGGTTGCAGGATCAAGTCTTaGCTCCACACCCGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: CGLVGQGLIACPVGPASGCRIKS*LHTRPC
Trigger: ACAGGGCCGGGTGTGGAGCCAAGACTTGATCCTGCA...ACCACTAGCCGGGCCGACTGGACAGGCGATGAGCCCCTGCCCTACCAACCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR TCA 90 bp GGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTCTCCCTGGGTGCCAGTaGAGGCCGGGTGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: GALMGIRSAILHQRGLVLLPGCQ*RPGAWS
Trigger: GGACCAGGCACCCGGCCTTCACTGGCACCCAGGGAG...AAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp TACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTGGTGGAACCCGAGAGGGTaGCTGGCCCTGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: YWGGSNTARRDTVCFSLWWNPRG*LALGPR
Trigger: CCTGGGACCCAGGGCCAGTCACCCTCTCGGGTTCCA...CCAGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TGTGGGTTGGTAGGGCAGGGGCTCATCGCCTGTCCAGTCGGCCCGGCTAGTGGTGCAGTCAATGTACTGTaGCTGGGTGAGACCTCCCTG +
Preference number: 4 (lower is better)
Translates to: CGLVGQGLIACPVGPASGAVNVL*LGETSL
Trigger: CAGGGAGGTCTCACCCAGGCACAGTACATTGACTGC...ACCACTAGCCGGGCCGACTGGACAGGCGATGAGCCCCTGCCCTACCAACCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp CGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTCTCGGGCACTGGTGTaGCGTGGCAGGGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: RGSNGYQICHLASAGPGSSRALV*RGRGLG
Trigger: CCCAAGGCCCCTGCCACGCCACACCAGTGCCCGAGA...AGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GAGCTGGGGTGTGGGGTTTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGTCTCGGGCACTGGTGTaGCGTGGCAGGGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: ELGCGVCCKLGSRRGILGSRALV*RGRGLG
Trigger: CCCAAGGCCCCTGCCACGCCACACCAGTGCCCGAGA...CCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCCCACACCCCAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GGACTCTCTGACTCCCCTGCTTGCATGTCATCAAGTGCTGCAGGGAGAGGGGGATTGGTTCTCGGGCACTaGTGTGGCGTGGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: GLSDSPACMSSSAAGRGGLVLGH*CGVAGA
Trigger: GGCCCCTGCCACGCCACACCAGTGCCCGAGAACCAA...TCCCCCTCTCCCTGCAGCACTTGATGACATGCAAGCAGGGGAGTCAGAGAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp CTGGATAGTCCAGGCTGGGTAGTACCCGAGAGGGTGACTGGCCCTGGGTCCCAGCACCACCGCTTGCTGTaGTCCAGAACCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LDSPGWVVPERVTGPGSQHHRLL*SRTSSF
Trigger: GAAGCTGGAGGTTCTGGACCACAGCAAGCGGTGGTG...CTGGGACCCAGGGCCAGTCACCCTCTCGGGTACTACCCAGCCTGGACTATCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp GAGCTGGGGTGTGGGGTTTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGCTGGCTGGGCAGGTTTaGGGCTGGAGGGCCGAAGGG +
Preference number: 4 (lower is better)
Translates to: ELGCGVCCKLGSRRGILGLAGQV*GWRAEG
Trigger: CCCTTCGGCCCTCCAGCCCCAAACCTGCCCAGCCAG...CCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCCCACACCCCAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361852.8
3UTR CAA 72 bp CTGCAGCCAGCCGTCCCTGACCTGCAGGATCAAGTCTaGGCTCCACACCCGGCCCTGTGCATCCATCTCGAA +
Preference number: 4 (lower is better)
Translates to: LQPAVPDLQDQV*APHPALCIHLE
Trigger: TTCGAGATGGATGCACAGGGCCGGGTGTGGAGCCAAGACTTGATCCTGCAGGTCAGGGACGGCTGGCTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
3UTR CAA 72 bp CTCCGTCCCGCCTCATTCTTCACCAGCCACCACCGCTaGCTGTGGTCCAGAACCTCCAGCTTCTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LRPASFFTSHHR*LWSRTSSFSPW
Trigger: CCAGGGAGAGAAGCTGGAGGTTCTGGACCACAGCAAGCGGTGGTGGCTGGTGAAGAATGAGGCGGGACGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR GCA 90 bp TGCTGTGGTCCAGAACCTCCAGCTTCTCTCCCTGGACCACAGTCAGTTCCCGTGGAGCAGGTGGTCCGGTaGTGGTGGTGGAAGGACAGC +
Preference number: 4 (lower is better)
Translates to: CCGPEPPASLPGPQSVPVEQVVR*WWWKDS
Trigger: GCTGTCCTTCCACCACCAGCACCGGACCACCTGCTC...CACGGGAACTGACTGTGGTCCAGGGAGAGAAGCTGGAGGTTCTGGACCACAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR GCA 90 bp TACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTGGGGCAGGCCCGGCTCCTaGACGGTGATGGACAGGATG +
Preference number: 4 (lower is better)
Translates to: YWGGSNTARRDTVCFSLWGRPGS*TVMDRM
Trigger: CATCCTGTCCATCACCGTGCAGGAGCCGGGCCTGCC...CCAGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GTGTACGAGCTCAGGGGCACTTGTCTCCTTCAGCCAGGTGGCCAGCCTTCCCAGGTCCGGTGCTGGTGGTaGAAGGACAGCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VYELRGTCLLQPGGQPSQVRCWW*KDSSFS
Trigger: AGAGAAGCTGCTGTCCTTCCACCACCAGCACCGGAC...CTGGGAAGGCTGGCCACCTGGCTGAAGGAGACAAGTGCCCCTGAGCTCGTACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp TGTCCTGGCCTGGCTGAAGGCCTCCAAGTCGAGGTCTGCTTTGCTCCAGCTCTTCCAGGAGGCTGGTCTTaGAGCAGGTGGTCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: CPGLAEGLQVEVCFAPALPGGWS*SRWSGA
Trigger: AGCACCGGACCACCTGCTCCAAGACCAGCCTCCTGG...AAGAGCTGGAGCAAAGCAGACCTCGACTTGGAGGCCTTCAGCCAGGCCAGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp GGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTCTGAGGACGGCTCCCTaGGTGCCAGTGAAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GALMGIRSAILHQRGLVLLRTAP*VPVKAG
Trigger: CCCGGCCTTCACTGGCACCCAGGGAGCCGTCCTCAG...AAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp CAGGGACTTGAAGAGGATGTGTACGAGCTCAGGGGCACTTGTCTCCTTCAGCCATCTCGGGCACTGGTGTaGCGTGGCAGGGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: QGLEEDVYELRGTCLLQPSRALV*RGRGLG
Trigger: CCCAAGGCCCCTGCCACGCCACACCAGTGCCCGAGA...TGGCTGAAGGAGACAAGTGCCCCTGAGCTCGTACACATCCTCTTCAAGTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp GAGCTGGGGTGTGGGGTTTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGGGCAGGTTTGGGGCTaGAGGGCCTGGAGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: ELGCGVCCKLGSRRGILGGQVWG*RAWSWG
Trigger: ACCCCAACTCCAGGCCCTCCAGCCCCAAACCTGCCC...CCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCCCACACCCCAGCTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTACCCGAGAGGGTGACTaGCCCTGGGTCCCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: VTGEAPTQPEGTLFASASTREGD*PWVPGV
Trigger: GACCCCTGGGACCCAGGGCCAGTCACCCTCTCGGGT...AGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GGACTCTCTGACTCCCCTGCTTGCATGTCATCAAGTGCTGCAGGGAGAGGGGGAGGGCCTTGGGGATGGTaGGAGGCCTGCAGTGTAAGG +
Preference number: 4 (lower is better)
Translates to: GLSDSPACMSSSAAGRGGGPWGW*EACSVR
Trigger: CCTTACACTGCAGGCCTCCCACCATCCCCAAGGCCC...TCCCCCTCTCCCTGCAGCACTTGATGACATGCAAGCAGGGGAGTCAGAGAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp TGCTGTGGTCCAGAACCTCCAGCTTCTCTCCCTGGACCACAGTCAGTTCCCGTGCAGGGGCCTTGGGGATaGTGGGAGGCCTGCAGTGTA +
Preference number: 4 (lower is better)
Translates to: CCGPEPPASLPGPQSVPVQGPWG*WEACSV
Trigger: TACACTGCAGGCCTCCCACCATCCCCAAGGCCCCTG...CACGGGAACTGACTGTGGTCCAGGGAGAGAAGCTGGAGGTTCTGGACCACAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR TCA 90 bp GACTCTCTGACTCCCCTGCTTGCATGTCATCAAGTGCTGCAGGGAGAGGGGGAGGGGTGGGCTCTGAGGTaGGGTTCTGGGAGTACTCCT +
Preference number: 4 (lower is better)
Translates to: DSLTPLLACHQVLQGEGEGWALR*GSGSTP
Trigger: AGGAGTACTCCCAGAACCTCACCTCAGAGCCCACCC...CTCCCCCTCTCCCTGCAGCACTTGATGACATGCAAGCAGGGGAGTCAGAGAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR TCA 90 bp GTTGCCAGTCATCTGAGAATGTGGGTTGGTAGGGCAGGGGCTCATCGCCTGTCCCAGGAGGGTGGGCTCTaGGGTGAGGTTCTGGGAGTA +
Preference number: 4 (lower is better)
Translates to: VASHLRMWVGRAGAHRLSQEGGL*GEVLGV
Trigger: TACTCCCAGAACCTCACCTCAGAGCCCACCCTCCTG...GGACAGGCGATGAGCCCCTGCCCTACCAACCCACATTCTCAGATGACTGGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR TCA 90 bp GATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTGTCTAAGCTGGTGGGCCCCTGGACTCTCTaGCTCCCCTGCTTGCATGTC +
Preference number: 4 (lower is better)
Translates to: DLPSCISGAWFLEVSKLVGPWTL*LPCLHV
Trigger: GACATGCAAGCAGGGGAGTCAGAGAGTCCAGGGGCC...CACCAGCTTAGACACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp TACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTGGCTGTCCTGGCCTGGCTaGAGGCCTCCAAGTCGAGGT +
Preference number: 4 (lower is better)
Translates to: YWGGSNTARRDTVCFSLWLSWPG*RPPSRG
Trigger: ACCTCGACTTGGAGGCCTTCAGCCAGGCCAGGACAG...CCAGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp CGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTCCTGCAGCCAGTCTGTaGCCTCTTCAGGCCTCGAGC +
Preference number: 4 (lower is better)
Translates to: RGSNGYQICHLASAGPGSPAASL*PLQASS
Trigger: GCTCGAGGCCTGAAGAGGTCACAGACTGGCTGCAGG...AGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTGGGAGCAGGTGGTCCGGTaGTGGTGGTGGAAGGACAGC +
Preference number: 4 (lower is better)
Translates to: YWGGSNTARRDTVCFSLWEQVVR*WWWKDS
Trigger: GCTGTCCTTCCACCACCAGCACCGGACCACCTGCTC...CCAGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp AAGGGTGCTTGGCTGGAGGGCTCTGGAAGTTGCCAGTCATCTGAGAATGTGGGTGGCAGGCCCGGCTCCTaGACGGTGATGGACAGGATG +
Preference number: 4 (lower is better)
Translates to: KGAWLEGSGSCQSSENVGGRPGS*TVMDRM
Trigger: CATCCTGTCCATCACCGTGCAGGAGCCGGGCCTGCC...ACCCACATTCTCAGATGACTGGCAACTTCCAGAGCCCTCCAGCCAAGCACCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR GCA 90 bp CAGGATGTTGCTTGGAATGTAGCCGCTCCGTCCCGCCTCATTCTTCACCAGCCACGGCTCCAGATAGCGTaGCTGCTCCATAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: QDVAWNVAAPSRLILHQPRLQIA*LLHRER
Trigger: CCGCTCCCTATGGAGCAGGCACGCTATCTGGAGCCG...TGGCTGGTGAAGAATGAGGCGGGACGGAGCGGCTACATTCCAAGCAACATCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp CGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTCAGGTGGTCCGGTGCTaGTGGTGGAAGGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: RGSNGYQICHLASAGPGSQVVRC*WWKDSS
Trigger: GCTGCTGTCCTTCCACCACCAGCACCGGACCACCTG...AGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TTGAAGAGGATGTGTACGAGCTCAGGGGCACTTGTCTCCTTCAGCCAGGTGGCCCAGGTGGTCCGGTGCTaGTGGTGGAAGGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: LKRMCTSSGALVSFSQVAQVVRC*WWKDSS
Trigger: GCTGCTGTCCTTCCACCACCAGCACCGGACCACCTG...GGCCACCTGGCTGAAGGAGACAAGTGCCCCTGAGCTCGTACACATCCTCTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp TACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTGGCCAGGAGGCTGGTCTTaGAGCAGGTGGTCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: YWGGSNTARRDTVCFSLWPGGWS*SRWSGA
Trigger: AGCACCGGACCACCTGCTCCAAGACCAGCCTCCTGG...CCAGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTCAGAGTGCTAGTGCCTaGCAGGCCCGGCTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: GALMGIRSAILHQRGLVLQSASA*QARLLH
Trigger: GTGCAGGAGCCGGGCCTGCCAGGCACTAGCACTCTG...AAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TGTCCTGGCCTGGCTGAAGGCCTCCAAGTCGAGGTCTGCTTTGCTCCAGCTCTTTGCTCTAGGGTCCTCTaGTGGGGCTGTTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: CPGLAEGLQVEVCFAPALCSRVL*WGCSGG
Trigger: CCCTCCAGAACAGCCCCACCAGAGGACCCTAGAGCA...AAGAGCTGGAGCAAAGCAGACCTCGACTTGGAGGCCTTCAGCCAGGCCAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp CTGGATAGTCCAGGCTGGGTAGTACCCGAGAGGGTGACTGGCCCTGGGTCCCAGCAGAGTAAAGGCACTTaGTTCTCGGGCACTGGTGTG +
Preference number: 4 (lower is better)
Translates to: LDSPGWVVPERVTGPGSQQSKGT*FSGTGV
Trigger: CACACCAGTGCCCGAGAACCAAGTGCCTTTACTCTG...CTGGGACCCAGGGCCAGTCACCCTCTCGGGTACTACCCAGCCTGGACTATCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR TCA 90 bp CAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCTCCCTGGGTGCCAGTaGAGGCCGGGTGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: QTGIQKRNSRGSNGYQICLPGCQ*RPGAWS
Trigger: GGACCAGGCACCCGGCCTTCACTGGCACCCAGGGAG...GCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp GGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGCCCCTGGACTCTCTaGCTCCCCTGCTTGCATGTC +
Preference number: 4 (lower is better)
Translates to: GALMGIRSAILHQRGLVLGPWTL*LPCLHV
Trigger: GACATGCAAGCAGGGGAGTCAGAGAGTCCAGGGGCC...AAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp GCTCTGGAAGTTGCCAGTCATCTGAGAATGTGGGTTGGTAGGGCAGGGGCTCATGGCCCCTGGACTCTCTaGCTCCCCTGCTTGCATGTC +
Preference number: 4 (lower is better)
Translates to: ALEVASHLRMWVGRAGAHGPWTL*LPCLHV
Trigger: GACATGCAAGCAGGGGAGTCAGAGAGTCCAGGGGCC...ATGAGCCCCTGCCCTACCAACCCACATTCTCAGATGACTGGCAACTTCCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR TCA 90 bp CGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTGCAGCCAGCCGTCCCTaGCCTGCAGGATCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: RGSNGYQICHLASAGPGSAASRP*PAGSSL
Trigger: AAGACTTGATCCTGCAGGTCAGGGACGGCTGGCTGC...AGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp CGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTCCGGCTCCTGCACGGTaGTGGACAGGATGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: RGSNGYQICHLASAGPGSPAPAR*WTGWSC
Trigger: ACAACTCCATCCTGTCCATCACCGTGCAGGAGCCGG...AGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp TGTGGGGTTTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGTGGAACCCGAGAGGGTaGCTGGCCCTGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: CGVCCKLGSRRGILGALMWNPRG*LALGPR
Trigger: CCTGGGACCCAGGGCCAGTCACCCTCTCGGGTTCCA...CATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp AGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGTGGAACCCGAGAGGGTaGCTGGCCCTGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: RGILGALMGIRSAILHQRWNPRG*LALGPR
Trigger: CCTGGGACCCAGGGCCAGTCACCCTCTCGGGTTCCA...CCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp AGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTGCAGCCAGTCTGTaGCCTCTTCAGGCCTCGAGC +
Preference number: 4 (lower is better)
Translates to: RWLLGRLQHSQKGHCLLQPAASL*PLQASS
Trigger: GCTCGAGGCCTGAAGAGGTCACAGACTGGCTGCAGG...CTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp GGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGAGCAGGTGGTCCGGTaGTGGTGGTGGAAGGACAGC +
Preference number: 4 (lower is better)
Translates to: GALMGIRSAILHQRGLVLEQVVR*WWWKDS
Trigger: GCTGTCCTTCCACCACCAGCACCGGACCACCTGCTC...AAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp GAGCTGGGGTGTGGGGTTTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGTCAATGTCCAGCAGCTaGAGCCAGCCGTCCCTGACC +
Preference number: 4 (lower is better)
Translates to: ELGCGVCCKLGSRRGILGSMSSS*SQPSLT
Trigger: GGTCAGGGACGGCTGGCTGCAGCTGCTGGACATTGA...CCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCCCACACCCCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp GATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTGTCTAAGCTGGTGGATGGTGGGAGGCTGTaGTCTAGGGTCCTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: DLPSCISGAWFLEVSKLVDGGRL*SRVLWW
Trigger: CCACCAGAGGACCCTAGAGCACAGCCTCCCACCATC...CACCAGCTTAGACACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp GATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTGTCTAAGCTGGTGCCAGCCACCACCGCTTaGTGTGGTCCAGAACCTCCA +
Preference number: 4 (lower is better)
Translates to: DLPSCISGAWFLEVSKLVPATTA*CGPEPP
Trigger: TGGAGGTTCTGGACCACAGCAAGCGGTGGTGGCTGG...CACCAGCTTAGACACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp AAGTCTTGGCTCCACACCCGGCCCTGTGCATCCATCTCGAACAGCTTCTGCAAGCCAGCCACCACCGCTTaGTGTGGTCCAGAACCTCCA +
Preference number: 4 (lower is better)
Translates to: KSWLHTRPCASISNSFCKPATTA*CGPEPP
Trigger: TGGAGGTTCTGGACCACAGCAAGCGGTGGTGGCTGG...CTTGCAGAAGCTGTTCGAGATGGATGCACAGGGCCGGGTGTGGAGCCAAGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR GCA 90 bp GGACTCTCTGACTCCCCTGCTTGCATGTCATCAAGTGCTGCAGGGAGAGGGGGAGGGGCTCCAGGATGTTaGTTGGAATGTAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: GLSDSPACMSSSAAGRGGGAPGC*LECSRS
Trigger: GGAGCGGCTACATTCCAAGCAACATCCTGGAGCCCC...TCCCCCTCTCCCTGCAGCACTTGATGACATGCAAGCAGGGGAGTCAGAGAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR GCA 90 bp GATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTGTCTAAGCTGGTGGCTCCCCAGGTCTTATaGGAAGTAGCTGGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: DLPSCISGAWFLEVSKLVAPQVL*EVAGSP
Trigger: CGGGGAGCCAGCTACTTCGCATAAGACCTGGGGAGC...CACCAGCTTAGACACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TTGAAGAGGATGTGTACGAGCTCAGGGGCACTTGTCTCCTTCAGCCAGGTGGCCGGATGGTGGGAGGCCTaGAGTGTAAGGGGACCATGG +
Preference number: 4 (lower is better)
Translates to: LKRMCTSSGALVSFSQVAGWWEA*SVRGPW
Trigger: CCATGGTCCCCTTACACTGCAGGCCTCCCACCATCC...GGCCACCTGGCTGAAGGAGACAAGTGCCCCTGAGCTCGTACACATCCTCTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp CGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTGTGGTCCGGTGCTGGTaGTGGAAGGACAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RGSNGYQICHLASAGPGSVVRCW*WKDSSF
Trigger: GAAGCTGCTGTCCTTCCACCACCAGCACCGGACCAC...AGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTGGTGGTCTTGGAGCAGGTaGTCCGGTGCTGGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: YWGGSNTARRDTVCFSLWWSWSR*SGAGGG
Trigger: TCCACCACCAGCACCGGACCACCTGCTCCAAGACCA...CCAGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTGTCTAAGCTGGTGTGGTCTTGGAGCAGGTaGTCCGGTGCTGGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: DLPSCISGAWFLEVSKLVWSWSR*SGAGGG
Trigger: TCCACCACCAGCACCGGACCACCTGCTCCAAGACCA...CACCAGCTTAGACACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp AGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCAGGAGGCTGGTCTTaGAGCAGGTGGTCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: RWLLGRLQHSQKGHCLLQPGGWS*SRWSGA
Trigger: AGCACCGGACCACCTGCTCCAAGACCAGCCTCCTGG...CTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TGTTGCTTGGAATGTAGCCGCTCCGTCCCGCCTCATTCTTCACCAGCCACCACCTCTGCCCCCACTTCCTaGCACTGGAAGAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: CCLECSRSVPPHSSPATTSAPTS*HWKSRV
Trigger: CACTCTGCTCTTCCAGTGCCAGGAAGTGGGGGCAGA...GGTGGTGGCTGGTGAAGAATGAGGCGGGACGGAGCGGCTACATTCCAAGCAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp CTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTTTGGTTCTCGGGCACTaGTGTGGCGTGGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: LMGIRSAILHQRGLVLGGLVLGH*CGVAGA
Trigger: GGCCCCTGCCACGCCACACCAGTGCCCGAGAACCAA...ACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp CTTGGCTCCACACCCGGCCCTGTGCATCCATCTCGAACAGCTTCTGCAAGGCATGGAAGAGGACCGCCTTaGAGGAGGCAGAGTAAAGGC +
Preference number: 4 (lower is better)
Translates to: LGSTPGPVHPSRTASARHGRGPP*RRQSKG
Trigger: GCCTTTACTCTGCCTCCTCCAAGGCGGTCCTCTTCC...ATGCCTTGCAGAAGCTGTTCGAGATGGATGCACAGGGCCGGGTGTGGAGCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp GATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTGTCTAAGCTGGTGTTCCTCGTCCCTCTCTaGGTCCTCGGGGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: DLPSCISGAWFLEVSKLVFLVPL*VLGGRG
Trigger: TCCTCTTCCCCCGAGGACCCAGAGAGGGACGAGGAA...CACCAGCTTAGACACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp ATAGCTTTAGGGGTGAGGAGGGGTGAGATCACTTGGGCTGCTAGGCCAGCCTCATTCCTCGTCCCTCTCTaGGTCCTCGGGGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: IALGVRRGEITWAARPASFLVPL*VLGGRG
Trigger: TCCTCTTCCCCCGAGGACCCAGAGAGGGACGAGGAA...TGAGGCTGGCCTAGCAGCCCAAGTGATCTCACCCCTCCTCACCCCTAAAGCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp GTTGCCAGTCATCTGAGAATGTGGGTTGGTAGGGCAGGGGCTCATCGCCTGTCCCTGCTGGTCTTTGCCTaGGCCTTCTCCAGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: VASHLRMWVGRAGAHRLSLLVFA*AFSSFP
Trigger: GGGAAAGCTGGAGAAGGCCCAGGCAAAGACCAGCAG...GGACAGGCGATGAGCCCCTGCCCTACCAACCCACATTCTCAGATGACTGGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp TGTCCTGGCCTGGCTGAAGGCCTCCAAGTCGAGGTCTGCTTTGCTCCAGCTCTTAGGGGTGAGATCACTTaGGCTGCTAGGCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: CPGLAEGLQVEVCFAPALRGEIT*AARPAS
Trigger: TGAGGCTGGCCTAGCAGCCCAAGTGATCTCACCCCT...AAGAGCTGGAGCAAAGCAGACCTCGACTTGGAGGCCTTCAGCCAGGCCAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp GATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTGTCTAAGCTGGTGGCTAGTGGTCCAGGCTaGGCCCAACCCCATCCAAAG +
Preference number: 4 (lower is better)
Translates to: DLPSCISGAWFLEVSKLVASGPG*AQPHPK
Trigger: CTTTGGATGGGGTTGGGCCCAGCCTGGACCACTAGC...CACCAGCTTAGACACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TGTCCTGGCCTGGCTGAAGGCCTCCAAGTCGAGGTCTGCTTTGCTCCAGCTCTTCTAAGGGTGCTTGGCTaGAGGGCTCTGGAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: CPGLAEGLQVEVCFAPALLRVLG*RALEVA
Trigger: GGCAACTTCCAGAGCCCTCCAGCCAAGCACCCTTAG...AAGAGCTGGAGCAAAGCAGACCTCGACTTGGAGGCCTTCAGCCAGGCCAGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp TGGTTCAGCACTTCCTCGTCCCTCTCTGGGTCCTCGGGGGAAGAGGACCGCCTTAGGGAAACAGGGTCCTaGTATCCTAAGGGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: WFSTSSSLSGSSGEEDRLRETGS*YPKGAW
Trigger: CCAAGCACCCTTAGGATACCAGGACCCTGTTTCCCT...AAGGCGGTCCTCTTCCCCCGAGGACCCAGAGAGGGACGAGGAAGTGCTGAACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp AGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGACCCGAGAGGGTGACTaGCCCTGGGTCCCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: RGILGALMGIRSAILHQRTREGD*PWVPGV
Trigger: GACCCCTGGGACCCAGGGCCAGTCACCCTCTCGGGT...CCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GAGCTGGGGTGTGGGGTTTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCGGGGCCTGGTTCTTaGAGGTGTCTAAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: ELGCGVCCKLGSRRGILGAGPGS*RCLSWC
Trigger: GCACCAGCTTAGACACCTCCAAGAACCAGGCCCCGC...CCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCCCACACCCCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp AAGGGTGCTTGGCTGGAGGGCTCTGGAAGTTGCCAGTCATCTGAGAATGTGGGTGGGCAGGTTTGGGGCTaGAGGGCCGAAGGGAAACAG +
Preference number: 4 (lower is better)
Translates to: KGAWLEGSGSCQSSENVGGQVWG*RAEGKQ
Trigger: CTGTTTCCCTTCGGCCCTCCAGCCCCAAACCTGCCC...ACCCACATTCTCAGATGACTGGCAACTTCCAGAGCCCTCCAGCCAAGCACCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR TCA 90 bp GGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGGTGGGCTCTGAGGTaGGGTTCTGGGAGTACTCCT +
Preference number: 4 (lower is better)
Translates to: GALMGIRSAILHQRGLVLGWALR*GSGSTP
Trigger: AGGAGTACTCCCAGAACCTCACCTCAGAGCCCACCC...AAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp GGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTCAGGAGGGTGGGCTCTaGGGTGAGGTTCTGGGAGTA +
Preference number: 4 (lower is better)
Translates to: GALMGIRSAILHQRGLVLQEGGL*GEVLGV
Trigger: TACTCCCAGAACCTCACCTCAGAGCCCACCCTCCTG...AAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp GTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTCCGGCTCCTGCACGGTaGTGGACAGGATGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: VTGEAPTQPEGTLFASASPAPAR*WTGWSC
Trigger: ACAACTCCATCCTGTCCATCACCGTGCAGGAGCCGG...AGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp GATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTGTCTAAGCTGGTGCAGCCGTCCCTGACCTaGAGGATCAAGTCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: DLPSCISGAWFLEVSKLVQPSLT*RIKSWL
Trigger: GAGCCAAGACTTGATCCTGCAGGTCAGGGACGGCTG...CACCAGCTTAGACACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp AAGTCTTGGCTCCACACCCGGCCCTGTGCATCCATCTCGAACAGCTTCTGCAAGCAGCCGTCCCTGACCTaGAGGATCAAGTCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: KSWLHTRPCASISNSFCKQPSLT*RIKSWL
Trigger: GAGCCAAGACTTGATCCTGCAGGTCAGGGACGGCTG...CTTGCAGAAGCTGTTCGAGATGGATGCACAGGGCCGGGTGTGGAGCCAAGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR GCA 90 bp CCTAAGGGTGCTTGGCTGGAGGGCTCTGGAAGTTGCCAGTCATCTGAGAATGTGGGTCTTCAGTCGCTCTaGCCCCACTTCCTGGCACTG +
Preference number: 4 (lower is better)
Translates to: PKGAWLEGSGSCQSSENVGLQSL*PHFLAL
Trigger: CAGTGCCAGGAAGTGGGGGCAGAGCGACTGAAGACC...CACATTCTCAGATGACTGGCAACTTCCAGAGCCCTCCAGCCAAGCACCCTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR GCA 90 bp GATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTGTCTAAGCTGGTGTCCTCCAGAGCCTTCTaGAGGCTGGTCTTCAGTCGC +
Preference number: 4 (lower is better)
Translates to: DLPSCISGAWFLEVSKLVSSRAF*RLVFSR
Trigger: GCGACTGAAGACCAGCCTGCAGAAGGCTCTGGAGGA...CACCAGCTTAGACACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp AGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGGCTCCCCAGGTCTTATaGGAAGTAGCTGGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: RWLLGRLQHSQKGHCLLQAPQVL*EVAGSP
Trigger: CGGGGAGCCAGCTACTTCGCATAAGACCTGGGGAGC...CTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GAGCTGGGGTGTGGGGTTTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGTCCGGTGCTGGTGGTaGAAGGACAGCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: ELGCGVCCKLGSRRGILGVRCWW*KDSSFS
Trigger: AGAGAAGCTGCTGTCCTTCCACCACCAGCACCGGAC...CCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCCCACACCCCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp AGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGTGGTCTTGGAGCAGGTaGTCCGGTGCTGGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: RWLLGRLQHSQKGHCLLQWSWSR*SGAGGG
Trigger: TCCACCACCAGCACCGGACCACCTGCTCCAAGACCA...CTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTGGTGCAGGATCAAGTCTTaGCTCCACACCCGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: YWGGSNTARRDTVCFSLWCRIKS*LHTRPC
Trigger: ACAGGGCCGGGTGTGGAGCCAAGACTTGATCCTGCA...CCAGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TGTTGCTTGGAATGTAGCCGCTCCGTCCCGCCTCATTCTTCACCAGCCACCACCCCCACTTCCTGGCACTaGAAGAGCAGAGTGCTAGTG +
Preference number: 4 (lower is better)
Translates to: CCLECSRSVPPHSSPATTPTSWH*KSRVLV
Trigger: CACTAGCACTCTGCTCTTCCAGTGCCAGGAAGTGGG...GGTGGTGGCTGGTGAAGAATGAGGCGGGACGGAGCGGCTACATTCCAAGCAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp GAGCTGGGGTGTGGGGTTTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGTCTAGGGTCCTCTGGTaGGGCTGTTCTGGAGGGATC +
Preference number: 4 (lower is better)
Translates to: ELGCGVCCKLGSRRGILGSRVLW*GCSGGI
Trigger: GATCCCTCCAGAACAGCCCCACCAGAGGACCCTAGA...CCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCCCACACCCCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTTGCTCTAGGGTCCTCTaGTGGGGCTGTTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: VTGEAPTQPEGTLFASASCSRVL*WGCSGG
Trigger: CCCTCCAGAACAGCCCCACCAGAGGACCCTAGAGCA...AGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTGTCTAAGCTGGTGGGAAGAGGACCGCCTTaGAGGAGGCAGAGTAAAGGC +
Preference number: 4 (lower is better)
Translates to: DLPSCISGAWFLEVSKLVGRGPP*RRQSKG
Trigger: GCCTTTACTCTGCCTCCTCCAAGGCGGTCCTCTTCC...CACCAGCTTAGACACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTTTCCTCGTCCCTCTCTaGGTCCTCGGGGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: GALMGIRSAILHQRGLVLFLVPL*VLGGRG
Trigger: TCCTCTTCCCCCGAGGACCCAGAGAGGGACGAGGAA...AAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GCTCTGGAAGTTGCCAGTCATCTGAGAATGTGGGTTGGTAGGGCAGGGGCTCATTCTCCTTCAGCCAGGTaGCCAGCCTTCCCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: ALEVASHLRMWVGRAGAHSPSAR*PAFPGG
Trigger: ACCTCCTGGGAAGGCTGGCCACCTGGCTGAAGGAGA...ATGAGCCCCTGCCCTACCAACCCACATTCTCAGATGACTGGCAACTTCCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp TGTTGCTTGGAATGTAGCCGCTCCGTCCCGCCTCATTCTTCACCAGCCACCACCTTGCATTTTCAGGGCTaGCTGGGCAGGTTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: CCLECSRSVPPHSSPATTLHFQG*LGRFGA
Trigger: AGCCCCAAACCTGCCCAGCCAGCCCTGAAAATGCAA...GGTGGTGGCTGGTGAAGAATGAGGCGGGACGGAGCGGCTACATTCCAAGCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp TGTCCTGGCCTGGCTGAAGGCCTCCAAGTCGAGGTCTGCTTTGCTCCAGCTCTTCTCCAGGATGTTGCTTaGAATGTAGCCGCTCCGTCC +
Preference number: 4 (lower is better)
Translates to: CPGLAEGLQVEVCFAPALLQDVA*NVAAPS
Trigger: GGACGGAGCGGCTACATTCCAAGCAACATCCTGGAG...AAGAGCTGGAGCAAAGCAGACCTCGACTTGGAGGCCTTCAGCCAGGCCAGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp GGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGCGGGGCCTGGTTCTTaGAGGTGTCTAAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: GALMGIRSAILHQRGLVLAGPGS*RCLSWC
Trigger: GCACCAGCTTAGACACCTCCAAGAACCAGGCCCCGC...AAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp CGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTCTCTTTGGACTCTGGTaGGTGGGGAGGCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: RGSNGYQICHLASAGPGSLFGLW*VGRLPG
Trigger: ACCAGGAAGCCTCCCCACCCACCAGAGTCCAAAGAG...AGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369805.7
CDS-3UTR CCA 90 bp GATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTGTCTAAGCTGGTGGTGCTCTTTGGACTCTaGTGGGTGGGGAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: DLPSCISGAWFLEVSKLVVLFGL*WVGRLP
Trigger: AGGAAGCCTCCCCACCCACCAGAGTCCAAAGAGCAC...CACCAGCTTAGACACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369805.7
CDS-3UTR TCA 90 bp AGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCCCTGGACTCTCTaGCTCCCCTGCTTGCATGTC +
Preference number: 4 (lower is better)
Translates to: RGILGALMGIRSAILHQRGPWTL*LPCLHV
Trigger: GACATGCAAGCAGGGGAGTCAGAGAGTCCAGGGGCC...CCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp GTGTACGAGCTCAGGGGCACTTGTCTCCTTCAGCCAGGTGGCCAGCCTTCCCAGTCTCCAGCTTTCCCATaGACAGCTCAATGTCCCTTA +
Preference number: 4 (lower is better)
Translates to: VYELRGTCLLQPGGQPSQSPAFP*TAQCPL
Trigger: TAAGGGACATTGAGCTGTTCATGGGAAAGCTGGAGA...CTGGGAAGGCTGGCCACCTGGCTGAAGGAGACAAGTGCCCCTGAGCTCGTACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR GCA 90 bp AGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGTCCTCCAGAGCCTTCTaGAGGCTGGTCTTCAGTCGC +
Preference number: 4 (lower is better)
Translates to: RWLLGRLQHSQKGHCLLQSSRAF*RLVFSR
Trigger: GCGACTGAAGACCAGCCTGCAGAAGGCTCTGGAGGA...CTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp AAGGGTGCTTGGCTGGAGGGCTCTGGAAGTTGCCAGTCATCTGAGAATGTGGGTTCCTCCAGAGCCTTCTaGAGGCTGGTCTTCAGTCGC +
Preference number: 4 (lower is better)
Translates to: KGAWLEGSGSCQSSENVGSSRAF*RLVFSR
Trigger: GCGACTGAAGACCAGCCTGCAGAAGGCTCTGGAGGA...ACCCACATTCTCAGATGACTGGCAACTTCCAGAGCCCTCCAGCCAAGCACCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR GCA 90 bp GATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTGTCTAAGCTGGTGGCAGTCAATGTACTGTaGCTGGGTGAGACCTCCCTG +
Preference number: 4 (lower is better)
Translates to: DLPSCISGAWFLEVSKLVAVNVL*LGETSL
Trigger: CAGGGAGGTCTCACCCAGGCACAGTACATTGACTGC...CACCAGCTTAGACACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp CGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTGCAGTCAATGTACTGTaGCTGGGTGAGACCTCCCTG +
Preference number: 4 (lower is better)
Translates to: RGSNGYQICHLASAGPGSAVNVL*LGETSL
Trigger: CAGGGAGGTCTCACCCAGGCACAGTACATTGACTGC...AGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp GGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGGGCTCCAGGATGTTaGTTGGAATGTAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: GALMGIRSAILHQRGLVLGAPGC*LECSRS
Trigger: GGAGCGGCTACATTCCAAGCAACATCCTGGAGCCCC...AAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp AGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGGTCCGGTGCTGGTGGTaGAAGGACAGCAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RWLLGRLQHSQKGHCLLQVRCWW*KDSSFS
Trigger: AGAGAAGCTGCTGTCCTTCCACCACCAGCACCGGAC...CTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTGTCTAAGCTGGTGTCCGGTGCAAGTAAATaGCTCTGCTGCTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: DLPSCISGAWFLEVSKLVSGASK*LCCWAL
Trigger: CAAGGCCCAGCAGCAGAGCCATTTACTTGCACCGGA...CACCAGCTTAGACACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTTGCAGGATCAAGTCTTaGCTCCACACCCGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: VTGEAPTQPEGTLFASASCRIKS*LHTRPC
Trigger: ACAGGGCCGGGTGTGGAGCCAAGACTTGATCCTGCA...AGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTTCTGCCCCCACTTCCTaGCACTGGAAGAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: GALMGIRSAILHQRGLVLSAPTS*HWKSRV
Trigger: CACTCTGCTCTTCCAGTGCCAGGAAGTGGGGGCAGA...AAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp CATTCATGGCCTGGATGCTGTCTAGGCGGTAAGAGTCCAGCTCCTCCTTGGTCTTCTAGGGTCCTCTGGTaGGGCTGTTCTGGAGGGATC +
Preference number: 4 (lower is better)
Translates to: HSWPGCCLGGKSPAPPWSSRVLW*GCSGGI
Trigger: GATCCCTCCAGAACAGCCCCACCAGAGGACCCTAGA...AGACCAAGGAGGAGCTGGACTCTTACCGCCTAGACAGCATCCAGGCCATGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp CTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTTGCTCTAGGGTCCTCTaGTGGGGCTGTTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: LMGIRSAILHQRGLVLGGCSRVL*WGCSGG
Trigger: CCCTCCAGAACAGCCCCACCAGAGGACCCTAGAGCA...ACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAAGAGGACCGCCTTaGAGGAGGCAGAGTAAAGGC +
Preference number: 4 (lower is better)
Translates to: GALMGIRSAILHQRGLVLGRGPP*RRQSKG
Trigger: GCCTTTACTCTGCCTCCTCCAAGGCGGTCCTCTTCC...AAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp AATTCTCGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTTTCCTCGTCCCTCTCTaGGTCCTCGGGGGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: NSRGSNGYQICHLASAGPFLVPL*VLGGRG
Trigger: TCCTCTTCCCCCGAGGACCCAGAGAGGGACGAGGAA...AGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCGAGAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp CTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTTCTCCTTCAGCCAGGTaGCCAGCCTTCCCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: LMGIRSAILHQRGLVLGGSPSAR*PAFPGG
Trigger: ACCTCCTGGGAAGGCTGGCCACCTGGCTGAAGGAGA...ACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTAGGGGTGAGATCACTTaGGCTGCTAGGCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: GALMGIRSAILHQRGLVLRGEIT*AARPAS
Trigger: TGAGGCTGGCCTAGCAGCCCAAGTGATCTCACCCCT...AAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp CTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTGCTAGTGGTCCAGGCTaGGCCCAACCCCATCCAAAG +
Preference number: 4 (lower is better)
Translates to: LMGIRSAILHQRGLVLGGASGPG*AQPHPK
Trigger: CTTTGGATGGGGTTGGGCCCAGCCTGGACCACTAGC...ACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GAGCTGGGGTGTGGGGTTTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGTTGCATTTTCAGGGCTaGCTGGGCAGGTTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: ELGCGVCCKLGSRRGILGLHFQG*LGRFGA
Trigger: AGCCCCAAACCTGCCCAGCCAGCCCTGAAAATGCAA...CCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCCCACACCCCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTGGCTCCAGGATGTTGCTTaGAATGTAGCCGCTCCGTCC +
Preference number: 4 (lower is better)
Translates to: YWGGSNTARRDTVCFSLWLQDVA*NVAAPS
Trigger: GGACGGAGCGGCTACATTCCAAGCAACATCCTGGAG...CCAGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTCTTATGCGAAGTAGCTaGCTCCCCGTCAGGGACCCA +
Preference number: 4 (lower is better)
Translates to: VTGEAPTQPEGTLFASASLMRSS*LPVRDP
Trigger: TGGGTCCCTGACGGGGAGCCAGCTACTTCGCATAAG...AGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GAGCTGGGGTGTGGGGTTTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGTGCATCAGCGGGGCCTaGTTCTTGGAGGTGTCTAAG +
Preference number: 4 (lower is better)
Translates to: ELGCGVCCKLGSRRGILGCISGA*FLEVSK
Trigger: CTTAGACACCTCCAAGAACCAGGCCCCGCTGATGCA...CCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCCCACACCCCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp AGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGTTGGACTCTGGTGGGTaGGGAGGCTTCCTGGTCACT +
Preference number: 4 (lower is better)
Translates to: RWLLGRLQHSQKGHCLLQLDSGG*GGFLVT
Trigger: AGTGACCAGGAAGCCTCCCCACCCACCAGAGTCCAA...CTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369805.7
CDS-3UTR TCA 90 bp TGTGGGGTTTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGCAGCCAGCCGTCCCTaGCCTGCAGGATCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: CGVCCKLGSRRGILGALMAASRP*PAGSSL
Trigger: AAGACTTGATCCTGCAGGTCAGGGACGGCTGGCTGC...CATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp ATAAATAGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTGTCCTGGCCTGGCTaGAGGCCTCCAAGTCGAGGT +
Preference number: 4 (lower is better)
Translates to: INRWLLGRLQHSQKGHCLLSWPG*RPPSRG
Trigger: ACCTCGACTTGGAGGCCTTCAGCCAGGCCAGGACAG...CAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCTATTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp AAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCCTGTCCTGGCCTGGCTaGAGGCCTCCAAGTCGAGGT +
Preference number: 4 (lower is better)
Translates to: KLGSRRGILGALMGIRSALSWPG*RPPSRG
Trigger: ACCTCGACTTGGAGGCCTTCAGCCAGGCCAGGACAG...GGCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp TTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGCCTGCAGCCAGTCTGTaGCCTCTTCAGGCCTCGAGC +
Preference number: 4 (lower is better)
Translates to: LLQTGIQKRNSRGSNGYQPAASL*PLQASS
Trigger: GCTCGAGGCCTGAAGAGGTCACAGACTGGCTGCAGG...CTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp CAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCGAGCAGGTGGTCCGGTaGTGGTGGTGGAAGGACAGC +
Preference number: 4 (lower is better)
Translates to: QTGIQKRNSRGSNGYQICEQVVR*WWWKDS
Trigger: GCTGTCCTTCCACCACCAGCACCGGACCACCTGCTC...GCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp AATTCTCGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTCCACACCCGGCCCTGTaGATCCATCTCGAACAGCTT +
Preference number: 4 (lower is better)
Translates to: NSRGSNGYQICHLASAGPPHPAL*IHLEQL
Trigger: AAGCTGTTCGAGATGGATGCACAGGGCCGGGTGTGG...AGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCGAGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TGTCCTGGCCTGGCTGAAGGCCTCCAAGTCGAGGTCTGCTTTGCTCCAGCTCTTCATTCATGGCCTGGATaGTGTCTAGGCGGTAAGAGT +
Preference number: 4 (lower is better)
Translates to: CPGLAEGLQVEVCFAPALHSWPG*CLGGKS
Trigger: ACTCTTACCGCCTAGACAGCATCCAGGCCATGAATG...AAGAGCTGGAGCAAAGCAGACCTCGACTTGGAGGCCTTCAGCCAGGCCAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR GCA 90 bp TGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGGCAGGCCCGGCTCCTaGACGGTGATGGACAGGATG +
Preference number: 4 (lower is better)
Translates to: CKLGSRRGILGALMGIRSGRPGS*TVMDRM
Trigger: CATCCTGTCCATCACCGTGCAGGAGCCGGGCCTGCC...AGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGCGGCTCCAGATAGCGTaGCTGCTCCATAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: LLQTGIQKRNSRGSNGYQRLQIA*LLHRER
Trigger: CCGCTCCCTATGGAGCAGGCACGCTATCTGGAGCCG...CTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGACGGCTCCAGATAGCGTaGCTGCTCCATAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: CCKLGSRRGILGALMGIRRLQIA*LLHRER
Trigger: CCGCTCCCTATGGAGCAGGCACGCTATCTGGAGCCG...TCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp AGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGATGGTGGGAGGCTGTaGTCTAGGGTCCTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RGILGALMGIRSAILHQRDGGRL*SRVLWW
Trigger: CCACCAGAGGACCCTAGAGCACAGCCTCCCACCATC...CCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp AGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGCCAGCCACCACCGCTTaGTGTGGTCCAGAACCTCCA +
Preference number: 4 (lower is better)
Translates to: RGILGALMGIRSAILHQRPATTA*CGPEPP
Trigger: TGGAGGTTCTGGACCACAGCAAGCGGTGGTGGCTGG...CCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTGGAGTGGAGAAGTTCTCTaGCTGCAGCCAGTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: YWGGSNTARRDTVCFSLWSGEVL*LQPVCD
Trigger: GTCACAGACTGGCTGCAGGCAGAGAACTTCTCCACT...CCAGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp AGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGTCAGATCTGCCATCTTaGATCAGCGGGGCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: RWLLGRLQHSQKGHCLLQSDLPS*ISGAWF
Trigger: GAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGA...CTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTGGAGAAGGGACACTGTTTaGTTCAGCCTCTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: YWGGSNTARRDTVCFSLWRRDTV*FSLWAC
Trigger: ACAGGCCCAGAGGCTGAAGCAAACAGTGTCCCTTCT...CCAGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TTGAAGAGGATGTGTACGAGCTCAGGGGCACTTGTCTCCTTCAGCCAGGTGGCCCTCCAAGTCGAGGTCTaGTTTGCTCCAGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LKRMCTSSGALVSFSQVALQVEV*FAPALP
Trigger: AGGAAGAGCTGGAGCAAAGCAGACCTCGACTTGGAG...GGCCACCTGGCTGAAGGAGACAAGTGCCCCTGAGCTCGTACACATCCTCTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR GCA 90 bp TGTAAGGGGACCATGGACTGTGCTCTAGGGTCCTCTGGTGGGGCTGTTCTGGAGCAAGACTATCTCCTCTaGTTGCCACTGAATCCTCCC +
Preference number: 4 (lower is better)
Translates to: CKGTMDCALGSSGGAVLEQDYLL*LPLNPP
Trigger: GGGAGGATTCAGTGGCAAGCAGAGGAGATAGTCTTG...CTCCAGAACAGCCCCACCAGAGGACCCTAGAGCACAGTCCATGGTCCCCTTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp TGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGACAGGTGGTCCGGTGCTaGTGGTGGAAGGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: CCKLGSRRGILGALMGIRQVVRC*WWKDSS
Trigger: GCTGCTGTCCTTCCACCACCAGCACCGGACCACCTG...TCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp CACAGTCAGTTCCCGTGGGTTCCTAGCTTCAAACTCGTACAAGACTTGCATTTTCTGAGGACGGCTCCCTaGGTGCCAGTGAAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: HSQFPWVPSFKLVQDLHFLRTAP*VPVKAG
Trigger: CCCGGCCTTCACTGGCACCCAGGGAGCCGTCCTCAG...AAAATGCAAGTCTTGTACGAGTTTGAAGCTAGGAACCCACGGGAACTGACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp CAGGGACTTGAAGAGGATGTGTACGAGCTCAGGGGCACTTGTCTCCTTCAGCCATCCGGTGCAAGTAAATaGCTCTGCTGCTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: QGLEEDVYELRGTCLLQPSGASK*LCCWAL
Trigger: CAAGGCCCAGCAGCAGAGCCATTTACTTGCACCGGA...TGGCTGAAGGAGACAAGTGCCCCTGAGCTCGTACACATCCTCTTCAAGTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp AAGGGTGCTTGGCTGGAGGGCTCTGGAAGTTGCCAGTCATCTGAGAATGTGGGTTCTGAGGTGAGGTTCTaGGAGTACTCCTTCCGGTGC +
Preference number: 4 (lower is better)
Translates to: KGAWLEGSGSCQSSENVGSEVRF*EYSFRC
Trigger: GCACCGGAAGGAGTACTCCCAGAACCTCACCTCAGA...ACCCACATTCTCAGATGACTGGCAACTTCCAGAGCCCTCCAGCCAAGCACCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp AATTCTCGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTTCTGCCCCCACTTCCTaGCACTGGAAGAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: NSRGSNGYQICHLASAGPSAPTS*HWKSRV
Trigger: CACTCTGCTCTTCCAGTGCCAGGAAGTGGGGGCAGA...AGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCGAGAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp AGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGGTTTTCTCGGGCACTGGTGTaGCGTGGCAGGGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: RRGTEQILDKPRHKCSRFSRALV*RGRGLG
Trigger: CCCAAGGCCCCTGCCACGCCACACCAGTGCCCGAGA...AAACCTGGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTTTGGTTCTCGGGCACTaGTGTGGCGTGGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: CKLGSRRGILGALMGIRSLVLGH*CGVAGA
Trigger: GGCCCCTGCCACGCCACACCAGTGCCCGAGAACCAA...AGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GAGCTGGGGTGTGGGGTTTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGCAGAGTAAAGGCACTTaGTTCTCGGGCACTGGTGTG +
Preference number: 4 (lower is better)
Translates to: ELGCGVCCKLGSRRGILGQSKGT*FSGTGV
Trigger: CACACCAGTGCCCGAGAACCAAGTGCCTTTACTCTG...CCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCCCACACCCCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp AGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGTCAATGTACTGTGCCTaGGTGAGACCTCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: RWLLGRLQHSQKGHCLLQSMYCA*VRPPWS
Trigger: GGACCAGGGAGGTCTCACCCAGGCACAGTACATTGA...CTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TGTGGGGTTTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGTCTCCTTCAGCCAGGTaGCCAGCCTTCCCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: CGVCCKLGSRRGILGALMSPSAR*PAFPGG
Trigger: ACCTCCTGGGAAGGCTGGCCACCTGGCTGAAGGAGA...CATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTGGTATCCTAAGGGTGCTTaGCTGGAGGGCTCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: YWGGSNTARRDTVCFSLWYPKGA*LEGSGS
Trigger: ACTTCCAGAGCCCTCCAGCCAAGCACCCTTAGGATA...CCAGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp CAGGATGTTGCTTGGAATGTAGCCGCTCCGTCCCGCCTCATTCTTCACCAGCCATATCCTAAGGGTGCTTaGCTGGAGGGCTCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: QDVAWNVAAPSRLILHQPYPKGA*LEGSGS
Trigger: ACTTCCAGAGCCCTCCAGCCAAGCACCCTTAGGATA...TGGCTGGTGAAGAATGAGGCGGGACGGAGCGGCTACATTCCAAGCAACATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp GATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTGTCTAAGCTGGTGAGGGAAACAGGGTCCTaGTATCCTAAGGGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: DLPSCISGAWFLEVSKLVRETGS*YPKGAW
Trigger: CCAAGCACCCTTAGGATACCAGGACCCTGTTTCCCT...CACCAGCTTAGACACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GCATGCAATAATACGGTCCGAATCAAACCAAGACTATCTCCTCTGCTTGCCACTACCCGAGAGGGTGACTaGCCCTGGGTCCCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: ACNNTVRIKPRLSPLLATTREGD*PWVPGV
Trigger: GACCCCTGGGACCCAGGGCCAGTCACCCTCTCGGGT...AGTGGCAAGCAGAGGAGATAGTCTTGGTTTGATTCGGACCGTATTATTGCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp AGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGTCCTCACCGTGGCAGTaGAGAAGTTCTCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: RWLLGRLQHSQKGHCLLQSSPWQ*RSSLPA
Trigger: TGCAGGCAGAGAACTTCTCCACTGCCACGGTGAGGA...CTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp CGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTCAAGTGTCCTCACCGTaGCAGTGGAGAAGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: RGSNGYQICHLASAGPGSQVSSP*QWRSSL
Trigger: CAGAGAACTTCTCCACTGCCACGGTGAGGACACTTG...AGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTGTCTAAGCTGGTGTGGAGGTGTCTAAGCTaGTGCCTAAGGGCTTATCCC +
Preference number: 4 (lower is better)
Translates to: DLPSCISGAWFLEVSKLVWRCLS*CLRAYP
Trigger: GGGATAAGCCCTTAGGCACCAGCTTAGACACCTCCA...CACCAGCTTAGACACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GAGCTGGGGTGTGGGGTTTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGTGGAGGTGTCTAAGCTaGTGCCTAAGGGCTTATCCC +
Preference number: 4 (lower is better)
Translates to: ELGCGVCCKLGSRRGILGWRCLS*CLRAYP
Trigger: GGGATAAGCCCTTAGGCACCAGCTTAGACACCTCCA...CCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCCCACACCCCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTTGCATCAGCGGGGCCTaGTTCTTGGAGGTGTCTAAG +
Preference number: 4 (lower is better)
Translates to: GALMGIRSAILHQRGLVLCISGA*FLEVSK
Trigger: CTTAGACACCTCCAAGAACCAGGCCCCGCTGATGCA...AAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
3UTR CAA 72 bp CTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTaGCTTCAGCCTCTGGGCCTGTCCATTGTTTTTGCT +
Preference number: 4 (lower is better)
Translates to: LGRLQHSQKGHC*LQPLGLSIVFA
Trigger: AGCAAAAACAATGGACAGGCCCAGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp TGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGACAGGAGGGTGGGCTCTaGGGTGAGGTTCTGGGAGTA +
Preference number: 4 (lower is better)
Translates to: CCKLGSRRGILGALMGIRQEGGL*GEVLGV
Trigger: TACTCCCAGAACCTCACCTCAGAGCCCACCCTCCTG...TCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp CGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGTAGGAACATGTGTTaGGCGCCACATTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: RGSNGYQICHLASAGPGSCRNMC*APHSWP
Trigger: AGGCCATGAATGTGGCGCTCAACACATGTTCCTACA...AGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp GATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTGTCTAAGCTGGTGTGTAGGAACATGTGTTaGGCGCCACATTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: DLPSCISGAWFLEVSKLVCRNMC*APHSWP
Trigger: AGGCCATGAATGTGGCGCTCAACACATGTTCCTACA...CACCAGCTTAGACACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp GATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTGTCTAAGCTGGTGAAGTTGCCAGTCATCTaGGAATGTGGGTTGGTAGGG +
Preference number: 4 (lower is better)
Translates to: DLPSCISGAWFLEVSKLVKLPVI*ECGLVG
Trigger: CCCTACCAACCCACATTCTCAGATGACTGGCAACTT...CACCAGCTTAGACACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp TACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTGGTTGTGTGTCTTCTCCTaGGGAAAGTGTGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: YWGGSNTARRDTVCFSLWLCVFS*GKCEVL
Trigger: GAGCACCTCACACTTTCCTCAGGAGAAGACACACAA...CCAGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp CGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTTGTGTGTCTTCTCCTaGGGAAAGTGTGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: RGSNGYQICHLASAGPGSLCVFS*GKCEVL
Trigger: GAGCACCTCACACTTTCCTCAGGAGAAGACACACAA...AGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp ATAAATAGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGTCAATGTCCAGCAGCTaGAGCCAGCCGTCCCTGACC +
Preference number: 4 (lower is better)
Translates to: INRWLLGRLQHSQKGHCLSMSSS*SQPSLT
Trigger: GGTCAGGGACGGCTGGCTGCAGCTGCTGGACATTGA...CAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCTATTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCGGCAGGCCCGGCTCCTaGACGGTGATGGACAGGATG +
Preference number: 4 (lower is better)
Translates to: LRRRGTEQILDKPRHKCSGRPGS*TVMDRM
Trigger: CATCCTGTCCATCACCGTGCAGGAGCCGGGCCTGCC...GGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp CAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCGGTCTTCAGTCGCTCTaGCCCCACTTCCTGGCACTG +
Preference number: 4 (lower is better)
Translates to: QTGIQKRNSRGSNGYQICGLQSL*PHFLAL
Trigger: CAGTGCCAGGAAGTGGGGGCAGAGCGACTGAAGACC...GCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp AAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCGATGGTGGGAGGCTGTaGTCTAGGGTCCTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: KLGSRRGILGALMGIRSADGGRL*SRVLWW
Trigger: CCACCAGAGGACCCTAGAGCACAGCCTCCCACCATC...GGCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTGGGAGGGCTCTGGAAGTTaGCAGTCATCTGAGAATGTG +
Preference number: 4 (lower is better)
Translates to: YWGGSNTARRDTVCFSLWEGSGS*QSSENV
Trigger: CACATTCTCAGATGACTGGCAACTTCCAGAGCCCTC...CCAGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp CAGGATGTTGCTTGGAATGTAGCCGCTCCGTCCCGCCTCATTCTTCACCAGCCAGAGGGCTCTGGAAGTTaGCAGTCATCTGAGAATGTG +
Preference number: 4 (lower is better)
Translates to: QDVAWNVAAPSRLILHQPEGSGS*QSSENV
Trigger: CACATTCTCAGATGACTGGCAACTTCCAGAGCCCTC...TGGCTGGTGAAGAATGAGGCGGGACGGAGCGGCTACATTCCAAGCAACATCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR GCA 90 bp TGTAAGGGGACCATGGACTGTGCTCTAGGGTCCTCTGGTGGGGCTGTTCTGGAGAACTCGTACAAGACTTaGATTTTCAGGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: CKGTMDCALGSSGGAVLENSYKT*IFRAGW
Trigger: CCAGCCAGCCCTGAAAATGCAAGTCTTGTACGAGTT...CTCCAGAACAGCCCCACCAGAGGACCCTAGAGCACAGTCCATGGTCCCCTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR GCA 90 bp GTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTAGTGGAGAAGTTCTCTaGCTGCAGCCAGTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: VTGEAPTQPEGTLFASASSGEVL*LQPVCD
Trigger: GTCACAGACTGGCTGCAGGCAGAGAACTTCTCCACT...AGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp AATTCTCGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTTCAGATCTGCCATCTTaGATCAGCGGGGCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: NSRGSNGYQICHLASAGPSDLPS*ISGAWF
Trigger: GAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGA...AGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCGAGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTGGAATGGGTATCAGATCTaGCATCTTGCATCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: YWGGSNTARRDTVCFSLWNGYQI*HLASAG
Trigger: CCCCGCTGATGCAAGATGGCAGATCTGATACCCATT...CCAGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp GGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGGTGTGGGGTTTGCTaGAAACTGGGATCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: GALMGIRSAILHQRGLVLGCGVC*KLGSRR
Trigger: TCTTCTGGATCCCAGTTTGCAGCAAACCCCACACCC...AAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGAGGCAGCCACGCCTGTaGTCTTTGGACTCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LLQTGIQKRNSRGSNGYQRQPRL*SLDSGG
Trigger: CCCACCAGAGTCCAAAGAGCACAGGCGTGGCTGCCT...CTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369805.7
CDS-3UTR CCA 90 bp TTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGGTGGTCCGGTGCTGGTaGTGGAAGGACAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LLQTGIQKRNSRGSNGYQVVRCW*WKDSSF
Trigger: GAAGCTGCTGTCCTTCCACCACCAGCACCGGACCAC...CTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTCCAGGAGGCTGGTCTTaGAGCAGGTGGTCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: CKLGSRRGILGALMGIRSPGGWS*SRWSGA
Trigger: AGCACCGGACCACCTGCTCCAAGACCAGCCTCCTGG...AGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp CTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTTCTGAGGTGAGGTTCTaGGAGTACTCCTTCCGGTGC +
Preference number: 4 (lower is better)
Translates to: LMGIRSAILHQRGLVLGGSEVRF*EYSFRC
Trigger: GCACCGGAAGGAGTACTCCCAGAACCTCACCTCAGA...ACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TGTGGGGTTTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGTGCAGGATCAAGTCTTaGCTCCACACCCGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: CGVCCKLGSRRGILGALMCRIKS*LHTRPC
Trigger: ACAGGGCCGGGTGTGGAGCCAAGACTTGATCCTGCA...CATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCCAGAGTGCTAGTGCCTaGCAGGCCCGGCTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: LRRRGTEQILDKPRHKCSQSASA*QARLLH
Trigger: GTGCAGGAGCCGGGCCTGCCAGGCACTAGCACTCTG...GGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp AATTCTCGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTCCCACTTCCTGGCACTaGAAGAGCAGAGTGCTAGTG +
Preference number: 4 (lower is better)
Translates to: NSRGSNGYQICHLASAGPPTSWH*KSRVLV
Trigger: CACTAGCACTCTGCTCTTCCAGTGCCAGGAAGTGGG...AGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCGAGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATGCTCTAGGGTCCTCTaGTGGGGCTGTTCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: CCKLGSRRGILGALMGIRCSRVL*WGCSGG
Trigger: CCCTCCAGAACAGCCCCACCAGAGGACCCTAGAGCA...TCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTCAGAGTAAAGGCACTTaGTTCTCGGGCACTGGTGTG +
Preference number: 4 (lower is better)
Translates to: VTGEAPTQPEGTLFASASQSKGT*FSGTGV
Trigger: CACACCAGTGCCCGAGAACCAAGTGCCTTTACTCTG...AGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TGTCCTGGCCTGGCTGAAGGCCTCCAAGTCGAGGTCTGCTTTGCTCCAGCTCTTATTTCTTCTTCCTGCTaGTCTTTGCCTGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: CPGLAEGLQVEVCFAPALISSSC*SLPGPS
Trigger: AGAAGGCCCAGGCAAAGACCAGCAGGAAGAAGAAAT...AAGAGCTGGAGCAAAGCAGACCTCGACTTGGAGGCCTTCAGCCAGGCCAGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp TGTGGGGTTTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGCTAAGGGTGCTTGGCTaGAGGGCTCTGGAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: CGVCCKLGSRRGILGALMLRVLG*RALEVA
Trigger: GGCAACTTCCAGAGCCCTCCAGCCAAGCACCCTTAG...CATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTTATCCTAAGGGTGCTTaGCTGGAGGGCTCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: GALMGIRSAILHQRGLVLYPKGA*LEGSGS
Trigger: ACTTCCAGAGCCCTCCAGCCAAGCACCCTTAGGATA...AAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTAGGGAAACAGGGTCCTaGTATCCTAAGGGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: VTGEAPTQPEGTLFASASRETGS*YPKGAW
Trigger: CCAAGCACCCTTAGGATACCAGGACCCTGTTTCCCT...AGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp CTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTTGCATCAGCGGGGCCTaGTTCTTGGAGGTGTCTAAG +
Preference number: 4 (lower is better)
Translates to: LMGIRSAILHQRGLVLGGCISGA*FLEVSK
Trigger: CTTAGACACCTCCAAGAACCAGGCCCCGCTGATGCA...ACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp CAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCACGCCTGTGCTCTTTaGACTCTGGTGGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: QTGIQKRNSRGSNGYQICHACAL*TLVGGE
Trigger: CTCCCCACCCACCAGAGTCCAAAGAGCACAGGCGTG...GCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369805.7
3UTR CAA 72 bp TTCCCGTGGGTTCCTAGCTTCAAACTCGTACAAGACTaGCATTTTCAGGGCTGGCTGGGCAGGTTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: FPWVPSFKLVQD*HFQGWLGRFGA
Trigger: AGCCCCAAACCTGCCCAGCCAGCCCTGAAAATGCAAGTCTTGTACGAGTTTGAAGCTAGGAACCCACGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR TCA 90 bp CAGGGACTTGAAGAGGATGTGTACGAGCTCAGGGGCACTTGTCTCCTTCAGCCATGTAGGAACATGTGTTaGGCGCCACATTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: QGLEEDVYELRGTCLLQPCRNMC*APHSWP
Trigger: AGGCCATGAATGTGGCGCTCAACACATGTTCCTACA...TGGCTGAAGGAGACAAGTGCCCCTGAGCTCGTACACATCCTCTTCAAGTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR TCA 90 bp TGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTCCGGCTCCTGCACGGTaGTGGACAGGATGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: CKLGSRRGILGALMGIRSPAPAR*WTGWSC
Trigger: ACAACTCCATCCTGTCCATCACCGTGCAGGAGCCGG...AGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp GCTCTGGAAGTTGCCAGTCATCTGAGAATGTGGGTTGGTAGGGCAGGGGCTCATAAGTTGCCAGTCATCTaGGAATGTGGGTTGGTAGGG +
Preference number: 4 (lower is better)
Translates to: ALEVASHLRMWVGRAGAHKLPVI*ECGLVG
Trigger: CCCTACCAACCCACATTCTCAGATGACTGGCAACTT...ATGAGCCCCTGCCCTACCAACCCACATTCTCAGATGACTGGCAACTTCCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR GCA 90 bp TGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGACCACACCCGGCCCTGTaGATCCATCTCGAACAGCTT +
Preference number: 4 (lower is better)
Translates to: CCKLGSRRGILGALMGIRPHPAL*IHLEQL
Trigger: AAGCTGTTCGAGATGGATGCACAGGGCCGGGTGTGG...TCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGACAGCCGTCCCTGACCTaGAGGATCAAGTCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: CCKLGSRRGILGALMGIRQPSLT*RIKSWL
Trigger: GAGCCAAGACTTGATCCTGCAGGTCAGGGACGGCTG...TCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp AGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCATTCATGGCCTGGATaGTGTCTAGGCGGTAAGAGT +
Preference number: 4 (lower is better)
Translates to: RWLLGRLQHSQKGHCLLQHSWPG*CLGGKS
Trigger: ACTCTTACCGCCTAGACAGCATCCAGGCCATGAATG...CTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp CTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTCCAAGTCGAGGTCTTTaGTCCAGCTCTTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LMGIRSAILHQRGLVLGGPSRGL*SSSSSR
Trigger: TCTGGAGGAAGAGCTGGAGCAAAGACCTCGACTTGG...ACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361852.8
ENST00000361965.9
CDS-3UTR GCA 90 bp TACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTGGAGGAGGTTGAAGCTGTaGTTGATCTTCTGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: YWGGSNTARRDTVCFSLWRRLKL*LIFWKQ
Trigger: CTGCTTCCAGAAGATCAAGCACAGCTTCAACCTCCT...CCAGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp ATAAATAGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGGGGGCTCCAGGATGTTaGTTGGAATGTAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: INRWLLGRLQHSQKGHCLGAPGC*LECSRS
Trigger: GGAGCGGCTACATTCCAAGCAACATCCTGGAGCCCC...CAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCTATTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp CAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCGGGGCTCCAGGATGTTaGTTGGAATGTAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: QTGIQKRNSRGSNGYQICGAPGC*LECSRS
Trigger: GGAGCGGCTACATTCCAAGCAACATCCTGGAGCCCC...GCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp AGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGAATGGGTATCAGATCTaGCATCTTGCATCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: RWLLGRLQHSQKGHCLLQNGYQI*HLASAG
Trigger: CCCCGCTGATGCAAGATGGCAGATCTGATACCCATT...CTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp GGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTCCTGTCCATTGTTTTTaGTGTGTGAGCTGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: GALMGIRSAILHQRGLVLPVHCF*CVSWGV
Trigger: CACACCCCAGCTCACACAGCAAAAACAATGGACAGG...AAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp AGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGTCTGAGGTGAGGTTCTaGGAGTACTCCTTCCGGTGC +
Preference number: 4 (lower is better)
Translates to: RGILGALMGIRSAILHQRSEVRF*EYSFRC
Trigger: GCACCGGAAGGAGTACTCCCAGAACCTCACCTCAGA...CCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp AAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCTCTGCCCCCACTTCCTaGCACTGGAAGAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: KLGSRRGILGALMGIRSASAPTS*HWKSRV
Trigger: CACTCTGCTCTTCCAGTGCCAGGAAGTGGGGGCAGA...GGCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTAGGGTCCTCTGGTaGGGCTGTTCTGGAGGGATC +
Preference number: 4 (lower is better)
Translates to: CCKLGSRRGILGALMGIRSRVLW*GCSGGI
Trigger: GATCCCTCCAGAACAGCCCCACCAGAGGACCCTAGA...TCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp ATAAATAGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGGGAAGAGGACCGCCTTaGAGGAGGCAGAGTAAAGGC +
Preference number: 4 (lower is better)
Translates to: INRWLLGRLQHSQKGHCLGRGPP*RRQSKG
Trigger: GCCTTTACTCTGCCTCCTCCAAGGCGGTCCTCTTCC...CAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCTATTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp CAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCAGGGGTGAGATCACTTaGGCTGCTAGGCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: QTGIQKRNSRGSNGYQICRGEIT*AARPAS
Trigger: TGAGGCTGGCCTAGCAGCCCAAGTGATCTCACCCCT...GCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp AATACGGTCCGAATCAAACCAAGACTATCTCCTCTGCTTGCCACTGAATCCTCCGCTAGTGGTCCAGGCTaGGCCCAACCCCATCCAAAG +
Preference number: 4 (lower is better)
Translates to: NTVRIKPRLSPLLATESSASGPG*AQPHPK
Trigger: CTTTGGATGGGGTTGGGCCCAGCCTGGACCACTAGC...GGAGGATTCAGTGGCAAGCAGAGGAGATAGTCTTGGTTTGATTCGGACCGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp AAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCCTAAGGGTGCTTGGCTaGAGGGCTCTGGAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: KLGSRRGILGALMGIRSALRVLG*RALEVA
Trigger: GGCAACTTCCAGAGCCCTCCAGCCAAGCACCCTTAG...GGCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGACTAAGGGTGCTTGGCTaGAGGGCTCTGGAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: CCKLGSRRGILGALMGIRLRVLG*RALEVA
Trigger: GGCAACTTCCAGAGCCCTCCAGCCAAGCACCCTTAG...TCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp AGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCACAGTCAGTTCCCGTaGGTTCCTAGCTTCAAACTC +
Preference number: 4 (lower is better)
Translates to: RWLLGRLQHSQKGHCLLQHSQFP*VPSFKL
Trigger: GAGTTTGAAGCTAGGAACCCACGGGAACTGACTGTG...CTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp CCTAAGGGTGCTTGGCTGGAGGGCTCTGGAAGTTGCCAGTCATCTGAGAATGTGCACAGTCAGTTCCCGTaGGTTCCTAGCTTCAAACTC +
Preference number: 4 (lower is better)
Translates to: PKGAWLEGSGSCQSSENVHSQFP*VPSFKL
Trigger: GAGTTTGAAGCTAGGAACCCACGGGAACTGACTGTG...CACATTCTCAGATGACTGGCAACTTCCAGAGCCCTCCAGCCAAGCACCCTTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp TTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGCACCACCGCTTGCTGTaGTCCAGAACCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LLQTGIQKRNSRGSNGYQHHRLL*SRTSSF
Trigger: GAAGCTGGAGGTTCTGGACCACAGCAAGCGGTGGTG...CTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TGTGGGGTTTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGCTCCAGGATGTTGCTTaGAATGTAGCCGCTCCGTCC +
Preference number: 4 (lower is better)
Translates to: CGVCCKLGSRRGILGALMLQDVA*NVAAPS
Trigger: GGACGGAGCGGCTACATTCCAAGCAACATCCTGGAG...CATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp ATAAATAGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTATGCGAAGTAGCTaGCTCCCCGTCAGGGACCCA +
Preference number: 4 (lower is better)
Translates to: INRWLLGRLQHSQKGHCLLMRSS*LPVRDP
Trigger: TGGGTCCCTGACGGGGAGCCAGCTACTTCGCATAAG...CAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCTATTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGACTTATGCGAAGTAGCTaGCTCCCCGTCAGGGACCCA +
Preference number: 4 (lower is better)
Translates to: CCKLGSRRGILGALMGIRLMRSS*LPVRDP
Trigger: TGGGTCCCTGACGGGGAGCCAGCTACTTCGCATAAG...TCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GAGCTGGGGTGTGGGGTTTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGTTTGCTTCAGCCTCTaGGCCTGTCCATTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: ELGCGVCCKLGSRRGILGVCFSL*ACPLFL
Trigger: CAAAAACAATGGACAGGCCCAGAGGCTGAAGCAAAC...CCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCCCACACCCCAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GAAAGAGGTAAAATAAATAGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGGGGCAGGTTTGGGGCTaGAGGGCCGAAGGGAAACAG +
Preference number: 4 (lower is better)
Translates to: ERGKINRWLLGRLQHSQKGQVWG*RAEGKQ
Trigger: CTGTTTCCCTTCGGCCCTCCAGCCCCAAACCTGCCC...CTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCTATTTATTTTACCTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361852.8
CDS-3UTR TCA 90 bp TGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTTCTGCTGCTGGGCCTTaGCATGTTGACGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: CKLGSRRGILGALMGIRSSAAGP*HVDAAE
Trigger: CTCAGCAGCGTCAACATGTCAAGGCCCAGCAGCAGA...AGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp AGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGGTTTGCAGCCAGCCGTCCCTaGCCTGCAGGATCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: RRGTEQILDKPRHKCSRFAASRP*PAGSSL
Trigger: AAGACTTGATCCTGCAGGTCAGGGACGGCTGGCTGC...AAACCTGGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp AATACGGTCCGAATCAAACCAAGACTATCTCCTCTGCTTGCCACTGAATCCTCCCCACACCCGGCCCTGTaGATCCATCTCGAACAGCTT +
Preference number: 4 (lower is better)
Translates to: NTVRIKPRLSPLLATESSPHPAL*IHLEQL
Trigger: AAGCTGTTCGAGATGGATGCACAGGGCCGGGTGTGG...GGAGGATTCAGTGGCAAGCAGAGGAGATAGTCTTGGTTTGATTCGGACCGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR GCA 90 bp GAAAGAGGTAAAATAAATAGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGTCAATGTCCAGCAGCTaGAGCCAGCCGTCCCTGACC +
Preference number: 4 (lower is better)
Translates to: ERGKINRWLLGRLQHSQKSMSSS*SQPSLT
Trigger: GGTCAGGGACGGCTGGCTGCAGCTGCTGGACATTGA...CTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCTATTTATTTTACCTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp CTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTCATTCATGGCCTGGATaGTGTCTAGGCGGTAAGAGT +
Preference number: 4 (lower is better)
Translates to: LMGIRSAILHQRGLVLGGHSWPG*CLGGKS
Trigger: ACTCTTACCGCCTAGACAGCATCCAGGCCATGAATG...ACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCGGTCTTCAGTCGCTCTaGCCCCACTTCCTGGCACTG +
Preference number: 4 (lower is better)
Translates to: LRRRGTEQILDKPRHKCSGLQSL*PHFLAL
Trigger: CAGTGCCAGGAAGTGGGGGCAGAGCGACTGAAGACC...GGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTTCCTCCAGAGCCTTCTaGAGGCTGGTCTTCAGTCGC +
Preference number: 4 (lower is better)
Translates to: CKLGSRRGILGALMGIRSSSRAF*RLVFSR
Trigger: GCGACTGAAGACCAGCCTGCAGAAGGCTCTGGAGGA...AGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp GCTCTGGAAGTTGCCAGTCATCTGAGAATGTGGGTTGGTAGGGCAGGGGCTCATAGGAGGTTGAAGCTGTaGTTGATCTTCTGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: ALEVASHLRMWVGRAGAHRRLKL*LIFWKQ
Trigger: CTGCTTCCAGAAGATCAAGCACAGCTTCAACCTCCT...ATGAGCCCCTGCCCTACCAACCCACATTCTCAGATGACTGGCAACTTCCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR GCA 90 bp TTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCCCAGCCACCACCGCTTaGTGTGGTCCAGAACCTCCA +
Preference number: 4 (lower is better)
Translates to: LRRRGTEQILDKPRHKCSPATTA*CGPEPP
Trigger: TGGAGGTTCTGGACCACAGCAAGCGGTGGTGGCTGG...GGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp AGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGAGAAGTTCTCTGCCTaGAGCCAGTCTGTGACCTCT +
Preference number: 4 (lower is better)
Translates to: RGILGALMGIRSAILHQREKFSA*SQSVTS
Trigger: AGAGGTCACAGACTGGCTGCAGGCAGAGAACTTCTC...CCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TGTGGGGTTTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGAGAAGGGACACTGTTTaGTTCAGCCTCTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: CGVCCKLGSRRGILGALMRRDTV*FSLWAC
Trigger: ACAGGCCCAGAGGCTGAAGCAAACAGTGTCCCTTCT...CATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp AGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGAGTCGAGGTCTGCTTTaGTCCAGCTCTTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: RGILGALMGIRSAILHQRSRGLL*SSSSSR
Trigger: TCTGGAGGAAGAGCTGGAGCAAAGCAGACCTCGACT...CCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369805.7
CDS-3UTR GCA 90 bp GCATGCAATAATACGGTCCGAATCAAACCAAGACTATCTCCTCTGCTTGCCACTGGGGACCATGGACTGTaGTCTAGGGTCCTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: ACNNTVRIKPRLSPLLATGDHGL*SRVLWW
Trigger: CCACCAGAGGACCCTAGAGCACAGTCCATGGTCCCC...AGTGGCAAGCAGAGGAGATAGTCTTGGTTTGATTCGGACCGTATTATTGCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp TTGAAGATGCTTTTATTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTCTGAGGACGGCTCCCTaGGTGCCAGTGAAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LKMLLLRRRGTEQILDKPLRTAP*VPVKAG
Trigger: CCCGGCCTTCACTGGCACCCAGGGAGCCGTCCTCAG...AGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAATAAAAGCATCTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp CAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCTCCGGTGCAAGTAAATaGCTCTGCTGCTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: QTGIQKRNSRGSNGYQICSGASK*LCCWAL
Trigger: CAAGGCCCAGCAGCAGAGCCATTTACTTGCACCGGA...GCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp CAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCTCTGAGGTGAGGTTCTaGGAGTACTCCTTCCGGTGC +
Preference number: 4 (lower is better)
Translates to: QTGIQKRNSRGSNGYQICSEVRF*EYSFRC
Trigger: GCACCGGAAGGAGTACTCCCAGAACCTCACCTCAGA...GCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TGTGGGGTTTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGCAGAGTAAAGGCACTTaGTTCTCGGGCACTGGTGTG +
Preference number: 4 (lower is better)
Translates to: CGVCCKLGSRRGILGALMQSKGT*FSGTGV
Trigger: CACACCAGTGCCCGAGAACCAAGTGCCTTTACTCTG...CATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp AGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGAGTCATCTGAGAATGTaGGTTGGTAGGGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: RGILGALMGIRSAILHQRSHLRM*VGRAGA
Trigger: AGCCCCTGCCCTACCAACCCACATTCTCAGATGACT...CCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp ATAAATAGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGTTGCATTTTCAGGGCTaGCTGGGCAGGTTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: INRWLLGRLQHSQKGHCLLHFQG*LGRFGA
Trigger: AGCCCCAAACCTGCCCAGCCAGCCCTGAAAATGCAA...CAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCTATTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATTGCATTTTCAGGGCTaGCTGGGCAGGTTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: CCKLGSRRGILGALMGIRLHFQG*LGRFGA
Trigger: AGCCCCAAACCTGCCCAGCCAGCCCTGAAAATGCAA...TCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp AATTCTCGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTCACAGTCAGTTCCCGTaGGTTCCTAGCTTCAAACTC +
Preference number: 4 (lower is better)
Translates to: NSRGSNGYQICHLASAGPHSQFP*VPSFKL
Trigger: GAGTTTGAAGCTAGGAACCCACGGGAACTGACTGTG...AGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCGAGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGTCCTCACCGTGGCAGTaGAGAAGTTCTCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LLQTGIQKRNSRGSNGYQSSPWQ*RSSLPA
Trigger: TGCAGGCAGAGAACTTCTCCACTGCCACGGTGAGGA...CTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp AGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGTGTAGGAACATGTGTTaGGCGCCACATTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: RGILGALMGIRSAILHQRCRNMC*APHSWP
Trigger: AGGCCATGAATGTGGCGCTCAACACATGTTCCTACA...CCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp AATTCTCGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTTCTCCAGCTTTCCCATaGACAGCTCAATGTCCCTTA +
Preference number: 4 (lower is better)
Translates to: NSRGSNGYQICHLASAGPSPAFP*TAQCPL
Trigger: TAAGGGACATTGAGCTGTTCATGGGAAAGCTGGAGA...AGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCGAGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp TTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCGTGCTCCCTAACCTATaGCTTCCCCGCCGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: LRRRGTEQILDKPRHKCSVLPNL*LPRRRE
Trigger: TTCCCTTCGGCGGGGAAGTCATAGGTTAGGGAGCAC...GGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp AGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGGTTTGTGCTCCCTAACCTATaGCTTCCCCGCCGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: RRGTEQILDKPRHKCSRFVLPNL*LPRRRE
Trigger: TTCCCTTCGGCGGGGAAGTCATAGGTTAGGGAGCAC...AAACCTGGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp AATTCTCGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGAGGAAAGTGTGAGGTaGTCCCTAACCTATGACTTC +
Preference number: 4 (lower is better)
Translates to: NSRGSNGYQICHLASAGPEESVR*SLTYDF
Trigger: GAAGTCATAGGTTAGGGAGCACCTCACACTTTCCTC...AGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCGAGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp AAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCGAGAAGTTCTCTGCCTaGAGCCAGTCTGTGACCTCT +
Preference number: 4 (lower is better)
Translates to: KLGSRRGILGALMGIRSAEKFSA*SQSVTS
Trigger: AGAGGTCACAGACTGGCTGCAGGCAGAGAACTTCTC...GGCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGGAGAAGTTCTCTGCCTaGAGCCAGTCTGTGACCTCT +
Preference number: 4 (lower is better)
Translates to: LLQTGIQKRNSRGSNGYQEKFSA*SQSVTS
Trigger: AGAGGTCACAGACTGGCTGCAGGCAGAGAACTTCTC...CTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGAAGTGGAGAAGTTCTCTaGCTGCAGCCAGTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: CCKLGSRRGILGALMGIRSGEVL*LQPVCD
Trigger: GTCACAGACTGGCTGCAGGCAGAGAACTTCTCCACT...TCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGAAGGTGTCTAAGCTGGTaGCTAAGGGCTTATCCCCAG +
Preference number: 4 (lower is better)
Translates to: CCKLGSRRGILGALMGIRRCLSW*LRAYPQ
Trigger: CTGGGGATAAGCCCTTAGGCACCAGCTTAGACACCT...TCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTTCAGATCTGCCATCTTaGATCAGCGGGGCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: CKLGSRRGILGALMGIRSSDLPS*ISGAWF
Trigger: GAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGA...AGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TGTGGGGTTTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGAATGGGTATCAGATCTaGCATCTTGCATCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: CGVCCKLGSRRGILGALMNGYQI*HLASAG
Trigger: CCCCGCTGATGCAAGATGGCAGATCTGATACCCATT...CATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp ATAAATAGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGGGGTGTGGGGTTTGCTaGAAACTGGGATCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: INRWLLGRLQHSQKGHCLGCGVC*KLGSRR
Trigger: TCTTCTGGATCCCAGTTTGCAGCAAACCCCACACCC...CAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCTATTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp AGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGCCTGTCCATTGTTTTTaGTGTGTGAGCTGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: RGILGALMGIRSAILHQRPVHCF*CVSWGV
Trigger: CACACCCCAGCTCACACAGCAAAAACAATGGACAGG...CCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp ACAAGCTTGAAGATGCTTTTATTGAGAAGGAGAGGGACTGAACAGATTCTTGACCAGAGTGCTAGTGCCTaGCAGGCCCGGCTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: TSLKMLLLRRRGTEQILDQSASA*QARLLH
Trigger: GTGCAGGAGCCGGGCCTGCCAGGCACTAGCACTCTG...GTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAATAAAAGCATCTTCAAGCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361852.8
ENST00000361965.9
CDS-3UTR CCA 90 bp TTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCTCTAGGGTCCTCTGGTaGGGCTGTTCTGGAGGGATC +
Preference number: 4 (lower is better)
Translates to: LRRRGTEQILDKPRHKCSSRVLW*GCSGGI
Trigger: GATCCCTCCAGAACAGCCCCACCAGAGGACCCTAGA...GGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp ACAAGCTTGAAGATGCTTTTATTGAGAAGGAGAGGGACTGAACAGATTCTTGACTTGGTTCTCGGGCACTaGTGTGGCGTGGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: TSLKMLLLRRRGTEQILDLVLGH*CGVAGA
Trigger: GGCCCCTGCCACGCCACACCAGTGCCCGAGAACCAA...GTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAATAAAAGCATCTTCAAGCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361852.8
ENST00000361965.9
CDS-3UTR CCA 90 bp TTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCCTGCTGGTCTTTGCCTaGGCCTTCTCCAGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: LRRRGTEQILDKPRHKCSLLVFA*AFSSFP
Trigger: GGGAAAGCTGGAGAAGGCCCAGGCAAAGACCAGCAG...GGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp AGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGGTTTCTGCTGGTCTTTGCCTaGGCCTTCTCCAGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: RRGTEQILDKPRHKCSRFLLVFA*AFSSFP
Trigger: GGGAAAGCTGGAGAAGGCCCAGGCAAAGACCAGCAG...AAACCTGGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp CTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTATTTCTTCTTCCTGCTaGTCTTTGCCTGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LMGIRSAILHQRGLVLGGISSSC*SLPGPS
Trigger: AGAAGGCCCAGGCAAAGACCAGCAGGAAGAAGAAAT...ACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp AGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGGTTTAGGGGTGAGATCACTTaGGCTGCTAGGCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: RRGTEQILDKPRHKCSRFRGEIT*AARPAS
Trigger: TGAGGCTGGCCTAGCAGCCCAAGTGATCTCACCCCT...AAACCTGGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TTGAAGATGCTTTTATTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTGGGCAGGTTTGGGGCTaGAGGGCCTGGAGTTGGGGT +
Preference number: 4 (lower is better)
Translates to: LKMLLLRRRGTEQILDKPGQVWG*RAWSWG
Trigger: ACCCCAACTCCAGGCCCTCCAGCCCCAAACCTGCCC...AGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAATAAAAGCATCTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp AGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGCACAGTCAGTTCCCGTaGGTTCCTAGCTTCAAACTC +
Preference number: 4 (lower is better)
Translates to: RGILGALMGIRSAILHQRHSQFP*VPSFKL
Trigger: GAGTTTGAAGCTAGGAACCCACGGGAACTGACTGTG...CCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp CAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCAAGTGTCCTCACCGTaGCAGTGGAGAAGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: QTGIQKRNSRGSNGYQICQVSSP*QWRSSL
Trigger: CAGAGAACTTCTCCACTGCCACGGTGAGGACACTTG...GCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGTGGAGGTGTCTAAGCTaGTGCCTAAGGGCTTATCCC +
Preference number: 4 (lower is better)
Translates to: LLQTGIQKRNSRGSNGYQWRCLS*CLRAYP
Trigger: GGGATAAGCCCTTAGGCACCAGCTTAGACACCTCCA...CTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp CTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTGGGTTTGCTGCAAACTaGGATCCAGAAGAGGAATTC +
Preference number: 4 (lower is better)
Translates to: LMGIRSAILHQRGLVLGGGFAAN*DPEEEF
Trigger: GAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCC...ACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp AAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCTTTTGCTGTGTGAGCTaGGGTGTGGGGTTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: KLGSRRGILGALMGIRSAFCCVS*GVGFAA
Trigger: TGCAGCAAACCCCACACCCCAGCTCACACAGCAAAA...GGCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATTTTGCTGTGTGAGCTaGGGTGTGGGGTTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: CCKLGSRRGILGALMGIRFCCVS*GVGFAA
Trigger: TGCAGCAAACCCCACACCCCAGCTCACACAGCAAAA...TCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp CGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTGGTAAAATAAATAGGTaGTTACTGGGGAGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: RGSNGYQICHLASAGPGSGKINR*LLGRLQ
Trigger: TTGGAGCCTCCCCAGTAACCACCTATTTATTTTACC...AGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
3UTR CAA 72 bp TTACTCTCAGGTGGGCTTAGACAGGACTGTAGCAGGTaGATAGCTTTAGGGGTGAGGAGGGGTGAGATCACT +
Preference number: 4 (lower is better)
Translates to: LLSGGLRQDCSR*IALGVRRGEIT
Trigger: AGTGATCTCACCCCTCCTCACCCCTAAAGCTATCAACCTGCTACAGTCCTGTCTAAGCCCACCTGAGAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR TCA 90 bp CAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGGTTTGGGAAAGAGGTAAAAGGGTGGGCTCTGAGGTaGGGTTCTGGGAGTACTCCT +
Preference number: 4 (lower is better)
Translates to: QILDKPRHKCSRFGKEVKGWALR*GSGSTP
Trigger: AGGAGTACTCCCAGAACCTCACCTCAGAGCCCACCC...TTTTACCTCTTTCCCAAACCTGGAGCATTTATGCCTAGGCTTGTCAAGAATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp AGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGTCTCCAGCTTTCCCATaGACAGCTCAATGTCCCTTA +
Preference number: 4 (lower is better)
Translates to: RGILGALMGIRSAILHQRSPAFP*TAQCPL
Trigger: TAAGGGACATTGAGCTGTTCATGGGAAAGCTGGAGA...CCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp CAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGGTTTGGGAAAGAGGTAAAAGGTCTTCAGTCGCTCTaGCCCCACTTCCTGGCACTG +
Preference number: 4 (lower is better)
Translates to: QILDKPRHKCSRFGKEVKGLQSL*PHFLAL
Trigger: CAGTGCCAGGAAGTGGGGGCAGAGCGACTGAAGACC...TTTTACCTCTTTCCCAAACCTGGAGCATTTATGCCTAGGCTTGTCAAGAATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TGTGGGGTTTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGAGGAGGTTGAAGCTGTaGTTGATCTTCTGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: CGVCCKLGSRRGILGALMRRLKL*LIFWKQ
Trigger: CTGCTTCCAGAAGATCAAGCACAGCTTCAACCTCCT...CATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGGGTGTGGGGTTTGCTaGAAACTGGGATCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: CKLGSRRGILGALMGIRSGCGVC*KLGSRR
Trigger: TCTTCTGGATCCCAGTTTGCAGCAAACCCCACACCC...AGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp CTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTAAGCCTAGGCATAAATaGTCCAGGTTTGGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: LMGIRSAILHQRGLVLGGKPRHK*SRFGKE
Trigger: CTCTTTCCCAAACCTGGAGCATTTATGCCTAGGCTT...ACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp AATTCTCGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTAAGCCTAGGCATAAATaGTCCAGGTTTGGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: NSRGSNGYQICHLASAGPKPRHK*SRFGKE
Trigger: CTCTTTCCCAAACCTGGAGCATTTATGCCTAGGCTT...AGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCGAGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp AGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGGTTTTCAATGTACTGTGCCTaGGTGAGACCTCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: RRGTEQILDKPRHKCSRFSMYCA*VRPPWS
Trigger: GGACCAGGGAGGTCTCACCCAGGCACAGTACATTGA...AAACCTGGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp AGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGGTTTCTCCAGGATGTTGCTTaGAATGTAGCCGCTCCGTCC +
Preference number: 4 (lower is better)
Translates to: RRGTEQILDKPRHKCSRFLQDVA*NVAAPS
Trigger: GGACGGAGCGGCTACATTCCAAGCAACATCCTGGAG...AAACCTGGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp CAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGGTTTGGGAAAGAGGTAAAAGCGGGGCCTGGTTCTTaGAGGTGTCTAAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: QILDKPRHKCSRFGKEVKAGPGS*RCLSWC
Trigger: GCACCAGCTTAGACACCTCCAAGAACCAGGCCCCGC...TTTTACCTCTTTCCCAAACCTGGAGCATTTATGCCTAGGCTTGTCAAGAATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TGTGGGGTTTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGTTTGCTTCAGCCTCTaGGCCTGTCCATTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: CGVCCKLGSRRGILGALMVCFSL*ACPLFL
Trigger: CAAAAACAATGGACAGGCCCAGAGGCTGAAGCAAAC...CATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp TTGAAGATGCTTTTATTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTCAGGAGGGTGGGCTCTaGGGTGAGGTTCTGGGAGTA +
Preference number: 4 (lower is better)
Translates to: LKMLLLRRRGTEQILDKPQEGGL*GEVLGV
Trigger: TACTCCCAGAACCTCACCTCAGAGCCCACCCTCCTG...AGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAATAAAAGCATCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp TGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTAAGTTGCCAGTCATCTaGGAATGTGGGTTGGTAGGG +
Preference number: 4 (lower is better)
Translates to: CKLGSRRGILGALMGIRSKLPVI*ECGLVG
Trigger: CCCTACCAACCCACATTCTCAGATGACTGGCAACTT...AGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp ACAAGCTTGAAGATGCTTTTATTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGTGCTCCACCCTGTaGTGCAGGAGGGTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: TSLKMLLLRRRGTEQILDKCSTL*CRRVGS
Trigger: AGAGCCCACCCTCCTGCAGCACAGGGTGGAGCACTT...GTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAATAAAAGCATCTTCAAGCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361852.8
ENST00000361965.9
CDS-3UTR GCA 90 bp ATAAATAGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGAGGAGGTTGAAGCTGTaGTTGATCTTCTGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: INRWLLGRLQHSQKGHCLRRLKL*LIFWKQ
Trigger: CTGCTTCCAGAAGATCAAGCACAGCTTCAACCTCCT...CAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCTATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGAGGGCTCTGGAAGTTaGCAGTCATCTGAGAATGTG +
Preference number: 4 (lower is better)
Translates to: CKLGSRRGILGALMGIRSEGSGS*QSSENV
Trigger: CACATTCTCAGATGACTGGCAACTTCCAGAGCCCTC...AGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGAACTCGTACAAGACTTaGATTTTCAGGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLQTGIQKRNSRGSNGYQNSYKT*IFRAGW
Trigger: CCAGCCAGCCCTGAAAATGCAAGTCTTGTACGAGTT...CTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp ACAAGCTTGAAGATGCTTTTATTGAGAAGGAGAGGGACTGAACAGATTCTTGACGCTCCCCAGGTCTTATaGGAAGTAGCTGGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: TSLKMLLLRRRGTEQILDAPQVL*EVAGSP
Trigger: CGGGGAGCCAGCTACTTCGCATAAGACCTGGGGAGC...GTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAATAAAAGCATCTTCAAGCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361852.8
ENST00000361965.9
CDS-3UTR GCA 90 bp AGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGGTTTAGGTGTCTAAGCTGGTaGCTAAGGGCTTATCCCCAG +
Preference number: 4 (lower is better)
Translates to: RRGTEQILDKPRHKCSRFRCLSW*LRAYPQ
Trigger: CTGGGGATAAGCCCTTAGGCACCAGCTTAGACACCT...AAACCTGGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTCCTGTCCATTGTTTTTaGTGTGTGAGCTGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: CKLGSRRGILGALMGIRSPVHCF*CVSWGV
Trigger: CACACCCCAGCTCACACAGCAAAAACAATGGACAGG...AGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGAAGGGACACTGTTTaGTTCAGCCTCTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LRRRGTEQILDKPRHKCSRRDTV*FSLWAC
Trigger: ACAGGCCCAGAGGCTGAAGCAAACAGTGTCCCTTCT...GGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp GCATGCAATAATACGGTCCGAATCAAACCAAGACTATCTCCTCTGCTTGCCACTAGTCGAGGTCTGCTTTaGTCCAGCTCTTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: ACNNTVRIKPRLSPLLATSRGLL*SSSSSR
Trigger: TCTGGAGGAAGAGCTGGAGCAAAGCAGACCTCGACT...AGTGGCAAGCAGAGGAGATAGTCTTGGTTTGATTCGGACCGTATTATTGCATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR GCA 90 bp GAAAGAGGTAAAATAAATAGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGCTCCAAGTCGAGGTCTaGTTTGCTCCAGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ERGKINRWLLGRLQHSQKLQVEV*FAPALP
Trigger: AGGAAGAGCTGGAGCAAAGCAGACCTCGACTTGGAG...CTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCTATTTATTTTACCTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369805.7
CDS-3UTR GCA 90 bp CACAGTCAGTTCCCGTGGGTTCCTAGCTTCAAACTCGTACAAGACTTGCATTTTTTGCATGTCATCAAGTaGTGCAGGGAGAGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: HSQFPWVPSFKLVQDLHFLHVIK*CRERGS
Trigger: ACTCCCCCTCTCCCTGCAGCACTTGATGACATGCAA...AAAATGCAAGTCTTGTACGAGTTTGAAGCTAGGAACCCACGGGAACTGACTGTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp TTGAAGATGCTTTTATTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTTCTCCTTCAGCCAGGTaGCCAGCCTTCCCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: LKMLLLRRRGTEQILDKPSPSAR*PAFPGG
Trigger: ACCTCCTGGGAAGGCTGGCCACCTGGCTGAAGGAGA...AGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAATAAAAGCATCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TTGAAGATGCTTTTATTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTGCTAGTGGTCCAGGCTaGGCCCAACCCCATCCAAAG +
Preference number: 4 (lower is better)
Translates to: LKMLLLRRRGTEQILDKPASGPG*AQPHPK
Trigger: CTTTGGATGGGGTTGGGCCCAGCCTGGACCACTAGC...AGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAATAAAAGCATCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GAAAGAGGTAAAATAAATAGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGAGTCATCTGAGAATGTaGGTTGGTAGGGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: ERGKINRWLLGRLQHSQKSHLRM*VGRAGA
Trigger: AGCCCCTGCCCTACCAACCCACATTCTCAGATGACT...CTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCTATTTATTTTACCTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp CACAGTCAGTTCCCGTGGGTTCCTAGCTTCAAACTCGTACAAGACTTGCATTTTAGTCATCTGAGAATGTaGGTTGGTAGGGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: HSQFPWVPSFKLVQDLHFSHLRM*VGRAGA
Trigger: AGCCCCTGCCCTACCAACCCACATTCTCAGATGACT...AAAATGCAAGTCTTGTACGAGTTTGAAGCTAGGAACCCACGGGAACTGACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp CAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGGTTTGGGAAAGAGGTAAAACACCACCGCTTGCTGTaGTCCAGAACCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QILDKPRHKCSRFGKEVKHHRLL*SRTSSF
Trigger: GAAGCTGGAGGTTCTGGACCACAGCAAGCGGTGGTG...TTTTACCTCTTTCCCAAACCTGGAGCATTTATGCCTAGGCTTGTCAAGAATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGGGGTTTGCTGCAAACTaGGATCCAGAAGAGGAATTC +
Preference number: 4 (lower is better)
Translates to: LLQTGIQKRNSRGSNGYQGFAAN*DPEEEF
Trigger: GAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCC...CTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GAAAGAGGTAAAATAAATAGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGTTTTGCTGTGTGAGCTaGGGTGTGGGGTTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: ERGKINRWLLGRLQHSQKFCCVS*GVGFAA
Trigger: TGCAGCAAACCCCACACCCCAGCTCACACAGCAAAA...CTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCTATTTATTTTACCTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGAGTTTGCTTCAGCCTCTaGGCCTGTCCATTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: CCKLGSRRGILGALMGIRVCFSL*ACPLFL
Trigger: CAAAAACAATGGACAGGCCCAGAGGCTGAAGCAAAC...TCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TTGAAGATGCTTTTATTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTCCACACCCGGCCCTGTaGATCCATCTCGAACAGCTT +
Preference number: 4 (lower is better)
Translates to: LKMLLLRRRGTEQILDKPPHPAL*IHLEQL
Trigger: AAGCTGTTCGAGATGGATGCACAGGGCCGGGTGTGG...AGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAATAAAAGCATCTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCCATTCATGGCCTGGATaGTGTCTAGGCGGTAAGAGT +
Preference number: 4 (lower is better)
Translates to: LRRRGTEQILDKPRHKCSHSWPG*CLGGKS
Trigger: ACTCTTACCGCCTAGACAGCATCCAGGCCATGAATG...GGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp CAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGGTTTGGGAAAGAGGTAAAAGCAGTCAATGTACTGTaGCTGGGTGAGACCTCCCTG +
Preference number: 4 (lower is better)
Translates to: QILDKPRHKCSRFGKEVKAVNVL*LGETSL
Trigger: CAGGGAGGTCTCACCCAGGCACAGTACATTGACTGC...TTTTACCTCTTTCCCAAACCTGGAGCATTTATGCCTAGGCTTGTCAAGAATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp CAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGGTTTGGGAAAGAGGTAAAACCCACTTCCTGGCACTaGAAGAGCAGAGTGCTAGTG +
Preference number: 4 (lower is better)
Translates to: QILDKPRHKCSRFGKEVKPTSWH*KSRVLV
Trigger: CACTAGCACTCTGCTCTTCCAGTGCCAGGAAGTGGG...TTTTACCTCTTTCCCAAACCTGGAGCATTTATGCCTAGGCTTGTCAAGAATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR TCA 90 bp GAAAGAGGTAAAATAAATAGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGTCTCCAGCTTTCCCATaGACAGCTCAATGTCCCTTA +
Preference number: 4 (lower is better)
Translates to: ERGKINRWLLGRLQHSQKSPAFP*TAQCPL
Trigger: TAAGGGACATTGAGCTGTTCATGGGAAAGCTGGAGA...CTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCTATTTATTTTACCTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCGAGGAAAGTGTGAGGTaGTCCCTAACCTATGACTTC +
Preference number: 4 (lower is better)
Translates to: LRRRGTEQILDKPRHKCSEESVR*SLTYDF
Trigger: GAAGTCATAGGTTAGGGAGCACCTCACACTTTCCTC...GGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TTGAAGATGCTTTTATTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTCCCACTTCCTGGCACTaGAAGAGCAGAGTGCTAGTG +
Preference number: 4 (lower is better)
Translates to: LKMLLLRRRGTEQILDKPPTSWH*KSRVLV
Trigger: CACTAGCACTCTGCTCTTCCAGTGCCAGGAAGTGGG...AGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAATAAAAGCATCTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp AGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGGTTTATTTCTTCTTCCTGCTaGTCTTTGCCTGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: RRGTEQILDKPRHKCSRFISSSC*SLPGPS
Trigger: AGAAGGCCCAGGCAAAGACCAGCAGGAAGAAGAAAT...AAACCTGGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGCTGTGCTTGATCTTCTaGAAGCAGTCAATGTACTGT +
Preference number: 4 (lower is better)
Translates to: LLQTGIQKRNSRGSNGYQLCLIF*KQSMYC
Trigger: ACAGTACATTGACTGCTTCCAGAAGATCAAGCACAG...CTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp CAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGGTTTGGGAAAGAGGTAAAAAGGGAAACAGGGTCCTaGTATCCTAAGGGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: QILDKPRHKCSRFGKEVKRETGS*YPKGAW
Trigger: CCAAGCACCCTTAGGATACCAGGACCCTGTTTCCCT...TTTTACCTCTTTCCCAAACCTGGAGCATTTATGCCTAGGCTTGTCAAGAATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp ACAAGCTTGAAGATGCTTTTATTGAGAAGGAGAGGGACTGAACAGATTCTTGACTCCTCACCGTGGCAGTaGAGAAGTTCTCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: TSLKMLLLRRRGTEQILDSSPWQ*RSSLPA
Trigger: TGCAGGCAGAGAACTTCTCCACTGCCACGGTGAGGA...GTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAATAAAAGCATCTTCAAGCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361852.8
ENST00000361965.9
CDS-3UTR CCA 90 bp TTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGGGTAAAATAAATAGGTaGTTACTGGGGAGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: LLQTGIQKRNSRGSNGYQGKINR*LLGRLQ
Trigger: TTGGAGCCTCCCCAGTAACCACCTATTTATTTTACC...CTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TTGAAGATGCTTTTATTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTCCAAGTCGAGGTCTTTaGTCCAGCTCTTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LKMLLLRRRGTEQILDKPPSRGL*SSSSSR
Trigger: TCTGGAGGAAGAGCTGGAGCAAAGACCTCGACTTGG...AGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAATAAAAGCATCTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361852.8
ENST00000361965.9
CDS-3UTR GCA 90 bp CAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGGTTTGGGAAAGAGGTAAAAGAGGGCTCTGGAAGTTaGCAGTCATCTGAGAATGTG +
Preference number: 4 (lower is better)
Translates to: QILDKPRHKCSRFGKEVKEGSGS*QSSENV
Trigger: CACATTCTCAGATGACTGGCAACTTCCAGAGCCCTC...TTTTACCTCTTTCCCAAACCTGGAGCATTTATGCCTAGGCTTGTCAAGAATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TTGAAGATGCTTTTATTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGTGTCTAAGCTGGTaGCTAAGGGCTTATCCCCAG +
Preference number: 4 (lower is better)
Translates to: LKMLLLRRRGTEQILDKPRCLSW*LRAYPQ
Trigger: CTGGGGATAAGCCCTTAGGCACCAGCTTAGACACCT...AGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAATAAAAGCATCTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCAAGCCTAGGCATAAATaGTCCAGGTTTGGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: LRRRGTEQILDKPRHKCSKPRHK*SRFGKE
Trigger: CTCTTTCCCAAACCTGGAGCATTTATGCCTAGGCTT...GGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp TTGAAGATGCTTTTATTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGTCATCTGAGAATGTaGGTTGGTAGGGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LKMLLLRRRGTEQILDKPSHLRM*VGRAGA
Trigger: AGCCCCTGCCCTACCAACCCACATTCTCAGATGACT...AGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAATAAAAGCATCTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp ACAAGCTTGAAGATGCTTTTATTGAGAAGGAGAGGGACTGAACAGATTCTTGACTATCCTAAGGGTGCTTaGCTGGAGGGCTCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: TSLKMLLLRRRGTEQILDYPKGA*LEGSGS
Trigger: ACTTCCAGAGCCCTCCAGCCAAGCACCCTTAGGATA...GTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAATAAAAGCATCTTCAAGCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361852.8
ENST00000361965.9
CDS-3UTR TCA 90 bp TTGAAGATGCTTTTATTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTAAGTTGCCAGTCATCTaGGAATGTGGGTTGGTAGGG +
Preference number: 4 (lower is better)
Translates to: LKMLLLRRRGTEQILDKPKLPVI*ECGLVG
Trigger: CCCTACCAACCCACATTCTCAGATGACTGGCAACTT...AGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAATAAAAGCATCTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp CAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGGTTTGGGAAAGAGGTAAAAATTTCTTCTTCCTGCTaGTCTTTGCCTGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: QILDKPRHKCSRFGKEVKISSSC*SLPGPS
Trigger: AGAAGGCCCAGGCAAAGACCAGCAGGAAGAAGAAAT...TTTTACCTCTTTCCCAAACCTGGAGCATTTATGCCTAGGCTTGTCAAGAATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GAAAGAGGTAAAATAAATAGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGCTGTGCTTGATCTTCTaGAAGCAGTCAATGTACTGT +
Preference number: 4 (lower is better)
Translates to: ERGKINRWLLGRLQHSQKLCLIF*KQSMYC
Trigger: ACAGTACATTGACTGCTTCCAGAAGATCAAGCACAG...CTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCTATTTATTTTACCTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CCA 90 bp GCATGCAATAATACGGTCCGAATCAAACCAAGACTATCTCCTCTGCTTGCCACTCTGTGCTTGATCTTCTaGAAGCAGTCAATGTACTGT +
Preference number: 4 (lower is better)
Translates to: ACNNTVRIKPRLSPLLATLCLIF*KQSMYC
Trigger: ACAGTACATTGACTGCTTCCAGAAGATCAAGCACAG...AGTGGCAAGCAGAGGAGATAGTCTTGGTTTGATTCGGACCGTATTATTGCATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CCA 90 bp TTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCGGTAAAATAAATAGGTaGTTACTGGGGAGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: LRRRGTEQILDKPRHKCSGKINR*LLGRLQ
Trigger: TTGGAGCCTCCCCAGTAACCACCTATTTATTTTACC...GGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR GCA 90 bp TTGAAGATGCTTTTATTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTAACTCGTACAAGACTTaGATTTTCAGGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LKMLLLRRRGTEQILDKPNSYKT*IFRAGW
Trigger: CCAGCCAGCCCTGAAAATGCAAGTCTTGTACGAGTT...AGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAATAAAAGCATCTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS GCA 90 bp GGCAGGGCGGTGGGCACATGGGAACACTTGGGTTTAGTTGGACACTaGCCGGGGGCTGCAGAGGTACTCACCTCCACCCTGTGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GRAVGTWEHLGLVGH*PGAAEVLTSTLCCR
Trigger: CCTGCAGCACAGGGTGGAGGTGAGTACCTCTGCAGCCCCCGGGCAGTGTCCAACTAAACCCAAGTGTTCCCATGTGCCCACCGCCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477568.1
CDS CCA 90 bp CCGCTCCGTCCCGCCTCATTCTTCACCAGCCACCACCGCTTGCTGTaGTCCAGAACCTGCCAAGAGTCACCACCTCAGTCCCCTGAGCCT +
Preference number: 5 (lower is better)
Translates to: PLRPASFFTSHHRLL*SRTCQESPPQSPEP
Trigger: AGGCTCAGGGGACTGAGGTGGTGACTCTTGGCAGGTTCTGGACCACAGCAAGCGGTGGTGGCTGGTGAAGAATGAGGCGGGACGGAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489465.1
CDS TCA 90 bp GACACTCACCCGCTCAACCTCCAGCCAGGCCTGCTCTGTTCAATCTaGCCACCCCTCCCCGTCCCTGACACTGAGCAGATGCTCTGGCAG +
Preference number: 5 (lower is better)
Translates to: DTHPLNLQPGLLCSI*PPLPVPDTEQMLWQ
Trigger: CTGCCAGAGCATCTGCTCAGTGTCAGGGACGGGGAGGGGTGGTCAGATTGAACAGAGCAGGCCTGGCTGGAGGTTGAGCGGGTGAGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477568.1
CDS GCA 90 bp TGTAGCCGCTCCGTCCCGCCTCATTCTTCACCAGCCACCACCGCTTaGTGTGGTCCAGAACCTGCCAAGAGTCACCACCTCAGTCCCCTG +
Preference number: 5 (lower is better)
Translates to: CSRSVPPHSSPATTA*CGPEPAKSHHLSPL
Trigger: CAGGGGACTGAGGTGGTGACTCTTGGCAGGTTCTGGACCACAGCAAGCGGTGGTGGCTGGTGAAGAATGAGGCGGGACGGAGCGGCTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489465.1
CDS-3UTR CAA 90 bp GATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTGTCTAAGCTGGTGCCCAGGAGGCTGGTCTaGGAGCAGGTGGTCCGGTGC +
Preference number: 5 (lower is better)
Translates to: DLPSCISGAWFLEVSKLVPRRLV*EQVVRC
Trigger: GCACCGGACCACCTGCTCCAAGACCAGCCTCCTGGG...CACCAGCTTAGACACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS TCA 90 bp TGGACCACAGGCGTGCTCCACCCTGTGCTGCAGGAGGGTGGGCTCTaGGGTGAGGTTCTGGGAGTACTCCTTCCGGTGCAAGTAAATGGC +
Preference number: 5 (lower is better)
Translates to: WTTGVLHPVLQEGGL*GEVLGVLLPVQVNG
Trigger: GCCATTTACTTGCACCGGAAGGAGTACTCCCAGAACCTCACCTCAGAGCCCACCCTCCTGCAGCACAGGGTGGAGCACGCCTGTGGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS CCA 90 bp ATGTTCTGGCAGGGCGGTGGGCACATGGGAACACTTGGGTTTAGTTaGACACTGCCCGGGGGCTGCAGAGGTACTCACCTCCACCCTGTG +
Preference number: 5 (lower is better)
Translates to: MFWQGGGHMGTLGFS*TLPGGCRGTHLHPV
Trigger: CACAGGGTGGAGGTGAGTACCTCTGCAGCCCCCGGGCAGTGTCCAACTAAACCCAAGTGTTCCCATGTGCCCACCGCCCTGCCAGAACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477568.1
CDS TCA 90 bp CCCGTCCCTGACACTGAGCAGATGCTCTGGCAGGCTTGTTGGATCTaGGTCCATGCGACATGGTTGGGACAGGCTGTTGGCTTCTGGGGC +
Preference number: 5 (lower is better)
Translates to: PVPDTEQMLWQACWI*VHATWLGQAVGFWG
Trigger: GCCCCAGAAGCCAACAGCCTGTCCCAACCATGTCGCATGGACTCAGATCCAACAAGCCTGCCAGAGCATCTGCTCAGTGTCAGGGACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477568.1
CDS GCA 90 bp GCCTCATTCTTCACCAGCCACCACCGCTTGCTGTGGTCCAGAACCTaGCAAGAGTCACCACCTCAGTCCCCTGAGCCTCTTTCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: ASFFTSHHRLLWSRT*QESPPQSPEPLSSQ
Trigger: CTGGCTGGAAAGAGGCTCAGGGGACTGAGGTGGTGACTCTTGGCAGGTTCTGGACCACAGCAAGCGGTGGTGGCTGGTGAAGAATGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489465.1
CDS-3UTR CAA 90 bp TGGTTCAGCACTTCCTCGTCCCTCTCTGGGTCCTCGGGGGAAGAGGACCGCCTTAAGTCGAGGTCTGCTTaGCTCCAGCTCTTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: WFSTSSSLSGSSGEEDRLKSRSA*LQLFLQ
Trigger: CTGGAGGAAGAGCTGGAGCAAAGCAGACCTCGACTT...AAGGCGGTCCTCTTCCCCCGAGGACCCAGAGAGGGACGAGGAAGTGCTGAACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS TCA 90 bp ATCTCGAACAGCTTCTGCAAGGCATCCTCGGGCCCCTGGACTCTCTaGCTCCCCTGCTTGCATGTCATCAAGTGCTCCACCCTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: ISNSFCKASSGPWTL*LPCLHVIKCSTLCC
Trigger: GCAGCACAGGGTGGAGCACTTGATGACATGCAAGCAGGGGAGTCAGAGAGTCCAGGGGCCCGAGGATGCCTTGCAGAAGCTGTTCGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS GCA 90 bp AGGGACCCAAGTGTCCTCACCGTGGCAGTGGAGAAGTTCTCTGCCTaGAGCCAGTCTGTGACCTCTTCAGGCCTCGAGCTAAGTCGAAGC +
Preference number: 5 (lower is better)
Translates to: RDPSVLTVAVEKFSA*SQSVTSSGLELSRS
Trigger: GCTTCGACTTAGCTCGAGGCCTGAAGAGGTCACAGACTGGCTGCAGGCAGAGAACTTCTCCACTGCCACGGTGAGGACACTTGGGTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
ENST00000498743.1
CDS GCA 90 bp AGGCAGAGCCTGCCTTTGATGAGGTTACAGAGGCAGCCACGCCTGTaGTCTTTGGACTCTGGTGGGTGGGGAGGCTTCCTGGTCACTAAC +
Preference number: 5 (lower is better)
Translates to: RQSLPLMRLQRQPRL*SLDSGGWGGFLVTN
Trigger: GTTAGTGACCAGGAAGCCTCCCCACCCACCAGAGTCCAAAGAGCACAGGCGTGGCTGCCTCTGTAACCTCATCAAAGGCAGGCTCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369805.7
CDS CCA 90 bp TGTGGACATAGCATCTGTAGCTCCCCAGGTCTTATGCGAAGTAGCTaGCTCCCCGTCAGGGACCCAAGTGTCCTCACCGTGGCAGTGGAG +
Preference number: 5 (lower is better)
Translates to: CGHSICSSPGLMRSS*LPVRDPSVLTVAVE
Trigger: CTCCACTGCCACGGTGAGGACACTTGGGTCCCTGACGGGGAGCCAGCTACTTCGCATAAGACCTGGGGAGCTACAGATGCTATGTCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
ENST00000498743.1
CDS-3UTR CAA 90 bp AGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCTGCAGGATCAAGTCTaGGCTCCACACCCGGCCCTG +
Preference number: 5 (lower is better)
Translates to: RWLLGRLQHSQKGHCLLQLQDQV*APHPAL
Trigger: CAGGGCCGGGTGTGGAGCCAAGACTTGATCCTGCAG...CTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp CCTAAGGGTGCTTGGCTGGAGGGCTCTGGAAGTTGCCAGTCATCTGAGAATGTGCTGCAGGATCAAGTCTaGGCTCCACACCCGGCCCTG +
Preference number: 5 (lower is better)
Translates to: PKGAWLEGSGSCQSSENVLQDQV*APHPAL
Trigger: CAGGGCCGGGTGTGGAGCCAAGACTTGATCCTGCAG...CACATTCTCAGATGACTGGCAACTTCCAGAGCCCTCCAGCCAAGCACCCTTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CAA 90 bp GCTCTGGAAGTTGCCAGTCATCTGAGAATGTGGGTTGGTAGGGCAGGGGCTCATCGAGCTCAGGGGCACTaGTCTCCTTCAGCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: ALEVASHLRMWVGRAGAHRAQGH*SPSARW
Trigger: CCACCTGGCTGAAGGAGACAAGTGCCCCTGAGCTCG...ATGAGCCCCTGCCCTACCAACCCACATTCTCAGATGACTGGCAACTTCCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CAA 90 bp GTTGCCAGTCATCTGAGAATGTGGGTTGGTAGGGCAGGGGCTCATCGCCTGTCCGCTCCAGGATGTTGCTaGGAATGTAGCCGCTCCGTC +
Preference number: 5 (lower is better)
Translates to: VASHLRMWVGRAGAHRLSAPGCC*ECSRSV
Trigger: GACGGAGCGGCTACATTCCAAGCAACATCCTGGAGC...GGACAGGCGATGAGCCCCTGCCCTACCAACCCACATTCTCAGATGACTGGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CAA 90 bp CGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTAGCGGGGCCTGGTTCTaGGAGGTGTCTAAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: RGSNGYQICHLASAGPGSSGAWF*EVSKLV
Trigger: CACCAGCTTAGACACCTCCAAGAACCAGGCCCCGCT...AGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp TGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGACCCAGGAGGCTGGTCTaGGAGCAGGTGGTCCGGTGC +
Preference number: 5 (lower is better)
Translates to: CCKLGSRRGILGALMGIRPRRLV*EQVVRC
Trigger: GCACCGGACCACCTGCTCCAAGACCAGCCTCCTGGG...TCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp CAGGATGTTGCTTGGAATGTAGCCGCTCCGTCCCGCCTCATTCTTCACCAGCCAGAGTCCAGCTCCTCCTaGGTCTCAATGTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: QDVAWNVAAPSRLILHQPESSSS*VSMSSS
Trigger: GCTGCTGGACATTGAGACCAAGGAGGAGCTGGACTC...TGGCTGGTGAAGAATGAGGCGGGACGGAGCGGCTACATTCCAAGCAACATCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CAA 90 bp TACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTGGGCTCCAGGATGTTGCTaGGAATGTAGCCGCTCCGTC +
Preference number: 5 (lower is better)
Translates to: YWGGSNTARRDTVCFSLWAPGCC*ECSRSV
Trigger: GACGGAGCGGCTACATTCCAAGCAACATCCTGGAGC...CCAGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp GGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGCTGGGGTGTGGGGTTaGCTGCAAACTGGGATCCAG +
Preference number: 5 (lower is better)
Translates to: GALMGIRSAILHQRGLVLAGVWG*LQTGIQ
Trigger: CTGGATCCCAGTTTGCAGCAAACCCCACACCCCAGC...AAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS GCA 90 bp TCTGTTCAATCTGACCACCCCTCCCCGTCCCTGACACTGAGCAGATaGTCTGGCAGGCTTGTTGGATCTGAGTCCATGCGACATGGTTGG +
Preference number: 5 (lower is better)
Translates to: SVQSDHPSPSLTLSR*SGRLVGSESMRHGW
Trigger: CCAACCATGTCGCATGGACTCAGATCCAACAAGCCTGCCAGAGCATCTGCTCAGTGTCAGGGACGGGGAGGGGTGGTCAGATTGAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477568.1
CDS-3UTR CAA 90 bp AATACGGTCCGAATCAAACCAAGACTATCTCCTCTGCTTGCCACTGAATCCTCCCCCAGGAGGCTGGTCTaGGAGCAGGTGGTCCGGTGC +
Preference number: 5 (lower is better)
Translates to: NTVRIKPRLSPLLATESSPRRLV*EQVVRC
Trigger: GCACCGGACCACCTGCTCCAAGACCAGCCTCCTGGG...GGAGGATTCAGTGGCAAGCAGAGGAGATAGTCTTGGTTTGATTCGGACCGTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CAA 90 bp GGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGAGTCCAGCTCCTCCTaGGTCTCAATGTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GALMGIRSAILHQRGLVLESSSS*VSMSSS
Trigger: GCTGCTGGACATTGAGACCAAGGAGGAGCTGGACTC...AAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp AGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGGAGTCCAGCTCCTCCTaGGTCTCAATGTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: RWLLGRLQHSQKGHCLLQESSSS*VSMSSS
Trigger: GCTGCTGGACATTGAGACCAAGGAGGAGCTGGACTC...CTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp TGTAAGGGGACCATGGACTGTGCTCTAGGGTCCTCTGGTGGGGCTGTTCTGGAGCAGGACTGTAGCAGGTaGATAGCTTTAGGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: CKGTMDCALGSSGGAVLEQDCSR*IALGVR
Trigger: CCTCACCCCTAAAGCTATCAACCTGCTACAGTCCTG...CTCCAGAACAGCCCCACCAGAGGACCCTAGAGCACAGTCCATGGTCCCCTTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CAA 90 bp TGGTTCAGCACTTCCTCGTCCCTCTCTGGGTCCTCGGGGGAAGAGGACCGCCTTAAACTCGTACAAGACTaGCATTTTCAGGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: WFSTSSSLSGSSGEEDRLKLVQD*HFQGWL
Trigger: CAGCCAGCCCTGAAAATGCAAGTCTTGTACGAGTTT...AAGGCGGTCCTCTTCCCCCGAGGACCCAGAGAGGGACGAGGAAGTGCTGAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CAA 90 bp AGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGACCAGCCACCACCGCTaGCTGTGGTCCAGAACCTCC +
Preference number: 5 (lower is better)
Translates to: RGILGALMGIRSAILHQRTSHHR*LWSRTS
Trigger: GGAGGTTCTGGACCACAGCAAGCGGTGGTGGCTGGT...CCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp AGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGGCTCCAGGATGTTGCTaGGAATGTAGCCGCTCCGTC +
Preference number: 5 (lower is better)
Translates to: RWLLGRLQHSQKGHCLLQAPGCC*ECSRSV
Trigger: GACGGAGCGGCTACATTCCAAGCAACATCCTGGAGC...CTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp GGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTCAGAAGGGACACTGTTaGCTTCAGCCTCTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: GALMGIRSAILHQRGLVLQKGHC*LQPLGL
Trigger: CAGGCCCAGAGGCTGAAGCAAACAGTGTCCCTTCTG...AAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp CAGGATGTTGCTTGGAATGTAGCCGCTCCGTCCCGCCTCATTCTTCACCAGCCAGACTATCTCCTCTGCTaGCCACTGAATCCTCCCCAC +
Preference number: 5 (lower is better)
Translates to: QDVAWNVAAPSRLILHQPDYLLC*PLNPPH
Trigger: GTGGGGAGGATTCAGTGGCAAGCAGAGGAGATAGTC...TGGCTGGTGAAGAATGAGGCGGGACGGAGCGGCTACATTCCAAGCAACATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS CCA 90 bp AGATGCTCTGGCAGGCTTGTTGGATCTGAGTCCATGCGACATGGTTaGGACAGGCTGTTGGCTTCTGGGGCAGGGACTTGTGTGAAGTGT +
Preference number: 5 (lower is better)
Translates to: RCSGRLVGSESMRHG*DRLLASGAGTCVKC
Trigger: ACACTTCACACAAGTCCCTGCCCCAGAAGCCAACAGCCTGTCCCAACCATGTCGCATGGACTCAGATCCAACAAGCCTGCCAGAGCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477568.1
CDS-3UTR CAA 90 bp CAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCGAGCTCAGGGGCACTaGTCTCCTTCAGCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: QTGIQKRNSRGSNGYQICRAQGH*SPSARW
Trigger: CCACCTGGCTGAAGGAGACAAGTGCCCCTGAGCTCG...GCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp GAGCTGGGGTGTGGGGTTTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGCAGGACTGTAGCAGGTaGATAGCTTTAGGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: ELGCGVCCKLGSRRGILGQDCSR*IALGVR
Trigger: CCTCACCCCTAAAGCTATCAACCTGCTACAGTCCTG...CCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCCCACACCCCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp CAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCACCAGCCACCACCGCTaGCTGTGGTCCAGAACCTCC +
Preference number: 5 (lower is better)
Translates to: QTGIQKRNSRGSNGYQICTSHHR*LWSRTS
Trigger: GGAGGTTCTGGACCACAGCAAGCGGTGGTGGCTGGT...GCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS CCA 90 bp AATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTaGAGGTGTCTAAGCTGGTGCCTAAGGGCTTATCCCCAGCATCCT +
Preference number: 5 (lower is better)
Translates to: NGYQICHLASAGPGS*RCLSWCLRAYPQHP
Trigger: AGGATGCTGGGGATAAGCCCTTAGGCACCAGCTTAGACACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp TTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGCTGGGCCTTGACATGTaGACGCTGCTGAGGACGGCT +
Preference number: 5 (lower is better)
Translates to: LLQTGIQKRNSRGSNGYQLGLDM*TLLRTA
Trigger: AGCCGTCCTCAGCAGCGTCAACATGTCAAGGCCCAG...CTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp TGCTGTGGTCCAGAACCTCCAGCTTCTCTCCCTGGACCACAGTCAGTTCCCGTGAGGTTGAAGCTGTGCTaGATCTTCTGGAAGCAGTCA +
Preference number: 5 (lower is better)
Translates to: CCGPEPPASLPGPQSVPVRLKLC*IFWKQS
Trigger: TGACTGCTTCCAGAAGATCAAGCACAGCTTCAACCT...CACGGGAACTGACTGTGGTCCAGGGAGAGAAGCTGGAGGTTCTGGACCACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CAA 90 bp TGCTGTGGTCCAGAACCTCCAGCTTCTCTCCCTGGACCACAGTCAGTTCCCGTGATGAAGTTCAGGGACTaGAAGAGGATGTGTACGAGC +
Preference number: 5 (lower is better)
Translates to: CCGPEPPASLPGPQSVPVMKFRD*KRMCTS
Trigger: GCTCGTACACATCCTCTTCAAGTCCCTGAACTTCAT...CACGGGAACTGACTGTGGTCCAGGGAGAGAAGCTGGAGGTTCTGGACCACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CAA 90 bp TGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGAAGCGGGGCCTGGTTCTaGGAGGTGTCTAAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: CCKLGSRRGILGALMGIRSGAWF*EVSKLV
Trigger: CACCAGCTTAGACACCTCCAAGAACCAGGCCCCGCT...TCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp CTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTATCAGATCTGCCATCTaGCATCAGCGGGGCCTGGTT +
Preference number: 5 (lower is better)
Translates to: LMGIRSAILHQRGLVLGGIRSAI*HQRGLV
Trigger: AACCAGGCCCCGCTGATGCAAGATGGCAGATCTGAT...ACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp AAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCGCTGGGGTGTGGGGTTaGCTGCAAACTGGGATCCAG +
Preference number: 5 (lower is better)
Translates to: KLGSRRGILGALMGIRSAAGVWG*LQTGIQ
Trigger: CTGGATCCCAGTTTGCAGCAAACCCCACACCCCAGC...GGCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS CCA 90 bp TGGGTCCCTTCTCCAGGTTCCCATCAAATCACTTCTCTTACTCTGTaGCTTTCTGGTCTGGCAGGGAGCTGGTCTTGTTCTCTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: WVPSPGSHQITSLTL*LSGLAGSWSCSLLW
Trigger: CCAGAGCAGAGAACAAGACCAGCTCCCTGCCAGACCAGAAAGCCACAGAGTAAGAGAAGTGATTTGATGGGAACCTGGAGAAGGGACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475725.1
ENST00000498743.1
CDS CCA 90 bp CAGCCAGTCTGTGACCTCTTCAGGCCTCGAGCTAAGTCGAAGCATTaGAACCTAGAATCAGGGGGAACCAGGGATCAGAGTCCATCTCAT +
Preference number: 5 (lower is better)
Translates to: QPVCDLFRPRAKSKH*NLESGGTRDQSPSH
Trigger: ATGAGATGGACTCTGATCCCTGGTTCCCCCTGATTCTAGGTTCCAATGCTTCGACTTAGCTCGAGGCCTGAAGAGGTCACAGACTGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498743.1
CDS-3UTR CAA 90 bp AGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGGTTTCTGCAGGATCAAGTCTaGGCTCCACACCCGGCCCTG +
Preference number: 5 (lower is better)
Translates to: RRGTEQILDKPRHKCSRFLQDQV*APHPAL
Trigger: CAGGGCCGGGTGTGGAGCCAAGACTTGATCCTGCAG...AAACCTGGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp AGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGTCCAAGTCGAGGTCTTaGCTCCAGCTCTTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: RGILGALMGIRSAILHQRSKSRS*LQLFLQ
Trigger: CTGGAGGAAGAGCTGGAGCAAAGACCTCGACTTGGA...CCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361852.8
ENST00000361965.9
CDS-3UTR CAA 90 bp GAGCTGGGGTGTGGGGTTTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGAGGTTGAAGCTGTGCTaGATCTTCTGGAAGCAGTCA +
Preference number: 5 (lower is better)
Translates to: ELGCGVCCKLGSRRGILGRLKLC*IFWKQS
Trigger: TGACTGCTTCCAGAAGATCAAGCACAGCTTCAACCT...CCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCCCACACCCCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp GAAAGAGGTAAAATAAATAGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGCGAGCTCAGGGGCACTaGTCTCCTTCAGCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: ERGKINRWLLGRLQHSQKRAQGH*SPSARW
Trigger: CCACCTGGCTGAAGGAGACAAGTGCCCCTGAGCTCG...CTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCTATTTATTTTACCTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp GATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTGTCTAAGCTGGTGATGAAGTTCAGGGACTaGAAGAGGATGTGTACGAGC +
Preference number: 5 (lower is better)
Translates to: DLPSCISGAWFLEVSKLVMKFRD*KRMCTS
Trigger: GCTCGTACACATCCTCTTCAAGTCCCTGAACTTCAT...CACCAGCTTAGACACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp GATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGAGGTGTCTAAGCTGGTGAAACTCGTACAAGACTaGCATTTTCAGGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: DLPSCISGAWFLEVSKLVKLVQD*HFQGWL
Trigger: CAGCCAGCCCTGAAAATGCAAGTCTTGTACGAGTTT...CACCAGCTTAGACACCTCCAAGAACCAGGCCCCGCTGATGCAAGATGGCAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp GCATGCAATAATACGGTCCGAATCAAACCAAGACTATCTCCTCTGCTTGCCACTACCAGCCACCACCGCTaGCTGTGGTCCAGAACCTCC +
Preference number: 5 (lower is better)
Translates to: ACNNTVRIKPRLSPLLATTSHHR*LWSRTS
Trigger: GGAGGTTCTGGACCACAGCAAGCGGTGGTGGCTGGT...AGTGGCAAGCAGAGGAGATAGTCTTGGTTTGATTCGGACCGTATTATTGCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS-3UTR CAA 90 bp TGTGGGGTTTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGATCAGATCTGCCATCTaGCATCAGCGGGGCCTGGTT +
Preference number: 5 (lower is better)
Translates to: CGVCCKLGSRRGILGALMIRSAI*HQRGLV
Trigger: AACCAGGCCCCGCTGATGCAAGATGGCAGATCTGAT...CATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp TTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCCTGGGCCTTGACATGTaGACGCTGCTGAGGACGGCT +
Preference number: 5 (lower is better)
Translates to: LRRRGTEQILDKPRHKCSLGLDM*TLLRTA
Trigger: AGCCGTCCTCAGCAGCGTCAACATGTCAAGGCCCAG...GGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp AGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGAGGTTGAAGCTGTGCTaGATCTTCTGGAAGCAGTCA +
Preference number: 5 (lower is better)
Translates to: RWLLGRLQHSQKGHCLLQRLKLC*IFWKQS
Trigger: TGACTGCTTCCAGAAGATCAAGCACAGCTTCAACCT...CTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp TGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCTCCAGGATGTTGCTaGGAATGTAGCCGCTCCGTC +
Preference number: 5 (lower is better)
Translates to: CKLGSRRGILGALMGIRSAPGCC*ECSRSV
Trigger: GACGGAGCGGCTACATTCCAAGCAACATCCTGGAGC...AGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp GAAAGAGGTAAAATAAATAGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGAGCGGGGCCTGGTTCTaGGAGGTGTCTAAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: ERGKINRWLLGRLQHSQKSGAWF*EVSKLV
Trigger: CACCAGCTTAGACACCTCCAAGAACCAGGCCCCGCT...CTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCTATTTATTTTACCTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp TTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCGCTGGGGTGTGGGGTTaGCTGCAAACTGGGATCCAG +
Preference number: 5 (lower is better)
Translates to: LRRRGTEQILDKPRHKCSAGVWG*LQTGIQ
Trigger: CTGGATCCCAGTTTGCAGCAAACCCCACACCCCAGC...GGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp TGTGGGGTTTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGCCTGTCCATTGTTTTaGCTGTGTGAGCTGGGGTGT +
Preference number: 5 (lower is better)
Translates to: CGVCCKLGSRRGILGALMACPLF*LCELGC
Trigger: ACACCCCAGCTCACACAGCAAAAACAATGGACAGGC...CATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAAACCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp AGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGCTCTGGGCCTGTCCATaGTTTTTGCTGTGTGAGCTG +
Preference number: 5 (lower is better)
Translates to: RGILGALMGIRSAILHQRLWACP*FLLCEL
Trigger: CAGCTCACACAGCAAAAACAATGGACAGGCCCAGAG...CCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp TGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGAAGGCAGAGCCTGCCTTaGATGAGGTTACAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: CCKLGSRRGILGALMGIRRQSLP*MRLQRQ
Trigger: CTGCCTCTGTAACCTCATCAAAGGCAGGCTCTGCCT...TCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369805.7
CDS-3UTR CAA 90 bp TTGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGAAGTCGAGGTCTGCTTaGCTCCAGCTCTTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: LLQTGIQKRNSRGSNGYQKSRSA*LQLFLQ
Trigger: CTGGAGGAAGAGCTGGAGCAAAGCAGACCTCGACTT...CTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369805.7
CDS CCA 90 bp CAGGTTCCCATCAAATCACTTCTCTTACTCTGTGGCTTTCTGGTCTaGCAGGGAGCTGGTCTTGTTCTCTGCTCTGGCCCCATGATAAAG +
Preference number: 5 (lower is better)
Translates to: QVPIKSLLLLCGFLV*QGAGLVLCSGPMIK
Trigger: CTTTATCATGGGGCCAGAGCAGAGAACAAGACCAGCTCCCTGCCAGACCAGAAAGCCACAGAGTAAGAGAAGTGATTTGATGGGAACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475725.1
ENST00000498743.1
CDS-3UTR CAA 90 bp CAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGGTTTGGGAAAGAGGTAAAACGAGCTCAGGGGCACTaGTCTCCTTCAGCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: QILDKPRHKCSRFGKEVKRAQGH*SPSARW
Trigger: CCACCTGGCTGAAGGAGACAAGTGCCCCTGAGCTCG...TTTTACCTCTTTCCCAAACCTGGAGCATTTATGCCTAGGCTTGTCAAGAATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp TGCTGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGACAGGACTGTAGCAGGTaGATAGCTTTAGGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: CCKLGSRRGILGALMGIRQDCSR*IALGVR
Trigger: CCTCACCCCTAAAGCTATCAACCTGCTACAGTCCTG...TCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp AGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGGTTTCAGAAGGGACACTGTTaGCTTCAGCCTCTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: RRGTEQILDKPRHKCSRFQKGHC*LQPLGL
Trigger: CAGGCCCAGAGGCTGAAGCAAACAGTGTCCCTTCTG...AAACCTGGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp TACTGGGGAGGCTCCAACACAGCCAGAAGGGACACTGTTTGCTTCAGCCTCTGGGGACTGAACAGATTCTaGACAAGCCTAGGCATAAAT +
Preference number: 5 (lower is better)
Translates to: YWGGSNTARRDTVCFSLWGLNRF*TSLGIN
Trigger: ATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCC...CCAGAGGCTGAAGCAAACAGTGTCCCTTCTGGCTGTGTTGGAGCCTCCCCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS CCA 90 bp CAAATCACTTCTCTTACTCTGTGGCTTTCTGGTCTGGCAGGGAGCTaGTCTTGTTCTCTGCTCTGGCCCCATGATAAAGTTGGCACACTA +
Preference number: 5 (lower is better)
Translates to: QITSLTLWLSGLAGS*SCSLLWPHDKVGTL
Trigger: TAGTGTGCCAACTTTATCATGGGGCCAGAGCAGAGAACAAGACCAGCTCCCTGCCAGACCAGAAAGCCACAGAGTAAGAGAAGTGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475725.1
ENST00000498743.1
CDS CCA 90 bp ATCAGAGTCCATCTCATCTCACAGCCAACCACAGCCCCTAACATCTaGGTCCCTTCTCCAGGTTCCCATCAAATCACTTCTCTTACTCTG +
Preference number: 5 (lower is better)
Translates to: IRVHLISQPTTAPNI*VPSPGSHQITSLTL
Trigger: CAGAGTAAGAGAAGTGATTTGATGGGAACCTGGAGAAGGGACCCAGATGTTAGGGGCTGTGGTTGGCTGTGAGATGAGATGGACTCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498743.1
CDS-3UTR CAA 90 bp TTGAAGATGCTTTTATTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTCTGCAGGATCAAGTCTaGGCTCCACACCCGGCCCTG +
Preference number: 5 (lower is better)
Translates to: LKMLLLRRRGTEQILDKPLQDQV*APHPAL
Trigger: CAGGGCCGGGTGTGGAGCCAAGACTTGATCCTGCAG...AGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAATAAAAGCATCTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp AGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGGTTTATCAGATCTGCCATCTaGCATCAGCGGGGCCTGGTT +
Preference number: 5 (lower is better)
Translates to: RRGTEQILDKPRHKCSRFIRSAI*HQRGLV
Trigger: AACCAGGCCCCGCTGATGCAAGATGGCAGATCTGAT...AAACCTGGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp TGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTCTCTGGGCCTGTCCATaGTTTTTGCTGTGTGAGCTG +
Preference number: 5 (lower is better)
Translates to: CKLGSRRGILGALMGIRSLWACP*FLLCEL
Trigger: CAGCTCACACAGCAAAAACAATGGACAGGCCCAGAG...AGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp GGGGCTCTAATGGGTATCAGATCTGCCATCTTGCATCAGCGGGGCCTGGTTCTTGGACTGAACAGATTCTaGACAAGCCTAGGCATAAAT +
Preference number: 5 (lower is better)
Translates to: GALMGIRSAILHQRGLVLGLNRF*TSLGIN
Trigger: ATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCC...AAGAACCAGGCCCCGCTGATGCAAGATGGCAGATCTGATACCCATTAGAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp GAAAGAGGTAAAATAAATAGGTGGTTACTGGGGAGGCTCCAACACAGCCAGAAGCTCTGGGCCTGTCCATaGTTTTTGCTGTGTGAGCTG +
Preference number: 5 (lower is better)
Translates to: ERGKINRWLLGRLQHSQKLWACP*FLLCEL
Trigger: CAGCTCACACAGCAAAAACAATGGACAGGCCCAGAG...CTTCTGGCTGTGTTGGAGCCTCCCCAGTAACCACCTATTTATTTTACCTCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp TTGAAGATGCTTTTATTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTGAGTCCAGCTCCTCCTaGGTCTCAATGTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LKMLLLRRRGTEQILDKPESSSS*VSMSSS
Trigger: GCTGCTGGACATTGAGACCAAGGAGGAGCTGGACTC...AGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAATAAAAGCATCTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp TGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTAGGTTGAAGCTGTGCTaGATCTTCTGGAAGCAGTCA +
Preference number: 5 (lower is better)
Translates to: CKLGSRRGILGALMGIRSRLKLC*IFWKQS
Trigger: TGACTGCTTCCAGAAGATCAAGCACAGCTTCAACCT...AGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp TGCAAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTATGAAGTTCAGGGACTaGAAGAGGATGTGTACGAGC +
Preference number: 5 (lower is better)
Translates to: CKLGSRRGILGALMGIRSMKFRD*KRMCTS
Trigger: GCTCGTACACATCCTCTTCAAGTCCCTGAACTTCAT...AGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp TTGAAGATGCTTTTATTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTCAGAAGGGACACTGTTaGCTTCAGCCTCTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: LKMLLLRRRGTEQILDKPQKGHC*LQPLGL
Trigger: CAGGCCCAGAGGCTGAAGCAAACAGTGTCCCTTCTG...AGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAATAAAAGCATCTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp ACAAGCTTGAAGATGCTTTTATTGAGAAGGAGAGGGACTGAACAGATTCTTGACTCCAAGTCGAGGTCTTaGCTCCAGCTCTTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: TSLKMLLLRRRGTEQILDSKSRS*LQLFLQ
Trigger: CTGGAGGAAGAGCTGGAGCAAAGACCTCGACTTGGA...GTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAATAAAAGCATCTTCAAGCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361852.8
ENST00000361965.9
CDS-3UTR CAA 90 bp AGGAGAGGGACTGAACAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGGTTTAAACTCGTACAAGACTaGCATTTTCAGGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: RRGTEQILDKPRHKCSRFKLVQD*HFQGWL
Trigger: CAGCCAGCCCTGAAAATGCAAGTCTTGTACGAGTTT...AAACCTGGAGCATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp CAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGGTTTGGGAAAGAGGTAAAAGCCTGTCCATTGTTTTaGCTGTGTGAGCTGGGGTGT +
Preference number: 5 (lower is better)
Translates to: QILDKPRHKCSRFGKEVKACPLF*LCELGC
Trigger: ACACCCCAGCTCACACAGCAAAAACAATGGACAGGC...TTTTACCTCTTTCCCAAACCTGGAGCATTTATGCCTAGGCTTGTCAAGAATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp AAACTGGGATCCAGAAGAGGAATTCTCGGGGCTCTAATGGGTATCAGATCTGCCGGACTGAACAGATTCTaGACAAGCCTAGGCATAAAT +
Preference number: 5 (lower is better)
Translates to: KLGSRRGILGALMGIRSAGLNRF*TSLGIN
Trigger: ATTTATGCCTAGGCTTGTCAAGAATCTGTTCAGTCC...GGCAGATCTGATACCCATTAGAGCCCCGAGAATTCCTCTTCTGGATCCCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp CAGATTCTTGACAAGCCTAGGCATAAATGCTCCAGGTTTGGGAAAGAGGTAAAAATGAAGTTCAGGGACTaGAAGAGGATGTGTACGAGC +
Preference number: 5 (lower is better)
Translates to: QILDKPRHKCSRFGKEVKMKFRD*KRMCTS
Trigger: GCTCGTACACATCCTCTTCAAGTCCCTGAACTTCAT...TTTTACCTCTTTCCCAAACCTGGAGCATTTATGCCTAGGCTTGTCAAGAATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS-3UTR CAA 90 bp TTGAAGATGCTTTTATTGAGAAGGAGAGGGACTGAACAGATTCTTGACAAGCCTAAACTCGTACAAGACTaGCATTTTCAGGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: LKMLLLRRRGTEQILDKPKLVQD*HFQGWL
Trigger: CAGCCAGCCCTGAAAATGCAAGTCTTGTACGAGTTT...AGGCTTGTCAAGAATCTGTTCAGTCCCTCTCCTTCTCAATAAAAGCATCTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS TCA 72 bp GGCGTGCTCCACCCTGTGCTGCAGGAGGGTGGGCTCTaGGGTGAGGTTCTGGGAGTACTCCTTCCGGTGCAA +
Preference number: 6 (lower is better)
Translates to: GVLHPVLQEGGL*GEVLGVLLPVQ
Trigger: TTGCACCGGAAGGAGTACTCCCAGAACCTCACCTCAGAGCCCACCCTCCTGCAGCACAGGGTGGAGCACGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS GCA 72 bp GACAGGACACTCACCCGCTCAACCTCCAGCCAGGCCTaGTCTGTTCAATCTGACCACCCCTCCCCGTCCCTG +
Preference number: 6 (lower is better)
Translates to: DRTLTRSTSSQA*SVQSDHPSPSL
Trigger: CAGGGACGGGGAGGGGTGGTCAGATTGAACAGAGCAGGCCTGGCTGGAGGTTGAGCGGGTGAGTGTCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477568.1
CDS CCA 72 bp GGGGGAGTCCTAGGACTGGGAGAAAGCTCAGAGAGGTaGACCACAGGCGTGCTCCACCCTGTGCTGCAGGAG +
Preference number: 6 (lower is better)
Translates to: GGVLGLGESSER*TTGVLHPVLQE
Trigger: CTCCTGCAGCACAGGGTGGAGCACGCCTGTGGTCCACCTCTCTGAGCTTTCTCCCAGTCCTAGGACTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472325.5
CDS CCA 72 bp AGGAGGCTGGTCTTGGAGCAGGTGGTCCGGTGCTGGTaGTGGAAGGACAGCAGCTTCTCTGCTAGTGGCCAC +
Preference number: 6 (lower is better)
Translates to: RRLVLEQVVRCW*WKDSSFSASGH
Trigger: GTGGCCACTAGCAGAGAAGCTGCTGTCCTTCCACCACCAGCACCGGACCACCTGCTCCAAGACCAGCCTCCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369805.7
CDS CCA 72 bp CAGGGCGGTGGGCACATGGGAACACTTGGGTTTAGTTaGACACTGCCCGGGGGCTGCAGAGGTACTCACCTC +
Preference number: 6 (lower is better)
Translates to: QGGGHMGTLGFS*TLPGGCRGTHL
Trigger: GAGGTGAGTACCTCTGCAGCCCCCGGGCAGTGTCCAACTAAACCCAAGTGTTCCCATGTGCCCACCGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477568.1
CDS CAA 72 bp CCATGTTCTGGCAGGGCGGTGGGCACATGGGAACACTaGGGTTTAGTTGGACACTGCCCGGGGGCTGCAGAG +
Preference number: 6 (lower is better)
Translates to: PCSGRAVGTWEH*GLVGHCPGAAE
Trigger: CTCTGCAGCCCCCGGGCAGTGTCCAACTAAACCCAAGTGTTCCCATGTGCCCACCGCCCTGCCAGAACATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477568.1
CDS TCA 72 bp GGGACAGGCTGTTGGCTTCTGGGGCAGGGACTTGTGTaGAGTGTCCATGTTCTGGCAGGGCGGTGGGCACAT +
Preference number: 6 (lower is better)
Translates to: GTGCWLLGQGLV*SVHVLAGRWAH
Trigger: ATGTGCCCACCGCCCTGCCAGAACATGGACACTTCACACAAGTCCCTGCCCCAGAAGCCAACAGCCTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477568.1
CDS GCA 72 bp GGAACACTTGGGTTTAGTTGGACACTGCCCGGGGGCTaGAGAGGTACTCACCTCCACCCTGTGCTGCAGGAG +
Preference number: 6 (lower is better)
Translates to: GTLGFSWTLPGG*RGTHLHPVLQE
Trigger: CTCCTGCAGCACAGGGTGGAGGTGAGTACCTCTGCAGCCCCCGGGCAGTGTCCAACTAAACCCAAGTGTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477568.1
CDS GCA 72 bp GTGGGCACATGGGAACACTTGGGTTTAGTTGGACACTaGCCGGGGGCTGCAGAGGTACTCACCTCCACCCTG +
Preference number: 6 (lower is better)
Translates to: VGTWEHLGLVGH*PGAAEVLTSTL
Trigger: CAGGGTGGAGGTGAGTACCTCTGCAGCCCCCGGGCAGTGTCCAACTAAACCCAAGTGTTCCCATGTGCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477568.1
CDS GCA 72 bp TCCGTCCCGCCTCATTCTTCACCAGCCACCACCGCTTaGTGTGGTCCAGAACCTGCCAAGAGTCACCACCTC +
Preference number: 6 (lower is better)
Translates to: SVPPHSSPATTA*CGPEPAKSHHL
Trigger: GAGGTGGTGACTCTTGGCAGGTTCTGGACCACAGCAAGCGGTGGTGGCTGGTGAAGAATGAGGCGGGACGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489465.1
CDS CAA 72 bp CTCCGTCCCGCCTCATTCTTCACCAGCCACCACCGCTaGCTGTGGTCCAGAACCTGCCAAGAGTCACCACCT +
Preference number: 6 (lower is better)
Translates to: LRPASFFTSHHR*LWSRTCQESPP
Trigger: AGGTGGTGACTCTTGGCAGGTTCTGGACCACAGCAAGCGGTGGTGGCTGGTGAAGAATGAGGCGGGACGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489465.1
CDS CAA 90 bp GTGAAGTGTCCATGTTCTGGCAGGGCGGTGGGCACATGGGAACACTaGGGTTTAGTTGGACACTGCCCGGGGGCTGCAGAGGTACTCACC +
Preference number: 6 (lower is better)
Translates to: VKCPCSGRAVGTWEH*GLVGHCPGAAEVLT
Trigger: GGTGAGTACCTCTGCAGCCCCCGGGCAGTGTCCAACTAAACCCAAGTGTTCCCATGTGCCCACCGCCCTGCCAGAACATGGACACTTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477568.1
CDS CAA 90 bp CATGCGACATGGTTGGGACAGGCTGTTGGCTTCTGGGGCAGGGACTaGTGTGAAGTGTCCATGTTCTGGCAGGGCGGTGGGCACATGGGA +
Preference number: 6 (lower is better)
Translates to: HATWLGQAVGFWGRD*CEVSMFWQGGGHMG
Trigger: TCCCATGTGCCCACCGCCCTGCCAGAACATGGACACTTCACACAAGTCCCTGCCCCAGAAGCCAACAGCCTGTCCCAACCATGTCGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477568.1
CDS TCA 72 bp GCTCCACCCTGTGCTGCAGGAGGGTGGGCTCTGAGGTaGGGTTCTGGGAGTACTCCTTCCGGTGCAAGTAAA +
Preference number: 6 (lower is better)
Translates to: APPCAAGGWALR*GSGSTPSGASK
Trigger: TTTACTTGCACCGGAAGGAGTACTCCCAGAACCTCACCTCAGAGCCCACCCTCCTGCAGCACAGGGTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
ENST00000472325.5
CDS TCA 72 bp AGCTTCTGCAAGGCATCCTCGGGCCCCTGGACTCTCTaGCTCCCCTGCTTGCATGTCATCAAGTGCTCCACC +
Preference number: 6 (lower is better)
Translates to: SFCKASSGPWTL*LPCLHVIKCST
Trigger: GGTGGAGCACTTGATGACATGCAAGCAGGGGAGTCAGAGAGTCCAGGGGCCCGAGGATGCCTTGCAGAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
CDS TCA 72 bp CCTCCACCCTGTGCTGCAGGAGGGTGGGCTCTGAGGTaGGGTTCTGGGAGTACTCCTTCCGGTGCAAGTAAA +
Preference number: 6 (lower is better)
Translates to: PPPCAAGGWALR*GSGSTPSGASK
Trigger: TTTACTTGCACCGGAAGGAGTACTCCCAGAACCTCACCTCAGAGCCCACCCTCCTGCAGCACAGGGTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477568.1
CDS GCA 72 bp CCCAAGTGTCCTCACCGTGGCAGTGGAGAAGTTCTCTaGCTGCAGCCAGTCTGTGACCTCTTCAGGCCTCGA +
Preference number: 6 (lower is better)
Translates to: PKCPHRGSGEVL*LQPVCDLFRPR
Trigger: TCGAGGCCTGAAGAGGTCACAGACTGGCTGCAGGCAGAGAACTTCTCCACTGCCACGGTGAGGACACTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
ENST00000498743.1
CDS GCA 72 bp TTCACCAGCCACCACCGCTTGCTGTGGTCCAGAACCTaGCAAGAGTCACCACCTCAGTCCCCTGAGCCTCTT +
Preference number: 6 (lower is better)
Translates to: FTSHHRLLWSRT*QESPPQSPEPL
Trigger: AAGAGGCTCAGGGGACTGAGGTGGTGACTCTTGGCAGGTTCTGGACCACAGCAAGCGGTGGTGGCTGGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489465.1
CDS CCA 72 bp AGCATCTGTAGCTCCCCAGGTCTTATGCGAAGTAGCTaGCTCCCCGTCAGGGACCCAAGTGTCCTCACCGTG +
Preference number: 6 (lower is better)
Translates to: SICSSPGLMRSS*LPVRDPSVLTV
Trigger: CACGGTGAGGACACTTGGGTCCCTGACGGGGAGCCAGCTACTTCGCATAAGACCTGGGGAGCTACAGATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
ENST00000498743.1
CDS GCA 72 bp CCTGTGGACATAGCATCTGTAGCTCCCCAGGTCTTATaGGAAGTAGCTGGCTCCCCGTCAGGGACCCAAGTG +
Preference number: 6 (lower is better)
Translates to: PVDIASVAPQVL*EVAGSPSGTQV
Trigger: CACTTGGGTCCCTGACGGGGAGCCAGCTACTTCGCATAAGACCTGGGGAGCTACAGATGCTATGTCCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361852.8
ENST00000361965.9
ENST00000369805.7
ENST00000498743.1
CDS CAA 72 bp AGCTTCTCTGCTAGTGGCCACAGGCAGAGCCTGCCTTaGATGAGGTTACAGAGGCAGCCACGCCTGTGCTCT +
Preference number: 6 (lower is better)
Translates to: SFSASGHRQSLP*MRLQRQPRLCS
Trigger: AGAGCACAGGCGTGGCTGCCTCTGTAACCTCATCAAAGGCAGGCTCTGCCTGTGGCCACTAGCAGAGAAGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369805.7
CDS CAA 90 bp AAGGACAGCAGCTTCTCTGCTAGTGGCCACAGGCAGAGCCTGCCTTaGATGAGGTTACAGAGGCAGCCACGCCTGTGCTCTTTGGACTCT +
Preference number: 6 (lower is better)
Translates to: KDSSFSASGHRQSLP*MRLQRQPRLCSLDS
Trigger: AGAGTCCAAAGAGCACAGGCGTGGCTGCCTCTGTAACCTCATCAAAGGCAGGCTCTGCCTGTGGCCACTAGCAGAGAAGCTGCTGTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369805.7
CDS TCA 72 bp GACACTGAGCAGATGCTCTGGCAGGCTTGTTGGATCTaGGTCCATGCGACATGGTTGGGACAGGCTGTTGGC +
Preference number: 6 (lower is better)
Translates to: DTEQMLWQACWI*VHATWLGQAVG
Trigger: GCCAACAGCCTGTCCCAACCATGTCGCATGGACTCAGATCCAACAAGCCTGCCAGAGCATCTGCTCAGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477568.1
CDS CAA 90 bp AGGCTTGTTGGATCTGAGTCCATGCGACATGGTTGGGACAGGCTGTaGGCTTCTGGGGCAGGGACTTGTGTGAAGTGTCCATGTTCTGGC +
Preference number: 6 (lower is better)
Translates to: RLVGSESMRHGWDRL*ASGAGTCVKCPCSG
Trigger: GCCAGAACATGGACACTTCACACAAGTCCCTGCCCCAGAAGCCAACAGCCTGTCCCAACCATGTCGCATGGACTCAGATCCAACAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477568.1
CDS CCA 72 bp AGCTTCAAACTCGTACAAGACTTGCATTTTCAGGGCTaGCTGGGCAGGTTTGGGGCTGGAGGGCCTGGAGTT +
Preference number: 6 (lower is better)
Translates to: SFKLVQDLHFQG*LGRFGAGGPGV
Trigger: AACTCCAGGCCCTCCAGCCCCAAACCTGCCCAGCCAGCCCTGAAAATGCAAGTCTTGTACGAGTTTGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361965.9
ENST00000369805.7
ENST00000482453.1
CDS CCA 72 bp ATCAAATCACTTCTCTTACTCTGTGGCTTTCTGGTCTaGCAGGGAGCTGGTCTTGTTCTCTGCTCTGGCCCC +
Preference number: 6 (lower is better)
Translates to: IKSLLLLCGFLV*QGAGLVLCSGP
Trigger: GGGGCCAGAGCAGAGAACAAGACCAGCTCCCTGCCAGACCAGAAAGCCACAGAGTAAGAGAAGTGATTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475725.1
ENST00000498743.1
CDS CCA 72 bp TCTCTTACTCTGTGGCTTTCTGGTCTGGCAGGGAGCTaGTCTTGTTCTCTGCTCTGGCCCCATGATAAAGTT +
Preference number: 6 (lower is better)
Translates to: SLTLWLSGLAGS*SCSLLWPHDKV
Trigger: AACTTTATCATGGGGCCAGAGCAGAGAACAAGACCAGCTCCCTGCCAGACCAGAAAGCCACAGAGTAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475725.1
ENST00000498743.1
CDS CCA 72 bp CATCTCATCTCACAGCCAACCACAGCCCCTAACATCTaGGTCCCTTCTCCAGGTTCCCATCAAATCACTTCT +
Preference number: 6 (lower is better)
Translates to: HLISQPTTAPNI*VPSPGSHQITS
Trigger: AGAAGTGATTTGATGGGAACCTGGAGAAGGGACCCAGATGTTAGGGGCTGTGGTTGGCTGTGAGATGAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498743.1
CDS CCA 72 bp TCTCCAGGTTCCCATCAAATCACTTCTCTTACTCTGTaGCTTTCTGGTCTGGCAGGGAGCTGGTCTTGTTCT +
Preference number: 6 (lower is better)
Translates to: SPGSHQITSLTL*LSGLAGSWSCS
Trigger: AGAACAAGACCAGCTCCCTGCCAGACCAGAAAGCCACAGAGTAAGAGAAGTGATTTGATGGGAACCTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475725.1
ENST00000498743.1