RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPS8L1 (Homo sapiens)

Ensembl gene IDs: ENSG00000131037

Ensembl transcript IDs: ENST00000201647.11, ENST00000245618.5, ENST00000540810.5, ENST00000585347.5, ENST00000586329.5, ENST00000587715.1, ENST00000587786.5, ENST00000587901.1, ENST00000588359.5, ENST00000589362.5, ENST00000589694.1, ENST00000590232.1, ENST00000590610.5, ENST00000591219.5, ENST00000592044.1, ENST00000592102.5, ENST00000592284.5, ENST00000592318.1, ENST00000592824.5

Found 565 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTaGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACT +
Preference number: 1 (lower is better)
Translates to: GRSRLAILQKIDFRY*GESEESVLPRGLVT
Trigger: AGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
3UTR TCA 90 bp ATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTaGGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGG +
Preference number: 1 (lower is better)
Translates to: IGHPSEDRLPLLGRV*GVRSPTGPRHSLRR
Trigger: CCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
3UTR CCA 90 bp CCAGAAACTTGCCCCCAAGCCCTTGAAGTCCCAAGCCTGCTCCTCTaGGTCTCCAGGATCCCAAGCACCAGACTTGGGCTCTTCTTCAAA +
Preference number: 1 (lower is better)
Translates to: PETCPQALEVPSLLL*VSRIPSTRLGLFFK
Trigger: TTTGAAGAAGAGCCCAAGTCTGGTGCTTGGGATCCTGGAGACCCAGAGGAGCAGGCTTGGGACTTCAAGGGCTTGGGGGCAAGTTTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587786.5
3UTR CCA 90 bp TGCTTCCCAGGCCCTGGGAAAACAAACTGGCTTCTTCCAGCCTTTTaGGGATCCAGGGATCCAACCTCTCAGACTTTACCCACTCCCAGC +
Preference number: 1 (lower is better)
Translates to: CFPGPGKTNWLLPAF*GSRDPTSQTLPTPS
Trigger: GCTGGGAGTGGGTAAAGTCTGAGAGGTTGGATCCCTGGATCCCCAAAAGGCTGGAAGAAGCCAGTTTGTTTTCCCAGGGCCTGGGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587786.5
3UTR-3UTR TCA 90 bp GTCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCCTATTGGGGAGAGTCTaGGGAGTCCGTTCTCCCACG +
Preference number: 2 (lower is better)
Translates to: VCPPGWGKTRAGADWPSFLLGRV*GVRSPT
Trigger: CGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAG...GAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
3UTR-3UTR CCA 90 bp CTCGGGGGTCTGCTAGCGCTTTCCGTAGACTGTCTCCACGCCCTCCCCACTCCCAGGGCCGGAGCAGATTaGCCATCCTTCAGAAGATCG +
Preference number: 2 (lower is better)
Translates to: LGGLLALSVDCLHALPTPRAGAD*PSFRRS
Trigger: CGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCT...GGGAGTGGGGAGGGCGTGGAGACAGTCTACGGAAAGCGCTAGCAGACCCCCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000586329.5
3UTR-3UTR TCA 90 bp TCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCACTATTGGGGAGAGTCTaGGGAGTCCGTTCTCCCACG +
Preference number: 2 (lower is better)
Translates to: SVHRDGGRPGPEQIGHPSLLGRV*GVRSPT
Trigger: CGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAG...TGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
3UTR-3UTR CCA 90 bp CCACTGCACCCTCTCGGGGGTCTGCTAGCGCTTTCCGTAGACTGTCTCCACGCCAGGGCCGGAGCAGATTaGCCATCCTTCAGAAGATCG +
Preference number: 2 (lower is better)
Translates to: PLHPLGGLLALSVDCLHARAGAD*PSFRRS
Trigger: CGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCT...GGCGTGGAGACAGTCTACGGAAAGCGCTAGCAGACCCCCGAGAGGGTGCAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000586329.5
3UTR-3UTR CCA 90 bp CCAGCCTTTTGGGGATCCAGGGATCCAACCTCTCAGACTTTACCCACTCCCAGCTTAGCCCCAGAAGTCTaGGTCCCGCCCCCTCCCACC +
Preference number: 2 (lower is better)
Translates to: PAFWGSRDPTSQTLPTPSLAPEV*VPPPPT
Trigger: GGTGGGAGGGGGCGGGACCCAGACTTCTGGGGCTAA...GCTGGGAGTGGGTAAAGTCTGAGAGGTTGGATCCCTGGATCCCCAAAAGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000587786.5
3UTR-3UTR CCA 90 bp GTCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCACCGGAGGGCCGGAGCAGATTaGCCATCCTTCAGAAGATCG +
Preference number: 2 (lower is better)
Translates to: VQILSGGTAARIVKSVHRRAGAD*PSFRRS
Trigger: CGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCT...CCGGTGGACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
3UTR CAA 90 bp TTAAGTCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATaGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCT +
Preference number: 2 (lower is better)
Translates to: LSLSTGMGEDQGRSR*AILQKIDFRYWGES
Trigger: AGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGACTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
3UTR-3UTR TCA 90 bp GAGTTTAATCGTCCAGCCTTTACCCCTCTCGGGGGCCCAGAGATACTACCACTTTTGCCCCCAAGCCCTTaGAGTCCCAAGCCTGCTCCT +
Preference number: 2 (lower is better)
Translates to: EFNRPAFTPLGGPEILPLLPPSP*SPKPAP
Trigger: AGGAGCAGGCTTGGGACTTCAAGGGCTTGGGGGCAA...AAGTGGTAGTATCTCTGGGCCCCCGAGAGGGGTAAAGGCTGGACGATTAAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000587786.5
3UTR-3UTR CCA 90 bp AGGATCGTTAAGTCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTATCGACTTCCGCTATTaGGGAGAGTCTGAGGAGTCC +
Preference number: 2 (lower is better)
Translates to: RIVKSVHRDGGRPGPEQIIDFRY*GESEES
Trigger: GGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGAT...AATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGACTTAACGATCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
3UTR-3UTR GCA 90 bp CCAGGATCCCAAGCACCAGACTTGGGCTCTTCTTCAAAACCCAAAGGTCCAATTGGAGCCCAGGCATGGTaGTTCCCAGGCCCTGGGAAA +
Preference number: 2 (lower is better)
Translates to: PGSQAPDLGSSSKPKGPIGAQAW*FPGPGK
Trigger: TTTCCCAGGGCCTGGGAAGCACCATGCCTGGGCTCC...AATTGGACCTTTGGGTTTTGAAGAAGAGCCCAAGTCTGGTGCTTGGGATCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587786.5
3UTR-3UTR CCA 90 bp TCCCAGCCAGTCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTATCGACTTCCGCTATTaGGGAGAGTCTGAGGAGTCC +
Preference number: 2 (lower is better)
Translates to: SQPVQILSGGTAARIVKSIDFRY*GESEES
Trigger: GGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGAT...AGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGACTGGCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
3UTR CAA 90 bp GTTTTCGTCTCCTCCCACGTTGCTTCCCTCCAGTCTGCCCTCTATTaGCTCAAGGACCCTAGAGTTCTAGTCCATCTACCTCCTTCCCTC +
Preference number: 2 (lower is better)
Translates to: VFVSSHVASLQSALY*LKDPRVLVHLPPSL
Trigger: GAGGGAAGGAGGTAGATGGACTAGAACTCTAGGGTCCTTGAGCAAATAGAGGGCAGACTGGAGGGAAGCAACGTGGGAGGAGACGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587786.5
3UTR CAA 90 bp TTTGTCTCCTCCAGCCTCACTGCTTTGTTTTCGTCTCCTCCCACGTaGCTTCCCTCCAGTCTGCCCTCTATTTGCTCAAGGACCCTAGAG +
Preference number: 2 (lower is better)
Translates to: FVSSSLTALFSSPPT*LPSSLPSICSRTLE
Trigger: CTCTAGGGTCCTTGAGCAAATAGAGGGCAGACTGGAGGGAAGCAACGTGGGAGGAGACGAAAACAAAGCAGTGAGGCTGGAGGAGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587786.5
3UTR-3UTR GCA 90 bp CCAGAGTCTGAGCCCCCACTGCTTGGTAGAACCATGACTTGGAATGTTCTTTCCTTGAAGTCCCAAGCCTaGTCCTCTGGGTCTCCAGGA +
Preference number: 2 (lower is better)
Translates to: PESEPPLLGRTMTWNVLSLKSQA*SSGSPG
Trigger: TCCTGGAGACCCAGAGGAGCAGGCTTGGGACTTCAA...GGAAAGAACATTCCAAGTCATGGTTCTACCAAGCAGTGGGGGCTCAGACTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587786.5
3UTR-3UTR CCA 90 bp TCCAGCCTCACTGCTTTGTTTTCGTCTCCTCCCACGTTGCTTCCCTCCAGTCTGGGTAGAACCATGACTTaGAATGTTCTTTCCTCCCCC +
Preference number: 2 (lower is better)
Translates to: SSLTALFSSPPTLLPSSLGRTMT*NVLSSP
Trigger: GGGGGAGGAAAGAACATTCCAAGTCATGGTTCTACC...CAGACTGGAGGGAAGCAACGTGGGAGGAGACGAAAACAAAGCAGTGAGGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587786.5
3UTR-3UTR GCA 90 bp TTCGTCTCCTCCCACGTTGCTTCCCTCCAGTCTGCCCTCTATTTGCTCAAGGACAGCGACTTAGACAATTaGATTAGAGCCTCTGGAAAA +
Preference number: 2 (lower is better)
Translates to: FVSSHVASLQSALYLLKDSDLDN*IRASGK
Trigger: TTTTCCAGAGGCTCTAATGCAATTGTCTAAGTCGCT...GTCCTTGAGCAAATAGAGGGCAGACTGGAGGGAAGCAACGTGGGAGGAGACGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587786.5
3UTR-3UTR CAA 90 bp CAGTCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCACCGGGCCTCGTCACTCTTaGCGAAGGGCGCCTGGCAGG +
Preference number: 3 (lower is better)
Translates to: QSRSSPEGLQQGSLSLSTGPRHS*RRAPGR
Trigger: CCTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCC...GGTGGACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
3UTR CCA 72 bp CCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTaGCCATCCTTCAGAAGATCGACTTCCGCTATTGGG +
Preference number: 3 (lower is better)
Translates to: PPGWGKTRAGAD*PSFRRSTSAIG
Trigger: CCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
3UTR-3UTR CAA 90 bp GCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGGGGCCTCGTCACTCTTaGCGAAGGGCGCCTGGCAGG +
Preference number: 3 (lower is better)
Translates to: ADWPSFRRSTSAIGESLRGPRHS*RRAPGR
Trigger: CCTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCC...CCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
3UTR GCA 72 bp ACGGAGGCTGTTTATAGGCTGGGCCGCATATTACAATaGTCAGGGCTCCACTGCACCCTCTCGGGGGTCTGC +
Preference number: 3 (lower is better)
Translates to: TEAVYRLGRILQ*SGLHCTLSGVC
Trigger: GCAGACCCCCGAGAGGGTGCAGTGGAGCCCTGAGCATTGTAATATGCGGCCCAGCCTATAAACAGCCTCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000586329.5
3UTR GCA 72 bp CAGAAACTTGCCCCCAAGCCCTTGAAGTCCCAAGCCTaGTCCTCTGGGTCTCCAGGATCCCAAGCACCAGAC +
Preference number: 3 (lower is better)
Translates to: QKLAPKPLKSQA*SSGSPGSQAPD
Trigger: GTCTGGTGCTTGGGATCCTGGAGACCCAGAGGAGCAGGCTTGGGACTTCAAGGGCTTGGGGGCAAGTTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587786.5
3UTR-3UTR CAA 90 bp GATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTGGGCCTCGTCACTCTTaGCGAAGGGCGCCTGGCAGG +
Preference number: 3 (lower is better)
Translates to: DWPSFRRSTSAIGESLRSGPRHS*RRAPGR
Trigger: CCTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCC...ACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
3UTR-3UTR CAA 90 bp AGCCAGTCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCCAGGGCCGGAGCAGATaGGCCATCCTTCAGAAGATC +
Preference number: 3 (lower is better)
Translates to: SQSRSSPEGLQQGSLSLSQGRSR*AILQKI
Trigger: GATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTG...GGACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGACTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
3UTR TCA 72 bp CCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTaGGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCT +
Preference number: 3 (lower is better)
Translates to: PSEDRLPLLGRV*GVRSPTGPRHS
Trigger: AGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
3UTR CCA 72 bp AGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTaGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGC +
Preference number: 3 (lower is better)
Translates to: RLAILQKIDFRY*GESEESVLPRG
Trigger: GCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
3UTR GCA 72 bp CCAGCCTCACTGCTTTGTTTTCGTCTCCTCCCACGTTaGTTCCCTCCAGTCTGCCCTCTATTTGCTCAAGGA +
Preference number: 3 (lower is better)
Translates to: PASLLCFRLLPR*FPPVCPLFAQG
Trigger: TCCTTGAGCAAATAGAGGGCAGACTGGAGGGAAGCAACGTGGGAGGAGACGAAAACAAAGCAGTGAGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR TCA 90 bp GAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCGGCTCTGCGGGTCAGTaGCCGGCGGCTCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: ESEESVLPRGLVTLCEGRGSAGQ*PAAPSR
Trigger: GCGGCTGGGAGCCGCCGGTCACTGACCCGCAGAGCC...GCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR TCA 90 bp GAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCGATCACTGCGCGGACTaGCGGGCGGCGCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ESEESVLPRGLVTLCEGRDHCAD*RAALQG
Trigger: CCCCTGCAGCGCCGCCCGTCAGTCCGCGCAGTGATC...GCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR TCA 90 bp GGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCTCTGCGGGTCAGTaGCCGGCGGCTCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GESLRSPFSHGASSLFAKGSAGQ*PAAPSR
Trigger: GCGGCTGGGAGCCGCCGGTCACTGACCCGCAGAGCC...CTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR TCA 90 bp AGTCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTGGCTCTGCGGGTCAGTaGCCGGCGGCTCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SLSTGMGEDQGRSRLAILGSAGQ*PAAPSR
Trigger: GCGGCTGGGAGCCGCCGGTCACTGACCCGCAGAGCC...AAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp AGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCAGGTCGCTTGGGTCACCTaGCGGCGCCTCCGCTCGTGC +
Preference number: 4 (lower is better)
Translates to: RSPFSHGASSLFAKGAWQVAWVT*RRLRSC
Trigger: GCACGAGCGGAGGCGCCGGCAGGTGACCCAAGCGAC...CTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586329.5
ENST00000588359.5
CDS-3UTR CCA 90 bp GAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCACCTCCGAGGGCGGCTTaGCCCGCAGCGTCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: EESVLPRGLVTLCEGRLAPPRAA*PAASAS
Trigger: GCTTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGG...TGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR TCA 90 bp ATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGGGCTCTGCGGGTCAGTaGCCGGCGGCTCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: IGESLRSPFSHGASSLFAGSAGQ*PAAPSR
Trigger: GCGGCTGGGAGCCGCCGGTCACTGACCCGCAGAGCC...CGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR GCA 90 bp GGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCAGGCACCTGGAGGTGCCCTaGCTGCTCAGGCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: GVRSPTGPRHSLRRAPGRHLEVP*LLRLCP
Trigger: AGGGCAGAGCCTGAGCAGGCAGGGCACCTCCAGGTG...CCTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000201647.11
CDS-3UTR GCA 90 bp GAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCGGCGAGCGGTCGCGCTaGAACTCCTCCTGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: ESEESVLPRGLVTLCEGRGERSR*NSSCVA
Trigger: GGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC...GCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp GTCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCGTCGCTTGGGTCACCTaGCGGCGCCTCCGCTCGTGC +
Preference number: 4 (lower is better)
Translates to: VCPPGWGKTRAGADWPSFVAWVT*RRLRSC
Trigger: GCACGAGCGGAGGCGCCGGCAGGTGACCCAAGCGAC...GAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586329.5
CDS-3UTR CCA 90 bp GAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCACCGAGGCGCAGGCCCTaGAAGAAGTGCACGTCGGGC +
Preference number: 4 (lower is better)
Translates to: EESVLPRGLVTLCEGRLAPRRRP*KKCTSG
Trigger: GCCCGACGTGCACTTCTTCCAGGGCCTGCGCCTCGG...TGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp AGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCAGCCGAGGCGCAGGCCCTaGAAGAAGTGCACGTCGGGC +
Preference number: 4 (lower is better)
Translates to: RSPFSHGASSLFAKGAWQPRRRP*KKCTSG
Trigger: GCCCGACGTGCACTTCTTCCAGGGCCTGCGCCTCGG...CTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp GGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGGGAATGGGCTTCGCCTaGGGTCGTCCGCGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: GESEESVLPRGLVTLCEGGMGFA*GRPRPA
Trigger: CGCGGGCCGCGGACGACCCCAGGCGAAGCCCATTCC...CCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp AGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCAGCTGCGGGCAGGGCTTTaGCTGTGGTGCAGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: RSPFSHGASSLFAKGAWQLRAGL*LWCSRG
Trigger: ACCCCGGCTGCACCACAGCCAAAGCCCTGCCCGCAG...CTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR TCA 90 bp GGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCAGGGCGGCTCCCAGCCGCTaGAGAACTCGGGTCTGTATG +
Preference number: 4 (lower is better)
Translates to: GVRSPTGPRHSLRRAPGRAAPSR*RTRVCM
Trigger: CATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGC...CCTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR TCA 90 bp CCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGGGCTCTGCGGGTCAGTaGCCGGCGGCTCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PGPEQIGHPSEDRLPLLGGSAGQ*PAAPSR
Trigger: GCGGCTGGGAGCCGCCGGTCACTGACCCGCAGAGCC...CCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp GGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGAGCGGTCGCGCTaGAACTCCTCCTGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: GESLRSPFSHGASSLFAKGERSR*NSSCVA
Trigger: GGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC...CTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp GAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCACCTCTGCGCCTCCTCTaGCTCGGGAATGGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: EESVLPRGLVTLCEGRLAPLRLL*LGNGLR
Trigger: GCGAAGCCCATTCCCGAGGCAGAGGAGGCGCAGAGG...TGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp TCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAAGGGGTCGGCGATGTTaGCGCGCAGCCGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SVHRDGGRPGPEQIGHPSRGRRC*RAAGPA
Trigger: TGCTGGCCCGGCTGCGCGGCAACATCGCCGACCCCT...TGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp TGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAATCCCAGGCGCGGCTCTaGGGGTCAGTGACCGGCGGC +
Preference number: 4 (lower is better)
Translates to: WGESEESVLPRGLVTLCESQARL*GSVTGG
Trigger: GCCGCCGGTCACTGACCCGCAGAGCCGCGCCTGGGA...TTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR GCA 90 bp CTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGGGCACATATCCCTCCTaGCCCGCTGGGTCCCGAACC +
Preference number: 4 (lower is better)
Translates to: LRSPFSHGASSLFAKGAWGTYPS*PAGSRT
Trigger: GGTTCGGGACCCAGCGGGGCAGGAGGGATATGTGCC...CCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR CCA 90 bp TCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGCGGCTCCTGCCGGGTaGCATCACCGCGTCACAGCG +
Preference number: 4 (lower is better)
Translates to: SVHRDGGRPGPEQIGHPSAAPAG*HHRVTA
Trigger: CGCTGTGACGCGGTGATGCCACCCGGCAGGAGCCGC...TGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp TCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGGCGGCTCCTGCCGGGTaGCATCACCGCGTCACAGCG +
Preference number: 4 (lower is better)
Translates to: STGMGEDQGRSRLAILQKAAPAG*HHRVTA
Trigger: CGCTGTGACGCGGTGATGCCACCCGGCAGGAGCCGC...CTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp GGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGCCTCCGAGGGCGGCTTaGCCCGCAGCGTCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: GESLRSPFSHGASSLFAKPPRAA*PAASAS
Trigger: GCTTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGG...CTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp AGTCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTGCAGGGCTTTGGCTGTaGTGCAGCCGGGGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: SLSTGMGEDQGRSRLAILAGLWL*CSRGPG
Trigger: CCCCGGACCCCGGCTGCACCACAGCCAAAGCCCTGC...AAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR CCA 90 bp GGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGGCAGGGCTTTGGCTGTaGTGCAGCCGGGGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: GESEESVLPRGLVTLCEGAGLWL*CSRGPG
Trigger: CCCCGGACCCCGGCTGCACCACAGCCAAAGCCCTGC...CCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR CCA 90 bp GGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCAGGAGCTCCGCCTCGTCCTaGCTGCTCCCCCAGATCCTT +
Preference number: 4 (lower is better)
Translates to: GVRSPTGPRHSLRRAPGRSSASS*LLPQIL
Trigger: AAGGATCTGGGGGAGCAGCCAGGACGAGGCGGAGCT...CCTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000245618.5
CDS-3UTR TCA 90 bp CCACTGCACCCTCTCGGGGGTCTGCTAGCGCTTTCCGTAGACTGTCTCCACGCCCCGGGTCGAGCAGCGTaGCATGGTCGGGAGACACTC +
Preference number: 4 (lower is better)
Translates to: PLHPLGGLLALSVDCLHAPGRAA*HGRETL
Trigger: GAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGG...GGCGTGGAGACAGTCTACGGAAAGCGCTAGCAGACCCCCGAGAGGGTGCAGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000201647.11
ENST00000586329.5
CDS-3UTR TCA 90 bp GTCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCACCGGGATCACTGCGCGGACTaGCGGGCGGCGCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VQILSGGTAARIVKSVHRDHCAD*RAALQG
Trigger: CCCCTGCAGCGCCGCCCGTCAGTCCGCGCAGTGATC...CCGGTGGACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR TCA 90 bp CTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGGCGGCTCCCAGCCGCTaGAGAACTCGGGTCTGTATG +
Preference number: 4 (lower is better)
Translates to: LRSPFSHGASSLFAKGAWAAPSR*RTRVCM
Trigger: CATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGC...CCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR TCA 90 bp AGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCAGGCGGCTCCCAGCCGCTaGAGAACTCGGGTCTGTATG +
Preference number: 4 (lower is better)
Translates to: RSPFSHGASSLFAKGAWQAAPSR*RTRVCM
Trigger: CATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGC...CTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR TCA 90 bp CTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGTGGGGTCCAAGCCGTTaGGGCTATCGCAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LRSPFSHGASSLFAKGAWWGPSR*GYRSCP
Trigger: GGGACAGCTGCGATAGCCTCAACGGCTTGGACCCCA...CCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR GCA 90 bp TCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGAAGTGCACGTCGGGCTaGGCGCGCTCGGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: STGMGEDQGRSRLAILQKKCTSG*ARSGSW
Trigger: CCAGGAACCCGAGCGCGCGCAGCCCGACGTGCACTT...CTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp AGTCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTAGGCCCTGGAAGAAGTaGACGTCGGGCTGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: SLSTGMGEDQGRSRLAILRPWKK*TSGCAR
Trigger: GCGCGCGCAGCCCGACGTGCACTTCTTCCAGGGCCT...AAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp GGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCCGCTGCAACTCCTCCTaGGTGGCCCTGAGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: GEDQGRSRLAILQKIDFRRCNSS*VALSAA
Trigger: GGCGGCGCTCAGGGCCACGCAGGAGGAGTTGCAGCG...GCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp TTAAGTCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCGCTGCAACTCCTCCTaGGTGGCCCTGAGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: LSLSTGMGEDQGRSRLAIRCNSS*VALSAA
Trigger: GGCGGCGCTCAGGGCCACGCAGGAGGAGTTGCAGCG...GATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGACTTAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp AGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCAGGCCGAGTCAGCGTTaGTCGAGGTCCCCACCGGCT +
Preference number: 4 (lower is better)
Translates to: SLRSPFSHGASSLFAKGARPSQR*SRSPPA
Trigger: AGCCGGTGGGGACCTCGAGCAACGCTGACTCGGCCT...GGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp GAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCAGGCCGAGTCAGCGTTaGTCGAGGTCCCCACCGGCT +
Preference number: 4 (lower is better)
Translates to: ESEESVLPRGLVTLCEGRRPSQR*SRSPPA
Trigger: AGCCGGTGGGGACCTCGAGCAACGCTGACTCGGCCT...GCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp GAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCAACTTCCCGCTCCGCCTaGAGAACCGCCAGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: EESVLPRGLVTLCEGRLATSRSA*RTARSG
Trigger: TCCTGACCTGGCGGTTCTGCAGGCGGAGCGGGAAGT...TGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp CGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTAGGGGTCGGCGATGTTaGCGCGCAGCCGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RYWGESEESVLPRGLVTLRGRRC*RAAGPA
Trigger: TGCTGGCCCGGCTGCGCGGCAACATCGCCGACCCCT...AAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp GAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCAGTGGTGGAGGAGGAGTaGTGTTCAGGCTGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: EESVLPRGLVTLCEGRLAVVEEE*CSGCGQ
Trigger: CTGCCCGCAGCCTGAACAGCACTCCTCCTCCACCAC...TGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR GCA 90 bp AGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCAGTGCAGCGAGAAAAGCTaGGCCCCGGTCAGCACACCC +
Preference number: 4 (lower is better)
Translates to: RSPFSHGASSLFAKGAWQCSEKS*APVSTP
Trigger: GGGTGTGCTGACCGGGGCGCAGCTTTTCTCGCTGCA...CTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR GCA 90 bp ATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGGCGGCCGCCGCACACTaGTCGCGAACCCCACCTCGT +
Preference number: 4 (lower is better)
Translates to: IGESLRSPFSHGASSLFAAAAAH*SRTPPR
Trigger: ACGAGGTGGGGTTCGCGAGCAGTGTGCGGCGGCCGC...CGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588359.5
CDS-3UTR CCA 90 bp AGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCAGGCCCAGACTCGGCCCTaGCTATCCATGACGGCCAAC +
Preference number: 4 (lower is better)
Translates to: RSPFSHGASSLFAKGAWQAQTRP*LSMTAN
Trigger: GTTGGCCGTCATGGATAGCCAGGGCCGAGTCTGGGC...CTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp GGATCGTTAAGTCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCAGGGCTTTGGCTGTaGTGCAGCCGGGGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: GSLSLSTGMGEDQGRSRLAGLWL*CSRGPG
Trigger: CCCCGGACCCCGGCTGCACCACAGCCAAAGCCCTGC...CAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGACTTAACGATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR CCA 90 bp GGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCTGCGGGCAGGGCTTTaGCTGTGGTGCAGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: GESEESVLPRGLVTLCEGLRAGL*LWCSRG
Trigger: ACCCCGGCTGCACCACAGCCAAAGCCCTGCCCGCAG...CCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR CCA 90 bp AGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCGTCTGTCCACCGGGATaGGGGAAGACCAGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: SLRSPFSHGASSLFAKGAVCPPG*GKTRAG
Trigger: TCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGAC...GGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp TCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCACCCTGCTGTGTCGCTTaGGTCACCTGCCGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: SVHRDGGRPGPEQIGHPSPCCVA*VTCRRL
Trigger: GAGGCGCCGGCAGGTGACCCAAGCGACACAGCAGGG...TGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586329.5
CDS-3UTR CCA 90 bp GGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGCCCTGCTGTGTCGCTTaGGTCACCTGCCGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: GESLRSPFSHGASSLFAKPCCVA*VTCRRL
Trigger: GAGGCGCCGGCAGGTGACCCAAGCGACACAGCAGGG...CTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586329.5
ENST00000588359.5
CDS-3UTR TCA 90 bp ACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGATCACTGCGCGGACTaGCGGGCGGCGCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: TRAGADWPSFRRSTSAIGDHCAD*RAALQG
Trigger: CCCCTGCAGCGCCGCCCGTCAGTCCGCGCAGTGATC...CCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR TCA 90 bp GAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCACGTTTTCACGTGGAGTaGCGTTGTCCCGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: EESVLPRGLVTLCEGRLARFHVE*RCPAAA
Trigger: CGCTGCTGCGGGACAACGTCACTCCACGTGAAAACG...TGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR TCA 90 bp AGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCAGCGTTTTCACGTGGAGTaGCGTTGTCCCGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: RSPFSHGASSLFAKGAWQRFHVE*RCPAAA
Trigger: CGCTGCTGCGGGACAACGTCACTCCACGTGAAAACG...CTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR TCA 90 bp GGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCAGGGTCTCTGACTCCAGCTaGGGCTCAGATTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: GVRSPTGPRHSLRRAPGRVSDSS*GSDSGS
Trigger: GGAGCCAGAATCTGAGCCTCAGCTGGAGTCAGAGAC...CCTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR TCA 90 bp CTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGGTACGTCCCGCTGCTTaGCCGACAGCTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: LRSPFSHGASSLFAKGAWVRPAA*PTAHCC
Trigger: ACAGCAGTGAGCTGTCGGTCAAGCAGCGGGACGTAC...CCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR TCA 90 bp GGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCAGGCTATTGGGGAGAGTCTaGGGAGTCCGTTCTCCCACG +
Preference number: 4 (lower is better)
Translates to: GVRSPTGPRHSLRRAPGRLLGRV*GVRSPT
Trigger: CGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAG...CCTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR GCA 90 bp TCTCGGGGGTCTGCTAGCGCTTTCCGTAGACTGTCTCCACGCCCTCCCCACTCCCTGAGTGGTAGCTCCTaGCCACCTGGAGGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: SRGSASAFRRLSPRPPHSLSGSS*PPGGAL
Trigger: CAGGGCACCTCCAGGTGGGCAGGAGCTACCACTCAG...GGAGTGGGGAGGGCGTGGAGACAGTCTACGGAAAGCGCTAGCAGACCCCCGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000201647.11
CDS-3UTR GCA 90 bp AGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCAGGCATCCTCCACGGTATaGACGCCATCGTCCTCACCC +
Preference number: 4 (lower is better)
Translates to: RSPFSHGASSLFAKGAWQASSTV*TPSSSP
Trigger: GGGTGAGGACGATGGCGTGCATACCGTGGAGGATGC...CTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp ACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGCAACGAGCGGCTCCTaGCGGGTGGCATCACCGCGT +
Preference number: 4 (lower is better)
Translates to: TGMGEDQGRSRLAILQKIATSGS*RVASPR
Trigger: ACGCGGTGATGCCACCCGGCAGGAGCCGCTCGTTGC...GATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp TGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAAAGTGCACGTCGGGCTaGGCGCGCTCGGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: WGESEESVLPRGLVTLCEKCTSG*ARSGSW
Trigger: CCAGGAACCCGAGCGCGCGCAGCCCGACGTGCACTT...TTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp CGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTAAGTGCACGTCGGGCTaGGCGCGCTCGGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: RYWGESEESVLPRGLVTLKCTSG*ARSGSW
Trigger: CCAGGAACCCGAGCGCGCGCAGCCCGACGTGCACTT...AAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp GGATCGTTAAGTCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGAGGCCCTGGAAGAAGTaGACGTCGGGCTGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: GSLSLSTGMGEDQGRSRLRPWKK*TSGCAR
Trigger: GCGCGCGCAGCCCGACGTGCACTTCTTCCAGGGCCT...CAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGACTTAACGATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp TCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCACCGGGCGCTGCAACTCCTCCTaGGTGGCCCTGAGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: SRSSPEGLQQGSLSLSTGRCNSS*VALSAA
Trigger: GGCGGCGCTCAGGGCCACGCAGGAGGAGTTGCAGCG...CCCGGTGGACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp GCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGGCGAGCGGTCGCGCTaGAACTCCTCCTGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: AIGESLRSPFSHGASSLFGERSR*NSSCVA
Trigger: GGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC...AAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp TCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCACCGGGGGCGAGCGGTCGCGCTaGAACTCCTCCTGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: SRSSPEGLQQGSLSLSTGGERSR*NSSCVA
Trigger: GGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC...CCCGGTGGACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp GGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCAGGGCCTCCGCCGACTTCTaGAGCCTCGATACAAAGCTC +
Preference number: 4 (lower is better)
Translates to: GVRSPTGPRHSLRRAPGRASADF*SLDTKL
Trigger: GAGCTTTGTATCGAGGCTGCAGAAGTCGGCGGAGGC...CCTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp TCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCATCCGATGTCAGATaGGGCCGCCGCACACTGCTC +
Preference number: 4 (lower is better)
Translates to: SEESVLPRGLVTLCEGRLASDVR*GRRTLL
Trigger: GAGCAGTGTGCGGCGGCCGCATCTGACATCGGATGC...CAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR GCA 90 bp GGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCCCAGGCGCGGCTCTaGGGGTCAGTGACCGGCGGC +
Preference number: 4 (lower is better)
Translates to: GRSRLAILQKIDFRYWGESQARL*GSVTGG
Trigger: GCCGCCGGTCACTGACCCGCAGAGCCGCGCCTGGGA...CTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp ATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCTCCCAGGCGCGGCTCTaGGGGTCAGTGACCGGCGGC +
Preference number: 4 (lower is better)
Translates to: MGEDQGRSRLAILQKIDFSQARL*GSVTGG
Trigger: GCCGCCGGTCACTGACCCGCAGAGCCGCGCCTGGGA...GAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp GAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCCTGGCTGTACACACGTaGCCCCTCCTCGGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: ESLRSPFSHGASSLFAKGLAVHT*PLLGAH
Trigger: GTGAGCCCCGAGGAGGGGGCACGTGTGTACAGCCAG...GCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR GCA 90 bp GAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCTCCAGCAGCGAGCGCTaGACGGTGACCTGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: ESEESVLPRGLVTLCEGRSSSER*TVTWLY
Trigger: GTACAGCCAGGTCACCGTGCAGCGCTCGCTGCTGGA...GCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR GCA 90 bp CCACTGCACCCTCTCGGGGGTCTGCTAGCGCTTTCCGTAGACTGTCTCCACGCCGGCCTCGTCACTCTTTaGGAAGGGCGCCTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: PLHPLGGLLALSVDCLHAGLVTL*EGRLAG
Trigger: ACCTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCC...GGCGTGGAGACAGTCTACGGAAAGCGCTAGCAGACCCCCGAGAGGGTGCAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000586329.5
CDS-3UTR GCA 90 bp CCACTGCACCCTCTCGGGGGTCTGCTAGCGCTTTCCGTAGACTGTCTCCACGCCCCGCCTCGTCCTGGCTaGTCCCCCAGATCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: PLHPLGGLLALSVDCLHAPPRPG*SPRSFL
Trigger: CAAGAAGGATCTGGGGGAGCAGCCAGGACGAGGCGG...GGCGTGGAGACAGTCTACGGAAAGCGCTAGCAGACCCCCGAGAGGGTGCAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000245618.5
CDS-3UTR GCA 90 bp AGTCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTTCCCAGCCTCGGCCCTaGTGTGTCGCTTGGGTCACC +
Preference number: 4 (lower is better)
Translates to: SLSTGMGEDQGRSRLAILSQPRP*CVAWVT
Trigger: GGTGACCCAAGCGACACAGCAGGGCCGAGGCTGGGA...AAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586329.5
CDS-3UTR GCA 90 bp TCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGGACACGAGGGGCTCTaGCAAGGCCAGGAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SVHRDGGRPGPEQIGHPSGHEGL*QGQERL
Trigger: CAGCCTCTCCTGGCCTTGGCAGAGCCCCTCGTGTCC...TGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586329.5
CDS-3UTR CCA 90 bp TCTCGGGGGTCTGCTAGCGCTTTCCGTAGACTGTCTCCACGCCCTCCCCACTCCCACGATGGCGCCCAGTaGGTACGACTCCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SRGSASAFRRLSPRPPHSHDGAQ*VRLQLL
Trigger: GAGGAGCTGGAGTCGTACCCACTGGGCGCCATCGTG...GGAGTGGGGAGGGCGTGGAGACAGTCTACGGAAAGCGCTAGCAGACCCCCGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000201647.11
ENST00000586329.5
CDS-3UTR CCA 90 bp AGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGGGAATGGGCTTCGCCTaGGGTCGTCCGCGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: RAGADWPSFRRSTSAIGEGMGFA*GRPRPA
Trigger: CGCGGGCCGCGGACGACCCCAGGCGAAGCCCATTCC...CTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp AGCCAGTCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCGGAATGGGCTTCGCCTaGGGTCGTCCGCGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: SQSRSSPEGLQQGSLSLSGMGFA*GRPRPA
Trigger: CGCGGGCCGCGGACGACCCCAGGCGAAGCCCATTCC...GGACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGACTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp CAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGGAATGGGCTTCGCCTaGGGTCGTCCGCGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: QGRSRLAILQKIDFRYWGGMGFA*GRPRPA
Trigger: CGCGGGCCGCGGACGACCCCAGGCGAAGCCCATTCC...TCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp AGTCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCCTCTGCCTCGGGAATaGGCTTCGCCTGGGGTCGTC +
Preference number: 4 (lower is better)
Translates to: SLSTGMGEDQGRSRLAILPLPRE*ASPGVV
Trigger: GACGACCCCAGGCGAAGCCCATTCCCGAGGCAGAGG...AAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp CCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGCCTCCGAGGGCGGCTTaGCCCGCAGCGTCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: PGPEQIGHPSEDRLPLLGPPRAA*PAASAS
Trigger: GCTTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGG...CCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp AGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCGAACTCGGGTCTGTATaGGGGTCCCTCCTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: SLRSPFSHGASSLFAKGAELGSV*GSLLRG
Trigger: TCCCCGGAGGAGGGACCCCCATACAGACCCGAGTTC...GGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR CCA 90 bp AGTCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTTCCCTCCTGCCCCGCTaGGTCCCGAACCTTCCACCA +
Preference number: 4 (lower is better)
Translates to: SLSTGMGEDQGRSRLAILSLLPR*VPNLPP
Trigger: TGGTGGAAGGTTCGGGACCCAGCGGGGCAGGAGGGA...AAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR CCA 90 bp TCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCATCCCTCCTGCCCCGCTaGGTCCCGAACCTTCCACCA +
Preference number: 4 (lower is better)
Translates to: SVHRDGGRPGPEQIGHPSSLLPR*VPNLPP
Trigger: TGGTGGAAGGTTCGGGACCCAGCGGGGCAGGAGGGA...TGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR CCA 90 bp ATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGCTGCGGGCAGGGCTTTaGCTGTGGTGCAGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: IGESLRSPFSHGASSLFALRAGL*LWCSRG
Trigger: ACCCCGGCTGCACCACAGCCAAAGCCCTGCCCGCAG...CGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR CCA 90 bp TCCACTGCACCCTCTCGGGGGTCTGCTAGCGCTTTCCGTAGACTGTCTCCACGCGTCTGTCCACCGGGATaGGGGAAGACCAGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: STAPSRGSASAFRRLSPRVCPPG*GKTRAG
Trigger: TCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGAC...GCGTGGAGACAGTCTACGGAAAGCGCTAGCAGACCCCCGAGAGGGTGCAGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000586329.5
CDS-3UTR CCA 90 bp CTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGAACCCCACCTCGTCCTaGCTGCTCCCCCAGATCCTT +
Preference number: 4 (lower is better)
Translates to: LRSPFSHGASSLFAKGAWNPTSS*LLPQIL
Trigger: AAGGATCTGGGGGAGCAGCCAGGACGAGGTGGGGTT...CCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588359.5
CDS-3UTR TCA 90 bp GAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCCGGTGCTCATGGTGCTaGGTGGTAGCTCCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: ESLRSPFSHGASSLFAKGRCSWC*VVAPAH
Trigger: GTGGGCAGGAGCTACCACTCAGCACCATGAGCACCG...GCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000201647.11
ENST00000540810.5
CDS-3UTR TCA 90 bp CGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTCCGGGTCGAGCAGCGTaGCATGGTCGGGAGACACTC +
Preference number: 4 (lower is better)
Translates to: RYWGESEESVLPRGLVTLPGRAA*HGRETL
Trigger: GAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGG...AAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR TCA 90 bp GGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCCGGGTCGAGCAGCGTaGCATGGTCGGGAGACACTC +
Preference number: 4 (lower is better)
Translates to: GGRPGPEQIGHPSEDRLPPGRAA*HGRETL
Trigger: GAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGG...CGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR TCA 90 bp TCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGCGTTTTCACGTGGAGTaGCGTTGTCCCGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: SEESVLPRGLVTLCEGRLRFHVE*RCPAAA
Trigger: CGCTGCTGCGGGACAACGTCACTCCACGTGAAAACG...CAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR TCA 90 bp GGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGGCGGCTCCCAGCCGCTaGAGAACTCGGGTCTGTATG +
Preference number: 4 (lower is better)
Translates to: GESEESVLPRGLVTLCEGAAPSR*RTRVCM
Trigger: CATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGC...CCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR TCA 90 bp GAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCAGTCTCTGACTCCAGCTaGGGCTCAGATTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: EESVLPRGLVTLCEGRLAVSDSS*GSDSGS
Trigger: GGAGCCAGAATCTGAGCCTCAGCTGGAGTCAGAGAC...TGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR TCA 90 bp AGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCAGGTCTCTGACTCCAGCTaGGGCTCAGATTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: RSPFSHGASSLFAKGAWQVSDSS*GSDSGS
Trigger: GGAGCCAGAATCTGAGCCTCAGCTGGAGTCAGAGAC...CTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR TCA 90 bp TGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGCGAGCGCTGCACGGTaGCCTGGCTGTACACACGTG +
Preference number: 4 (lower is better)
Translates to: WGESEESVLPRGLVTLCEASAAR*PGCTHV
Trigger: CACGTGTGTACAGCCAGGTCACCGTGCAGCGCTCGC...TTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR GCA 90 bp CAGTCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCACCAGGGGTCGGCGATGTTaGCGCGCAGCCGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: QSRSSPEGLQQGSLSLSTRGRRC*RAAGPA
Trigger: TGCTGGCCCGGCTGCGCGGCAACATCGCCGACCCCT...GGTGGACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp GAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCACGGCGCCTCCGCTCGTaGTGTAGCTGTTTCTCAACT +
Preference number: 4 (lower is better)
Translates to: EESVLPRGLVTLCEGRLARRLRS*CSCFST
Trigger: AGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCG...TGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR GCA 90 bp CTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGTCCAGTACGTCCCGCTaGTTGACCGACAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LRSPFSHGASSLFAKGAWSSTSR*LTDSSL
Trigger: CAGTGAGCTGTCGGTCAAGCAGCGGGACGTACTGGA...CCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR GCA 90 bp GAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGTGGTGGAGGAGGAGTaGTGTTCAGGCTGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: ESLRSPFSHGASSLFAKGVVEEE*CSGCGQ
Trigger: CTGCCCGCAGCCTGAACAGCACTCCTCCTCCACCAC...GCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR GCA 90 bp GGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGTGGGCCAGGCGCGCCTaGAGTTCCTCGTTGACGATG +
Preference number: 4 (lower is better)
Translates to: GESLRSPFSHGASSLFAKWARRA*SSSLTM
Trigger: CATCGTCAACGAGGAACTGCAGGCGCGCCTGGCCCA...CTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR GCA 90 bp ATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGCTGGCTGTACACACGTaGCCCCTCCTCGGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: IGESLRSPFSHGASSLFALAVHT*PLLGAH
Trigger: GTGAGCCCCGAGGAGGGGGCACGTGTGTACAGCCAG...CGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR GCA 90 bp TCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGTCCAGCAGCGAGCGCTaGACGGTGACCTGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: STGMGEDQGRSRLAILQKSSSER*TVTWLY
Trigger: GTACAGCCAGGTCACCGTGCAGCGCTCGCTGCTGGA...CTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR GCA 90 bp TCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCATCCAGCAGCGAGCGCTaGACGGTGACCTGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: SVHRDGGRPGPEQIGHPSSSSER*TVTWLY
Trigger: GTACAGCCAGGTCACCGTGCAGCGCTCGCTGCTGGA...TGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR GCA 90 bp GGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGGGCCTCGTCACTCTTTaGGAAGGGCGCCTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GESEESVLPRGLVTLCEGGLVTL*EGRLAG
Trigger: ACCTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCC...CCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR GCA 90 bp AGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCCCACCTCGTCCTGGCTaGTCCCCCAGATCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SLRSPFSHGASSLFAKGAPPRPG*SPRSFL
Trigger: CAAGAAGGATCTGGGGGAGCAGCCAGGACGAGGTGG...GGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588359.5
CDS-3UTR CCA 90 bp GGATCGTTAAGTCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGACTCCAGCTCCTCCTTaGAGGCCGGGTCGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: GSLSLSTGMGEDQGRSRLTPAPP*RPGRAA
Trigger: CGCTGCTCGACCCGGCCTCCAAGGAGGAGCTGGAGT...CAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGACTTAACGATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp GGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCACTCCAGCTCCTCCTTaGAGGCCGGGTCGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: GEDQGRSRLAILQKIDFRTPAPP*RPGRAA
Trigger: CGCTGCTCGACCCGGCCTCCAAGGAGGAGCTGGAGT...GCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp AGGATCGTTAAGTCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTCCGAGGCGCAGGCCCTaGAAGAAGTGCACGTCGGGC +
Preference number: 4 (lower is better)
Translates to: RIVKSVHRDGGRPGPEQIPRRRP*KKCTSG
Trigger: GCCCGACGTGCACTTCTTCCAGGGCCTGCGCCTCGG...AATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGACTTAACGATCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp AGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCAGTTGTGCAGAGCCCCCTaGATGTCCTCTCGGATCAGC +
Preference number: 4 (lower is better)
Translates to: RSPFSHGASSLFAKGAWQLCRAP*MSSRIS
Trigger: GCTGATCCGAGAGGACATCCAGGGGGCTCTGCACAA...CTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp TCCAGCCTCACTGCTTTGTTTTCGTCTCCTCCCACGTTGCTTCCCTCCAGTCTGGGAATGGGCTTCGCCTaGGGTCGTCCGCGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: SSLTALFSSPPTLLPSSLGMGFA*GRPRPA
Trigger: CGCGGGCCGCGGACGACCCCAGGCGAAGCCCATTCC...CAGACTGGAGGGAAGCAACGTGGGAGGAGACGAAAACAAAGCAGTGAGGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CCA 90 bp GGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCCCTCTGCCTCGGGAATaGGCTTCGCCTGGGGTCGTC +
Preference number: 4 (lower is better)
Translates to: GEDQGRSRLAILQKIDFRPLPRE*ASPGVV
Trigger: GACGACCCCAGGCGAAGCCCATTCCCGAGGCAGAGG...GCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp CAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGACCTCCGAGGGCGGCTTaGCCCGCAGCGTCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: QGRSRLAILQKIDFRYWGPPRAA*PAASAS
Trigger: GCTTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGG...TCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp GGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCCATTGACAGCGACCTaGGGGGCGCTTTGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: GGRPGPEQIGHPSEDRLPPLTAT*GALCCR
Trigger: CCGGCAGCAAAGCGCCCCCCAGGTCGCTGTCAATGG...CGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR CCA 90 bp GGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCAGGCTGAGGCTCAGATTCTaGCTCCAAGTCTCGGTGACC +
Preference number: 4 (lower is better)
Translates to: GVRSPTGPRHSLRRAPGRLRLRF*LQVSVT
Trigger: GGTCACCGAGACTTGGAGCCAGAATCTGAGCCTCAG...CCTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR CCA 90 bp AGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCAGGGCTTTGGCTGTaGTGCAGCCGGGGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: RRSTSAIGESLRSPFSHGAGLWL*CSRGPG
Trigger: CCCCGGACCCCGGCTGCACCACAGCCAAAGCCCTGC...CCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR CCA 90 bp TGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAACGCTGCACGGTGACCTaGCTGTACACACGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: WGESEESVLPRGLVTLCERCTVT*LYTRAP
Trigger: GGGGGCACGTGTGTACAGCCAGGTCACCGTGCAGCG...TTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR CCA 90 bp GGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGGTCTGTCCACCGGGATaGGGGAAGACCAGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: GGRPGPEQIGHPSEDRLPVCPPG*GKTRAG
Trigger: TCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGAC...CGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR TCA 90 bp AAGAGTTTAATCGTCCAGCCTTTACCCCTCTCGGGGGCCCAGAGATACTACCACGATCACTGCGCGGACTaGCGGGCGGCGCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: KSLIVQPLPLSGAQRYYHDHCAD*RAALQG
Trigger: CCCCTGCAGCGCCGCCCGTCAGTCCGCGCAGTGATC...GTGGTAGTATCTCTGGGCCCCCGAGAGGGGTAAAGGCTGGACGATTAAACTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR TCA 90 bp TATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCCCCGCTCTACGGTGCTaGTCACTGCGCGGACTGACG +
Preference number: 4 (lower is better)
Translates to: YWGESEESVLPRGLVTLCPALRC*SLRGLT
Trigger: CGTCAGTCCGCGCAGTGATCAGCACCGTAGAGCGGG...GCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR TCA 90 bp AGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCGTCTCTGACTCCAGCTaGGGCTCAGATTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SLRSPFSHGASSLFAKGAVSDSS*GSDSGS
Trigger: GGAGCCAGAATCTGAGCCTCAGCTGGAGTCAGAGAC...GGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR TCA 90 bp GGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCAGGTTTTCCTGCTGTCTCTaGCTCCAGCTGAGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: GVRSPTGPRHSLRRAPGRFSCCL*LQLRLR
Trigger: TCTGAGCCTCAGCTGGAGTCAGAGACAGCAGGAAAA...CCTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR TCA 90 bp GGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGTGGGGTCCAAGCCGTTaGGGCTATCGCAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: GGRPGPEQIGHPSEDRLPWGPSR*GYRSCP
Trigger: GGGACAGCTGCGATAGCCTCAACGGCTTGGACCCCA...CGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR TCA 90 bp GCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAGCGCTGCACGGTaGCCTGGCTGTACACACGTG +
Preference number: 4 (lower is better)
Translates to: AIGESLRSPFSHGASSLFASAAR*PGCTHV
Trigger: CACGTGTGTACAGCCAGGTCACCGTGCAGCGCTCGC...AAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR TCA 90 bp GAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCGCCTGGCAGGTCAAATaGCCTCCATTTCCACCTCGC +
Preference number: 4 (lower is better)
Translates to: ESEESVLPRGLVTLCEGRAWQVK*PPFPPR
Trigger: GCGAGGTGGAAATGGAGGTCATTTGACCTGCCAGGC...GCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR GCA 90 bp ACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCTGCCTGCTCAGGCTCTaGCCTGCTCTCCGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: TGMGEDQGRSRLAILQKICLLRL*PALRCP
Trigger: AGGACAGCGGAGAGCAGGGCAGAGCCTGAGCAGGCA...GATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000201647.11
CDS-3UTR GCA 90 bp GCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTTGGAGGTGCCCTGCCTaGTCAGGCTCTGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: AIGESLRSPFSHGASSLFWRCPA*SGSALL
Trigger: GAGCAGGGCAGAGCCTGAGCAGGCAGGGCACCTCCA...AAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000201647.11
CDS-3UTR GCA 90 bp AGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGAGGCCCTGGAAGAAGTaGACGTCGGGCTGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: RRSTSAIGESLRSPFSHGRPWKK*TSGCAR
Trigger: GCGCGCGCAGCCCGACGTGCACTTCTTCCAGGGCCT...CCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp GCTGTTTATAGGCTGGGCCGCATATTACAATGCTCAGGGCTCCACTGCACCCTCCGCTGCAACTCCTCCTaGGTGGCCCTGAGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: AVYRLGRILQCSGLHCTLRCNSS*VALSAA
Trigger: GGCGGCGCTCAGGGCCACGCAGGAGGAGTTGCAGCG...GAGGGTGCAGTGGAGCCCTGAGCATTGTAATATGCGGCCCAGCCTATAAACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000586329.5
CDS-3UTR GCA 90 bp GCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTAGGCCGAGTCAGCGTTaGTCGAGGTCCCCACCGGCT +
Preference number: 4 (lower is better)
Translates to: AIGESLRSPFSHGASSLFRPSQR*SRSPPA
Trigger: AGCCGGTGGGGACCTCGAGCAACGCTGACTCGGCCT...AAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp TGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAACTTCCCGCTCCGCCTaGAGAACCGCCAGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: WGESEESVLPRGLVTLCETSRSA*RTARSG
Trigger: TCCTGACCTGGCGGTTCTGCAGGCGGAGCGGGAAGT...TTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp CCACTGCACCCTCTCGGGGGTCTGCTAGCGCTTTCCGTAGACTGTCTCCACGCCGCCTCCGCCGACTTCTaGAGCCTCGATACAAAGCTC +
Preference number: 4 (lower is better)
Translates to: PLHPLGGLLALSVDCLHAASADF*SLDTKL
Trigger: GAGCTTTGTATCGAGGCTGCAGAAGTCGGCGGAGGC...GGCGTGGAGACAGTCTACGGAAAGCGCTAGCAGACCCCCGAGAGGGTGCAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000586329.5
CDS-3UTR GCA 90 bp GAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCGGCCCGAAAAGGAAGTaGAACAGCTCCGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: ESEESVLPRGLVTLCEGRGPKRK*NSSGEE
Trigger: CTCCTCTCCGGAGCTGTTGCACTTCCTTTTCGGGCC...GCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp ACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGCATCCGATGTCAGATaGGGCCGCCGCACACTGCTC +
Preference number: 4 (lower is better)
Translates to: TGMGEDQGRSRLAILQKIASDVR*GRRTLL
Trigger: GAGCAGTGTGCGGCGGCCGCATCTGACATCGGATGC...GATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp TGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGTGGTGGAGGAGGAGTaGTGTTCAGGCTGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: WGESEESVLPRGLVTLCEVVEEE*CSGCGQ
Trigger: CTGCCCGCAGCCTGAACAGCACTCCTCCTCCACCAC...TTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR GCA 90 bp TTAAGTCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCTGGGCCAGGCGCGCCTaGAGTTCCTCGTTGACGATG +
Preference number: 4 (lower is better)
Translates to: LSLSTGMGEDQGRSRLAIWARRA*SSSLTM
Trigger: CATCGTCAACGAGGAACTGCAGGCGCGCCTGGCCCA...GATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGACTTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR GCA 90 bp GGATCGTTAAGTCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGTGGGCCAGGCGCGCCTaGAGTTCCTCGTTGACGATG +
Preference number: 4 (lower is better)
Translates to: GSLSLSTGMGEDQGRSRLWARRA*SSSLTM
Trigger: CATCGTCAACGAGGAACTGCAGGCGCGCCTGGCCCA...CAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGACTTAACGATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR GCA 90 bp CGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGGGCCAGGCGCGCCTaGAGTTCCTCGTTGACGATG +
Preference number: 4 (lower is better)
Translates to: RYWGESEESVLPRGLVTLWARRA*SSSLTM
Trigger: CATCGTCAACGAGGAACTGCAGGCGCGCCTGGCCCA...AAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR GCA 90 bp ATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGTGCAGCGAGAAAAGCTaGGCCCCGGTCAGCACACCC +
Preference number: 4 (lower is better)
Translates to: IGESLRSPFSHGASSLFACSEKS*APVSTP
Trigger: GGGTGTGCTGACCGGGGCGCAGCTTTTCTCGCTGCA...CGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR GCA 90 bp TATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCCTGGCTGTACACACGTaGCCCCTCCTCGGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: YWGESEESVLPRGLVTLCLAVHT*PLLGAH
Trigger: GTGAGCCCCGAGGAGGGGGCACGTGTGTACAGCCAG...GCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR GCA 90 bp ACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCTCCAGCAGCGAGCGCTaGACGGTGACCTGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: TGMGEDQGRSRLAILQKISSSER*TVTWLY
Trigger: GTACAGCCAGGTCACCGTGCAGCGCTCGCTGCTGGA...GATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR GCA 90 bp TCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCACAGAACGTCACCAGGTaGCTGTGGCGGTGCTCATGG +
Preference number: 4 (lower is better)
Translates to: SVHRDGGRPGPEQIGHPSQNVTR*LWRCSW
Trigger: CCATGAGCACCGCCACAGGCACCTGGTGACGTTCTG...TGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540810.5
CDS-3UTR GCA 90 bp GCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTTCCCAGCCTCGGCCCTaGTGTGTCGCTTGGGTCACC +
Preference number: 4 (lower is better)
Translates to: AIGESLRSPFSHGASSLFSQPRP*CVAWVT
Trigger: GGTGACCCAAGCGACACAGCAGGGCCGAGGCTGGGA...AAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000586329.5
ENST00000588359.5
CDS-3UTR CCA 90 bp AGTCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTTCGAGCAGCGTGACATaGTCGGGAGACACTCGCAGC +
Preference number: 4 (lower is better)
Translates to: SLSTGMGEDQGRSRLAILSSSVT*SGDTRS
Trigger: GCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGA...AAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp GCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTCCTCTGCCTCGGGAATaGGCTTCGCCTGGGGTCGTC +
Preference number: 4 (lower is better)
Translates to: AIGESLRSPFSHGASSLFPLPRE*ASPGVV
Trigger: GACGACCCCAGGCGAAGCCCATTCCCGAGGCAGAGG...AAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp ATGGTGCTTCCCAGGCCCTGGGAAAACAAACTGGCTTCTTCCAGCCTTTTGGGGCCTCCGAGGGCGGCTTaGCCCGCAGCGTCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: MVLPRPWENKLASSSLLGPPRAA*PAASAS
Trigger: GCTTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGG...CCCCAAAAGGCTGGAAGAAGCCAGTTTGTTTTCCCAGGGCCTGGGAAGCACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CCA 90 bp GGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCGAACTCGGGTCTGTATaGGGGTCCCTCCTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: GEDQGRSRLAILQKIDFRELGSV*GSLLRG
Trigger: TCCCCGGAGGAGGGACCCCCATACAGACCCGAGTTC...GCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp ATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGGAACTCGGGTCTGTATaGGGGTCCCTCCTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: IGESLRSPFSHGASSLFAELGSV*GSLLRG
Trigger: TCCCCGGAGGAGGGACCCCCATACAGACCCGAGTTC...CGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR CCA 90 bp CTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCTGAGGCTCAGATTCTaGCTCCAAGTCTCGGTGACC +
Preference number: 4 (lower is better)
Translates to: LRSPFSHGASSLFAKGAWLRLRF*LQVSVT
Trigger: GGTCACCGAGACTTGGAGCCAGAATCTGAGCCTCAG...CCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR CCA 90 bp TCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCACCGGGTCCCTCCTGCCCCGCTaGGTCCCGAACCTTCCACCA +
Preference number: 4 (lower is better)
Translates to: SRSSPEGLQQGSLSLSTGSLLPR*VPNLPP
Trigger: TGGTGGAAGGTTCGGGACCCAGCGGGGCAGGAGGGA...CCCGGTGGACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR CCA 90 bp GCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTTCCCTCCTGCCCCGCTaGGTCCCGAACCTTCCACCA +
Preference number: 4 (lower is better)
Translates to: AIGESLRSPFSHGASSLFSLLPR*VPNLPP
Trigger: TGGTGGAAGGTTCGGGACCCAGCGGGGCAGGAGGGA...AAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR CCA 90 bp GTCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCACCGGCGCTGCACGGTGACCTaGCTGTACACACGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: VQILSGGTAARIVKSVHRRCTVT*LYTRAP
Trigger: GGGGGCACGTGTGTACAGCCAGGTCACCGTGCAGCG...CCGGTGGACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR CCA 90 bp GCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTCGCTGCACGGTGACCTaGCTGTACACACGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: AIGESLRSPFSHGASSLFRCTVT*LYTRAP
Trigger: GGGGGCACGTGTGTACAGCCAGGTCACCGTGCAGCG...AAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR CCA 90 bp GGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCAGGATCGACTTCCGCTATTaGGGAGAGTCTGAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: GVRSPTGPRHSLRRAPGRIDFRY*GESEES
Trigger: GGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGAT...CCTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp CTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGAGGGCCGGAGCAGATTaGCCATCCTTCAGAAGATCG +
Preference number: 4 (lower is better)
Translates to: LRSPFSHGASSLFAKGAWRAGAD*PSFRRS
Trigger: CGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCT...CCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR TCA 90 bp AGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGATCACTGCGCGGACTaGCGGGCGGCGCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SRLAILQKIDFRYWGESEDHCAD*RAALQG
Trigger: CCCCTGCAGCGCCGCCCGTCAGTCCGCGCAGTGATC...CTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR TCA 90 bp AGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGCCCGCTCTACGGTGCTaGTCACTGCGCGGACTGACG +
Preference number: 4 (lower is better)
Translates to: RAGADWPSFRRSTSAIGEPALRC*SLRGLT
Trigger: CGTCAGTCCGCGCAGTGATCAGCACCGTAGAGCGGG...CTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR TCA 90 bp TGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAACGTTTTCACGTGGAGTaGCGTTGTCCCGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: WGESEESVLPRGLVTLCERFHVE*RCPAAA
Trigger: CGCTGCTGCGGGACAACGTCACTCCACGTGAAAACG...TTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR TCA 90 bp CCAGGATCCCAAGCACCAGACTTGGGCTCTTCTTCAAAACCCAAAGGTCCAATTGGCTCTGCGGGTCAGTaGCCGGCGGCTCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PGSQAPDLGSSSKPKGPIGSAGQ*PAAPSR
Trigger: GCGGCTGGGAGCCGCCGGTCACTGACCCGCAGAGCC...AATTGGACCTTTGGGTTTTGAAGAAGAGCCCAAGTCTGGTGCTTGGGATCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR TCA 90 bp TGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGTACGTCCCGCTGCTTaGCCGACAGCTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: WGESEESVLPRGLVTLCEVRPAA*PTAHCC
Trigger: ACAGCAGTGAGCTGTCGGTCAAGCAGCGGGACGTAC...TTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR TCA 90 bp ACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGTACGTCCCGCTGCTTaGCCGACAGCTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: TGMGEDQGRSRLAILQKIVRPAA*PTAHCC
Trigger: ACAGCAGTGAGCTGTCGGTCAAGCAGCGGGACGTAC...GATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR TCA 90 bp AAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCTGGGGTCCAAGCCGTTaGGGCTATCGCAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: KIDFRYWGESEESVLPRGWGPSR*GYRSCP
Trigger: GGGACAGCTGCGATAGCCTCAACGGCTTGGACCCCA...GCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR TCA 90 bp TCCCAGCCAGTCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGCGAGCGCTGCACGGTaGCCTGGCTGTACACACGTG +
Preference number: 4 (lower is better)
Translates to: SQPVQILSGGTAARIVKSASAAR*PGCTHV
Trigger: CACGTGTGTACAGCCAGGTCACCGTGCAGCGCTCGC...AGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGACTGGCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR TCA 90 bp AGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCAGCACTGCCTCCAGCTCTaGCACTTTCTCTTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: RSPFSHGASSLFAKGAWQHCLQL*HFLFVL
Trigger: GAGGACAAAGAGAAAGTGTCAGAGCTGGAGGCAGTG...CTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR TCA 90 bp GTCTCCAGGATCCCAAGCACCAGACTTGGGCTCTTCTTCAAAACCCAAAGGTCCGCACGCTGTCCCTGCTaGGACCCTCTGCTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: VSRIPSTRLGLFFKTQRSARCPC*DPLLGP
Trigger: GGGCCCGAGCAGAGGGTCTCAGCAGGGACAGCGTGC...GGACCTTTGGGTTTTGAAGAAGAGCCCAAGTCTGGTGCTTGGGATCCTGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR GCA 90 bp TTCGTCTCCTCCCACGTTGCTTCCCTCCAGTCTGCCCTCTATTTGCTCAAGGACAAGTGCACGTCGGGCTaGGCGCGCTCGGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: FVSSHVASLQSALYLLKDKCTSG*ARSGSW
Trigger: CCAGGAACCCGAGCGCGCGCAGCCCGACGTGCACTT...GTCCTTGAGCAAATAGAGGGCAGACTGGAGGGAAGCAACGTGGGAGGAGACGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR GCA 90 bp CAGGCATGGTGCTTCCCAGGCCCTGGGAAAACAAACTGGCTTCTTCCAGCCTTTAGGCCCTGGAAGAAGTaGACGTCGGGCTGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: QAWCFPGPGKTNWLLPAFRPWKK*TSGCAR
Trigger: GCGCGCGCAGCCCGACGTGCACTTCTTCCAGGGCCT...AAAGGCTGGAAGAAGCCAGTTTGTTTTCCCAGGGCCTGGGAAGCACCATGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR GCA 90 bp AAGAGTTTAATCGTCCAGCCTTTACCCCTCTCGGGGGCCCAGAGATACTACCACCGCTGCAACTCCTCCTaGGTGGCCCTGAGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: KSLIVQPLPLSGAQRYYHRCNSS*VALSAA
Trigger: GGCGGCGCTCAGGGCCACGCAGGAGGAGTTGCAGCG...GTGGTAGTATCTCTGGGCCCCCGAGAGGGGTAAAGGCTGGACGATTAAACTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR GCA 90 bp ATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCCTCTGCGCCTCCTCTaGCTCGGGAATGGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: MGEDQGRSRLAILQKIDFPLRLL*LGNGLR
Trigger: GCGAAGCCCATTCCCGAGGCAGAGGAGGCGCAGAGG...GAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp GGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGAGGCCGAGTCAGCGTTaGTCGAGGTCCCCACCGGCT +
Preference number: 4 (lower is better)
Translates to: GRSRLAILQKIDFRYWGERPSQR*SRSPPA
Trigger: AGCCGGTGGGGACCTCGAGCAACGCTGACTCGGCCT...CTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp TATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGCATCCGATGTCAGATaGGGCCGCCGCACACTGCTC +
Preference number: 4 (lower is better)
Translates to: YWGESEESVLPRGLVTLCASDVR*GRRTLL
Trigger: GAGCAGTGTGCGGCGGCCGCATCTGACATCGGATGC...GCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR GCA 90 bp AGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGTCCCAGGCGCGGCTCTaGGGGTCAGTGACCGGCGGC +
Preference number: 4 (lower is better)
Translates to: SRLAILQKIDFRYWGESESQARL*GSVTGG
Trigger: GCCGCCGGTCACTGACCCGCAGAGCCGCGCCTGGGA...CTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp GGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGGCGCCTCCGCTCGTaGTGTAGCTGTTTCTCAACT +
Preference number: 4 (lower is better)
Translates to: GESEESVLPRGLVTLCEGRRLRS*CSCFST
Trigger: AGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCG...CCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR GCA 90 bp AGCCAGTCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCGGCACATATCCCTCCTaGCCCGCTGGGTCCCGAACC +
Preference number: 4 (lower is better)
Translates to: SQSRSSPEGLQQGSLSLSGTYPS*PAGSRT
Trigger: GGTTCGGGACCCAGCGGGGCAGGAGGGATATGTGCC...GGACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGACTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR GCA 90 bp CGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTGAGTGCTGTTCAGGCTaGGGGCAGGGCTTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: RYWGESEESVLPRGLVTLECCSG*GQGFGC
Trigger: ACAGCCAAAGCCCTGCCCGCAGCCTGAACAGCACTC...AAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR GCA 90 bp TGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGAGTGCTGTTCAGGCTaGGGGCAGGGCTTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: WGESEESVLPRGLVTLCEECCSG*GQGFGC
Trigger: ACAGCCAAAGCCCTGCCCGCAGCCTGAACAGCACTC...TTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR GCA 90 bp AGGATCGTTAAGTCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGTGGTGGAGGAGGAGTaGTGTTCAGGCTGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: RIVKSVHRDGGRPGPEQIVVEEE*CSGCGQ
Trigger: CTGCCCGCAGCCTGAACAGCACTCCTCCTCCACCAC...AATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGACTTAACGATCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR GCA 90 bp AGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGCTGGCTGTACACACGTaGCCCCTCCTCGGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: RAGADWPSFRRSTSAIGELAVHT*PLLGAH
Trigger: GTGAGCCCCGAGGAGGGGGCACGTGTGTACAGCCAG...CTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR GCA 90 bp AAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCGGCCTCGTCACTCTTTaGGAAGGGCGCCTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: KIDFRYWGESEESVLPRGGLVTL*EGRLAG
Trigger: ACCTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCC...GCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp TATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGGCCTCGTCACTCTTTaGGAAGGGCGCCTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: YWGESEESVLPRGLVTLCGLVTL*EGRLAG
Trigger: ACCTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCC...GCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR GCA 90 bp GTCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCGGCCGCATATTACAATaGTCAGGGCTCCACTGCACC +
Preference number: 4 (lower is better)
Translates to: VCPPGWGKTRAGADWPSFGRILQ*SGLHCT
Trigger: GGTGCAGTGGAGCCCTGAGCATTGTAATATGCGGCC...GAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000586329.5
CDS-3UTR GCA 90 bp ATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGTCTTCCCATGCGTGCTaGAAGGGAGGACACGAGGGG +
Preference number: 4 (lower is better)
Translates to: IGESLRSPFSHGASSLFASSHAC*KGGHEG
Trigger: CCCCTCGTGTCCTCCCTTGCAGCACGCATGGGAAGA...CGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586329.5
CDS-3UTR CCA 90 bp GTCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCACCGGCACGATGGCGCCCAGTaGGTACGACTCCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: VQILSGGTAARIVKSVHRHDGAQ*VRLQLL
Trigger: GAGGAGCTGGAGTCGTACCCACTGGGCGCCATCGTG...CCGGTGGACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp TCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCACCGGGCGTCACAGCGCACGATaGCGCCCAGTGGGTACGACT +
Preference number: 4 (lower is better)
Translates to: SRSSPEGLQQGSLSLSTGRHSAR*RPVGTT
Trigger: AGTCGTACCCACTGGGCGCCATCGTGCGCTGTGACG...CCCGGTGGACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp TCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCGCGGCTCCTGCCGGGTaGCATCACCGCGTCACAGCG +
Preference number: 4 (lower is better)
Translates to: SFRRSTSAIGESLRSPFSAAPAG*HHRVTA
Trigger: CGCTGTGACGCGGTGATGCCACCCGGCAGGAGCCGC...GGAGAACGGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp CAGGCATGGTGCTTCCCAGGCCCTGGGAAAACAAACTGGCTTCTTCCAGCCTTTCCGAGGCGCAGGCCCTaGAAGAAGTGCACGTCGGGC +
Preference number: 4 (lower is better)
Translates to: QAWCFPGPGKTNWLLPAFPRRRP*KKCTSG
Trigger: GCCCGACGTGCACTTCTTCCAGGGCCTGCGCCTCGG...AAAGGCTGGAAGAAGCCAGTTTGTTTTCCCAGGGCCTGGGAAGCACCATGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CCA 90 bp GGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGTTGTGCAGAGCCCCCTaGATGTCCTCTCGGATCAGC +
Preference number: 4 (lower is better)
Translates to: GESEESVLPRGLVTLCEGLCRAP*MSSRIS
Trigger: GCTGATCCGAGAGGACATCCAGGGGGCTCTGCACAA...CCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp TCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGTTGTGCAGAGCCCCCTaGATGTCCTCTCGGATCAGC +
Preference number: 4 (lower is better)
Translates to: STGMGEDQGRSRLAILQKLCRAP*MSSRIS
Trigger: GCTGATCCGAGAGGACATCCAGGGGGCTCTGCACAA...CTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp CAGTCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCACCCCTCTGCCTCGGGAATaGGCTTCGCCTGGGGTCGTC +
Preference number: 4 (lower is better)
Translates to: QSRSSPEGLQQGSLSLSTPLPRE*ASPGVV
Trigger: GACGACCCCAGGCGAAGCCCATTCCCGAGGCAGAGG...GGTGGACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp TCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGAGCTCGTTTTCACGTaGAGTGACGTTGTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: SEESVLPRGLVTLCEGRLELVFT*SDVVPQ
Trigger: CTGCGGGACAACGTCACTCCACGTGAAAACGAGCTC...CAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR CCA 90 bp CCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGGAACTCGGGTCTGTATaGGGGTCCCTCCTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: PGPEQIGHPSEDRLPLLGELGSV*GSLLRG
Trigger: TCCCCGGAGGAGGGACCCCCATACAGACCCGAGTTC...CCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp AGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGCCATTGACAGCGACCTaGGGGGCGCTTTGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: RAGADWPSFRRSTSAIGEPLTAT*GALCCR
Trigger: CCGGCAGCAAAGCGCCCCCCAGGTCGCTGTCAATGG...CTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR CCA 90 bp GCTGTTTATAGGCTGGGCCGCATATTACAATGCTCAGGGCTCCACTGCACCCTCCTGCGGGCAGGGCTTTaGCTGTGGTGCAGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: AVYRLGRILQCSGLHCTLLRAGL*LWCSRG
Trigger: ACCCCGGCTGCACCACAGCCAAAGCCCTGCCCGCAG...GAGGGTGCAGTGGAGCCCTGAGCATTGTAATATGCGGCCCAGCCTATAAACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000201647.11
ENST00000245618.5
CDS-3UTR CCA 90 bp CAGCCAGTCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCGCTGCACGGTGACCTaGCTGTACACACGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: QPVQILSGGTAARIVKSVRCTVT*LYTRAP
Trigger: GGGGGCACGTGTGTACAGCCAGGTCACCGTGCAGCG...GACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGACTGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR CCA 90 bp TCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGAGGGCCGGAGCAGATTaGCCATCCTTCAGAAGATCG +
Preference number: 4 (lower is better)
Translates to: SEESVLPRGLVTLCEGRLRAGAD*PSFRRS
Trigger: CGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCT...CAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp CCTCTCGGGGGTCTGCTAGCGCTTTCCGTAGACTGTCTCCACGCCCTCCCCACTAGGGCCGGAGCAGATTaGCCATCCTTCAGAAGATCG +
Preference number: 4 (lower is better)
Translates to: PLGGLLALSVDCLHALPTRAGAD*PSFRRS
Trigger: CGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCT...AGTGGGGAGGGCGTGGAGACAGTCTACGGAAAGCGCTAGCAGACCCCCGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000586329.5
CDS-3UTR CCA 90 bp GAGTCTGAGCCCCCACTGCTTGGTAGAACCATGACTTGGAATGTTCTTTCCTCCGCGGCACCCCCTGTGTaGGGCCGGCAGCTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: ESEPPLLGRTMTWNVLSSAAPPV*GRQLPA
Trigger: TGCTGGGAGCTGCCGGCCCCACACAGGGGGTGCCGC...GGAGGAAAGAACATTCCAAGTCATGGTTCTACCAAGCAGTGGGGGCTCAGACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CCA 90 bp GAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCAAACGTCACCAGGTGCTaGCAAAGAGGAAACGCAAGG +
Preference number: 4 (lower is better)
Translates to: EESVLPRGLVTLCEGRLANVTRC*QRGNAR
Trigger: CCTTGCGTTTCCTCTTTGCCAGCACCTGGTGACGTT...TGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586329.5
CDS-3UTR TCA 90 bp AGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGGCCCTGGCTATCCATaGCGGCCAACTTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: RRSTSAIGESLRSPFSHGGPGYP*RPTSWR
Trigger: CCTCCAGGAAGTTGGCCGTCATGGATAGCCAGGGCC...CCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR TCA 90 bp CAGCCTTTACCCCTCTCGGGGGCCCAGAGATACTACCACTTCCTAACTTTCCCACCGGGTCGAGCAGCGTaGCATGGTCGGGAGACACTC +
Preference number: 4 (lower is better)
Translates to: QPLPLSGAQRYYHFLTFPPGRAA*HGRETL
Trigger: GAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGG...TGGGAAAGTTAGGAAGTGGTAGTATCTCTGGGCCCCCGAGAGGGGTAAAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR TCA 90 bp CCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCCCCGCTCTACGGTGCTaGTCACTGCGCGGACTGACG +
Preference number: 4 (lower is better)
Translates to: PEQIGHPSEDRLPLLGRVPALRC*SLRGLT
Trigger: CGTCAGTCCGCGCAGTGATCAGCACCGTAGAGCGGG...GACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR TCA 90 bp CAGCCTTTACCCCTCTCGGGGGCCCAGAGATACTACCACTTCCTAACTTTCCCACCCGCTCTACGGTGCTaGTCACTGCGCGGACTGACG +
Preference number: 4 (lower is better)
Translates to: QPLPLSGAQRYYHFLTFPPALRC*SLRGLT
Trigger: CGTCAGTCCGCGCAGTGATCAGCACCGTAGAGCGGG...TGGGAAAGTTAGGAAGTGGTAGTATCTCTGGGCCCCCGAGAGGGGTAAAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR TCA 90 bp ATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCGCGGCTCCCAGCCGCTaGAGAACTCGGGTCTGTATG +
Preference number: 4 (lower is better)
Translates to: MGEDQGRSRLAILQKIDFAAPSR*RTRVCM
Trigger: CATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGC...GAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR TCA 90 bp TGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGTCTCTGACTCCAGCTaGGGCTCAGATTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: WGESEESVLPRGLVTLCEVSDSS*GSDSGS
Trigger: GGAGCCAGAATCTGAGCCTCAGCTGGAGTCAGAGAC...TTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR TCA 90 bp CCTCTCGGGGGTCTGCTAGCGCTTTCCGTAGACTGTCTCCACGCCCTCCCCACTTTTTCCTGCTGTCTCTaGCTCCAGCTGAGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: PLGGLLALSVDCLHALPTFSCCL*LQLRLR
Trigger: TCTGAGCCTCAGCTGGAGTCAGAGACAGCAGGAAAA...AGTGGGGAGGGCGTGGAGACAGTCTACGGAAAGCGCTAGCAGACCCCCGAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000586329.5
CDS-3UTR TCA 90 bp AGGATCGTTAAGTCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGTACGTCCCGCTGCTTaGCCGACAGCTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: RIVKSVHRDGGRPGPEQIVRPAA*PTAHCC
Trigger: ACAGCAGTGAGCTGTCGGTCAAGCAGCGGGACGTAC...AATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGACTTAACGATCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR TCA 90 bp AAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCGTACGTCCCGCTGCTTaGCCGACAGCTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: KIDFRYWGESEESVLPRGVRPAA*PTAHCC
Trigger: ACAGCAGTGAGCTGTCGGTCAAGCAGCGGGACGTAC...GCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR TCA 90 bp TGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGCCTGGCAGGTCAAATaGCCTCCATTTCCACCTCGC +
Preference number: 4 (lower is better)
Translates to: WGESEESVLPRGLVTLCEAWQVK*PPFPPR
Trigger: GCGAGGTGGAAATGGAGGTCATTTGACCTGCCAGGC...TTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR TCA 90 bp ATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGCTATTGGGGAGAGTCTaGGGAGTCCGTTCTCCCACG +
Preference number: 4 (lower is better)
Translates to: IGESLRSPFSHGASSLFALLGRV*GVRSPT
Trigger: CGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAG...CGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR GCA 90 bp TTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGCAACGAGCGGCTCCTaGCGGGTGGCATCACCGCGT +
Preference number: 4 (lower is better)
Translates to: FRRSTSAIGESLRSPFSHATSGS*RVASPR
Trigger: ACGCGGTGATGCCACCCGGCAGGAGCCGCTCGTTGC...GTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp GTTGCTTCCCTCCAGTCTGCCCTCTATTTGCTCAAGGACCCTAGAGTTCTAGTCGGCGAGCGGTCGCGCTaGAACTCCTCCTGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: VASLQSALYLLKDPRVLVGERSR*NSSCVA
Trigger: GGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCC...GACTAGAACTCTAGGGTCCTTGAGCAAATAGAGGGCAGACTGGAGGGAAGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR GCA 90 bp GCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCCTCTGCGCCTCCTCTaGCTCGGGAATGGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: AGADWPSFRRSTSAIGESPLRLL*LGNGLR
Trigger: GCGAAGCCCATTCCCGAGGCAGAGGAGGCGCAGAGG...ACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp GATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTAGGGGTCGGCGATGTTaGCGCGCAGCCGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: DWPSFRRSTSAIGESLRSRGRRC*RAAGPA
Trigger: TGCTGGCCCGGCTGCGCGGCAACATCGCCGACCCCT...ACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp TTACCCCTCTCGGGGGCCCAGAGATACTACCACTTCCTAACTTTCCCAGAAACTAGGGGTCGGCGATGTTaGCGCGCAGCCGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LPLSGAQRYYHFLTFPETRGRRC*RAAGPA
Trigger: TGCTGGCCCGGCTGCGCGGCAACATCGCCGACCCCT...AGTTTCTGGGAAAGTTAGGAAGTGGTAGTATCTCTGGGCCCCCGAGAGGGGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR GCA 90 bp CCAGGATCCCAAGCACCAGACTTGGGCTCTTCTTCAAAACCCAAAGGTCCAATTTCCCAGGCGCGGCTCTaGGGGTCAGTGACCGGCGGC +
Preference number: 4 (lower is better)
Translates to: PGSQAPDLGSSSKPKGPISQARL*GSVTGG
Trigger: GCCGCCGGTCACTGACCCGCAGAGCCGCGCCTGGGA...AATTGGACCTTTGGGTTTTGAAGAAGAGCCCAAGTCTGGTGCTTGGGATCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR GCA 90 bp GGATCGTTAAGTCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGTCCAGTACGTCCCGCTaGTTGACCGACAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: GSLSLSTGMGEDQGRSRLSSTSR*LTDSSL
Trigger: CAGTGAGCTGTCGGTCAAGCAGCGGGACGTACTGGA...CAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGACTTAACGATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp TCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCACCGGGGAGTGCTGTTCAGGCTaGGGGCAGGGCTTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: SRSSPEGLQQGSLSLSTGECCSG*GQGFGC
Trigger: ACAGCCAAAGCCCTGCCCGCAGCCTGAACAGCACTC...CCCGGTGGACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR GCA 90 bp ACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGTGCAGCGAGAAAAGCTaGGCCCCGGTCAGCACACCC +
Preference number: 4 (lower is better)
Translates to: TRAGADWPSFRRSTSAIGCSEKS*APVSTP
Trigger: GGGTGTGCTGACCGGGGCGCAGCTTTTCTCGCTGCA...CCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR GCA 90 bp CAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGGCCTCGTCACTCTTTaGGAAGGGCGCCTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: QGRSRLAILQKIDFRYWGGLVTL*EGRLAG
Trigger: ACCTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCC...TCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp CAGGCATGGTGCTTCCCAGGCCCTGGGAAAACAAACTGGCTTCTTCCAGCCTTTCCTGCTGAGACCCTCTaGTCGGGCCCTCACCCAGAC +
Preference number: 4 (lower is better)
Translates to: QAWCFPGPGKTNWLLPAFPAETL*SGPHPD
Trigger: GTCTGGGTGAGGGCCCGAGCAGAGGGTCTCAGCAGG...AAAGGCTGGAAGAAGCCAGTTTGTTTTCCCAGGGCCTGGGAAGCACCATGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR GCA 90 bp TCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGCTTTCTTCCCATGCGTaGTGCAAGGGAGGACACGAG +
Preference number: 4 (lower is better)
Translates to: STGMGEDQGRSRLAILQKLSSHA*CKGGHE
Trigger: CTCGTGTCCTCCCTTGCAGCACGCATGGGAAGAAAG...CTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586329.5
CDS-3UTR CCA 90 bp GTCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCACCGGTCGAGCAGCGTGACATaGTCGGGAGACACTCGCAGC +
Preference number: 4 (lower is better)
Translates to: VQILSGGTAARIVKSVHRSSSVT*SGDTRS
Trigger: GCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGA...CCGGTGGACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp AGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGCACGATGGCGCCCAGTaGGTACGACTCCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RAGADWPSFRRSTSAIGEHDGAQ*VRLQLL
Trigger: GAGGAGCTGGAGTCGTACCCACTGGGCGCCATCGTG...CTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp CCAGAGTCTGAGCCCCCACTGCTTGGTAGAACCATGACTTGGAATGTTCTTTCCGCGGCTCCTGCCGGGTaGCATCACCGCGTCACAGCG +
Preference number: 4 (lower is better)
Translates to: PESEPPLLGRTMTWNVLSAAPAG*HHRVTA
Trigger: CGCTGTGACGCGGTGATGCCACCCGGCAGGAGCCGC...GGAAAGAACATTCCAAGTCATGGTTCTACCAAGCAGTGGGGGCTCAGACTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CCA 90 bp ATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGTTGTGCAGAGCCCCCTaGATGTCCTCTCGGATCAGC +
Preference number: 4 (lower is better)
Translates to: IGESLRSPFSHGASSLFALCRAP*MSSRIS
Trigger: GCTGATCCGAGAGGACATCCAGGGGGCTCTGCACAA...CGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp CTGTCTCTGACTCCAGCTGAGGCTCAGATTCTGGCTCCAAGTCTCGGTGACTGTCCTCTGCCTCGGGAATaGGCTTCGCCTGGGGTCGTC +
Preference number: 4 (lower is better)
Translates to: LSLTPAEAQILAPSLGDCPLPRE*ASPGVV
Trigger: GACGACCCCAGGCGAAGCCCATTCCCGAGGCAGAGG...ACAGTCACCGAGACTTGGAGCCAGAATCTGAGCCTCAGCTGGAGTCAGAGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CCA 90 bp TCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGACGTCGTCGAACACGTaGTTCAGGATGTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: SEESVLPRGLVTLCEGRLTSSNT*FRMSTS
Trigger: GGAAGTGGACATCCTGAACCACGTGTTCGACGACGT...CAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp TCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAGCTCGTTTTCACGTaGAGTGACGTTGTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: SVHRDGGRPGPEQIGHPSELVFT*SDVVPQ
Trigger: CTGCGGGACAACGTCACTCCACGTGAAAACGAGCTC...TGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp TCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGGAGCTCGTTTTCACGTaGAGTGACGTTGTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: STGMGEDQGRSRLAILQKELVFT*SDVVPQ
Trigger: CTGCGGGACAACGTCACTCCACGTGAAAACGAGCTC...CTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp GTCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCATCGACTTCCGCTATTaGGGAGAGTCTGAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: VCPPGWGKTRAGADWPSFIDFRY*GESEES
Trigger: GGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGAT...GAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp CAGGCATGGTGCTTCCCAGGCCCTGGGAAAACAAACTGGCTTCTTCCAGCCTTTTTAGCCCCAGAAGTCTaGGTCCCGCCCCCTCCCACC +
Preference number: 4 (lower is better)
Translates to: QAWCFPGPGKTNWLLPAFLAPEV*VPPPPT
Trigger: GGTGGGAGGGGGCGGGACCCAGACTTCTGGGGCTAA...AAAGGCTGGAAGAAGCCAGTTTGTTTTCCCAGGGCCTGGGAAGCACCATGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CCA 90 bp CCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGCCATTGACAGCGACCTaGGGGGCGCTTTGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: PGPEQIGHPSEDRLPLLGPLTAT*GALCCR
Trigger: CCTACAGCAAAGCGCCCCCCAGGTCGCTGTCAATGG...CCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586329.5
CDS-3UTR CCA 90 bp TATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCCCATTGACAGCGACCTaGGGGGCGCTTTGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: YWGESEESVLPRGLVTLCPLTAT*GALCCR
Trigger: CCTACAGCAAAGCGCCCCCCAGGTCGCTGTCAATGG...GCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586329.5
ENST00000588359.5
3UTR CAA 72 bp TCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATaGGCCATCCTTCAGAAGATCGACTTCCGCTATTGG +
Preference number: 4 (lower is better)
Translates to: STGMGEDQGRSR*AILQKIDFRYW
Trigger: CCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR TCA 90 bp CCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCCGGTGCTCATGGTGCTaGGTGGTAGCTCCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: PEQIGHPSEDRLPLLGRVRCSWC*VVAPAH
Trigger: GTGGGCAGGAGCTACCACTCAGCACCATGAGCACCG...GACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000201647.11
ENST00000540810.5
CDS-3UTR TCA 90 bp ATGGTGCTTCCCAGGCCCTGGGAAAACAAACTGGCTTCTTCCAGCCTTTTGGGGCGGTGCTCATGGTGCTaGGTGGTAGCTCCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: MVLPRPWENKLASSSLLGRCSWC*VVAPAH
Trigger: GTGGGCAGGAGCTACCACTCAGCACCATGAGCACCG...CCCCAAAAGGCTGGAAGAAGCCAGTTTGTTTTCCCAGGGCCTGGGAAGCACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR TCA 90 bp GGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGTTTTCCTGCTGTCTCTaGCTCCAGCTGAGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: GESEESVLPRGLVTLCEGFSCCL*LQLRLR
Trigger: TCTGAGCCTCAGCTGGAGTCAGAGACAGCAGGAAAA...CCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR TCA 90 bp TTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGCGAGCGCTGCACGGTaGCCTGGCTGTACACACGTG +
Preference number: 4 (lower is better)
Translates to: FRRSTSAIGESLRSPFSHASAAR*PGCTHV
Trigger: CACGTGTGTACAGCCAGGTCACCGTGCAGCGCTCGC...GTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR TCA 90 bp GGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCACTGCCTCCAGCTCTaGCACTTTCTCTTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: GESEESVLPRGLVTLCEGHCLQL*HFLFVL
Trigger: GAGGACAAAGAGAAAGTGTCAGAGCTGGAGGCAGTG...CCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR TCA 90 bp GCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCCTGGCAGGTCAAATaGCCTCCATTTCCACCTCGC +
Preference number: 4 (lower is better)
Translates to: AIGESLRSPFSHGASSLFAWQVK*PPFPPR
Trigger: GCGAGGTGGAAATGGAGGTCATTTGACCTGCCAGGC...AAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR TCA 90 bp CCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGCTATTGGGGAGAGTCTaGGGAGTCCGTTCTCCCACG +
Preference number: 4 (lower is better)
Translates to: PGPEQIGHPSEDRLPLLGLLGRV*GVRSPT
Trigger: CGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAG...CCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR TCA 90 bp TGGGTCTCCAGGATCCCAAGCACCAGACTTGGGCTCTTCTTCAAAACCCAAAGGGGCTCCAAGTCTCGGTaGCTGTGCAGGGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: WVSRIPSTRLGLFFKTQRGSKSR*LCRGEG
Trigger: CCCCTCTCCCCTGCACAGTCACCGAGACTTGGAGCC...CCTTTGGGTTTTGAAGAAGAGCCCAAGTCTGGTGCTTGGGATCCTGGAGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR GCA 90 bp GATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTGCAACGAGCGGCTCCTaGCGGGTGGCATCACCGCGT +
Preference number: 4 (lower is better)
Translates to: DWPSFRRSTSAIGESLRSATSGS*RVASPR
Trigger: ACGCGGTGATGCCACCCGGCAGGAGCCGCTCGTTGC...ACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp TCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGGCGTACTTGATCTTCTaGAGCACGTCGGTGTACTCG +
Preference number: 4 (lower is better)
Translates to: STGMGEDQGRSRLAILQKAYLIF*STSVYS
Trigger: CGAGTACACCGACGTGCTGCAGAAGATCAAGTACGC...CTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp TATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCCGGCGCCTCCGCTCGTaGTGTAGCTGTTTCTCAACT +
Preference number: 4 (lower is better)
Translates to: YWGESEESVLPRGLVTLCRRLRS*CSCFST
Trigger: AGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCG...GCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR GCA 90 bp AGGATCGTTAAGTCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTCGGCGCCTCCGCTCGTaGTGTAGCTGTTTCTCAACT +
Preference number: 4 (lower is better)
Translates to: RIVKSVHRDGGRPGPEQIRRLRS*CSCFST
Trigger: AGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCG...AATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGACTTAACGATCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp TCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCACCGGGTCCAGTACGTCCCGCTaGTTGACCGACAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SRSSPEGLQQGSLSLSTGSSTSR*LTDSSL
Trigger: CAGTGAGCTGTCGGTCAAGCAGCGGGACGTACTGGA...CCCGGTGGACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp TTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGCACATATCCCTCCTaGCCCGCTGGGTCCCGAACC +
Preference number: 4 (lower is better)
Translates to: FRRSTSAIGESLRSPFSHGTYPS*PAGSRT
Trigger: GGTTCGGGACCCAGCGGGGCAGGAGGGATATGTGCC...GTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR GCA 90 bp CAGCCAGTCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCGAGTGCTGTTCAGGCTaGGGGCAGGGCTTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: QPVQILSGGTAARIVKSVECCSG*GQGFGC
Trigger: ACAGCCAAAGCCCTGCCCGCAGCCTGAACAGCACTC...GACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGACTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR GCA 90 bp ATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGGGCCGCATATTACAATaGTCAGGGCTCCACTGCACC +
Preference number: 4 (lower is better)
Translates to: IGESLRSPFSHGASSLFAGRILQ*SGLHCT
Trigger: GGTGCAGTGGAGCCCTGAGCATTGTAATATGCGGCC...CGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000586329.5
CDS-3UTR GCA 90 bp TTCGTCTCCTCCCACGTTGCTTCCCTCCAGTCTGCCCTCTATTTGCTCAAGGACGGAGCCCAGGCATGGTaGTTCCCAGGCCCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: FVSSHVASLQSALYLLKDGAQAW*FPGPGK
Trigger: TTTCCCAGGGCCTGGGAAGCACCATGCCTGGGCTCC...GTCCTTGAGCAAATAGAGGGCAGACTGGAGGGAAGCAACGTGGGAGGAGACGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CCA 90 bp CCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCGCCCAGACTCGGCCCTaGCTATCCATGACGGCCAAC +
Preference number: 4 (lower is better)
Translates to: PEQIGHPSEDRLPLLGRVAQTRP*LSMTAN
Trigger: GTTGGCCGTCATGGATAGCCAGGGCCGAGTCTGGGC...GACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp TCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCACTCCAGCTCCTCCTTaGAGGCCGGGTCGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: SFRRSTSAIGESLRSPFSTPAPP*RPGRAA
Trigger: CGCTGCTCGACCCGGCCTCCAAGGAGGAGCTGGAGT...GGAGAACGGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp CCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCCGTCACAGCGCACGATaGCGCCCAGTGGGTACGACT +
Preference number: 4 (lower is better)
Translates to: PEQIGHPSEDRLPLLGRVRHSAR*RPVGTT
Trigger: AGTCGTACCCACTGGGCGCCATCGTGCGCTGTGACG...GACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp ATGGTGCTTCCCAGGCCCTGGGAAAACAAACTGGCTTCTTCCAGCCTTTTGGGGCGTCACAGCGCACGATaGCGCCCAGTGGGTACGACT +
Preference number: 4 (lower is better)
Translates to: MVLPRPWENKLASSSLLGRHSAR*RPVGTT
Trigger: AGTCGTACCCACTGGGCGCCATCGTGCGCTGTGACG...CCCCAAAAGGCTGGAAGAAGCCAGTTTGTTTTCCCAGGGCCTGGGAAGCACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CCA 90 bp GGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGACGTCGTCGAACACGTaGTTCAGGATGTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: GESLRSPFSHGASSLFAKTSSNT*FRMSTS
Trigger: GGAAGTGGACATCCTGAACCACGTGTTCGACGACGT...CTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp TTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTCCCCATTGACAGCGACCTaGGGGGCGCTTTGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: LAILQKIDFRYWGESEESPLTAT*GALCCR
Trigger: CCGGCAGCAAAGCGCCCCCCAGGTCGCTGTCAATGG...GGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR CCA 90 bp AGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCCCCCCAGATCCTTCTTaGCCATGTTCTGTTCATGTC +
Preference number: 4 (lower is better)
Translates to: SLRSPFSHGASSLFAKGAPPDPS*PCSVHV
Trigger: GACATGAACAGAACATGGCCAAGAAGGATCTGGGGG...GGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000245618.5
ENST00000588359.5
CDS-3UTR TCA 90 bp AGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGCCCGCTCTACGGTGCTaGTCACTGCGCGGACTGACG +
Preference number: 4 (lower is better)
Translates to: RLAILQKIDFRYWGESEEPALRC*SLRGLT
Trigger: CGTCAGTCCGCGCAGTGATCAGCACCGTAGAGCGGG...CTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR TCA 90 bp AGGCTGTTTATAGGCTGGGCCGCATATTACAATGCTCAGGGCTCCACTGCACCCCGTTTTCACGTGGAGTaGCGTTGTCCCGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: RLFIGWAAYYNAQGSTAPRFHVE*RCPAAA
Trigger: CGCTGCTGCGGGACAACGTCACTCCACGTGAAAACG...GGGTGCAGTGGAGCCCTGAGCATTGTAATATGCGGCCCAGCCTATAAACAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000586329.5
CDS-3UTR TCA 90 bp CAGCCTTTACCCCTCTCGGGGGCCCAGAGATACTACCACTTCCTAACTTTCCCACGTTTTCACGTGGAGTaGCGTTGTCCCGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: QPLPLSGAQRYYHFLTFPRFHVE*RCPAAA
Trigger: CGCTGCTGCGGGACAACGTCACTCCACGTGAAAACG...TGGGAAAGTTAGGAAGTGGTAGTATCTCTGGGCCCCCGAGAGGGGTAAAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR TCA 90 bp TTAAGTCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCTTTTCCTGCTGTCTCTaGCTCCAGCTGAGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: LSLSTGMGEDQGRSRLAIFSCCL*LQLRLR
Trigger: TCTGAGCCTCAGCTGGAGTCAGAGACAGCAGGAAAA...GATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGACTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR TCA 90 bp GGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGGCCTGGCAGGTCAAATaGCCTCCATTTCCACCTCGC +
Preference number: 4 (lower is better)
Translates to: GRSRLAILQKIDFRYWGEAWQVK*PPFPPR
Trigger: GCGAGGTGGAAATGGAGGTCATTTGACCTGCCAGGC...CTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR TCA 90 bp CAGTCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCACCCTATTGGGGAGAGTCTaGGGAGTCCGTTCTCCCACG +
Preference number: 4 (lower is better)
Translates to: QSRSSPEGLQQGSLSLSTLLGRV*GVRSPT
Trigger: CGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAG...GGTGGACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR TCA 90 bp CAGGCATGGTGCTTCCCAGGCCCTGGGAAAACAAACTGGCTTCTTCCAGCCTTTTTGCCCCCAAGCCCTTaGAGTCCCAAGCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: QAWCFPGPGKTNWLLPAFLPPSP*SPKPAP
Trigger: AGGAGCAGGCTTGGGACTTCAAGGGCTTGGGGGCAA...AAAGGCTGGAAGAAGCCAGTTTGTTTTCCCAGGGCCTGGGAAGCACCATGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR GCA 90 bp TCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCGCTCAGGCTCTGCCCTaGTCTCCGCTGTCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: SFRRSTSAIGESLRSPFSAQALP*SPLSFP
Trigger: GGGAAAGGACAGCGGAGAGCAGGGCAGAGCCTGAGC...GGAGAACGGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000201647.11
CDS-3UTR GCA 90 bp GCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTGCATCCTCCACGGTATaGACGCCATCGTCCTCACCC +
Preference number: 4 (lower is better)
Translates to: AGADWPSFRRSTSAIGESASSTV*TPSSSP
Trigger: GGGTGAGGACGATGGCGTGCATACCGTGGAGGATGC...ACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp CTGTCTCTGACTCCAGCTGAGGCTCAGATTCTGGCTCCAAGTCTCGGTGACTGTGCATCCTCCACGGTATaGACGCCATCGTCCTCACCC +
Preference number: 4 (lower is better)
Translates to: LSLTPAEAQILAPSLGDCASSTV*TPSSSP
Trigger: GGGTGAGGACGATGGCGTGCATACCGTGGAGGATGC...ACAGTCACCGAGACTTGGAGCCAGAATCTGAGCCTCAGCTGGAGTCAGAGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR GCA 90 bp CCAGGATCCCAAGCACCAGACTTGGGCTCTTCTTCAAAACCCAAAGGTCCAATTGCAACGAGCGGCTCCTaGCGGGTGGCATCACCGCGT +
Preference number: 4 (lower is better)
Translates to: PGSQAPDLGSSSKPKGPIATSGS*RVASPR
Trigger: ACGCGGTGATGCCACCCGGCAGGAGCCGCTCGTTGC...AATTGGACCTTTGGGTTTTGAAGAAGAGCCCAAGTCTGGTGCTTGGGATCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR GCA 90 bp GTTGCTTCCCTCCAGTCTGCCCTCTATTTGCTCAAGGACCCTAGAGTTCTAGTCCCTCTGCGCCTCCTCTaGCTCGGGAATGGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: VASLQSALYLLKDPRVLVPLRLL*LGNGLR
Trigger: GCGAAGCCCATTCCCGAGGCAGAGGAGGCGCAGAGG...GACTAGAACTCTAGGGTCCTTGAGCAAATAGAGGGCAGACTGGAGGGAAGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR GCA 90 bp GAGTCTGAGCCCCCACTGCTTGGTAGAACCATGACTTGGAATGTTCTTTCCTCCAGGCCGAGTCAGCGTTaGTCGAGGTCCCCACCGGCT +
Preference number: 4 (lower is better)
Translates to: ESEPPLLGRTMTWNVLSSRPSQR*SRSPPA
Trigger: AGCCGGTGGGGACCTCGAGCAACGCTGACTCGGCCT...GGAGGAAAGAACATTCCAAGTCATGGTTCTACCAAGCAGTGGGGGCTCAGACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR GCA 90 bp GCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGACTTCCCGCTCCGCCTaGAGAACCGCCAGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: ADWPSFRRSTSAIGESLRTSRSA*RTARSG
Trigger: TCCTGACCTGGCGGTTCTGCAGGCGGAGCGGGAAGT...CCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp TCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCACTTCCCGCTCCGCCTaGAGAACCGCCAGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: SFRRSTSAIGESLRSPFSTSRSA*RTARSG
Trigger: TCCTGACCTGGCGGTTCTGCAGGCGGAGCGGGAAGT...GGAGAACGGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp GTCTCCAGGATCCCAAGCACCAGACTTGGGCTCTTCTTCAAAACCCAAAGGTCCACTTCCCGCTCCGCCTaGAGAACCGCCAGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: VSRIPSTRLGLFFKTQRSTSRSA*RTARSG
Trigger: TCCTGACCTGGCGGTTCTGCAGGCGGAGCGGGAAGT...GGACCTTTGGGTTTTGAAGAAGAGCCCAAGTCTGGTGCTTGGGATCCTGGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR GCA 90 bp AGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGGGCCCGAAAAGGAAGTaGAACAGCTCCGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: RAGADWPSFRRSTSAIGEGPKRK*NSSGEE
Trigger: CTCCTCTCCGGAGCTGTTGCACTTCCTTTTCGGGCC...CTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp ATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCGGCCCGAAAAGGAAGTaGAACAGCTCCGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: MGEDQGRSRLAILQKIDFGPKRK*NSSGEE
Trigger: CTCCTCTCCGGAGCTGTTGCACTTCCTTTTCGGGCC...GAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp CCAGCCTTTTGGGGATCCAGGGATCCAACCTCTCAGACTTTACCCACTCCCAGCGGCCCGAAAAGGAAGTaGAACAGCTCCGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PAFWGSRDPTSQTLPTPSGPKRK*NSSGEE
Trigger: CTCCTCTCCGGAGCTGTTGCACTTCCTTTTCGGGCC...GCTGGGAGTGGGTAAAGTCTGAGAGGTTGGATCCCTGGATCCCCAAAAGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR GCA 90 bp TTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTCCGCATCCGATGTCAGATaGGGCCGCCGCACACTGCTC +
Preference number: 4 (lower is better)
Translates to: LAILQKIDFRYWGESEESASDVR*GRRTLL
Trigger: GAGCAGTGTGCGGCGGCCGCATCTGACATCGGATGC...GGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp AGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGTCCAGTACGTCCCGCTaGTTGACCGACAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: RRSTSAIGESLRSPFSHGSSTSR*LTDSSL
Trigger: CAGTGAGCTGTCGGTCAAGCAGCGGGACGTACTGGA...CCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp ACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGTCCAGTACGTCCCGCTaGTTGACCGACAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: TRAGADWPSFRRSTSAIGSSTSR*LTDSSL
Trigger: CAGTGAGCTGTCGGTCAAGCAGCGGGACGTACTGGA...CCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp GATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTGGCACATATCCCTCCTaGCCCGCTGGGTCCCGAACC +
Preference number: 4 (lower is better)
Translates to: DWPSFRRSTSAIGESLRSGTYPS*PAGSRT
Trigger: GGTTCGGGACCCAGCGGGGCAGGAGGGATATGTGCC...ACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR GCA 90 bp ACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCCAGAACGTCACCAGGTaGTGGCAAAGAGGAAACGCA +
Preference number: 4 (lower is better)
Translates to: TGMGEDQGRSRLAILQKIQNVTR*WQRGNA
Trigger: TGCGTTTCCTCTTTGCCAGCACCTGGTGACGTTCTG...GATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586329.5
CDS-3UTR CCA 90 bp CCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCCTTGGCGCTTGGCTTTaGGGCAGCTTCTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: PEQIGHPSEDRLPLLGRVLGAWL*GSFWAC
Trigger: ACAGGCCCAGAAGCTGCCCCAAAGCCAAGCGCCAAG...GACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000201647.11
CDS-3UTR CCA 90 bp GCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGGCCCAGACTCGGCCCTaGCTATCCATGACGGCCAAC +
Preference number: 4 (lower is better)
Translates to: ADWPSFRRSTSAIGESLRAQTRP*LSMTAN
Trigger: GTTGGCCGTCATGGATAGCCAGGGCCGAGTCTGGGC...CCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp GCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTTCGAGCAGCGTGACATaGTCGGGAGACACTCGCAGC +
Preference number: 4 (lower is better)
Translates to: AGADWPSFRRSTSAIGESSSSVT*SGDTRS
Trigger: GCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGA...ACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp TCCAGCCTCACTGCTTTGTTTTCGTCTCCTCCCACGTTGCTTCCCTCCAGTCTGTCGAGCAGCGTGACATaGTCGGGAGACACTCGCAGC +
Preference number: 4 (lower is better)
Translates to: SSLTALFSSPPTLLPSSLSSSVT*SGDTRS
Trigger: GCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGA...CAGACTGGAGGGAAGCAACGTGGGAGGAGACGAAAACAAAGCAGTGAGGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CCA 90 bp CCAGAGTCTGAGCCCCCACTGCTTGGTAGAACCATGACTTGGAATGTTCTTTCCACTCCAGCTCCTCCTTaGAGGCCGGGTCGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: PESEPPLLGRTMTWNVLSTPAPP*RPGRAA
Trigger: CGCTGCTCGACCCGGCCTCCAAGGAGGAGCTGGAGT...GGAAAGAACATTCCAAGTCATGGTTCTACCAAGCAGTGGGGGCTCAGACTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CCA 90 bp GCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGCGTCACAGCGCACGATaGCGCCCAGTGGGTACGACT +
Preference number: 4 (lower is better)
Translates to: ADWPSFRRSTSAIGESLRRHSAR*RPVGTT
Trigger: AGTCGTACCCACTGGGCGCCATCGTGCGCTGTGACG...CCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp AGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGGTCTGTCCACCGGGATaGGGGAAGACCAGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: RLAILQKIDFRYWGESEEVCPPG*GKTRAG
Trigger: TCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGAC...CTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR TCA 90 bp GAGTCTGAGCCCCCACTGCTTGGTAGAACCATGACTTGGAATGTTCTTTCCTCCGCGGCTCCCAGCCGCTaGAGAACTCGGGTCTGTATG +
Preference number: 4 (lower is better)
Translates to: ESEPPLLGRTMTWNVLSSAAPSR*RTRVCM
Trigger: CATACAGACCCGAGTTCTTCAGCGGCTGGGAGCCGC...GGAGGAAAGAACATTCCAAGTCATGGTTCTACCAAGCAGTGGGGGCTCAGACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR TCA 90 bp AGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTGGGGTCCAAGCCGTTaGGGCTATCGCAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: RLAILQKIDFRYWGESEEWGPSR*GYRSCP
Trigger: GGGACAGCTGCGATAGCCTCAACGGCTTGGACCCCA...CTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR GCA 90 bp CCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTCCGTTCGCATCCTCCACGGTATaGACGCCATCGTCCTCACCC +
Preference number: 4 (lower is better)
Translates to: PSFRRSTSAIGESLRSPFASSTV*TPSSSP
Trigger: GGGTGAGGACGATGGCGTGCATACCGTGGAGGATGC...GAACGGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp GCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTGCCTCCGCCGACTTCTaGAGCCTCGATACAAAGCTC +
Preference number: 4 (lower is better)
Translates to: AGADWPSFRRSTSAIGESASADF*SLDTKL
Trigger: GAGCTTTGTATCGAGGCTGCAGAAGTCGGCGGAGGC...ACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp CCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCGGCCCGAAAAGGAAGTaGAACAGCTCCGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PEQIGHPSEDRLPLLGRVGPKRK*NSSGEE
Trigger: CTCCTCTCCGGAGCTGTTGCACTTCCTTTTCGGGCC...GACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp TCCACTGCACCCTCTCGGGGGTCTGCTAGCGCTTTCCGTAGACTGTCTCCACGCGTGTTCACAATCATCTaGAGAGGCCCGAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: STAPSRGSASAFRRLSPRVFTII*RGPKRK
Trigger: CTTCCTTTTCGGGCCTCTGCAGATGATTGTGAACAC...GCGTGGAGACAGTCTACGGAAAGCGCTAGCAGACCCCCGAGAGGGTGCAGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000586329.5
CDS-3UTR GCA 90 bp AGTCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTGTGTTCACAATCATCTaGAGAGGCCCGAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: SLSTGMGEDQGRSRLAILVFTII*RGPKRK
Trigger: CTTCCTTTTCGGGCCTCTGCAGATGATTGTGAACAC...AAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp GATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTGCATCCGATGTCAGATaGGGCCGCCGCACACTGCTC +
Preference number: 4 (lower is better)
Translates to: DWPSFRRSTSAIGESLRSASDVR*GRRTLL
Trigger: GAGCAGTGTGCGGCGGCCGCATCTGACATCGGATGC...ACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp ATGGTGCTTCCCAGGCCCTGGGAAAACAAACTGGCTTCTTCCAGCCTTTTGGGGCGGCGCCTCCGCTCGTaGTGTAGCTGTTTCTCAACT +
Preference number: 4 (lower is better)
Translates to: MVLPRPWENKLASSSLLGRRLRS*CSCFST
Trigger: AGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCG...CCCCAAAAGGCTGGAAGAAGCCAGTTTGTTTTCCCAGGGCCTGGGAAGCACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR GCA 90 bp GATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTTGCAGCGAGAAAAGCTaGGCCCCGGTCAGCACACCC +
Preference number: 4 (lower is better)
Translates to: DWPSFRRSTSAIGESLRSCSEKS*APVSTP
Trigger: GGGTGTGCTGACCGGGGCGCAGCTTTTCTCGCTGCA...ACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR CCA 90 bp TGGGTCTCCAGGATCCCAAGCACCAGACTTGGGCTCTTCTTCAAAACCCAAAGGCTTGGCGCTTGGCTTTaGGGCAGCTTCTGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: WVSRIPSTRLGLFFKTQRLGAWL*GSFWAC
Trigger: ACAGGCCCAGAAGCTGCCCCAAAGCCAAGCGCCAAG...CCTTTGGGTTTTGAAGAAGAGCCCAAGTCTGGTGCTTGGGATCCTGGAGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CCA 90 bp AGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGGATAGACTTGGCGCTTaGCTTTGGGGCAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: RAGADWPSFRRSTSAIGEDRLGA*LWGSFW
Trigger: CCAGAAGCTGCCCCAAAGCCAAGCGCCAAGTCTATC...CTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000201647.11
CDS-3UTR CCA 90 bp CCAGAGTCTGAGCCCCCACTGCTTGGTAGAACCATGACTTGGAATGTTCTTTCCGCCCAGACTCGGCCCTaGCTATCCATGACGGCCAAC +
Preference number: 4 (lower is better)
Translates to: PESEPPLLGRTMTWNVLSAQTRP*LSMTAN
Trigger: GTTGGCCGTCATGGATAGCCAGGGCCGAGTCTGGGC...GGAAAGAACATTCCAAGTCATGGTTCTACCAAGCAGTGGGGGCTCAGACTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CCA 90 bp CTGTCTCTGACTCCAGCTGAGGCTCAGATTCTGGCTCCAAGTCTCGGTGACTGTTTGTGCAGAGCCCCCTaGATGTCCTCTCGGATCAGC +
Preference number: 4 (lower is better)
Translates to: LSLTPAEAQILAPSLGDCLCRAP*MSSRIS
Trigger: GCTGATCCGAGAGGACATCCAGGGGGCTCTGCACAA...ACAGTCACCGAGACTTGGAGCCAGAATCTGAGCCTCAGCTGGAGTCAGAGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CCA 90 bp ACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGCTCGTTTTCACGTaGAGTGACGTTGTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: TRAGADWPSFRRSTSAIGELVFT*SDVVPQ
Trigger: CTGCGGGACAACGTCACTCCACGTGAAAACGAGCTC...CCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp AGCCAGTCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCGAGCTCGTTTTCACGTaGAGTGACGTTGTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: SQSRSSPEGLQQGSLSLSELVFT*SDVVPQ
Trigger: CTGCGGGACAACGTCACTCCACGTGAAAACGAGCTC...GGACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGACTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp CCAGAGTCTGAGCCCCCACTGCTTGGTAGAACCATGACTTGGAATGTTCTTTCCGAACTCGGGTCTGTATaGGGGTCCCTCCTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: PESEPPLLGRTMTWNVLSELGSV*GSLLRG
Trigger: TCCCCGGAGGAGGGACCCCCATACAGACCCGAGTTC...GGAAAGAACATTCCAAGTCATGGTTCTACCAAGCAGTGGGGGCTCAGACTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CCA 90 bp CCAGGATCCCAAGCACCAGACTTGGGCTCTTCTTCAAAACCCAAAGGTCCAATTCCATTGACAGCGACCTaGGGGGCGCTTTGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: PGSQAPDLGSSSKPKGPIPLTAT*GALCCR
Trigger: CCGGCAGCAAAGCGCCCCCCAGGTCGCTGTCAATGG...AATTGGACCTTTGGGTTTTGAAGAAGAGCCCAAGTCTGGTGCTTGGGATCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CCA 90 bp AGCCAGTCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCCTGAGGCTCAGATTCTaGCTCCAAGTCTCGGTGACC +
Preference number: 4 (lower is better)
Translates to: SQSRSSPEGLQQGSLSLSLRLRF*LQVSVT
Trigger: GGTCACCGAGACTTGGAGCCAGAATCTGAGCCTCAG...GGACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGACTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp ATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCAGGGCCGGAGCAGATTaGCCATCCTTCAGAAGATCG +
Preference number: 4 (lower is better)
Translates to: MGEDQGRSRLAILQKIDFRAGAD*PSFRRS
Trigger: CGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCT...GAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp CCTCTCGGGGGTCTGCTAGCGCTTTCCGTAGACTGTCTCCACGCCCTCCCCACTAGGCTGTTTATAGGCTaGGCCGCATATTACAATGCT +
Preference number: 4 (lower is better)
Translates to: PLGGLLALSVDCLHALPTRLFIG*AAYYNA
Trigger: AGCATTGTAATATGCGGCCCAGCCTATAAACAGCCT...AGTGGGGAGGGCGTGGAGACAGTCTACGGAAAGCGCTAGCAGACCCCCGAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000586329.5
CDS-3UTR CCA 90 bp CCCTTAGGCCCAGGAATCCGGGTCTCCATTCCCAACTCCCTTAGCCCCAGAAGTGTGCTTCCCAGGCCCTaGGAAAACAAACTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PLGPGIRVSIPNSLSPRSVLPRP*ENKLAS
Trigger: AGAAGCCAGTTTGTTTTCCCAGGGCCTGGGAAGCAC...ACTTCTGGGGCTAAGGGAGTTGGGAATGGAGACCCGGATTCCTGGGCCTAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR TCA 90 bp AAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCACGTCACCAGGTGATTaGCTGGGTACTGGGATACAT +
Preference number: 4 (lower is better)
Translates to: KIDFRYWGESEESVLPRGTSPGD*LGTGIH
Trigger: ATGTATCCCAGTACCCAGTCAATCACCTGGTGACGT...GCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000201647.11
CDS-3UTR TCA 90 bp TGGGTCTCCAGGATCCCAAGCACCAGACTTGGGCTCTTCTTCAAAACCCAAAGGGTCTCTGACTCCAGCTaGGGCTCAGATTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: WVSRIPSTRLGLFFKTQRVSDSS*GSDSGS
Trigger: GGAGCCAGAATCTGAGCCTCAGCTGGAGTCAGAGAC...CCTTTGGGTTTTGAAGAAGAGCCCAAGTCTGGTGCTTGGGATCCTGGAGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR TCA 90 bp TCCCAGCCAGTCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTTTTTCCTGCTGTCTCTaGCTCCAGCTGAGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: SQPVQILSGGTAARIVKSFSCCL*LQLRLR
Trigger: TCTGAGCCTCAGCTGGAGTCAGAGACAGCAGGAAAA...AGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGACTGGCTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR TCA 90 bp AGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGCACTGCCTCCAGCTCTaGCACTTTCTCTTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: RRSTSAIGESLRSPFSHGHCLQL*HFLFVL
Trigger: GAGGACAAAGAGAAAGTGTCAGAGCTGGAGGCAGTG...CCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR TCA 90 bp CCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTCCGTTCGCCTGGCAGGTCAAATaGCCTCCATTTCCACCTCGC +
Preference number: 4 (lower is better)
Translates to: PSFRRSTSAIGESLRSPFAWQVK*PPFPPR
Trigger: GCGAGGTGGAAATGGAGGTCATTTGACCTGCCAGGC...GAACGGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR TCA 90 bp GGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGCTTCATGTTCTATCTTaGCCCTGGGTCCAATCTCAA +
Preference number: 4 (lower is better)
Translates to: GESLRSPFSHGASSLFAKLHVLS*PWVQSQ
Trigger: TTGAGATTGGACCCAGGGTCAAGATAGAACATGAAG...CTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245618.5
ENST00000588359.5
CDS-3UTR GCA 90 bp TGGGTCTCCAGGATCCCAAGCACCAGACTTGGGCTCTTCTTCAAAACCCAAAGGGCCTCCGCCGACTTCTaGAGCCTCGATACAAAGCTC +
Preference number: 4 (lower is better)
Translates to: WVSRIPSTRLGLFFKTQRASADF*SLDTKL
Trigger: GAGCTTTGTATCGAGGCTGCAGAAGTCGGCGGAGGC...CCTTTGGGTTTTGAAGAAGAGCCCAAGTCTGGTGCTTGGGATCCTGGAGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR GCA 90 bp CAGTCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCACCGCGTACTTGATCTTCTaGAGCACGTCGGTGTACTCG +
Preference number: 4 (lower is better)
Translates to: QSRSSPEGLQQGSLSLSTAYLIF*STSVYS
Trigger: CGAGTACACCGACGTGCTGCAGAAGATCAAGTACGC...GGTGGACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp ATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCGCGTACTTGATCTTCTaGAGCACGTCGGTGTACTCG +
Preference number: 4 (lower is better)
Translates to: MGEDQGRSRLAILQKIDFAYLIF*STSVYS
Trigger: CGAGTACACCGACGTGCTGCAGAAGATCAAGTACGC...GAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp TCCAGGATCCCAAGCACCAGACTTGGGCTCTTCTTCAAAACCCAAAGGTCCAATGCATCCGATGTCAGATaGGGCCGCCGCACACTGCTC +
Preference number: 4 (lower is better)
Translates to: SRIPSTRLGLFFKTQRSNASDVR*GRRTLL
Trigger: GAGCAGTGTGCGGCGGCCGCATCTGACATCGGATGC...ATTGGACCTTTGGGTTTTGAAGAAGAGCCCAAGTCTGGTGCTTGGGATCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR GCA 90 bp GCTGTTTATAGGCTGGGCCGCATATTACAATGCTCAGGGCTCCACTGCACCCTCGGCCGCATATTACAATaGTCAGGGCTCCACTGCACC +
Preference number: 4 (lower is better)
Translates to: AVYRLGRILQCSGLHCTLGRILQ*SGLHCT
Trigger: GGTGCAGTGGAGCCCTGAGCATTGTAATATGCGGCC...GAGGGTGCAGTGGAGCCCTGAGCATTGTAATATGCGGCCCAGCCTATAAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000586329.5
CDS-3UTR GCA 90 bp TTCGTCTCCTCCCACGTTGCTTCCCTCCAGTCTGCCCTCTATTTGCTCAAGGACTTGAAGTCCCAAGCCTaGTCCTCTGGGTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: FVSSHVASLQSALYLLKDLKSQA*SSGSPG
Trigger: TCCTGGAGACCCAGAGGAGCAGGCTTGGGACTTCAA...GTCCTTGAGCAAATAGAGGGCAGACTGGAGGGAAGCAACGTGGGAGGAGACGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CCA 90 bp CAGGCATGGTGCTTCCCAGGCCCTGGGAAAACAAACTGGCTTCTTCCAGCCTTTGATAGACTTGGCGCTTaGCTTTGGGGCAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: QAWCFPGPGKTNWLLPAFDRLGA*LWGSFW
Trigger: CCAGAAGCTGCCCCAAAGCCAAGCGCCAAGTCTATC...AAAGGCTGGAAGAAGCCAGTTTGTTTTCCCAGGGCCTGGGAAGCACCATGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CCA 90 bp CCCTCAAACCTTTTAACCCAGTCCGACACCCAGCAGCGACTTAGACAATTGCATCACGATGGCGCCCAGTaGGTACGACTCCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PSNLLTQSDTQQRLRQLHHDGAQ*VRLQLL
Trigger: GAGGAGCTGGAGTCGTACCCACTGGGCGCCATCGTG...ATGCAATTGTCTAAGTCGCTGCTGGGTGTCGGACTGGGTTAAAAGGTTTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CCA 90 bp GCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGCTCAGATTCTaGCTCCAAGTCTCGGTGACC +
Preference number: 4 (lower is better)
Translates to: AGADWPSFRRSTSAIGESLRLRF*LQVSVT
Trigger: GGTCACCGAGACTTGGAGCCAGAATCTGAGCCTCAG...ACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp AGCCAGTCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCATCGACTTCCGCTATTaGGGAGAGTCTGAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SQSRSSPEGLQQGSLSLSIDFRY*GESEES
Trigger: GGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGAT...GGACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGACTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR TCA 90 bp CGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTCTTCATGTTCTATCTTaGCCCTGGGTCCAATCTCAA +
Preference number: 4 (lower is better)
Translates to: RYWGESEESVLPRGLVTLLHVLS*PWVQSQ
Trigger: TTGAGATTGGACCCAGGGTCAAGATAGAACATGAAG...AAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245618.5
ENST00000588359.5
CDS-3UTR GCA 90 bp AGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGGCCTCCGCCGACTTCTaGAGCCTCGATACAAAGCTC +
Preference number: 4 (lower is better)
Translates to: RLAILQKIDFRYWGESEEASADF*SLDTKL
Trigger: GAGCTTTGTATCGAGGCTGCAGAAGTCGGCGGAGGC...CTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp CCCTCAAACCTTTTAACCCAGTCCGACACCCAGCAGCGACTTAGACAATTGCATCGTCTCCTCCCACGTTaGTTCCCTCCAGTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: PSNLLTQSDTQQRLRQLHRLLPR*FPPVCP
Trigger: AGGGCAGACTGGAGGGAAGCAACGTGGGAGGAGACG...ATGCAATTGTCTAAGTCGCTGCTGGGTGTCGGACTGGGTTAAAAGGTTTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR GCA 90 bp GCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGTGGCCTTTCTTCCCATaGGTGCTGCAAGGGAGGACA +
Preference number: 4 (lower is better)
Translates to: ADWPSFRRSTSAIGESLRWPFFP*VLQGRT
Trigger: TGTCCTCCCTTGCAGCACGCATGGGAAGAAAGGCCA...CCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586329.5
CDS-3UTR CCA 90 bp CAGCCAGTCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCACCAGGTGATTGACTaGGTACTGGGATACATCAGC +
Preference number: 4 (lower is better)
Translates to: QPVQILSGGTAARIVKSVHQVID*VLGYIS
Trigger: GCTGATGTATCCCAGTACCCAGTCAATCACCTGGTG...GACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGACTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000201647.11
CDS-3UTR CCA 90 bp AGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGCCCCCAGATCCTTCTTaGCCATGTTCTGTTCATGTC +
Preference number: 4 (lower is better)
Translates to: RAGADWPSFRRSTSAIGEPPDPS*PCSVHV
Trigger: GACATGAACAGAACATGGCCAAGAAGGATCTGGGGG...CTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000245618.5
3UTR CAA 72 bp TCCAGCCTCACTGCTTTGTTTTCGTCTCCTCCCACGTaGCTTCCCTCCAGTCTGCCCTCTATTTGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: SSLTALFSSPPT*LPSSLPSICSR
Trigger: CCTTGAGCAAATAGAGGGCAGACTGGAGGGAAGCAACGTGGGAGGAGACGAAAACAAAGCAGTGAGGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR TCA 90 bp GCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGGGCCAGGAATCACCTTaGAGGATGAGTTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: ADWPSFRRSTSAIGESLRGQESP*RMSLTA
Trigger: GGCTGTCAAACTCATCCTTCAAGGTGATTCCTGGCC...CCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586329.5
CDS-3UTR GCA 90 bp TGGCTTCTTCCAGCCTTTTGGGGATCCAGGGATCCAACCTCTCAGACTTTACCCGCGTACTTGATCTTCTaGAGCACGTCGGTGTACTCG +
Preference number: 4 (lower is better)
Translates to: WLLPAFWGSRDPTSQTLPAYLIF*STSVYS
Trigger: CGAGTACACCGACGTGCTGCAGAAGATCAAGTACGC...GGGTAAAGTCTGAGAGGTTGGATCCCTGGATCCCCAAAAGGCTGGAAGAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR GCA 90 bp AGCCAGTCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCGTGTTCACAATCATCTaGAGAGGCCCGAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: SQSRSSPEGLQQGSLSLSVFTII*RGPKRK
Trigger: CTTCCTTTTCGGGCCTCTGCAGATGATTGTGAACAC...GGACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGACTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp TCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCACGTCGTCGAACACGTaGTTCAGGATGTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: SFRRSTSAIGESLRSPFSTSSNT*FRMSTS
Trigger: GGAAGTGGACATCCTGAACCACGTGTTCGACGACGT...GGAGAACGGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp GAGTTTAATCGTCCAGCCTTTACCCCTCTCGGGGGCCCAGAGATACTACCACTTACGTCGTCGAACACGTaGTTCAGGATGTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: EFNRPAFTPLGGPEILPLTSSNT*FRMSTS
Trigger: GGAAGTGGACATCCTGAACCACGTGTTCGACGACGT...AAGTGGTAGTATCTCTGGGCCCCCGAGAGGGGTAAAGGCTGGACGATTAAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CCA 90 bp GTTGCTTCCCTCCAGTCTGCCCTCTATTTGCTCAAGGACCCTAGAGTTCTAGTCGAGCTCGTTTTCACGTaGAGTGACGTTGTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: VASLQSALYLLKDPRVLVELVFT*SDVVPQ
Trigger: CTGCGGGACAACGTCACTCCACGTGAAAACGAGCTC...GACTAGAACTCTAGGGTCCTTGAGCAAATAGAGGGCAGACTGGAGGGAAGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CCA 90 bp TCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCACCGGGTTGACGATGAGCATCTaGGAGAATTTCTCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: SRSSPEGLQQGSLSLSTGLTMSI*ENFSFS
Trigger: CGAGAAGGAGAAATTCTCCCAGATGCTCATCGTCAA...CCCGGTGGACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR CCA 90 bp GCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTTTGACGATGAGCATCTaGGAGAATTTCTCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: AIGESLRSPFSHGASSLFLTMSI*ENFSFS
Trigger: CGAGAAGGAGAAATTCTCCCAGATGCTCATCGTCAA...AAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR CCA 90 bp AGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGCAATGGCGAGGACGATaGCCTTTCTTCCCATGCGTG +
Preference number: 4 (lower is better)
Translates to: RLAILQKIDFRYWGESEEQWRGR*PFFPCV
Trigger: CACGCATGGGAAGAAAGGCCATCGTCCTCGCCATTG...CTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586329.5
CDS-3UTR TCA 90 bp AGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGCACTGCCTCCAGCTCTaGCACTTTCTCTTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: RLAILQKIDFRYWGESEEHCLQL*HFLFVL
Trigger: GAGGACAAAGAGAAAGTGTCAGAGCTGGAGGCAGTG...CTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp GATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTGCGTACTTGATCTTCTaGAGCACGTCGGTGTACTCG +
Preference number: 4 (lower is better)
Translates to: DWPSFRRSTSAIGESLRSAYLIF*STSVYS
Trigger: CGAGTACACCGACGTGCTGCAGAAGATCAAGTACGC...ACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp AGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGACGTCGTCGAACACGTaGTTCAGGATGTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: SRLAILQKIDFRYWGESETSSNT*FRMSTS
Trigger: GGAAGTGGACATCCTGAACCACGTGTTCGACGACGT...CTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CCA 90 bp CTGTCTCTGACTCCAGCTGAGGCTCAGATTCTGGCTCCAAGTCTCGGTGACTGTAAACATGTGAAGGCCTaGCCAGTAGGAGCCTCTAAT +
Preference number: 4 (lower is better)
Translates to: LSLTPAEAQILAPSLGDCKHVKA*PVGASN
Trigger: ATTAGAGGCTCCTACTGGCCAGGCCTTCACATGTTT...ACAGTCACCGAGACTTGGAGCCAGAATCTGAGCCTCAGCTGGAGTCAGAGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CCA 90 bp CAGGCATGGTGCTTCCCAGGCCCTGGGAAAACAAACTGGCTTCTTCCAGCCTTTCCTGGGAAAACAAACTaGCTTCTTCCAGCCTTTTGG +
Preference number: 4 (lower is better)
Translates to: QAWCFPGPGKTNWLLPAFPGKTN*LLPAFW
Trigger: CCAAAAGGCTGGAAGAAGCCAGTTTGTTTTCCCAGG...AAAGGCTGGAAGAAGCCAGTTTGTTTTCCCAGGGCCTGGGAAGCACCATGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CCA 90 bp GAGTCTGAGCCCCCACTGCTTGGTAGAACCATGACTTGGAATGTTCTTTCCTCCCTGAGGCTCAGATTCTaGCTCCAAGTCTCGGTGACT +
Preference number: 4 (lower is better)
Translates to: ESEPPLLGRTMTWNVLSSLRLRF*LQVSVT
Trigger: AGTCACCGAGACTTGGAGCCAGAATCTGAGCCTCAG...GGAGGAAAGAACATTCCAAGTCATGGTTCTACCAAGCAGTGGGGGCTCAGACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR GCA 90 bp TCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCGTGTTCACAATCATCTaGAGAGGCCCGAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: SFRRSTSAIGESLRSPFSVFTII*RGPKRK
Trigger: CTTCCTTTTCGGGCCTCTGCAGATGATTGTGAACAC...GGAGAACGGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR GCA 90 bp TGGGTCTCCAGGATCCCAAGCACCAGACTTGGGCTCTTCTTCAAAACCCAAAGGGTGTTCACAATCATCTaGAGAGGCCCGAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: WVSRIPSTRLGLFFKTQRVFTII*RGPKRK
Trigger: CTTCCTTTTCGGGCCTCTGCAGATGATTGTGAACAC...CCTTTGGGTTTTGAAGAAGAGCCCAAGTCTGGTGCTTGGGATCCTGGAGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR GCA 90 bp CCAGAGTCTGAGCCCCCACTGCTTGGTAGAACCATGACTTGGAATGTTCTTTCCAGTCTGCCCTCTATTTaGTCAAGGACCCTAGAGTTC +
Preference number: 4 (lower is better)
Translates to: PESEPPLLGRTMTWNVLSSLPSI*SRTLEF
Trigger: GAACTCTAGGGTCCTTGAGCAAATAGAGGGCAGACT...GGAAAGAACATTCCAAGTCATGGTTCTACCAAGCAGTGGGGGCTCAGACTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CCA 90 bp TTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACAGGCTGTTTATAGGCTaGGCCGCATATTACAATGCT +
Preference number: 4 (lower is better)
Translates to: FRRSTSAIGESLRSPFSHRLFIG*AAYYNA
Trigger: AGCATTGTAATATGCGGCCCAGCCTATAAACAGCCT...GTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000586329.5
CDS-3UTR CCA 90 bp GTTGCTTCCCTCCAGTCTGCCCTCTATTTGCTCAAGGACCCTAGAGTTCTAGTCGGTAGAACCATGACTTaGAATGTTCTTTCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: VASLQSALYLLKDPRVLVGRTMT*NVLSSP
Trigger: GGGGGAGGAAAGAACATTCCAAGTCATGGTTCTACC...GACTAGAACTCTAGGGTCCTTGAGCAAATAGAGGGCAGACTGGAGGGAAGCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CCA 90 bp AGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTTGACGATGAGCATCTaGGAGAATTTCTCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: RLAILQKIDFRYWGESEELTMSI*ENFSFS
Trigger: CGAGAAGGAGAAATTCTCCCAGATGCTCATCGTCAA...CTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR CCA 90 bp AGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGAGGCTGTTTATAGGCTaGGCCGCATATTACAATGCT +
Preference number: 4 (lower is better)
Translates to: SRLAILQKIDFRYWGESERLFIG*AAYYNA
Trigger: AGCATTGTAATATGCGGCCCAGCCTATAAACAGCCT...CTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000586329.5
CDS-3UTR TCA 90 bp GTTGCTTCCCTCCAGTCTGCCCTCTATTTGCTCAAGGACCCTAGAGTTCTAGTCTGCTTGGTAGAACCATaGCTTGGAATGTTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: VASLQSALYLLKDPRVLVCLVEP*LGMFFP
Trigger: AGGAAAGAACATTCCAAGTCATGGTTCTACCAAGCA...GACTAGAACTCTAGGGTCCTTGAGCAAATAGAGGGCAGACTGGAGGGAAGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS GCA 90 bp TGCAGCCAGGCGCGGACCTCGGAGGCGTCCGAGCCCGGGCTGAGCTaGGGTTCCGGGGCGCGGGGCCCTGGGACTGCGCGGCTCGGTCCC +
Preference number: 5 (lower is better)
Translates to: CSQARTSEASEPGLS*GSGARGPGTARLGP
Trigger: GGGACCGAGCCGCGCAGTCCCAGGGCCCCGCGCCCCGGAACCGCAGCTCAGCCCGGGCTCGGACGCCTCCGAGGTCCGCGCCTGGCTGCA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000587901.1
ENST00000588359.5
ENST00000589362.5
ENST00000592102.5
CDS CCA 90 bp GGGGCGCGGGGCCCTGGGACTGCGCGGCTCGGTCCCGAGCGGCCCTaGGCCAGGCGCGCCTGCAGTTCCTCGTTGACGATGAGCATCTGG +
Preference number: 5 (lower is better)
Translates to: GARGPGTARLGPERP*ARRACSSSLTMSIW
Trigger: CCAGATGCTCATCGTCAACGAGGAACTGCAGGCGCGCCTGGCCCAGGGCCGCTCGGGACCGAGCCGCGCAGTCCCAGGGCCCCGCGCCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
ENST00000589362.5
ENST00000592102.5
CDS TCA 90 bp AGAAAAGCTGCGCCCCGGTCAGCACACCCAGCGCGTCCACGGTCCTaGGCGAGGGCAGCCCGGGCGCGGTCAGGCCGGTCGGCGGATGCC +
Preference number: 5 (lower is better)
Translates to: RKAAPRSAHPARPRS*ARAARARSGRSADA
Trigger: GGCATCCGCCGACCGGCCTGACCGCGCCCGGGCTGCCCTCGCTCAGGACCGTGGACGCGCTGGGTGTGCTGACCGGGGCGCAGCTTTTCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587715.1
CDS GCA 90 bp GTCCTGAGCGAGGGCAGCCCGGGCGCGGTCAGGCCGGTCGGCGGATaGCCCAGCCCGGACAATCATGTCACGCCCACCCGGCGATGGTCC +
Preference number: 5 (lower is better)
Translates to: VLSEGSPGAVRPVGG*PSPDNHVTPTRRWS
Trigger: GGACCATCGCCGGGTGGGCGTGACATGATTGTCCGGGCTGGGGCATCCGCCGACCGGCCTGACCGCGCCCGGGCTGCCCTCGCTCAGGAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587715.1
CDS GCA 90 bp GGCGGGGTCTCAGCGGCGGGCGAGCGGTCGCGCTGCAACTCCTCCTaGGTGGCCCTGCGGAGGGCGACGGGGACACCAAGACTGGGTCCA +
Preference number: 5 (lower is better)
Translates to: GGVSAAGERSRCNSS*VALRRATGTPRLGP
Trigger: TGGACCCAGTCTTGGTGTCCCCGTCGCCCTCCGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCCCGCCGCTGAGACCCCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590232.1
CDS GCA 90 bp GAGGCCGAGTCAGCGTTGCTCGAGGTCCCCACCGGCTCAGGCCTCTaGGCCTCCTCTGCCTCGGGAATGGGCTTCGCCTGGGGTCGTCCG +
Preference number: 5 (lower is better)
Translates to: EAESALLEVPTGSGL*ASSASGMGFAWGRP
Trigger: CGGACGACCCCAGGCGAAGCCCATTCCCGAGGCAGAGGAGGCGCAGAGGCCTGAGCCGGTGGGGACCTCGAGCAACGCTGACTCGGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000590232.1
ENST00000592824.5
CDS CCA 90 bp CGGCCGCGCCCCCGGACTTCCCAGCCTCGGCCCTGCTGTGTCGCTTaGGTCACCTGCCGGCGCCTCCGCTCGTGCTGTAGCTGTTTCTCA +
Preference number: 5 (lower is better)
Translates to: RPRPRTSQPRPCCVA*VTCRRLRSCCSCFS
Trigger: TGAGAAACAGCTACAGCACGAGCGGAGGCGCCGGCAGGTGACCCAAGCGACACAGCAGGGCCGAGGCTGGGAAGTCCGGGGGCGCGGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000586329.5
ENST00000588359.5
ENST00000589362.5
ENST00000592102.5
CDS CCA 90 bp CCCTCGCCCTACACCTGTCCCTGCCCTAAGCCACGACCCCGCCCATaGAGACCCAGTCCGGGTGGTTCCTCGCCCCCACCTCGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: PSPYTCPCPKPRPRP*RPSPGGSSPPPRPG
Trigger: GCCAGGACGAGGTGGGGGCGAGGAACCACCCGGACTGGGTCTCCATGGGCGGGGTCGTGGCTTAGGGCAGGGACAGGTGTAGGGCGAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592044.1
CDS-3UTR CAA 90 bp CTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGGAGGGGTCGGCGATGTaGCCGCGCAGCCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: LRSPFSHGASSLFAKGAWEGSAM*PRSRAS
Trigger: GCTGGCCCGGCTGCGCGGCAACATCGCCGACCCCTC...CCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS GCA 90 bp GGGCTCTGCCAAGGCCAGGAGAGGCTGCTGAGGGTCAGGACAGGCTaGCTGGAGGAGGAGGACAGGCTGCCTGGAGGAGGAGGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: GLCQGQERLLRVRTG*LEEEDRLPGGGGQA
Trigger: GGCCTGCCCTCCTCCTCCAGGCAGCCTGTCCTCCTCCTCCAGGCAGCCTGTCCTGACCCTCAGCAGCCTCTCCTGGCCTTGGCAGAGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586329.5
CDS CCA 90 bp ACGAGCGGCTCCTGCCGGGTGGCATCACCGCGTCACAGCGCACGATaGCGCCCAGTGGGTACGACTCCAGCTCCTCCTTGGAGGCCGGGT +
Preference number: 5 (lower is better)
Translates to: TSGSCRVASPRHSAR*RPVGTTPAPPWRPG
Trigger: ACCCGGCCTCCAAGGAGGAGCTGGAGTCGTACCCACTGGGCGCCATCGTGCGCTGTGACGCGGTGATGCCACCCGGCAGGAGCCGCTCGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000591219.5
ENST00000592824.5
CDS GCA 90 bp GGAGTGACGTTGTCCCGCAGCAGCGCCACGGCATCCGATGTCAGATaGGGCCGCCGCACACTGCTCGCGAACCCCACCTCGTCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: GVTLSRSSATASDVR*GRRTLLANPTSSWL
Trigger: CAGCCAGGACGAGGTGGGGTTCGCGAGCAGTGTGCGGCGGCCGCATCTGACATCGGATGCCGTGGCGCTGCTGCGGGACAACGTCACTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588359.5
CDS CCA 90 bp GGGTTCCTGGCACACGAGCAGCAGCAACGAGCGGCTCCTGCCGGGTaGCATCACCGCGTCACAGCGCACGATGGCGCCCAGTGGGTACGA +
Preference number: 5 (lower is better)
Translates to: GFLAHEQQQRAAPAG*HHRVTAHDGAQWVR
Trigger: TCGTACCCACTGGGCGCCATCGTGCGCTGTGACGCGGTGATGCCACCCGGCAGGAGCCGCTCGTTGCTGCTGCTCGTGTGCCAGGAACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000591219.5
ENST00000592824.5
CDS-3UTR CAA 90 bp GAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCAGAGGCCGAGTCAGCGTaGCTCGAGGTCCCCACCGGC +
Preference number: 5 (lower is better)
Translates to: EESVLPRGLVTLCEGRLAEAESA*LEVPTG
Trigger: GCCGGTGGGGACCTCGAGCAACGCTGACTCGGCCTC...TGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CAA 90 bp CTCGGGGGTCTGCTAGCGCTTTCCGTAGACTGTCTCCACGCCCTCCCCACTCCCCCGGAGCTAAAGCCCTaGGCCTGCAGCCAGGCGCGG +
Preference number: 5 (lower is better)
Translates to: LGGLLALSVDCLHALPTPPELKP*ACSQAR
Trigger: CCGCGCCTGGCTGCAGGCCAAGGGCTTTAGCTCCGG...GGGAGTGGGGAGGGCGTGGAGACAGTCTACGGAAAGCGCTAGCAGACCCCCGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000201647.11
ENST00000245618.5
CDS GCA 90 bp CCCCGGACTTCCCAGCCTCGGCCCTGCTGTGTCGCTTGGGTCACCTaGCGGCGCCTCCGCTCGTGCTGTAGCTGTTTCTCAACTGGGTCC +
Preference number: 5 (lower is better)
Translates to: PRTSQPRPCCVAWVT*RRLRSCCSCFSTGS
Trigger: GGACCCAGTTGAGAAACAGCTACAGCACGAGCGGAGGCGCCGGCAGGTGACCCAAGCGACACAGCAGGGCCGAGGCTGGGAAGTCCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586329.5
ENST00000588359.5
ENST00000589362.5
ENST00000592102.5
CDS-3UTR CAA 90 bp AGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCCCGGAGCTAAAGCCCTaGGCCTGCAGCCAGGCGCGG +
Preference number: 5 (lower is better)
Translates to: SLRSPFSHGASSLFAKGAPELKP*ACSQAR
Trigger: CCGCGCCTGGCTGCAGGCCAAGGGCTTTAGCTCCGG...GGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR CAA 90 bp TCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGCCGGAGCTAAAGCCCTaGGCCTGCAGCCAGGCGCGG +
Preference number: 5 (lower is better)
Translates to: SEESVLPRGLVTLCEGRLPELKP*ACSQAR
Trigger: CCGCGCCTGGCTGCAGGCCAAGGGCTTTAGCTCCGG...CAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS TCA 90 bp CCCAGGCAGAACGTCACCAGGTGCCTGTGGCGGTGCTCATGGTGCTaGGTGGTAGCTCCTGCCCACCTGGAGGTGCCCTGCCTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: PRQNVTRCLWRCSWC*VVAPAHLEVPCLLR
Trigger: CCTGAGCAGGCAGGGCACCTCCAGGTGGGCAGGAGCTACCACTCAGCACCATGAGCACCGCCACAGGCACCTGGTGACGTTCTGCCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540810.5
CDS GCA 90 bp GGGACTGCGCGGCTCGGTCCCGAGCGGCCCTGGGCCAGGCGCGCCTaGAGTTCCTCGTTGACGATGAGCATCTGGGAGAATTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: GTARLGPERPWARRA*SSSLTMSIWENFSF
Trigger: GAAGGAGAAATTCTCCCAGATGCTCATCGTCAACGAGGAACTGCAGGCGCGCCTGGCCCAGGGCCGCTCGGGACCGAGCCGCGCAGTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
ENST00000589362.5
ENST00000592102.5
CDS CCA 90 bp GACACTTTCTCTTTGTCCTCCAGCAGCGAGCGCTGCACGGTGACCTaGCTGTACACACGTGCCCCCTCCTCGGGGCTCACCGCCCGCAGC +
Preference number: 5 (lower is better)
Translates to: DTFSLSSSSERCTVT*LYTRAPSSGLTARS
Trigger: GCTGCGGGCGGTGAGCCCCGAGGAGGGGGCACGTGTGTACAGCCAGGTCACCGTGCAGCGCTCGCTGCTGGAGGACAAAGAGAAAGTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000587715.1
ENST00000587901.1
ENST00000588359.5
ENST00000589362.5
ENST00000592102.5
CDS-3UTR CAA 90 bp ATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGGCCTCCGAGGGCGGCTaGGCCCGCAGCGTCAGCAAG +
Preference number: 5 (lower is better)
Translates to: IGESLRSPFSHGASSLFAASEGG*ARSVSK
Trigger: CTTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGGC...CGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CAA 90 bp CCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGGAGGGGTCGGCGATGTaGCCGCGCAGCCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: PGPEQIGHPSEDRLPLLGEGSAM*PRSRAS
Trigger: GCTGGCCCGGCTGCGCGGCAACATCGCCGACCCCTC...CCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CAA 90 bp GAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCATCACGTGGAGTGACGTaGTCCCGCAGCAGCGCCACG +
Preference number: 5 (lower is better)
Translates to: EESVLPRGLVTLCEGRLASRGVT*SRSSAT
Trigger: CGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGA...TGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR CAA 90 bp GGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCCGGAGCTAAAGCCCTaGGCCTGCAGCCAGGCGCGG +
Preference number: 5 (lower is better)
Translates to: GESEESVLPRGLVTLCEGPELKP*ACSQAR
Trigger: CCGCGCCTGGCTGCAGGCCAAGGGCTTTAGCTCCGG...CCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR CAA 90 bp TCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGGGCCTCGTCACTCTTaGCGAAGGGCGCCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: SEESVLPRGLVTLCEGRLGPRHS*RRAPGR
Trigger: CCTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCC...CAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR CAA 90 bp AGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCGGGCCTCGTCACTCTTaGCGAAGGGCGCCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: SLRSPFSHGASSLFAKGAGPRHS*RRAPGR
Trigger: CCTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCC...GGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS TCA 90 bp GCTCTGACACTTTCTCTTTGTCCTCCAGCAGCGAGCGCTGCACGGTaGCCTGGCTGTACACACGTGCCCCCTCCTCGGGGCTCACCGCCC +
Preference number: 5 (lower is better)
Translates to: ALTLSLCPPAASAAR*PGCTHVPPPRGSPP
Trigger: GGGCGGTGAGCCCCGAGGAGGGGGCACGTGTGTACAGCCAGGTCACCGTGCAGCGCTCGCTGCTGGAGGACAAAGAGAAAGTGTCAGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000587715.1
ENST00000587901.1
ENST00000588359.5
ENST00000589362.5
ENST00000592102.5
CDS GCA 90 bp TCGTGCTGTAGCTGTTTCTCAACTGGGTCCTCCCAGGCGCGGCTCTaGGGGTCAGTGACCGGCGGCTCCCAGCCGCTGAAGAACTCGGGT +
Preference number: 5 (lower is better)
Translates to: SCCSCFSTGSSQARL*GSVTGGSQPLKNSG
Trigger: ACCCGAGTTCTTCAGCGGCTGGGAGCCGCCGGTCACTGACCCGCAGAGCCGCGCCTGGGAGGACCCAGTTGAGAAACAGCTACAGCACGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000588359.5
ENST00000589362.5
ENST00000592102.5
ENST00000592824.5
CDS CCA 90 bp GCGGGTCCACGAGTCCCCCAGCGAGGTCCAGAGCTCGTTTTCACGTaGAGTGACGTTGTCCCGCAGCAGCGCCACGGCATCCGATGTCAG +
Preference number: 5 (lower is better)
Translates to: AGPRVPQRGPELVFT*SDVVPQQRHGIRCQ
Trigger: CTGACATCGGATGCCGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGACCTCGCTGGGGGACTCGTGGACCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000588359.5
ENST00000589362.5
ENST00000590610.5
ENST00000592102.5
ENST00000592284.5
ENST00000592824.5
CDS CCA 90 bp GGCGGATGCCCCAGCCCGGACAATCATGTCACGCCCACCCGGCGATaGTCCAATCAGAACAGCATTCTAGCTCTAGCGGGGGCAGGCCCG +
Preference number: 5 (lower is better)
Translates to: GGCPSPDNHVTPTRR*SNQNSILALAGAGP
Trigger: CGGGCCTGCCCCCGCTAGAGCTAGAATGCTGTTCTGATTGGACCATCGCCGGGTGGGCGTGACATGATTGTCCGGGCTGGGGCATCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587715.1
CDS-3UTR CAA 90 bp ATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGGAGGCCGAGTCAGCGTaGCTCGAGGTCCCCACCGGC +
Preference number: 5 (lower is better)
Translates to: IGESLRSPFSHGASSLFAEAESA*LEVPTG
Trigger: GCCGGTGGGGACCTCGAGCAACGCTGACTCGGCCTC...CGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CAA 90 bp GCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCCTCCGAGGGCGGCTaGGCCCGCAGCGTCAGCAAG +
Preference number: 5 (lower is better)
Translates to: AIGESLRSPFSHGASSLFASEGG*ARSVSK
Trigger: CTTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGGC...AAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CAA 90 bp AGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGGAGGGGTCGGCGATGTaGCCGCGCAGCCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: RAGADWPSFRRSTSAIGEEGSAM*PRSRAS
Trigger: GCTGGCCCGGCTGCGCGGCAACATCGCCGACCCCTC...CTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CAA 90 bp CTCGGGGGTCTGCTAGCGCTTTCCGTAGACTGTCTCCACGCCCTCCCCACTCCCCTGGGGTCCAAGCCGTaGAGGCTATCGCAGCTGTCC +
Preference number: 5 (lower is better)
Translates to: LGGLLALSVDCLHALPTPLGSKP*RLSQLS
Trigger: GGACAGCTGCGATAGCCTCAACGGCTTGGACCCCAG...GGGAGTGGGGAGGGCGTGGAGACAGTCTACGGAAAGCGCTAGCAGACCCCCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000201647.11
ENST00000245618.5
CDS-3UTR CAA 90 bp ACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGCCCTGCTGTGTCGCTaGGGTCACCTGCCGGCGCCT +
Preference number: 5 (lower is better)
Translates to: TGMGEDQGRSRLAILQKIALLCR*GHLPAP
Trigger: AGGCGCCGGCAGGTGACCCAAGCGACACAGCAGGGC...GATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586329.5
CDS-3UTR CAA 90 bp CGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTGCCCTGCTGTGTCGCTaGGGTCACCTGCCGGCGCCT +
Preference number: 5 (lower is better)
Translates to: RYWGESEESVLPRGLVTLALLCR*GHLPAP
Trigger: AGGCGCCGGCAGGTGACCCAAGCGACACAGCAGGGC...AAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586329.5
ENST00000588359.5
CDS TCA 90 bp GTGGGTACGACTCCAGCTCCTCCTTGGAGGCCGGGTCGAGCAGCGTaGCATGGTCGGGAGACACTCGCAGCAGCATCTCCTGTGCCCAGA +
Preference number: 5 (lower is better)
Translates to: VGTTPAPPWRPGRAA*HGRETLAAASPVPR
Trigger: TCTGGGCACAGGAGATGCTGCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGGCCTCCAAGGAGGAGCTGGAGTCGTACCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000591219.5
ENST00000592318.1
ENST00000592824.5
CDS CCA 90 bp TACGACTCCAGCTCCTCCTTGGAGGCCGGGTCGAGCAGCGTGACATaGTCGGGAGACACTCGCAGCAGCATCTCCTGTGCCCAGACTCGG +
Preference number: 5 (lower is better)
Translates to: YDSSSSLEAGSSSVT*SGDTRSSISCAQTR
Trigger: CCGAGTCTGGGCACAGGAGATGCTGCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGGCCTCCAAGGAGGAGCTGGAGTCGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000591219.5
ENST00000592318.1
ENST00000592824.5
CDS-3UTR CAA 90 bp TCCAGCCTCACTGCTTTGTTTTCGTCTCCTCCCACGTTGCTTCCCTCCAGTCTGGAGGGGTCGGCGATGTaGCCGCGCAGCCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: SSLTALFSSPPTLLPSSLEGSAM*PRSRAS
Trigger: GCTGGCCCGGCTGCGCGGCAACATCGCCGACCCCTC...CAGACTGGAGGGAAGCAACGTGGGAGGAGACGAAAACAAAGCAGTGAGGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS TCA 90 bp TCCACGAGTCCCCCAGCGAGGTCCAGAGCTCGTTTTCACGTGGAGTaGCGTTGTCCCGCAGCAGCGCCACGGCATCCGATGTCAGATGCG +
Preference number: 5 (lower is better)
Translates to: STSPPARSRARFHVE*RCPAAAPRHPMSDA
Trigger: CGCATCTGACATCGGATGCCGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGACCTCGCTGGGGGACTCGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000588359.5
ENST00000589362.5
ENST00000590610.5
ENST00000592102.5
ENST00000592284.5
ENST00000592824.5
CDS CCA 90 bp GAAGCGGGAGGGTTGGAGATAAGGAGGCAGCCAGCCCCATTGCTCTaGGCTGCAGGGTGCTGGTGTGAGCTGGGGTTAGAGCCAAGCTGG +
Preference number: 5 (lower is better)
Translates to: EAGGLEIRRQPAPLL*AAGCWCELGLEPSW
Trigger: CCAGCTTGGCTCTAACCCCAGCTCACACCAGCACCCTGCAGCCCAGAGCAATGGGGCTGGCTGCCTCCTTATCTCCAACCCTCCCGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589694.1
CDS CCA 90 bp CCCATGGAGACCCAGTCCGGGTGGTTCCTCGCCCCCACCTCGTCCTaGCTGCTCCCCCAGATCCTTCTTGGCCATGTTCTGTTCATGTCC +
Preference number: 5 (lower is better)
Translates to: PMETQSGWFLAPTSS*LLPQILLGHVLFMS
Trigger: GGACATGAACAGAACATGGCCAAGAAGGATCTGGGGGAGCAGCCAGGACGAGGTGGGGGCGAGGAACCACCCGGACTGGGTCTCCATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592044.1
CDS-3UTR CAA 90 bp CAGCCAGTCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCGAGGCCGAGTCAGCGTaGCTCGAGGTCCCCACCGGC +
Preference number: 5 (lower is better)
Translates to: QPVQILSGGTAARIVKSVEAESA*LEVPTG
Trigger: GCCGGTGGGGACCTCGAGCAACGCTGACTCGGCCTC...GACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGACTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CAA 90 bp AGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGAGGCCGAGTCAGCGTaGCTCGAGGTCCCCACCGGC +
Preference number: 5 (lower is better)
Translates to: RRSTSAIGESLRSPFSHGEAESA*LEVPTG
Trigger: GCCGGTGGGGACCTCGAGCAACGCTGACTCGGCCTC...CCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CAA 90 bp GCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGGAGGGGTCGGCGATGTaGCCGCGCAGCCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: ADWPSFRRSTSAIGESLREGSAM*PRSRAS
Trigger: GCTGGCCCGGCTGCGCGGCAACATCGCCGACCCCTC...CCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CAA 90 bp ACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCTCACGTGGAGTGACGTaGTCCCGCAGCAGCGCCACG +
Preference number: 5 (lower is better)
Translates to: TGMGEDQGRSRLAILQKISRGVT*SRSSAT
Trigger: CGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGA...GATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CAA 90 bp GAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCCTGGGGTCCAAGCCGTaGAGGCTATCGCAGCTGTCC +
Preference number: 5 (lower is better)
Translates to: ESLRSPFSHGASSLFAKGLGSKP*RLSQLS
Trigger: GGACAGCTGCGATAGCCTCAACGGCTTGGACCCCAG...GCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR CAA 90 bp AGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCAGCAGGGCCGGAGCAGATaGGCCATCCTTCAGAAGATC +
Preference number: 5 (lower is better)
Translates to: RSPFSHGASSLFAKGAWQQGRSR*AILQKI
Trigger: GATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTG...CTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CAA 90 bp CTCGGGGGTCTGCTAGCGCTTTCCGTAGACTGTCTCCACGCCCTCCCCACTCCCCAGGGCCGGAGCAGATaGGCCATCCTTCAGAAGATC +
Preference number: 5 (lower is better)
Translates to: LGGLLALSVDCLHALPTPQGRSR*AILQKI
Trigger: GATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTG...GGGAGTGGGGAGGGCGTGGAGACAGTCTACGGAAAGCGCTAGCAGACCCCCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000586329.5
CDS GCA 90 bp GGTGTTAGCAATGGCGAGGACGATGGCCTTTCTTCCCATGCGTGCTaGAAGGGAGGACACGAGGGGCTCTGCCAAGGCCAGGAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: GVSNGEDDGLSSHAC*KGGHEGLCQGQERL
Trigger: CAGCCTCTCCTGGCCTTGGCAGAGCCCCTCGTGTCCTCCCTTGCAGCACGCATGGGAAGAAAGGCCATCGTCCTCGCCATTGCTAACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586329.5
CDS GCA 90 bp GCTGGTGTTAGCAATGGCGAGGACGATGGCCTTTCTTCCCATGCGTaGTGCAAGGGAGGACACGAGGGGCTCTGCCAAGGCCAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: AGVSNGEDDGLSSHA*CKGGHEGLCQGQER
Trigger: CCTCTCCTGGCCTTGGCAGAGCCCCTCGTGTCCTCCCTTGCAGCACGCATGGGAAGAAAGGCCATCGTCCTCGCCATTGCTAACACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586329.5
CDS-3UTR CAA 90 bp GGATCGTTAAGTCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGACTTGGCGCTTGGCTTaGGGGCAGCTTCTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: GSLSLSTGMGEDQGRSRLTWRLA*GQLLGL
Trigger: CAGGCCCAGAAGCTGCCCCAAAGCCAAGCGCCAAGT...CAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGACTTAACGATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000201647.11
CDS-3UTR CAA 90 bp AGCCAGTCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCGACTCCAGCTCCTCCTaGGAGGCCGGGTCGAGCAGC +
Preference number: 5 (lower is better)
Translates to: SQSRSSPEGLQQGSLSLSDSSSS*EAGSSS
Trigger: GCTGCTCGACCCGGCCTCCAAGGAGGAGCTGGAGTC...GGACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGACTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CAA 90 bp CAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGACTCCAGCTCCTCCTaGGAGGCCGGGTCGAGCAGC +
Preference number: 5 (lower is better)
Translates to: QGRSRLAILQKIDFRYWGDSSSS*EAGSSS
Trigger: GCTGCTCGACCCGGCCTCCAAGGAGGAGCTGGAGTC...TCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CAA 90 bp ATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCGACTCCAGCTCCTCCTaGGAGGCCGGGTCGAGCAGC +
Preference number: 5 (lower is better)
Translates to: MGEDQGRSRLAILQKIDFDSSSS*EAGSSS
Trigger: GCTGCTCGACCCGGCCTCCAAGGAGGAGCTGGAGTC...GAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CAA 90 bp TCCAGCCTCACTGCTTTGTTTTCGTCTCCTCCCACGTTGCTTCCCTCCAGTCTGGAGGCCGAGTCAGCGTaGCTCGAGGTCCCCACCGGC +
Preference number: 5 (lower is better)
Translates to: SSLTALFSSPPTLLPSSLEAESA*LEVPTG
Trigger: GCCGGTGGGGACCTCGAGCAACGCTGACTCGGCCTC...CAGACTGGAGGGAAGCAACGTGGGAGGAGACGAAAACAAAGCAGTGAGGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CAA 90 bp TTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTCCGCCTCCGAGGGCGGCTaGGCCCGCAGCGTCAGCAAG +
Preference number: 5 (lower is better)
Translates to: LAILQKIDFRYWGESEESASEGG*ARSVSK
Trigger: CTTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGGC...GGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CAA 90 bp TCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAAGTACGTCCCGCTGCTaGACCGACAGCTCACTGCTG +
Preference number: 5 (lower is better)
Translates to: SVHRDGGRPGPEQIGHPSSTSRC*TDSSLL
Trigger: CAGCAGTGAGCTGTCGGTCAAGCAGCGGGACGTACT...TGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CAA 90 bp GGATCGTTAAGTCTGTCCACCGGGATGGGGGAAGACCAGGGCCGGAGCAGATTGCTGGGGTCCAAGCCGTaGAGGCTATCGCAGCTGTCC +
Preference number: 5 (lower is better)
Translates to: GSLSLSTGMGEDQGRSRLLGSKP*RLSQLS
Trigger: GGACAGCTGCGATAGCCTCAACGGCTTGGACCCCAG...CAATCTGCTCCGGCCCTGGTCTTCCCCCATCCCGGTGGACAGACTTAACGATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR CAA 90 bp CTCGGGGGTCTGCTAGCGCTTTCCGTAGACTGTCTCCACGCCCTCCCCACTCCCTCTGACACTTTCTCTTaGTCCTCCAGCAGCGAGCGC +
Preference number: 5 (lower is better)
Translates to: LGGLLALSVDCLHALPTPSDTFS*SSSSER
Trigger: GCGCTCGCTGCTGGAGGACAAAGAGAAAGTGTCAGA...GGGAGTGGGGAGGGCGTGGAGACAGTCTACGGAAAGCGCTAGCAGACCCCCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000201647.11
ENST00000245618.5
CDS-3UTR CAA 90 bp CTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGTCTGACACTTTCTCTTaGTCCTCCAGCAGCGAGCGC +
Preference number: 5 (lower is better)
Translates to: LRSPFSHGASSLFAKGAWSDTFS*SSSSER
Trigger: GCGCTCGCTGCTGGAGGACAAAGAGAAAGTGTCAGA...CCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR CAA 90 bp AGCCAGTCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCGGGCCTCGTCACTCTTaGCGAAGGGCGCCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: SQSRSSPEGLQQGSLSLSGPRHS*RRAPGR
Trigger: CCTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCC...GGACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGACTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CAA 90 bp TCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGCAGGGCCGGAGCAGATaGGCCATCCTTCAGAAGATC +
Preference number: 5 (lower is better)
Translates to: SEESVLPRGLVTLCEGRLQGRSR*AILQKI
Trigger: GATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTG...CAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS GCA 90 bp GGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTaGGAAGGGCGCCTGGCAGGTCAAATGACCTCCATTTCCACCTCG +
Preference number: 5 (lower is better)
Translates to: GESEESVLPRGLVTL*EGRLAGQMTSISTS
Trigger: CGAGGTGGAAATGGAGGTCATTTGACCTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000587715.1
ENST00000587901.1
ENST00000588359.5
ENST00000589362.5
ENST00000592102.5
CDS GCA 90 bp TGGCTATCCATGACGGCCAACTTCCTGGAGGCATCCTCCACGGTATaGACGCCATCGTCCTCACCCAGGCAGAACGTCACCAGGTGCCTG +
Preference number: 5 (lower is better)
Translates to: WLSMTANFLEASSTV*TPSSSPRQNVTRCL
Trigger: CAGGCACCTGGTGACGTTCTGCCTGGGTGAGGACGATGGCGTGCATACCGTGGAGGATGCCTCCAGGAAGTTGGCCGTCATGGATAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540810.5
CDS GCA 90 bp TGGCTATCCATGACGGCCAACTTCCTGGAGGCATCCTCCACGGTATaGACGCCATCGTCCTCACCCAGGCAGAACGTCACCAGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: WLSMTANFLEASSTV*TPSSSPRQNVTRCW
Trigger: CCAGCACCTGGTGACGTTCTGCCTGGGTGAGGACGATGGCGTGCATACCGTGGAGGATGCCTCCAGGAAGTTGGCCGTCATGGATAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586329.5
ENST00000592318.1
CDS GCA 90 bp TGGAGACCCAGTCCGGGTGGTTCCTCGCCCCCACCTCGTCCTGGCTaGTCCCCCAGATCCTTCTTGGCCATGTTCTGTTCATGTCCTCAT +
Preference number: 5 (lower is better)
Translates to: WRPSPGGSSPPPRPG*SPRSFLAMFCSCPH
Trigger: ATGAGGACATGAACAGAACATGGCCAAGAAGGATCTGGGGGAGCAGCCAGGACGAGGTGGGGGCGAGGAACCACCCGGACTGGGTCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592044.1
CDS-3UTR CAA 90 bp AGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGGCCTCCGAGGGCGGCTaGGCCCGCAGCGTCAGCAAG +
Preference number: 5 (lower is better)
Translates to: RLAILQKIDFRYWGESEEASEGG*ARSVSK
Trigger: CTTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGGC...CTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CAA 90 bp TTACCCCTCTCGGGGGCCCAGAGATACTACCACTTCCTAACTTTCCCAGAAACTGCCTCCGAGGGCGGCTaGGCCCGCAGCGTCAGCAAG +
Preference number: 5 (lower is better)
Translates to: LPLSGAQRYYHFLTFPETASEGG*ARSVSK
Trigger: CTTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGGC...AGTTTCTGGGAAAGTTAGGAAGTGGTAGTATCTCTGGGCCCCCGAGAGGGGTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CAA 90 bp AGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGTCACGTGGAGTGACGTaGTCCCGCAGCAGCGCCACG +
Preference number: 5 (lower is better)
Translates to: RAGADWPSFRRSTSAIGESRGVT*SRSSAT
Trigger: CGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGA...CTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CAA 90 bp ATGGGGGAAGACCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCTCACGTGGAGTGACGTaGTCCCGCAGCAGCGCCACG +
Preference number: 5 (lower is better)
Translates to: MGEDQGRSRLAILQKIDFSRGVT*SRSSAT
Trigger: CGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGA...GAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGGTCTTCCCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CAA 90 bp CCAGCCTTTTGGGGATCCAGGGATCCAACCTCTCAGACTTTACCCACTCCCAGCTCACGTGGAGTGACGTaGTCCCGCAGCAGCGCCACG +
Preference number: 5 (lower is better)
Translates to: PAFWGSRDPTSQTLPTPSSRGVT*SRSSAT
Trigger: CGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGA...GCTGGGAGTGGGTAAAGTCTGAGAGGTTGGATCCCTGGATCCCCAAAAGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CAA 90 bp ATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAGTACGTCCCGCTGCTaGACCGACAGCTCACTGCTG +
Preference number: 5 (lower is better)
Translates to: IGESLRSPFSHGASSLFASTSRC*TDSSLL
Trigger: CAGCAGTGAGCTGTCGGTCAAGCAGCGGGACGTACT...CGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR CAA 90 bp GGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGCCTGCAGTTCCTCGTaGACGATGAGCATCTGGGAG +
Preference number: 5 (lower is better)
Translates to: GESLRSPFSHGASSLFAKACSSS*TMSIWE
Trigger: CTCCCAGATGCTCATCGTCAACGAGGAACTGCAGGC...CTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR CAA 90 bp TCTCGGGGGTCTGCTAGCGCTTTCCGTAGACTGTCTCCACGCCCTCCCCACTCCTCTGACACTTTCTCTTaGTCCTCCAGCAGCGAGCGC +
Preference number: 5 (lower is better)
Translates to: SRGSASAFRRLSPRPPHSSDTFS*SSSSER
Trigger: GCGCTCGCTGCTGGAGGACAAAGAGAAAGTGTCAGA...GGAGTGGGGAGGGCGTGGAGACAGTCTACGGAAAGCGCTAGCAGACCCCCGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000201647.11
ENST00000245618.5
CDS-3UTR CAA 90 bp CCCTTAGGCCCAGGAATCCGGGTCTCCATTCCCAACTCCCTTAGCCCCAGAAGTTCGTCTCCTCCCACGTaGCTTCCCTCCAGTCTGCCC +
Preference number: 5 (lower is better)
Translates to: PLGPGIRVSIPNSLSPRSSSPPT*LPSSLP
Trigger: GGGCAGACTGGAGGGAAGCAACGTGGGAGGAGACGA...ACTTCTGGGGCTAAGGGAGTTGGGAATGGAGACCCGGATTCCTGGGCCTAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS TCA 90 bp CTGACTCCAGCTGAGGCTCAGATTCTGGCTCCAAGTCTCGGTGACTaGGGAGAAGCGGGAGGGTTGGAGATAAGGAGGCAGCCAGCCCCA +
Preference number: 5 (lower is better)
Translates to: LTPAEAQILAPSLGD*GEAGGLEIRRQPAP
Trigger: TGGGGCTGGCTGCCTCCTTATCTCCAACCCTCCCGCTTCTCCTCAGTCACCGAGACTTGGAGCCAGAATCTGAGCCTCAGCTGGAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589694.1
CDS-3UTR CAA 90 bp GCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTAGTACGTCCCGCTGCTaGACCGACAGCTCACTGCTG +
Preference number: 5 (lower is better)
Translates to: AIGESLRSPFSHGASSLFSTSRC*TDSSLL
Trigger: CAGCAGTGAGCTGTCGGTCAAGCAGCGGGACGTACT...AAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
CDS-3UTR CAA 90 bp CGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTGCCTGCAGTTCCTCGTaGACGATGAGCATCTGGGAG +
Preference number: 5 (lower is better)
Translates to: RYWGESEESVLPRGLVTLACSSS*TMSIWE
Trigger: CTCCCAGATGCTCATCGTCAACGAGGAACTGCAGGC...AAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR CAA 90 bp TTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGCCTCGTCACTCTTaGCGAAGGGCGCCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: FRRSTSAIGESLRSPFSHGPRHS*RRAPGR
Trigger: CCTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCC...GTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CAA 90 bp CTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGTCCCCCAGATCCTTCTaGGCCATGTTCTGTTCATGT +
Preference number: 5 (lower is better)
Translates to: LRSPFSHGASSLFAKGAWSPRSF*AMFCSC
Trigger: ACATGAACAGAACATGGCCAAGAAGGATCTGGGGGA...CCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000245618.5
ENST00000588359.5
CDS GCA 90 bp TGGCTATCCATGACGGCCAACTTCCTGGAGGCATCCTCCACGGTATaGACGCCATCGTCCTCACCCAGGCAGAACGTCACCAGGTGCATA +
Preference number: 5 (lower is better)
Translates to: WLSMTANFLEASSTV*TPSSSPRQNVTRCI
Trigger: TATGCACCTGGTGACGTTCTGCCTGGGTGAGGACGATGGCGTGCATACCGTGGAGGATGCCTCCAGGAAGTTGGCCGTCATGGATAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CAA 90 bp CAGGCATGGTGCTTCCCAGGCCCTGGGAAAACAAACTGGCTTCTTCCAGCCTTTACTTGGCGCTTGGCTTaGGGGCAGCTTCTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: QAWCFPGPGKTNWLLPAFTWRLA*GQLLGL
Trigger: CAGGCCCAGAAGCTGCCCCAAAGCCAAGCGCCAAGT...AAAGGCTGGAAGAAGCCAGTTTGTTTTCCCAGGGCCTGGGAAGCACCATGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CAA 90 bp TGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAAGGCTGAAGGCGTACTaGATCTTCTGCAGCACGTCG +
Preference number: 5 (lower is better)
Translates to: WGESEESVLPRGLVTLCERLKAY*IFCSTS
Trigger: CGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCT...TTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CAA 90 bp GCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCCTGCAGTTCCTCGTaGACGATGAGCATCTGGGAG +
Preference number: 5 (lower is better)
Translates to: AIGESLRSPFSHGASSLFACSSS*TMSIWE
Trigger: CTCCCAGATGCTCATCGTCAACGAGGAACTGCAGGC...AAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
CDS-3UTR CAA 90 bp GAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCACCTTCATGTTCTATCTaGACCCTGGGTCCAATCTCA +
Preference number: 5 (lower is better)
Translates to: EESVLPRGLVTLCEGRLAPSCSI*TLGPIS
Trigger: TGAGATTGGACCCAGGGTCAAGATAGAACATGAAGG...TGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245618.5
ENST00000588359.5
CDS-3UTR CAA 90 bp CAGGCATGGTGCTTCCCAGGCCCTGGGAAAACAAACTGGCTTCTTCCAGCCTTTCTTGCCCCCAAGCCCTaGAAGTCCCAAGCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: QAWCFPGPGKTNWLLPAFLAPKP*KSQACS
Trigger: GGAGCAGGCTTGGGACTTCAAGGGCTTGGGGGCAAG...AAAGGCTGGAAGAAGCCAGTTTGTTTTCCCAGGGCCTGGGAAGCACCATGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS-3UTR CAA 90 bp AGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGTCACGTGGAGTGACGTaGTCCCGCAGCAGCGCCACG +
Preference number: 5 (lower is better)
Translates to: SRLAILQKIDFRYWGESESRGVT*SRSSAT
Trigger: CGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGA...CTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CAA 90 bp TTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTCCCTGGGGTCCAAGCCGTaGAGGCTATCGCAGCTGTCC +
Preference number: 5 (lower is better)
Translates to: LAILQKIDFRYWGESEESLGSKP*RLSQLS
Trigger: GGACAGCTGCGATAGCCTCAACGGCTTGGACCCCAG...GGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR CAA 90 bp CCAGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGTCTGACACTTTCTCTTaGTCCTCCAGCAGCGAGCGC +
Preference number: 5 (lower is better)
Translates to: PGPEQIGHPSEDRLPLLGSDTFS*SSSSER
Trigger: GCGCTCGCTGCTGGAGGACAAAGAGAAAGTGTCAGA...CCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR CAA 90 bp CAGTCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCACCCAGGGCCGGAGCAGATaGGCCATCCTTCAGAAGATC +
Preference number: 5 (lower is better)
Translates to: QSRSSPEGLQQGSLSLSTQGRSR*AILQKI
Trigger: GATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCTG...GGTGGACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CAA 90 bp GGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTGCGAAGTCCCCCAGATCCTTCTaGGCCATGTTCTGTTCATGT +
Preference number: 5 (lower is better)
Translates to: GESLRSPFSHGASSLFAKSPRSF*AMFCSC
Trigger: ACATGAACAGAACATGGCCAAGAAGGATCTGGGGGA...CTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000245618.5
ENST00000588359.5
CDS TCA 90 bp CACGGGGCCTCGTCACTCTTTGCGAAGGGCGCCTGGCAGGTCAAATaGCCTCCATTTCCACCTCGCCTTCCACCTTCTTCTTTTGCTTCT +
Preference number: 5 (lower is better)
Translates to: HGASSLFAKGAWQVK*PPFPPRLPPSSFAS
Trigger: AGAAGCAAAAGAAGAAGGTGGAAGGCGAGGTGGAAATGGAGGTCATTTGACCTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000587715.1
ENST00000587901.1
ENST00000588359.5
ENST00000589362.5
ENST00000592102.5
CDS CCA 90 bp GCTCGCGAACCCCACCTCGTCCTGGCTGCTCCCCCAGATCCTTCTTaGCCATGTTCTGTTCATGTCCTCATCCCACCTTCATGTTCTATC +
Preference number: 5 (lower is better)
Translates to: AREPHLVLAAPPDPS*PCSVHVLIPPSCSI
Trigger: GATAGAACATGAAGGTGGGATGAGGACATGAACAGAACATGGCCAAGAAGGATCTGGGGGAGCAGCCAGGACGAGGTGGGGTTCGCGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588359.5
CDS CCA 90 bp GTTCCTCGCCCCCACCTCGTCCTGGCTGCTCCCCCAGATCCTTCTTaGCCATGTTCTGTTCATGTCCTCATCCCACCTTCATGTTCTATC +
Preference number: 5 (lower is better)
Translates to: VPRPHLVLAAPPDPS*PCSVHVLIPPSCSI
Trigger: GATAGAACATGAAGGTGGGATGAGGACATGAACAGAACATGGCCAAGAAGGATCTGGGGGAGCAGCCAGGACGAGGTGGGGGCGAGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592044.1
CDS-3UTR CAA 90 bp CAGTCCAGATCCTCTCCGGAGGGACTGCAGCAAGGATCGTTAAGTCTGTCCACCAGGCTGAAGGCGTACTaGATCTTCTGCAGCACGTCG +
Preference number: 5 (lower is better)
Translates to: QSRSSPEGLQQGSLSLSTRLKAY*IFCSTS
Trigger: CGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCT...GGTGGACAGACTTAACGATCCTTGCTGCAGTCCCTCCGGAGAGGATCTGGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CAA 90 bp TCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCAGTACGTCCCGCTGCTaGACCGACAGCTCACTGCTG +
Preference number: 5 (lower is better)
Translates to: SFRRSTSAIGESLRSPFSSTSRC*TDSSLL
Trigger: CAGCAGTGAGCTGTCGGTCAAGCAGCGGGACGTACT...GGAGAACGGACTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CAA 90 bp CCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCGCCTGCAGTTCCTCGTaGACGATGAGCATCTGGGAG +
Preference number: 5 (lower is better)
Translates to: PEQIGHPSEDRLPLLGRVACSSS*TMSIWE
Trigger: CTCCCAGATGCTCATCGTCAACGAGGAACTGCAGGC...GACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
CDS-3UTR CAA 90 bp CCAGCCTTTTGGGGATCCAGGGATCCAACCTCTCAGACTTTACCCACTCCCAGCTCCAGCCTCACTGCTTaGTTTTCGTCTCCTCCCACG +
Preference number: 5 (lower is better)
Translates to: PAFWGSRDPTSQTLPTPSSSLTA*FSSPPT
Trigger: CGTGGGAGGAGACGAAAACAAAGCAGTGAGGCTGGA...GCTGGGAGTGGGTAAAGTCTGAGAGGTTGGATCCCTGGATCCCCAAAAGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS CCA 90 bp TCGGATCAGCTCCGCCTCGTCCTGGCTGCTCCCCCAGATCCTTCTTaGCCATGTTCTGTTCATGTCCTCATCCCACCTTCATGTTCTATC +
Preference number: 5 (lower is better)
Translates to: SDQLRLVLAAPPDPS*PCSVHVLIPPSCSI
Trigger: GATAGAACATGAAGGTGGGATGAGGACATGAACAGAACATGGCCAAGAAGGATCTGGGGGAGCAGCCAGGACGAGGCGGAGCTGATCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000245618.5
CDS-3UTR CAA 90 bp CCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCAGGCTGAAGGCGTACTaGATCTTCTGCAGCACGTCG +
Preference number: 5 (lower is better)
Translates to: PEQIGHPSEDRLPLLGRVRLKAY*IFCSTS
Trigger: CGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCT...GACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CAA 90 bp AGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGAGTCTGAGGAGAGTACGTCCCGCTGCTaGACCGACAGCTCACTGCTG +
Preference number: 5 (lower is better)
Translates to: RLAILQKIDFRYWGESEESTSRC*TDSSLL
Trigger: CAGCAGTGAGCTGTCGGTCAAGCAGCGGGACGTACT...CTCCTCAGACTCTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
CDS-3UTR CAA 90 bp CGCTATTGGGGAGAGTCTGAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTCCTTCATGTTCTATCTaGACCCTGGGTCCAATCTCA +
Preference number: 5 (lower is better)
Translates to: RYWGESEESVLPRGLVTLPSCSI*TLGPIS
Trigger: TGAGATTGGACCCAGGGTCAAGATAGAACATGAAGG...AAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCTCCCCAATAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000245618.5
ENST00000588359.5
CDS-3UTR CAA 90 bp AGGGCCGGAGCAGATTGGCCATCCTTCAGAAGATCGACTTCCGCTATTGGGGAGTCTGACACTTTCTCTTaGTCCTCCAGTACGTCCCGC +
Preference number: 5 (lower is better)
Translates to: RAGADWPSFRRSTSAIGESDTFS*SSSTSR
Trigger: GCGGGACGTACTGGAGGACAAAGAGAAAGTGTCAGA...CTCCCCAATAGCGGAAGTCGATCTTCTGAAGGATGGCCAATCTGCTCCGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586329.5
CDS TCA 90 bp GGCCTGGAAGTCATAATTACACAGGACCCATTTTCCTGCTGTCTCTaGCTCCAGCTGAGGCTCAGATTCTGGCTCCAAGTCTCGGTGACC +
Preference number: 5 (lower is better)
Translates to: GLEVIITQDPFSCCL*LQLRLRFWLQVSVT
Trigger: GGTCACCGAGACTTGGAGCCAGAATCTGAGCCTCAGCTGGAGTCAGAGACAGCAGGAAAATGGGTCCTGTGTAATTATGACTTCCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000588359.5
ENST00000589362.5
ENST00000592102.5
CDS-3UTR CAA 90 bp CCAGAGTCTGAGCCCCCACTGCTTGGTAGAACCATGACTTGGAATGTTCTTTCCAGGCTGAAGGCGTACTaGATCTTCTGCAGCACGTCG +
Preference number: 5 (lower is better)
Translates to: PESEPPLLGRTMTWNVLSRLKAY*IFCSTS
Trigger: CGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCT...GGAAAGAACATTCCAAGTCATGGTTCTACCAAGCAGTGGGGGCTCAGACTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS TCA 90 bp GGCCTGGAAGTCATAATTACACAGGACCCATTTTCCTGCTGTCTCTaGCTCCAGCTGAGGCTCAGATTCTGGCTCCAAGTCTCGGTGACT +
Preference number: 5 (lower is better)
Translates to: GLEVIITQDPFSCCL*LQLRLRFWLQVSVT
Trigger: AGTCACCGAGACTTGGAGCCAGAATCTGAGCCTCAGCTGGAGTCAGAGACAGCAGGAAAATGGGTCCTGTGTAATTATGACTTCCAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585347.5
ENST00000589694.1
CDS TCA 90 bp GGCCATGTTCTGTTCATGTCCTCATCCCACCTTCATGTTCTATCTTaGCCCTGGGTCCAATCTCAAACCCCACTGCCTTCCAGAACTTCC +
Preference number: 5 (lower is better)
Translates to: GHVLFMSSSHLHVLS*PWVQSQTPLPSRTS
Trigger: GGAAGTTCTGGAAGGCAGTGGGGTTTGAGATTGGACCCAGGGTCAAGATAGAACATGAAGGTGGGATGAGGACATGAACAGAACATGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245618.5
ENST00000588359.5
CDS-3UTR CAA 90 bp TTACCCCTCTCGGGGGCCCAGAGATACTACCACTTCCTAACTTTCCCAGAAACTCAGTCTGCCCTCTATTaGCTCAAGGACCCTAGAGTT +
Preference number: 5 (lower is better)
Translates to: LPLSGAQRYYHFLTFPETQSALY*LKDPRV
Trigger: AACTCTAGGGTCCTTGAGCAAATAGAGGGCAGACTG...AGTTTCTGGGAAAGTTAGGAAGTGGTAGTATCTCTGGGCCCCCGAGAGGGGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587786.5
CDS TCA 72 bp GCGCCCCGGTCAGCACACCCAGCGCGTCCACGGTCCTaGGCGAGGGCAGCCCGGGCGCGGTCAGGCCGGTCG +
Preference number: 6 (lower is better)
Translates to: APRSAHPARPRS*ARAARARSGRS
Trigger: CGACCGGCCTGACCGCGCCCGGGCTGCCCTCGCTCAGGACCGTGGACGCGCTGGGTGTGCTGACCGGGGCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587715.1
CDS TCA 72 bp GGGGTCGTCCGCGGCCCGCGCCCCGCTCTACGGTGCTaGTCACTGCGCGGACTGACGGGCGGCGCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: GVVRGPRPALRC*SLRGLTGGAAG
Trigger: CCCTGCAGCGCCGCCCGTCAGTCCGCGCAGTGATCAGCACCGTAGAGCGGGGCGCGGGCCGCGGACGACCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000590232.1
ENST00000592824.5
CDS CCA 72 bp CCGGCTCAGGCCTCTGCGCCTCCTCTGCCTCGGGAATaGGCTTCGCCTGGGGTCGTCCGCGGCCCGCGCCCC +
Preference number: 6 (lower is better)
Translates to: PAQASAPPLPRE*ASPGVVRGPRP
Trigger: GGGGCGCGGGCCGCGGACGACCCCAGGCGAAGCCCATTCCCGAGGCAGAGGAGGCGCAGAGGCCTGAGCCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000590232.1
ENST00000592824.5
CDS GCA 72 bp GAGGGCAGCCCGGGCGCGGTCAGGCCGGTCGGCGGATaGCCCAGCCCGGACAATCATGTCACGCCCACCCGG +
Preference number: 6 (lower is better)
Translates to: EGSPGAVRPVGG*PSPDNHVTPTR
Trigger: CCGGGTGGGCGTGACATGATTGTCCGGGCTGGGGCATCCGCCGACCGGCCTGACCGCGCCCGGGCTGCCCTC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587715.1
CDS CCA 72 bp GCAGCACGTCGGTGTACTCGGCCTCCGAGGGCGGCTTaGCCCGCAGCGTCAGCAAGCCCTCCCCAGCCGCCC +
Preference number: 6 (lower is better)
Translates to: AARRCTRPPRAA*PAASASPPQPP
Trigger: GGGCGGCTGGGGAGGGCTTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000590610.5
ENST00000592102.5
ENST00000592284.5
ENST00000592824.5
CDS CCA 72 bp CGGCGGGCGAGCGGTCGCGCTGCAACTCCTCCTGCGTaGCCCTGCGGAGGGCGACGGGGACACCAAGACTGG +
Preference number: 6 (lower is better)
Translates to: RRASGRAATPPA*PCGGRRGHQDW
Trigger: CCAGTCTTGGTGTCCCCGTCGCCCTCCGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCCCGCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590232.1
CDS GCA 72 bp TCAGCGGCGGGCGAGCGGTCGCGCTGCAACTCCTCCTaGGTGGCCCTGCGGAGGGCGACGGGGACACCAAGA +
Preference number: 6 (lower is better)
Translates to: SAAGERSRCNSS*VALRRATGTPR
Trigger: TCTTGGTGTCCCCGTCGCCCTCCGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGCCCGCCGCTGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590232.1
CDS CAA 72 bp TGCAGCACGTCGGTGTACTCGGCCTCCGAGGGCGGCTaGGCCCGCAGCGTCAGCAAGCCCTCCCCAGCCGCC +
Preference number: 6 (lower is better)
Translates to: CSTSVYSASEGG*ARSVSKPSPAA
Trigger: GGCGGCTGGGGAGGGCTTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000590610.5
ENST00000592102.5
ENST00000592284.5
ENST00000592824.5
CDS CAA 90 bp TTGATCTTCTGCAGCACGTCGGTGTACTCGGCCTCCGAGGGCGGCTaGGCCCGCAGCGTCAGCAAGCCCTCCCCAGCCGCCCGGCGCCGG +
Preference number: 6 (lower is better)
Translates to: LIFCSTSVYSASEGG*ARSVSKPSPAARRR
Trigger: CCGGCGCCGGGCGGCTGGGGAGGGCTTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000590610.5
ENST00000592102.5
ENST00000592284.5
ENST00000592824.5
CDS GCA 72 bp GCGAGCGGTCGCGCTGCAACTCCTCCTGCGTGGCCCTaGGGAGGGCGACGGGGACACCAAGACTGGGTCCAC +
Preference number: 6 (lower is better)
Translates to: ASGRAATPPAWP*GGRRGHQDWVH
Trigger: GTGGACCCAGTCTTGGTGTCCCCGTCGCCCTCCGCAGGGCCACGCAGGAGGAGTTGCAGCGCGACCGCTCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590232.1
CDS CCA 72 bp CCCCGGACTTCCCAGCCTCGGCCCTGCTGTGTCGCTTaGGTCACCTGCCGGCGCCTCCGCTCGTGCTGTAGC +
Preference number: 6 (lower is better)
Translates to: PRTSQPRPCCVA*VTCRRLRSCCS
Trigger: GCTACAGCACGAGCGGAGGCGCCGGCAGGTGACCCAAGCGACACAGCAGGGCCGAGGCTGGGAAGTCCGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586329.5
ENST00000588359.5
ENST00000589362.5
ENST00000592102.5
CDS GCA 72 bp TTGTCCCGCAGCAGCGCCACGGCATCCGATGTCAGATaGGGCCGCCGCACACTGCTCGCGAACTCCGGCCCC +
Preference number: 6 (lower is better)
Translates to: LSRSSATASDVR*GRRTLLANSGP
Trigger: GGGGCCGGAGTTCGCGAGCAGTGTGCGGCGGCCGCATCTGACATCGGATGCCGTGGCGCTGCTGCGGGACAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000589362.5
ENST00000590610.5
ENST00000592102.5
ENST00000592284.5
ENST00000592824.5
CDS CCA 72 bp GCACACGAGCAGCAGCAACGAGCGGCTCCTGCCGGGTaGCATCACCGCGTCACAGCGCACGATGGCGCCCAG +
Preference number: 6 (lower is better)
Translates to: AHEQQQRAAPAG*HHRVTAHDGAQ
Trigger: CTGGGCGCCATCGTGCGCTGTGACGCGGTGATGCCACCCGGCAGGAGCCGCTCGTTGCTGCTGCTCGTGTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000591219.5
ENST00000592824.5
CDS CCA 72 bp GCAGCACGTCGGTGTACTCGGCCTCCGAGGGCGGCTTaGCCCGCAGCGTCAGCAAGCCCTCTGAGGGGAGCA +
Preference number: 6 (lower is better)
Translates to: AARRCTRPPRAA*PAASASPLRGA
Trigger: TGCTCCCCTCAGAGGGCTTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589362.5
CDS CAA 72 bp TGCAGCACGTCGGTGTACTCGGCCTCCGAGGGCGGCTaGGCCCGCAGCGTCAGCAAGCCCTCTGAGGGGAGC +
Preference number: 6 (lower is better)
Translates to: CSTSVYSASEGG*ARSVSKPSEGS
Trigger: GCTCCCCTCAGAGGGCTTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589362.5
CDS CAA 90 bp CGGCCCAGGGGCGGGCGCGTCCTCACCAGCAGGCTGAAGGCGTACTaGATCTTCTGCAGCACGTCGGTGTACTCGGCCTCCGAGGGCGGC +
Preference number: 6 (lower is better)
Translates to: RPRGGRVLTSRLKAY*IFCSTSVYSASEGG
Trigger: GCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGTGAGGACGCGCCCGCCCCTGGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592102.5
ENST00000592284.5
CDS GCA 72 bp TTGTCCCGCAGCAGCGCCACGGCATCCGATGTCAGATaGGGCCGCCGCACACTGCTCGCGAACCCCACCTCG +
Preference number: 6 (lower is better)
Translates to: LSRSSATASDVR*GRRTLLANPTS
Trigger: CGAGGTGGGGTTCGCGAGCAGTGTGCGGCGGCCGCATCTGACATCGGATGCCGTGGCGCTGCTGCGGGACAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588359.5
CDS CCA 72 bp CCACGCCGCACCCACTTCCTACCCGGGCCTCGCCCCTaGCCGATTTTTCAGCTCAGTCCCAGCCCACGTGCG +
Preference number: 6 (lower is better)
Translates to: PRRTHFLPGPRP*PIFQLSPSPRA
Trigger: CGCACGTGGGCTGGGACTGAGCTGAAAAATCGGCCAGGGGCGAGGCCCGGGTAGGAAGTGGGTGCGGCGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592044.1
CDS CAA 90 bp TCGGCGATGTTGCCGCGCAGCCGGGCCAGCAGGCTGAAGGCGTACTaGATCTTCTGCAGCACGTCGGTGTACTCGGCCTCCGAGGGCGGC +
Preference number: 6 (lower is better)
Translates to: SAMLPRSRASRLKAY*IFCSTSVYSASEGG
Trigger: GCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGCCCGGCTGCGCGGCAACATCGCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000589362.5
ENST00000590610.5
ENST00000592824.5
CDS CAA 90 bp TTGATCTTCTGCAGCACGTCGGTGTACTCGGCCTCCGAGGGCGGCTaGGCCCGCAGCGTCAGCAAGCCCTCTGAGGGGAGCAGACGGGCG +
Preference number: 6 (lower is better)
Translates to: LIFCSTSVYSASEGG*ARSVSKPSEGSRRA
Trigger: CGCCCGTCTGCTCCCCTCAGAGGGCTTGCTGACGCTGCGGGCCAAGCCGCCCTCGGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589362.5
CDS GCA 72 bp GTTCCTGGCACACGAGCAGCAGCAACGAGCGGCTCCTaGCGGGTGGCATCACCGCGTCACAGCGCACGATGG +
Preference number: 6 (lower is better)
Translates to: VPGTRAAATSGS*RVASPRHSARW
Trigger: CCATCGTGCGCTGTGACGCGGTGATGCCACCCGGCAGGAGCCGCTCGTTGCTGCTGCTCGTGTGCCAGGAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000591219.5
ENST00000592824.5
CDS GCA 72 bp AGCTGTTTCTCAACTGGGTCCTCCCAGGCGCGGCTCTaGGGGTCAGTGACCGGCGGCTCCCAGCCGCTGAAG +
Preference number: 6 (lower is better)
Translates to: SCFSTGSSQARL*GSVTGGSQPLK
Trigger: CTTCAGCGGCTGGGAGCCGCCGGTCACTGACCCGCAGAGCCGCGCCTGGGAGGACCCAGTTGAGAAACAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000588359.5
ENST00000589362.5
ENST00000592102.5
ENST00000592824.5
CDS GCA 72 bp CGGCTCGGTCCCGAGCGGCCCTGGGCCAGGCGCGCCTaGAGTTCCTCGTTGACGATGAGCATCTGGGAGAAT +
Preference number: 6 (lower is better)
Translates to: RLGPERPWARRA*SSSLTMSIWEN
Trigger: ATTCTCCCAGATGCTCATCGTCAACGAGGAACTGCAGGCGCGCCTGGCCCAGGGCCGCTCGGGACCGAGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
ENST00000589362.5
ENST00000592102.5
CDS GCA 72 bp AGAGCCCCCTGGATGTCCTCTCGGATCAGCTCCGCCTaGCAATCACACCGTCAGGCCACGCCTCCCCACGCC +
Preference number: 6 (lower is better)
Translates to: RAPWMSSRISSA*QSHRQATPPHA
Trigger: GGCGTGGGGAGGCGTGGCCTGACGGTGTGATTGGCAGGCGGAGCTGATCCGAGAGGACATCCAGGGGGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592044.1
CDS CCA 72 bp TGGCATCACCGCGTCACAGCGCACGATGGCGCCCAGTaGGTACGACTCCAGCTCCTCCTTGGAGGCCGGGTC +
Preference number: 6 (lower is better)
Translates to: WHHRVTAHDGAQ*VRLQLLLGGRV
Trigger: GACCCGGCCTCCAAGGAGGAGCTGGAGTCGTACCCACTGGGCGCCATCGTGCGCTGTGACGCGGTGATGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000591219.5
ENST00000592824.5
CDS CCA 72 bp TCCTGCCGGGTGGCATCACCGCGTCACAGCGCACGATaGCGCCCAGTGGGTACGACTCCAGCTCCTCCTTGG +
Preference number: 6 (lower is better)
Translates to: SCRVASPRHSAR*RPVGTTPAPPW
Trigger: CCAAGGAGGAGCTGGAGTCGTACCCACTGGGCGCCATCGTGCGCTGTGACGCGGTGATGCCACCCGGCAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000591219.5
ENST00000592824.5
CDS CCA 72 bp TACACCTGTCCCTGCCCTAAGCCACGACCCCGCCCATaGAGACCCAGTCCGGGTGGTTCCTCGCCCCCACCT +
Preference number: 6 (lower is better)
Translates to: YTCPCPKPRPRP*RPSPGGSSPPP
Trigger: AGGTGGGGGCGAGGAACCACCCGGACTGGGTCTCCATGGGCGGGGTCGTGGCTTAGGGCAGGGACAGGTGTA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592044.1
CDS TCA 72 bp CAGTCCCAGCCCACGTGCGGCTACCGTTCACACCTGTaGACCCACGCACGTCCACGCCCCGAACTCACCCCT +
Preference number: 6 (lower is better)
Translates to: QSQPTCGYRSHL*THARPRPELTP
Trigger: AGGGGTGAGTTCGGGGCGTGGACGTGCGTGGGTTCACAGGTGTGAACGGTAGCCGCACGTGGGCTGGGACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592044.1
CDS GCA 72 bp AACACGTGGTTCAGGATGTCCACTTCCCGCTCCGCCTaGAGAACCGCCAGGTCAGGACCCCGGGGACCCAGG +
Preference number: 6 (lower is better)
Translates to: NTWFRMSTSRSA*RTARSGPRGPR
Trigger: CCTGGGTCCCCGGGGTCCTGACCTGGCGGTTCTGCAGGCGGAGCGGGAAGTGGACATCCTGAACCACGTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000590232.1
ENST00000592824.5
CDS GCA 72 bp TCCCAGCCTCGGCCCTGCTGTGTCGCTTGGGTCACCTaGCGGCGCCTCCGCTCGTGCTGTAGCTGTTTCTCA +
Preference number: 6 (lower is better)
Translates to: SQPRPCCVAWVT*RRLRSCCSCFS
Trigger: TGAGAAACAGCTACAGCACGAGCGGAGGCGCCGGCAGGTGACCCAAGCGACACAGCAGGGCCGAGGCTGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586329.5
ENST00000588359.5
ENST00000589362.5
ENST00000592102.5
CDS CCA 72 bp TCTTTGTCCTCCAGCAGCGAGCGCTGCACGGTGACCTaGCTGTACACACGTGCCCCCTCCTCGGGGCTCACC +
Preference number: 6 (lower is better)
Translates to: SLSSSSERCTVT*LYTRAPSSGLT
Trigger: GGTGAGCCCCGAGGAGGGGGCACGTGTGTACAGCCAGGTCACCGTGCAGCGCTCGCTGCTGGAGGACAAAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000587715.1
ENST00000587901.1
ENST00000588359.5
ENST00000589362.5
ENST00000592102.5
CDS CAA 90 bp GAGTCCCCCAGCGAGGTCCAGAGCTCGTTTTCACGTGGAGTGACGTaGTCCCGCAGCAGCGCCACGGCATCCGATGTCAGATGCGGCCGC +
Preference number: 6 (lower is better)
Translates to: ESPSEVQSSFSRGVT*SRSSATASDVRCGR
Trigger: GCGGCCGCATCTGACATCGGATGCCGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGACCTCGCTGGGGGACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000588359.5
ENST00000589362.5
ENST00000590610.5
ENST00000592102.5
ENST00000592284.5
ENST00000592824.5
CDS CAA 90 bp CTCGGTCCCGAGCGGCCCTGGGCCAGGCGCGCCTGCAGTTCCTCGTaGACGATGAGCATCTGGGAGAATTTCTCCTTCTCGCTGGGGTCC +
Preference number: 6 (lower is better)
Translates to: LGPERPWARRACSSS*TMSIWENFSFSLGS
Trigger: GGACCCCAGCGAGAAGGAGAAATTCTCCCAGATGCTCATCGTCAACGAGGAACTGCAGGCGCGCCTGGCCCAGGGCCGCTCGGGACCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
ENST00000589362.5
ENST00000592102.5
CDS TCA 72 bp CCCCCAGCGAGGTCCAGAGCTCGTTTTCACGTGGAGTaGCGTTGTCCCGCAGCAGCGCCACGGCATCCGATG +
Preference number: 6 (lower is better)
Translates to: PPARSRARFHVE*RCPAAAPRHPM
Trigger: CATCGGATGCCGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGACCTCGCTGGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000588359.5
ENST00000589362.5
ENST00000590610.5
ENST00000592102.5
ENST00000592284.5
ENST00000592824.5
CDS TCA 72 bp AACGTCACCAGGTGCCTGTGGCGGTGCTCATGGTGCTaGGTGGTAGCTCCTGCCCACCTGGAGGTGCCCTGC +
Preference number: 6 (lower is better)
Translates to: NVTRCLWRCSWC*VVAPAHLEVPC
Trigger: GCAGGGCACCTCCAGGTGGGCAGGAGCTACCACTCAGCACCATGAGCACCGCCACAGGCACCTGGTGACGTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540810.5
CDS CCA 72 bp AGCTCCTCCTTGGAGGCCGGGTCGAGCAGCGTGACATaGTCGGGAGACACTCGCAGCAGCATCTCCTGTGCC +
Preference number: 6 (lower is better)
Translates to: SSSLEAGSSSVT*SGDTRSSISCA
Trigger: GGCACAGGAGATGCTGCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGGCCTCCAAGGAGGAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000591219.5
ENST00000592318.1
ENST00000592824.5
CDS CCA 72 bp CGAGTCCCCCAGCGAGGTCCAGAGCTCGTTTTCACGTaGAGTGACGTTGTCCCGCAGCAGCGCCACGGCATC +
Preference number: 6 (lower is better)
Translates to: RVPQRGPELVFT*SDVVPQQRHGI
Trigger: GATGCCGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGACCTCGCTGGGGGACTCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000588359.5
ENST00000589362.5
ENST00000590610.5
ENST00000592102.5
ENST00000592284.5
ENST00000592824.5
CDS CCA 72 bp ACCCAGTCCGGGTGGTTCCTCGCCCCCACCTCGTCCTaGCTGCTCCCCCAGATCCTTCTTGGCCATGTTCTG +
Preference number: 6 (lower is better)
Translates to: TQSGWFLAPTSS*LLPQILLGHVL
Trigger: CAGAACATGGCCAAGAAGGATCTGGGGGAGCAGCCAGGACGAGGTGGGGGCGAGGAACCACCCGGACTGGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592044.1
CDS CAA 72 bp TTGCCGCGCAGCCGGGCCAGCAGGCTGAAGGCGTACTaGATCTTCTGCAGCACGTCGGTGTACTCGGCCTCC +
Preference number: 6 (lower is better)
Translates to: LPRSRASRLKAY*IFCSTSVYSAS
Trigger: GGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGCCCGGCTGCGCGGCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000589362.5
ENST00000590610.5
ENST00000592824.5
CDS CAA 72 bp GGCGGGCGCGTCCTCACCAGCAGGCTGAAGGCGTACTaGATCTTCTGCAGCACGTCGGTGTACTCGGCCTCC +
Preference number: 6 (lower is better)
Translates to: GGRVLTSRLKAY*IFCSTSVYSAS
Trigger: GGAGGCCGAGTACACCGACGTGCTGCAGAAGATCAAGTACGCCTTCAGCCTGCTGGTGAGGACGCGCCCGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592102.5
ENST00000592284.5
CDS TCA 72 bp ACTCCAGCTCCTCCTTGGAGGCCGGGTCGAGCAGCGTaGCATGGTCGGGAGACACTCGCAGCAGCATCTCCT +
Preference number: 6 (lower is better)
Translates to: TPAPPWRPGRAA*HGRETLAAASP
Trigger: AGGAGATGCTGCTGCGAGTGTCTCCCGACCATGTCACGCTGCTCGACCCGGCCTCCAAGGAGGAGCTGGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000591219.5
ENST00000592318.1
ENST00000592824.5
CDS TCA 72 bp GGGAGAATTTCTCCTTCTCGCTGGGGTCCAAGCCGTTaGGGCTATCGCAGCTGTCCCAGCGGGGCCTGTCCC +
Preference number: 6 (lower is better)
Translates to: GRISPSRWGPSR*GYRSCPSGACP
Trigger: GGGACAGGCCCCGCTGGGACAGCTGCGATAGCCTCAACGGCTTGGACCCCAGCGAGAAGGAGAAATTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
ENST00000589362.5
ENST00000592102.5
CDS GCA 72 bp GCCGCACACTGCTCGCGAACCCCACCTCGTCCTGGCTaGTCCCCCAGATCCTTCTTGGCCATGTTCTGTTCA +
Preference number: 6 (lower is better)
Translates to: AAHCSRTPPRPG*SPRSFLAMFCS
Trigger: TGAACAGAACATGGCCAAGAAGGATCTGGGGGAGCAGCCAGGACGAGGTGGGGTTCGCGAGCAGTGTGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588359.5
CDS GCA 72 bp AGCAATGGCGAGGACGATGGCCTTTCTTCCCATGCGTaGTGCAAGGGAGGACACGAGGGGCTCTGCCAAGGC +
Preference number: 6 (lower is better)
Translates to: SNGEDDGLSSHA*CKGGHEGLCQG
Trigger: GCCTTGGCAGAGCCCCTCGTGTCCTCCCTTGCAGCACGCATGGGAAGAAAGGCCATCGTCCTCGCCATTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586329.5
CDS GCA 72 bp AGTCCGGGTGGTTCCTCGCCCCCACCTCGTCCTGGCTaGTCCCCCAGATCCTTCTTGGCCATGTTCTGTTCA +
Preference number: 6 (lower is better)
Translates to: SPGGSSPPPRPG*SPRSFLAMFCS
Trigger: TGAACAGAACATGGCCAAGAAGGATCTGGGGGAGCAGCCAGGACGAGGTGGGGGCGAGGAACCACCCGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592044.1
CDS CAA 72 bp CGACTGTCATCCAGGACCTCCAGTACGTCCCGCTGCTaGACCGACAGCTCACTGCTGTTGCGGGCCTGGAAG +
Preference number: 6 (lower is better)
Translates to: RLSSRTSSTSRC*TDSSLLLRAWK
Trigger: CTTCCAGGCCCGCAACAGCAGTGAGCTGTCGGTCAAGCAGCGGGACGTACTGGAGGTCCTGGATGACAGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000585347.5
ENST00000588359.5
ENST00000589362.5
ENST00000589694.1
ENST00000592102.5
CDS CAA 72 bp TGGGAGAATTTCTCCTTCTCGCTGGGGTCCAAGCCGTaGAGGCTATCGCAGCTGTCCCAGCGGGGCCTGTCC +
Preference number: 6 (lower is better)
Translates to: WENFSFSLGSKP*RLSQLSQRGLS
Trigger: GGACAGGCCCCGCTGGGACAGCTGCGATAGCCTCAACGGCTTGGACCCCAGCGAGAAGGAGAAATTCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
ENST00000589362.5
ENST00000592102.5
CDS TCA 72 bp GCATCTCCTGTGCCCAGACTCGGCCCTGGCTATCCATaGCGGCCAACTTCCTGGAGGCATCCTCCACGGTAT +
Preference number: 6 (lower is better)
Translates to: ASPVPRLGPGYP*RPTSWRHPPRY
Trigger: ATACCGTGGAGGATGCCTCCAGGAAGTTGGCCGTCATGGATAGCCAGGGCCGAGTCTGGGCACAGGAGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000591219.5
ENST00000592318.1
ENST00000592824.5
CDS TCA 72 bp GACTGTCATCCAGGACCTCCAGTACGTCCCGCTGCTTaGCCGACAGCTCACTGCTGTTGCGGGCCTGGAAGT +
Preference number: 6 (lower is better)
Translates to: DCHPGPPVRPAA*PTAHCCCGPGS
Trigger: ACTTCCAGGCCCGCAACAGCAGTGAGCTGTCGGTCAAGCAGCGGGACGTACTGGAGGTCCTGGATGACAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000585347.5
ENST00000588359.5
ENST00000589362.5
ENST00000589694.1
ENST00000592102.5
CDS GCA 72 bp ATGACGGCCAACTTCCTGGAGGCATCCTCCACGGTATaGACGCCATCGTCCTCACCCAGGCAGAACGTCACC +
Preference number: 6 (lower is better)
Translates to: MTANFLEASSTV*TPSSSPRQNVT
Trigger: GGTGACGTTCTGCCTGGGTGAGGACGATGGCGTGCATACCGTGGAGGATGCCTCCAGGAAGTTGGCCGTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000201647.11
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000591219.5
ENST00000592318.1
ENST00000592824.5
CDS GCA 72 bp TTACGACTGTCATCCAGGACCTCCAGTACGTCCCGCTaGTTGACCGACAGCTCACTGCTGTTGCGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: LRLSSRTSSTSR*LTDSSLLLRAW
Trigger: CCAGGCCCGCAACAGCAGTGAGCTGTCGGTCAAGCAGCGGGACGTACTGGAGGTCCTGGATGACAGTCGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000585347.5
ENST00000588359.5
ENST00000589362.5
ENST00000589694.1
ENST00000592102.5
CDS GCA 72 bp GAGGAGTCCGTTCTCCCACGGGGCCTCGTCACTCTTTaGGAAGGGCGCCTGGCAGGTCAAATGACCTCCATT +
Preference number: 6 (lower is better)
Translates to: EESVLPRGLVTL*EGRLAGQMTSI
Trigger: AATGGAGGTCATTTGACCTGCCAGGCGCCCTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000587715.1
ENST00000587901.1
ENST00000588359.5
ENST00000589362.5
ENST00000592102.5
CDS CCA 72 bp CCCAGCCCGGACAATCATGTCACGCCCACCCGGCGATaGTCCAATCAGAACAGCATTCTAGCTCTAGCGGGG +
Preference number: 6 (lower is better)
Translates to: PSPDNHVTPTRR*SNQNSILALAG
Trigger: CCCCGCTAGAGCTAGAATGCTGTTCTGATTGGACCATCGCCGGGTGGGCGTGACATGATTGTCCGGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587715.1
CDS CAA 72 bp AGCGAGGTCCAGAGCTCGTTTTCACGTGGAGTGACGTaGTCCCGCAGCAGCGCCACGGCATCCGATGTCAGA +
Preference number: 6 (lower is better)
Translates to: SEVQSSFSRGVT*SRSSATASDVR
Trigger: TCTGACATCGGATGCCGTGGCGCTGCTGCGGGACAACGTCACTCCACGTGAAAACGAGCTCTGGACCTCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000588359.5
ENST00000589362.5
ENST00000590610.5
ENST00000592102.5
ENST00000592284.5
ENST00000592824.5
CDS CCA 72 bp AGGCGCGCCTGCAGTTCCTCGTTGACGATGAGCATCTaGGAGAATTTCTCCTTCTCGCTGGGGTCCAAGCCG +
Preference number: 6 (lower is better)
Translates to: RRACSSSLTMSI*ENFSFSLGSKP
Trigger: CGGCTTGGACCCCAGCGAGAAGGAGAAATTCTCCCAGATGCTCATCGTCAACGAGGAACTGCAGGCGCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000588359.5
ENST00000589362.5
ENST00000592102.5
CDS CAA 72 bp GCTCCGCCTCGTCCTGGCTGCTCCCCCAGATCCTTCTaGGCCATGTTCTGTTCATGTCCTCATCCCACCTTC +
Preference number: 6 (lower is better)
Translates to: APPRPGCSPRSF*AMFCSCPHPTF
Trigger: GAAGGTGGGATGAGGACATGAACAGAACATGGCCAAGAAGGATCTGGGGGAGCAGCCAGGACGAGGCGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000245618.5
CDS CAA 72 bp CCCCCACCTCGTCCTGGCTGCTCCCCCAGATCCTTCTaGGCCATGTTCTGTTCATGTCCTCATCCCACCTTC +
Preference number: 6 (lower is better)
Translates to: PPPRPGCSPRSF*AMFCSCPHPTF
Trigger: GAAGGTGGGATGAGGACATGAACAGAACATGGCCAAGAAGGATCTGGGGGAGCAGCCAGGACGAGGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592044.1
CDS GCA 72 bp TCTGACACTTTCTCTTTGTCCTCCAGTACGTCCCGCTaGTTGACCGACAGCTCACTGCTGTTGCGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: SDTFSLSSSTSR*LTDSSLLLRAW
Trigger: CCAGGCCCGCAACAGCAGTGAGCTGTCGGTCAAGCAGCGGGACGTACTGGAGGACAAAGAGAAAGTGTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586329.5
CDS CAA 72 bp ACCCCACCTCGTCCTGGCTGCTCCCCCAGATCCTTCTaGGCCATGTTCTGTTCATGTCCTCATCCCACCTTC +
Preference number: 6 (lower is better)
Translates to: TPPRPGCSPRSF*AMFCSCPHPTF
Trigger: GAAGGTGGGATGAGGACATGAACAGAACATGGCCAAGAAGGATCTGGGGGAGCAGCCAGGACGAGGTGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588359.5
CDS CAA 72 bp GACACTTTCTCTTTGTCCTCCAGTACGTCCCGCTGCTaGACCGACAGCTCACTGCTGTTGCGGGCCTGGAAG +
Preference number: 6 (lower is better)
Translates to: DTFSLSSSTSRC*TDSSLLLRAWK
Trigger: CTTCCAGGCCCGCAACAGCAGTGAGCTGTCGGTCAAGCAGCGGGACGTACTGGAGGACAAAGAGAAAGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586329.5
CDS CAA 90 bp GGTTCCTCGCCCCCACCTCGTCCTGGCTGCTCCCCCAGATCCTTCTaGGCCATGTTCTGTTCATGTCCTCATCCCACCTTCATGTTCTAT +
Preference number: 6 (lower is better)
Translates to: GSSPPPRPGCSPRSF*AMFCSCPHPTFMFY
Trigger: ATAGAACATGAAGGTGGGATGAGGACATGAACAGAACATGGCCAAGAAGGATCTGGGGGAGCAGCCAGGACGAGGTGGGGGCGAGGAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592044.1
CDS TCA 72 bp ACACTTTCTCTTTGTCCTCCAGTACGTCCCGCTGCTTaGCCGACAGCTCACTGCTGTTGCGGGCCTGGAAGT +
Preference number: 6 (lower is better)
Translates to: TLSLCPPVRPAA*PTAHCCCGPGS
Trigger: ACTTCCAGGCCCGCAACAGCAGTGAGCTGTCGGTCAAGCAGCGGGACGTACTGGAGGACAAAGAGAAAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586329.5
CDS GCA 72 bp GTGTTCACAATCATCTGCAGAGGCCCGAAAAGGAAGTaGAACAGCTCCGGAGAGGAGGGGTCGGCGATGTTG +
Preference number: 6 (lower is better)
Translates to: VFTIICRGPKRK*NSSGEEGSAML
Trigger: CAACATCGCCGACCCCTCCTCTCCGGAGCTGTTGCACTTCCTTTTCGGGCCTCTGCAGATGATTGTGAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000589362.5
ENST00000590610.5
ENST00000592102.5
ENST00000592284.5
ENST00000592824.5
CDS CCA 72 bp AGCCTCGATACAAAGCTCTCTACGTCGTCGAACACGTaGTTCAGGATGTCCACTTCCCGCTCCGCCTGCAGA +
Preference number: 6 (lower is better)
Translates to: SLDTKLSTSSNT*FRMSTSRSACR
Trigger: TCTGCAGGCGGAGCGGGAAGTGGACATCCTGAACCACGTGTTCGACGACGTAGAGAGCTTTGTATCGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000587786.5
ENST00000590232.1
ENST00000592824.5
CDS CAA 90 bp CTCGGATCAGCTCCGCCTCGTCCTGGCTGCTCCCCCAGATCCTTCTaGGCCATGTTCTGTTCATGTCCTCATCCCACCTTCATGTTCTAT +
Preference number: 6 (lower is better)
Translates to: LGSAPPRPGCSPRSF*AMFCSCPHPTFMFY
Trigger: ATAGAACATGAAGGTGGGATGAGGACATGAACAGAACATGGCCAAGAAGGATCTGGGGGAGCAGCCAGGACGAGGCGGAGCTGATCCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000245618.5
CDS CAA 90 bp TGCTCGCGAACCCCACCTCGTCCTGGCTGCTCCCCCAGATCCTTCTaGGCCATGTTCTGTTCATGTCCTCATCCCACCTTCATGTTCTAT +
Preference number: 6 (lower is better)
Translates to: CSRTPPRPGCSPRSF*AMFCSCPHPTFMFY
Trigger: ATAGAACATGAAGGTGGGATGAGGACATGAACAGAACATGGCCAAGAAGGATCTGGGGGAGCAGCCAGGACGAGGTGGGGTTCGCGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588359.5
CDS TCA 72 bp TCGTCACTCTTTGCGAAGGGCGCCTGGCAGGTCAAATaGCCTCCATTTCCACCTCGCCTTCCACCTTCTTCT +
Preference number: 6 (lower is better)
Translates to: SSLFAKGAWQVK*PPFPPRLPPSS
Trigger: AGAAGAAGGTGGAAGGCGAGGTGGAAATGGAGGTCATTTGACCTGCCAGGCGCCCTTCGCAAAGAGTGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000201647.11
ENST00000245618.5
ENST00000540810.5
ENST00000586329.5
ENST00000587715.1
ENST00000587901.1
ENST00000588359.5
ENST00000589362.5
ENST00000592102.5
CDS TCA 72 bp CTGTTCATGTCCTCATCCCACCTTCATGTTCTATCTTaGCCCTGGGTCCAATCTCAAACCCCACTGCCTTCC +
Preference number: 6 (lower is better)
Translates to: LFMSSSHLHVLS*PWVQSQTPLPS
Trigger: GGAAGGCAGTGGGGTTTGAGATTGGACCCAGGGTCAAGATAGAACATGAAGGTGGGATGAGGACATGAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245618.5
ENST00000588359.5
CDS CAA 90 bp TGGCCATGTTCTGTTCATGTCCTCATCCCACCTTCATGTTCTATCTaGACCCTGGGTCCAATCTCAAACCCCACTGCCTTCCAGAACTTC +
Preference number: 6 (lower is better)
Translates to: WPCSVHVLIPPSCSI*TLGPISNPTAFQNF
Trigger: GAAGTTCTGGAAGGCAGTGGGGTTTGAGATTGGACCCAGGGTCAAGATAGAACATGAAGGTGGGATGAGGACATGAACAGAACATGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245618.5
ENST00000588359.5
CDS CAA 72 bp TCTGTTCATGTCCTCATCCCACCTTCATGTTCTATCTaGACCCTGGGTCCAATCTCAAACCCCACTGCCTTC +
Preference number: 6 (lower is better)
Translates to: SVHVLIPPSCSI*TLGPISNPTAF
Trigger: GAAGGCAGTGGGGTTTGAGATTGGACCCAGGGTCAAGATAGAACATGAAGGTGGGATGAGGACATGAACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000245618.5
ENST00000588359.5