RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPS8 (Homo sapiens)

Ensembl gene IDs: ENSG00000151491

Ensembl transcript IDs: ENST00000281172.10, ENST00000508018.2, ENST00000535734.5, ENST00000535752.5, ENST00000536793.5, ENST00000536956.5, ENST00000542903.1, ENST00000543468.5, ENST00000543523.5, ENST00000543612.5, ENST00000544064.1, ENST00000545999.1, ENST00000546261.1, ENST00000546311.5, ENST00000642278.1, ENST00000642939.1, ENST00000644374.1, ENST00000645775.1, ENST00000646123.1, ENST00000646828.1, ENST00000646918.1, ENST00000647087.1, ENST00000647224.1

Found 1006 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACTCGGAGCTGCCACTGCTATCCTCCAATGCAGCTTTTTGTACAGTaGTTTGGCTATAGACTCTCGCCCCTTCAGGGCAGACTGTCCTCA +
Preference number: 1 (lower is better)
Translates to: TRSCHCYPPMQLFVQ*FGYRLSPLQGRLSS
Trigger: TGAGGACAGTCTGCCCTGAAGGGGCGAGAGTCTATAGCCAAATCACTGTACAAAAAGCTGCATTGGAGGATAGCAGTGGCAGCTCCGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR GCA 90 bp GTCTCTGGCTGTCTCGCACGATACTGCCACCACTGTCACTGGAGCTaGTGTTTTGACGTGTTATATTTGCTGGGACCTTTGACACAGGAA +
Preference number: 1 (lower is better)
Translates to: VSGCLARYCHHCHWS*CFDVLYLLGPLTQE
Trigger: TTCCTGTGTCAAAGGTCCCAGCAAATATAACACGTCAAAACAGCAGCTCCAGTGACAGTGGTGGCAGTATCGTGCGAGACAGCCAGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR GCA 90 bp GGTCCACCGGAAGTTGTTTGTGTCTCTGGCTGTCTCGCACGATACTaGCACCACTGTCACTGGAGCTGCTGTTTTGACGTGTTATATTTG +
Preference number: 1 (lower is better)
Translates to: GPPEVVCVSGCLARY*HHCHWSCCFDVLYL
Trigger: CAAATATAACACGTCAAAACAGCAGCTCCAGTGACAGTGGTGGCAGTATCGTGCGAGACAGCCAGAGACACAAACAACTTCCGGTGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR CCA 90 bp TGGTGTGGAGTCGTAAGTGATATTGATAACTGGCACGTTCTGCCGTaGCACATGGAATTTCTTCTGAGCGGCACTCCGACCAATGGTCAG +
Preference number: 1 (lower is better)
Translates to: WCGVVSDIDNWHVLP*HMEFLLSGTPTNGQ
Trigger: CTGACCATTGGTCGGAGTGCCGCTCAGAAGAAATTCCATGTGCCACGGCAGAACGTGCCAGTTATCAATATCACTTACGACTCCACACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR TCA 90 bp GGAATTTCTTCTGAGCGGCACTCCGACCAATGGTCAGTCTGTGGATaGGTTCATCTTGCACTTCCTCCATCTGAGATTTCCTTCGGTCCA +
Preference number: 1 (lower is better)
Translates to: GISSERHSDQWSVCG*VHLALPPSEISFGP
Trigger: TGGACCGAAGGAAATCTCAGATGGAGGAAGTGCAAGATGAACTCATCCACAGACTGACCATTGGTCGGAGTGCCGCTCAGAAGAAATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR TCA 90 bp CTGTCAATGCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCATaGTACTGCCTTGGTTTCTCAACTTTTACCCTTCTCCACTGCCAG +
Preference number: 1 (lower is better)
Translates to: LSMRAAIISGVSSCS*YCLGFSTFTLLHCQ
Trigger: CTGGCAGTGGAGAAGGGTAAAAGTTGAGAAACCAAGGCAGTATCATGAGCAGGAAGAAACACCTGAGATGATGGCAGCCCGCATTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546261.1
3UTR CCA 90 bp GTTTGTGTCTCTGGCTGTCTCGCACGATACTGCCACCACTGTCACTaGAGCTGCTGTTTTGACGTGTTATATTTGCTGGGACCTTTGACA +
Preference number: 1 (lower is better)
Translates to: VCVSGCLARYCHHCH*SCCFDVLYLLGPLT
Trigger: TGTCAAAGGTCCCAGCAAATATAACACGTCAAAACAGCAGCTCCAGTGACAGTGGTGGCAGTATCGTGCGAGACAGCCAGAGACACAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR CCA 90 bp CGTCTTCACATCCTCTGGTGTGGAGTCGTAAGTGATATTGATAACTaGCACGTTCTGCCGTGGCACATGGAATTTCTTCTGAGCGGCACT +
Preference number: 1 (lower is better)
Translates to: RLHILWCGVVSDIDN*HVLPWHMEFLLSGT
Trigger: AGTGCCGCTCAGAAGAAATTCCATGTGCCACGGCAGAACGTGCCAGTTATCAATATCACTTACGACTCCACACCAGAGGATGTGAAGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR TCA 90 bp ATATTGATAACTGGCACGTTCTGCCGTGGCACATGGAATTTCTTCTaGGCGGCACTCCGACCAATGGTCAGTCTGTGGATGAGTTCATCT +
Preference number: 1 (lower is better)
Translates to: ILITGTFCRGTWNFF*AALRPMVSLWMSSS
Trigger: AGATGAACTCATCCACAGACTGACCATTGGTCGGAGTGCCGCTCAGAAGAAATTCCATGTGCCACGGCAGAACGTGCCAGTTATCAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR CCA 90 bp TTGATAAAGATCTTGTTCCATTGTGGCTCCCATAAAGTTCAGCATTaGGGGCTCCCAGCCATTGCGGAATCGTGGAACATATGGTGGAAT +
Preference number: 1 (lower is better)
Translates to: LIKILFHCGSHKVQH*GLPAIAESWNIWWN
Trigger: ATTCCACCATATGTTCCACGATTCCGCAATGGCTGGGAGCCCCCAATGCTGAACTTTATGGGAGCCACAATGGAACAAGATCTTTATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR TCA 90 bp GACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTGAATaGCAGACACCATATTCACAGGCAAAATCGAAACTGCTTAGATTT +
Preference number: 1 (lower is better)
Translates to: DLSKQRLAYSELCPE*QTPYSQAKSKLLRF
Trigger: AAATCTAAGCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
3UTR GCA 90 bp TATTTCCTGTTTGCGCTGATGTTCTGCTACATTTGCCACAGATTCTaGCAGTTGATAAAGATCTTGTTCCATTGTGGCTCCCATAAAGTT +
Preference number: 1 (lower is better)
Translates to: YFLFALMFCYICHRF*QLIKILFHCGSHKV
Trigger: AACTTTATGGGAGCCACAATGGAACAAGATCTTTATCAACTGGCAGAATCTGTGGCAAATGTAGCAGAACATCAGCGCAAACAGGAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR CCA 90 bp TATAGTATGAGTATAAGGTGGATCAGCACGCCCCAATCCAGATTCTaGAGGTCTCACAATATCCAAAATGTTATTTGGCACAAATCCAGA +
Preference number: 1 (lower is better)
Translates to: YSMSIRWISTPQSRF*RSHNIQNVIWHKSR
Trigger: TCTGGATTTGTGCCAAATAACATTTTGGATATTGTGAGACCTCCAGAATCTGGATTGGGGCGTGCTGATCCACCTTATACTCATACTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR GCA 90 bp CACAATATCCAAAATGTTATTTGGCACAAATCCAGAGTCTCCACTTaGATTTCGAACTTTCCACCATTGCTTCCGATCATCAAGTATCTC +
Preference number: 1 (lower is better)
Translates to: HNIQNVIWHKSRVST*ISNFPPLLPIIKYL
Trigger: GAGATACTTGATGATCGGAAGCAATGGTGGAAAGTTCGAAATGCAAGTGGAGACTCTGGATTTGTGCCAAATAACATTTTGGATATTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR TCA 90 bp GCACACCAATGCAGACTACTTCCTTTGCTAGATTTTGAGAAGACATaGCCTCTTTCGCATTTGTGCTTTCTCATATATAAGAACACAGTA +
Preference number: 1 (lower is better)
Translates to: AHQCRLLPLLDFEKT*PLSHLCFLIYKNTV
Trigger: TACTGTGTTCTTATATATGAGAAAGCACAAATGCGAAAGAGGTCATGTCTTCTCAAAATCTAGCAAAGGAAGTAGTCTGCATTGGTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
3UTR GCA 90 bp TATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTaGTTAGATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGT +
Preference number: 1 (lower is better)
Translates to: YALNDRHHIHRQNRN*LDFESWTTLLLCCS
Trigger: ACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAATCTAAGCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
3UTR-3UTR CCA 90 bp CTCTGGTGTGGAGTCGTAAGTGATATTGATAACTGGCACGTTCTGCCGTGGCACCACAGGAACAGGTGCTaGAGTGGAAGGGGGAAGGGG +
Preference number: 2 (lower is better)
Translates to: LWCGVVSDIDNWHVLPWHHRNRC*SGRGKG
Trigger: CCCCTTCCCCCTTCCACTCCAGCACCTGTTCCTGTG...GTGCCACGGCAGAACGTGCCAGTTATCAATATCACTTACGACTCCACACCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR CAA 90 bp CTGAGCGGCACTCCGACCAATGGTCAGTCTGTGGATGAGTTCATCTaGCACTTCCTCCATCTGAGATTTCCTTCGGTCCACCGGAAGTTG +
Preference number: 2 (lower is better)
Translates to: LSGTPTNGQSVDEFI*HFLHLRFPSVHRKL
Trigger: CAACTTCCGGTGGACCGAAGGAAATCTCAGATGGAGGAAGTGCAAGATGAACTCATCCACAGACTGACCATTGGTCGGAGTGCCGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR CAA 90 bp TACTGCCACCACTGTCACTGGAGCTGCTGTTTTGACGTGTTATATTaGCTGGGACCTTTGACACAGGAACAGGTGCTGGAGTGGAAGGGG +
Preference number: 2 (lower is better)
Translates to: YCHHCHWSCCFDVLY*LGPLTQEQVLEWKG
Trigger: CCCCTTCCACTCCAGCACCTGTTCCTGTGTCAAAGGTCCCAGCAAATATAACACGTCAAAACAGCAGCTCCAGTGACAGTGGTGGCAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR CAA 90 bp GGAGCTGCCACTGCTATCCTCCAATGCAGCTTTTTGTACAGTGATTaGGCTATAGACTCTCGCCCCTTCAGGGCAGACTGTCCTCAGTTC +
Preference number: 2 (lower is better)
Translates to: GAATAILQCSFLYSD*AIDSRPFRADCPQF
Trigger: GAACTGAGGACAGTCTGCCCTGAAGGGGCGAGAGTCTATAGCCAAATCACTGTACAAAAAGCTGCATTGGAGGATAGCAGTGGCAGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR-3UTR TCA 90 bp CATCTGAGATTTCCTTCGGTCCACCGGAAGTTGTTTGTGTCTCTGGCTGTCTCGGGCTGGATGATACTCTaGTACACTGGAATGCTCTGT +
Preference number: 2 (lower is better)
Translates to: HLRFPSVHRKLFVSLAVSGWMIL*YTGMLC
Trigger: ACAGAGCATTCCAGTGTATCAGAGTATCATCCAGCC...CGAGACAGCCAGAGACACAAACAACTTCCGGTGGACCGAAGGAAATCTCAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR-3UTR GCA 90 bp ATCTCTGTCAATGCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCATGATAGCACATCTCTGTCAATaGGGGCTGCCATCATCTCAG +
Preference number: 2 (lower is better)
Translates to: ISVNAGCHHLRCFFLLMIAHLCQ*GLPSSQ
Trigger: CTGAGATGATGGCAGCCCGCATTGACAGAGATGTGC...TATCATGAGCAGGAAGAAACACCTGAGATGATGGCAGCCCGCATTGACAGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543468.5
ENST00000546261.1
3UTR-3UTR CCA 90 bp GGAGCTGCCACTGCTATCCTCCAATGCAGCTTTTTGTACAGTGATTTGGCTATAACAGCAGCTTCCCCTTaGTCCAGGTGGGATCCTCTT +
Preference number: 2 (lower is better)
Translates to: GAATAILQCSFLYSDLAITAASP*SRWDPL
Trigger: AAGAGGATCCCACCTGGACCAAGGGGAAGCTGCTGT...TATAGCCAAATCACTGTACAAAAAGCTGCATTGGAGGATAGCAGTGGCAGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR-3UTR CCA 90 bp GTTGTTTGTGTCTCTGGCTGTCTCGCACGATACTGCCACCACTGTCACTGGAGCATGGCGATTAGAAGTTaGCTTAAAAGCAACAGCAGC +
Preference number: 2 (lower is better)
Translates to: VVCVSGCLARYCHHCHWSMAIRS*LKSNSS
Trigger: GCTGCTGTTGCTTTTAAGCCAACTTCTAATCGCCAT...GCTCCAGTGACAGTGGTGGCAGTATCGTGCGAGACAGCCAGAGACACAAACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR-3UTR CCA 90 bp CATCTGAGATTTCCTTCGGTCCACCGGAAGTTGTTTGTGTCTCTGGCTGTCTCGAGTATGAGTATAAGGTaGATCAGCACGCCCCAATCC +
Preference number: 2 (lower is better)
Translates to: HLRFPSVHRKLFVSLAVSSMSIR*ISTPQS
Trigger: GGATTGGGGCGTGCTGATCCACCTTATACTCATACT...CGAGACAGCCAGAGACACAAACAACTTCCGGTGGACCGAAGGAAATCTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR-3UTR TCA 90 bp GTTGTTTGTGTCTCTGGCTGTCTCGCACGATACTGCCACCACTGTCACTGGAGCGGAGTAAACAAAAAGTaGACCAAATCTGCAGCACTA +
Preference number: 2 (lower is better)
Translates to: VVCVSGCLARYCHHCHWSGVNKK*TKSAAL
Trigger: TAGTGCTGCAGATTTGGTTCACTTTTTGTTTACTCC...GCTCCAGTGACAGTGGTGGCAGTATCGTGCGAGACAGCCAGAGACACAAACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR-3UTR TCA 90 bp CTCTGGTGTGGAGTCGTAAGTGATATTGATAACTGGCACGTTCTGCCGTGGCACATTTCCTGTTTGCGCTaGTGTTCTGCTACATTTGCC +
Preference number: 2 (lower is better)
Translates to: LWCGVVSDIDNWHVLPWHISCLR*CSATFA
Trigger: GGCAAATGTAGCAGAACATCAGCGCAAACAGGAAAT...GTGCCACGGCAGAACGTGCCAGTTATCAATATCACTTACGACTCCACACCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR-3UTR TCA 90 bp CAATGCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCATGATACTGCCTTGAGCCAACCACTGTCCTaGCAACCTTTCCATGAATAT +
Preference number: 2 (lower is better)
Translates to: QCGLPSSQVFLPAHDTALSQPLS*QPFHEY
Trigger: ATATTCATGGAAAGGTTGTCAGGACAGTGGTTGGCT...CAAGGCAGTATCATGAGCAGGAAGAAACACCTGAGATGATGGCAGCCCGCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546261.1
3UTR-3UTR TCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTGAGCTATGCCCTGAATaGCAGACACCATATTCACAG +
Preference number: 2 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPELCPE*QTPYSQ
Trigger: CTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTC...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
3UTR-3UTR TCA 90 bp TCTATCTATATGGCGATTAGAAGTTGGCTTAAAAGCAACAGCAGCTTCCCCTTGCCAAGTTCCTCCCAATaGCATCCACAGCTGCCGTTC +
Preference number: 2 (lower is better)
Translates to: SIYMAIRSWLKSNSSFPLPSSSQ*HPQLPF
Trigger: GAACGGCAGCTGTGGATGTCATTGGGAGGAACTTGG...CAAGGGGAAGCTGCTGTTGCTTTTAAGCCAACTTCTAATCGCCATATAGATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR-3UTR GCA 90 bp TATATGGCGATTAGAAGTTGGCTTAAAAGCAACAGCAGCTTCCCCTTGGTCCAGTCTGTCAATGCGGGCTaGCATCATCTCAGGTGTTTC +
Preference number: 2 (lower is better)
Translates to: YMAIRSWLKSNSSFPLVQSVNAG*HHLRCF
Trigger: GAAACACCTGAGATGATGGCAGCCCGCATTGACAGA...CTGGACCAAGGGGAAGCTGCTGTTGCTTTTAAGCCAACTTCTAATCGCCATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR-3UTR CCA 90 bp GGAGCTGCCACTGCTATCCTCCAATGCAGCTTTTTGTACAGTGATTTGGCTATAAAATTCATCAGGAGGTaGAGGTTTTGCCCGCAGCGT +
Preference number: 2 (lower is better)
Translates to: GAATAILQCSFLYSDLAIKFIRR*RFCPQR
Trigger: ACGCTGCGGGCAAAACCTCCACCTCCTGATGAATTT...TATAGCCAAATCACTGTACAAAAAGCTGCATTGGAGGATAGCAGTGGCAGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR-3UTR TCA 90 bp GGAGCTGCCACTGCTATCCTCCAATGCAGCTTTTTGTACAGTGATTTGGCTATACTGGAGCTGCTGTTTTaGCGTGTTATATTTGCTGGG +
Preference number: 2 (lower is better)
Translates to: GAATAILQCSFLYSDLAILELLF*RVIFAG
Trigger: CCCAGCAAATATAACACGTCAAAACAGCAGCTCCAG...TATAGCCAAATCACTGTACAAAAAGCTGCATTGGAGGATAGCAGTGGCAGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR-3UTR GCA 90 bp GGAGCTGCCACTGCTATCCTCCAATGCAGCTTTTTGTACAGTGATTTGGCTATAGGACCTCCTGTTGCCTaGACCACCATATTTAATGGA +
Preference number: 2 (lower is better)
Translates to: GAATAILQCSFLYSDLAIGPPVA*TTIFNG
Trigger: TCCATTAAATATGGTGGTGCAGGCAACAGGAGGTCC...TATAGCCAAATCACTGTACAAAAAGCTGCATTGGAGGATAGCAGTGGCAGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR CAA 90 bp ATGTTCTGCTACATTTGCCACAGATTCTGCCAGTTGATAAAGATCTaGTTCCATTGTGGCTCCCATAAAGTTCAGCATTGGGGGCTCCCA +
Preference number: 2 (lower is better)
Translates to: MFCYICHRFCQLIKI*FHCGSHKVQHWGLP
Trigger: TGGGAGCCCCCAATGCTGAACTTTATGGGAGCCACAATGGAACAAGATCTTTATCAACTGGCAGAATCTGTGGCAAATGTAGCAGAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR-3UTR TCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTGTTGCTTTGTTGCAGTaGATAACTCCACCACTATCA +
Preference number: 2 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPVALLQ*ITPPLS
Trigger: TGATAGTGGTGGAGTTATTCACTGCAACAAAGCAAC...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
3UTR-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTAGCTATACAAGGAGTTaGAATCAACAGAGCCATGAC +
Preference number: 2 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPSYTRS*NQQSHD
Trigger: GTCATGGCTCTGTTGATTGCAACTCCTTGTATAGCT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
3UTR-3UTR CCA 90 bp CCGAGAGCTCACTGTTGTTCCTTGCTACAAAGTCATACTTGGATTTGGCATATTTTGGCCACTCTGCTCTaGCTTTCATCCAAGTTCCTC +
Preference number: 2 (lower is better)
Translates to: PRAHCCSLLQSHTWIWHILATLL*LSSKFL
Trigger: GAGGAACTTGGATGAAAGCCAGAGCAGAGTGGCCAA...AATATGCCAAATCCAAGTATGACTTTGTAGCAAGGAACAACAGTGAGCTCTCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR-3UTR TCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAGTTGCTTTGTTGCAGTaGATAACTCCACCACTATCA +
Preference number: 2 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRVALLQ*ITPPLS
Trigger: TGATAGTGGTGGAGTTATTCACTGCAACAAAGCAAC...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
3UTR-3UTR TCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCGTTGCTTTGTTGCAGTaGATAACTCCACCACTATCA +
Preference number: 2 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCVALLQ*ITPPLS
Trigger: TGATAGTGGTGGAGTTATTCACTGCAACAAAGCAAC...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
3UTR-3UTR TCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTCCTTTGCTAGATTTTaGGAAGACATGACCTCTTTC +
Preference number: 2 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPSFARF*EDMTSF
Trigger: GAAAGAGGTCATGTCTTCTCAAAATCTAGCAAAGGA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
3UTR-3UTR GCA 90 bp CATCTGAGATTTCCTTCGGTCCACCGGAAGTTGTTTGTGTCTCTGGCTGTCTCGCCTCTTTCGCATTTGTaGTTTCTCATATATAAGAAC +
Preference number: 2 (lower is better)
Translates to: HLRFPSVHRKLFVSLAVSPLSHL*FLIYKN
Trigger: GTTCTTATATATGAGAAAGCACAAATGCGAAAGAGG...CGAGACAGCCAGAGACACAAACAACTTCCGGTGGACCGAAGGAAATCTCAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTGTAATGCACACCAATaGAGACTACTTCCTTTGCTA +
Preference number: 2 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPCNAHQ*RLLPLL
Trigger: TAGCAAAGGAAGTAGTCTGCATTGGTGTGCATTACA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
3UTR-3UTR GCA 90 bp GTCCTCAGTTCATCCTTATTGAGAGAGAAAAGTTGTGCACCATTTAATACTCCAGCACATCTCTGTCAATaGGGGCTGCCATCATCTCAG +
Preference number: 2 (lower is better)
Translates to: VLSSSLLREKSCAPFNTPAHLCQ*GLPSSQ
Trigger: CTGAGATGATGGCAGCCCGCATTGACAGAGATGTGC...TGGAGTATTAAATGGTGCACAACTTTTCTCTCTCAATAAGGATGAACTGAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR CAA 90 bp ATCAATCAGGCTCACAGCTCTGTCATCCACTTGAAGAATCATATCTaGAGTCCACACTTTGCCCTTGGCATCAAGCAATTTCAATTTCCT +
Preference number: 2 (lower is better)
Translates to: INQAHSSVIHLKNHI*SPHFALGIKQFQFP
Trigger: AGGAAATTGAAATTGCTTGATGCCAAGGGCAAAGTGTGGACTCAAGATATGATTCTTCAAGTGGATGACAGAGCTGTGAGCCTGATTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536956.5
3UTR CAA 90 bp ATGAGACTTCAGTTTGGCCAGAAGGTTAAATCCGTGTTTAAACTTTaGGAAACAGTCAAGAAATTCATCAGGAGGTGGAGGTTTTGCCCG +
Preference number: 2 (lower is better)
Translates to: MRLQFGQKVKSVFKL*ETVKKFIRRWRFCP
Trigger: CGGGCAAAACCTCCACCTCCTGATGAATTTCTTGACTGTTTCCAAAAGTTTAAACACGGATTTAACCTTCTGGCCAAACTGAAGTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543468.5
ENST00000546261.1
3UTR-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTCCTCTTTCGCATTTGTaGTTTCTCATATATAAGAAC +
Preference number: 2 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPPLSHL*FLIYKN
Trigger: GTTCTTATATATGAGAAAGCACAAATGCGAAAGAGG...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
3UTR-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTTCCTGTTTATACCCTaGGATGGGGATAAAATAATT +
Preference number: 2 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPFLFIP*DGDKII
Trigger: AATTATTTTATCCCCATCCCAGGGTATAAACAGGAA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
3UTR-3UTR CCA 90 bp GTCCTCAGTTCATCCTTATTGAGAGAGAAAAGTTGTGCACCATTTAATACTCCAAGTATCAGCTGGTCTTaGGCCATACTCCATCCTTTG +
Preference number: 2 (lower is better)
Translates to: VLSSSLLREKSCAPFNTPSISWS*AILHPL
Trigger: CAAAGGATGGAGTATGGCCCAAGACCAGCTGATACT...TGGAGTATTAAATGGTGCACAACTTTTCTCTCTCAATAAGGATGAACTGAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR-3UTR CCA 90 bp GTCCTCAGTTCATCCTTATTGAGAGAGAAAAGTTGTGCACCATTTAATACTCCAAGTTGTTTGTGTCTCTaGCTGTCTCGCACGATACTG +
Preference number: 2 (lower is better)
Translates to: VLSSSLLREKSCAPFNTPSCLCL*LSRTIL
Trigger: CAGTATCGTGCGAGACAGCCAGAGACACAAACAACT...TGGAGTATTAAATGGTGCACAACTTTTCTCTCTCAATAAGGATGAACTGAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR-3UTR TCA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGGAGCTATGCCCTGAATaGCAGACACCATATTCACAG +
Preference number: 2 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVELCPE*QTPYSQ
Trigger: CTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTC...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
3UTR-3UTR TCA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCAGATTTTGAGAAGACATaGCCTCTTTCGCATTTGTGC +
Preference number: 2 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKADFEKT*PLSHLC
Trigger: GCACAAATGCGAAAGAGGTCATGTCTTCTCAAAATC...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
3UTR-3UTR GCA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCAAGCTATACAAGGAGTTaGAATCAACAGAGCCATGAC +
Preference number: 2 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKASYTRS*NQQSHD
Trigger: GTCATGGCTCTGTTGATTGCAACTCCTTGTATAGCT...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
3UTR-3UTR CCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATTCCTGTTTATACCCTaGGATGGGGATAAAATAATT +
Preference number: 2 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRFLFIP*DGDKII
Trigger: AATTATTTTATCCCCATCCCAGGGTATAAACAGGAA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
3UTR-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTTCCTGTTTATACCCTaGGATGGGGATAAAATAATT +
Preference number: 2 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCFLFIP*DGDKII
Trigger: AATTATTTTATCCCCATCCCAGGGTATAAACAGGAA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
3UTR-3UTR TCA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCATCCTTTGCTAGATTTTaGGAAGACATGACCTCTTTC +
Preference number: 2 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKASFARF*EDMTSF
Trigger: GAAAGAGGTCATGTCTTCTCAAAATCTAGCAAAGGA...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
3UTR-3UTR CCA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCATGCATGTCCAAGGTATaGCTGTACTTTACAGTTCAT +
Preference number: 2 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKACMSKV*LYFTVH
Trigger: ATGAACTGTAAAGTACAGCCATACCTTGGACATGCA...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
3UTR-3UTR CCA 90 bp GTTATTTGGCACAAATCCAGAGTCTCCACTTGCATTTCGAACTTTCCACCATTGAGTCATACTTGGATTTaGCATATTTCTTGGGTTGTG +
Preference number: 2 (lower is better)
Translates to: VIWHKSRVSTCISNFPPLSHTWI*HISWVV
Trigger: CACAACCCAAGAAATATGCCAAATCCAAGTATGACT...CAATGGTGGAAAGTTCGAAATGCAAGTGGAGACTCTGGATTTGTGCCAAATAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR CAA 90 bp TGGATAATCTTTTTATTTCCTGTTTGCGCTGATGTTCTGCTACATTaGCCACAGATTCTGCCAGTTGATAAAGATCTTGTTCCATTGTGG +
Preference number: 2 (lower is better)
Translates to: WIIFLFPVCADVLLH*PQILPVDKDLVPLW
Trigger: CCACAATGGAACAAGATCTTTATCAACTGGCAGAATCTGTGGCAAATGTAGCAGAACATCAGCGCAAACAGGAAATAAAAAGATTATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR CAA 90 bp TCTCTAAAATATCATCCTTTAGAACCGAGAGCTCACTGTTGTTCCTaGCTACAAAGTCATACTTGGATTTGGCATATTTCTTGGGTTGTG +
Preference number: 2 (lower is better)
Translates to: SLKYHPLEPRAHCCS*LQSHTWIWHISWVV
Trigger: CACAACCCAAGAAATATGCCAAATCCAAGTATGACTTTGTAGCAAGGAACAACAGTGAGCTCTCGGTTCTAAAGGATGATATTTTAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR CAA 90 bp TCACAATATCCAAAATGTTATTTGGCACAAATCCAGAGTCTCCACTaGCATTTCGAACTTTCCACCATTGCTTCCGATCATCAAGTATCT +
Preference number: 2 (lower is better)
Translates to: SQYPKCYLAQIQSLH*HFELSTIASDHQVS
Trigger: AGATACTTGATGATCGGAAGCAATGGTGGAAAGTTCGAAATGCAAGTGGAGACTCTGGATTTGTGCCAAATAACATTTTGGATATTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR-3UTR TCA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGCAATCAACAGAGCCATaGCAAACTCTCTTGAGAATG +
Preference number: 2 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVQSTEP*QTLLRM
Trigger: CATTCTCAAGAGAGTTTGTCATGGCTCTGTTGATTG...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
3UTR-3UTR CCA 90 bp GTCCTCAGTTCATCCTTATTGAGAGAGAAAAGTTGTGCACCATTTAATACTCCAGATACTCTGATACACTaGAATGCTCTGTGGATAATC +
Preference number: 2 (lower is better)
Translates to: VLSSSLLREKSCAPFNTPDTLIH*NALWII
Trigger: GATTATCCACAGAGCATTCCAGTGTATCAGAGTATC...TGGAGTATTAAATGGTGCACAACTTTTCTCTCTCAATAAGGATGAACTGAGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR-3UTR CCA 90 bp AAAGTGAACCAAATCTGCAGCACTAGGATTCTGAATATGAGACTTCAGTTTGGCTTCCTGTTTATACCCTaGGATGGGGATAAAATAATT +
Preference number: 2 (lower is better)
Translates to: KVNQICSTRILNMRLQFGFLFIP*DGDKII
Trigger: AATTATTTTATCCCCATCCCAGGGTATAAACAGGAA...GCCAAACTGAAGTCTCATATTCAGAATCCTAGTGCTGCAGATTTGGTTCACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR CAA 90 bp TCAAGTATCTCTAAAATATCATCCTTTAGAACCGAGAGCTCACTGTaGTTCCTTGCTACAAAGTCATACTTGGATTTGGCATATTTCTTG +
Preference number: 2 (lower is better)
Translates to: SSISKISSFRTESSL*FLATKSYLDLAYFL
Trigger: CAAGAAATATGCCAAATCCAAGTATGACTTTGTAGCAAGGAACAACAGTGAGCTCTCGGTTCTAAAGGATGATATTTTAGAGATACTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR TCA 72 bp ACTGGCACGTTCTGCCGTGGCACATGGAATTTCTTCTaGGCGGCACTCCGACCAATGGTCAGTCTGTGGATG +
Preference number: 3 (lower is better)
Translates to: TGTFCRGTWNFF*AALRPMVSLWM
Trigger: CATCCACAGACTGACCATTGGTCGGAGTGCCGCTCAGAAGAAATTCCATGTGCCACGGCAGAACGTGCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR CCA 72 bp GATTTCCTTCGGTCCACCGGAAGTTGTTTGTGTCTCTaGCTGTCTCGCACGATACTGCCACCACTGTCACTG +
Preference number: 3 (lower is better)
Translates to: DFLRSTGSCLCL*LSRTILPPLSL
Trigger: CAGTGACAGTGGTGGCAGTATCGTGCGAGACAGCCAGAGACACAAACAACTTCCGGTGGACCGAAGGAAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR GCA 72 bp GAAGTTGTTTGTGTCTCTGGCTGTCTCGCACGATACTaGCACCACTGTCACTGGAGCTGCTGTTTTGACGTG +
Preference number: 3 (lower is better)
Translates to: EVVCVSGCLARY*HHCHWSCCFDV
Trigger: CACGTCAAAACAGCAGCTCCAGTGACAGTGGTGGCAGTATCGTGCGAGACAGCCAGAGACACAAACAACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR-3UTR CAA 90 bp TGGCTTTCATCCAAGTTCCTCCCAATGACATCCACAGCTGCCGTTCATCACCATCAGGAGGTGGAGGTTTaGCCCGCAGCGTTAAAACAC +
Preference number: 3 (lower is better)
Translates to: WLSSKFLPMTSTAAVHHHQEVEV*PAALKH
Trigger: GTGTTTTAACGCTGCGGGCAAAACCTCCACCTCCTG...ATGGTGATGAACGGCAGCTGTGGATGTCATTGGGAGGAACTTGGATGAAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR CCA 72 bp TCTGGCTGTCTCGCACGATACTGCCACCACTGTCACTaGAGCTGCTGTTTTGACGTGTTATATTTGCTGGGA +
Preference number: 3 (lower is better)
Translates to: SGCLARYCHHCH*SCCFDVLYLLG
Trigger: TCCCAGCAAATATAACACGTCAAAACAGCAGCTCCAGTGACAGTGGTGGCAGTATCGTGCGAGACAGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR CCA 72 bp GTCGTAAGTGATATTGATAACTGGCACGTTCTGCCGTaGCACATGGAATTTCTTCTGAGCGGCACTCCGACC +
Preference number: 3 (lower is better)
Translates to: VVSDIDNWHVLP*HMEFLLSGTPT
Trigger: GGTCGGAGTGCCGCTCAGAAGAAATTCCATGTGCCACGGCAGAACGTGCCAGTTATCAATATCACTTACGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR CCA 72 bp ATCTTGTTCCATTGTGGCTCCCATAAAGTTCAGCATTaGGGGCTCCCAGCCATTGCGGAATCGTGGAACATA +
Preference number: 3 (lower is better)
Translates to: ILFHCGSHKVQH*GLPAIAESWNI
Trigger: TATGTTCCACGATTCCGCAATGGCTGGGAGCCCCCAATGCTGAACTTTATGGGAGCCACAATGGAACAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR TCA 72 bp CGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCATaGTACTGCCTTGGTTTCTCAACTTTTACCCTTCTC +
Preference number: 3 (lower is better)
Translates to: RAAIISGVSSCS*YCLGFSTFTLL
Trigger: GAGAAGGGTAAAAGTTGAGAAACCAAGGCAGTATCATGAGCAGGAAGAAACACCTGAGATGATGGCAGCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546261.1
3UTR-3UTR CAA 90 bp GGTCTCACAATATCCAAAATGTTATTTGGCACAAATCCAGAGTCTCCACTTGCAAACAGCAGCTTCCCCTaGGTCCAGGTGGGATCCTCT +
Preference number: 3 (lower is better)
Translates to: GLTISKMLFGTNPESPLANSSFP*VQVGSS
Trigger: AGAGGATCCCACCTGGACCAAGGGGAAGCTGCTGTT...TGCAAGTGGAGACTCTGGATTTGTGCCAAATAACATTTTGGATATTGTGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR TCA 72 bp AAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTGAATaGCAGACACCATATTCACAGGCAAAATCGAAACTG +
Preference number: 3 (lower is better)
Translates to: KQRLAYSELCPE*QTPYSQAKSKL
Trigger: CAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGGCTAGCCTCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
3UTR TCA 72 bp AGTCTGTGGATGAGTTCATCTTGCACTTCCTCCATCTaGGATTTCCTTCGGTCCACCGGAAGTTGTTTGTGT +
Preference number: 3 (lower is better)
Translates to: SLWMSSSCTSSI*DFLRSTGSCLC
Trigger: ACACAAACAACTTCCGGTGGACCGAAGGAAATCTCAGATGGAGGAAGTGCAAGATGAACTCATCCACAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR CCA 72 bp ATCCTCTGGTGTGGAGTCGTAAGTGATATTGATAACTaGCACGTTCTGCCGTGGCACATGGAATTTCTTCTG +
Preference number: 3 (lower is better)
Translates to: ILWCGVVSDIDN*HVLPWHMEFLL
Trigger: CAGAAGAAATTCCATGTGCCACGGCAGAACGTGCCAGTTATCAATATCACTTACGACTCCACACCAGAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTGAATCATGGACAACATaGTTGCTTTGTTGCAGTGAA +
Preference number: 3 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPESWTT*LLCCSE
Trigger: TTCACTGCAACAAAGCAACAATGTTGTCCATGATTC...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
3UTR TCA 72 bp CCCCTTCAGGGCAGACTGTCCTCAGTTCATCCTTATTaGGAGAGAAAAGTTGTGCACCATTTAATACTCCAA +
Preference number: 3 (lower is better)
Translates to: PLQGRLSSVHPY*ERKVVHHLILQ
Trigger: TTGGAGTATTAAATGGTGCACAACTTTTCTCTCTCAATAAGGATGAACTGAGGACAGTCTGCCCTGAAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR GCA 72 bp TTTGCGCTGATGTTCTGCTACATTTGCCACAGATTCTaGCAGTTGATAAAGATCTTGTTCCATTGTGGCTCC +
Preference number: 3 (lower is better)
Translates to: FALMFCYICHRF*QLIKILFHCGS
Trigger: GGAGCCACAATGGAACAAGATCTTTATCAACTGGCAGAATCTGTGGCAAATGTAGCAGAACATCAGCGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR CCA 72 bp AGTATAAGGTGGATCAGCACGCCCCAATCCAGATTCTaGAGGTCTCACAATATCCAAAATGTTATTTGGCAC +
Preference number: 3 (lower is better)
Translates to: SIRWISTPQSRF*RSHNIQNVIWH
Trigger: GTGCCAAATAACATTTTGGATATTGTGAGACCTCCAGAATCTGGATTGGGGCGTGCTGATCCACCTTATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCGAATCATGGACAACATaGTTGCTTTGTTGCAGTGAA +
Preference number: 3 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCESWTT*LLCCSE
Trigger: TTCACTGCAACAAAGCAACAATGTTGTCCATGATTC...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
3UTR-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAGAATCATGGACAACATaGTTGCTTTGTTGCAGTGAA +
Preference number: 3 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRESWTT*LLCCSE
Trigger: TTCACTGCAACAAAGCAACAATGTTGTCCATGATTC...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
3UTR-3UTR CAA 90 bp CCGAGAGCTCACTGTTGTTCCTTGCTACAAAGTCATACTTGGATTTGGCATATTCAGTTGATAAAGATCTaGTTCCATTGTGGCTCCCAT +
Preference number: 3 (lower is better)
Translates to: PRAHCCSLLQSHTWIWHIQLIKI*FHCGSH
Trigger: ATGGGAGCCACAATGGAACAAGATCTTTATCAACTG...AATATGCCAAATCCAAGTATGACTTTGTAGCAAGGAACAACAGTGAGCTCTCGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR TCA 72 bp TGCACACCAATGCAGACTACTTCCTTTGCTAGATTTTaGGAAGACATGACCTCTTTCGCATTTGTGCTTTCT +
Preference number: 3 (lower is better)
Translates to: CTPMQTTSFARF*EDMTSFAFVLS
Trigger: AGAAAGCACAAATGCGAAAGAGGTCATGTCTTCTCAAAATCTAGCAAAGGAAGTAGTCTGCATTGGTGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
3UTR GCA 72 bp CCAGAGTCTCCACTTGCATTTCGAACTTTCCACCATTaGTTCCGATCATCAAGTATCTCTAAAATATCATCC +
Preference number: 3 (lower is better)
Translates to: PESPLAFRTFHH*FRSSSISKISS
Trigger: GGATGATATTTTAGAGATACTTGATGATCGGAAGCAATGGTGGAAAGTTCGAAATGCAAGTGGAGACTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR GCA 72 bp CAAAATGTTATTTGGCACAAATCCAGAGTCTCCACTTaGATTTCGAACTTTCCACCATTGCTTCCGATCATC +
Preference number: 3 (lower is better)
Translates to: QNVIWHKSRVST*ISNFPPLLPII
Trigger: GATGATCGGAAGCAATGGTGGAAAGTTCGAAATGCAAGTGGAGACTCTGGATTTGTGCCAAATAACATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR CCA 72 bp TGGTTCATAATTTCTATCTATATGGCGATTAGAAGTTaGCTTAAAAGCAACAGCAGCTTCCCCTTGGTCCAG +
Preference number: 3 (lower is better)
Translates to: WFIISIYMAIRS*LKSNSSFPLVQ
Trigger: CTGGACCAAGGGGAAGCTGCTGTTGCTTTTAAGCCAACTTCTAATCGCCATATAGATAGAAATTATGAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR-3UTR CAA 90 bp CCGAGAGCTCACTGTTGTTCCTTGCTACAAAGTCATACTTGGATTTGGCATATTCACAGATTCTGCCAGTaGATAAAGATCTTGTTCCAT +
Preference number: 3 (lower is better)
Translates to: PRAHCCSLLQSHTWIWHIHRFCQ*IKILFH
Trigger: ATGGAACAAGATCTTTATCAACTGGCAGAATCTGTG...AATATGCCAAATCCAAGTATGACTTTGTAGCAAGGAACAACAGTGAGCTCTCGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR-3UTR CAA 90 bp GTCCTCAGTTCATCCTTATTGAGAGAGAAAAGTTGTGCACCATTTAATACTCCAGCTCACTGTTGTTCCTaGCTACAAAGTCATACTTGG +
Preference number: 3 (lower is better)
Translates to: VLSSSLLREKSCAPFNTPAHCCS*LQSHTW
Trigger: CCAAGTATGACTTTGTAGCAAGGAACAACAGTGAGC...TGGAGTATTAAATGGTGCACAACTTTTCTCTCTCAATAAGGATGAACTGAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR-3UTR CAA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCAGAATCATGGACAACATaGTTGCTTTGTTGCAGTGAA +
Preference number: 3 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKAESWTT*LLCCSE
Trigger: TTCACTGCAACAAAGCAACAATGTTGTCCATGATTC...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
3UTR-3UTR CAA 90 bp TTGATTCTAAATCAATCAGGCTCACAGCTCTGTCATCCACTTGAAGAATCATATGTCCACACTTTGCCCTaGGCATCAAGCAATTTCAAT +
Preference number: 3 (lower is better)
Translates to: LILNQSGSQLCHPLEESYVHTLP*ASSNFN
Trigger: ATTGAAATTGCTTGATGCCAAGGGCAAAGTGTGGAC...ATATGATTCTTCAAGTGGATGACAGAGCTGTGAGCCTGATTGATTTAGAATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536956.5
3UTR TCA 72 bp TACAAGCTATACAAGGAGTTGCAATCAACAGAGCCATaGCAAACTCTCTTGAGAATGCTCCATAGATTTATA +
Preference number: 3 (lower is better)
Translates to: YKLYKELQSTEP*QTLLRMLHRFI
Trigger: TATAAATCTATGGAGCATTCTCAAGAGAGTTTGTCATGGCTCTGTTGATTGCAACTCCTTGTATAGCTTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
3UTR-3UTR CAA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGTCCATAGATTTATATTaGCATGTCCAAGGTATGGCT +
Preference number: 3 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVSIDLY*HVQGMA
Trigger: AGCCATACCTTGGACATGCAAATATAAATCTATGGA...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
3UTR CCA 72 bp CTTGGATTTGGCATATTTCTTGGGTTGTGTTTTGAGTaGTTCATAATTTCTATCTATATGGCGATTAGAAGT +
Preference number: 3 (lower is better)
Translates to: LGFGIFLGLCFE*FIISIYMAIRS
Trigger: ACTTCTAATCGCCATATAGATAGAAATTATGAACCACTCAAAACACAACCCAAGAAATATGCCAAATCCAAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR GCA 90 bp TTTGCACATCTCTGTCAATGCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTTTGGTCGGCTGCCCATaGAGACCAGGCTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: FAHLCQCGLPSSQVFLPALVGCP*RPGCHS
Trigger: CGAGTGGCAGCCTGGTCTGCATGGGCAGCCGACCAA...AGCAGGAAGAAACACCTGAGATGATGGCAGCCCGCATTGACAGAGATGTGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546261.1
CDS-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTCGCGGAGCCGCCTTCTaGACCCAGCTAAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPRGAAF*TQLKSS
Trigger: GCTGCTCTTTAGCTGGGTGCAGAAGGCGGCTCCGCG...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000647224.1
CDS-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTTGGTCGGCTGCCCATaGAGACCAGGCTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPLVGCP*RPGCHS
Trigger: CGAGTGGCAGCCTGGTCTGCATGGGCAGCCGACCAA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp CACATCTCTGTCAATGCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCATGCCAAGTTCCTCCCAATaGCATCCACAGCTGCCGTTC +
Preference number: 4 (lower is better)
Translates to: HISVNAGCHHLRCFFLLMPSSSQ*HPQLPF
Trigger: GAACGGCAGCTGTGGATGTCATTGGGAGGAACTTGG...CATGAGCAGGAAGAAACACCTGAGATGATGGCAGCCCGCATTGACAGAGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR TCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAACCAGGAAGGCGTTCTaGCCCGCTAGAGCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRTRKAF*PARARG
Trigger: TCCCCGAGCTCTAGCGGGTCAGAACGCCTTCCTGGT...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646918.1
CDS-3UTR GCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCCGCGGAGCCGCCTTCTaGACCCAGCTAAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCRGAAF*TQLKSS
Trigger: GCTGCTCTTTAGCTGGGTGCAGAAGGCGGCTCCGCG...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000647224.1
CDS-3UTR GCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATTGGTCGGCTGCCCATaGAGACCAGGCTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRLVGCP*RPGCHS
Trigger: CGAGTGGCAGCCTGGTCTGCATGGGCAGCCGACCAA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTTGGTCGGCTGCCCATaGAGACCAGGCTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCLVGCP*RPGCHS
Trigger: CGAGTGGCAGCCTGGTCTGCATGGGCAGCCGACCAA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTGGCAGGAGCTCTGGGTaGAGGCGGTATACTAGGGTC +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPGRSSG*RRYTRV
Trigger: GACCCTAGTATACCGCCTCCACCCAGAGCTCCTGCC...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp AATTCATCAGGAGGTGGAGGTTTTGCCCGCAGCGTTAAAACACCCTCTCCTGGTACAGCAGCTTCCCCTTaGTCCAGGTGGGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: NSSGGGGFARSVKTPSPGTAASP*SRWDPL
Trigger: AAGAGGATCCCACCTGGACCAAGGGGAAGCTGCTGT...ACCAGGAGAGGGTGTTTTAACGCTGCGGGCAAAACCTCCACCTCCTGATGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTCACAGGAACAGGTGCTaGAGTGGAAGGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPHRNRC*SGRGKG
Trigger: CCCCTTCCCCCTTCCACTCCAGCACCTGTTCCTGTG...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTGGTTTGGGCCGTCACTaGGTATGGCTCGTGTCCGTC +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPGLGRH*VWLVSV
Trigger: GACGGACACGAGCCATACCCAGTGACGGCCCAAACC...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646918.1
3UTR CAA 72 bp TTCCTCCATCTGAGATTTCCTTCGGTCCACCGGAAGTaGTTTGTGTCTCTGGCTGTCTCGCACGATACTGCC +
Preference number: 4 (lower is better)
Translates to: FLHLRFPSVHRK*FVSLAVSHDTA
Trigger: GGCAGTATCGTGCGAGACAGCCAGAGACACAAACAACTTCCGGTGGACCGAAGGAAATCTCAGATGGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR GCA 90 bp CATCCACTTGAAGAATCATATCTTGAGTCCACACTTTGCCCTTGGCATCAAGCACGCGGAGCCGCCTTCTaGACCCAGCTAAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: HPLEESYLESTLCPWHQARGAAF*TQLKSS
Trigger: GCTGCTCTTTAGCTGGGTGCAGAAGGCGGCTCCGCG...TGCTTGATGCCAAGGGCAAAGTGTGGACTCAAGATATGATTCTTCAAGTGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536956.5
CDS-3UTR GCA 90 bp TTGCACATCTCTGTCAATGCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCCCATGCAGACCAGGCTaGCACTCGACTTCTAACATC +
Preference number: 4 (lower is better)
Translates to: LHISVNAGCHHLRCFFLLPCRPG*HSTSNI
Trigger: GATGTTAGAAGTCGAGTGGCAGCCTGGTCTGCATGG...GAGCAGGAAGAAACACCTGAGATGATGGCAGCCCGCATTGACAGAGATGTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546261.1
CDS-3UTR CCA 90 bp GTGATGGAGCAGGGGGAGTATCAGCTGGTCTTGGGCCATACTCCATCCTTTGTTAGATCTGGCTTGTTCTaGGTTGGCTCTTTGCACACC +
Preference number: 4 (lower is better)
Translates to: VMEQGEYQLVLGHTPSFVRSGLF*VGSLHT
Trigger: GGTGTGCAAAGAGCCAACCCAGAACAAGCCAGATCT...AACAAAGGATGGAGTATGGCCCAAGACCAGCTGATACTCCCCCTGCTCCATCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCGGCAGGAGCTCTGGGTaGAGGCGGTATACTAGGGTC +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCGRSSG*RRYTRV
Trigger: GACCCTAGTATACCGCCTCCACCCAGAGCTCCTGCC...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAGGCAGGAGCTCTGGGTaGAGGCGGTATACTAGGGTC +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRGRSSG*RRYTRV
Trigger: GACCCTAGTATACCGCCTCCACCCAGAGCTCCTGCC...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCCTTCTAACATCCACCTaGGTGACGGTCCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCLLTST*VTVPGG
Trigger: GCCCCCTGGGACCGTCACCCAGGTGGATGTTAGAAG...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACTTCTAACATCCACCTaGGTGACGGTCCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRLLTST*VTVPGG
Trigger: GCCCCCTGGGACCGTCACCCAGGTGGATGTTAGAAG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GATAACTGGCACGTTCTGCCGTGGCACATGGAATTTCTTCTGAGCGGCACTCCGAGTATCAGCTGGTCTTaGGCCATACTCCATCCTTTG +
Preference number: 4 (lower is better)
Translates to: DNWHVLPWHMEFLLSGTPSISWS*AILHPL
Trigger: CAAAGGATGGAGTATGGCCCAAGACCAGCTGATACT...CGGAGTGCCGCTCAGAAGAAATTCCATGTGCCACGGCAGAACGTGCCAGTTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCCACAGGAACAGGTGCTaGAGTGGAAGGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCHRNRC*SGRGKG
Trigger: CCCCTTCCCCCTTCCACTCCAGCACCTGTTCCTGTG...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACACAGGAACAGGTGCTaGAGTGGAAGGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRHRNRC*SGRGKG
Trigger: CCCCTTCCCCCTTCCACTCCAGCACCTGTTCCTGTG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GATAACTGGCACGTTCTGCCGTGGCACATGGAATTTCTTCTGAGCGGCACTCCGCTCATGATACTGCCTTaGTTTCTCAACTCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: DNWHVLPWHMEFLLSGTPLMILP*FLNSGR
Trigger: ACGCCCTGAGTTGAGAAACCAAGGCAGTATCATGAG...CGGAGTGCCGCTCAGAAGAAATTCCATGTGCCACGGCAGAACGTGCCAGTTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCCAGCGTTCGCTGGTTTaGGCCGTCACTGGGTATGGC +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCQRSLV*AVTGYG
Trigger: GCCATACCCAGTGACGGCCCAAACCAGCGAACGCTG...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646918.1
CDS-3UTR TCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTCCAAGTTCCTCCCAATaGCATCCACAGCTGCCGTTC +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPPSSSQ*HPQLPF
Trigger: GAACGGCAGCTGTGGATGTCATTGGGAGGAACTTGG...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp CATCTGAGATTTCCTTCGGTCCACCGGAAGTTGTTTGTGTCTCTGGCTGTCTCGACATGGAATTTCTTCTaGGCGGCACTCCGACCAATG +
Preference number: 4 (lower is better)
Translates to: HLRFPSVHRKLFVSLAVSTWNFF*AALRPM
Trigger: CATTGGTCGGAGTGCCGCTCAGAAGAAATTCCATGT...CGAGACAGCCAGAGACACAAACAACTTCCGGTGGACCGAAGGAAATCTCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR TCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACGGCAGGTACACAGCTaGCGCTGGTCCTTGGACTTA +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRRQVHS*RWSLDL
Trigger: TAAGTCCAAGGACCAGCGTCAGCTGTGTACCTGCCG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646918.1
CDS-3UTR GCA 90 bp TGCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCATGATACTGCCTTGGTTTCTGGGTTGGCTCTTTaGACACCAGTGCAAGAACTG +
Preference number: 4 (lower is better)
Translates to: CGLPSSQVFLPAHDTALVSGLAL*TPVQEL
Trigger: CAGTTCTTGCACTGGTGTGCAAAGAGCCAACCCAGA...AACCAAGGCAGTATCATGAGCAGGAAGAAACACCTGAGATGATGGCAGCCCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR GCA 90 bp CCTTCTCCACTGCCAGCAGCCAACCACTGTCCTGACAACCTTTCCATGAATATGTCTGTCAATGCGGGCTaGCATCATCTCAGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: PSPLPAANHCPDNLSMNMSVNAG*HHLRCF
Trigger: GAAACACCTGAGATGATGGCAGCCCGCATTGACAGA...CATATTCATGGAAAGGTTGTCAGGACAGTGGTTGGCTGCTGGCAGTGGAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546261.1
CDS-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTGGGGCTCCCAGCCATTaGGGAATCGTGGAACATATG +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPGAPSH*GIVEHM
Trigger: CATATGTTCCACGATTCCGCAATGGCTGGGAGCCCC...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTGTCTCGCACGATACTaGCACCACTGTCACTGGAGC +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPCLARY*HHCHWS
Trigger: GCTCCAGTGACAGTGGTGGCAGTATCGTGCGAGACA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTTCTCAAAGTCCCCTTaGTCGGCTGCCCATGCAGAC +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPFSKSP*SAAHAD
Trigger: GTCTGCATGGGCAGCCGACCAAGGGGACTTTGAGAA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp CACATCTCTGTCAATGCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCATGAAATTCATCAGGAGGTaGAGGTTTTGCCCGCAGCGT +
Preference number: 4 (lower is better)
Translates to: HISVNAGCHHLRCFFLLMKFIRR*RFCPQR
Trigger: ACGCTGCGGGCAAAACCTCCACCTCCTGATGAATTT...CATGAGCAGGAAGAAACACCTGAGATGATGGCAGCCCGCATTGACAGAGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543468.5
ENST00000546261.1
CDS-3UTR CCA 90 bp GTTGTTTGTGTCTCTGGCTGTCTCGCACGATACTGCCACCACTGTCACTGGAGCCCAATGGTCAGTCTGTaGATGAGTTCATCTTGCACT +
Preference number: 4 (lower is better)
Translates to: VVCVSGCLARYCHHCHWSPMVSL*MSSSCT
Trigger: AGTGCAAGATGAACTCATCCACAGACTGACCATTGG...GCTCCAGTGACAGTGGTGGCAGTATCGTGCGAGACAGCCAGAGACACAAACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CCA 90 bp CATCTGAGATTTCCTTCGGTCCACCGGAAGTTGTTTGTGTCTCTGGCTGTCTCGTGGCACGTTCTGCCGTaGCACATGGAATTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: HLRFPSVHRKLFVSLAVSWHVLP*HMEFLL
Trigger: CAGAAGAAATTCCATGTGCCACGGCAGAACGTGCCA...CGAGACAGCCAGAGACACAAACAACTTCCGGTGGACCGAAGGAAATCTCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR CAA 72 bp CTCGGAGCTGCCACTGCTATCCTCCAATGCAGCTTTTaGTACAGTGATTTGGCTATAGACTCTCGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: LGAATAILQCSF*YSDLAIDSRPF
Trigger: GAAGGGGCGAGAGTCTATAGCCAAATCACTGTACAAAAAGCTGCATTGGAGGATAGCAGTGGCAGCTCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR TCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCCCAAGTTCCTCCCAATaGCATCCACAGCTGCCGTTC +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCPSSSQ*HPQLPF
Trigger: GAACGGCAGCTGTGGATGTCATTGGGAGGAACTTGG...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACCAAGTTCCTCCCAATaGCATCCACAGCTGCCGTTC +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRPSSSQ*HPQLPF
Trigger: GAACGGCAGCTGTGGATGTCATTGGGAGGAACTTGG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTATTTGCTGGGACCTTTaGCACAGGAACAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPICWDL*HRNRCW
Trigger: CCAGCACCTGTTCCTGTGTCAAAGGTCCCAGCAAAT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCATGATACTGCCTTGGTTTCTGGAGCTGCTGTTTTaGCGTGTTATATTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: AGCHHLRCFFLLMILPWFLELLF*RVIFAG
Trigger: CCCAGCAAATATAACACGTCAAAACAGCAGCTCCAG...AAACCAAGGCAGTATCATGAGCAGGAAGAAACACCTGAGATGATGGCAGCCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR TCA 90 bp TTGCACATCTCTGTCAATGCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCGAGCTATGCCCTGAATaGCAGACACCATATTCACAG +
Preference number: 4 (lower is better)
Translates to: LHISVNAGCHHLRCFFLLELCPE*QTPYSQ
Trigger: CTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTC...GAGCAGGAAGAAACACCTGAGATGATGGCAGCCCGCATTGACAGAGATGTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTCCATGCAGACCAGGCTaGCACTCGACTTCTAACATC +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPPCRPG*HSTSNI
Trigger: GATGTTAGAAGTCGAGTGGCAGCCTGGTCTGCATGG...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp TGGCTTTCATCCAAGTTCCTCCCAATGACATCCACAGCTGCCGTTCATCACCATTCTGTCAATGCGGGCTaGCATCATCTCAGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: WLSSKFLPMTSTAAVHHHSVNAG*HHLRCF
Trigger: GAAACACCTGAGATGATGGCAGCCCGCATTGACAGA...ATGGTGATGAACGGCAGCTGTGGATGTCATTGGGAGGAACTTGGATGAAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTGCACATCTCTGTCAATaGGGGCTGCCATCATCTCAG +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPAHLCQ*GLPSSQ
Trigger: CTGAGATGATGGCAGCCCGCATTGACAGAGATGTGC...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAGGGGCTCCCAGCCATTaGGGAATCGTGGAACATATG +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRGAPSH*GIVEHM
Trigger: CATATGTTCCACGATTCCGCAATGGCTGGGAGCCCC...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCGGGGCTCCCAGCCATTaGGGAATCGTGGAACATATG +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCGAPSH*GIVEHM
Trigger: CATATGTTCCACGATTCCGCAATGGCTGGGAGCCCC...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTGTCTCGCACGATACTaGCACCACTGTCACTGGAGC +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCCLARY*HHCHWS
Trigger: GCTCCAGTGACAGTGGTGGCAGTATCGTGCGAGACA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATGTCTCGCACGATACTaGCACCACTGTCACTGGAGC +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRCLARY*HHCHWS
Trigger: GCTCCAGTGACAGTGGTGGCAGTATCGTGCGAGACA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTACTCGGAGCTGCCACTaGTATCCTCCAATGCAGCTT +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPTRSCH*YPPMQL
Trigger: AAGCTGCATTGGAGGATAGCAGTGGCAGCTCCGAGT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp ATCTTGTTCCATTGTGGCTCCCATAAAGTTCAGCATTGGGGGCTCCCAGCCATTCTTGTAACTCGGAGCTaGCACTGCTATCCTCCAATG +
Preference number: 4 (lower is better)
Translates to: ILFHCGSHKVQHWGLPAILVTRS*HCYPPM
Trigger: CATTGGAGGATAGCAGTGGCAGCTCCGAGTTACAAG...AATGGCTGGGAGCCCCCAATGCTGAACTTTATGGGAGCCACAATGGAACAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR GCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTTGCCCAGGCTGGAGTaGGGTGGCGCGAGCACCGCT +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTLPRLE*GGASTA
Trigger: AGCGGTGCTCGCGCCACCGCACTCCAGCCTGGGCAA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646918.1
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTGGCTTGTTCTGGGTTaGCTCTTTGCACACCAGTGC +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPWLVLG*LFAHQC
Trigger: GCACTGGTGTGCAAAGAGCCAACCCAGAACAAGCCA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATTCTCAAAGTCCCCTTaGTCGGCTGCCCATGCAGAC +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRFSKSP*SAAHAD
Trigger: GTCTGCATGGGCAGCCGACCAAGGGGACTTTGAGAA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTTCTCAAAGTCCCCTTaGTCGGCTGCCCATGCAGAC +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCFSKSP*SAAHAD
Trigger: GTCTGCATGGGCAGCCGACCAAGGGGACTTTGAGAA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTCATAAAGTTCAGCATTaGGGGCTCCCAGCCATTGCG +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPHKVQH*GLPAIA
Trigger: CGCAATGGCTGGGAGCCCCCAATGCTGAACTTTATG...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCACAGCAGCTTCCCCTTaGTCCAGGTGGGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCTAASP*SRWDPL
Trigger: AAGAGGATCCCACCTGGACCAAGGGGAAGCTGCTGT...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAACAGCAGCTTCCCCTTaGTCCAGGTGGGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRTAASP*SRWDPL
Trigger: AAGAGGATCCCACCTGGACCAAGGGGAAGCTGCTGT...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp CCGAGAGCTCACTGTTGTTCCTTGCTACAAAGTCATACTTGGATTTGGCATATTCACAGGAACAGGTGCTaGAGTGGAAGGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: PRAHCCSLLQSHTWIWHIHRNRC*SGRGKG
Trigger: CCCCTTCCCCCTTCCACTCCAGCACCTGTTCCTGTG...AATATGCCAAATCCAAGTATGACTTTGTAGCAAGGAACAACAGTGAGCTCTCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR CAA 72 bp GCTCCCATAAAGTTCAGCATTGGGGGCTCCCAGCCATaGCGGAATCGTGGAACATATGGTGGAATAAACTGT +
Preference number: 4 (lower is better)
Translates to: APIKFSIGGSQP*RNRGTYGGINC
Trigger: ACAGTTTATTCCACCATATGTTCCACGATTCCGCAATGGCTGGGAGCCCCCAATGCTGAACTTTATGGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR CAA 72 bp AGCTGCTGTTTTGACGTGTTATATTTGCTGGGACCTTaGACACAGGAACAGGTGCTGGAGTGGAAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: SCCFDVLYLLGP*TQEQVLEWKGE
Trigger: TTCCCCCTTCCACTCCAGCACCTGTTCCTGTGTCAAAGGTCCCAGCAAATATAACACGTCAAAACAGCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR CAA 72 bp CACTGTCACTGGAGCTGCTGTTTTGACGTGTTATATTaGCTGGGACCTTTGACACAGGAACAGGTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: HCHWSCCFDVLY*LGPLTQEQVLE
Trigger: CTCCAGCACCTGTTCCTGTGTCAAAGGTCCCAGCAAATATAACACGTCAAAACAGCAGCTCCAGTGACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR CAA 72 bp ACTCCGACCAATGGTCAGTCTGTGGATGAGTTCATCTaGCACTTCCTCCATCTGAGATTTCCTTCGGTCCAC +
Preference number: 4 (lower is better)
Translates to: TPTNGQSVDEFI*HFLHLRFPSVH
Trigger: GTGGACCGAAGGAAATCTCAGATGGAGGAAGTGCAAGATGAACTCATCCACAGACTGACCATTGGTCGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR TCA 90 bp ATAGACTCTCGCCCCTTCAGGGCAGACTGTCCTCAGTTCATCCTTATTGAGAGAGGCTGGATGATACTCTaGTACACTGGAATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: IDSRPFRADCPQFILIERGWMIL*YTGMLC
Trigger: ACAGAGCATTCCAGTGTATCAGAGTATCATCCAGCC...TCTCTCAATAAGGATGAACTGAGGACAGTCTGCCCTGAAGGGGCGAGAGTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR TCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAATTTGCTGGGACCTTTaGCACAGGAACAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRICWDL*HRNRCW
Trigger: CCAGCACCTGTTCCTGTGTCAAAGGTCCCAGCAAAT...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTACATGGAATTTCTTCTaGGCGGCACTCCGACCAATG +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPTWNFF*AALRPM
Trigger: CATTGGTCGGAGTGCCGCTCAGAAGAAATTCCATGT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp TTGCACATCTCTGTCAATGCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCAGCCAACCACTGTCCTaGCAACCTTTCCATGAATAT +
Preference number: 4 (lower is better)
Translates to: LHISVNAGCHHLRCFFLLSQPLS*QPFHEY
Trigger: ATATTCATGGAAAGGTTGTCAGGACAGTGGTTGGCT...GAGCAGGAAGAAACACCTGAGATGATGGCAGCCCGCATTGACAGAGATGTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546261.1
CDS-3UTR GCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACCATGCAGACCAGGCTaGCACTCGACTTCTAACATC +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRPCRPG*HSTSNI
Trigger: GATGTTAGAAGTCGAGTGGCAGCCTGGTCTGCATGG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTTGGTCGGCTGCCCATaGAGACCAGGCTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCLVGCP*RPGCHS
Trigger: CGAGTGGCAGCCTGGTCTGCATGGGCAGCCGACCAA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTCTGTCAATGCGGGCTaGCATCATCTCAGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPSVNAG*HHLRCF
Trigger: GAAACACCTGAGATGATGGCAGCCCGCATTGACAGA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCGCACATCTCTGTCAATaGGGGCTGCCATCATCTCAG +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCAHLCQ*GLPSSQ
Trigger: CTGAGATGATGGCAGCCCGCATTGACAGAGATGTGC...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAGCACATCTCTGTCAATaGGGGCTGCCATCATCTCAG +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRAHLCQ*GLPSSQ
Trigger: CTGAGATGATGGCAGCCCGCATTGACAGAGATGTGC...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GATAACTGGCACGTTCTGCCGTGGCACATGGAATTTCTTCTGAGCGGCACTCCGAGAAAGCTCAGAAAATaGTTCTGCTGCTTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: DNWHVLPWHMEFLLSGTPRKLRK*FCCFLE
Trigger: CTCCAAAAAGCAGCAGAAGCATTTTCTGAGCTTTCT...CGGAGTGCCGCTCAGAAGAAATTCCATGTGCCACGGCAGAACGTGCCAGTTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR GCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAACTCGGAGCTGCCACTaGTATCCTCCAATGCAGCTT +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRTRSCH*YPPMQL
Trigger: AAGCTGCATTGGAGGATAGCAGTGGCAGCTCCGAGT...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTCTTGTAACTCGGAGCTaGCACTGCTATCCTCCAATG +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPLVTRS*HCYPPM
Trigger: CATTGGAGGATAGCAGTGGCAGCTCCGAGTTACAAG...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GATAACTGGCACGTTCTGCCGTGGCACATGGAATTTCTTCTGAGCGGCACTCCGTGTAATGCACACCAATaGAGACTACTTCCTTTGCTA +
Preference number: 4 (lower is better)
Translates to: DNWHVLPWHMEFLLSGTPCNAHQ*RLLPLL
Trigger: TAGCAAAGGAAGTAGTCTGCATTGGTGTGCATTACA...CGGAGTGCCGCTCAGAAGAAATTCCATGTGCCACGGCAGAACGTGCCAGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTGGCTTGTTCTGGGTTaGCTCTTTGCACACCAGTGC +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCWLVLG*LFAHQC
Trigger: GCACTGGTGTGCAAAGAGCCAACCCAGAACAAGCCA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTAGATCTGGCTTGTTCTaGGTTGGCTCTTTGCACACC +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPRSGLF*VGSLHT
Trigger: GGTGTGCAAAGAGCCAACCCAGAACAAGCCAGATCT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCAGGCAGGAGCTCTGGGTaGAGGCGGTATACTAGGGTC +
Preference number: 4 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKAGRSSG*RRYTRV
Trigger: GACCCTAGTATACCGCCTCCACCCAGAGCTCCTGCC...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CCA 90 bp AAAGTGAACCAAATCTGCAGCACTAGGATTCTGAATATGAGACTTCAGTTTGGCGGCAGGAGCTCTGGGTaGAGGCGGTATACTAGGGTC +
Preference number: 4 (lower is better)
Translates to: KVNQICSTRILNMRLQFGGRSSG*RRYTRV
Trigger: GACCCTAGTATACCGCCTCCACCCAGAGCTCCTGCC...GCCAAACTGAAGTCTCATATTCAGAATCCTAGTGCTGCAGATTTGGTTCACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546261.1
CDS-3UTR CCA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCACTTCTAACATCCACCTaGGTGACGGTCCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKALLTST*VTVPGG
Trigger: GCCCCCTGGGACCGTCACCCAGGTGGATGTTAGAAG...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTAAATTCATCAGGAGGTaGAGGTTTTGCCCGCAGCGT +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPKFIRR*RFCPQR
Trigger: ACGCTGCGGGCAAAACCTCCACCTCCTGATGAATTT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTTGGCCACTCTGCTCTaGCTTTCATCCAAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPLATLL*LSSKFL
Trigger: GAGGAACTTGGATGAAAGCCAGAGCAGAGTGGCCAA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACATAAAGTTCAGCATTaGGGGCTCCCAGCCATTGCG +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRHKVQH*GLPAIA
Trigger: CGCAATGGCTGGGAGCCCCCAATGCTGAACTTTATG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCCATAAAGTTCAGCATTaGGGGCTCCCAGCCATTGCG +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCHKVQH*GLPAIA
Trigger: CGCAATGGCTGGGAGCCCCCAATGCTGAACTTTATG...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCACACAGGAACAGGTGCTaGAGTGGAAGGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKAHRNRC*SGRGKG
Trigger: CCCCTTCCCCCTTCCACTCCAGCACCTGTTCCTGTG...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTGGCACGTTCTGCCGTaGCACATGGAATTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPWHVLP*HMEFLL
Trigger: CAGAAGAAATTCCATGTGCCACGGCAGAACGTGCCA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
3UTR CAA 72 bp ACTGCTATCCTCCAATGCAGCTTTTTGTACAGTGATTaGGCTATAGACTCTCGCCCCTTCAGGGCAGACTGT +
Preference number: 4 (lower is better)
Translates to: TAILQCSFLYSD*AIDSRPFRADC
Trigger: ACAGTCTGCCCTGAAGGGGCGAGAGTCTATAGCCAAATCACTGTACAAAAAGCTGCATTGGAGGATAGCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR TCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTATCTGACACACTGCTaGCACTGTCCCGTGCATAAT +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPYLTHC*HCPVHN
Trigger: ATTATGCACGGGACAGTGTCAGCAGTGTGTCAGATA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTCACACTGGAAGAGATaGAGATCTGGCTTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPSHWKR*RSGLFW
Trigger: CCAGAACAAGCCAGATCTTCATCTCTTCCAGTGTGA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTGGCTGGATGATACTCTaGTACACTGGAATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPGWMIL*YTGMLC
Trigger: ACAGAGCATTCCAGTGTATCAGAGTATCATCCAGCC...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTGTAAATGTTGCTACTaGACGCATAGCCATCGGCTG +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPCKCCY*THSHRL
Trigger: CAGCCGATGGCTATGCGTTCAGTAGCAACATTTACA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTCTGGAGCTGCTGTTTTaGCGTGTTATATTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPLELLF*RVIFAG
Trigger: CCCAGCAAATATAACACGTCAAAACAGCAGCTCCAG...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTGGTCAGTCTGTGGATaGGTTCATCTTGCACTTCCT +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPWSVCG*VHLALP
Trigger: AGGAAGTGCAAGATGAACTCATCCACAGACTGACCA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCACATGGAATTTCTTCTaGGCGGCACTCCGACCAATG +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCTWNFF*AALRPM
Trigger: CATTGGTCGGAGTGCCGCTCAGAAGAAATTCCATGT...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAACATGGAATTTCTTCTaGGCGGCACTCCGACCAATG +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRTWNFF*AALRPM
Trigger: CATTGGTCGGAGTGCCGCTCAGAAGAAATTCCATGT...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTAAAAGATTCCACTCCTaGATCACTAGCGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPKRFHS*ITSGST
Trigger: AGTGCTGCCGCTAGTGATTCAGGAGTGGAATCTTTT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATTGGGACCACCAAAGTaGACCAAACAGACATGGTCC +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRLGPPK*TKQTWS
Trigger: GGACCATGTCTGTTTGGTTCACTTTGGTGGTCCCAA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642278.1
CDS-3UTR GCA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGCGCGGAGCCGCCTTCTaGACCCAGCTAAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVRGAAF*TQLKSS
Trigger: GCTGCTCTTTAGCTGGGTGCAGAAGGCGGCTCCGCG...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
CDS-3UTR GCA 90 bp CAGTTTGGCCAGAAGGTTAAATCCGTGTTTAAACTTTTGGAAACAGTCAAGAAACGCGGAGCCGCCTTCTaGACCCAGCTAAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: QFGQKVKSVFKLLETVKKRGAAF*TQLKSS
Trigger: GCTGCTCTTTAGCTGGGTGCAGAAGGCGGCTCCGCG...TTTCTTGACTGTTTCCAAAAGTTTAAACACGGATTTAACCTTCTGGCCAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR GCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATCTGGGTTGGCTCTTTaGACACCAGTGCAAGAACTG +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRSGLAL*TPVQEL
Trigger: CAGTTCTTGCACTGGTGTGCAAAGAGCCAACCCAGA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTCTGGGTTGGCTCTTTaGACACCAGTGCAAGAACTG +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCSGLAL*TPVQEL
Trigger: CAGTTCTTGCACTGGTGTGCAAAGAGCCAACCCAGA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGTTGGTCGGCTGCCCATaGAGACCAGGCTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVLVGCP*RPGCHS
Trigger: CGAGTGGCAGCCTGGTCTGCATGGGCAGCCGACCAA...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281172.10
ENST00000543523.5
CDS-3UTR GCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTTGGTCGGCTGCCCATaGAGACCAGGCTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTLVGCP*RPGCHS
Trigger: CGAGTGGCAGCCTGGTCTGCATGGGCAGCCGACCAA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATCTGTCAATGCGGGCTaGCATCATCTCAGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRSVNAG*HHLRCF
Trigger: GAAACACCTGAGATGATGGCAGCCCGCATTGACAGA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTCTGTCAATGCGGGCTaGCATCATCTCAGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCSVNAG*HHLRCF
Trigger: GAAACACCTGAGATGATGGCAGCCCGCATTGACAGA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp TCAGGAGGTGGAGGTTTTGCCCGCAGCGTTAAAACACCCTCTCCTGGTCCTTTCAAAGTGAACCAAATCTaGAGCACTAGGATTCTGAAT +
Preference number: 4 (lower is better)
Translates to: SGGGGFARSVKTPSPGPFKVNQI*STRILN
Trigger: ATTCAGAATCCTAGTGCTGCAGATTTGGTTCACTTT...GAAAGGACCAGGAGAGGGTGTTTTAACGCTGCGGGCAAAACCTCCACCTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543468.5
ENST00000546261.1
CDS-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTGGACCTCCTGTTGCCTaGACCACCATATTTAATGGA +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPGPPVA*TTIFNG
Trigger: TCCATTAAATATGGTGGTGCAGGCAACAGGAGGTCC...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp CCGAGAGCTCACTGTTGTTCCTTGCTACAAAGTCATACTTGGATTTGGCATATTGGGGCTCCCAGCCATTaGGGAATCGTGGAACATATG +
Preference number: 4 (lower is better)
Translates to: PRAHCCSLLQSHTWIWHIGAPSH*GIVEHM
Trigger: CATATGTTCCACGATTCCGCAATGGCTGGGAGCCCC...AATATGCCAAATCCAAGTATGACTTTGTAGCAAGGAACAACAGTGAGCTCTCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR GCA 90 bp AATTCATCAGGAGGTGGAGGTTTTGCCCGCAGCGTTAAAACACCCTCTCCTGGTCACTGTCACTGGAGCTaGTGTTTTGACGTGTTATAT +
Preference number: 4 (lower is better)
Translates to: NSSGGGGFARSVKTPSPGHCHWS*CFDVLY
Trigger: ATATAACACGTCAAAACAGCAGCTCCAGTGACAGTG...ACCAGGAGAGGGTGTTTTAACGCTGCGGGCAAAACCTCCACCTCCTGATGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTATAACTGGCACGTTCTaGCGTGGCACATGGAATTTC +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPITGTF*RGTWNF
Trigger: GAAATTCCATGTGCCACGGCAGAACGTGCCAGTTAT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACTTGTAACTCGGAGCTaGCACTGCTATCCTCCAATG +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRLVTRS*HCYPPM
Trigger: CATTGGAGGATAGCAGTGGCAGCTCCGAGTTACAAG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCCTTGTAACTCGGAGCTaGCACTGCTATCCTCCAATG +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCLVTRS*HCYPPM
Trigger: CATTGGAGGATAGCAGTGGCAGCTCCGAGTTACAAG...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp TTTGCACATCTCTGTCAATGCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTTGTTCTCTGTCCGTCTaGGAAAAGGTAGGTGATGAT +
Preference number: 4 (lower is better)
Translates to: FAHLCQCGLPSSQVFLPACSLSV*EKVGDD
Trigger: ATCATCACCTACCTTTTCCCAGACGGACAGAGAACA...AGCAGGAAGAAACACCTGAGATGATGGCAGCCCGCATTGACAGAGATGTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAGATCTGGCTTGTTCTaGGTTGGCTCTTTGCACACC +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRRSGLF*VGSLHT
Trigger: GGTGTGCAAAGAGCCAACCCAGAACAAGCCAGATCT...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGGCAGGAGCTCTGGGTaGAGGCGGTATACTAGGGTC +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCGRSSG*RRYTRV
Trigger: GACCCTAGTATACCGCCTCCACCCAGAGCTCCTGCC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCTTCTAACATCCACCTaGGTGACGGTCCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCLLTST*VTVPGG
Trigger: GCCCCCTGGGACCGTCACCCAGGTGGATGTTAGAAG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCAAATTCATCAGGAGGTaGAGGTTTTGCCCGCAGCGT +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCKFIRR*RFCPQR
Trigger: ACGCTGCGGGCAAAACCTCCACCTCCTGATGAATTT...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAAATTCATCAGGAGGTaGAGGTTTTGCCCGCAGCGT +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRKFIRR*RFCPQR
Trigger: ACGCTGCGGGCAAAACCTCCACCTCCTGATGAATTT...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTTGGCCACTCTGCTCTaGCTTTCATCCAAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCLATLL*LSSKFL
Trigger: GAGGAACTTGGATGAAAGCCAGAGCAGAGTGGCCAA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATTGGCCACTCTGCTCTaGCTTTCATCCAAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRLATLL*LSSKFL
Trigger: GAGGAACTTGGATGAAAGCCAGAGCAGAGTGGCCAA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTAGTATGAGTATAAGGTaGATCAGCACGCCCCAATCC +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPSMSIR*ISTPQS
Trigger: GGATTGGGGCGTGCTGATCCACCTTATACTCATACT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTAGTATCAGCTGGTCTTaGGCCATACTCCATCCTTTG +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPSISWS*AILHPL
Trigger: CAAAGGATGGAGTATGGCCCAAGACCAGCTGATACT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCACAGGAACAGGTGCTaGAGTGGAAGGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCHRNRC*SGRGKG
Trigger: CCCCTTCCCCCTTCCACTCCAGCACCTGTTCCTGTG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTAGTTGTTTGTGTCTCTaGCTGTCTCGCACGATACTG +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPSCLCL*LSRTIL
Trigger: CAGTATCGTGCGAGACAGCCAGAGACACAAACAACT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATGGCACGTTCTGCCGTaGCACATGGAATTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRWHVLP*HMEFLL
Trigger: CAGAAGAAATTCCATGTGCCACGGCAGAACGTGCCA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTGGCACGTTCTGCCGTaGCACATGGAATTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCWHVLP*HMEFLL
Trigger: CAGAAGAAATTCCATGTGCCACGGCAGAACGTGCCA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTAGTGATATTGATAACTaGCACGTTCTGCCGTGGCAC +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPSDIDN*HVLPWH
Trigger: GTGCCACGGCAGAACGTGCCAGTTATCAATATCACT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTCGTCTTCACATCCTCTaGTGTGGAGTCGTAAGTGAT +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPRLHIL*CGVVSD
Trigger: ATCACTTACGACTCCACACCAGAGGATGTGAAGACG...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCCAGACAGCGTTCGCTaGTTTGGGCCGTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCPDSVR*FGPSLG
Trigger: ACCCAGTGACGGCCCAAACCAGCGAACGCTGTCTGG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646918.1
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTACTGCTCGGAGACTTTaGCATCCTGGCTGTCTTTTA +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPTARRL*HPGCLL
Trigger: TAAAAGACAGCCAGGATGCCAAAGTCTCCGAGCAGT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646918.1
ENST00000647087.1
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTCACTCCTGGATATTTaGTCCTCTCCGGGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPSLLDI*SSPGLC
Trigger: ACACAAACCCGGAGAGGACCAAATATCCAGGAGTGA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642278.1
CDS-3UTR TCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATATCTGACACACTGCTaGCACTGTCCCGTGCATAAT +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRYLTHC*HCPVHN
Trigger: ATTATGCACGGGACAGTGTCAGCAGTGTGTCAGATA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTCACACTGGAAGAGATaGAGATCTGGCTTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCSHWKR*RSGLFW
Trigger: CCAGAACAAGCCAGATCTTCATCTCTTCCAGTGTGA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATCACACTGGAAGAGATaGAGATCTGGCTTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRSHWKR*RSGLFW
Trigger: CCAGAACAAGCCAGATCTTCATCTCTTCCAGTGTGA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTGTTTCTTCCTGCTCATaGTACTGCCTTGGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPVSSCS*YCLGFS
Trigger: TGAGAAACCAAGGCAGTATCATGAGCAGGAAGAAAC...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp CCTTCTCCACTGCCAGCAGCCAACCACTGTCCTGACAACCTTTCCATGAATATGGGAGTAAACAAAAAGTaGACCAAATCTGCAGCACTA +
Preference number: 4 (lower is better)
Translates to: PSPLPAANHCPDNLSMNMGVNKK*TKSAAL
Trigger: TAGTGCTGCAGATTTGGTTCACTTTTTGTTTACTCC...CATATTCATGGAAAGGTTGTCAGGACAGTGGTTGGCTGCTGGCAGTGGAGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546261.1
CDS-3UTR TCA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCACCAAGTTCCTCCCAATaGCATCCACAGCTGCCGTTC +
Preference number: 4 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKAPSSSQ*HPQLPF
Trigger: GAACGGCAGCTGTGGATGTCATTGGGAGGAACTTGG...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR TCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTATTTCCTGTTTGCGCTaGTGTTCTGCTACATTTGCC +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPISCLR*CSATFA
Trigger: GGCAAATGTAGCAGAACATCAGCGCAAACAGGAAAT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAGGCTGGATGATACTCTaGTACACTGGAATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRGWMIL*YTGMLC
Trigger: ACAGAGCATTCCAGTGTATCAGAGTATCATCCAGCC...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCGGCTGGATGATACTCTaGTACACTGGAATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCGWMIL*YTGMLC
Trigger: ACAGAGCATTCCAGTGTATCAGAGTATCATCCAGCC...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATGTAAATGTTGCTACTaGACGCATAGCCATCGGCTG +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRCKCCY*THSHRL
Trigger: CAGCCGATGGCTATGCGTTCAGTAGCAACATTTACA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTGTAAATGTTGCTACTaGACGCATAGCCATCGGCTG +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCCKCCY*THSHRL
Trigger: CAGCCGATGGCTATGCGTTCAGTAGCAACATTTACA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACTGGAGCTGCTGTTTTaGCGTGTTATATTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRLELLF*RVIFAG
Trigger: CCCAGCAAATATAACACGTCAAAACAGCAGCTCCAG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCCTGGAGCTGCTGTTTTaGCGTGTTATATTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCLELLF*RVIFAG
Trigger: CCCAGCAAATATAACACGTCAAAACAGCAGCTCCAG...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTGGTCAGTCTGTGGATaGGTTCATCTTGCACTTCCT +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCWSVCG*VHLALP
Trigger: AGGAAGTGCAAGATGAACTCATCCACAGACTGACCA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATGGTCAGTCTGTGGATaGGTTCATCTTGCACTTCCT +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRWSVCG*VHLALP
Trigger: AGGAAGTGCAAGATGAACTCATCCACAGACTGACCA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCATGATACTGCCTTGGTTTTCAGTTCATCCTTATTaGGAGAGAAAAGTTGTGCAC +
Preference number: 4 (lower is better)
Translates to: AGCHHLRCFFLLMILPWFSVHPY*ERKVVH
Trigger: GTGCACAACTTTTCTCTCTCAATAAGGATGAACTGA...AAACCAAGGCAGTATCATGAGCAGGAAGAAACACCTGAGATGATGGCAGCCCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR TCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCAAAAGATTCCACTCCTaGATCACTAGCGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCKRFHS*ITSGST
Trigger: AGTGCTGCCGCTAGTGATTCAGGAGTGGAATCTTTT...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCGAGCTATGCCCTGAATaGCAGACACCATATTCACAG +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCELCPE*QTPYSQ
Trigger: CTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTC...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTAGTTCTCACGTTGTTTaGCTCGAATCTTGTAGACGG +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPSSHVV*LESCRR
Trigger: CCGTCTACAAGATTCGAGTCAAACAACGTGAGAACT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
CDS-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTGCTGACACTGTCCCGTaGATAATTCTTCCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPADTVP*IILPLF
Trigger: GAACAAAGGAAGAATTATGCACGGGACAGTGTCAGC...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTCTTGAGTCCACACTTTaGCCTTGGCATCAAGCAATT +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPLESTL*PWHQAI
Trigger: AATTGCTTGATGCCAAGGGCAAAGTGTGGACTCAAG...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GAGTATAAGGTGGATCAGCACGCCCCAATCCAGATTCTGGAGGTCTCACAATATCTTGAGTCCACACTTTaGCCTTGGCATCAAGCAATT +
Preference number: 4 (lower is better)
Translates to: EYKVDQHAPIQILEVSQYLESTL*PWHQAI
Trigger: AATTGCTTGATGCCAAGGGCAAAGTGTGGACTCAAG...ATATTGTGAGACCTCCAGAATCTGGATTGGGGCGTGCTGATCCACCTTATACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR GCA 90 bp AACCAAATCTGCAGCACTAGGATTCTGAATATGAGACTTCAGTTTGGCCAGAAGGCACATCTCTGTCAATaGGGGCTGCCATCATCTCAG +
Preference number: 4 (lower is better)
Translates to: NQICSTRILNMRLQFGQKAHLCQ*GLPSSQ
Trigger: CTGAGATGATGGCAGCCCGCATTGACAGAGATGTGC...CTTCTGGCCAAACTGAAGTCTCATATTCAGAATCCTAGTGCTGCAGATTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543468.5
ENST00000546261.1
CDS-3UTR GCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCGGACCTCCTGTTGCCTaGACCACCATATTTAATGGA +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCGPPVA*TTIFNG
Trigger: TCCATTAAATATGGTGGTGCAGGCAACAGGAGGTCC...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAGGACCTCCTGTTGCCTaGACCACCATATTTAATGGA +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRGPPVA*TTIFNG
Trigger: TCCATTAAATATGGTGGTGCAGGCAACAGGAGGTCC...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTAATGACATCCACAGCTaGCGTTCATCACCATTGACA +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPNDIHS*RSSPLT
Trigger: TGTCAATGGTGATGAACGGCAGCTGTGGATGTCATT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GATAACTGGCACGTTCTGCCGTGGCACATGGAATTTCTTCTGAGCGGCACTCCGTCTGATACACTGGAATaGTCTGTGGATAATCTTTTT +
Preference number: 4 (lower is better)
Translates to: DNWHVLPWHMEFLLSGTPSDTLE*SVDNLF
Trigger: AAAAAGATTATCCACAGAGCATTCCAGTGTATCAGA...CGGAGTGCCGCTCAGAAGAAATTCCATGTGCCACGGCAGAACGTGCCAGTTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTCCAGAGTCTCCACTTaGATTTCGAACTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPSRVST*ISNFPP
Trigger: TGGTGGAAAGTTCGAAATGCAAGTGGAGACTCTGGA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCATAACTGGCACGTTCTaGCGTGGCACATGGAATTTC +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCITGTF*RGTWNF
Trigger: GAAATTCCATGTGCCACGGCAGAACGTGCCAGTTAT...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAATAACTGGCACGTTCTaGCGTGGCACATGGAATTTC +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRITGTF*RGTWNF
Trigger: GAAATTCCATGTGCCACGGCAGAACGTGCCAGTTAT...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp ATTTGCACATCTCTGTCAATGCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCAGCTATACAAGGAGTTaGAATCAACAGAGCCATGAC +
Preference number: 4 (lower is better)
Translates to: ICTSLSMRAAIISGVSSCSYTRS*NQQSHD
Trigger: GTCATGGCTCTGTTGATTGCAACTCCTTGTATAGCT...GCAGGAAGAAACACCTGAGATGATGGCAGCCCGCATTGACAGAGATGTGCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTCCAATCAGACTTCACTaGACTAGGCTGACCTCTATT +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPPIRLH*TRLTSI
Trigger: AATAGAGGTCAGCCTAGTGCAGTGAAGTCTGATTGG...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646828.1
CDS-3UTR GCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCCCTGGCTGTCTTTTATaGTCCCATACTGCCTCAAGT +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCPGCLL*SHTASS
Trigger: ACTTGAGGCAGTATGGGAGCATAAAAGACAGCCAGG...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646918.1
ENST00000647087.1
CDS-3UTR GCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCACCTGCTTTCCCATTTaGTCCACAGTTGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCTCFPI*STVVAF
Trigger: GAAAGCCACAACTGTGGAGCAAATGGGAAAGCAGGT...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646918.1
CDS-3UTR GCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCGCAACCTCTAGAACCTaGTTTCCCATTTGCTCCACA +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCATSRT*FPICST
Trigger: TGTGGAGCAAATGGGAAAGCAGGTTCTAGAGGTTGC...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646918.1
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTGTTCTCTGTCCGTCTaGGAAAAGGTAGGTGATGAT +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPCSLSV*EKVGDD
Trigger: ATCATCACCTACCTTTTCCCAGACGGACAGAGAACA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCTTCTAACATCCACCTaGGTGACGGTCCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTLLTST*VTVPGG
Trigger: GCCCCCTGGGACCGTCACCCAGGTGGATGTTAGAAG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGCTTCTAACATCCACCTaGGTGACGGTCCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVLLTST*VTVPGG
Trigger: GCCCCCTGGGACCGTCACCCAGGTGGATGTTAGAAG...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281172.10
ENST00000543523.5
CDS-3UTR CCA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCATTCTCAAAGTCCCCTTaGTCGGCTGCCCATGCAGAC +
Preference number: 4 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKAFSKSP*SAAHAD
Trigger: GTCTGCATGGGCAGCCGACCAAGGGGACTTTGAGAA...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTCTCATGATACTGCCTTaGTTTCTCAAAGTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPLMILP*FLKVPL
Trigger: CAAGGGGACTTTGAGAAACCAAGGCAGTATCATGAG...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp CATCTGAGATTTCCTTCGGTCCACCGGAAGTTGTTTGTGTCTCTGGCTGTCTCGGATACTCTGATACACTaGAATGCTCTGTGGATAATC +
Preference number: 4 (lower is better)
Translates to: HLRFPSVHRKLFVSLAVSDTLIH*NALWII
Trigger: GATTATCCACAGAGCATTCCAGTGTATCAGAGTATC...CGAGACAGCCAGAGACACAAACAACTTCCGGTGGACCGAAGGAAATCTCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CCA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCAACAGCAGCTTCCCCTTaGTCCAGGTGGGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKATAASP*SRWDPL
Trigger: AAGAGGATCCCACCTGGACCAAGGGGAAGCTGCTGT...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTCCCCAATCCAGATTCTaGAGGTCTCACAATATCCAA +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPPQSRF*RSHNIQ
Trigger: TTGGATATTGTGAGACCTCCAGAATCTGGATTGGGG...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCAGTATGAGTATAAGGTaGATCAGCACGCCCCAATCC +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCSMSIR*ISTPQS
Trigger: GGATTGGGGCGTGCTGATCCACCTTATACTCATACT...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAGTATGAGTATAAGGTaGATCAGCACGCCCCAATCC +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRSMSIR*ISTPQS
Trigger: GGATTGGGGCGTGCTGATCCACCTTATACTCATACT...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAGTATCAGCTGGTCTTaGGCCATACTCCATCCTTTG +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRSISWS*AILHPL
Trigger: CAAAGGATGGAGTATGGCCCAAGACCAGCTGATACT...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCAGTATCAGCTGGTCTTaGGCCATACTCCATCCTTTG +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCSISWS*AILHPL
Trigger: CAAAGGATGGAGTATGGCCCAAGACCAGCTGATACT...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCACAGGAACAGGTGCTaGAGTGGAAGGGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTHRNRC*SGRGKG
Trigger: CCCCTTCCCCCTTCCACTCCAGCACCTGTTCCTGTG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAGTTGTTTGTGTCTCTaGCTGTCTCGCACGATACTG +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRSCLCL*LSRTIL
Trigger: CAGTATCGTGCGAGACAGCCAGAGACACAAACAACT...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GGAGCTGCCACTGCTATCCTCCAATGCAGCTTTTTGTACAGTGATTTGGCTATAAGTTGTTTGTGTCTCTaGCTGTCTCGCACGATACTG +
Preference number: 4 (lower is better)
Translates to: GAATAILQCSFLYSDLAISCLCL*LSRTIL
Trigger: CAGTATCGTGCGAGACAGCCAGAGACACAAACAACT...TATAGCCAAATCACTGTACAAAAAGCTGCATTGGAGGATAGCAGTGGCAGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTCCAATGGTCAGTCTGTaGATGAGTTCATCTTGCACT +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPPMVSL*MSSSCT
Trigger: AGTGCAAGATGAACTCATCCACAGACTGACCATTGG...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAGTGATATTGATAACTaGCACGTTCTGCCGTGGCAC +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRSDIDN*HVLPWH
Trigger: GTGCCACGGCAGAACGTGCCAGTTATCAATATCACT...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCAGTGATATTGATAACTaGCACGTTCTGCCGTGGCAC +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCSDIDN*HVLPWH
Trigger: GTGCCACGGCAGAACGTGCCAGTTATCAATATCACT...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCCGTCTTCACATCCTCTaGTGTGGAGTCGTAAGTGAT +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCRLHIL*CGVVSD
Trigger: ATCACTTACGACTCCACACCAGAGGATGTGAAGACG...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTGGTCCTTGGACTTATaGGAGTGGGAACAACTTTCA +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPWSLDL*EWEQLS
Trigger: TGAAAGTTGTTCCCACTCCCATAAGTCCAAGGACCA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646918.1
CDS-3UTR TCA 90 bp TCAGGCTCACAGCTCTGTCATCCACTTGAAGAATCATATCTTGAGTCCACACTTTATCTGACACACTGCTaGCACTGTCCCGTGCATAAT +
Preference number: 4 (lower is better)
Translates to: SGSQLCHPLEESYLESTLYLTHC*HCPVHN
Trigger: ATTATGCACGGGACAGTGTCAGCAGTGTGTCAGATA...AAGTGTGGACTCAAGATATGATTCTTCAAGTGGATGACAGAGCTGTGAGCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536956.5
CDS-3UTR TCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTGTATTGAGATATATCTaGCACACTGCTGACACTGTC +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPVLRYI*HTADTV
Trigger: GACAGTGTCAGCAGTGTGTCAGATATATCTCAATAC...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp AAACAGTCAAGAAATTCATCAGGAGGTGGAGGTTTTGCCCGCAGCGTTAAAACATCACACTGGAAGAGATaGAGATCTGGCTTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: KQSRNSSGGGGFARSVKTSHWKR*RSGLFW
Trigger: CCAGAACAAGCCAGATCTTCATCTCTTCCAGTGTGA...TGTTTTAACGCTGCGGGCAAAACCTCCACCTCCTGATGAATTTCTTGACTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR TCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAGTTTCTTCCTGCTCATaGTACTGCCTTGGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRVSSCS*YCLGFS
Trigger: TGAGAAACCAAGGCAGTATCATGAGCAGGAAGAAAC...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCGTTTCTTCCTGCTCATaGTACTGCCTTGGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCVSSCS*YCLGFS
Trigger: TGAGAAACCAAGGCAGTATCATGAGCAGGAAGAAAC...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCCAAGTTCCTCCCAATaGCATCCACAGCTGCCGTTC +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCPSSSQ*HPQLPF
Trigger: GAACGGCAGCTGTGGATGTCATTGGGAGGAACTTGG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCATTTCCTGTTTGCGCTaGTGTTCTGCTACATTTGCC +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCISCLR*CSATFA
Trigger: GGCAAATGTAGCAGAACATCAGCGCAAACAGGAAAT...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAATTTCCTGTTTGCGCTaGTGTTCTGCTACATTTGCC +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRISCLR*CSATFA
Trigger: GGCAAATGTAGCAGAACATCAGCGCAAACAGGAAAT...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCAATTTGCTGGGACCTTTaGCACAGGAACAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKAICWDL*HRNRCW
Trigger: CCAGCACCTGTTCCTGTGTCAAAGGTCCCAGCAAAT...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR TCA 90 bp AAACAGTCAAGAAATTCATCAGGAGGTGGAGGTTTTGCCCGCAGCGTTAAAACATGGTCAGTCTGTGGATaGGTTCATCTTGCACTTCCT +
Preference number: 4 (lower is better)
Translates to: KQSRNSSGGGGFARSVKTWSVCG*VHLALP
Trigger: AGGAAGTGCAAGATGAACTCATCCACAGACTGACCA...TGTTTTAACGCTGCGGGCAAAACCTCCACCTCCTGATGAATTTCTTGACTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR TCA 90 bp GAGTATAAGGTGGATCAGCACGCCCCAATCCAGATTCTGGAGGTCTCACAATATCAATCAACAGAGCCATaGCAAACTCTCTTGAGAATG +
Preference number: 4 (lower is better)
Translates to: EYKVDQHAPIQILEVSQYQSTEP*QTLLRM
Trigger: CATTCTCAAGAGAGTTTGTCATGGCTCTGTTGATTG...ATATTGTGAGACCTCCAGAATCTGGATTGGGGCGTGCTGATCCACCTTATACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR TCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTCAATCAACAGAGCCATaGCAAACTCTCTTGAGAATG +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPQSTEP*QTLLRM
Trigger: CATTCTCAAGAGAGTTTGTCATGGCTCTGTTGATTG...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTTTGCTCACGAGCACTaGACTAGCGCCTGCGCCCTT +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTFAHEH*TSACAL
Trigger: AAGGGCGCAGGCGCTAGTTCAGTGCTCGTGAGCAAA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647087.1
CDS-3UTR TCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCAGTTCTCACGTTGTTTaGCTCGAATCTTGTAGACGG +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCSSHVV*LESCRR
Trigger: CCGTCTACAAGATTCGAGTCAAACAACGTGAGAACT...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
CDS-3UTR TCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTAAGAAGAAGCCTAGCTaGAATACACAATGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPKKKPS*NTQWLQ
Trigger: CTGAAGCCATTGTGTATTTCAGCTAGGCTTCTTCTT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646828.1
CDS-3UTR TCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGAGTCAGGGTCAGGGTaGTGCAGCCTCAGAAAGACT +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCESGSG*CSLRKT
Trigger: AGTCTTTCTGAGGCTGCATCACCCTGACCCTGACTC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646918.1
CDS-3UTR TCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTATGGGCCAAGGGGGTaGAAGCATGAACAAATATTG +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCYGPRG*KHEQIL
Trigger: CAATATTTGTTCATGCTTTCACCCCCTTGGCCCATA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642278.1
CDS-3UTR TCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATACAGACAATTAGGCTaGACAGAAGCTAAGGACAGC +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRYRQLG*TEAKDS
Trigger: GCTGTCCTTAGCTTCTGTTCAGCCTAATTGTCTGTA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646828.1
CDS-3UTR GCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAGCTGACACTGTCCCGTaGATAATTCTTCCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRADTVP*IILPLF
Trigger: GAACAAAGGAAGAATTATGCACGGGACAGTGTCAGC...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCGCTGACACTGTCCCGTaGATAATTCTTCCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCADTVP*IILPLF
Trigger: GAACAAAGGAAGAATTATGCACGGGACAGTGTCAGC...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACTTGAGTCCACACTTTaGCCTTGGCATCAAGCAATT +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRLESTL*PWHQAI
Trigger: AATTGCTTGATGCCAAGGGCAAAGTGTGGACTCAAG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCCTTGAGTCCACACTTTaGCCTTGGCATCAAGCAATT +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCLESTL*PWHQAI
Trigger: AATTGCTTGATGCCAAGGGCAAAGTGTGGACTCAAG...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTATCACAGCTTGGCAGTaGTGGATTGTGTTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPITAWQ*WIVFKG
Trigger: TCCTTTAAACACAATCCAGCACTGCCAAGCTGTGAT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCCGGTATACTAGGGTCTaGATTGGAAATCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCRYTRV*IGNHPQ
Trigger: CTGAGGATGATTTCCAATGCAGACCCTAGTATACCG...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACGGTATACTAGGGTCTaGATTGGAAATCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRRYTRV*IGNHPQ
Trigger: CTGAGGATGATTTCCAATGCAGACCCTAGTATACCG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCACCATGCAGACCAGGCTaGCACTCGACTTCTAACATC +
Preference number: 4 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKAPCRPG*HSTSNI
Trigger: GATGTTAGAAGTCGAGTGGCAGCCTGGTCTGCATGG...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000644374.1
CDS-3UTR GCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCAATGACATCCACAGCTaGCGTTCATCACCATTGACA +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCNDIHS*RSSPLT
Trigger: TGTCAATGGTGATGAACGGCAGCTGTGGATGTCATT...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGGGGCTCCCAGCCATTaGGGAATCGTGGAACATATG +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCGAPSH*GIVEHM
Trigger: CATATGTTCCACGATTCCGCAATGGCTGGGAGCCCC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTTTGCGCTGATGTTCTaGTACATTTGCCACAGATTC +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPFALMF*YICHRF
Trigger: GAATCTGTGGCAAATGTAGCAGAACATCAGCGCAAA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTCGAACTTTCCACCATTaGTTCCGATCATCAAGTATC +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPRTFHH*FRSSSI
Trigger: GATACTTGATGATCGGAAGCAATGGTGGAAAGTTCG...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTCCAGAGTCTCCACTTaGATTTCGAACTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCSRVST*ISNFPP
Trigger: TGGTGGAAAGTTCGAAATGCAAGTGGAGACTCTGGA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTCACTGTCACTGGAGCTaGTGTTTTGACGTGTTATAT +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPHCHWS*CFDVLY
Trigger: ATATAACACGTCAAAACAGCAGCTCCAGTGACAGTG...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTGTCTCGCACGATACTaGCACCACTGTCACTGGAGC +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCCLARY*HHCHWS
Trigger: GCTCCAGTGACAGTGGTGGCAGTATCGTGCGAGACA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTTCTGCTTTCCCATTTaGTCCACAGTTGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCFCFPI*STVVAF
Trigger: GAAAGCCACAACTGTGGAGCAAATGGGAAAGCAGAA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647087.1
CDS-3UTR CCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATGTTCTCTGTCCGTCTaGGAAAAGGTAGGTGATGAT +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRCSLSV*EKVGDD
Trigger: ATCATCACCTACCTTTTCCCAGACGGACAGAGAACA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTGTTCTCTGTCCGTCTaGGAAAAGGTAGGTGATGAT +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCCSLSV*EKVGDD
Trigger: ATCATCACCTACCTTTTCCCAGACGGACAGAGAACA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp AATATGAGACTTCAGTTTGGCCAGAAGGTTAAATCCGTGTTTAAACTTTTGGAACTTCTAACATCCACCTaGGTGACGGTCCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: NMRLQFGQKVKSVFKLLELLTST*VTVPGG
Trigger: GCCCCCTGGGACCGTCACCCAGGTGGATGTTAGAAG...TTCCAAAAGTTTAAACACGGATTTAACCTTCTGGCCAAACTGAAGTCTCATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546261.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTTCTCAAAGTCCCCTTaGTCGGCTGCCCATGCAGAC +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCFSKSP*SAAHAD
Trigger: GTCTGCATGGGCAGCCGACCAAGGGGACTTTGAGAA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCCTCATGATACTGCCTTaGTTTCTCAAAGTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCLMILP*FLKVPL
Trigger: CAAGGGGACTTTGAGAAACCAAGGCAGTATCATGAG...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCACAGCAGCTTCCCCTTaGTCCAGGTGGGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCTAASP*SRWDPL
Trigger: AAGAGGATCCCACCTGGACCAAGGGGAAGCTGCTGT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTATGGCGATTAGAAGTTaGCTTAAAAGCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPMAIRS*LKSNSS
Trigger: GCTGCTGTTGCTTTTAAGCCAACTTCTAATCGCCAT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCCCCCAATCCAGATTCTaGAGGTCTCACAATATCCAA +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCPQSRF*RSHNIQ
Trigger: TTGGATATTGTGAGACCTCCAGAATCTGGATTGGGG...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACCCCAATCCAGATTCTaGAGGTCTCACAATATCCAA +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRPQSRF*RSHNIQ
Trigger: TTGGATATTGTGAGACCTCCAGAATCTGGATTGGGG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCCCAATGGTCAGTCTGTaGATGAGTTCATCTTGCACT +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCPMVSL*MSSSCT
Trigger: AGTGCAAGATGAACTCATCCACAGACTGACCATTGG...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACCAATGGTCAGTCTGTaGATGAGTTCATCTTGCACT +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRPMVSL*MSSSCT
Trigger: AGTGCAAGATGAACTCATCCACAGACTGACCATTGG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTAGCCTTCCAAGTAGGTaGGACCACAGGCACCACCAC +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTSLPSR*DHRHHH
Trigger: GTGGTGGTGCCTGTGGTCCCACCTACTTGGAAGGCT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646918.1
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTTTGCTCCACAGTTGTaGCTTTCACATACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPFAPQL*LSHTGR
Trigger: TCTTCCAGTATGTGAAAGCCACAACTGTGGAGCAAA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646918.1
ENST00000647087.1
CDS-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTCCTGTGATGGATATTaGGACCACCAAAGTGAACCA +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCSCDGY*DHQSEP
Trigger: TGGTTCACTTTGGTGGTCCCAATATCCATCACAGGA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642278.1
CDS-3UTR TCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAGTATTGAGATATATCTaGCACACTGCTGACACTGTC +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRVLRYI*HTADTV
Trigger: GACAGTGTCAGCAGTGTGTCAGATATATCTCAATAC...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GCTCACAGCTCTGTCATCCACTTGAAGAATCATATCTTGAGTCCACACTTTGCCGTATTGAGATATATCTaGCACACTGCTGACACTGTC +
Preference number: 4 (lower is better)
Translates to: AHSSVIHLKNHILSPHFAVLRYI*HTADTV
Trigger: GACAGTGTCAGCAGTGTGTCAGATATATCTCAATAC...GGCAAAGTGTGGACTCAAGATATGATTCTTCAAGTGGATGACAGAGCTGTGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536956.5
CDS-3UTR TCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCGTATTGAGATATATCTaGCACACTGCTGACACTGTC +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCVLRYI*HTADTV
Trigger: GACAGTGTCAGCAGTGTGTCAGATATATCTCAATAC...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTGTTCAACACGGTATTaGGATATATCTGACACACTG +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPCSTRY*DISDTL
Trigger: CAGTGTGTCAGATATATCTCAATACCGTGTTGAACA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp AAACAGTCAAGAAATTCATCAGGAGGTGGAGGTTTTGCCCGCAGCGTTAAAACAGTTTCTTCCTGCTCATaGTACTGCCTTGGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: KQSRNSSGGGGFARSVKTVSSCS*YCLGFS
Trigger: TGAGAAACCAAGGCAGTATCATGAGCAGGAAGAAAC...TGTTTTAACGCTGCGGGCAAAACCTCCACCTCCTGATGAATTTCTTGACTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543468.5
ENST00000546261.1
CDS-3UTR TCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTGGAGTAAACAAAAAGTaGACCAAATCTGCAGCACTA +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPGVNKK*TKSAAL
Trigger: TAGTGCTGCAGATTTGGTTCACTTTTTGTTTACTCC...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCCAAGTTCCTCCCAATaGCATCCACAGCTGCCGTTC +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTPSSSQ*HPQLPF
Trigger: GAACGGCAGCTGTGGATGTCATTGGGAGGAACTTGG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GCCCCAATCCAGATTCTGGAGGTCTCACAATATCCAAAATGTTATTTGGCACAATGTAAATGTTGCTACTaGACGCATAGCCATCGGCTG +
Preference number: 4 (lower is better)
Translates to: APIQILEVSQYPKCYLAQCKCCY*THSHRL
Trigger: CAGCCGATGGCTATGCGTTCAGTAGCAACATTTACA...TTGTGCCAAATAACATTTTGGATATTGTGAGACCTCCAGAATCTGGATTGGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR TCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCATTTGCTGGGACCTTTaGCACAGGAACAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCICWDL*HRNRCW
Trigger: CCAGCACCTGTTCCTGTGTCAAAGGTCCCAGCAAAT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTCAGTTCATCCTTATTaGGAGAGAAAAGTTGTGCAC +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPSVHPY*ERKVVH
Trigger: GTGCACAACTTTTCTCTCTCAATAAGGATGAACTGA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCCAATCAACAGAGCCATaGCAAACTCTCTTGAGAATG +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCQSTEP*QTLLRM
Trigger: CATTCTCAAGAGAGTTTGTCATGGCTCTGTTGATTG...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACAATCAACAGAGCCATaGCAAACTCTCTTGAGAATG +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRQSTEP*QTLLRM
Trigger: CATTCTCAAGAGAGTTTGTCATGGCTCTGTTGATTG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCGATTTTGAGAAGACATaGCCTCTTTCGCATTTGTGC +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCDFEKT*PLSHLC
Trigger: GCACAAATGCGAAAGAGGTCATGTCTTCTCAAAATC...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTCTTCTAAGTCGTAAGTaGATGAACGAGAGTACTAAG +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPLLSRK*MNESTK
Trigger: CTTAGTACTCTCGTTCATTCACTTACGACTTAGAAG...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646918.1
ENST00000647087.1
CDS-3UTR GCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAATCACAGCTTGGCAGTaGTGGATTGTGTTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRITAWQ*WIVFKG
Trigger: TCCTTTAAACACAATCCAGCACTGCCAAGCTGTGAT...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCATCACAGCTTGGCAGTaGTGGATTGTGTTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCITAWQ*WIVFKG
Trigger: TCCTTTAAACACAATCCAGCACTGCCAAGCTGTGAT...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCCATGCAGACCAGGCTaGCACTCGACTTCTAACATC +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCPCRPG*HSTSNI
Trigger: GATGTTAGAAGTCGAGTGGCAGCCTGGTCTGCATGG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCATCTGTCAATGCGGGCTaGCATCATCTCAGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKASVNAG*HHLRCF
Trigger: GAAACACCTGAGATGATGGCAGCCCGCATTGACAGA...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGCACATCTCTGTCAATaGGGGCTGCCATCATCTCAG +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCAHLCQ*GLPSSQ
Trigger: CTGAGATGATGGCAGCCCGCATTGACAGAGATGTGC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp ATCTCTGTCAATGCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCATGATAAGAAAGCTCAGAAAATaGTTCTGCTGCTTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: ISVNAGCHHLRCFFLLMIRKLRK*FCCFLE
Trigger: CTCCAAAAAGCAGCAGAAGCATTTTCTGAGCTTTCT...TATCATGAGCAGGAAGAAACACCTGAGATGATGGCAGCCCGCATTGACAGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000543468.5
ENST00000546261.1
CDS-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTAGAAAGCTCAGAAAATaGTTCTGCTGCTTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPRKLRK*FCCFLE
Trigger: CTCCAAAAAGCAGCAGAAGCATTTTCTGAGCTTTCT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGGGGGCTCCCAGCCATTaGGGAATCGTGGAACATATG +
Preference number: 4 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVGAPSH*GIVEHM
Trigger: CATATGTTCCACGATTCCGCAATGGCTGGGAGCCCC...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
CDS-3UTR GCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTGGGGCTCCCAGCCATTaGGGAATCGTGGAACATATG +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTGAPSH*GIVEHM
Trigger: CATATGTTCCACGATTCCGCAATGGCTGGGAGCCCC...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTTTGCGCTGATGTTCTaGTACATTTGCCACAGATTC +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCFALMF*YICHRF
Trigger: GAATCTGTGGCAAATGTAGCAGAACATCAGCGCAAA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATTTGCGCTGATGTTCTaGTACATTTGCCACAGATTC +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRFALMF*YICHRF
Trigger: GAATCTGTGGCAAATGTAGCAGAACATCAGCGCAAA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACGAACTTTCCACCATTaGTTCCGATCATCAAGTATC +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRRTFHH*FRSSSI
Trigger: GATACTTGATGATCGGAAGCAATGGTGGAAAGTTCG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACACTGTCACTGGAGCTaGTGTTTTGACGTGTTATAT +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRHCHWS*CFDVLY
Trigger: ATATAACACGTCAAAACAGCAGCTCCAGTGACAGTG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTGTCTCGCACGATACTaGCACCACTGTCACTGGAGC +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTCLARY*HHCHWS
Trigger: GCTCCAGTGACAGTGGTGGCAGTATCGTGCGAGACA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTACTGCTATCCTCCAATaGAGCTTTTTGTACAGTGAT +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPTAILQ*SFLYSD
Trigger: ATCACTGTACAAAAAGCTGCATTGGAGGATAGCAGT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCACTCGGAGCTGCCACTaGTATCCTCCAATGCAGCTT +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCTRSCH*YPPMQL
Trigger: AAGCTGCATTGGAGGATAGCAGTGGCAGCTCCGAGT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCACTTGTAACTCGGAGCTaGCACTGCTATCCTCCAATG +
Preference number: 4 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKALVTRS*HCYPPM
Trigger: CATTGGAGGATAGCAGTGGCAGCTCCGAGTTACAAG...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR GCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAGCTATACAAGGAGTTaGAATCAACAGAGCCATGAC +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRSYTRS*NQQSHD
Trigger: GTCATGGCTCTGTTGATTGCAACTCCTTGTATAGCT...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCAGCTATACAAGGAGTTaGAATCAACAGAGCCATGAC +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCSYTRS*NQQSHD
Trigger: GTCATGGCTCTGTTGATTGCAACTCCTTGTATAGCT...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTTTATGCTCCCATACTaGCTCAAGTTGCTTCTAAGT +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPFMLPY*LKLLLS
Trigger: ACTTAGAAGCAACTTGAGGCAGTATGGGAGCATAAA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646918.1
ENST00000647087.1
CDS-3UTR CCA 90 bp GAGTATAAGGTGGATCAGCACGCCCCAATCCAGATTCTGGAGGTCTCACAATATGCCATTCATCTGAGATaGGTACATTCCAAAACTACT +
Preference number: 4 (lower is better)
Translates to: EYKVDQHAPIQILEVSQYAIHLR*VHSKTT
Trigger: AGTAGTTTTGGAATGTACCCATCTCAGATGAATGGC...ATATTGTGAGACCTCCAGAATCTGGATTGGGGCGTGCTGATCCACCTTATACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTCCACACTTTGCCCTTaGCATCAAGCAATTTCAATT +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPSTLCP*HQAISI
Trigger: AATTGAAATTGCTTGATGCCAAGGGCAAAGTGTGGA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTACAGCTTGGCAGTGCTaGATTGTGTTTAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPTAWQC*IVFKGK
Trigger: TTTTCCTTTAAACACAATCCAGCACTGCCAAGCTGT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTGGCTTGTTCTGGGTTaGCTCTTTGCACACCAGTGC +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCWLVLG*LFAHQC
Trigger: GCACTGGTGTGCAAAGAGCCAACCCAGAACAAGCCA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCAAGATCTGGCTTGTTCTaGGTTGGCTCTTTGCACACC +
Preference number: 4 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKARSGLF*VGSLHT
Trigger: GGTGTGCAAAGAGCCAACCCAGAACAAGCCAGATCT...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTTCTCAAAGTCCCCTTaGTCGGCTGCCCATGCAGAC +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTFSKSP*SAAHAD
Trigger: GTCTGCATGGGCAGCCGACCAAGGGGACTTTGAGAA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTAATAAACTGTTCTTTTaGCCACTCTGCTCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPNKLFF*PLCSGF
Trigger: AAAGCCAGAGCAGAGTGGCCAAAAGAACAGTTTATT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCATAAAGTTCAGCATTaGGGGCTCCCAGCCATTGCG +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCHKVQH*GLPAIA
Trigger: CGCAATGGCTGGGAGCCCCCAATGCTGAACTTTATG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp TGCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCATGATACTGCCTTGGTTCACTGGAATGCTCTGTaGATAATCTTTTTATTTCCT +
Preference number: 4 (lower is better)
Translates to: CGLPSSQVFLPAHDTALVHWNAL*IIFLFP
Trigger: AGGAAATAAAAAGATTATCCACAGAGCATTCCAGTG...AACCAAGGCAGTATCATGAGCAGGAAGAAACACCTGAGATGATGGCAGCCCGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTGATACTCTGATACACTaGAATGCTCTGTGGATAATC +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPDTLIH*NALWII
Trigger: GATTATCCACAGAGCATTCCAGTGTATCAGAGTATC...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTACAGCAGCTTCCCCTTaGTCCAGGTGGGATCCTCTT +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTTAASP*SRWDPL
Trigger: AAGAGGATCCCACCTGGACCAAGGGGAAGCTGCTGT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAATGGCGATTAGAAGTTaGCTTAAAAGCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRMAIRS*LKSNSS
Trigger: GCTGCTGTTGCTTTTAAGCCAACTTCTAATCGCCAT...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCATGGCGATTAGAAGTTaGCTTAAAAGCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCMAIRS*LKSNSS
Trigger: GCTGCTGTTGCTTTTAAGCCAACTTCTAATCGCCAT...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp ATTTGCACATCTCTGTCAATGCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCATCCAAAATGTTATTTaGCACAAATCCAGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: ICTSLSMRAAIISGVSSCIQNVI*HKSRVS
Trigger: GGAGACTCTGGATTTGTGCCAAATAACATTTTGGAT...GCAGGAAGAAACACCTGAGATGATGGCAGCCCGCATTGACAGAGATGTGCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CCA 90 bp GTTATTTGGCACAAATCCAGAGTCTCCACTTGCATTTCGAACTTTCCACCATTGCGTCTTCACATCCTCTaGTGTGGAGTCGTAAGTGAT +
Preference number: 4 (lower is better)
Translates to: VIWHKSRVSTCISNFPPLRLHIL*CGVVSD
Trigger: ATCACTTACGACTCCACACCAGAGGATGTGAAGACG...CAATGGTGGAAAGTTCGAAATGCAAGTGGAGACTCTGGATTTGTGCCAAATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTGCATGTCCAAGGTATaGCTGTACTTTACAGTTCAT +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPCMSKV*LYFTVH
Trigger: ATGAACTGTAAAGTACAGCCATACCTTGGACATGCA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTGCTGACGCTGGTCCTTaGACTTATGGGAGTGGGAAC +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTADAGP*TYGSGN
Trigger: GTTCCCACTCCCATAAGTCCAAGGACCAGCGTCAGC...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646918.1
CDS-3UTR CCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATTTAAGCATGAAGGATaGAGATGGAAGAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRFKHEG*RWKSQG
Trigger: ACCCTGACTCTTCCATCTCCATCCTTCATGCTTAAA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646918.1
CDS-3UTR CCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACTTTTTGCCTACAAGTaGTTTTCTTTCCTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRLFAYK*FSFLPS
Trigger: GGAAGGGAGGAAAGAAAACCACTTGTAGGCAAAAAG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000642278.1
3UTR CAA 72 bp GCTCACAGCTCTGTCATCCACTTGAAGAATCATATCTaGAGTCCACACTTTGCCCTTGGCATCAAGCAATTT +
Preference number: 4 (lower is better)
Translates to: AHSSVIHLKNHI*SPHFALGIKQF
Trigger: AAATTGCTTGATGCCAAGGGCAAAGTGTGGACTCAAGATATGATTCTTCAAGTGGATGACAGAGCTGTGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536956.5
CDS-3UTR TCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTGTTCAACACGGTATTaGGATATATCTGACACACTG +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCCSTRY*DISDTL
Trigger: CAGTGTGTCAGATATATCTCAATACCGTGTTGAACA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATGTTCAACACGGTATTaGGATATATCTGACACACTG +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRCSTRY*DISDTL
Trigger: CAGTGTGTCAGATATATCTCAATACCGTGTTGAACA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GCCCCAATCCAGATTCTGGAGGTCTCACAATATCCAAAATGTTATTTGGCACAAGTTTCTTCCTGCTCATaGTACTGCCTTGGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: APIQILEVSQYPKCYLAQVSSCS*YCLGFS
Trigger: TGAGAAACCAAGGCAGTATCATGAGCAGGAAGAAAC...TTGTGCCAAATAACATTTTGGATATTGTGAGACCTCCAGAATCTGGATTGGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR TCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCGGAGTAAACAAAAAGTaGACCAAATCTGCAGCACTA +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCGVNKK*TKSAAL
Trigger: TAGTGCTGCAGATTTGGTTCACTTTTTGTTTACTCC...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTATTTGCTGGGACCTTTaGCACAGGAACAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTICWDL*HRNRCW
Trigger: CCAGCACCTGTTCCTGTGTCAAAGGTCCCAGCAAAT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCACTGGAGCTGCTGTTTTaGCGTGTTATATTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKALELLF*RVIFAG
Trigger: CCCAGCAAATATAACACGTCAAAACAGCAGCTCCAG...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR TCA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCATGGTCAGTCTGTGGATaGGTTCATCTTGCACTTCCT +
Preference number: 4 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKAWSVCG*VHLALP
Trigger: AGGAAGTGCAAGATGAACTCATCCACAGACTGACCA...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR TCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCACATGGAATTTCTTCTaGGCGGCACTCCGACCAATG +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCTWNFF*AALRPM
Trigger: CATTGGTCGGAGTGCCGCTCAGAAGAAATTCCATGT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTCAGTTCATCCTTATTaGGAGAGAAAAGTTGTGCAC +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCSVHPY*ERKVVH
Trigger: GTGCACAACTTTTCTCTCTCAATAAGGATGAACTGA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATCAGTTCATCCTTATTaGGAGAGAAAAGTTGTGCAC +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRSVHPY*ERKVVH
Trigger: GTGCACAACTTTTCTCTCTCAATAAGGATGAACTGA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GGTCTCACAATATCCAAAATGTTATTTGGCACAAATCCAGAGTCTCCACTTGCAAAAAGATTCCACTCCTaGATCACTAGCGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: GLTISKMLFGTNPESPLAKRFHS*ITSGST
Trigger: AGTGCTGCCGCTAGTGATTCAGGAGTGGAATCTTTT...TGCAAGTGGAGACTCTGGATTTGTGCCAAATAACATTTTGGATATTGTGAGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR TCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTCCTTTGCTAGATTTTaGGAAGACATGACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCSFARF*EDMTSF
Trigger: GAAAGAGGTCATGTCTTCTCAAAATCTAGCAAAGGA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTCGTCCAGGCAATATTaGGAGGCCATTCCACTCAGT +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCSSRQY*EAIPLS
Trigger: ACTGAGTGGAATGGCCTCTCAATATTGCCTGGACGA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543612.5
CDS-3UTR TCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACCTTCAAAGCACATTTaGCAACATGTGCTTTGTCAA +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRPSKHI*QHVLCQ
Trigger: TTGACAAAGCACATGTTGTCAAATGTGCTTTGAAGG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642278.1
CDS-3UTR TCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACCCCAGAGGTATAGATaGACATTTAAACAAAGATCC +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRPQRYR*TFKQRS
Trigger: GGATCTTTGTTTAAATGTTCATCTATACCTCTGGGG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642278.1
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTCTGGGTTGGCTCTTTaGACACCAGTGCAAGAACTG +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCSGLAL*TPVQEL
Trigger: CAGTTCTTGCACTGGTGTGCAAAGAGCCAACCCAGA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGCCATGCAGACCAGGCTaGCACTCGACTTCTAACATC +
Preference number: 4 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVPCRPG*HSTSNI
Trigger: GATGTTAGAAGTCGAGTGGCAGCCTGGTCTGCATGG...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281172.10
ENST00000543523.5
CDS-3UTR GCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCCATGCAGACCAGGCTaGCACTCGACTTCTAACATC +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTPCRPG*HSTSNI
Trigger: GATGTTAGAAGTCGAGTGGCAGCCTGGTCTGCATGG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTCTGTCAATGCGGGCTaGCATCATCTCAGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCSVNAG*HHLRCF
Trigger: GAAACACCTGAGATGATGGCAGCCCGCATTGACAGA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTGCACATCTCTGTCAATaGGGGCTGCCATCATCTCAG +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTAHLCQ*GLPSSQ
Trigger: CTGAGATGATGGCAGCCCGCATTGACAGAGATGTGC...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAGAAAGCTCAGAAAATaGTTCTGCTGCTTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRRKLRK*FCCFLE
Trigger: CTCCAAAAAGCAGCAGAAGCATTTTCTGAGCTTTCT...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCAGAAAGCTCAGAAAATaGTTCTGCTGCTTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCRKLRK*FCCFLE
Trigger: CTCCAAAAAGCAGCAGAAGCATTTTCTGAGCTTTCT...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTAAAGTGAACCAAATCTaGAGCACTAGGATTCTGAAT +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPKVNQI*STRILN
Trigger: ATTCAGAATCCTAGTGCTGCAGATTTGGTTCACTTT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp AAAGTGAACCAAATCTGCAGCACTAGGATTCTGAATATGAGACTTCAGTTTGGCGGACCTCCTGTTGCCTaGACCACCATATTTAATGGA +
Preference number: 4 (lower is better)
Translates to: KVNQICSTRILNMRLQFGGPPVA*TTIFNG
Trigger: TCCATTAAATATGGTGGTGCAGGCAACAGGAGGTCC...GCCAAACTGAAGTCTCATATTCAGAATCCTAGTGCTGCAGATTTGGTTCACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTATTTGCCACAGATTCTaGCAGTTGATAAAGATCTTG +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPICHRF*QLIKIL
Trigger: CAAGATCTTTATCAACTGGCAGAATCTGTGGCAAAT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp AAACAGTCAAGAAATTCATCAGGAGGTGGAGGTTTTGCCCGCAGCGTTAAAACACGAACTTTCCACCATTaGTTCCGATCATCAAGTATC +
Preference number: 4 (lower is better)
Translates to: KQSRNSSGGGGFARSVKTRTFHH*FRSSSI
Trigger: GATACTTGATGATCGGAAGCAATGGTGGAAAGTTCG...TGTTTTAACGCTGCGGGCAAAACCTCCACCTCCTGATGAATTTCTTGACTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR GCA 90 bp CAAATCTGCAGCACTAGGATTCTGAATATGAGACTTCAGTTTGGCCAGAAGGTTTCCAGAGTCTCCACTTaGATTTCGAACTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: QICSTRILNMRLQFGQKVSRVST*ISNFPP
Trigger: TGGTGGAAAGTTCGAAATGCAAGTGGAGACTCTGGA...AACCTTCTGGCCAAACTGAAGTCTCATATTCAGAATCCTAGTGCTGCAGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR GCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAACTGCTATCCTCCAATaGAGCTTTTTGTACAGTGAT +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRTAILQ*SFLYSD
Trigger: ATCACTGTACAAAAAGCTGCATTGGAGGATAGCAGT...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp TTGAGAGAGAAAAGTTGTGCACCATTTAATACTCCAAGACTATTGACAGTCACAACTCGGAGCTGCCACTaGTATCCTCCAATGCAGCTT +
Preference number: 4 (lower is better)
Translates to: LREKSCAPFNTPRLLTVTTRSCH*YPPMQL
Trigger: AAGCTGCATTGGAGGATAGCAGTGGCAGCTCCGAGT...TGTGACTGTCAATAGTCTTGGAGTATTAAATGGTGCACAACTTTTCTCTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR GCA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGACTCGGAGCTGCCACTaGTATCCTCCAATGCAGCTT +
Preference number: 4 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVTRSCH*YPPMQL
Trigger: AAGCTGCATTGGAGGATAGCAGTGGCAGCTCCGAGT...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
CDS-3UTR GCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTACTCGGAGCTGCCACTaGTATCCTCCAATGCAGCTT +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTTRSCH*YPPMQL
Trigger: AAGCTGCATTGGAGGATAGCAGTGGCAGCTCCGAGT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCTTGTAACTCGGAGCTaGCACTGCTATCCTCCAATG +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCLVTRS*HCYPPM
Trigger: CATTGGAGGATAGCAGTGGCAGCTCCGAGTTACAAG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATGTAATGCACACCAATaGAGACTACTTCCTTTGCTA +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRCNAHQ*RLLPLL
Trigger: TAGCAAAGGAAGTAGTCTGCATTGGTGTGCATTACA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTAGCTATCCTGGATCCTaGCTTAGTTTTCTGAATTTT +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPSYPGS*LSFLNF
Trigger: AAAATTCAGAAAACTAAGGCAGGATCCAGGATAGCT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642278.1
CDS-3UTR GCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCATGTGCTTTGTCAAATaGACAAATGCACATGGACAC +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCMCFVK*TNAHGH
Trigger: GTGTCCATGTGCATTTGTGCATTTGACAAAGCACAT...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642278.1
CDS-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCGCCATTCATCTGAGATaGGTACATTCCAAAACTACT +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCAIHLR*VHSKTT
Trigger: AGTAGTTTTGGAATGTACCCATCTCAGATGAATGGC...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTCCACACTTTGCCCTTaGCATCAAGCAATTTCAATT +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCSTLCP*HQAISI
Trigger: AATTGAAATTGCTTGATGCCAAGGGCAAAGTGTGGA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATCCACACTTTGCCCTTaGCATCAAGCAATTTCAATT +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRSTLCP*HQAISI
Trigger: AATTGAAATTGCTTGATGCCAAGGGCAAAGTGTGGA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAACAGCTTGGCAGTGCTaGATTGTGTTTAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRTAWQC*IVFKGK
Trigger: TTTTCCTTTAAACACAATCCAGCACTGCCAAGCTGT...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCACAGCTTGGCAGTGCTaGATTGTGTTTAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCTAWQC*IVFKGK
Trigger: TTTTCCTTTAAACACAATCCAGCACTGCCAAGCTGT...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGTGGCTTGTTCTGGGTTaGCTCTTTGCACACCAGTGC +
Preference number: 4 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVWLVLG*LFAHQC
Trigger: GCACTGGTGTGCAAAGAGCCAACCCAGAACAAGCCA...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTGGCTTGTTCTGGGTTaGCTCTTTGCACACCAGTGC +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTWLVLG*LFAHQC
Trigger: GCACTGGTGTGCAAAGAGCCAACCCAGAACAAGCCA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCAGATCTGGCTTGTTCTaGGTTGGCTCTTTGCACACC +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCRSGLF*VGSLHT
Trigger: GGTGTGCAAAGAGCCAACCCAGAACAAGCCAGATCT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCAAATTCATCAGGAGGTaGAGGTTTTGCCCGCAGCGT +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCKFIRR*RFCPQR
Trigger: ACGCTGCGGGCAAAACCTCCACCTCCTGATGAATTT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTTGGCCACTCTGCTCTaGCTTTCATCCAAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCLATLL*LSSKFL
Trigger: GAGGAACTTGGATGAAAGCCAGAGCAGAGTGGCCAA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp TGCTGTTTTGACGTGTTATATTTGCTGGGACCTTTGACACAGGAACAGGTGCTGAATAAACTGTTCTTTTaGCCACTCTGCTCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: CCFDVLYLLGPLTQEQVLNKLFF*PLCSGF
Trigger: AAAGCCAGAGCAGAGTGGCCAAAAGAACAGTTTATT...CAGCACCTGTTCCTGTGTCAAAGGTCCCAGCAAATATAACACGTCAAAACAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCAATAAACTGTTCTTTTaGCCACTCTGCTCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCNKLFF*PLCSGF
Trigger: AAAGCCAGAGCAGAGTGGCCAAAAGAACAGTTTATT...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGCATAAAGTTCAGCATTaGGGGCTCCCAGCCATTGCG +
Preference number: 4 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVHKVQH*GLPAIA
Trigger: CGCAATGGCTGGGAGCCCCCAATGCTGAACTTTATG...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCATAAAGTTCAGCATTaGGGGCTCCCAGCCATTGCG +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTHKVQH*GLPAIA
Trigger: CGCAATGGCTGGGAGCCCCCAATGCTGAACTTTATG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAGATACTCTGATACACTaGAATGCTCTGTGGATAATC +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRDTLIH*NALWII
Trigger: GATTATCCACAGAGCATTCCAGTGTATCAGAGTATC...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTAGTCATACTTGGATTTaGCATATTTCTTGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPSHTWI*HISWVV
Trigger: CACAACCCAAGAAATATGCCAAATCCAAGTATGACT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTATCCAAAATGTTATTTaGCACAAATCCAGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPIQNVI*HKSRVS
Trigger: GGAGACTCTGGATTTGTGCCAAATAACATTTTGGAT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTGGCACGTTCTGCCGTaGCACATGGAATTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCWHVLP*HMEFLL
Trigger: CAGAAGAAATTCCATGTGCCACGGCAGAACGTGCCA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCAAGTGATATTGATAACTaGCACGTTCTGCCGTGGCAC +
Preference number: 4 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKASDIDN*HVLPWH
Trigger: GTGCCACGGCAGAACGTGCCAGTTATCAATATCACT...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CCA 90 bp ATCTTGTTCCATTGTGGCTCCCATAAAGTTCAGCATTGGGGGCTCCCAGCCATTTTCCTGTTTATACCCTaGGATGGGGATAAAATAATT +
Preference number: 4 (lower is better)
Translates to: ILFHCGSHKVQHWGLPAIFLFIP*DGDKII
Trigger: AATTATTTTATCCCCATCCCAGGGTATAAACAGGAA...AATGGCTGGGAGCCCCCAATGCTGAACTTTATGGGAGCCACAATGGAACAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTGCATGTCCAAGGTATaGCTGTACTTTACAGTTCAT +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCCMSKV*LYFTVH
Trigger: ATGAACTGTAAAGTACAGCCATACCTTGGACATGCA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATGCATGTCCAAGGTATaGCTGTACTTTACAGTTCAT +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRCMSKV*LYFTVH
Trigger: ATGAACTGTAAAGTACAGCCATACCTTGGACATGCA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGTGCCAAGTGACCTTTaGCACAACGTCAGAAAGGGT +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCVPSDL*HNVRKG
Trigger: ACCCTTTCTGACGTTGTGCCAAAGGTCACTTGGCAC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543612.5
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCATGAAGGATGGAGATaGAAGAGTCAGGGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCHEGWR*KSQGQG
Trigger: ACCCTGACCCTGACTCTTCCATCTCCATCCTTCATG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646918.1
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCATACCCCAGCTTTATaGGCCAAGGGGGTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTHTPAL*AKGVKA
Trigger: TGCTTTCACCCCCTTGGCCCATAAAGCTGGGGTATG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000642278.1
CDS-3UTR TCA 90 bp AAATATCATCCTTTAGAACCGAGAGCTCACTGTTGTTCCTTGCTACAAAGTCATTATCTGACACACTGCTaGCACTGTCCCGTGCATAAT +
Preference number: 4 (lower is better)
Translates to: KYHPLEPRAHCCSLLQSHYLTHC*HCPVHN
Trigger: ATTATGCACGGGACAGTGTCAGCAGTGTGTCAGATA...ATGACTTTGTAGCAAGGAACAACAGTGAGCTCTCGGTTCTAAAGGATGATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR TCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTATCTGACACACTGCTaGCACTGTCCCGTGCATAAT +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCYLTHC*HCPVHN
Trigger: ATTATGCACGGGACAGTGTCAGCAGTGTGTCAGATA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTCACACTGGAAGAGATaGAGATCTGGCTTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCSHWKR*RSGLFW
Trigger: CCAGAACAAGCCAGATCTTCATCTCTTCCAGTGTGA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGGCTGGATGATACTCTaGTACACTGGAATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCGWMIL*YTGMLC
Trigger: ACAGAGCATTCCAGTGTATCAGAGTATCATCCAGCC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTGTAAATGTTGCTACTaGACGCATAGCCATCGGCTG +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCCKCCY*THSHRL
Trigger: CAGCCGATGGCTATGCGTTCAGTAGCAACATTTACA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCTGGAGCTGCTGTTTTaGCGTGTTATATTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCLELLF*RVIFAG
Trigger: CCCAGCAAATATAACACGTCAAAACAGCAGCTCCAG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTGGTCAGTCTGTGGATaGGTTCATCTTGCACTTCCT +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCWSVCG*VHLALP
Trigger: AGGAAGTGCAAGATGAACTCATCCACAGACTGACCA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGACATGGAATTTCTTCTaGGCGGCACTCCGACCAATG +
Preference number: 4 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVTWNFF*AALRPM
Trigger: CATTGGTCGGAGTGCCGCTCAGAAGAAATTCCATGT...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
CDS-3UTR TCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTACATGGAATTTCTTCTaGGCGGCACTCCGACCAATG +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTTWNFF*AALRPM
Trigger: CATTGGTCGGAGTGCCGCTCAGAAGAAATTCCATGT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCAAAAGATTCCACTCCTaGATCACTAGCGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCKRFHS*ITSGST
Trigger: AGTGCTGCCGCTAGTGATTCAGGAGTGGAATCTTTT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGAGCTATGCCCTGAATaGCAGACACCATATTCACAG +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCELCPE*QTPYSQ
Trigger: CTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTACTTATGTGCCAAGTaGCCTTTGGCACAACGTCAG +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCYLCAK*PLAQRQ
Trigger: CTGACGTTGTGCCAAAGGTCACTTGGCACATAAGTA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543612.5
CDS-3UTR GCA 90 bp TATTCCATCATCAACAGTGATCATAGCATCTTTCCGATCCAGGACAAAGGTAGTCTTGAGTCCACACTTTaGCCTTGGCATCAAGCAATT +
Preference number: 4 (lower is better)
Translates to: YSIINSDHSIFPIQDKGSLESTL*PWHQAI
Trigger: AATTGCTTGATGCCAAGGGCAAAGTGTGGACTCAAG...ACTACCTTTGTCCTGGATCGGAAAGATGCTATGATCACTGTTGATGATGGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536956.5
CDS-3UTR GCA 90 bp GCCCCAATCCAGATTCTGGAGGTCTCACAATATCCAAAATGTTATTTGGCACAAATCACAGCTTGGCAGTaGTGGATTGTGTTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: APIQILEVSQYPKCYLAQITAWQ*WIVFKG
Trigger: TCCTTTAAACACAATCCAGCACTGCCAAGCTGTGAT...TTGTGCCAAATAACATTTTGGATATTGTGAGACCTCCAGAATCTGGATTGGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR GCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTCTGGGTTGGCTCTTTaGACACCAGTGCAAGAACTG +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTSGLAL*TPVQEL
Trigger: CAGTTCTTGCACTGGTGTGCAAAGAGCCAACCCAGA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCAAAGTGAACCAAATCTaGAGCACTAGGATTCTGAAT +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCKVNQI*STRILN
Trigger: ATTCAGAATCCTAGTGCTGCAGATTTGGTTCACTTT...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAAAGTGAACCAAATCTaGAGCACTAGGATTCTGAAT +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRKVNQI*STRILN
Trigger: ATTCAGAATCCTAGTGCTGCAGATTTGGTTCACTTT...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGGACCTCCTGTTGCCTaGACCACCATATTTAATGGA +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCGPPVA*TTIFNG
Trigger: TCCATTAAATATGGTGGTGCAGGCAACAGGAGGTCC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCATTTGCCACAGATTCTaGCAGTTGATAAAGATCTTG +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCICHRF*QLIKIL
Trigger: CAAGATCTTTATCAACTGGCAGAATCTGTGGCAAAT...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAATTTGCCACAGATTCTaGCAGTTGATAAAGATCTTG +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRICHRF*QLIKIL
Trigger: CAAGATCTTTATCAACTGGCAGAATCTGTGGCAAAT...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTCTGATACACTGGAATaGTCTGTGGATAATCTTTTT +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPSDTLE*SVDNLF
Trigger: AAAAAGATTATCCACAGAGCATTCCAGTGTATCAGA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCATAACTGGCACGTTCTaGCGTGGCACATGGAATTTC +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCITGTF*RGTWNF
Trigger: GAAATTCCATGTGCCACGGCAGAACGTGCCAGTTAT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCTTGTAACTCGGAGCTaGCACTGCTATCCTCCAATG +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTLVTRS*HCYPPM
Trigger: CATTGGAGGATAGCAGTGGCAGCTCCGAGTTACAAG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp ATCATCAACAGTGATCATAGCATCTTTCCGATCCAGGACAAAGGTAGTCAAGTGGCTGACACTGTCCCGTaGATAATTCTTCCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: IINSDHSIFPIQDKGSQVADTVP*IILPLF
Trigger: AAACAAAGGAAGAATTATGCACGGGACAGTGTCAGC...CACTTGACTACCTTTGTCCTGGATCGGAAAGATGCTATGATCACTGTTGATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536956.5
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCCTGGCTGTCTTTTATaGTCCCATACTGCCTCAAGT +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCPGCLL*SHTASS
Trigger: ACTTGAGGCAGTATGGGAGCATAAAAGACAGCCAGG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000646918.1
ENST00000647087.1
CDS-3UTR CCA 90 bp CAGGCTCACAGCTCTGTCATCCACTTGAAGAATCATATCTTGAGTCCACACTTTACAGCTTGGCAGTGCTaGATTGTGTTTAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: QAHSSVIHLKNHILSPHFTAWQC*IVFKGK
Trigger: TTTTCCTTTAAACACAATCCAGCACTGCCAAGCTGT...AAAGTGTGGACTCAAGATATGATTCTTCAAGTGGATGACAGAGCTGTGAGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536956.5
CDS-3UTR CCA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAGATCTGGCTTGTTCTaGGTTGGCTCTTTGCACACC +
Preference number: 4 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVRSGLF*VGSLHT
Trigger: GGTGTGCAAAGAGCCAACCCAGAACAAGCCAGATCT...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTAGATCTGGCTTGTTCTaGGTTGGCTCTTTGCACACC +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTRSGLF*VGSLHT
Trigger: GGTGTGCAAAGAGCCAACCCAGAACAAGCCAGATCT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTAAATTCATCAGGAGGTaGAGGTTTTGCCCGCAGCGT +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTKFIRR*RFCPQR
Trigger: ACGCTGCGGGCAAAACCTCCACCTCCTGATGAATTT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAATTCATCAGGAGGTaGAGGTTTTGCCCGCAGCGT +
Preference number: 4 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVKFIRR*RFCPQR
Trigger: ACGCTGCGGGCAAAACCTCCACCTCCTGATGAATTT...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTTGGCCACTCTGCTCTaGCTTTCATCCAAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTLATLL*LSSKFL
Trigger: GAGGAACTTGGATGAAAGCCAGAGCAGAGTGGCCAA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGTTGGCCACTCTGCTCTaGCTTTCATCCAAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVLATLL*LSSKFL
Trigger: GAGGAACTTGGATGAAAGCCAGAGCAGAGTGGCCAA...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
CDS-3UTR CCA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTCACTGGAATGCTCTGTaGATAATCTTTTTATTTCCT +
Preference number: 4 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPHWNAL*IIFLFP
Trigger: AGGAAATAAAAAGATTATCCACAGAGCATTCCAGTG...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAGTCATACTTGGATTTaGCATATTTCTTGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRSHTWI*HISWVV
Trigger: CACAACCCAAGAAATATGCCAAATCCAAGTATGACT...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCAGTCATACTTGGATTTaGCATATTTCTTGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCSHTWI*HISWVV
Trigger: CACAACCCAAGAAATATGCCAAATCCAAGTATGACT...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCATCCAAAATGTTATTTaGCACAAATCCAGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCIQNVI*HKSRVS
Trigger: GGAGACTCTGGATTTGTGCCAAATAACATTTTGGAT...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCAGTATGAGTATAAGGTaGATCAGCACGCCCCAATCC +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCSMSIR*ISTPQS
Trigger: GGATTGGGGCGTGCTGATCCACCTTATACTCATACT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCAGTATCAGCTGGTCTTaGGCCATACTCCATCCTTTG +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCSISWS*AILHPL
Trigger: CAAAGGATGGAGTATGGCCCAAGACCAGCTGATACT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCAGTTGTTTGTGTCTCTaGCTGTCTCGCACGATACTG +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCSCLCL*LSRTIL
Trigger: CAGTATCGTGCGAGACAGCCAGAGACACAAACAACT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCACCAATGGTCAGTCTGTaGATGAGTTCATCTTGCACT +
Preference number: 4 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKAPMVSL*MSSSCT
Trigger: AGTGCAAGATGAACTCATCCACAGACTGACCATTGG...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTGGCACGTTCTGCCGTaGCACATGGAATTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTWHVLP*HMEFLL
Trigger: CAGAAGAAATTCCATGTGCCACGGCAGAACGTGCCA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCAGTGATATTGATAACTaGCACGTTCTGCCGTGGCAC +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCSDIDN*HVLPWH
Trigger: GTGCCACGGCAGAACGTGCCAGTTATCAATATCACT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCGTCTTCACATCCTCTaGTGTGGAGTCGTAAGTGAT +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCRLHIL*CGVVSD
Trigger: ATCACTTACGACTCCACACCAGAGGATGTGAAGACG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCTAAGGACAGCACCTTaGCAGGATCCTCATTGTCCA +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTLRTAP*QDPHCP
Trigger: TGGACAATGAGGATCCTGCCAAGGTGCTGTCCTTAG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646828.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCAACGTCAGAAAGGGTaGGACTCTAAGCGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCQRQKG*DSKRQF
Trigger: AAACTGACGCTTAGAGTCCCACCCTTTCTGACGTTG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543612.5
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGAGACTTTGGCATCCTaGCTGTCTTTTATGCTCCCA +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCETLAS*LSFMLP
Trigger: TGGGAGCATAAAAGACAGCCAGGATGCCAAAGTCTC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000646918.1
ENST00000647087.1
3UTR CAA 72 bp TACATTTGCCACAGATTCTGCCAGTTGATAAAGATCTaGTTCCATTGTGGCTCCCATAAAGTTCAGCATTGG +
Preference number: 4 (lower is better)
Translates to: YICHRFCQLIKI*FHCGSHKVQHW
Trigger: CCAATGCTGAACTTTATGGGAGCCACAATGGAACAAGATCTTTATCAACTGGCAGAATCTGTGGCAAATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR CAA 72 bp CCAAAATGTTATTTGGCACAAATCCAGAGTCTCCACTaGCATTTCGAACTTTCCACCATTGCTTCCGATCAT +
Preference number: 4 (lower is better)
Translates to: PKCYLAQIQSLH*HFELSTIASDH
Trigger: ATGATCGGAAGCAATGGTGGAAAGTTCGAAATGCAAGTGGAGACTCTGGATTTGTGCCAAATAACATTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR TCA 90 bp GGTCTCACAATATCCAAAATGTTATTTGGCACAAATCCAGAGTCTCCACTTGCAGTATTGAGATATATCTaGCACACTGCTGACACTGTC +
Preference number: 4 (lower is better)
Translates to: GLTISKMLFGTNPESPLAVLRYI*HTADTV
Trigger: GACAGTGTCAGCAGTGTGTCAGATATATCTCAATAC...TGCAAGTGGAGACTCTGGATTTGTGCCAAATAACATTTTGGATATTGTGAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR TCA 90 bp CCACTTGAAGAATCATATCTTGAGTCCACACTTTGCCCTTGGCATCAAGCAATTTGTTCAACACGGTATTaGGATATATCTGACACACTG +
Preference number: 4 (lower is better)
Translates to: PLEESYLESTLCPWHQAICSTRY*DISDTL
Trigger: CAGTGTGTCAGATATATCTCAATACCGTGTTGAACA...AATTGCTTGATGCCAAGGGCAAAGTGTGGACTCAAGATATGATTCTTCAAGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536956.5
CDS-3UTR TCA 90 bp CAAATCTGCAGCACTAGGATTCTGAATATGAGACTTCAGTTTGGCCAGAAGGTTTGTTCAACACGGTATTaGGATATATCTGACACACTG +
Preference number: 4 (lower is better)
Translates to: QICSTRILNMRLQFGQKVCSTRY*DISDTL
Trigger: CAGTGTGTCAGATATATCTCAATACCGTGTTGAACA...AACCTTCTGGCCAAACTGAAGTCTCATATTCAGAATCCTAGTGCTGCAGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR TCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTCACACTGGAAGAGATaGAGATCTGGCTTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTSHWKR*RSGLFW
Trigger: CCAGAACAAGCCAGATCTTCATCTCTTCCAGTGTGA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGTTTCTTCCTGCTCATaGTACTGCCTTGGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCVSSCS*YCLGFS
Trigger: TGAGAAACCAAGGCAGTATCATGAGCAGGAAGAAAC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCATTTCCTGTTTGCGCTaGTGTTCTGCTACATTTGCC +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCISCLR*CSATFA
Trigger: GGCAAATGTAGCAGAACATCAGCGCAAACAGGAAAT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTGGCTGGATGATACTCTaGTACACTGGAATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTGWMIL*YTGMLC
Trigger: ACAGAGCATTCCAGTGTATCAGAGTATCATCCAGCC...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGTGTAAATGTTGCTACTaGACGCATAGCCATCGGCTG +
Preference number: 4 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVCKCCY*THSHRL
Trigger: CAGCCGATGGCTATGCGTTCAGTAGCAACATTTACA...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
CDS-3UTR TCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTGTAAATGTTGCTACTaGACGCATAGCCATCGGCTG +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTCKCCY*THSHRL
Trigger: CAGCCGATGGCTATGCGTTCAGTAGCAACATTTACA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGCTGGAGCTGCTGTTTTaGCGTGTTATATTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVLELLF*RVIFAG
Trigger: CCCAGCAAATATAACACGTCAAAACAGCAGCTCCAG...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
CDS-3UTR TCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCTGGAGCTGCTGTTTTaGCGTGTTATATTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTLELLF*RVIFAG
Trigger: CCCAGCAAATATAACACGTCAAAACAGCAGCTCCAG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGTGGTCAGTCTGTGGATaGGTTCATCTTGCACTTCCT +
Preference number: 4 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVWSVCG*VHLALP
Trigger: AGGAAGTGCAAGATGAACTCATCCACAGACTGACCA...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
CDS-3UTR TCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTGGTCAGTCTGTGGATaGGTTCATCTTGCACTTCCT +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTWSVCG*VHLALP
Trigger: AGGAAGTGCAAGATGAACTCATCCACAGACTGACCA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTAAAAGATTCCACTCCTaGATCACTAGCGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTKRFHS*ITSGST
Trigger: AGTGCTGCCGCTAGTGATTCAGGAGTGGAATCTTTT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTGAGCTATGCCCTGAATaGCAGACACCATATTCACAG +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTELCPE*QTPYSQ
Trigger: CTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTC...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCAGTTCTCACGTTGTTTaGCTCGAATCTTGTAGACGG +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCSSHVV*LESCRR
Trigger: CCGTCTACAAGATTCGAGTCAAACAACGTGAGAACT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
CDS-3UTR TCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTTCACTGCACTAGGCTaGCCTCTATTTCCTAAGAAG +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCFTALG*PLFPKK
Trigger: CTTCTTAGGAAATAGAGGTCAGCCTAGTGCAGTGAA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646828.1
CDS-3UTR TCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGTTTGGATGATGACCTaGGGAAGTATGATCCATCTG +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCVWMMT*GSMIHL
Trigger: CAGATGGATCATACTTCCTCAGGTCATCATCCAAAC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642939.1
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGCTGACACTGTCCCGTaGATAATTCTTCCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCADTVP*IILPLF
Trigger: GAACAAAGGAAGAATTATGCACGGGACAGTGTCAGC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCTTGAGTCCACACTTTaGCCTTGGCATCAAGCAATT +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCLESTL*PWHQAI
Trigger: AATTGCTTGATGCCAAGGGCAAAGTGTGGACTCAAG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCGGTATACTAGGGTCTaGATTGGAAATCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCRYTRV*IGNHPQ
Trigger: CTGAGGATGATTTCCAATGCAGACCCTAGTATACCG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGGGACCTCCTGTTGCCTaGACCACCATATTTAATGGA +
Preference number: 4 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVGPPVA*TTIFNG
Trigger: TCCATTAAATATGGTGGTGCAGGCAACAGGAGGTCC...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCAATGACATCCACAGCTaGCGTTCATCACCATTGACA +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCNDIHS*RSSPLT
Trigger: TGTCAATGGTGATGAACGGCAGCTGTGGATGTCATT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCATTTGCGCTGATGTTCTaGTACATTTGCCACAGATTC +
Preference number: 4 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKAFALMF*YICHRF
Trigger: GAATCTGTGGCAAATGTAGCAGAACATCAGCGCAAA...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR GCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTCTGATACACTGGAATaGTCTGTGGATAATCTTTTT +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCSDTLE*SVDNLF
Trigger: AAAAAGATTATCCACAGAGCATTCCAGTGTATCAGA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATCTGATACACTGGAATaGTCTGTGGATAATCTTTTT +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRSDTLE*SVDNLF
Trigger: AAAAAGATTATCCACAGAGCATTCCAGTGTATCAGA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCACGAACTTTCCACCATTaGTTCCGATCATCAAGTATC +
Preference number: 4 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKARTFHH*FRSSSI
Trigger: GATACTTGATGATCGGAAGCAATGGTGGAAAGTTCG...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTCCAGAGTCTCCACTTaGATTTCGAACTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCSRVST*ISNFPP
Trigger: TGGTGGAAAGTTCGAAATGCAAGTGGAGACTCTGGA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp CAGTTTGGCCAGAAGGTTAAATCCGTGTTTAAACTTTTGGAAACAGTCAAGAAAATAACTGGCACGTTCTaGCGTGGCACATGGAATTTC +
Preference number: 4 (lower is better)
Translates to: QFGQKVKSVFKLLETVKKITGTF*RGTWNF
Trigger: GAAATTCCATGTGCCACGGCAGAACGTGCCAGTTAT...TTTCTTGACTGTTTCCAAAAGTTTAAACACGGATTTAACCTTCTGGCCAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR GCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTATAACTGGCACGTTCTaGCGTGGCACATGGAATTTC +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTITGTF*RGTWNF
Trigger: GAAATTCCATGTGCCACGGCAGAACGTGCCAGTTAT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCCCTCTTTCGCATTTGTaGTTTCTCATATATAAGAAC +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCPLSHL*FLIYKN
Trigger: GTTCTTATATATGAGAAAGCACAAATGCGAAAGAGG...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTGTTCTCTGTCCGTCTaGGAAAAGGTAGGTGATGAT +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCCSLSV*EKVGDD
Trigger: ATCATCACCTACCTTTTCCCAGACGGACAGAGAACA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCTCATGATACTGCCTTaGTTTCTCAAAGTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCLMILP*FLKVPL
Trigger: CAAGGGGACTTTGAGAAACCAAGGCAGTATCATGAG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCCACTGGAATGCTCTGTaGATAATCTTTTTATTTCCT +
Preference number: 4 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCHWNAL*IIFLFP
Trigger: AGGAAATAAAAAGATTATCCACAGAGCATTCCAGTG...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACACTGGAATGCTCTGTaGATAATCTTTTTATTTCCT +
Preference number: 4 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRHWNAL*IIFLFP
Trigger: AGGAAATAAAAAGATTATCCACAGAGCATTCCAGTG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCAATGGCGATTAGAAGTTaGCTTAAAAGCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKAMAIRS*LKSNSS
Trigger: GCTGCTGTTGCTTTTAAGCCAACTTCTAATCGCCAT...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCCCCAATCCAGATTCTaGAGGTCTCACAATATCCAA +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCPQSRF*RSHNIQ
Trigger: TTGGATATTGTGAGACCTCCAGAATCTGGATTGGGG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTAGTATGAGTATAAGGTaGATCAGCACGCCCCAATCC +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTSMSIR*ISTPQS
Trigger: GGATTGGGGCGTGCTGATCCACCTTATACTCATACT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTAGTATCAGCTGGTCTTaGGCCATACTCCATCCTTTG +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTSISWS*AILHPL
Trigger: CAAAGGATGGAGTATGGCCCAAGACCAGCTGATACT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTAGTTGTTTGTGTCTCTaGCTGTCTCGCACGATACTG +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTSCLCL*LSRTIL
Trigger: CAGTATCGTGCGAGACAGCCAGAGACACAAACAACT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCCAATGGTCAGTCTGTaGATGAGTTCATCTTGCACT +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCPMVSL*MSSSCT
Trigger: AGTGCAAGATGAACTCATCCACAGACTGACCATTGG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTAGTGATATTGATAACTaGCACGTTCTGCCGTGGCAC +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTSDIDN*HVLPWH
Trigger: GTGCCACGGCAGAACGTGCCAGTTATCAATATCACT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCGTCTTCACATCCTCTaGTGTGGAGTCGTAAGTGAT +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTRLHIL*CGVVSD
Trigger: ATCACTTACGACTCCACACCAGAGGATGTGAAGACG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp AACCAAATCTGCAGCACTAGGATTCTGAATATGAGACTTCAGTTTGGCCAGAAGTGCATGTCCAAGGTATaGCTGTACTTTACAGTTCAT +
Preference number: 4 (lower is better)
Translates to: NQICSTRILNMRLQFGQKCMSKV*LYFTVH
Trigger: ATGAACTGTAAAGTACAGCCATACCTTGGACATGCA...CTTCTGGCCAAACTGAAGTCTCATATTCAGAATCCTAGTGCTGCAGATTTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTGAGACTTTGGCATCCTaGCTGTCTTTTATGCTCCCA +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTETLAS*LSFMLP
Trigger: TGGGAGCATAAAAGACAGCCAGGATGCCAAAGTCTC...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646918.1
ENST00000647087.1
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTACTGCTCGGAGACTTTaGCATCCTGGCTGTCTTTTA +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTTARRL*HPGCLL
Trigger: TAAAAGACAGCCAGGATGCCAAAGTCTCCGAGCAGT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000646918.1
ENST00000647087.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGTTTCTTTTCACTCCTaGATATTTGGTCCTCTCCGG +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCVSFHS*IFGPLR
Trigger: CCGGAGAGGACCAAATATCCAGGAGTGAAAAGAAAC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000642278.1
CDS-3UTR TCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGTATTGAGATATATCTaGCACACTGCTGACACTGTC +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCVLRYI*HTADTV
Trigger: GACAGTGTCAGCAGTGTGTCAGATATATCTCAATAC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCAGGAGTAAACAAAAAGTaGACCAAATCTGCAGCACTA +
Preference number: 4 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKAGVNKK*TKSAAL
Trigger: TAGTGCTGCAGATTTGGTTCACTTTTTGTTTACTCC...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR TCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTATTTCCTGTTTGCGCTaGTGTTCTGCTACATTTGCC +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTISCLR*CSATFA
Trigger: GGCAAATGTAGCAGAACATCAGCGCAAACAGGAAAT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGTTGCTTTGTTGCAGTaGATAACTCCACCACTATCA +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCVALLQ*ITPPLS
Trigger: TGATAGTGGTGGAGTTATTCACTGCAACAAAGCAAC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGATTTTGAGAAGACATaGCCTCTTTCGCATTTGTGC +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCDFEKT*PLSHLC
Trigger: GCACAAATGCGAAAGAGGTCATGTCTTCTCAAAATC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp CCACTTGAAGAATCATATCTTGAGTCCACACTTTGCCCTTGGCATCAAGCAATTTCCTTTGTTTTCATCTaGGATGGGTACATTCCAAAA +
Preference number: 4 (lower is better)
Translates to: PLEESYLESTLCPWHQAISFVFI*DGYIPK
Trigger: TTTTGGAATGTACCCATCTCAGATGAAAACAAAGGA...AATTGCTTGATGCCAAGGGCAAAGTGTGGACTCAAGATATGATTCTTCAAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536956.5
CDS-3UTR TCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTGTGTGTTTACCACATaGCGTCCATTACTAGTGCTC +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTCVFTT*RPLLVL
Trigger: GAGCACTAGTAATGGACGTCATGTGGTAAACACACA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543523.5
CDS-3UTR TCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCTTGAAGACCGTAAGTaGATGAACGAGAGTACTAAG +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCLEDRK*MNESTK
Trigger: CTTAGTACTCTCGTTCATTCACTTACGGTCTTCAAG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646828.1
CDS-3UTR GCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTGCTGACACTGTCCCGTaGATAATTCTTCCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTADTVP*IILPLF
Trigger: GAACAAAGGAAGAATTATGCACGGGACAGTGTCAGC...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCTTGAGTCCACACTTTaGCCTTGGCATCAAGCAATT +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTLESTL*PWHQAI
Trigger: AATTGCTTGATGCCAAGGGCAAAGTGTGGACTCAAG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCATCACAGCTTGGCAGTaGTGGATTGTGTTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCITAWQ*WIVFKG
Trigger: TCCTTTAAACACAATCCAGCACTGCCAAGCTGTGAT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCGGTATACTAGGGTCTaGATTGGAAATCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTRYTRV*IGNHPQ
Trigger: CTGAGGATGATTTCCAATGCAGACCCTAGTATACCG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTAATGACATCCACAGCTaGCGTTCATCACCATTGACA +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTNDIHS*RSSPLT
Trigger: TGTCAATGGTGATGAACGGCAGCTGTGGATGTCATT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTTTGCGCTGATGTTCTaGTACATTTGCCACAGATTC +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCFALMF*YICHRF
Trigger: GAATCTGTGGCAAATGTAGCAGAACATCAGCGCAAA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCGAACTTTCCACCATTaGTTCCGATCATCAAGTATC +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCRTFHH*FRSSSI
Trigger: GATACTTGATGATCGGAAGCAATGGTGGAAAGTTCG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTCCAGAGTCTCCACTTaGATTTCGAACTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTSRVST*ISNFPP
Trigger: TGGTGGAAAGTTCGAAATGCAAGTGGAGACTCTGGA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCACTGTCACTGGAGCTaGTGTTTTGACGTGTTATAT +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCHCHWS*CFDVLY
Trigger: ATATAACACGTCAAAACAGCAGCTCCAGTGACAGTG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GGTCTCACAATATCCAAAATGTTATTTGGCACAAATCCAGAGTCTCCACTTGCAACTGCTATCCTCCAATaGAGCTTTTTGTACAGTGAT +
Preference number: 4 (lower is better)
Translates to: GLTISKMLFGTNPESPLATAILQ*SFLYSD
Trigger: ATCACTGTACAAAAAGCTGCATTGGAGGATAGCAGT...TGCAAGTGGAGACTCTGGATTTGTGCCAAATAACATTTTGGATATTGTGAGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCAGCTATACAAGGAGTTaGAATCAACAGAGCCATGAC +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCSYTRS*NQQSHD
Trigger: GTCATGGCTCTGTTGATTGCAACTCCTTGTATAGCT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp AAACAGTCAAGAAATTCATCAGGAGGTGGAGGTTTTGCCCGCAGCGTTAAAACACCTCTTTCGCATTTGTaGTTTCTCATATATAAGAAC +
Preference number: 4 (lower is better)
Translates to: KQSRNSSGGGGFARSVKTPLSHL*FLIYKN
Trigger: GTTCTTATATATGAGAAAGCACAAATGCGAAAGAGG...TGTTTTAACGCTGCGGGCAAAACCTCCACCTCCTGATGAATTTCTTGACTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR GCA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCATGTAATGCACACCAATaGAGACTACTTCCTTTGCTA +
Preference number: 4 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKACNAHQ*RLLPLL
Trigger: TAGCAAAGGAAGTAGTCTGCATTGGTGTGCATTACA...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CCA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCAGCCATTCATCTGAGATaGGTACATTCCAAAACTACT +
Preference number: 4 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKAAIHLR*VHSKTT
Trigger: AGTAGTTTTGGAATGTACCCATCTCAGATGAATGGC...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTGTTCTCTGTCCGTCTaGGAAAAGGTAGGTGATGAT +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTCSLSV*EKVGDD
Trigger: ATCATCACCTACCTTTTCCCAGACGGACAGAGAACA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCATCCACACTTTGCCCTTaGCATCAAGCAATTTCAATT +
Preference number: 4 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKASTLCP*HQAISI
Trigger: AATTGAAATTGCTTGATGCCAAGGGCAAAGTGTGGA...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CCA 90 bp GGTCTCACAATATCCAAAATGTTATTTGGCACAAATCCAGAGTCTCCACTTGCAACAGCTTGGCAGTGCTaGATTGTGTTTAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: GLTISKMLFGTNPESPLATAWQC*IVFKGK
Trigger: TTTTCCTTTAAACACAATCCAGCACTGCCAAGCTGT...TGCAAGTGGAGACTCTGGATTTGTGCCAAATAACATTTTGGATATTGTGAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CCA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGCTCATGATACTGCCTTaGTTTCTCAAAGTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVLMILP*FLKVPL
Trigger: CAAGGGGACTTTGAGAAACCAAGGCAGTATCATGAG...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281172.10
ENST00000543523.5
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCTCATGATACTGCCTTaGTTTCTCAAAGTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTLMILP*FLKVPL
Trigger: CAAGGGGACTTTGAGAAACCAAGGCAGTATCATGAG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCATGGCGATTAGAAGTTaGCTTAAAAGCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCMAIRS*LKSNSS
Trigger: GCTGCTGTTGCTTTTAAGCCAACTTCTAATCGCCAT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGCCCCAATCCAGATTCTaGAGGTCTCACAATATCCAA +
Preference number: 4 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVPQSRF*RSHNIQ
Trigger: TTGGATATTGTGAGACCTCCAGAATCTGGATTGGGG...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCCCCAATCCAGATTCTaGAGGTCTCACAATATCCAA +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTPQSRF*RSHNIQ
Trigger: TTGGATATTGTGAGACCTCCAGAATCTGGATTGGGG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp AAGGTTAAATCCGTGTTTAAACTTTTGGAAACAGTCAAGAAATTCATCAGGAGGAGTATGAGTATAAGGTaGATCAGCACGCCCCAATCC +
Preference number: 4 (lower is better)
Translates to: KVKSVFKLLETVKKFIRRSMSIR*ISTPQS
Trigger: GGATTGGGGCGTGCTGATCCACCTTATACTCATACT...CCTCCTGATGAATTTCTTGACTGTTTCCAAAAGTTTAAACACGGATTTAACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCCAATGGTCAGTCTGTaGATGAGTTCATCTTGCACT +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTPMVSL*MSSSCT
Trigger: AGTGCAAGATGAACTCATCCACAGACTGACCATTGG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp CATCCACTTGAAGAATCATATCTTGAGTCCACACTTTGCCCTTGGCATCAAGCATGTTTTCATCTGAGATaGGTACATTCCAAAACTACT +
Preference number: 4 (lower is better)
Translates to: HPLEESYLESTLCPWHQACFHLR*VHSKTT
Trigger: AGTAGTTTTGGAATGTACCCATCTCAGATGAAAACA...TGCTTGATGCCAAGGGCAAAGTGTGGACTCAAGATATGATTCTTCAAGTGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536956.5
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCCAGGTACAGAAATATaGCCAACTGAGCTCATGAAG +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTPGTEI*PTELMK
Trigger: CTTCATGAGCTCAGTTGGCCATATTTCTGTACCTGG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642939.1
ENST00000645775.1
ENST00000646828.1
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTTGGACTTATGGGAGTaGGAACAACTTTCAACTCGG +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTLDLWE*EQLSTR
Trigger: CCGAGTTGAAAGTTGTTCCCACTCCCATAAGTCCAA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646918.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTTTGCTCCACAGTTGTaGCTTTCACATACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCFAPQL*LSHTGR
Trigger: TCTTCCAGTATGTGAAAGCCACAACTGTGGAGCAAA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646918.1
ENST00000647087.1
3UTR CAA 72 bp GAGAGCTCACTGTTGTTCCTTGCTACAAAGTCATACTaGGATTTGGCATATTTCTTGGGTTGTGTTTTGAGT +
Preference number: 4 (lower is better)
Translates to: ESSLLFLATKSY*DLAYFLGCVLS
Trigger: ACTCAAAACACAACCCAAGAAATATGCCAAATCCAAGTATGACTTTGTAGCAAGGAACAACAGTGAGCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR TCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTGTATTGAGATATATCTaGCACACTGCTGACACTGTC +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTVLRYI*HTADTV
Trigger: GACAGTGTCAGCAGTGTGTCAGATATATCTCAATAC...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTGTTCAACACGGTATTaGGATATATCTGACACACTG +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCCSTRY*DISDTL
Trigger: CAGTGTGTCAGATATATCTCAATACCGTGTTGAACA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGGAGTAAACAAAAAGTaGACCAAATCTGCAGCACTA +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCGVNKK*TKSAAL
Trigger: TAGTGCTGCAGATTTGGTTCACTTTTTGTTTACTCC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTCAGTTCATCCTTATTaGGAGAGAAAAGTTGTGCAC +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCSVHPY*ERKVVH
Trigger: GTGCACAACTTTTCTCTCTCAATAAGGATGAACTGA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGGTTGCTTTGTTGCAGTaGATAACTCCACCACTATCA +
Preference number: 4 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVVALLQ*ITPPLS
Trigger: TGATAGTGGTGGAGTTATTCACTGCAACAAAGCAAC...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
CDS-3UTR TCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTGTTGCTTTGTTGCAGTaGATAACTCCACCACTATCA +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTVALLQ*ITPPLS
Trigger: TGATAGTGGTGGAGTTATTCACTGCAACAAAGCAAC...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCAATCAACAGAGCCATaGCAAACTCTCTTGAGAATG +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTQSTEP*QTLLRM
Trigger: CATTCTCAAGAGAGTTTGTCATGGCTCTGTTGATTG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGGATTTTGAGAAGACATaGCCTCTTTCGCATTTGTGC +
Preference number: 4 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVDFEKT*PLSHLC
Trigger: GCACAAATGCGAAAGAGGTCATGTCTTCTCAAAATC...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
CDS-3UTR TCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTGATTTTGAGAAGACATaGCCTCTTTCGCATTTGTGC +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTDFEKT*PLSHLC
Trigger: GCACAAATGCGAAAGAGGTCATGTCTTCTCAAAATC...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp CTTCAGTTTGGCCAGAAGGTTAAATCCGTGTTTAAACTTTTGGAAACAGTCAAGTCCTTTGCTAGATTTTaGGAAGACATGACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LQFGQKVKSVFKLLETVKSFARF*EDMTSF
Trigger: GAAAGAGGTCATGTCTTCTCAAAATCTAGCAAAGGA...CTTGACTGTTTCCAAAAGTTTAAACACGGATTTAACCTTCTGGCCAAACTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR TCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTCCTTTGCTAGATTTTaGGAAGACATGACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCSFARF*EDMTSF
Trigger: GAAAGAGGTCATGTCTTCTCAAAATCTAGCAAAGGA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCTTCTAAGTCGTAAGTaGATGAACGAGAGTACTAAG +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCLLSRK*MNESTK
Trigger: CTTAGTACTCTCGTTCATTCACTTACGACTTAGAAG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646918.1
ENST00000647087.1
CDS-3UTR GCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTATCACAGCTTGGCAGTaGTGGATTGTGTTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTITAWQ*WIVFKG
Trigger: TCCTTTAAACACAATCCAGCACTGCCAAGCTGTGAT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp AATATGAGACTTCAGTTTGGCCAGAAGGTTAAATCCGTGTTTAAACTTTTGGAACGGTATACTAGGGTCTaGATTGGAAATCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: NMRLQFGQKVKSVFKLLERYTRV*IGNHPQ
Trigger: CTGAGGATGATTTCCAATGCAGACCCTAGTATACCG...TTCCAAAAGTTTAAACACGGATTTAACCTTCTGGCCAAACTGAAGTCTCATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546261.1
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCAGAAAGCTCAGAAAATaGTTCTGCTGCTTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCRKLRK*FCCFLE
Trigger: CTCCAAAAAGCAGCAGAAGCATTTTCTGAGCTTTCT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCAAAAGTGAACCAAATCTaGAGCACTAGGATTCTGAAT +
Preference number: 4 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKAKVNQI*STRILN
Trigger: ATTCAGAATCCTAGTGCTGCAGATTTGGTTCACTTT...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR GCA 90 bp AATATGAGACTTCAGTTTGGCCAGAAGGTTAAATCCGTGTTTAAACTTTTGGAAAATGACATCCACAGCTaGCGTTCATCACCATTGACA +
Preference number: 4 (lower is better)
Translates to: NMRLQFGQKVKSVFKLLENDIHS*RSSPLT
Trigger: TGTCAATGGTGATGAACGGCAGCTGTGGATGTCATT...TTCCAAAAGTTTAAACACGGATTTAACCTTCTGGCCAAACTGAAGTCTCATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR GCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTTTGCGCTGATGTTCTaGTACATTTGCCACAGATTC +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTFALMF*YICHRF
Trigger: GAATCTGTGGCAAATGTAGCAGAACATCAGCGCAAA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCGAACTTTCCACCATTaGTTCCGATCATCAAGTATC +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTRTFHH*FRSSSI
Trigger: GATACTTGATGATCGGAAGCAATGGTGGAAAGTTCG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGCACTGTCACTGGAGCTaGTGTTTTGACGTGTTATAT +
Preference number: 4 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVHCHWS*CFDVLY
Trigger: ATATAACACGTCAAAACAGCAGCTCCAGTGACAGTG...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
CDS-3UTR GCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCACTGTCACTGGAGCTaGTGTTTTGACGTGTTATAT +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTHCHWS*CFDVLY
Trigger: ATATAACACGTCAAAACAGCAGCTCCAGTGACAGTG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCACTGCTATCCTCCAATaGAGCTTTTTGTACAGTGAT +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCTAILQ*SFLYSD
Trigger: ATCACTGTACAAAAAGCTGCATTGGAGGATAGCAGT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTAGCTATACAAGGAGTTaGAATCAACAGAGCCATGAC +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTSYTRS*NQQSHD
Trigger: GTCATGGCTCTGTTGATTGCAACTCCTTGTATAGCT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTGTAATGCACACCAATaGAGACTACTTCCTTTGCTA +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCCNAHQ*RLLPLL
Trigger: TAGCAAAGGAAGTAGTCTGCATTGGTGTGCATTACA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTTTATGCTCCCATACTaGCTCAAGTTGCTTCTAAGT +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCFMLPY*LKLLLS
Trigger: ACTTAGAAGCAACTTGAGGCAGTATGGGAGCATAAA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646918.1
ENST00000647087.1
CDS-3UTR GCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTTCACTTGTGTGTTCTaGTTTCCCATTTGCTCCACA +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTFTCVF*FPICST
Trigger: TGTGGAGCAAATGGGAAAGCAGAACACACAAGTGAA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647087.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGCCATTCATCTGAGATaGGTACATTCCAAAACTACT +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCAIHLR*VHSKTT
Trigger: AGTAGTTTTGGAATGTACCCATCTCAGATGAATGGC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp CTTCAGTTTGGCCAGAAGGTTAAATCCGTGTTTAAACTTTTGGAAACAGTCAAGTCCACACTTTGCCCTTaGCATCAAGCAATTTCAATT +
Preference number: 4 (lower is better)
Translates to: LQFGQKVKSVFKLLETVKSTLCP*HQAISI
Trigger: AATTGAAATTGCTTGATGCCAAGGGCAAAGTGTGGA...CTTGACTGTTTCCAAAAGTTTAAACACGGATTTAACCTTCTGGCCAAACTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTCCACACTTTGCCCTTaGCATCAAGCAATTTCAATT +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCSTLCP*HQAISI
Trigger: AATTGAAATTGCTTGATGCCAAGGGCAAAGTGTGGA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCACAGCTTGGCAGTGCTaGATTGTGTTTAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCTAWQC*IVFKGK
Trigger: TTTTCCTTTAAACACAATCCAGCACTGCCAAGCTGT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCAATAAACTGTTCTTTTaGCCACTCTGCTCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCNKLFF*PLCSGF
Trigger: AAAGCCAGAGCAGAGTGGCCAAAAGAACAGTTTATT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGATACTCTGATACACTaGAATGCTCTGTGGATAATC +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCDTLIH*NALWII
Trigger: GATTATCCACAGAGCATTCCAGTGTATCAGAGTATC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTATGGCGATTAGAAGTTaGCTTAAAAGCAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTMAIRS*LKSNSS
Trigger: GCTGCTGTTGCTTTTAAGCCAACTTCTAATCGCCAT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp AAGGTTAAATCCGTGTTTAAACTTTTGGAAACAGTCAAGAAATTCATCAGGAGGCCCCAATCCAGATTCTaGAGGTCTCACAATATCCAA +
Preference number: 4 (lower is better)
Translates to: KVKSVFKLLETVKKFIRRPQSRF*RSHNIQ
Trigger: TTGGATATTGTGAGACCTCCAGAATCTGGATTGGGG...CCTCCTGATGAATTTCTTGACTGTTTCCAAAAGTTTAAACACGGATTTAACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTGCATGTCCAAGGTATaGCTGTACTTTACAGTTCAT +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCCMSKV*LYFTVH
Trigger: ATGAACTGTAAAGTACAGCCATACCTTGGACATGCA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
3UTR CAA 72 bp TCACTGTTGTTCCTTGCTACAAAGTCATACTTGGATTaGGCATATTTCTTGGGTTGTGTTTTGAGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: SLLFLATKSYLD*AYFLGCVLSGS
Trigger: TGAACCACTCAAAACACAACCCAAGAAATATGCCAAATCCAAGTATGACTTTGTAGCAAGGAACAACAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR CAA 72 bp TATCATCCTTTAGAACCGAGAGCTCACTGTTGTTCCTaGCTACAAAGTCATACTTGGATTTGGCATATTTCT +
Preference number: 4 (lower is better)
Translates to: YHPLEPRAHCCS*LQSHTWIWHIS
Trigger: AGAAATATGCCAAATCCAAGTATGACTTTGTAGCAAGGAACAACAGTGAGCTCTCGGTTCTAAAGGATGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
3UTR CAA 72 bp TCTAAAATATCATCCTTTAGAACCGAGAGCTCACTGTaGTTCCTTGCTACAAAGTCATACTTGGATTTGGCA +
Preference number: 4 (lower is better)
Translates to: SKISSFRTESSL*FLATKSYLDLA
Trigger: TGCCAAATCCAAGTATGACTTTGTAGCAAGGAACAACAGTGAGCTCTCGGTTCTAAAGGATGATATTTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR TCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTGTTCAACACGGTATTaGGATATATCTGACACACTG +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTCSTRY*DISDTL
Trigger: CAGTGTGTCAGATATATCTCAATACCGTGTTGAACA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTGGAGTAAACAAAAAGTaGACCAAATCTGCAGCACTA +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTGVNKK*TKSAAL
Trigger: TAGTGCTGCAGATTTGGTTCACTTTTTGTTTACTCC...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTCAGTTCATCCTTATTaGGAGAGAAAAGTTGTGCAC +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTSVHPY*ERKVVH
Trigger: GTGCACAACTTTTCTCTCTCAATAAGGATGAACTGA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR TCA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGTCCTTTGCTAGATTTTaGGAAGACATGACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVSFARF*EDMTSF
Trigger: GAAAGAGGTCATGTCTTCTCAAAATCTAGCAAAGGA...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
CDS-3UTR TCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTAAGACCGTAAGTGAATaGACGAGAGTACTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTKTVSE*TRVLRK
Trigger: TTTCCTTAGTACTCTCGTTCATTCACTTACGGTCTT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646828.1
CDS-3UTR GCA 90 bp AATTTCAATTTCCTTATTCCATCATCAACAGTGATCATAGCATCTTTCCGATCCATCACAGCTTGGCAGTaGTGGATTGTGTTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: NFNFLIPSSTVIIASFRSITAWQ*WIVFKG
Trigger: TCCTTTAAACACAATCCAGCACTGCCAAGCTGTGAT...GGATCGGAAAGATGCTATGATCACTGTTGATGATGGAATAAGGAAATTGAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536956.5
CDS-3UTR GCA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAGAAAGCTCAGAAAATaGTTCTGCTGCTTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVRKLRK*FCCFLE
Trigger: CTCCAAAAAGCAGCAGAAGCATTTTCTGAGCTTTCT...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
CDS-3UTR GCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTAGAAAGCTCAGAAAATaGTTCTGCTGCTTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTRKLRK*FCCFLE
Trigger: CTCCAAAAAGCAGCAGAAGCATTTTCTGAGCTTTCT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCAAAGTGAACCAAATCTaGAGCACTAGGATTCTGAAT +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCKVNQI*STRILN
Trigger: ATTCAGAATCCTAGTGCTGCAGATTTGGTTCACTTT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCATTTGCCACAGATTCTaGCAGTTGATAAAGATCTTG +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCICHRF*QLIKIL
Trigger: CAAGATCTTTATCAACTGGCAGAATCTGTGGCAAAT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTACTGCTATCCTCCAATaGAGCTTTTTGTACAGTGAT +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTTAILQ*SFLYSD
Trigger: ATCACTGTACAAAAAGCTGCATTGGAGGATAGCAGT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTGTAATGCACACCAATaGAGACTACTTCCTTTGCTA +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTCNAHQ*RLLPLL
Trigger: TAGCAAAGGAAGTAGTCTGCATTGGTGTGCATTACA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTGCCATTCATCTGAGATaGGTACATTCCAAAACTACT +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTAIHLR*VHSKTT
Trigger: AGTAGTTTTGGAATGTACCCATCTCAGATGAATGGC...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp CTTGGCATCAAGCAATTTCAATTTCCTTATTCCATCATCAACAGTGATCATAGCTCCACACTTTGCCCTTaGCATCAAGCAATTTCAATT +
Preference number: 4 (lower is better)
Translates to: LGIKQFQFPYSIINSDHSSTLCP*HQAISI
Trigger: AATTGAAATTGCTTGATGCCAAGGGCAAAGTGTGGA...GCTATGATCACTGTTGATGATGGAATAAGGAAATTGAAATTGCTTGATGCCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536956.5
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTCCACACTTTGCCCTTaGCATCAAGCAATTTCAATT +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTSTLCP*HQAISI
Trigger: AATTGAAATTGCTTGATGCCAAGGGCAAAGTGTGGA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAATAAACTGTTCTTTTaGCCACTCTGCTCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVNKLFF*PLCSGF
Trigger: AAAGCCAGAGCAGAGTGGCCAAAAGAACAGTTTATT...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTAATAAACTGTTCTTTTaGCCACTCTGCTCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTNKLFF*PLCSGF
Trigger: AAAGCCAGAGCAGAGTGGCCAAAAGAACAGTTTATT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGGATACTCTGATACACTaGAATGCTCTGTGGATAATC +
Preference number: 4 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVDTLIH*NALWII
Trigger: GATTATCCACAGAGCATTCCAGTGTATCAGAGTATC...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTGATACTCTGATACACTaGAATGCTCTGTGGATAATC +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTDTLIH*NALWII
Trigger: GATTATCCACAGAGCATTCCAGTGTATCAGAGTATC...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp CTTCAGTTTGGCCAGAAGGTTAAATCCGTGTTTAAACTTTTGGAAACAGTCAAGAGTCATACTTGGATTTaGCATATTTCTTGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: LQFGQKVKSVFKLLETVKSHTWI*HISWVV
Trigger: CACAACCCAAGAAATATGCCAAATCCAAGTATGACT...CTTGACTGTTTCCAAAAGTTTAAACACGGATTTAACCTTCTGGCCAAACTGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCAGTCATACTTGGATTTaGCATATTTCTTGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCSHTWI*HISWVV
Trigger: CACAACCCAAGAAATATGCCAAATCCAAGTATGACT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCATCCAAAATGTTATTTaGCACAAATCCAGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCIQNVI*HKSRVS
Trigger: GGAGACTCTGGATTTGTGCCAAATAACATTTTGGAT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCATTCCTGTTTATACCCTaGGATGGGGATAAAATAATT +
Preference number: 4 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKAFLFIP*DGDKII
Trigger: AATTATTTTATCCCCATCCCAGGGTATAAACAGGAA...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
3UTR CAA 72 bp TTTTTATTTCCTGTTTGCGCTGATGTTCTGCTACATTaGCCACAGATTCTGCCAGTTGATAAAGATCTTGTT +
Preference number: 4 (lower is better)
Translates to: FLFPVCADVLLH*PQILPVDKDLV
Trigger: AACAAGATCTTTATCAACTGGCAGAATCTGTGGCAAATGTAGCAGAACATCAGCGCAAACAGGAAATAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR GCA 90 bp CAGTTTGGCCAGAAGGTTAAATCCGTGTTTAAACTTTTGGAAACAGTCAAGAAAAAAGTGAACCAAATCTaGAGCACTAGGATTCTGAAT +
Preference number: 4 (lower is better)
Translates to: QFGQKVKSVFKLLETVKKKVNQI*STRILN
Trigger: ATTCAGAATCCTAGTGCTGCAGATTTGGTTCACTTT...TTTCTTGACTGTTTCCAAAAGTTTAAACACGGATTTAACCTTCTGGCCAAACTG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000543468.5
ENST00000546261.1
CDS-3UTR GCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTATTTGCCACAGATTCTaGCAGTTGATAAAGATCTTG +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTICHRF*QLIKIL
Trigger: CAAGATCTTTATCAACTGGCAGAATCTGTGGCAAAT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTCTGATACACTGGAATaGTCTGTGGATAATCTTTTT +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCSDTLE*SVDNLF
Trigger: AAAAAGATTATCCACAGAGCATTCCAGTGTATCAGA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCCTCTTTCGCATTTGTaGTTTCTCATATATAAGAAC +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCPLSHL*FLIYKN
Trigger: GTTCTTATATATGAGAAAGCACAAATGCGAAAGAGG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTGTCAAATGCACAAATaGACATGGACACATCCTTTT +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTCQMHK*TWTHPF
Trigger: AAAAGGATGTGTCCATGTGCATTTGTGCATTTGACA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642278.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCACTGGAATGCTCTGTaGATAATCTTTTTATTTCCT +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCHWNAL*IIFLFP
Trigger: AGGAAATAAAAAGATTATCCACAGAGCATTCCAGTG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTAGTCATACTTGGATTTaGCATATTTCTTGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTSHTWI*HISWVV
Trigger: CACAACCCAAGAAATATGCCAAATCCAAGTATGACT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTATCCAAAATGTTATTTaGCACAAATCCAGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTIQNVI*HKSRVS
Trigger: GGAGACTCTGGATTTGTGCCAAATAACATTTTGGAT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTTCCTGTTTATACCCTaGGATGGGGATAAAATAATT +
Preference number: 4 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCFLFIP*DGDKII
Trigger: AATTATTTTATCCCCATCCCAGGGTATAAACAGGAA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp AATATGAGACTTCAGTTTGGCCAGAAGGTTAAATCCGTGTTTAAACTTTTGGAAATTTGCCACAGATTCTaGCAGTTGATAAAGATCTTG +
Preference number: 4 (lower is better)
Translates to: NMRLQFGQKVKSVFKLLEICHRF*QLIKIL
Trigger: CAAGATCTTTATCAACTGGCAGAATCTGTGGCAAAT...TTCCAAAAGTTTAAACACGGATTTAACCTTCTGGCCAAACTGAAGTCTCATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR GCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTCTGATACACTGGAATaGTCTGTGGATAATCTTTTT +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTSDTLE*SVDNLF
Trigger: AAAAAGATTATCCACAGAGCATTCCAGTGTATCAGA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR GCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCCTCTTTCGCATTTGTaGTTTCTCATATATAAGAAC +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTPLSHL*FLIYKN
Trigger: GTTCTTATATATGAGAAAGCACAAATGCGAAAGAGG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCACTGGAATGCTCTGTaGATAATCTTTTTATTTCCT +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTHWNAL*IIFLFP
Trigger: AGGAAATAAAAAGATTATCCACAGAGCATTCCAGTG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CCA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTTCCTGTTTATACCCTaGGATGGGGATAAAATAATT +
Preference number: 4 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTFLFIP*DGDKII
Trigger: AATTATTTTATCCCCATCCCAGGGTATAAACAGGAA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
3UTR CAA 72 bp AGAAACCATTTATTAACAGACAGCAAATACTGTTTATaGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: RNHLLTDSKYCL*QTFQLTHVKKA
Trigger: TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAAATGGTTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000281172.10
CDS CCA 90 bp GCTGCCCATGCAGACCAGGCTGCCACTCGACTTCTAACATCCACCTaGGTGACGGTCCCAGGGGGCGCAGGGGCAGGAGCTCTGGGTGGA +
Preference number: 5 (lower is better)
Translates to: AAHADQAATRLLTST*VTVPGGAGAGALGG
Trigger: TCCACCCAGAGCTCCTGCCCCTGCGCCCCCTGGGACCGTCACCCAGGTGGATGTTAGAAGTCGAGTGGCAGCCTGGTCTGCATGGGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000281172.10
ENST00000508018.2
ENST00000543523.5
ENST00000543612.5
ENST00000546261.1
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS GCA 90 bp GGAAGACTCACAGTCCCCTTGGTCGGCTGCCCATGCAGACCAGGCTaGCACTCGACTTCTAACATCCACCTGGGTGACGGTCCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: GRLTVPLVGCPCRPG*HSTSNIHLGDGPRG
Trigger: CCCCCTGGGACCGTCACCCAGGTGGATGTTAGAAGTCGAGTGGCAGCCTGGTCTGCATGGGCAGCCGACCAAGGGGACTGTGAGTCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508018.2
CDS GCA 90 bp TGGTTTCTCAAAGTCCCCTTGGTCGGCTGCCCATGCAGACCAGGCTaGCACTCGACTTCTAACATCCACCTGGGTGACGGTCCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: WFLKVPLVGCPCRPG*HSTSNIHLGDGPRG
Trigger: CCCCCTGGGACCGTCACCCAGGTGGATGTTAGAAGTCGAGTGGCAGCCTGGTCTGCATGGGCAGCCGACCAAGGGGACTTTGAGAAACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS GCA 90 bp AAAAAGGGACTAGTCCCCTTGGTCGGCTGCCCATGCAGACCAGGCTaGCACTCGACTTCTAACATCCACCTGGGTGACGGTCCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: KKGLVPLVGCPCRPG*HSTSNIHLGDGPRG
Trigger: CCCCCTGGGACCGTCACCCAGGTGGATGTTAGAAGTCGAGTGGCAGCCTGGTCTGCATGGGCAGCCGACCAAGGGGACTAGTCCCTTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546261.1
CDS CCA 90 bp TCCTCAGTAGGGCTGCTCGGCAGGTACACAGCTGACGCTGGTCCTTaGACTTATGGGAGTGGGAACAACTTTCAACTCGGCCGCGGACCA +
Preference number: 5 (lower is better)
Translates to: SSVGLLGRYTADAGP*TYGSGNNFQLGRGP
Trigger: TGGTCCGCGGCCGAGTTGAAAGTTGTTCCCACTCCCATAAGTCCAAGGACCAGCGTCAGCTGTGTACCTGCCGAGCAGCCCTACTGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646918.1
CDS TCA 90 bp AGGCCGAGCACAGTCCTCAGTAGGGCTGCTCGGCAGGTACACAGCTaGCGCTGGTCCTTGGACTTATGGGAGTGGGAACAACTTTCAACT +
Preference number: 5 (lower is better)
Translates to: RPSTVLSRAARQVHS*RWSLDLWEWEQLST
Trigger: AGTTGAAAGTTGTTCCCACTCCCATAAGTCCAAGGACCAGCGTCAGCTGTGTACCTGCCGAGCAGCCCTACTGAGGACTGTGCTCGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646918.1
CDS-3UTR CAA 90 bp GTTGTTTGTGTCTCTGGCTGTCTCGCACGATACTGCCACCACTGTCACTGGAGCGGGGGCTCCCAGCCATaGCGGAATCGTGGAACATAT +
Preference number: 5 (lower is better)
Translates to: VVCVSGCLARYCHHCHWSGGSQP*RNRGTY
Trigger: ATATGTTCCACGATTCCGCAATGGCTGGGAGCCCCC...GCTCCAGTGACAGTGGTGGCAGTATCGTGCGAGACAGCCAGAGACACAAACAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp GATAACTGGCACGTTCTGCCGTGGCACATGGAATTTCTTCTGAGCGGCACTCCGAACAGCAGCTTCCCCTaGGTCCAGGTGGGATCCTCT +
Preference number: 5 (lower is better)
Translates to: DNWHVLPWHMEFLLSGTPNSSFP*VQVGSS
Trigger: AGAGGATCCCACCTGGACCAAGGGGAAGCTGCTGTT...CGGAGTGCCGCTCAGAAGAAATTCCATGTGCCACGGCAGAACGTGCCAGTTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS TCA 90 bp CTGTCAATGCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCATaGTACTGCCTTGGTTTCTCAACTCAGGGCGTCGGGCCGCCTCTT +
Preference number: 5 (lower is better)
Translates to: LSMRAAIISGVSSCS*YCLGFSTQGVGPPL
Trigger: AAGAGGCGGCCCGACGCCCTGAGTTGAGAAACCAAGGCAGTATCATGAGCAGGAAGAAACACCTGAGATGATGGCAGCCCGCATTGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS GCA 90 bp ATGATACTGCCTTGGTTTCTCAAAGTCCCCTTGGTCGGCTGCCCATaGAGACCAGGCTGCCACTCGACTTCTAACATCCACCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: MILPWFLKVPLVGCP*RPGCHSTSNIHLGD
Trigger: GTCACCCAGGTGGATGTTAGAAGTCGAGTGGCAGCCTGGTCTGCATGGGCAGCCGACCAAGGGGACTTTGAGAAACCAAGGCAGTATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS GCA 90 bp ACAAACTTGTCCAAAAAGGGACTAGTCCCCTTGGTCGGCTGCCCATaGAGACCAGGCTGCCACTCGACTTCTAACATCCACCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: TNLSKKGLVPLVGCP*RPGCHSTSNIHLGD
Trigger: GTCACCCAGGTGGATGTTAGAAGTCGAGTGGCAGCCTGGTCTGCATGGGCAGCCGACCAAGGGGACTAGTCCCTTTTTGGACAAGTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546261.1
CDS TCA 90 bp GTGTGTTGGGAATTCCAGGTACAGAAATATGGCCAACTGAGCTCATaGAGACTTCCCACTACAGACACTCGGATCCGCCCTCGGGGCCAC +
Preference number: 5 (lower is better)
Translates to: VCWEFQVQKYGQLSS*RLPTTDTRIRPRGH
Trigger: GTGGCCCCGAGGGCGGATCCGAGTGTCTGTAGTGGGAAGTCTTCATGAGCTCAGTTGGCCATATTTCTGTACCTGGAATTCCCAACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642939.1
ENST00000645775.1
CDS GCA 90 bp GTATTAATTCTAGGAAGACTCACAGTCCCCTTGGTCGGCTGCCCATaGAGACCAGGCTGCCACTCGACTTCTAACATCCACCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: VLILGRLTVPLVGCP*RPGCHSTSNIHLGD
Trigger: GTCACCCAGGTGGATGTTAGAAGTCGAGTGGCAGCCTGGTCTGCATGGGCAGCCGACCAAGGGGACTGTGAGTCTTCCTAGAATTAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508018.2
CDS-3UTR CAA 90 bp AATTCATCAGGAGGTGGAGGTTTTGCCCGCAGCGTTAAAACACCCTCTCCTGGTCAGGAGGTGGAGGTTTaGCCCGCAGCGTTAAAACAC +
Preference number: 5 (lower is better)
Translates to: NSSGGGGFARSVKTPSPGQEVEV*PAALKH
Trigger: GTGTTTTAACGCTGCGGGCAAAACCTCCACCTCCTG...ACCAGGAGAGGGTGTTTTAACGCTGCGGGCAAAACCTCCACCTCCTGATGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000543468.5
ENST00000546261.1
CDS-3UTR CAA 90 bp ATCTCTGTCAATGCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCATGATAAAGGGACTAGTCCCCTaGGTCGGCTGCCCATGCAGA +
Preference number: 5 (lower is better)
Translates to: ISVNAGCHHLRCFFLLMIKGLVP*VGCPCR
Trigger: TCTGCATGGGCAGCCGACCAAGGGGACTAGTCCCTT...TATCATGAGCAGGAAGAAACACCTGAGATGATGGCAGCCCGCATTGACAGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546261.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTGGGGGCTCCCAGCCATaGCGGAATCGTGGAACATAT +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPGGSQP*RNRGTY
Trigger: ATATGTTCCACGATTCCGCAATGGCTGGGAGCCCCC...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCATGATACTGCCTTGGTTTCATTGTGTCTTTCACTaGTGTGTTCTCGGATCCGCC +
Preference number: 5 (lower is better)
Translates to: AGCHHLRCFFLLMILPWFHCVFH*CVLGSA
Trigger: GGCGGATCCGAGAACACACAAGTGAAAGACACAATG...AAACCAAGGCAGTATCATGAGCAGGAAGAAACACCTGAGATGATGGCAGCCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTTTCTCAAAGTCCCCTaGGTCGGCTGCCCATGCAGA +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPFLKVP*VGCPCR
Trigger: TCTGCATGGGCAGCCGACCAAGGGGACTTTGAGAAA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTCAGGAGGTGGAGGTTTaGCCCGCAGCGTTAAAACAC +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPQEVEV*PAALKH
Trigger: GTGTTTTAACGCTGCGGGCAAAACCTCCACCTCCTG...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp ATCTCTGTCAATGCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCATGATACAGGAGGTGGAGGTTTaGCCCGCAGCGTTAAAACAC +
Preference number: 5 (lower is better)
Translates to: ISVNAGCHHLRCFFLLMIQEVEV*PAALKH
Trigger: GTGTTTTAACGCTGCGGGCAAAACCTCCACCTCCTG...TATCATGAGCAGGAAGAAACACCTGAGATGATGGCAGCCCGCATTGACAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543468.5
ENST00000546261.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCGGGGGCTCCCAGCCATaGCGGAATCGTGGAACATAT +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCGGSQP*RNRGTY
Trigger: ATATGTTCCACGATTCCGCAATGGCTGGGAGCCCCC...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACAGCAGCTTCCCCTaGGTCCAGGTGGGATCCTCT +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRNSSFP*VQVGSS
Trigger: AGAGGATCCCACCTGGACCAAGGGGAAGCTGCTGTT...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCAACAGCAGCTTCCCCTaGGTCCAGGTGGGATCCTCT +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCNSSFP*VQVGSS
Trigger: AGAGGATCCCACCTGGACCAAGGGGAAGCTGCTGTT...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTCCACCGGAAGTTGTTaGTGTCTCTGGCTGTCTCGC +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPSTGSC*CLWLSR
Trigger: GCGAGACAGCCAGAGACACAAACAACTTCCGGTGGA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTCGGTCCACCGGAAGTaGTTTGTGTCTCTGGCTGTC +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPSVHRK*FVSLAV
Trigger: GACAGCCAGAGACACAAACAACTTCCGGTGGACCGA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS TCA 90 bp CTGTCAATGCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCATaGTACTGCCTTGGTTTCTCAACATTTGCCAAAGGGAACACCTCC +
Preference number: 5 (lower is better)
Translates to: LSMRAAIISGVSSCS*YCLGFSTFAKGNTS
Trigger: GGAGGTGTTCCCTTTGGCAAATGTTGAGAAACCAAGGCAGTATCATGAGCAGGAAGAAACACCTGAGATGATGGCAGCCCGCATTGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542903.1
CDS TCA 90 bp TGGCCAACTGAGCTCATGAAGACTTCCCACTACAGACAATTAGGCTaGACAGAAGCTAAGGACAGCACCTTGGCAGGATCCTCATTGTCC +
Preference number: 5 (lower is better)
Translates to: WPTELMKTSHYRQLG*TEAKDSTLAGSSLS
Trigger: GGACAATGAGGATCCTGCCAAGGTGCTGTCCTTAGCTTCTGTTCAGCCTAATTGTCTGTAGTGGGAAGTCTTCATGAGCTCAGTTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646828.1
CDS CCA 90 bp TTGAGAGGCCATTCCACTCAGTTTACTTATGTGCCAAGTGACCTTTaGCACAACGTCAGAAAGGGTGGGACTCTAAGCGTCAGTTTCGGC +
Preference number: 5 (lower is better)
Translates to: LRGHSTQFTYVPSDL*HNVRKGGTLSVSFG
Trigger: GCCGAAACTGACGCTTAGAGTCCCACCCTTTCTGACGTTGTGCCAAAGGTCACTTGGCACATAAGTAAACTGAGTGGAATGGCCTCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543612.5
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACTGGCTTGTTCTGGGTaGGCTCTTTGCACACCAGTG +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRLACSG*ALCTPV
Trigger: CACTGGTGTGCAAAGAGCCAACCCAGAACAAGCCAG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCCTGGCTTGTTCTGGGTaGGCTCTTTGCACACCAGTG +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCLACSG*ALCTPV
Trigger: CACTGGTGTGCAAAGAGCCAACCCAGAACAAGCCAG...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATTTCTCAAAGTCCCCTaGGTCGGCTGCCCATGCAGA +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRFLKVP*VGCPCR
Trigger: TCTGCATGGGCAGCCGACCAAGGGGACTTTGAGAAA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTTTCTCAAAGTCCCCTaGGTCGGCTGCCCATGCAGA +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCFLKVP*VGCPCR
Trigger: TCTGCATGGGCAGCCGACCAAGGGGACTTTGAGAAA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCCAGGAGGTGGAGGTTTaGCCCGCAGCGTTAAAACAC +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCQEVEV*PAALKH
Trigger: GTGTTTTAACGCTGCGGGCAAAACCTCCACCTCCTG...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACAGGAGGTGGAGGTTTaGCCCGCAGCGTTAAAACAC +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRQEVEV*PAALKH
Trigger: GTGTTTTAACGCTGCGGGCAAAACCTCCACCTCCTG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CACATCTCTGTCAATGCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCATGATCCAGAGTCTCCACTaGCATTTCGAACTTTCCACC +
Preference number: 5 (lower is better)
Translates to: HISVNAGCHHLRCFFLLMIQSLH*HFELST
Trigger: GGTGGAAAGTTCGAAATGCAAGTGGAGACTCTGGAT...CATGAGCAGGAAGAAACACCTGAGATGATGGCAGCCCGCATTGACAGAGATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTCCACCGGAAGTTGTTaGTGTCTCTGGCTGTCTCGC +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCSTGSC*CLWLSR
Trigger: GCGAGACAGCCAGAGACACAAACAACTTCCGGTGGA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATCCACCGGAAGTTGTTaGTGTCTCTGGCTGTCTCGC +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRSTGSC*CLWLSR
Trigger: GCGAGACAGCCAGAGACACAAACAACTTCCGGTGGA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATCGGTCCACCGGAAGTaGTTTGTGTCTCTGGCTGTC +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRSVHRK*FVSLAV
Trigger: GACAGCCAGAGACACAAACAACTTCCGGTGGACCGA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTCGGTCCACCGGAAGTaGTTTGTGTCTCTGGCTGTC +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCSVHRK*FVSLAV
Trigger: GACAGCCAGAGACACAAACAACTTCCGGTGGACCGA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCGCTAAGGACAGCACCTaGGCAGGATCCTCATTGTCC +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCAKDST*AGSSLS
Trigger: GGACAATGAGGATCCTGCCAAGGTGCTGTCCTTAGC...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646828.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTTCTGGGTTGGCTCTTaGCACACCAGTGCAAGAACT +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPFWVGS*HTSART
Trigger: AGTTCTTGCACTGGTGTGCAAAGAGCCAACCCAGAA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTATACTAGGGTCTGCATaGGAAATCATCCTCAGGGCG +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPILGSA*EIILRA
Trigger: CGCCCTGAGGATGATTTCCAATGCAGACCCTAGTAT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTGTTCAGGACCTCCTGTaGCCTGCACCACCATATTTA +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPVQDLL*PAPPYL
Trigger: TAAATATGGTGGTGCAGGCAACAGGAGGTCCTGAAC...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GATAACTGGCACGTTCTGCCGTGGCACATGGAATTTCTTCTGAGCGGCACTCCGGCCATACTCCATCCTTaGTTTCTGTATAGTATGAGT +
Preference number: 5 (lower is better)
Translates to: DNWHVLPWHMEFLLSGTPAILHP*FLYSMS
Trigger: ACTCATACTATACAGAAACAAAGGATGGAGTATGGC...CGGAGTGCCGCTCAGAAGAAATTCCATGTGCCACGGCAGAACGTGCCAGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTGAGTATCAGCTGGTCTaGGGCCATACTCCATCCTTT +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPEYQLV*GHTPSF
Trigger: AAAGGATGGAGTATGGCCCAAGACCAGCTGATACTC...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTATTTGCTGGGACCTTaGACACAGGAACAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPYLLGP*TQEQVL
Trigger: CAGCACCTGTTCCTGTGTCAAAGGTCCCAGCAAATA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TGCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCATGATACTGCCTTGGTTACTGGAGCTGCTGTTTaGACGTGTTATATTTGCTGG +
Preference number: 5 (lower is better)
Translates to: CGLPSSQVFLPAHDTALVTGAAV*TCYICW
Trigger: CCAGCAAATATAACACGTCAAAACAGCAGCTCCAGT...AACCAAGGCAGTATCATGAGCAGGAAGAAACACCTGAGATGATGGCAGCCCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp AAACAGTCAAGAAATTCATCAGGAGGTGGAGGTTTTGCCCGCAGCGTTAAAACATCGGTCCACCGGAAGTaGTTTGTGTCTCTGGCTGTC +
Preference number: 5 (lower is better)
Translates to: KQSRNSSGGGGFARSVKTSVHRK*FVSLAV
Trigger: GACAGCCAGAGACACAAACAACTTCCGGTGGACCGA...TGTTTTAACGCTGCGGGCAAAACCTCCACCTCCTGATGAATTTCTTGACTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp TGGCTTTCATCCAAGTTCCTCCCAATGACATCCACAGCTGCCGTTCATCACCATGTGGATGAGTTCATCTaGCACTTCCTCCATCTGAGA +
Preference number: 5 (lower is better)
Translates to: WLSSKFLPMTSTAAVHHHVDEFI*HFLHLR
Trigger: TCTCAGATGGAGGAAGTGCAAGATGAACTCATCCAC...ATGGTGATGAACGGCAGCTGTGGATGTCATTGGGAGGAACTTGGATGAAAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp CAATGCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCATGATACTGCCTTGTTTTTGTACAGTGATTaGGCTATAGACTCTCGCCCC +
Preference number: 5 (lower is better)
Translates to: QCGLPSSQVFLPAHDTALFLYSD*AIDSRP
Trigger: GGGGCGAGAGTCTATAGCCAAATCACTGTACAAAAA...CAAGGCAGTATCATGAGCAGGAAGAAACACCTGAGATGATGGCAGCCCGCATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp GATAACTGGCACGTTCTGCCGTGGCACATGGAATTTCTTCTGAGCGGCACTCCGGAATCATGGACAACATaGTTGCTTTGTTGCAGTGAA +
Preference number: 5 (lower is better)
Translates to: DNWHVLPWHMEFLLSGTPESWTT*LLCCSE
Trigger: TTCACTGCAACAAAGCAACAATGTTGTCCATGATTC...CGGAGTGCCGCTCAGAAGAAATTCCATGTGCCACGGCAGAACGTGCCAGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp GATAACTGGCACGTTCTGCCGTGGCACATGGAATTTCTTCTGAGCGGCACTCCGAGCAAATACTGTTTATaGCAGACTTTCCAGCTGACT +
Preference number: 5 (lower is better)
Translates to: DNWHVLPWHMEFLLSGTPSKYCL*QTFQLT
Trigger: AGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCT...CGGAGTGCCGCTCAGAAGAAATTCCATGTGCCACGGCAGAACGTGCCAGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp TATATGGCGATTAGAAGTTGGCTTAAAAGCAACAGCAGCTTCCCCTTGGTCCAGGCTCATGATACTGCCTaGGTTTCTCAACTCAGGGCG +
Preference number: 5 (lower is better)
Translates to: YMAIRSWLKSNSSFPLVQAHDTA*VSQLRA
Trigger: CGCCCTGAGTTGAGAAACCAAGGCAGTATCATGAGC...CTGGACCAAGGGGAAGCTGCTGTTGCTTTTAAGCCAACTTCTAATCGCCATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS GCA 90 bp AGGAGTCAAGGAATGCAGGCAACCTCTAGAACCTGCTTTCCCATTTaGTCCACAGTTGTGGCTTTCACATACTGGAAGAGGTCCATGAAT +
Preference number: 5 (lower is better)
Translates to: RSQGMQATSRTCFPI*STVVAFTYWKRSMN
Trigger: ATTCATGGACCTCTTCCAGTATGTGAAAGCCACAACTGTGGAGCAAATGGGAAAGCAGGTTCTAGAGGTTGCCTGCATTCCTTGACTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646918.1
CDS CCA 90 bp GAATCTTTCCAACTTCTTAGACTCCTACTCACTGCTCGGAGACTTTaGCATCCTGGCTGTCTTTTATGCTCCCATACTGCCTCAAGTTGC +
Preference number: 5 (lower is better)
Translates to: ESFQLLRLLLTARRL*HPGCLLCSHTASSC
Trigger: GCAACTTGAGGCAGTATGGGAGCATAAAAGACAGCCAGGATGCCAAAGTCTCCGAGCAGTGAGTAGGAGTCTAAGAAGTTGGAAAGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646918.1
ENST00000647087.1
CDS-3UTR CAA 90 bp GGCTCACAGCTCTGTCATCCACTTGAAGAATCATATCTTGAGTCCACACTTTGCCATTGTGTCTTTCACTaGTGTGTTCTCGGATCCGCC +
Preference number: 5 (lower is better)
Translates to: GSQLCHPLEESYLESTLCHCVFH*CVLGSA
Trigger: GGCGGATCCGAGAACACACAAGTGAAAGACACAATG...GCAAAGTGTGGACTCAAGATATGATTCTTCAAGTGGATGACAGAGCTGTGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536956.5
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACATTGTGTCTTTCACTaGTGTGTTCTCGGATCCGCC +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRHCVFH*CVLGSA
Trigger: GGCGGATCCGAGAACACACAAGTGAAAGACACAATG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000644374.1
ENST00000646123.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCCATTGTGTCTTTCACTaGTGTGTTCTCGGATCCGCC +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCHCVFH*CVLGSA
Trigger: GGCGGATCCGAGAACACACAAGTGAAAGACACAATG...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000644374.1
ENST00000646123.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTTCTGGGTTGGCTCTTaGCACACCAGTGCAAGAACT +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCFWVGS*HTSART
Trigger: AGTTCTTGCACTGGTGTGCAAAGAGCCAACCCAGAA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATTCTGGGTTGGCTCTTaGCACACCAGTGCAAGAACT +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRFWVGS*HTSART
Trigger: AGTTCTTGCACTGGTGTGCAAAGAGCCAACCCAGAA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCATACTAGGGTCTGCATaGGAAATCATCCTCAGGGCG +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCILGSA*EIILRA
Trigger: CGCCCTGAGGATGATTTCCAATGCAGACCCTAGTAT...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAATACTAGGGTCTGCATaGGAAATCATCCTCAGGGCG +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRILGSA*EIILRA
Trigger: CGCCCTGAGGATGATTTCCAATGCAGACCCTAGTAT...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTGCTCATGATACTGCCTaGGTTTCTCAAAGTCCCCTT +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPAHDTA*VSQSPL
Trigger: AAGGGGACTTTGAGAAACCAAGGCAGTATCATGAGC...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCGTTCAGGACCTCCTGTaGCCTGCACCACCATATTTA +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCVQDLL*PAPPYL
Trigger: TAAATATGGTGGTGCAGGCAACAGGAGGTCCTGAAC...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp AATTCATCAGGAGGTGGAGGTTTTGCCCGCAGCGTTAAAACACCCTCTCCTGGTCAGTTGATAAAGATCTaGTTCCATTGTGGCTCCCAT +
Preference number: 5 (lower is better)
Translates to: NSSGGGGFARSVKTPSPGQLIKI*FHCGSH
Trigger: ATGGGAGCCACAATGGAACAAGATCTTTATCAACTG...ACCAGGAGAGGGTGTTTTAACGCTGCGGGCAAAACCTCCACCTCCTGATGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCAAACAGCAGCTTCCCCTaGGTCCAGGTGGGATCCTCT +
Preference number: 5 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKANSSFP*VQVGSS
Trigger: AGAGGATCCCACCTGGACCAAGGGGAAGCTGCTGTT...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CAA 90 bp ATTTGCACATCTCTGTCAATGCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCGCTCACTGTTGTTCCTaGCTACAAAGTCATACTTGG +
Preference number: 5 (lower is better)
Translates to: ICTSLSMRAAIISGVSSCAHCCS*LQSHTW
Trigger: CCAAGTATGACTTTGTAGCAAGGAACAACAGTGAGC...GCAGGAAGAAACACCTGAGATGATGGCAGCCCGCATTGACAGAGATGTGCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTACCGAGAGCTCACTGTaGTTCCTTGCTACAAAGTCA +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPTESSL*FLATKS
Trigger: TGACTTTGTAGCAAGGAACAACAGTGAGCTCTCGGT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CACATCTCTGTCAATGCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCATGTCGAACTTTCCACCATaGCTTCCGATCATCAAGTAT +
Preference number: 5 (lower is better)
Translates to: HISVNAGCHHLRCFFLLMSNFPP*LPIIKY
Trigger: ATACTTGATGATCGGAAGCAATGGTGGAAAGTTCGA...CATGAGCAGGAAGAAACACCTGAGATGATGGCAGCCCGCATTGACAGAGATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCGAGTATCAGCTGGTCTaGGGCCATACTCCATCCTTT +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCEYQLV*GHTPSF
Trigger: AAAGGATGGAGTATGGCCCAAGACCAGCTGATACTC...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAGAGTATCAGCTGGTCTaGGGCCATACTCCATCCTTT +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNREYQLV*GHTPSF
Trigger: AAAGGATGGAGTATGGCCCAAGACCAGCTGATACTC...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TGCTGTTTTGACGTGTTATATTTGCTGGGACCTTTGACACAGGAACAGGTGCTGTATTTGCTGGGACCTTaGACACAGGAACAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: CCFDVLYLLGPLTQEQVLYLLGP*TQEQVL
Trigger: CAGCACCTGTTCCTGTGTCAAAGGTCCCAGCAAATA...CAGCACCTGTTCCTGTGTCAAAGGTCCCAGCAAATATAACACGTCAAAACAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATATTTGCTGGGACCTTaGACACAGGAACAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRYLLGP*TQEQVL
Trigger: CAGCACCTGTTCCTGTGTCAAAGGTCCCAGCAAATA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTATTTGCTGGGACCTTaGACACAGGAACAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCYLLGP*TQEQVL
Trigger: CAGCACCTGTTCCTGTGTCAAAGGTCCCAGCAAATA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTGTGGATGAGTTCATCTaGCACTTCCTCCATCTGAGA +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPVDEFI*HFLHLR
Trigger: TCTCAGATGGAGGAAGTGCAAGATGAACTCATCCAC...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCACAGCGTTCGCTGGTTaGGGCCGTCACTGGGTATGG +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCTAFAG*GRHWVW
Trigger: CCATACCCAGTGACGGCCCAAACCAGCGAACGCTGT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646918.1
CDS GCA 90 bp GAAATATCTGGCTCTGAAGGTGATAGAGATTCAGGAGTCAAGGAATaGAGGCAACCTCTAGAACCTGCTTTCCCATTTGCTCCACAGTTG +
Preference number: 5 (lower is better)
Translates to: EISGSEGDRDSGVKE*RQPLEPAFPFAPQL
Trigger: CAACTGTGGAGCAAATGGGAAAGCAGGTTCTAGAGGTTGCCTGCATTCCTTGACTCCTGAATCTCTATCACCTTCAGAGCCAGATATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646918.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTCCTTTGCACTTGTTTTaGAACCATGTTCTCTGTCCG +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPPLHLF*NHVLCP
Trigger: CGGACAGAGAACATGGTTCAAAAACAAGTGCAAAGG...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CAATGCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCATGATACTGCCTTGTGCATAATTCTTCCTTaGTTCATAAAGGGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: QCGLPSSQVFLPAHDTALCIILP*FIKGLC
Trigger: GCAAAGGCCCTTTATGAACAAAGGAAGAATTATGCA...CAAGGCAGTATCATGAGCAGGAAGAAACACCTGAGATGATGGCAGCCCGCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTGTCCACACTTTGCCCTaGGCATCAAGCAATTTCAAT +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPVHTLP*ASSNFN
Trigger: ATTGAAATTGCTTGATGCCAAGGGCAAAGTGTGGAC...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TGCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCATGATACTGCCTTGGTTCTTGGCAGTGCTGGATaGTGTTTAAAGGAAAATTCT +
Preference number: 5 (lower is better)
Translates to: CGLPSSQVFLPAHDTALVLGSAG*CLKENS
Trigger: AGAATTTTCCTTTAAACACAATCCAGCACTGCCAAG...AACCAAGGCAGTATCATGAGCAGGAAGAAACACCTGAGATGATGGCAGCCCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCACTGGCTTGTTCTGGGTaGGCTCTTTGCACACCAGTG +
Preference number: 5 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKALACSG*ALCTPV
Trigger: CACTGGTGTGCAAAGAGCCAACCCAGAACAAGCCAG...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAGCTCATGATACTGCCTaGGTTTCTCAAAGTCCCCTT +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRAHDTA*VSQSPL
Trigger: AAGGGGACTTTGAGAAACCAAGGCAGTATCATGAGC...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCGCTCATGATACTGCCTaGGTTTCTCAAAGTCCCCTT +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCAHDTA*VSQSPL
Trigger: AAGGGGACTTTGAGAAACCAAGGCAGTATCATGAGC...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCACAGGAGGTGGAGGTTTaGCCCGCAGCGTTAAAACAC +
Preference number: 5 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKAQEVEV*PAALKH
Trigger: GTGTTTTAACGCTGCGGGCAAAACCTCCACCTCCTG...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGGGGGCTCCCAGCCATaGCGGAATCGTGGAACATAT +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCGGSQP*RNRGTY
Trigger: ATATGTTCCACGATTCCGCAATGGCTGGGAGCCCCC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTGATGTTCTGCTACATTaGCCACAGATTCTGCCAGTT +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPDVLLH*PQILPV
Trigger: AACTGGCAGAATCTGTGGCAAATGTAGCAGAACATC...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCAACAGCAGCTTCCCCTaGGTCCAGGTGGGATCCTCT +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCNSSFP*VQVGSS
Trigger: AGAGGATCCCACCTGGACCAAGGGGAAGCTGCTGTT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCACCGAGAGCTCACTGTaGTTCCTTGCTACAAAGTCA +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCTESSL*FLATKS
Trigger: TGACTTTGTAGCAAGGAACAACAGTGAGCTCTCGGT...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAACCGAGAGCTCACTGTaGTTCCTTGCTACAAAGTCA +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRTESSL*FLATKS
Trigger: TGACTTTGTAGCAAGGAACAACAGTGAGCTCTCGGT...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAATCCAGAGTCTCCACTaGCATTTCGAACTTTCCACC +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRIQSLH*HFELST
Trigger: GGTGGAAAGTTCGAAATGCAAGTGGAGACTCTGGAT...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp ATCTTGTTCCATTGTGGCTCCCATAAAGTTCAGCATTGGGGGCTCCCAGCCATTTTTGACGTGTTATATTaGCTGGGACCTTTGACACAG +
Preference number: 5 (lower is better)
Translates to: ILFHCGSHKVQHWGLPAIFDVLY*LGPLTQ
Trigger: CTGTGTCAAAGGTCCCAGCAAATATAACACGTCAAA...AATGGCTGGGAGCCCCCAATGCTGAACTTTATGGGAGCCACAATGGAACAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTACTGGAGCTGCTGTTTaGACGTGTTATATTTGCTGG +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPTGAAV*TCYICW
Trigger: CCAGCAAATATAACACGTCAAAACAGCAGCTCCAGT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCATCCACCGGAAGTTGTTaGTGTCTCTGGCTGTCTCGC +
Preference number: 5 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKASTGSC*CLWLSR
Trigger: GCGAGACAGCCAGAGACACAAACAACTTCCGGTGGA...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CAA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCATCGGTCCACCGGAAGTaGTTTGTGTCTCTGGCTGTC +
Preference number: 5 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKASVHRK*FVSLAV
Trigger: GACAGCCAGAGACACAAACAACTTCCGGTGGACCGA...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCGTGGATGAGTTCATCTaGCACTTCCTCCATCTGAGA +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCVDEFI*HFLHLR
Trigger: TCTCAGATGGAGGAAGTGCAAGATGAACTCATCCAC...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAGTGGATGAGTTCATCTaGCACTTCCTCCATCTGAGA +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRVDEFI*HFLHLR
Trigger: TCTCAGATGGAGGAAGTGCAAGATGAACTCATCCAC...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTTGACAGTCACAGGGTaGAATCCCTTTGACTGTAAC +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPLTVTG*NPFDCN
Trigger: GTTACAGTCAAAGGGATTCAACCCTGTGACTGTCAA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CACATCTCTGTCAATGCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCATGCTCAGTTCATCCTTATaGAGAGAGAAAAGTTGTGCA +
Preference number: 5 (lower is better)
Translates to: HISVNAGCHHLRCFFLLMLSSSL*REKSCA
Trigger: TGCACAACTTTTCTCTCTCAATAAGGATGAACTGAG...CATGAGCAGGAAGAAACACCTGAGATGATGGCAGCCCGCATTGACAGAGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTTTTTGTACAGTGATTaGGCTATAGACTCTCGCCCC +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPFLYSD*AIDSRP
Trigger: GGGGCGAGAGTCTATAGCCAAATCACTGTACAAAAA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGATGGAGCAGGGGGAGTATCAGCTGGTCTTGGGCCATACTCCATCCTTTGTTTCCATAGATTTATATTaGCATGTCCAAGGTATGGCT +
Preference number: 5 (lower is better)
Translates to: VMEQGEYQLVLGHTPSFVSIDLY*HVQGMA
Trigger: AGCCATACCTTGGACATGCAAATATAAATCTATGGA...AACAAAGGATGGAGTATGGCCCAAGACCAGCTGATACTCCCCCTGCTCCATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTCATTGTGTCTTTCACTaGTGTGTTGGGAATTCCAGG +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPHCVFH*CVGNSR
Trigger: CCTGGAATTCCCAACACACAAGTGAAAGACACAATG...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642939.1
ENST00000645775.1
ENST00000646828.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACCATTTGCTCCACAGTaGTGGCTTTCACATACTGGA +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRPFAPQ*WLSHTG
Trigger: TCCAGTATGTGAAAGCCACAACTGTGGAGCAAATGG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646918.1
ENST00000647087.1
CDS TCA 90 bp TCTTCACTAATTAGGTTTGCCTTAACCTCATCACACTGGAAGAGATaGAGATCTGGCTTGTTCTGGGTTGGCTCTTTGCACACCAGTGCA +
Preference number: 5 (lower is better)
Translates to: SSLIRFALTSSHWKR*RSGLFWVGSLHTSA
Trigger: TGCACTGGTGTGCAAAGAGCCAACCCAGAACAAGCCAGATCTTCATCTCTTCCAGTGTGATGAGGTTAAGGCAAACCTAATTAGTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000281172.10
ENST00000508018.2
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TATATGGCGATTAGAAGTTGGCTTAAAAGCAACAGCAGCTTCCCCTTGGTCCAGCCTTTGCACTTGTTTTaGAACCATGTTCTCTGTCCG +
Preference number: 5 (lower is better)
Translates to: YMAIRSWLKSNSSFPLVQPLHLF*NHVLCP
Trigger: CGGACAGAGAACATGGTTCAAAAACAAGTGCAAAGG...CTGGACCAAGGGGAAGCTGCTGTTGCTTTTAAGCCAACTTCTAATCGCCATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACCTTTGCACTTGTTTTaGAACCATGTTCTCTGTCCG +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRPLHLF*NHVLCP
Trigger: CGGACAGAGAACATGGTTCAAAAACAAGTGCAAAGG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCCCTTTGCACTTGTTTTaGAACCATGTTCTCTGTCCG +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCPLHLF*NHVLCP
Trigger: CGGACAGAGAACATGGTTCAAAAACAAGTGCAAAGG...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCGTCCACACTTTGCCCTaGGCATCAAGCAATTTCAAT +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCVHTLP*ASSNFN
Trigger: ATTGAAATTGCTTGATGCCAAGGGCAAAGTGTGGAC...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAGTCCACACTTTGCCCTaGGCATCAAGCAATTTCAAT +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRVHTLP*ASSNFN
Trigger: ATTGAAATTGCTTGATGCCAAGGGCAAAGTGTGGAC...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CAAATCTGCAGCACTAGGATTCTGAATATGAGACTTCAGTTTGGCCAGAAGGTTTTCTGGGTTGGCTCTTaGCACACCAGTGCAAGAACT +
Preference number: 5 (lower is better)
Translates to: QICSTRILNMRLQFGQKVFWVGS*HTSART
Trigger: AGTTCTTGCACTGGTGTGCAAAGAGCCAACCCAGAA...AACCTTCTGGCCAAACTGAAGTCTCATATTCAGAATCCTAGTGCTGCAGATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCTGGCTTGTTCTGGGTaGGCTCTTTGCACACCAGTG +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCLACSG*ALCTPV
Trigger: CACTGGTGTGCAAAGAGCCAACCCAGAACAAGCCAG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTTTCTCAAAGTCCCCTaGGTCGGCTGCCCATGCAGA +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCFLKVP*VGCPCR
Trigger: TCTGCATGGGCAGCCGACCAAGGGGACTTTGAGAAA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCAGGAGGTGGAGGTTTaGCCCGCAGCGTTAAAACAC +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCQEVEV*PAALKH
Trigger: GTGTTTTAACGCTGCGGGCAAAACCTCCACCTCCTG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CCGAGAGCTCACTGTTGTTCCTTGCTACAAAGTCATACTTGGATTTGGCATATTGTTCAGGACCTCCTGTaGCCTGCACCACCATATTTA +
Preference number: 5 (lower is better)
Translates to: PRAHCCSLLQSHTWIWHIVQDLL*PAPPYL
Trigger: TAAATATGGTGGTGCAGGCAACAGGAGGTCCTGAAC...AATATGCCAAATCCAAGTATGACTTTGTAGCAAGGAACAACAGTGAGCTCTCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGGGGGGCTCCCAGCCATaGCGGAATCGTGGAACATAT +
Preference number: 5 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVGGSQP*RNRGTY
Trigger: ATATGTTCCACGATTCCGCAATGGCTGGGAGCCCCC...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTGGGGGCTCCCAGCCATaGCGGAATCGTGGAACATAT +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTGGSQP*RNRGTY
Trigger: ATATGTTCCACGATTCCGCAATGGCTGGGAGCCCCC...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTCAGTTGATAAAGATCTaGTTCCATTGTGGCTCCCAT +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPQLIKI*FHCGSH
Trigger: ATGGGAGCCACAATGGAACAAGATCTTTATCAACTG...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCGATGTTCTGCTACATTaGCCACAGATTCTGCCAGTT +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCDVLLH*PQILPV
Trigger: AACTGGCAGAATCTGTGGCAAATGTAGCAGAACATC...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GGAGCTGCCACTGCTATCCTCCAATGCAGCTTTTTGTACAGTGATTTGGCTATAGATGTTCTGCTACATTaGCCACAGATTCTGCCAGTT +
Preference number: 5 (lower is better)
Translates to: GAATAILQCSFLYSDLAIDVLLH*PQILPV
Trigger: AACTGGCAGAATCTGTGGCAAATGTAGCAGAACATC...TATAGCCAAATCACTGTACAAAAAGCTGCATTGGAGGATAGCAGTGGCAGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAGATGTTCTGCTACATTaGCCACAGATTCTGCCAGTT +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRDVLLH*PQILPV
Trigger: AACTGGCAGAATCTGTGGCAAATGTAGCAGAACATC...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTAACAGCAGCTTCCCCTaGGTCCAGGTGGGATCCTCT +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTNSSFP*VQVGSS
Trigger: AGAGGATCCCACCTGGACCAAGGGGAAGCTGCTGTT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CAATGCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCATGATACTGCCTTGGCTACAAAGTCATACTaGGATTTGGCATATTTCTTG +
Preference number: 5 (lower is better)
Translates to: QCGLPSSQVFLPAHDTALATKSY*DLAYFL
Trigger: CAAGAAATATGCCAAATCCAAGTATGACTTTGTAGC...CAAGGCAGTATCATGAGCAGGAAGAAACACCTGAGATGATGGCAGCCCGCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCGCTCACTGTTGTTCCTaGCTACAAAGTCATACTTGG +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCAHCCS*LQSHTW
Trigger: CCAAGTATGACTTTGTAGCAAGGAACAACAGTGAGC...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAGCTCACTGTTGTTCCTaGCTACAAAGTCATACTTGG +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRAHCCS*LQSHTW
Trigger: CCAAGTATGACTTTGTAGCAAGGAACAACAGTGAGC...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTCGAACTTTCCACCATaGCTTCCGATCATCAAGTAT +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPSNFPP*LPIIKY
Trigger: ATACTTGATGATCGGAAGCAATGGTGGAAAGTTCGA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTTTGACGTGTTATATTaGCTGGGACCTTTGACACAG +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPFDVLY*LGPLTQ
Trigger: CTGTGTCAAAGGTCCCAGCAAATATAACACGTCAAA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCACTGGAGCTGCTGTTTaGACGTGTTATATTTGCTGG +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCTGAAV*TCYICW
Trigger: CCAGCAAATATAACACGTCAAAACAGCAGCTCCAGT...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAACTGGAGCTGCTGTTTaGACGTGTTATATTTGCTGG +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRTGAAV*TCYICW
Trigger: CCAGCAAATATAACACGTCAAAACAGCAGCTCCAGT...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CTTCAGTTTGGCCAGAAGGTTAAATCCGTGTTTAAACTTTTGGAAACAGTCAAGTCCACCGGAAGTTGTTaGTGTCTCTGGCTGTCTCGC +
Preference number: 5 (lower is better)
Translates to: LQFGQKVKSVFKLLETVKSTGSC*CLWLSR
Trigger: GCGAGACAGCCAGAGACACAAACAACTTCCGGTGGA...CTTGACTGTTTCCAAAAGTTTAAACACGGATTTAACCTTCTGGCCAAACTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTCCACCGGAAGTTGTTaGTGTCTCTGGCTGTCTCGC +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCSTGSC*CLWLSR
Trigger: GCGAGACAGCCAGAGACACAAACAACTTCCGGTGGA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTCGGTCCACCGGAAGTaGTTTGTGTCTCTGGCTGTC +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCSVHRK*FVSLAV
Trigger: GACAGCCAGAGACACAAACAACTTCCGGTGGACCGA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTTGACAGTCACAGGGTaGAATCCCTTTGACTGTAAC +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCLTVTG*NPFDCN
Trigger: GTTACAGTCAAAGGGATTCAACCCTGTGACTGTCAA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATTTTTGTACAGTGATTaGGCTATAGACTCTCGCCCC +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRFLYSD*AIDSRP
Trigger: GGGGCGAGAGTCTATAGCCAAATCACTGTACAAAAA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTTTTTGTACAGTGATTaGGCTATAGACTCTCGCCCC +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCFLYSD*AIDSRP
Trigger: GGGGCGAGAGTCTATAGCCAAATCACTGTACAAAAA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TTGCACATCTCTGTCAATGCGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCATGAATATGACAAACTaGTCCAAAAAGGGACTAGTC +
Preference number: 5 (lower is better)
Translates to: LHISVNAGCHHLRCFFLLMNMTN*SKKGLV
Trigger: GACTAGTCCCTTTTTGGACAAGTTTGTCATATTCAT...GAGCAGGAAGAAACACCTGAGATGATGGCAGCCCGCATTGACAGAGATGTGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546261.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTCTTTCACTTGTGTGTaGGGAATTCCAGGTACAGAA +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPSFTCV*GIPGTE
Trigger: TTCTGTACCTGGAATTCCCAACACACAAGTGAAAGA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642939.1
ENST00000645775.1
ENST00000646828.1
CDS CCA 90 bp ATACTGCCTTGGTTTCTCAACATTTGCCAAAGGGAACACCTCCACTaGATACACAAGTCAAAACTGTGCTCATCAGCCATGAAATGCATC +
Preference number: 5 (lower is better)
Translates to: ILPWFLNICQREHLH*IHKSKLCSSAMKCI
Trigger: GATGCATTTCATGGCTGATGAGCACAGTTTTGACTTGTGTATCCAGTGGAGGTGTTCCCTTTGGCAAATGTTGAGAAACCAAGGCAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542903.1
CDS CCA 90 bp ATTGTGTCTTTCACTTGTGTGTTGGGAATTCCAGGTACAGAAATATaGCCAACTGAGCTCATGAAGACTTCCCACTACAGACACTCGGAT +
Preference number: 5 (lower is better)
Translates to: IVSFTCVLGIPGTEI*PTELMKTSHYRHSD
Trigger: ATCCGAGTGTCTGTAGTGGGAAGTCTTCATGAGCTCAGTTGGCCATATTTCTGTACCTGGAATTCCCAACACACAAGTGAAAGACACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642939.1
ENST00000645775.1
CDS CCA 90 bp AGAACCTGCTTTCCCATTTGCTCCACAGTTGTGGCTTTCACATACTaGAAGAGGTCCATGAATCTTTCCAACTTCTTAGACTCCTACTCA +
Preference number: 5 (lower is better)
Translates to: RTCFPICSTVVAFTY*KRSMNLSNFLDSYS
Trigger: TGAGTAGGAGTCTAAGAAGTTGGAAAGATTCATGGACCTCTTCCAGTATGTGAAAGCCACAACTGTGGAGCAAATGGGAAAGCAGGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646918.1
CDS CCA 90 bp GTGTTCTGCTTTCCCATTTGCTCCACAGTTGTGGCTTTCACATACTaGAAGAGGTCCATGAATCTTTCCAACTTCTTAGACTCCTACTCA +
Preference number: 5 (lower is better)
Translates to: VFCFPICSTVVAFTY*KRSMNLSNFLDSYS
Trigger: TGAGTAGGAGTCTAAGAAGTTGGAAAGATTCATGGACCTCTTCCAGTATGTGAAAGCCACAACTGTGGAGCAAATGGGAAAGCAGAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647087.1
CDS-3UTR CAA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCACATTGTGTCTTTCACTaGTGTGTTCTCGGATCCGCC +
Preference number: 5 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKAHCVFH*CVLGSA
Trigger: GGCGGATCCGAGAACACACAAGTGAAAGACACAATG...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000644374.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTGTTCATAAAGGGCCTTaGCACTTGTTTTTGAACCAT +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPVHKGP*HLFLNH
Trigger: ATGGTTCAAAAACAAGTGCAAAGGCCCTTTATGAAC...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTGCATAATTCTTCCTTaGTTCATAAAGGGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPCIILP*FIKGLC
Trigger: GCAAAGGCCCTTTATGAACAAAGGAAGAATTATGCA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CCATCATCAACAGTGATCATAGCATCTTTCCGATCCAGGACAAAGGTAGTCAAGGTCCACACTTTGCCCTaGGCATCAAGCAATTTCAAT +
Preference number: 5 (lower is better)
Translates to: PSSTVIIASFRSRTKVVKVHTLP*ASSNFN
Trigger: ATTGAAATTGCTTGATGCCAAGGGCAAAGTGTGGAC...CTTGACTACCTTTGTCCTGGATCGGAAAGATGCTATGATCACTGTTGATGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536956.5
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTTGAAGAATCATATCTaGAGTCCACACTTTGCCCTT +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPLKNHI*SPHFAL
Trigger: AAGGGCAAAGTGTGGACTCAAGATATGATTCTTCAA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTAGCTCTGTCATCCACTaGAAGAATCATATCTTGAGT +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPSSVIH*KNHILS
Trigger: ACTCAAGATATGATTCTTCAAGTGGATGACAGAGCT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTCTTGGCAGTGCTGGATaGTGTTTAAAGGAAAATTCT +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPLGSAG*CLKENS
Trigger: AGAATTTTCCTTTAAACACAATCCAGCACTGCCAAG...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCTGGCTTGTTCTGGGTaGGCTCTTTGCACACCAGTG +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTLACSG*ALCTPV
Trigger: CACTGGTGTGCAAAGAGCCAACCCAGAACAAGCCAG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCAATACTAGGGTCTGCATaGGAAATCATCCTCAGGGCG +
Preference number: 5 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKAILGSA*EIILRA
Trigger: CGCCCTGAGGATGATTTCCAATGCAGACCCTAGTAT...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTTTCTCAAAGTCCCCTaGGTCGGCTGCCCATGCAGA +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTFLKVP*VGCPCR
Trigger: TCTGCATGGGCAGCCGACCAAGGGGACTTTGAGAAA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCAGGAGGTGGAGGTTTaGCCCGCAGCGTTAAAACAC +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTQEVEV*PAALKH
Trigger: GTGTTTTAACGCTGCGGGCAAAACCTCCACCTCCTG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCAGTTCAGGACCTCCTGTaGCCTGCACCACCATATTTA +
Preference number: 5 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKAVQDLL*PAPPYL
Trigger: TAAATATGGTGGTGCAGGCAACAGGAGGTCCTGAAC...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACAGTTGATAAAGATCTaGTTCCATTGTGGCTCCCAT +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRQLIKI*FHCGSH
Trigger: ATGGGAGCCACAATGGAACAAGATCTTTATCAACTG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCCAGTTGATAAAGATCTaGTTCCATTGTGGCTCCCAT +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCQLIKI*FHCGSH
Trigger: ATGGGAGCCACAATGGAACAAGATCTTTATCAACTG...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTCGAACTTTCCACCATaGCTTCCGATCATCAAGTAT +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCSNFPP*LPIIKY
Trigger: ATACTTGATGATCGGAAGCAATGGTGGAAAGTTCGA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATCGAACTTTCCACCATaGCTTCCGATCATCAAGTAT +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRSNFPP*LPIIKY
Trigger: ATACTTGATGATCGGAAGCAATGGTGGAAAGTTCGA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTGCCATACTCCATCCTTaGTTTCTGTATAGTATGAGT +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPAILHP*FLYSMS
Trigger: ACTCATACTATACAGAAACAAAGGATGGAGTATGGC...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCAGAGTATCAGCTGGTCTaGGGCCATACTCCATCCTTT +
Preference number: 5 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKAEYQLV*GHTPSF
Trigger: AAAGGATGGAGTATGGCCCAAGACCAGCTGATACTC...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CAA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCATATTTGCTGGGACCTTaGACACAGGAACAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKAYLLGP*TQEQVL
Trigger: CAGCACCTGTTCCTGTGTCAAAGGTCCCAGCAAATA...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTTTGACGTGTTATATTaGCTGGGACCTTTGACACAG +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCFDVLY*LGPLTQ
Trigger: CTGTGTCAAAGGTCCCAGCAAATATAACACGTCAAA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTCCACCGGAAGTTGTTaGTGTCTCTGGCTGTCTCGC +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTSTGSC*CLWLSR
Trigger: GCGAGACAGCCAGAGACACAAACAACTTCCGGTGGA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGTCGGTCCACCGGAAGTaGTTTGTGTCTCTGGCTGTC +
Preference number: 5 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVSVHRK*FVSLAV
Trigger: GACAGCCAGAGACACAAACAACTTCCGGTGGACCGA...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTAATACTCCAAGACTATaGACAGTCACAGGGTTGAAT +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPNTPRL*TVTGLN
Trigger: ATTCAACCCTGTGACTGTCAATAGTCTTGGAGTATT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTCTCAGTTCATCCTTATaGAGAGAGAAAAGTTGTGCA +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPLSSSL*REKSCA
Trigger: TGCACAACTTTTCTCTCTCAATAAGGATGAACTGAG...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTCTCCAATGCAGCTTTTaGTACAGTGATTTGGCTATA +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPLQCSF*YSDLAI
Trigger: TATAGCCAAATCACTGTACAAAAAGCTGCATTGGAG...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTAGCAAATACTGTTTATaGCAGACTTTCCAGCTGACT +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPSKYCL*QTFQLT
Trigger: AGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCT...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTCTTTCACTTGTGTGTaGGGAATTCCAGGTACAGAA +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCSFTCV*GIPGTE
Trigger: TTCTGTACCTGGAATTCCCAACACACAAGTGAAAGA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642939.1
ENST00000645775.1
ENST00000646828.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCGTCCATAAAGGGCCTTaGCACTTGTTTTTGAACCAT +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCVHKGP*HLFLNH
Trigger: ATGGTTCAAAAACAAGTGCAAAGGCCCTTTATGGAC...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642939.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTACCTTGCAGTCTTTTaGCCTACAAGTGGTTTTCTT +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPYLAVF*PTSGFL
Trigger: AAGAAAACCACTTGTAGGCAAAAAGACTGCAAGGTA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642278.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACATTGTGTCTTTCACTaGTGTGTTCTGCTTTCCCAT +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRHCVFH*CVLLSH
Trigger: ATGGGAAAGCAGAACACACAAGTGAAAGACACAATG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647087.1
CDS TCA 90 bp CAGGACAAAGGTAGTCAAGTGTTCAACACGGTATTGAGATATATCTaGCACACTGCTGACACTGTCCCGTGCATAATTCTTCCTTTGTTC +
Preference number: 5 (lower is better)
Translates to: QDKGSQVFNTVLRYI*HTADTVPCIILPLF
Trigger: GAACAAAGGAAGAATTATGCACGGGACAGTGTCAGCAGTGTGTCAGATATATCTCAATACCGTGTTGAACACTTGACTACCTTTGTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000281172.10
ENST00000535752.5
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000546311.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS TCA 90 bp ACACAGTTCAGGAAATACTCCTCTAAGCAATCGTCCAGGCAATATTaGGAGGCCATTCCACTCAGTTTACTTATGTGCCAAGTGACCTTT +
Preference number: 5 (lower is better)
Translates to: TQFRKYSSKQSSRQY*EAIPLSLLMCQVTF
Trigger: AAAGGTCACTTGGCACATAAGTAAACTGAGTGGAATGGCCTCTCAATATTGCCTGGACGATTGCTTAGAGGAGTATTTCCTGAACTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543612.5
CDS CCA 90 bp ATTGTGTCTTTCACTTGTGTGTTGGGAATTCCAGGTACAGAAATATaGCCAACTGAGCTCATGAAGACTTCCCACTACAGACAATTAGGC +
Preference number: 5 (lower is better)
Translates to: IVSFTCVLGIPGTEI*PTELMKTSHYRQLG
Trigger: GCCTAATTGTCTGTAGTGGGAAGTCTTCATGAGCTCAGTTGGCCATATTTCTGTACCTGGAATTCCCAACACACAAGTGAAAGACACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646828.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCGTTCATAAAGGGCCTTaGCACTTGTTTTTGAACCAT +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCVHKGP*HLFLNH
Trigger: ATGGTTCAAAAACAAGTGCAAAGGCCCTTTATGAAC...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAGTTCATAAAGGGCCTTaGCACTTGTTTTTGAACCAT +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRVHKGP*HLFLNH
Trigger: ATGGTTCAAAAACAAGTGCAAAGGCCCTTTATGAAC...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATGCATAATTCTTCCTTaGTTCATAAAGGGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRCIILP*FIKGLC
Trigger: GCAAAGGCCCTTTATGAACAAAGGAAGAATTATGCA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTGCATAATTCTTCCTTaGTTCATAAAGGGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCCIILP*FIKGLC
Trigger: GCAAAGGCCCTTTATGAACAAAGGAAGAATTATGCA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTATTTGGCACAAATCCAGAGTCTCCACTTGCATTTCGAACTTTCCACCATTGGTCCACACTTTGCCCTaGGCATCAAGCAATTTCAAT +
Preference number: 5 (lower is better)
Translates to: VIWHKSRVSTCISNFPPLVHTLP*ASSNFN
Trigger: ATTGAAATTGCTTGATGCCAAGGGCAAAGTGTGGAC...CAATGGTGGAAAGTTCGAAATGCAAGTGGAGACTCTGGATTTGTGCCAAATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTTGAAGAATCATATCTaGAGTCCACACTTTGCCCTT +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCLKNHI*SPHFAL
Trigger: AAGGGCAAAGTGTGGACTCAAGATATGATTCTTCAA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GGAGCTGCCACTGCTATCCTCCAATGCAGCTTTTTGTACAGTGATTTGGCTATAAGCTCTGTCATCCACTaGAAGAATCATATCTTGAGT +
Preference number: 5 (lower is better)
Translates to: GAATAILQCSFLYSDLAISSVIH*KNHILS
Trigger: ACTCAAGATATGATTCTTCAAGTGGATGACAGAGCT...TATAGCCAAATCACTGTACAAAAAGCTGCATTGGAGGATAGCAGTGGCAGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAGCTCTGTCATCCACTaGAAGAATCATATCTTGAGT +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRSSVIH*KNHILS
Trigger: ACTCAAGATATGATTCTTCAAGTGGATGACAGAGCT...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCAGCTCTGTCATCCACTaGAAGAATCATATCTTGAGT +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCSSVIH*KNHILS
Trigger: ACTCAAGATATGATTCTTCAAGTGGATGACAGAGCT...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTCTCCAGTTCATTCTTaGATTCTAAATCAATCAGGC +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPSPVHS*ILNQSG
Trigger: GCCTGATTGATTTAGAATCAAAGAATGAACTGGAGA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACTTGGCAGTGCTGGATaGTGTTTAAAGGAAAATTCT +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRLGSAG*CLKENS
Trigger: AGAATTTTCCTTTAAACACAATCCAGCACTGCCAAG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCCTTGGCAGTGCTGGATaGTGTTTAAAGGAAAATTCT +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCLGSAG*CLKENS
Trigger: AGAATTTTCCTTTAAACACAATCCAGCACTGCCAAG...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTTCTGGGTTGGCTCTTaGCACACCAGTGCAAGAACT +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCFWVGS*HTSART
Trigger: AGTTCTTGCACTGGTGTGCAAAGAGCCAACCCAGAA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCATACTAGGGTCTGCATaGGAAATCATCCTCAGGGCG +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCILGSA*EIILRA
Trigger: CGCCCTGAGGATGATTTCCAATGCAGACCCTAGTAT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGTTCAGGACCTCCTGTaGCCTGCACCACCATATTTA +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCVQDLL*PAPPYL
Trigger: TAAATATGGTGGTGCAGGCAACAGGAGGTCCTGAAC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCCACAGATTCTGCCAGTaGATAAAGATCTTGTTCCAT +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCHRFCQ*IKILFH
Trigger: ATGGAACAAGATCTTTATCAACTGGCAGAATCTGTG...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACACAGATTCTGCCAGTaGATAAAGATCTTGTTCCAT +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRHRFCQ*IKILFH
Trigger: ATGGAACAAGATCTTTATCAACTGGCAGAATCTGTG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTGCTACAAAGTCATACTaGGATTTGGCATATTTCTTG +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPATKSY*DLAYFL
Trigger: CAAGAAATATGCCAAATCCAAGTATGACTTTGTAGC...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCAACCGAGAGCTCACTGTaGTTCCTTGCTACAAAGTCA +
Preference number: 5 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKATESSL*FLATKS
Trigger: TGACTTTGTAGCAAGGAACAACAGTGAGCTCTCGGT...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CAA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCAATCCAGAGTCTCCACTaGCATTTCGAACTTTCCACC +
Preference number: 5 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKAIQSLH*HFELST
Trigger: GGTGGAAAGTTCGAAATGCAAGTGGAGACTCTGGAT...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCGCCATACTCCATCCTTaGTTTCTGTATAGTATGAGT +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCAILHP*FLYSMS
Trigger: ACTCATACTATACAGAAACAAAGGATGGAGTATGGC...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAGCCATACTCCATCCTTaGTTTCTGTATAGTATGAGT +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRAILHP*FLYSMS
Trigger: ACTCATACTATACAGAAACAAAGGATGGAGTATGGC...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGAGTATCAGCTGGTCTaGGGCCATACTCCATCCTTT +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCEYQLV*GHTPSF
Trigger: AAAGGATGGAGTATGGCCCAAGACCAGCTGATACTC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTATTTGCTGGGACCTTaGACACAGGAACAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCYLLGP*TQEQVL
Trigger: CAGCACCTGTTCCTGTGTCAAAGGTCCCAGCAAATA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCAGTGGATGAGTTCATCTaGCACTTCCTCCATCTGAGA +
Preference number: 5 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKAVDEFI*HFLHLR
Trigger: TCTCAGATGGAGGAAGTGCAAGATGAACTCATCCAC...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCAATACTCCAAGACTATaGACAGTCACAGGGTTGAAT +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCNTPRL*TVTGLN
Trigger: ATTCAACCCTGTGACTGTCAATAGTCTTGGAGTATT...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCCTCAGTTCATCCTTATaGAGAGAGAAAAGTTGTGCA +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCLSSSL*REKSCA
Trigger: TGCACAACTTTTCTCTCTCAATAAGGATGAACTGAG...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACTCAGTTCATCCTTATaGAGAGAGAAAAGTTGTGCA +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRLSSSL*REKSCA
Trigger: TGCACAACTTTTCTCTCTCAATAAGGATGAACTGAG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGACTCCAATGCAGCTTTTaGTACAGTGATTTGGCTATA +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRLQCSF*YSDLAI
Trigger: TATAGCCAAATCACTGTACAAAAAGCTGCATTGGAG...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCCTCCAATGCAGCTTTTaGTACAGTGATTTGGCTATA +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCLQCSF*YSDLAI
Trigger: TATAGCCAAATCACTGTACAAAAAGCTGCATTGGAG...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TGTCAGAGAAGAGACTTAAGTAAGCAGAGGCTAGCCTACAGTGAGCTATGCCCTTCCATAGATTTATATTaGCATGTCCAAGGTATGGCT +
Preference number: 5 (lower is better)
Translates to: CQRRDLSKQRLAYSELCPSIDLY*HVQGMA
Trigger: AGCCATACCTTGGACATGCAAATATAAATCTATGGA...AGGGCATAGCTCACTGTAGGCTAGCCTCTGCTTACTTAAGTCTCTTCTCTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTTGGCAGGATCCTCATaGTCCACCTCCAATCAGACT +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCLAGSS*STSNQT
Trigger: AGTCTGATTGGAGGTGGACAATGAGGATCCTGCCAA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646828.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTTCACTCCTGGATATTaGGTCCTCTCCGGGTTTGTG +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCFTPGY*VLSGFV
Trigger: CACAAACCCGGAGAGGACCAAATATCCAGGAGTGAA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642278.1
CDS TCA 90 bp CAGGACAAAGGTAGTCAAGTGTTCAACACGGTATTGAGATATATCTaGCACACTGCTGACACTGTCCCGTGCATAATTCTTCCTTTGTTT +
Preference number: 5 (lower is better)
Translates to: QDKGSQVFNTVLRYI*HTADTVPCIILPLF
Trigger: AAACAAAGGAAGAATTATGCACGGGACAGTGTCAGCAGTGTGTCAGATATATCTCAATACCGTGTTGAACACTTGACTACCTTTGTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536956.5
CDS-3UTR CAA 90 bp CATCCACTTGAAGAATCATATCTTGAGTCCACACTTTGCCCTTGGCATCAAGCAAGCTCTGTCATCCACTaGAAGAATCATATCTTGAGT +
Preference number: 5 (lower is better)
Translates to: HPLEESYLESTLCPWHQASSVIH*KNHILS
Trigger: ACTCAAGATATGATTCTTCAAGTGGATGACAGAGCT...TGCTTGATGCCAAGGGCAAAGTGTGGACTCAAGATATGATTCTTCAAGTGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536956.5
CDS-3UTR CAA 90 bp GGAGCTGCCACTGCTATCCTCCAATGCAGCTTTTTGTACAGTGATTTGGCTATATCTCCAGTTCATTCTTaGATTCTAAATCAATCAGGC +
Preference number: 5 (lower is better)
Translates to: GAATAILQCSFLYSDLAISPVHS*ILNQSG
Trigger: GCCTGATTGATTTAGAATCAAAGAATGAACTGGAGA...TATAGCCAAATCACTGTACAAAAAGCTGCATTGGAGGATAGCAGTGGCAGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTCTCCAGTTCATTCTTaGATTCTAAATCAATCAGGC +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCSPVHS*ILNQSG
Trigger: GCCTGATTGATTTAGAATCAAAGAATGAACTGGAGA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATCTCCAGTTCATTCTTaGATTCTAAATCAATCAGGC +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRSPVHS*ILNQSG
Trigger: GCCTGATTGATTTAGAATCAAAGAATGAACTGGAGA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp AATCAGGCTCACAGCTCTGTCATCCACTTGAAGAATCATATCTTGAGTCCACACCTTGGCAGTGCTGGATaGTGTTTAAAGGAAAATTCT +
Preference number: 5 (lower is better)
Translates to: NQAHSSVIHLKNHILSPHLGSAG*CLKENS
Trigger: AGAATTTTCCTTTAAACACAATCCAGCACTGCCAAG...GTGTGGACTCAAGATATGATTCTTCAAGTGGATGACAGAGCTGTGAGCCTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536956.5
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTATACTAGGGTCTGCATaGGAAATCATCCTCAGGGCG +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTILGSA*EIILRA
Trigger: CGCCCTGAGGATGATTTCCAATGCAGACCCTAGTAT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGCTCATGATACTGCCTaGGTTTCTCAAAGTCCCCTT +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCAHDTA*VSQSPL
Trigger: AAGGGGACTTTGAGAAACCAAGGCAGTATCATGAGC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTGTTCAGGACCTCCTGTaGCCTGCACCACCATATTTA +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTVQDLL*PAPPYL
Trigger: TAAATATGGTGGTGCAGGCAACAGGAGGTCCTGAAC...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAGCTACAAAGTCATACTaGGATTTGGCATATTTCTTG +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRATKSY*DLAYFL
Trigger: CAAGAAATATGCCAAATCCAAGTATGACTTTGTAGC...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCGCTACAAAGTCATACTaGGATTTGGCATATTTCTTG +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCATKSY*DLAYFL
Trigger: CAAGAAATATGCCAAATCCAAGTATGACTTTGTAGC...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCAGCTCACTGTTGTTCCTaGCTACAAAGTCATACTTGG +
Preference number: 5 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKAAHCCS*LQSHTW
Trigger: CCAAGTATGACTTTGTAGCAAGGAACAACAGTGAGC...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCACCGAGAGCTCACTGTaGTTCCTTGCTACAAAGTCA +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCTESSL*FLATKS
Trigger: TGACTTTGTAGCAAGGAACAACAGTGAGCTCTCGGT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCATCCAGAGTCTCCACTaGCATTTCGAACTTTCCACC +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCIQSLH*HFELST
Trigger: GGTGGAAAGTTCGAAATGCAAGTGGAGACTCTGGAT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TTGAGAGAGAAAAGTTGTGCACCATTTAATACTCCAAGACTATTGACAGTCACAGAGTATCAGCTGGTCTaGGGCCATACTCCATCCTTT +
Preference number: 5 (lower is better)
Translates to: LREKSCAPFNTPRLLTVTEYQLV*GHTPSF
Trigger: AAAGGATGGAGTATGGCCCAAGACCAGCTGATACTC...TGTGACTGTCAATAGTCTTGGAGTATTAAATGGTGCACAACTTTTCTCTCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTGAGTATCAGCTGGTCTaGGGCCATACTCCATCCTTT +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTEYQLV*GHTPSF
Trigger: AAAGGATGGAGTATGGCCCAAGACCAGCTGATACTC...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTATTTGCTGGGACCTTaGACACAGGAACAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTYLLGP*TQEQVL
Trigger: CAGCACCTGTTCCTGTGTCAAAGGTCCCAGCAAATA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGTGGATGAGTTCATCTaGCACTTCCTCCATCTGAGA +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCVDEFI*HFLHLR
Trigger: TCTCAGATGGAGGAAGTGCAAGATGAACTCATCCAC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GGTCTCACAATATCCAAAATGTTATTTGGCACAAATCCAGAGTCTCCACTTGCATTGACAGTCACAGGGTaGAATCCCTTTGACTGTAAC +
Preference number: 5 (lower is better)
Translates to: GLTISKMLFGTNPESPLALTVTG*NPFDCN
Trigger: GTTACAGTCAAAGGGATTCAACCCTGTGACTGTCAA...TGCAAGTGGAGACTCTGGATTTGTGCCAAATAACATTTTGGATATTGTGAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCATTTTTGTACAGTGATTaGGCTATAGACTCTCGCCCC +
Preference number: 5 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKAFLYSD*AIDSRP
Trigger: GGGGCGAGAGTCTATAGCCAAATCACTGTACAAAAA...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATCCATAGATTTATATTaGCATGTCCAAGGTATGGCT +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRSIDLY*HVQGMA
Trigger: AGCCATACCTTGGACATGCAAATATAAATCTATGGA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTCCATAGATTTATATTaGCATGTCCAAGGTATGGCT +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCSIDLY*HVQGMA
Trigger: AGCCATACCTTGGACATGCAAATATAAATCTATGGA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGAAACTGCTTTCAAGTTCTCACGTaGTTTGACTCGAATCTTGTA +
Preference number: 5 (lower is better)
Translates to: VSYALNDRHHIHRQNRNCFQVLT*FDSNLV
Trigger: TACAAGATTCGAGTCAAACAACGTGAGAACTTGAAA...GCAGTTTCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
CDS-3UTR CAA 90 bp CCTACAGTGAGCTATGCCCTGAATGACAGACACCATATTCACAGGCAAAATCGATTTCAAGTTCTCACGTaGTTTGACTCGAATCTTGTA +
Preference number: 5 (lower is better)
Translates to: PTVSYALNDRHHIHRQNRFQVLT*FDSNLV
Trigger: TACAAGATTCGAGTCAAACAACGTGAGAACTTGAAA...TCGATTTTGCCTGTGAATATGGTGTCTGTCATTCAGGGCATAGCTCACTGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
CDS TCA 90 bp ACTAAGGAAAAAGAATGGAGACGTATTTCAAGTTCTCACGTTGTTTaGCTCGAATCTTGTAGACGGTGTTTGCTCACGAGCACTGAACTA +
Preference number: 5 (lower is better)
Translates to: TKEKEWRRISSSHVV*LESCRRCLLTSTEL
Trigger: TAGTTCAGTGCTCGTGAGCAAACACCGTCTACAAGATTCGAGTCAAACAACGTGAGAACTTGAAATACGTCTCCATTCTTTTTCCTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535752.5
ENST00000647087.1
CDS TCA 90 bp CATTGTGGAAGACAGTGTGGTGATCCCTTGAAGACCGTAAGTGAATaGACGAGAGTACTAAGGAAAAAGAATGGAGACGTATTTCAAGTT +
Preference number: 5 (lower is better)
Translates to: HCGRQCGDPLKTVSE*TRVLRKKNGDVFQV
Trigger: AACTTGAAATACGTCTCCATTCTTTTTCCTTAGTACTCTCGTTCATTCACTTACGGTCTTCAAGGGATCACCACACTGTCTTCCACAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646828.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCCTTTGCACTTGTTTTaGAACCATGTTCTCTGTCCG +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCPLHLF*NHVLCP
Trigger: CGGACAGAGAACATGGTTCAAAAACAAGTGCAAAGG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGTCCACACTTTGCCCTaGGCATCAAGCAATTTCAAT +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCVHTLP*ASSNFN
Trigger: ATTGAAATTGCTTGATGCCAAGGGCAAAGTGTGGAC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TCAGGCTCACAGCTCTGTCATCCACTTGAAGAATCATATCTTGAGTCCACACTTTCTCCAGTTCATTCTTaGATTCTAAATCAATCAGGC +
Preference number: 5 (lower is better)
Translates to: SGSQLCHPLEESYLESTLSPVHS*ILNQSG
Trigger: GCCTGATTGATTTAGAATCAAAGAATGAACTGGAGA...AAGTGTGGACTCAAGATATGATTCTTCAAGTGGATGACAGAGCTGTGAGCCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536956.5
CDS-3UTR CAA 90 bp AATATGAGACTTCAGTTTGGCCAGAAGGTTAAATCCGTGTTTAAACTTTTGGAAATACTAGGGTCTGCATaGGAAATCATCCTCAGGGCG +
Preference number: 5 (lower is better)
Translates to: NMRLQFGQKVKSVFKLLEILGSA*EIILRA
Trigger: CGCCCTGAGGATGATTTCCAATGCAGACCCTAGTAT...TTCCAAAAGTTTAAACACGGATTTAACCTTCTGGCCAAACTGAAGTCTCATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546261.1
CDS-3UTR CAA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGGCTCATGATACTGCCTaGGTTTCTCAAAGTCCCCTT +
Preference number: 5 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVAHDTA*VSQSPL
Trigger: AAGGGGACTTTGAGAAACCAAGGCAGTATCATGAGC...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281172.10
ENST00000543523.5
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTGCTCATGATACTGCCTaGGTTTCTCAAAGTCCCCTT +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTAHDTA*VSQSPL
Trigger: AAGGGGACTTTGAGAAACCAAGGCAGTATCATGAGC...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGATGTTCTGCTACATTaGCCACAGATTCTGCCAGTT +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCDVLLH*PQILPV
Trigger: AACTGGCAGAATCTGTGGCAAATGTAGCAGAACATC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGCTCACTGTTGTTCCTaGCTACAAAGTCATACTTGG +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCAHCCS*LQSHTW
Trigger: CCAAGTATGACTTTGTAGCAAGGAACAACAGTGAGC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TTGAGAGAGAAAAGTTGTGCACCATTTAATACTCCAAGACTATTGACAGTCACAACCGAGAGCTCACTGTaGTTCCTTGCTACAAAGTCA +
Preference number: 5 (lower is better)
Translates to: LREKSCAPFNTPRLLTVTTESSL*FLATKS
Trigger: TGACTTTGTAGCAAGGAACAACAGTGAGCTCTCGGT...TGTGACTGTCAATAGTCTTGGAGTATTAAATGGTGCACAACTTTTCTCTCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTACCGAGAGCTCACTGTaGTTCCTTGCTACAAAGTCA +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTTESSL*FLATKS
Trigger: TGACTTTGTAGCAAGGAACAACAGTGAGCTCTCGGT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTATCCAGAGTCTCCACTaGCATTTCGAACTTTCCACC +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTIQSLH*HFELST
Trigger: GGTGGAAAGTTCGAAATGCAAGTGGAGACTCTGGAT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCATTTGACGTGTTATATTaGCTGGGACCTTTGACACAG +
Preference number: 5 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKAFDVLY*LGPLTQ
Trigger: CTGTGTCAAAGGTCCCAGCAAATATAACACGTCAAA...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCACTGGAGCTGCTGTTTaGACGTGTTATATTTGCTGG +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCTGAAV*TCYICW
Trigger: CCAGCAAATATAACACGTCAAAACAGCAGCTCCAGT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTGTGGATGAGTTCATCTaGCACTTCCTCCATCTGAGA +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTVDEFI*HFLHLR
Trigger: TCTCAGATGGAGGAAGTGCAAGATGAACTCATCCAC...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTTGACAGTCACAGGGTaGAATCCCTTTGACTGTAAC +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCLTVTG*NPFDCN
Trigger: GTTACAGTCAAAGGGATTCAACCCTGTGACTGTCAA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTTTTTGTACAGTGATTaGGCTATAGACTCTCGCCCC +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCFLYSD*AIDSRP
Trigger: GGGGCGAGAGTCTATAGCCAAATCACTGTACAAAAA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GCCCCAATCCAGATTCTGGAGGTCTCACAATATCCAAAATGTTATTTGGCACAACTCCAATGCAGCTTTTaGTACAGTGATTTGGCTATA +
Preference number: 5 (lower is better)
Translates to: APIQILEVSQYPKCYLAQLQCSF*YSDLAI
Trigger: TATAGCCAAATCACTGTACAAAAAGCTGCATTGGAG...TTGTGCCAAATAACATTTTGGATATTGTGAGACCTCCAGAATCTGGATTGGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTCTTGTAGACGGTGTTaGCTCACGAGCACTGAACTA +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTSCRRC*LTSTEL
Trigger: TAGTTCAGTGCTCGTGAGCAAACACCGTCTACAAGA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647087.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCATTGTGTCTTTCACTaGTGTGTTGGGAATTCCAGG +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCHCVFH*CVGNSR
Trigger: CCTGGAATTCCCAACACACAAGTGAAAGACACAATG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642939.1
ENST00000645775.1
ENST00000646828.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTCTTGTAGACGGTGTTaGACAGCGGAAGAAATGACT +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCSCRRC*TAEEMT
Trigger: AGTCATTTCTTCCGCTGTCAAACACCGTCTACAAGA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646918.1
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCCATTTGCTCCACAGTaGTGGCTTTCACATACTGGA +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTPFAPQ*WLSHTG
Trigger: TCCAGTATGTGAAAGCCACAACTGTGGAGCAAATGG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646918.1
ENST00000647087.1
CDS-3UTR CAA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGCCTTTGCACTTGTTTTaGAACCATGTTCTCTGTCCG +
Preference number: 5 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVPLHLF*NHVLCP
Trigger: CGGACAGAGAACATGGTTCAAAAACAAGTGCAAAGG...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCCTTTGCACTTGTTTTaGAACCATGTTCTCTGTCCG +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTPLHLF*NHVLCP
Trigger: CGGACAGAGAACATGGTTCAAAAACAAGTGCAAAGG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTGTCCACACTTTGCCCTaGGCATCAAGCAATTTCAAT +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTVHTLP*ASSNFN
Trigger: ATTGAAATTGCTTGATGCCAAGGGCAAAGTGTGGAC...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCAAGCTCTGTCATCCACTaGAAGAATCATATCTTGAGT +
Preference number: 5 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKASSVIH*KNHILS
Trigger: ACTCAAGATATGATTCTTCAAGTGGATGACAGAGCT...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCAGTTGATAAAGATCTaGTTCCATTGTGGCTCCCAT +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCQLIKI*FHCGSH
Trigger: ATGGGAGCCACAATGGAACAAGATCTTTATCAACTG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTGATGTTCTGCTACATTaGCCACAGATTCTGCCAGTT +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTDVLLH*PQILPV
Trigger: AACTGGCAGAATCTGTGGCAAATGTAGCAGAACATC...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTGCTCACTGTTGTTCCTaGCTACAAAGTCATACTTGG +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTAHCCS*LQSHTW
Trigger: CCAAGTATGACTTTGTAGCAAGGAACAACAGTGAGC...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTCGAACTTTCCACCATaGCTTCCGATCATCAAGTAT +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCSNFPP*LPIIKY
Trigger: ATACTTGATGATCGGAAGCAATGGTGGAAAGTTCGA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCAGCCATACTCCATCCTTaGTTTCTGTATAGTATGAGT +
Preference number: 5 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKAAILHP*FLYSMS
Trigger: ACTCATACTATACAGAAACAAAGGATGGAGTATGGC...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTTTGACGTGTTATATTaGCTGGGACCTTTGACACAG +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCFDVLY*LGPLTQ
Trigger: CTGTGTCAAAGGTCCCAGCAAATATAACACGTCAAA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTTGACAGTCACAGGGTaGAATCCCTTTGACTGTAAC +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTLTVTG*NPFDCN
Trigger: GTTACAGTCAAAGGGATTCAACCCTGTGACTGTCAA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTTTTTGTACAGTGATTaGGCTATAGACTCTCGCCCC +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTFLYSD*AIDSRP
Trigger: GGGGCGAGAGTCTATAGCCAAATCACTGTACAAAAA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCACTCCAATGCAGCTTTTaGTACAGTGATTTGGCTATA +
Preference number: 5 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKALQCSF*YSDLAI
Trigger: TATAGCCAAATCACTGTACAAAAAGCTGCATTGGAG...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CAA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCAAGCAAATACTGTTTATaGCAGACTTTCCAGCTGACT +
Preference number: 5 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKASKYCL*QTFQLT
Trigger: AGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCT...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCATTGTGTCTTTCACTaGTGTGTTTACCACATGACG +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCHCVFH*CVYHMT
Trigger: CGTCATGTGGTAAACACACAAGTGAAAGACACAATG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543523.5
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCATTGTGTCTTTCACTaGTGTGTTCCACACAGTTCA +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCHCVFH*CVPHSS
Trigger: TGAACTGTGTGGAACACACAAGTGAAAGACACAATG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543612.5
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTCTTTCACTTGTGTGTaGGGAATTCCAGGTACAGAA +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCSFTCV*GIPGTE
Trigger: TTCTGTACCTGGAATTCCCAACACACAAGTGAAAGA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642939.1
ENST00000645775.1
ENST00000646828.1
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCATTGTGTCTTTCACTaGTGTGTTGGGAATTCCAGG +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTHCVFH*CVGNSR
Trigger: CCTGGAATTCCCAACACACAAGTGAAAGACACAATG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642939.1
ENST00000645775.1
ENST00000646828.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGTTCATAAAGGGCCTTaGCACTTGTTTTTGAACCAT +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCVHKGP*HLFLNH
Trigger: ATGGTTCAAAAACAAGTGCAAAGGCCCTTTATGAAC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTGCATAATTCTTCCTTaGTTCATAAAGGGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCCIILP*FIKGLC
Trigger: GCAAAGGCCCTTTATGAACAAAGGAAGAATTATGCA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TTTCCTTATTCCATCATCAACAGTGATCATAGCATCTTTCCGATCCAGGACAAATTGAAGAATCATATCTaGAGTCCACACTTTGCCCTT +
Preference number: 5 (lower is better)
Translates to: FPYSIINSDHSIFPIQDKLKNHI*SPHFAL
Trigger: AAGGGCAAAGTGTGGACTCAAGATATGATTCTTCAA...TTTGTCCTGGATCGGAAAGATGCTATGATCACTGTTGATGATGGAATAAGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536956.5
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTTGAAGAATCATATCTaGAGTCCACACTTTGCCCTT +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCLKNHI*SPHFAL
Trigger: AAGGGCAAAGTGTGGACTCAAGATATGATTCTTCAA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCAGCTCTGTCATCCACTaGAAGAATCATATCTTGAGT +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCSSVIH*KNHILS
Trigger: ACTCAAGATATGATTCTTCAAGTGGATGACAGAGCT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCATCTCCAGTTCATTCTTaGATTCTAAATCAATCAGGC +
Preference number: 5 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKASPVHS*ILNQSG
Trigger: GCCTGATTGATTTAGAATCAAAGAATGAACTGGAGA...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCTTGGCAGTGCTGGATaGTGTTTAAAGGAAAATTCT +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCLGSAG*CLKENS
Trigger: AGAATTTTCCTTTAAACACAATCCAGCACTGCCAAG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCAGTTGATAAAGATCTaGTTCCATTGTGGCTCCCAT +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTQLIKI*FHCGSH
Trigger: ATGGGAGCCACAATGGAACAAGATCTTTATCAACTG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCACAGATTCTGCCAGTaGATAAAGATCTTGTTCCAT +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCHRFCQ*IKILFH
Trigger: ATGGAACAAGATCTTTATCAACTGGCAGAATCTGTG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAAAAAGGCAGCTACAAAGTCATACTaGGATTTGGCATATTTCTTG +
Preference number: 5 (lower is better)
Translates to: DSKYCLLQTFQLTHVKKAATKSY*DLAYFL
Trigger: CAAGAAATATGCCAAATCCAAGTATGACTTTGTAGC...TGCCTTTTTCACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000644374.1
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTCGAACTTTCCACCATaGCTTCCGATCATCAAGTAT +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTSNFPP*LPIIKY
Trigger: ATACTTGATGATCGGAAGCAATGGTGGAAAGTTCGA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGCCATACTCCATCCTTaGTTTCTGTATAGTATGAGT +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCAILHP*FLYSMS
Trigger: ACTCATACTATACAGAAACAAAGGATGGAGTATGGC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTTTGACGTGTTATATTaGCTGGGACCTTTGACACAG +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTFDVLY*LGPLTQ
Trigger: CTGTGTCAAAGGTCCCAGCAAATATAACACGTCAAA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCAATACTCCAAGACTATaGACAGTCACAGGGTTGAAT +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCNTPRL*TVTGLN
Trigger: ATTCAACCCTGTGACTGTCAATAGTCTTGGAGTATT...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCTCAGTTCATCCTTATaGAGAGAGAAAAGTTGTGCA +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCLSSSL*REKSCA
Trigger: TGCACAACTTTTCTCTCTCAATAAGGATGAACTGAG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCCTCCAATGCAGCTTTTaGTACAGTGATTTGGCTATA +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCLQCSF*YSDLAI
Trigger: TATAGCCAAATCACTGTACAAAAAGCTGCATTGGAG...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGAATCATGGACAACATaGTTGCTTTGTTGCAGTGAA +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCESWTT*LLCCSE
Trigger: TTCACTGCAACAAAGCAACAATGTTGTCCATGATTC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTGTTCATAAAGGGCCTTaGCACTTGTTTTTGAACCAT +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTVHKGP*HLFLNH
Trigger: ATGGTTCAAAAACAAGTGCAAAGGCCCTTTATGAAC...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTGCATAATTCTTCCTTaGTTCATAAAGGGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTCIILP*FIKGLC
Trigger: GCAAAGGCCCTTTATGAACAAAGGAAGAATTATGCA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGTTGAAGAATCATATCTaGAGTCCACACTTTGCCCTT +
Preference number: 5 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVLKNHI*SPHFAL
Trigger: AAGGGCAAAGTGTGGACTCAAGATATGATTCTTCAA...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTTGAAGAATCATATCTaGAGTCCACACTTTGCCCTT +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTLKNHI*SPHFAL
Trigger: AAGGGCAAAGTGTGGACTCAAGATATGATTCTTCAA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTAGCTCTGTCATCCACTaGAAGAATCATATCTTGAGT +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTSSVIH*KNHILS
Trigger: ACTCAAGATATGATTCTTCAAGTGGATGACAGAGCT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTCTCCAGTTCATTCTTaGATTCTAAATCAATCAGGC +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCSPVHS*ILNQSG
Trigger: GCCTGATTGATTTAGAATCAAAGAATGAACTGGAGA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCTTGGCAGTGCTGGATaGTGTTTAAAGGAAAATTCT +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTLGSAG*CLKENS
Trigger: AGAATTTTCCTTTAAACACAATCCAGCACTGCCAAG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCACAGATTCTGCCAGTaGATAAAGATCTTGTTCCAT +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTHRFCQ*IKILFH
Trigger: ATGGAACAAGATCTTTATCAACTGGCAGAATCTGTG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCGCTACAAAGTCATACTaGGATTTGGCATATTTCTTG +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCATKSY*DLAYFL
Trigger: CAAGAAATATGCCAAATCCAAGTATGACTTTGTAGC...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGAATACTCCAAGACTATaGACAGTCACAGGGTTGAAT +
Preference number: 5 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVNTPRL*TVTGLN
Trigger: ATTCAACCCTGTGACTGTCAATAGTCTTGGAGTATT...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTAATACTCCAAGACTATaGACAGTCACAGGGTTGAAT +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTNTPRL*TVTGLN
Trigger: ATTCAACCCTGTGACTGTCAATAGTCTTGGAGTATT...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCTCAGTTCATCCTTATaGAGAGAGAAAAGTTGTGCA +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTLSSSL*REKSCA
Trigger: TGCACAACTTTTCTCTCTCAATAAGGATGAACTGAG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGCTCCAATGCAGCTTTTaGTACAGTGATTTGGCTATA +
Preference number: 5 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVLQCSF*YSDLAI
Trigger: TATAGCCAAATCACTGTACAAAAAGCTGCATTGGAG...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTCTCCAATGCAGCTTTTaGTACAGTGATTTGGCTATA +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTLQCSF*YSDLAI
Trigger: TATAGCCAAATCACTGTACAAAAAGCTGCATTGGAG...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTGAATCATGGACAACATaGTTGCTTTGTTGCAGTGAA +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTESWTT*LLCCSE
Trigger: TTCACTGCAACAAAGCAACAATGTTGTCCATGATTC...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp GTTTTAATAAAAATAATGGGCCTAGAAGCAAATCCTGTGCTCACTCAGGTTTGCTCCATAGATTTATATTaGCATGTCCAAGGTATGGCT +
Preference number: 5 (lower is better)
Translates to: VLIKIMGLEANPVLTQVCSIDLY*HVQGMA
Trigger: AGCCATACCTTGGACATGCAAATATAAATCTATGGA...GCAAACCTGAGTGAGCACAGGATTTGCTTCTAGGCCCATTATTTTTATTAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp TTATTAACAGACAGCAAATACTGTTTATTGCAGACTTTCCAGCTGACTCATGTGTCTCCAGTTCATTCTTaGATTCTAAATCAATCAGGC +
Preference number: 5 (lower is better)
Translates to: LLTDSKYCLLQTFQLTHVSPVHS*ILNQSG
Trigger: GCCTGATTGATTTAGAATCAAAGAATGAACTGGAGA...CACATGAGTCAGCTGGAAAGTCTGCAATAAACAGTATTTGCTGTCTGTTAATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTCTCCAGTTCATTCTTaGATTCTAAATCAATCAGGC +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTSPVHS*ILNQSG
Trigger: GCCTGATTGATTTAGAATCAAAGAATGAACTGGAGA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp AAGGTTAAATCCGTGTTTAAACTTTTGGAAACAGTCAAGAAATTCATCAGGAGGCACAGATTCTGCCAGTaGATAAAGATCTTGTTCCAT +
Preference number: 5 (lower is better)
Translates to: KVKSVFKLLETVKKFIRRHRFCQ*IKILFH
Trigger: ATGGAACAAGATCTTTATCAACTGGCAGAATCTGTG...CCTCCTGATGAATTTCTTGACTGTTTCCAAAAGTTTAAACACGGATTTAACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTGCTACAAAGTCATACTaGGATTTGGCATATTTCTTG +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTATKSY*DLAYFL
Trigger: CAAGAAATATGCCAAATCCAAGTATGACTTTGTAGC...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTCCATAGATTTATATTaGCATGTCCAAGGTATGGCT +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTSIDLY*HVQGMA
Trigger: AGCCATACCTTGGACATGCAAATATAAATCTATGGA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS-3UTR CAA 90 bp ATTTTGAATCATGGACAACATTGTTGCTTTGTTGCAGTGAATAACTCCACCACTTTTCAAGTTCTCACGTaGTTTGACTCGAATCTTGTA +
Preference number: 5 (lower is better)
Translates to: ILNHGQHCCFVAVNNSTTFQVLT*FDSNLV
Trigger: TACAAGATTCGAGTCAAACAACGTGAGAACTTGAAA...AGTGGTGGAGTTATTCACTGCAACAAAGCAACAATGTTGTCCATGATTCAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
CDS GCA 72 bp CCCAGCCAGTCGTCCGCGAGCCGCGGAGCCGCCTTCTaGACCCAGCTAAAGAGCAGCGATCTCCGAGGCGAG +
Preference number: 6 (lower is better)
Translates to: PSQSSASRGAAF*TQLKSSDLRGE
Trigger: CTCGCCTCGGAGATCGCTGCTCTTTAGCTGGGTGCAGAAGGCGGCTCCGCGGCTCGCGGACGACTGGCTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000536793.5
ENST00000536956.5
ENST00000543468.5
ENST00000543523.5
ENST00000544064.1
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000647224.1
CDS GCA 72 bp CCCAGGCTGGAGTGCGGTGGCGCGAGCACCGCTTACTaGGGTGTCGACCTCTCGGGCTCGAGTTATCCTCCC +
Preference number: 6 (lower is better)
Translates to: PRLECGGASTAY*GVDLSGSSYPP
Trigger: GGGAGGATAACTCGAGCCCGAGAGGTCGACACCGCAGTAAGCGGTGCTCGCGCCACCGCACTCCAGCCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646918.1
CDS GCA 72 bp ACAGTCCCCTTGGTCGGCTGCCCATGCAGACCAGGCTaGCACTCGACTTCTAACATCCACCTGGGTGACGGT +
Preference number: 6 (lower is better)
Translates to: TVPLVGCPCRPG*HSTSNIHLGDG
Trigger: ACCGTCACCCAGGTGGATGTTAGAAGTCGAGTGGCAGCCTGGTCTGCATGGGCAGCCGACCAAGGGGACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508018.2
CDS GCA 72 bp CTAGTCCCCTTGGTCGGCTGCCCATGCAGACCAGGCTaGCACTCGACTTCTAACATCCACCTGGGTGACGGT +
Preference number: 6 (lower is better)
Translates to: LVPLVGCPCRPG*HSTSNIHLGDG
Trigger: ACCGTCACCCAGGTGGATGTTAGAAGTCGAGTGGCAGCCTGGTCTGCATGGGCAGCCGACCAAGGGGACTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546261.1
CDS GCA 72 bp AAAGTCCCCTTGGTCGGCTGCCCATGCAGACCAGGCTaGCACTCGACTTCTAACATCCACCTGGGTGACGGT +
Preference number: 6 (lower is better)
Translates to: KVPLVGCPCRPG*HSTSNIHLGDG
Trigger: ACCGTCACCCAGGTGGATGTTAGAAGTCGAGTGGCAGCCTGGTCTGCATGGGCAGCCGACCAAGGGGACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS GCA 72 bp CTAGGAAGACTCACAGTCCCCTTGGTCGGCTGCCCATaGAGACCAGGCTGCCACTCGACTTCTAACATCCAC +
Preference number: 6 (lower is better)
Translates to: LGRLTVPLVGCP*RPGCHSTSNIH
Trigger: GTGGATGTTAGAAGTCGAGTGGCAGCCTGGTCTGCATGGGCAGCCGACCAAGGGGACTGTGAGTCTTCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508018.2
CDS CCA 72 bp GGGCTGCTCGGCAGGTACACAGCTGACGCTGGTCCTTaGACTTATGGGAGTGGGAACAACTTTCAACTCGGC +
Preference number: 6 (lower is better)
Translates to: GLLGRYTADAGP*TYGSGNNFQLG
Trigger: GCCGAGTTGAAAGTTGTTCCCACTCCCATAAGTCCAAGGACCAGCGTCAGCTGTGTACCTGCCGAGCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646918.1
CDS TCA 72 bp ACAGTCCTCAGTAGGGCTGCTCGGCAGGTACACAGCTaGCGCTGGTCCTTGGACTTATGGGAGTGGGAACAA +
Preference number: 6 (lower is better)
Translates to: TVLSRAARQVHS*RWSLDLWEWEQ
Trigger: TTGTTCCCACTCCCATAAGTCCAAGGACCAGCGTCAGCTGTGTACCTGCCGAGCAGCCCTACTGAGGACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646918.1
CDS GCA 72 bp CCTTGGTTTCTCAAAGTCCCCTTGGTCGGCTGCCCATaGAGACCAGGCTGCCACTCGACTTCTAACATCCAC +
Preference number: 6 (lower is better)
Translates to: PWFLKVPLVGCP*RPGCHSTSNIH
Trigger: GTGGATGTTAGAAGTCGAGTGGCAGCCTGGTCTGCATGGGCAGCCGACCAAGGGGACTTTGAGAAACCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS GCA 72 bp TCCAAAAAGGGACTAGTCCCCTTGGTCGGCTGCCCATaGAGACCAGGCTGCCACTCGACTTCTAACATCCAC +
Preference number: 6 (lower is better)
Translates to: SKKGLVPLVGCP*RPGCHSTSNIH
Trigger: GTGGATGTTAGAAGTCGAGTGGCAGCCTGGTCTGCATGGGCAGCCGACCAAGGGGACTAGTCCCTTTTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546261.1
CDS TCA 72 bp CGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCATaGTACTGCCTTGGTTTCTCAACTCAGGGCGTCGGG +
Preference number: 6 (lower is better)
Translates to: RAAIISGVSSCS*YCLGFSTQGVG
Trigger: CCCGACGCCCTGAGTTGAGAAACCAAGGCAGTATCATGAGCAGGAAGAAACACCTGAGATGATGGCAGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS GCA 72 bp ATACTGCCTTGGTTTCTCAAAGTCCCCTTGGTCGGCTaGCCATGCAGACCAGGCTGCCACTCGACTTCTAAC +
Preference number: 6 (lower is better)
Translates to: ILPWFLKVPLVG*PCRPGCHSTSN
Trigger: GTTAGAAGTCGAGTGGCAGCCTGGTCTGCATGGGCAGCCGACCAAGGGGACTTTGAGAAACCAAGGCAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS GCA 72 bp AACTTGTCCAAAAAGGGACTAGTCCCCTTGGTCGGCTaGCCATGCAGACCAGGCTGCCACTCGACTTCTAAC +
Preference number: 6 (lower is better)
Translates to: NLSKKGLVPLVG*PCRPGCHSTSN
Trigger: GTTAGAAGTCGAGTGGCAGCCTGGTCTGCATGGGCAGCCGACCAAGGGGACTAGTCCCTTTTTGGACAAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546261.1
CDS GCA 72 bp TTAATTCTAGGAAGACTCACAGTCCCCTTGGTCGGCTaGCCATGCAGACCAGGCTGCCACTCGACTTCTAAC +
Preference number: 6 (lower is better)
Translates to: LILGRLTVPLVG*PCRPGCHSTSN
Trigger: GTTAGAAGTCGAGTGGCAGCCTGGTCTGCATGGGCAGCCGACCAAGGGGACTGTGAGTCTTCCTAGAATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508018.2
CDS CAA 72 bp TCATCTCAGGTGTTTCTTCCTGCTCATGATACTGCCTaGGTTTCTCAACTCAGGGCGTCGGGCCGCCTCTTC +
Preference number: 6 (lower is better)
Translates to: SSQVFLPAHDTA*VSQLRASGRLF
Trigger: GAAGAGGCGGCCCGACGCCCTGAGTTGAGAAACCAAGGCAGTATCATGAGCAGGAAGAAACACCTGAGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543468.5
CDS TCA 72 bp CGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCATaGTACTGCCTTGGTTTCTCAAAGTCCCCTTGGTCG +
Preference number: 6 (lower is better)
Translates to: RAAIISGVSSCS*YCLGFSKSPWS
Trigger: CGACCAAGGGGACTTTGAGAAACCAAGGCAGTATCATGAGCAGGAAGAAACACCTGAGATGATGGCAGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000281172.10
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS TCA 72 bp CGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCATaGTACTGCCTTGGTTTCTCAACATTTGCCAAAGGG +
Preference number: 6 (lower is better)
Translates to: RAAIISGVSSCS*YCLGFSTFAKG
Trigger: CCCTTTGGCAAATGTTGAGAAACCAAGGCAGTATCATGAGCAGGAAGAAACACCTGAGATGATGGCAGCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542903.1
CDS TCA 72 bp GAGCTCATGAAGACTTCCCACTACAGACAATTAGGCTaGACAGAAGCTAAGGACAGCACCTTGGCAGGATCC +
Preference number: 6 (lower is better)
Translates to: ELMKTSHYRQLG*TEAKDSTLAGS
Trigger: GGATCCTGCCAAGGTGCTGTCCTTAGCTTCTGTTCAGCCTAATTGTCTGTAGTGGGAAGTCTTCATGAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646828.1
CDS CCA 72 bp CAACTTCTTAGACTCCTACTCACTGCTCGGAGACTTTaGCATCCTGGCTGTCTTTTATGCTCCCATACTGCC +
Preference number: 6 (lower is better)
Translates to: QLLRLLLTARRL*HPGCLLCSHTA
Trigger: GGCAGTATGGGAGCATAAAAGACAGCCAGGATGCCAAAGTCTCCGAGCAGTGAGTAGGAGTCTAAGAAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646918.1
ENST00000647087.1
CDS GCA 72 bp GGCTCTGAAGGTGATAGAGATTCAGGAGTCAAGGAATaGAGGCAACCTCTAGAACCTGCTTTCCCATTTGCT +
Preference number: 6 (lower is better)
Translates to: GSEGDRDSGVKE*RQPLEPAFPFA
Trigger: AGCAAATGGGAAAGCAGGTTCTAGAGGTTGCCTGCATTCCTTGACTCCTGAATCTCTATCACCTTCAGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646918.1
CDS CAA 72 bp CACTGTCCTGACAACCTTTCCATGAATATGACAAACTaGTCCAAAAAGGGACTAGTCCCCTTGGTCGGCTGC +
Preference number: 6 (lower is better)
Translates to: HCPDNLSMNMTN*SKKGLVPLVGC
Trigger: GCAGCCGACCAAGGGGACTAGTCCCTTTTTGGACAAGTTTGTCATATTCATGGAAAGGTTGTCAGGACAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546261.1
CDS TCA 72 bp CGGGCTGCCATCATCTCAGGTGTTTCTTCCTGCTCATaGTACTGCCTTGGTTTCTCAACTATAGAAAGGACA +
Preference number: 6 (lower is better)
Translates to: RAAIISGVSSCS*YCLGFSTIERT
Trigger: TGTCCTTTCTATAGTTGAGAAACCAAGGCAGTATCATGAGCAGGAAGAAACACCTGAGATGATGGCAGCCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535734.5
CDS TCA 72 bp TCCATCTGGTCCATAAAGGGCCTTTGCACTTGTTTTTaGACCATGTTCTCTGTCCGTCTGGGAAAAGGTAGG +
Preference number: 6 (lower is better)
Translates to: SIWSIKGLCTCF*TMFSVRLGKGR
Trigger: CCTACCTTTTCCCAGACGGACAGAGAACATGGTTCAAAAACAAGTGCAAAGGCCCTTTATGGACCAGATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642939.1
CDS CAA 72 bp CACACTGGAAGAGATGAAGATCTGGCTTGTTCTGGGTaGGCTCTTTGCACACCAGTGCAAGAACTGAATCAT +
Preference number: 6 (lower is better)
Translates to: HTGRDEDLACSG*ALCTPVQELNH
Trigger: ATGATTCAGTTCTTGCACTGGTGTGCAAAGAGCCAACCCAGAACAAGCCAGATCTTCATCTCTTCCAGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000281172.10
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS TCA 72 bp TCCAGGACAAAGGTAGTCAAGTGTTCAACACGGTATTaGGATATATCTGACACACTGCTGACACTGTCCCGT +
Preference number: 6 (lower is better)
Translates to: SRTKVVKCSTRY*DISDTLLTLSR
Trigger: ACGGGACAGTGTCAGCAGTGTGTCAGATATATCTCAATACCGTGTTGAACACTTGACTACCTTTGTCCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000281172.10
ENST00000535752.5
ENST00000536956.5
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000546311.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS TCA 72 bp ATTAGGTTTGCCTTAACCTCATCACACTGGAAGAGATaGAGATCTGGCTTGTTCTGGGTTGGCTCTTTGCAC +
Preference number: 6 (lower is better)
Translates to: IRFALTSSHWKR*RSGLFWVGSLH
Trigger: GTGCAAAGAGCCAACCCAGAACAAGCCAGATCTTCATCTCTTCCAGTGTGATGAGGTTAAGGCAAACCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000281172.10
ENST00000508018.2
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS CCA 72 bp TGGTTTCTCAACATTTGCCAAAGGGAACACCTCCACTaGATACACAAGTCAAAACTGTGCTCATCAGCCATG +
Preference number: 6 (lower is better)
Translates to: WFLNICQREHLH*IHKSKLCSSAM
Trigger: CATGGCTGATGAGCACAGTTTTGACTTGTGTATCCAGTGGAGGTGTTCCCTTTGGCAAATGTTGAGAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542903.1
CDS CAA 90 bp GATAACATTGCTGTACCCAATTTGTTTCTTTTCACTCCTGGATATTaGGTCCTCTCCGGGTTTGTGTCACTAAGCTATCCTGGATCCTGC +
Preference number: 6 (lower is better)
Translates to: DNIAVPNLFLFTPGY*VLSGFVSLSYPGSC
Trigger: GCAGGATCCAGGATAGCTTAGTGACACAAACCCGGAGAGGACCAAATATCCAGGAGTGAAAAGAAACAAATTGGGTACAGCAATGTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642278.1
CDS CAA 90 bp TCACCCAGAGCCCTATCATTTACAGAGAACCAGGTAACAGTTACCTaGCAGTCTTTTTGCCTACAAGTGGTTTTCTTTCCTCCCTTCCTT +
Preference number: 6 (lower is better)
Translates to: SPRALSFTENQVTVT*QSFCLQVVFFPPFL
Trigger: AAGGAAGGGAGGAAAGAAAACCACTTGTAGGCAAAAAGACTGCAAGGTAACTGTTACCTGGTTCTCTGTAAATGATAGGGCTCTGGGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642278.1
CDS GCA 72 bp AGGGAACACCTCCACTGGATACACAAGTCAAAACTGTaGTCATCAGCCATGAAATGCATCCTTGTCAATACT +
Preference number: 6 (lower is better)
Translates to: REHLHWIHKSKL*SSAMKCILVNT
Trigger: AGTATTGACAAGGATGCATTTCATGGCTGATGAGCACAGTTTTGACTTGTGTATCCAGTGGAGGTGTTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542903.1
CDS CAA 72 bp GCTGTACCCAATTTGTTTCTTTTCACTCCTGGATATTaGGTCCTCTCCGGGTTTGTGTCACTAAGCTATCCT +
Preference number: 6 (lower is better)
Translates to: AVPNLFLFTPGY*VLSGFVSLSYP
Trigger: AGGATAGCTTAGTGACACAAACCCGGAGAGGACCAAATATCCAGGAGTGAAAAGAAACAAATTGGGTACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642278.1
CDS TCA 72 bp GGTAGTCAAGTGTTCAACACGGTATTGAGATATATCTaGCACACTGCTGACACTGTCCCGTGCATAATTCTT +
Preference number: 6 (lower is better)
Translates to: GSQVFNTVLRYI*HTADTVPCIIL
Trigger: AAGAATTATGCACGGGACAGTGTCAGCAGTGTGTCAGATATATCTCAATACCGTGTTGAACACTTGACTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000281172.10
ENST00000535752.5
ENST00000536956.5
ENST00000543468.5
ENST00000543523.5
ENST00000543612.5
ENST00000546311.5
ENST00000642278.1
ENST00000642939.1
ENST00000644374.1
ENST00000645775.1
ENST00000646123.1
ENST00000646828.1
ENST00000646918.1
ENST00000647087.1
ENST00000647224.1
CDS TCA 72 bp AAAGAATGGAGACGTATTTCAAGTTCTCACGTTGTTTaGCTCGAATCTTGTAGACGGTGTTTGCTCACGAGC +
Preference number: 6 (lower is better)
Translates to: KEWRRISSSHVV*LESCRRCLLTS
Trigger: GCTCGTGAGCAAACACCGTCTACAAGATTCGAGTCAAACAACGTGAGAACTTGAAATACGTCTCCATTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535752.5
ENST00000647087.1
CDS TCA 72 bp AGGAAATACTCCTCTAAGCAATCGTCCAGGCAATATTaGGAGGCCATTCCACTCAGTTTACTTATGTGCCAA +
Preference number: 6 (lower is better)
Translates to: RKYSSKQSSRQY*EAIPLSLLMCQ
Trigger: TTGGCACATAAGTAAACTGAGTGGAATGGCCTCTCAATATTGCCTGGACGATTGCTTAGAGGAGTATTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543612.5
CDS TCA 72 bp AGGCAGGACATACCCCAGCTTTATGGGCCAAGGGGGTaGAAGCATGAACAAATATTGATTATTAAGTTTCAG +
Preference number: 6 (lower is better)
Translates to: RQDIPQLYGPRG*KHEQILIIKFQ
Trigger: CTGAAACTTAATAATCAATATTTGTTCATGCTTTCACCCCCTTGGCCCATAAAGCTGGGGTATGTCCTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642278.1
CDS TCA 72 bp AGACAGTGTGGTGATCCCTTGAAGACCGTAAGTGAATaGACGAGAGTACTAAGGAAAAAGAATGGAGACGTA +
Preference number: 6 (lower is better)
Translates to: RQCGDPLKTVSE*TRVLRKKNGDV
Trigger: TACGTCTCCATTCTTTTTCCTTAGTACTCTCGTTCATTCACTTACGGTCTTCAAGGGATCACCACACTGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646828.1
CDS CCA 72 bp TTTCCCATTTGCTCCACAGTTGTGGCTTTCACATACTaGAAGAGGTCCATGAATCTTTCCAACTTCTTAGAC +
Preference number: 6 (lower is better)
Translates to: FPICSTVVAFTY*KRSMNLSNFLD
Trigger: GTCTAAGAAGTTGGAAAGATTCATGGACCTCTTCCAGTATGTGAAAGCCACAACTGTGGAGCAAATGGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000646918.1
ENST00000647087.1
CDS CAA 72 bp CCCTTGAAGACCTTAAGGTTAAAAATGTATCCTAGATaGTACGGGAGGGTCCAATGTAATCACCAGGATCCT +
Preference number: 6 (lower is better)
Translates to: PLKTLRLKMYPR*YGRVQCNHQDP
Trigger: AGGATCCTGGTGATTACATTGGACCCTCCCGTACAATCTAGGATACATTTTTAACCTTAAGGTCTTCAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545999.1
CDS CAA 90 bp AGAGTACTAAGGAAAAAGAATGGAGACGTATTTCAAGTTCTCACGTaGTTTGACTCGAATCTTGTAGACGGTGTTTGCTCACGAGCACTG +
Preference number: 6 (lower is better)
Translates to: RVLRKKNGDVFQVLT*FDSNLVDGVCSRAL
Trigger: CAGTGCTCGTGAGCAAACACCGTCTACAAGATTCGAGTCAAACAACGTGAGAACTTGAAATACGTCTCCATTCTTTTTCCTTAGTACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535752.5
ENST00000647087.1
CDS TCA 72 bp AAAGAATGGAGACGTATTTCAAGTTCTCACGTTGTTTaGCTCGAATCTTGTAGACGGTGTTTGACAGCGGAA +
Preference number: 6 (lower is better)
Translates to: KEWRRISSSHVV*LESCRRCLTAE
Trigger: TTCCGCTGTCAAACACCGTCTACAAGATTCGAGTCAAACAACGTGAGAACTTGAAATACGTCTCCATTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646918.1
CDS CAA 90 bp TGGAATGGCCTTTTCTTTCTTCTAGATAACATTGCTGTACCCAATTaGTTTCTTTTCACTCCTGGATATTTGGTCCTCTCCGGGTTTGTG +
Preference number: 6 (lower is better)
Translates to: WNGLFFLLDNIAVPN*FLFTPGYLVLSGFV
Trigger: CACAAACCCGGAGAGGACCAAATATCCAGGAGTGAAAAGAAACAAATTGGGTACAGCAATGTTATCTAGAAGAAAGAAAAGGCCATTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642278.1
CDS CAA 90 bp GTGTCTTTCACTTGTGTGTTCTTAAGGTTAAAAATGTATCCTAGATaGTACGGGAGGGTCCAATGTAATCACCAGGATCCTTTAAGCATG +
Preference number: 6 (lower is better)
Translates to: VSFTCVFLRLKMYPR*YGRVQCNHQDPLSM
Trigger: CATGCTTAAAGGATCCTGGTGATTACATTGGACCCTCCCGTACAATCTAGGATACATTTTTAACCTTAAGAACACACAAGTGAAAGACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646918.1
CDS CAA 72 bp AGGAAAAAGAATGGAGACGTATTTCAAGTTCTCACGTaGTTTGACTCGAATCTTGTAGACGGTGTTTGCTCA +
Preference number: 6 (lower is better)
Translates to: RKKNGDVFQVLT*FDSNLVDGVCS
Trigger: TGAGCAAACACCGTCTACAAGATTCGAGTCAAACAACGTGAGAACTTGAAATACGTCTCCATTCTTTTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535752.5
ENST00000647087.1