RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPS15L1 (Homo sapiens)

Ensembl gene IDs: ENSG00000127527

Ensembl transcript IDs: ENST00000248070.10, ENST00000455140.7, ENST00000535753.6, ENST00000592031.5, ENST00000593760.5, ENST00000594851.5, ENST00000594975.5, ENST00000595845.1, ENST00000596037.5, ENST00000596151.1, ENST00000597559.5, ENST00000597937.5, ENST00000599790.1, ENST00000602009.5, ENST00000602022.5, ENST00000602151.1

Found 1546 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCTACACACGGCCCTCGCCTAGGCGGCAGGCATGTCAGCCTTGCTaGGCGCGATGGCCAGTTCCAGGTCCTCCTGCTCCTGCCGCCGCA +
Preference number: 1 (lower is better)
Translates to: AYTRPSPRRQACQPC*ARWPVPGPPAPAAA
Trigger: TGCGGCGGCAGGAGCAGGAGGACCTGGAACTGGCCATCGCGCTCAGCAAGGCTGACATGCCTGCCGCCTAGGCGAGGGCCGTGTGTAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602022.5
3UTR CCA 90 bp GACGGGGACGGCGCCAGGGAACACAGTCTTCTTTCTCTTGGAGGGTaGGATGAGGGACGGGGGCAGGGCGGAGGGCACGGGCTCCTTCTC +
Preference number: 1 (lower is better)
Translates to: DGDGAREHSLLSLGG*DEGRGQGGGHGLLL
Trigger: GAGAAGGAGCCCGTGCCCTCCGCCCTGCCCCCGTCCCTCATCCCACCCTCCAAGAGAAAGAAGACTGTGTTCCCTGGCGCCGTCCCCGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000593760.5
3UTR CCA 90 bp CTGCCAGGGAGACGCCTTCGCTCAGGTTGGCCAGGTCGGTCAGGCTaGCACCATGGGCTCCATCGAGCACCTGGTCATACTGCTCCAGGC +
Preference number: 1 (lower is better)
Translates to: LPGRRLRSGWPGRSG*HHGLHRAPGHTAPG
Trigger: GCCTGGAGCAGTATGACCAGGTGCTCGATGGAGCCCATGGTGCCAGCCTGACCGACCTGGCCAACCTGAGCGAAGGCGTCTCCCTGGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR CCA 90 bp AGGGAGGAGCCCTGGGAGAGAGGGTGGCAGCACGGAGAGAGCTGCTaGAGGCAGCAGAGCACCAAGGAAACATCCAGACATGCGCGGCCC +
Preference number: 1 (lower is better)
Translates to: REEPWERGWQHGESC*RQQSTKETSRHARP
Trigger: GGGCCGCGCATGTCTGGATGTTTCCTTGGTGCTCTGCTGCCTCCAGCAGCTCTCTCCGTGCTGCCACCCTCTCTCCCAGGGCTCCTCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR TCA 90 bp AGTAGGGAGGAGGCGGGGAAGCCCTGGGTGCTTCCTCTCCTCGACTaGCCGCTGTGTGTTCGTCCCCAGAGGAAGAGCGGGAGGCAGTCA +
Preference number: 1 (lower is better)
Translates to: SREEAGKPWVLPLLD*PLCVRPQRKSGRQS
Trigger: TGACTGCCTCCCGCTCTTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGCTTCCCCGCCTCCTCCCTACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
3UTR GCA 90 bp TCGGTCAGGCTGGCACCATGGGCTCCATCGAGCACCTGGTCATACTaGTCCAGGCTCCTGTGGGCCTCCTGGCGGCTTTCATGCAGCTGG +
Preference number: 1 (lower is better)
Translates to: SVRLAPWAPSSTWSY*SRLLWASWRLSCSW
Trigger: CCAGCTGCATGAAAGCCGCCAGGAGGCCCACAGGAGCCTGGAGCAGTATGACCAGGTGCTCGATGGAGCCCATGGTGCCAGCCTGACCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR CCA 90 bp TTGGCCAGGTCGGTCAGGCTGGCACCATGGGCTCCATCGAGCACCTaGTCATACTGCTCCAGGCTCCTGTGGGCCTCCTGGCGGCTTTCA +
Preference number: 1 (lower is better)
Translates to: LARSVRLAPWAPSST*SYCSRLLWASWRLS
Trigger: TGAAAGCCGCCAGGAGGCCCACAGGAGCCTGGAGCAGTATGACCAGGTGCTCGATGGAGCCCATGGTGCCAGCCTGACCGACCTGGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR CCA 90 bp GAGACGCCTTCGCTCAGGTTGGCCAGGTCGGTCAGGCTGGCACCATaGGCTCCATCGAGCACCTGGTCATACTGCTCCAGGCTCCTGTGG +
Preference number: 1 (lower is better)
Translates to: ETPSLRLARSVRLAP*APSSTWSYCSRLLW
Trigger: CCACAGGAGCCTGGAGCAGTATGACCAGGTGCTCGATGGAGCCCATGGTGCCAGCCTGACCGACCTGGCCAACCTGAGCGAAGGCGTCTC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR CCA 90 bp CTCCAAAACTGCCCCTCTCTGCCAGGGAGACGCCTTCGCTCAGGTTaGCCAGGTCGGTCAGGCTGGCACCATGGGCTCCATCGAGCACCT +
Preference number: 1 (lower is better)
Translates to: LQNCPSLPGRRLRSG*PGRSGWHHGLHRAP
Trigger: AGGTGCTCGATGGAGCCCATGGTGCCAGCCTGACCGACCTGGCCAACCTGAGCGAAGGCGTCTCCCTGGCAGAGAGGGGCAGTTTTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR CCA 90 bp TGCGCGGCCCGGCCCATCCGCTCCCGGAACAGCACCAAGACGAAATaGGAAACTACATGTCCCCAGGTTCGAGGCTGCAGGGGCAGACTC +
Preference number: 1 (lower is better)
Translates to: CAARPIRSRNSTKTK*ETTCPQVRGCRGRL
Trigger: GAGTCTGCCCCTGCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCGTCTTGGTGCTGTTCCGGGAGCGGATGGGCCGGGCCGCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR GCA 90 bp TGTATATATAGACATCTGCACTGCCCCCTCTCTGGAACCCGCCCGTaGCCTGTCCCGCCTACACACGGCCCTCGCCTAGGCGGCAGGCAT +
Preference number: 1 (lower is better)
Translates to: CIYRHLHCPLSGTRP*PVPPTHGPRLGGRH
Trigger: ATGCCTGCCGCCTAGGCGAGGGCCGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGCAGATGTCTATATATACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602022.5
3UTR GCA 90 bp CCAGGACGCCTGAGGGACTGCTGCCACCGTGTGGCCAACGTTTTCTaGTTTCGGGAGATGGTTTCCCGCCTGCCCAGGAGCCTGTGCACT +
Preference number: 1 (lower is better)
Translates to: PGRLRDCCHRVANVF*FREMVSRLPRSLCT
Trigger: AGTGCACAGGCTCCTGGGCAGGCGGGAAACCATCTCCCGAAAGCAGAAAACGTTGGCCACACGGTGGCAGCAGTCCCTCAGGCGTCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR TCA 90 bp AGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCACCCTaGACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGACGG +
Preference number: 1 (lower is better)
Translates to: RRCDLSRSCSRVCSP*TSPRVPVLGVRWRR
Trigger: CCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
3UTR CCA 90 bp AGCCGCCTGCACTTGGCTGGAACCAACGTTGGCCATGAACAGATCTaGCGGGTGGGATGTTCTGCTGTCACACCAGGGGACCAGAGCCCC +
Preference number: 1 (lower is better)
Translates to: SRLHLAGTNVGHEQI*RVGCSAVTPGDQSP
Trigger: GGGGCTCTGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCCAACGTTGGTTCCAGCCAAGTGCAGGCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR TCA 90 bp GCCAACCCCAAGATGCTCAGAGACTCATCTGCTCCACCAGCTGAGTaGACACGGGGCAGCCAAGGGAGACTGCCCAGTCACACTGGCACC +
Preference number: 1 (lower is better)
Translates to: ANPKMLRDSSAPPAE*TRGSQGRLPSHTGT
Trigger: GGTGCCAGTGTGACTGGGCAGTCTCCCTTGGCTGCCCCGTGTTCACTCAGCTGGTGGAGCAGATGAGTCTCTGAGCATCTTGGGGTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR TCA 90 bp CGCTGCCAACCCCAAGATGCTCAGAGACTCATCTGCTCCACCAGCTaGGTGAACACGGGGCAGCCAAGGGAGACTGCCCAGTCACACTGG +
Preference number: 1 (lower is better)
Translates to: RCQPQDAQRLICSTS*VNTGQPRETAQSHW
Trigger: CCAGTGTGACTGGGCAGTCTCCCTTGGCTGCCCCGTGTTCACTCAGCTGGTGGAGCAGATGAGTCTCTGAGCATCTTGGGGTTGGCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR CCA 90 bp CATCCTGGCACTTCTGCCGGACGTCGCTCAGCATGTCTCGGAGCTTaGCCTTCTGCTGGTCCATCTCGTCCAGGCGGTCTTGAGCATCCT +
Preference number: 1 (lower is better)
Translates to: HPGTSAGRRSACLGA*PSAGPSRPGGLEHP
Trigger: AGGATGCTCAAGACCGCCTGGACGAGATGGACCAGCAGAAGGCCAAGCTCCGAGACATGCTGAGCGACGTCCGGCAGAAGTGCCAGGATG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR CCA 90 bp TTTACTTTGGAACGGGTCGCCGCTGTCAGCCCCGAGTGGCTGGAATaGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGCTTAC +
Preference number: 1 (lower is better)
Translates to: FTLERVAAVSPEWLE*IGGLGKVCGTKLAY
Trigger: GTAAGCCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGACAGCGGCGACCCGTTCCAAAGTAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR CCA 90 bp GCCCAGGCTCATCTGTGTAAACACACACCCTGCCTCGGTCAGAAGTaGGATCTGCTGCGCCGCCAGGGCACGCACACACGCGTCTTTGAA +
Preference number: 1 (lower is better)
Translates to: AQAHLCKHTPCLGQK*DLLRRQGTHTRVFE
Trigger: TTCAAAGACGCGTGTGTGCGTGCCCTGGCGGCGCAGCAGATCCCACTTCTGACCGAGGCAGGGTGTGTGTTTACACAGATGAGCCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR CCA 90 bp CTGCTTTCGGGAGATGGTTTCCCGCCTGCCCAGGAGCCTGTGCACTaGGCCCTAAATCTTCTGCCAGTCCCAAACCGTGTCACAGCGTGG +
Preference number: 1 (lower is better)
Translates to: LLSGDGFPPAQEPVH*ALNLLPVPNRVTAW
Trigger: CCACGCTGTGACACGGTTTGGGACTGGCAGAAGATTTAGGGCCCAGTGCACAGGCTCCTGGGCAGGCGGGAAACCATCTCCCGAAAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR TCA 90 bp CCAGGATTCAGCATGGCCACCTGTGCCAGGCTGCAAGGCCTGGTGTaGACGCGCAAAGTGGCAGCAAAAACAACAGACAGCCGCCTGCAC +
Preference number: 1 (lower is better)
Translates to: PGFSMATCARLQGLV*TRKVAAKTTDSRLH
Trigger: GTGCAGGCGGCTGTCTGTTGTTTTTGCTGCCACTTTGCGCGTTCACACCAGGCCTTGCAGCCTGGCACAGGTGGCCATGCTGAATCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR GCA 90 bp AGTACGGTGGCGACGGTGTGTGTGTGTATATATAGACATCTGCACTaGCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACAC +
Preference number: 1 (lower is better)
Translates to: STVATVCVCIYRHLH*PLSGTRPCPVPPTH
Trigger: GTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGCAGATGTCTATATATACACACACACACCGTCGCCACCGTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
3UTR GCA 90 bp ACCGTGTGGCCAACGTTTTCTGCTTTCGGGAGATGGTTTCCCGCCTaGCCAGGAGCCTGTGCACTGGGCCCTAAATCTTCTGCCAGTCCC +
Preference number: 1 (lower is better)
Translates to: TVWPTFSAFGRWFPA*PGACALGPKSSASP
Trigger: GGGACTGGCAGAAGATTTAGGGCCCAGTGCACAGGCTCCTGGGCAGGCGGGAAACCATCTCCCGAAAGCAGAAAACGTTGGCCACACGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR CCA 90 bp CCATGGGCTCCATCGAGCACCTGGTCATACTGCTCCAGGCTCCTGTaGGCCTCCTGGCGGCTTTCATGCAGCTGGGAAAGTTTGCTCCTT +
Preference number: 1 (lower is better)
Translates to: PWAPSSTWSYCSRLL*ASWRLSCSWESLLL
Trigger: AAGGAGCAAACTTTCCCAGCTGCATGAAAGCCGCCAGGAGGCCCACAGGAGCCTGGAGCAGTATGACCAGGTGCTCGATGGAGCCCATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR CCA 90 bp TGGCCACCTGTGCCAGGCTGCAAGGCCTGGTGTGAACGCGCAAAGTaGCAGCAAAAACAACAGACAGCCGCCTGCACTTGGCTGGAACCA +
Preference number: 1 (lower is better)
Translates to: WPPVPGCKAWCERAK*QQKQQTAACTWLEP
Trigger: TGGTTCCAGCCAAGTGCAGGCGGCTGTCTGTTGTTTTTGCTGCCACTTTGCGCGTTCACACCAGGCCTTGCAGCCTGGCACAGGTGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR TCA 90 bp AGGAAGAGGAGTCCACTTGCGACAACCAGAAACGACCAGGACGCCTaGGGGACTGCTGCCACCGTGTGGCCAACGTTTTCTGCTTTCGGG +
Preference number: 1 (lower is better)
Translates to: RKRSPLATTRNDQDA*GTAATVWPTFSAFG
Trigger: CCCGAAAGCAGAAAACGTTGGCCACACGGTGGCAGCAGTCCCTCAGGCGTCCTGGTCGTTTCTGGTTGTCGCAAGTGGACTCCTCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR GCA 90 bp TGGGGTGGCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTaGAAAGCCCGAGGCAGAGGCCTTAGAAGGTTTAGCTGCAGAGGA +
Preference number: 1 (lower is better)
Translates to: WGGPEAEDSTYRGEV*KARGRGLRRFSCRG
Trigger: TCCTCTGCAGCTAAACCTTCTAAGGCCTCTGCCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGCCACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
3UTR CCA 90 bp CACTGGGCCCTAAATCTTCTGCCAGTCCCAAACCGTGTCACAGCGTaGCATATGAGGGATGGAGGCCTTCTCCGTGTGCTGGAAGGAGGG +
Preference number: 1 (lower is better)
Translates to: HWALNLLPVPNRVTA*HMRDGGLLRVLEGG
Trigger: CCCTCCTTCCAGCACACGGAGAAGGCCTCCATCCCTCATATGCCACGCTGTGACACGGTTTGGGACTGGCAGAAGATTTAGGGCCCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR TCA 90 bp AACAACAGACAGCCGCCTGCACTTGGCTGGAACCAACGTTGGCCATaGACAGATCTGGCGGGTGGGATGTTCTGCTGTCACACCAGGGGA +
Preference number: 1 (lower is better)
Translates to: NNRQPPALGWNQRWP*TDLAGGMFCCHTRG
Trigger: TCCCCTGGTGTGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCCAACGTTGGTTCCAGCCAAGTGCAGGCGGCTGTCTGTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR TCA 90 bp CCAATAGGAAGTGAGACCGGCTCTGAAATCACAGCTGCATGTGTGTaGAGAGCCCCTGGTTTCAGGGCCCAAGGACAGGCAGAGGGCGGT +
Preference number: 1 (lower is better)
Translates to: PIGSETGSEITAACV*RAPGFRAQGQAEGG
Trigger: ACCGCCCTCTGCCTGTCCTTGGGCCCTGAAACCAGGGGCTCTTCACACACATGCAGCTGTGATTTCAGAGCCGGTCTCACTTCCTATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR GCA 90 bp TCCACTTGCGACAACCAGAAACGACCAGGACGCCTGAGGGACTGCTaGCACCGTGTGGCCAACGTTTTCTGCTTTCGGGAGATGGTTTCC +
Preference number: 1 (lower is better)
Translates to: STCDNQKRPGRLRDC*HRVANVFCFREMVS
Trigger: GGAAACCATCTCCCGAAAGCAGAAAACGTTGGCCACACGGTGGCAGCAGTCCCTCAGGCGTCCTGGTCGTTTCTGGTTGTCGCAAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR GCA 90 bp GAGTCCACTTGCGACAACCAGAAACGACCAGGACGCCTGAGGGACTaGTGCCACCGTGTGGCCAACGTTTTCTGCTTTCGGGAGATGGTT +
Preference number: 1 (lower is better)
Translates to: ESTCDNQKRPGRLRD*CHRVANVFCFREMV
Trigger: AACCATCTCCCGAAAGCAGAAAACGTTGGCCACACGGTGGCAGCAGTCCCTCAGGCGTCCTGGTCGTTTCTGGTTGTCGCAAGTGGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR CCA 90 bp CAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTaGAGTACGGTGGCGACGGTGTGTGTGTGTATATATAGACATCTG +
Preference number: 1 (lower is better)
Translates to: QPSLLTLNKPPSPGP*STVATVCVCIYRHL
Trigger: CAGATGTCTATATATACACACACACACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
3UTR CCA 90 bp TGCACTTGGCTGGAACCAACGTTGGCCATGAACAGATCTGGCGGGTaGGATGTTCTGCTGTCACACCAGGGGACCAGAGCCCCATACTGT +
Preference number: 1 (lower is better)
Translates to: CTWLEPTLAMNRSGG*DVLLSHQGTRAPYC
Trigger: ACAGTATGGGGCTCTGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCCAACGTTGGTTCCAGCCAAGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR TCA 90 bp GACTTCAGGGACTTGATGATGGTTTCCAGCTGGACTCGCCCAGCCTaGATGCTCTGCTCCAGCTGGGTTTCCTCCTGCTGCAATCGGTTC +
Preference number: 1 (lower is better)
Translates to: DFRDLMMVSSWTRPA*MLCSSWVSSCCNRF
Trigger: GAACCGATTGCAGCAGGAGGAAACCCAGCTGGAGCAGAGCATTCAGGCTGGGCGAGTCCAGCTGGAAACCATCATCAAGTCCCTGAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR GCA 90 bp TGGTGTGAACGCGCAAAGTGGCAGCAAAAACAACAGACAGCCGCCTaGACTTGGCTGGAACCAACGTTGGCCATGAACAGATCTGGCGGG +
Preference number: 1 (lower is better)
Translates to: WCERAKWQQKQQTAA*TWLEPTLAMNRSGG
Trigger: CCCGCCAGATCTGTTCATGGCCAACGTTGGTTCCAGCCAAGTGCAGGCGGCTGTCTGTTGTTTTTGCTGCCACTTTGCGCGTTCACACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR CCA 90 bp GAACGCGCAAAGTGGCAGCAAAAACAACAGACAGCCGCCTGCACTTaGCTGGAACCAACGTTGGCCATGAACAGATCTGGCGGGTGGGAT +
Preference number: 1 (lower is better)
Translates to: ERAKWQQKQQTAACT*LEPTLAMNRSGGWD
Trigger: ATCCCACCCGCCAGATCTGTTCATGGCCAACGTTGGTTCCAGCCAAGTGCAGGCGGCTGTCTGTTGTTTTTGCTGCCACTTTGCGCGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR GCA 90 bp GGTGAAGTCTGCAAAGCCCGAGGCAGAGGCCTTAGAAGGTTTAGCTaGAGAGGAGGGGACAAATGGGTCTTTTCCACTAAACGGGTCCCC +
Preference number: 1 (lower is better)
Translates to: GEVCKARGRGLRRFS*RGGDKWVFSTKRVP
Trigger: GGGGACCCGTTTAGTGGAAAAGACCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAAGGCCTCTGCCTCGGGCTTTGCAGACTTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
3UTR GCA 90 bp ATCTTGGACTTTGTTCTGGAAGCCAGGATTCAGCATGGCCACCTGTaGCAGGCTGCAAGGCCTGGTGTGAACGCGCAAAGTGGCAGCAAA +
Preference number: 1 (lower is better)
Translates to: ILDFVLEARIQHGHL*QAARPGVNAQSGSK
Trigger: TTTGCTGCCACTTTGCGCGTTCACACCAGGCCTTGCAGCCTGGCACAGGTGGCCATGCTGAATCCTGGCTTCCAGAACAAAGTCCAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR GCA 90 bp TCTGTGTTCTGTGATCACAAGTTGCGACCGCTGCCAACCCCAAGATaGTCAGAGACTCATCTGCTCCACCAGCTGAGTGAACACGGGGCA +
Preference number: 1 (lower is better)
Translates to: SVFCDHKLRPLPTPR*SETHLLHQLSEHGA
Trigger: TGCCCCGTGTTCACTCAGCTGGTGGAGCAGATGAGTCTCTGAGCATCTTGGGGTTGGCAGCGGTCGCAACTTGTGATCACAGAACACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR TCA 90 bp GAAGTGGGATCTGCTGCGCCGCCAGGGCACGCACACACGCGTCTTTaGAAACCTGAACAGAATCTCAAGTGCTTCTCGGAATCTGTGTTC +
Preference number: 1 (lower is better)
Translates to: EVGSAAPPGHAHTRL*KPEQNLKCFSESVF
Trigger: GAACACAGATTCCGAGAAGCACTTGAGATTCTGTTCAGGTTTTCAAAGACGCGTGTGTGCGTGCCCTGGCGGCGCAGCAGATCCCACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR CCA 90 bp GCTCCAGCTGGGTTTCCTCCTGCTGCAATCGGTTCAGCTCCGACTTaGCTCGGTTCAGATCGTCTTCCTGGGACTTTAAGTCAGATTCCT +
Preference number: 1 (lower is better)
Translates to: APAGFPPAAIGSAPT*LGSDRLPGTLSQIP
Trigger: AGGAATCTGACTTAAAGTCCCAGGAAGACGATCTGAACCGAGCCAAGTCGGAGCTGAACCGATTGCAGCAGGAGGAAACCCAGCTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR GCA 90 bp GGCGGTCTTGAGCATCCTGTTTCTGAGCCTCGAGCTCCTGCAAACTaGTTGTTTCCCGGTCTAGGTCATTTTGTAATTCCTGCACCTCGC +
Preference number: 1 (lower is better)
Translates to: GGLEHPVSEPRAPAN*LFPGLGHFVIPAPR
Trigger: GCGAGGTGCAGGAATTACAAAATGACCTAGACCGGGAAACAAGCAGTTTGCAGGAGCTCGAGGCTCAGAAACAGGATGCTCAAGACCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR GCA 90 bp GTCCAGGTCGGTCTTCAGGAATATCTCATCAAATCGCATCTTGTCTaGCACGGGCACCACCCAGTTCACTGTTGGCTGTGTTTGCTTGAG +
Preference number: 1 (lower is better)
Translates to: VQVGLQEYLIKSHLV*HGHHPVHCWLCLLE
Trigger: CTCAAGCAAACACAGCCAACAGTGAACTGGGTGGTGCCCGTGGCAGACAAGATGCGATTTGATGAGATATTCCTGAAGACCGACCTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR GCA 90 bp AGAATCTCAAGTGCTTCTCGGAATCTGTGTTCTGTGATCACAAGTTaGGACCGCTGCCAACCCCAAGATGCTCAGAGACTCATCTGCTCC +
Preference number: 1 (lower is better)
Translates to: RISSASRNLCSVITS*DRCQPQDAQRLICS
Trigger: GGAGCAGATGAGTCTCTGAGCATCTTGGGGTTGGCAGCGGTCGCAACTTGTGATCACAGAACACAGATTCCGAGAAGCACTTGAGATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR CCA 90 bp GTCATTCTGGAACGGGTCGCCTTTGAAGGGGTCAGCTCCTTTAAATaGGTCAGATTTGAAGGGGTCTTCTGTCTGGAAAGGATCCGGATG +
Preference number: 1 (lower is better)
Translates to: VILERVAFEGVSSFK*VRFEGVFCLERIRM
Trigger: CATCCGGATCCTTTCCAGACAGAAGACCCCTTCAAATCTGACCCATTTAAAGGAGCTGACCCCTTCAAAGGCGACCCGTTCCAGAATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR CCA 90 bp GGGTCAGCTCCTTTAAATGGGTCAGATTTGAAGGGGTCTTCTGTCTaGAAAGGATCCGGATGCAACTCTTGCGTGTTGTTGCTAAATAAC +
Preference number: 1 (lower is better)
Translates to: GSAPLNGSDLKGSSV*KGSGCNSCVLLLNN
Trigger: GTTATTTAGCAACAACACGCAAGAGTTGCATCCGGATCCTTTCCAGACAGAAGACCCCTTCAAATCTGACCCATTTAAAGGAGCTGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR GCA 90 bp AGAGGCCAATTCTTACTTGAAAGAGCAACACCCTGGGGCGCTGCTTaGCATTACTTCCTCATCTTTAGCAACACATTTGCTTTTCAAGGT +
Preference number: 1 (lower is better)
Translates to: RGQFLLERATPWGAA*HYFLIFSNTFAFQG
Trigger: ACCTTGAAAAGCAAATGTGTTGCTAAAGATGAGGAAGTAATGGCAAGCAGCGCCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR CCA 90 bp ACTGATCCAATTTTGGTTAAGTTTGAGAAGCCCTCTGAACTTGGGTaGTTGGCCCAATGTAAATACTTCCGCAGAGATGGAGGGCATTCA +
Preference number: 1 (lower is better)
Translates to: TDPILVKFEKPSELG*LAQCKYFRRDGGHS
Trigger: TGAATGCCCTCCATCTCTGCGGAAGTATTTACATTGGGCCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAACCAAAATTGGATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR CCA 90 bp ATCCAATTTTGGTTAAGTTTGAGAAGCCCTCTGAACTTGGGTGGTTaGCCCAATGTAAATACTTCCGCAGAGATGGAGGGCATTCAAAAC +
Preference number: 1 (lower is better)
Translates to: IQFWLSLRSPLNLGG*PNVNTSAEMEGIQN
Trigger: GTTTTGAATGCCCTCCATCTCTGCGGAAGTATTTACATTGGGCCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAACCAAAATTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR CCA 90 bp AGTAGAATGTGGGGTTTCCACAATGAGCAGAAACTGATCCAATTTTaGTTAAGTTTGAGAAGCCCTCTGAACTTGGGTGGTTGGCCCAAT +
Preference number: 1 (lower is better)
Translates to: SRMWGFHNEQKLIQF*LSLRSPLNLGGWPN
Trigger: ATTGGGCCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAACCAAAATTGGATCAGTTTCTGCTCATTGTGGAAACCCCACATTCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR CCA 90 bp CAAAATTTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCTaGGGCGCTGCTTGCCATTACTTCCTCATCTTTAGCAACACATTT +
Preference number: 1 (lower is better)
Translates to: QNFRRGQFLLERATP*GAACHYFLIFSNTF
Trigger: AAATGTGTTGCTAAAGATGAGGAAGTAATGGCAAGCAGCGCCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAAATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR TCA 90 bp AACAGCCAGGGAGCAAAGCGAGGAGTTCTGGCTTCTCGTAACTCATaGAGGATGAATGCTCATCGTTTAAATTTAGACGATAAAGCTGAT +
Preference number: 1 (lower is better)
Translates to: NSQGAKRGVLASRNS*RMNAHRLNLDDKAD
Trigger: ATCAGCTTTATCGTCTAAATTTAAACGATGAGCATTCATCCTTCATGAGTTACGAGAAGCCAGAACTCCTCGCTTTGCTCCCTGGCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR GCA 90 bp AATGGGTCAGATTTGAAGGGGTCTTCTGTCTGGAAAGGATCCGGATaGAACTCTTGCGTGTTGTTGCTAAATAACAAGGCTTTATTTTTG +
Preference number: 1 (lower is better)
Translates to: NGSDLKGSSVWKGSG*NSCVLLLNNKALFL
Trigger: CAAAAATAAAGCCTTGTTATTTAGCAACAACACGCAAGAGTTGCATCCGGATCCTTTCCAGACAGAAGACCCCTTCAAATCTGACCCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR GCA 90 bp GATTTGAAGGGGTCTTCTGTCTGGAAAGGATCCGGATGCAACTCTTaGGTGTTGTTGCTAAATAACAAGGCTTTATTTTTGAAAGGATCA +
Preference number: 1 (lower is better)
Translates to: DLKGSSVWKGSGCNS*VLLLNNKALFLKGS
Trigger: TGATCCTTTCAAAAATAAAGCCTTGTTATTTAGCAACAACACGCAAGAGTTGCATCCGGATCCTTTCCAGACAGAAGACCCCTTCAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR CCA 90 bp CCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGCCCTCGCCTAGGGCACTGCCCCCTCTCTaGAACCCGCCCGTGCCCTGT +
Preference number: 2 (lower is better)
Translates to: PLWNPPVPCPAYTRPSPRALPPL*NPPVPC
Trigger: ACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGC...CCTAGGCGAGGGCCGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602022.5
3UTR-3UTR GCA 90 bp CACACCCTGCCTCGGTCAGAAGTGGGATCTGCTGCGCCGCCAGGGCACGCACACCCCGAGGGGGCCTCATaGCTGGGGCACGCGTCTTCC +
Preference number: 2 (lower is better)
Translates to: HTLPRSEVGSAAPPGHAHPEGAS*LGHASS
Trigger: GGAAGACGCGTGCCCCAGGCATGAGGCCCCCTCGGG...GTGTGCGTGCCCTGGCGGCGCAGCAGATCCCACTTCTGACCGAGGCAGGGTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR-3UTR CCA 90 bp ATCTGCACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGAGGCGGGGAAGCCCTaGGTGCTTCCTCTCCTCGAC +
Preference number: 2 (lower is better)
Translates to: ICTAPSLEPARALSRLHTEAGKP*VLPLLD
Trigger: GTCGAGGAGAGGAAGCACCCAGGGCTTCCCCGCCTC...CGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGCAGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
3UTR-3UTR TCA 90 bp GGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGGGGGAGTGTCTGACTaGTGCGTGGGAGGGCGGGTG +
Preference number: 2 (lower is better)
Translates to: GLAAESAHPEQAPESRSLGGVSD*CVGGRV
Trigger: CACCCGCCCTCCCACGCATCAGTCAGACACTCCCCC...CAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGACC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
3UTR-3UTR CCA 90 bp ACACACCCTGCCTCGGTCAGAAGTGGGATCTGCTGCGCCGCCAGGGCACGCACAAGGGGGCCTCATGCCTaGGGCACGCGTCTTCCAGGT +
Preference number: 2 (lower is better)
Translates to: THPASVRSGICCAARARTRGPHA*GTRLPG
Trigger: ACCTGGAAGACGCGTGCCCCAGGCATGAGGCCCCCT...TGTGCGTGCCCTGGCGGCGCAGCAGATCCCACTTCTGACCGAGGCAGGGTGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR CAA 90 bp TGTGTTTGCTTGAGGCTGTGCTTGGGGGACAGGCTCCCTGTGCTGTaGAGGCTGCTGACGCTGCCGTGGGACGGCGTGGAGCGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: CVCLRLCLGDRLPVL*RLLTLPWDGVERRL
Trigger: CAGCCTCCGCTCCACGCCGTCCCACGGCAGCGTCAGCAGCCTCAACAGCACAGGGAGCCTGTCCCCCAAGCACAGCCTCAAGCAAACACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR CAA 90 bp GCTCCAAAACTGCCCCTCTCTGCCAGGGAGACGCCTTCGCTCAGGTaGGCCAGGTCGGTCAGGCTGGCACCATGGGCTCCATCGAGCACC +
Preference number: 2 (lower is better)
Translates to: APKLPLSARETPSLR*ARSVRLAPWAPSST
Trigger: GGTGCTCGATGGAGCCCATGGTGCCAGCCTGACCGACCTGGCCAACCTGAGCGAAGGCGTCTCCCTGGCAGAGAGGGGCAGTTTTGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR GCA 90 bp GAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCTCTGGAACCCGCCCGTaGCCTGTCCCGCCTACACAC +
Preference number: 2 (lower is better)
Translates to: ESAHPEQAPESRSLEYGGSGTRP*PVPPTH
Trigger: GTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGA...GCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
3UTR-3UTR GCA 90 bp CACACCCTGCCTCGGTCAGAAGTGGGATCTGCTGCGCCGCCAGGGCACGCACACGCAGCCAAGGGAGACTaGCCAGTCACACTGGCACCT +
Preference number: 2 (lower is better)
Translates to: HTLPRSEVGSAAPPGHAHAAKGD*PVTLAP
Trigger: AGGTGCCAGTGTGACTGGGCAGTCTCCCTTGGCTGC...GTGTGCGTGCCCTGGCGGCGCAGCAGATCCCACTTCTGACCGAGGCAGGGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR-3UTR CCA 90 bp ACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGACGGTGTGTGAGGCGGGGAAGCCCTaGGTGCTTCCTCTCCTCGAC +
Preference number: 2 (lower is better)
Translates to: TLNKPPSPGPWSTVATVCEAGKP*VLPLLD
Trigger: GTCGAGGAGAGGAAGCACCCAGGGCTTCCCCGCCTC...ACACACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
3UTR-3UTR TCA 90 bp GCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAACGAGTCTGCTCACCCTaGACAAGCCCCCGAGTCCCG +
Preference number: 2 (lower is better)
Translates to: ALGASSPRLTAVCSSPEERVCSP*TSPRVP
Trigger: CGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCG...TTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
3UTR-3UTR TCA 90 bp AGGCAGGACGGGGACGGCGCCAGGGAACACAGTCTTCTTTCTCTTGGAGGGTGGCTGCAGAGGGCGGTGTaGCCATCAGAGGGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: RQDGDGAREHSLLSLGGWLQRAV*PSEGCW
Trigger: CCAGCAGCCCTCTGATGGTCACACCGCCCTCTGCAG...CCACCCTCCAAGAGAAAGAAGACTGTGTTCCCTGGCGCCGTCCCCGTCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR TCA 90 bp GAACACGGGGCAGCCAAGGGAGACTGCCCAGTCACACTGGCACCTGGGGCACCTTGCAGGTGGAACTCGTaGGGAAAGCAGGCCCCTGCA +
Preference number: 2 (lower is better)
Translates to: EHGAAKGDCPVTLAPGAPCRWNS*GKQAPA
Trigger: TGCAGGGGCCTGCTTTCCTCACGAGTTCCACCTGCA...AGGTGCCCCAGGTGCCAGTGTGACTGGGCAGTCTCCCTTGGCTGCCCCGTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR-3UTR GCA 90 bp AGCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGATCTGGAACCCGCCCGTaGCCTGTCCCGCCTACACAC +
Preference number: 2 (lower is better)
Translates to: SPGCFLSSTDRCVFVPRGSGTRP*PVPPTH
Trigger: GTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGA...TCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
3UTR-3UTR CCA 90 bp GAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCCCCGAGTGGCTGGAATaGATCGGGGGCCTCGGGAAA +
Preference number: 2 (lower is better)
Translates to: ESAHPEQAPESRSLEYGGPEWLE*IGGLGK
Trigger: TTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG...GCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000602022.5
3UTR-3UTR TCA 90 bp ACACCACTGGGGGAGTGTCTGACTGATGCGTGGGAGGGCGGGTGGGGATGTCTGCTTCCTCTCCTCGACTaGCCGCTGTGTGTTCGTCCC +
Preference number: 2 (lower is better)
Translates to: TPLGECLTDAWEGGWGCLLPLLD*PLCVRP
Trigger: GGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAG...CAGACATCCCCACCCGCCCTCCCACGCATCAGTCAGACACTCCCCCAGTGGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
3UTR-3UTR TCA 90 bp GGGGGCCAGACACAAGAGACAGATGAGCTCGCCAGCAGTGCCTTCCCAGCAGCCCTGCAAGGCCTGGTGTaGACGCGCAAAGTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: GGQTQETDELASSAFPAALQGLV*TRKVAA
Trigger: TGCTGCCACTTTGCGCGTTCACACCAGGCCTTGCAG...GGCTGCTGGGAAGGCACTGCTGGCGAGCTCATCTGTCTCTTGTGTCTGGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR GCA 90 bp AAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGACTCAACTTACAAGCCCAGTGGGCCTCTaGAGAGGGCGGTGTGACCAT +
Preference number: 2 (lower is better)
Translates to: KLQAEGSGVARRRRTQLTSPVGL*RGRCDH
Trigger: ATGGTCACACCGCCCTCTGCAGAGGCCCACTGGGCT...TGTAAGTTGAGTCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR CCA 90 bp GCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCCCGAGGCAGCTGTCAGCCCCGAGTaGCTGGAATGGATCGGGGGC +
Preference number: 2 (lower is better)
Translates to: ARRRRTQLTEVKSAKPEAAVSPE*LEWIGG
Trigger: GCCCCCGATCCATTCCAGCCACTCGGGGCTGACAGC...TGCCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
3UTR-3UTR CCA 90 bp CATCCATGGCTCCAAAACTGCCCCTCTCTGCCAGGGAGACGCCTTCGCTCAGGTGCTGTCAGCCCCGAGTaGCTGGAATGGATCGGGGGC +
Preference number: 2 (lower is better)
Translates to: HPWLQNCPSLPGRRLRSGAVSPE*LEWIGG
Trigger: GCCCCCGATCCATTCCAGCCACTCGGGGCTGACAGC...ACCTGAGCGAAGGCGTCTCCCTGGCAGAGAGGGGCAGTTTTGGAGCCATGGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR TCA 90 bp AAGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCAGGGGGAGTGTCTGACTaGTGCGTGGGAGGGCGGGTG +
Preference number: 2 (lower is better)
Translates to: KGFPRRCDLSRSCSRVCSGGVSD*CVGGRV
Trigger: CACCCGCCCTCCCACGCATCAGTCAGACACTCCCCC...TGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
3UTR-3UTR TCA 90 bp CCTGTCCCGCCTACACACGGCCCTCGCCTAGGCGGCAGGCATGTCAGCCTTGCTCATTGCCAAAAGAGGTaGAGTCTGCAAAGCCCGAGG +
Preference number: 2 (lower is better)
Translates to: PVPPTHGPRLGGRHVSLAHCQKR*SLQSPR
Trigger: CCTCGGGCTTTGCAGACTTCACCTCTTTTGGCAATG...AGCAAGGCTGACATGCCTGCCGCCTAGGCGAGGGCCGTGTGTAGGCGGGACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602022.5
3UTR-3UTR TCA 90 bp GGAGCCTGTGCACTGGGCCCTAAATCTTCTGCCAGTCCCAAACCGTGTCACAGCGCTCCACCAGCTGAGTaGACACGGGGCAGCCAAGGG +
Preference number: 2 (lower is better)
Translates to: GACALGPKSSASPKPCHSAPPAE*TRGSQG
Trigger: CCCTTGGCTGCCCCGTGTTCACTCAGCTGGTGGAGC...GCTGTGACACGGTTTGGGACTGGCAGAAGATTTAGGGCCCAGTGCACAGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR-3UTR GCA 90 bp GCTGGGCGGTTTAGGCCGTGGAGGAGCAGGTTTCTTCGGAGGCAGAGCAGGAGTCGGAGCTTGGCCTTCTaGTGGTCCATCTCGTCCAGG +
Preference number: 2 (lower is better)
Translates to: AGRFRPWRSRFLRRQSRSRSLAF*WSISSR
Trigger: CCTGGACGAGATGGACCAGCAGAAGGCCAAGCTCCG...ACTCCTGCTCTGCCTCCGAAGAAACCTGCTCCTCCACGGCCTAAACCGCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR GCA 90 bp GCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGACTCAACTTACAGAGGTAAAACTGCCCCTCTCTaGCAGGGAGACGCCTTCGCT +
Preference number: 2 (lower is better)
Translates to: ASGREWGGPEAEDSTYRGKTAPL*QGDAFA
Trigger: AGCGAAGGCGTCTCCCTGGCAGAGAGGGGCAGTTTT...ACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR CCA 90 bp TCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCACCCTGAAGCACTGCCCCCTCTCTaGAACCCGCCCGTGCCCTGT +
Preference number: 2 (lower is better)
Translates to: SPGDVTFPGLAAESAHPEALPPL*NPPVPC
Trigger: ACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGC...TTCAGGGTGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
3UTR-3UTR CCA 90 bp CCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATTCAGCCCCGAGTGGCTaGAATGGATCGGGGGCCTCG +
Preference number: 2 (lower is better)
Translates to: PPSPGPWSTVATVCVCIYSAPSG*NGSGAS
Trigger: CGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGA...ATATATACACACACACACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000602022.5
3UTR-3UTR CCA 90 bp CACCAAGGAAACATCCAGACATGCGCGGCCCGGCCCATCCGCTCCCGGAACAGCGGCCATGAACAGATCTaGCGGGTGGGATGTTCTGCT +
Preference number: 2 (lower is better)
Translates to: HQGNIQTCAARPIRSRNSGHEQI*RVGCSA
Trigger: AGCAGAACATCCCACCCGCCAGATCTGTTCATGGCC...GCTGTTCCGGGAGCGGATGGGCCGGGCCGCGCATGTCTGGATGTTTCCTTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR CCA 90 bp ACACACCCTGCCTCGGTCAGAAGTGGGATCTGCTGCGCCGCCAGGGCACGCACAGCTGTGTTCTGCTTGTaGCTACTGCCTCTTCCCGCA +
Preference number: 2 (lower is better)
Translates to: THPASVRSGICCAARARTAVFCL*LLPLPA
Trigger: TGCGGGAAGAGGCAGTAGCCACAAGCAGAACACAGC...TGTGCGTGCCCTGGCGGCGCAGCAGATCCCACTTCTGACCGAGGCAGGGTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR-3UTR TCA 90 bp TGCCTCTCTCCGAAGGCGGGACCATGTCCGGCGAGAGGACTTGAGGAGGGTCGATTGGCTGTGTTTGCTTaGGGCTGTGCTTGGGGGACA +
Preference number: 2 (lower is better)
Translates to: CLSPKAGPCPARGLEEGRLAVFA*GCAWGT
Trigger: TGTCCCCCAAGCACAGCCTCAAGCAAACACAGCCAA...TCGACCCTCCTCAAGTCCTCTCGCCGGACATGGTCCCGCCTTCGGAGAGAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR TCA 90 bp TTGAGCATCCTGTTTCTGAGCCTCGAGCTCCTGCAAACTGCTTGTTTCCCGGTCGGAGCCGAGAGAGCCTaGACTGTCCGGGCCGGGCGT +
Preference number: 2 (lower is better)
Translates to: LSILFLSLELLQTACFPVGAERA*TVRAGR
Trigger: ACGCCCGGCCCGGACAGTTCAGGCTCTCTCGGCTCC...GACCGGGAAACAAGCAGTTTGCAGGAGCTCGAGGCTCAGAAACAGGATGCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR GCA 90 bp GGGGTGGCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCCCAAATCCCAGGGAAGCTaGAAGCGGAAGGGAGTGGGG +
Preference number: 2 (lower is better)
Translates to: GVARRRRTQLTEVKSAKPKSQGS*KRKGVG
Trigger: CCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTT...GGGCTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
3UTR-3UTR CCA 90 bp CACCAAGGAAACATCCAGACATGCGCGGCCCGGCCCATCCGCTCCCGGAACAGCAGGTCACACCTGTCTTaGTATCAGGGGCTCAAGAGC +
Preference number: 2 (lower is better)
Translates to: HQGNIQTCAARPIRSRNSRSHLS*YQGLKS
Trigger: GCTCTTGAGCCCCTGATACCAAGACAGGTGTGACCT...GCTGTTCCGGGAGCGGATGGGCCGGGCCGCGCATGTCTGGATGTTTCCTTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR CCA 90 bp AGTCCCAAACCGTGTCACAGCGTGGCATATGAGGGATGGAGGCCTTCTCCGTGTCCACCCCTTACCACCTaGGCCATGGGCTCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: SPKPCHSVAYEGWRPSPCPPLTT*AMGSRR
Trigger: CCTCCTGGAGCCCATGGCCCAGGTGGTAAGGGGTGG...ACACGGAGAAGGCCTCCATCCCTCATATGCCACGCTGTGACACGGTTTGGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR-3UTR TCA 90 bp TTTACCGCTGGGCGGTTTAGGCCGTGGAGGAGCAGGTTTCTTCGGAGGCAGAGCCCTTGTCAATGTCACTaGGGTCCCAGACCCTGCCCA +
Preference number: 2 (lower is better)
Translates to: FTAGRFRPWRSRFLRRQSPCQCH*GPRPCP
Trigger: TGGGCAGGGTCTGGGACCTCAGTGACATTGACAAGG...GCTCTGCCTCCGAAGAAACCTGCTCCTCCACGGCCTAAACCGCCCAGCGGTAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR TCA 90 bp GGACGTCGCTCAGCATGTCTCGGAGCTTGGCCTTCTGCTGGTCCATCTCGTCCAGGGCTGCTGGTGTCGTaGAATTTAGGCGGTGGCATG +
Preference number: 2 (lower is better)
Translates to: GRRSACLGAWPSAGPSRPGLLVS*NLGGGM
Trigger: CATGCCACCGCCTAAATTTCACGACACCAGCAGCCC...TGGACGAGATGGACCAGCAGAAGGCCAAGCTCCGAGACATGCTGAGCGACGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR GCA 90 bp GGACGTCGCTCAGCATGTCTCGGAGCTTGGCCTTCTGCTGGTCCATCTCGTCCAAAATCCCAGGGAAGCTaGAAGCGGAAGGGAGTGGGG +
Preference number: 2 (lower is better)
Translates to: GRRSACLGAWPSAGPSRPKSQGS*KRKGVG
Trigger: CCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTT...TGGACGAGATGGACCAGCAGAAGGCCAAGCTCCGAGACATGCTGAGCGACGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR GCA 90 bp GCTGGGCGGTTTAGGCCGTGGAGGAGCAGGTTTCTTCGGAGGCAGAGCAGGAGTTACAGAGGTGAAGTCTaGAAAGCCCGAGGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: AGRFRPWRSRFLRRQSRSYRGEV*KARGRG
Trigger: GCCTCTGCCTCGGGCTTTGCAGACTTCACCTCTGTA...ACTCCTGCTCTGCCTCCGAAGAAACCTGCTCCTCCACGGCCTAAACCGCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR GCA 90 bp GGGGGCCAGACACAAGAGACAGATGAGCTCGCCAGCAGTGCCTTCCCAGCAGCCCCCTGGGGCGCTGCTTaGCATTACTTCCTCATCTTT +
Preference number: 2 (lower is better)
Translates to: GGQTQETDELASSAFPAAPWGAA*HYFLIF
Trigger: AAAGATGAGGAAGTAATGGCAAGCAGCGCCCCAGGG...GGCTGCTGGGAAGGCACTGCTGGCGAGCTCATCTGTCTCTTGTGTCTGGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR GCA 90 bp AAGGAAGAGGAGTCCACTTGCGACAACCAGAAACGACCAGGACGCCTGAGGGACAGAAGTGGGATCTGCTaGGCCGCCAGGGCACGCACA +
Preference number: 2 (lower is better)
Translates to: KEEESTCDNQKRPGRLRDRSGIC*AARART
Trigger: TGTGCGTGCCCTGGCGGCGCAGCAGATCCCACTTCT...GTCCCTCAGGCGTCCTGGTCGTTTCTGGTTGTCGCAAGTGGACTCCTCTTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR-3UTR CCA 90 bp CCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATTGTCTGACTGATGCGTaGGAGGGCGGGTGGGGATGT +
Preference number: 2 (lower is better)
Translates to: PPSPGPWSTVATVCVCIYCLTDA*EGGWGC
Trigger: ACATCCCCACCCGCCCTCCCACGCATCAGTCAGACA...ATATATACACACACACACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
3UTR-3UTR TCA 90 bp CGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCAGGGGCAGACTCTGGTCTGCAAGGCCTGGTGTaGACGCGCAAAGTGGCAGCA +
Preference number: 2 (lower is better)
Translates to: RNGKLHVPRFEAAGADSGLQGLV*TRKVAA
Trigger: TGCTGCCACTTTGCGCGTTCACACCAGGCCTTGCAG...ACCAGAGTCTGCCCCTGCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR GCA 90 bp TTCTGTGATCACAAGTTGCGACCGCTGCCAACCCCAAGATGCTCAGAGACTCATCCCCTGCCTGGGGGCTaGCGAGAAGGGACAGAGTGG +
Preference number: 2 (lower is better)
Translates to: FCDHKLRPLPTPRCSETHPLPGG*REGTEW
Trigger: CCACTCTGTCCCTTCTCGGCAGCCCCCAGGCAGGGG...ATGAGTCTCTGAGCATCTTGGGGTTGGCAGCGGTCGCAACTTGTGATCACAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR-3UTR GCA 90 bp CCTCTGCCCAGGCTCATCTGTGTAAACACACACCCTGCCTCGGTCAGAAGTGGGTCTGCTTGTGGCTACTaGCTCTTCCCGCAGCGTGGA +
Preference number: 2 (lower is better)
Translates to: PLPRLICVNTHPASVRSGSACGY*LFPQRG
Trigger: TCCACGCTGCGGGAAGAGGCAGTAGCCACAAGCAGA...CCCACTTCTGACCGAGGCAGGGTGTGTGTTTACACAGATGAGCCTGGGCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR-3UTR CCA 90 bp AGGTCCCAGACCCTGCCCAGGACATCAAGAGGCAGCTTTGAGTTCATGAGGACTCCCGAGTGGCTGGAATaGATCGGGGGCCTCGGGAAA +
Preference number: 2 (lower is better)
Translates to: RSQTLPRTSRGSFEFMRTPEWLE*IGGLGK
Trigger: TTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG...AGTCCTCATGAACTCAAAGCTGCCTCTTGATGTCCTGGGCAGGGTCTGGGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR CCA 90 bp TCATCTCGATCCAAGTGCCCATCCTTGTCAATGTCACTGAGGTCCCAGACCCTGTCAGCCCCGAGTGGCTaGAATGGATCGGGGGCCTCG +
Preference number: 2 (lower is better)
Translates to: SSRSKCPSLSMSLRSQTLSAPSG*NGSGAS
Trigger: CGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGA...CAGGGTCTGGGACCTCAGTGACATTGACAAGGATGGGCACTTGGATCGAGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR CAA 90 bp GGGCGTGCCTCTCTCCGAAGGCGGGACCATGTCCGGCGAGAGGACTaGAGGAGGGTCGATGCCTTTACTGACCTTCTGCTGAATGAAATA +
Preference number: 2 (lower is better)
Translates to: GRASLRRRDHVRRED*RRVDAFTDLLLNEI
Trigger: TATTTCATTCAGCAGAAGGTCAGTAAAGGCATCGACCCTCCTCAAGTCCTCTCGCCGGACATGGTCCCGCCTTCGGAGAGAGGCACGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR CAA 90 bp GTCTCGGAGCTTGGCCTTCTGCTGGTCCATCTCGTCCAGGCGGTCTaGAGCATCCTGTTTCTGAGCCTCGAGCTCCTGCAAACTGCTTGT +
Preference number: 2 (lower is better)
Translates to: VSELGLLLVHLVQAV*SILFLSLELLQTAC
Trigger: ACAAGCAGTTTGCAGGAGCTCGAGGCTCAGAAACAGGATGCTCAAGACCGCCTGGACGAGATGGACCAGCAGAAGGCCAAGCTCCGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR GCA 90 bp AAGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCAGACCTTTCCAGGTCTTaGAGCCGAGTCTGCTCACCC +
Preference number: 2 (lower is better)
Translates to: KGFPRRCDLSRSCSRVCSDLSRS*SRVCSP
Trigger: GGGTGAGCAGACTCGGCTGCAAGACCTGGAAAGGTC...TGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
3UTR-3UTR GCA 90 bp TTCTCGGAATCTGTGTTCTGTGATCACAAGTTGCGACCGCTGCCAACCCCAAGAAAGACAGAGCCCATCTaGCCCTGCCTGGGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: FSESVFCDHKLRPLPTPRKTEPI*PCLGAA
Trigger: GGCAGCCCCCAGGCAGGGGCAGATGGGCTCTGTCTT...TCTTGGGGTTGGCAGCGGTCGCAACTTGTGATCACAGAACACAGATTCCGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR-3UTR CCA 90 bp CATACACCACTGGGGGAGTGTCTGACTGATGCGTGGGAGGGCGGGTGGGGATGTAACCCCTTTTTACTTTaGAACGGGTCGCCGCTGTCA +
Preference number: 2 (lower is better)
Translates to: HTPLGECLTDAWEGGWGCNPFLL*NGSPLS
Trigger: TGACAGCGGCGACCCGTTCCAAAGTAAAAAGGGGTT...ACATCCCCACCCGCCCTCCCACGCATCAGTCAGACACTCCCCCAGTGGTGTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000602022.5
3UTR-3UTR CCA 90 bp CGGAACAGCACCAAGACGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCCCAGGCTGCAAGGCCTaGTGTGAACGCGCAAAGTGG +
Preference number: 2 (lower is better)
Translates to: RNSTKTKWETTCPQVRGCPGCKA*CERAKW
Trigger: CCACTTTGCGCGTTCACACCAGGCCTTGCAGCCTGG...GCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCGTCTTGGTGCTGTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR CCA 90 bp TTCTGTGATCACAAGTTGCGACCGCTGCCAACCCCAAGATGCTCAGAGACTCATACTGCCCAGTCACACTaGCACCTGGGGCACCTGGGC +
Preference number: 2 (lower is better)
Translates to: FCDHKLRPLPTPRCSETHTAQSH*HLGHLG
Trigger: GCCCAGGTGCCCCAGGTGCCAGTGTGACTGGGCAGT...ATGAGTCTCTGAGCATCTTGGGGTTGGCAGCGGTCGCAACTTGTGATCACAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR-3UTR TCA 90 bp CGGAACAGCACCAAGACGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCAACCAACGTTGGCCATaGACAGATCTGGCGGGTGGG +
Preference number: 2 (lower is better)
Translates to: RNSTKTKWETTCPQVRGCNQRWP*TDLAGG
Trigger: CCCACCCGCCAGATCTGTTCATGGCCAACGTTGGTT...GCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCGTCTTGGTGCTGTTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR TCA 90 bp GGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGGAGCCCCTGCCCCAGGCCTaGTCACAACTCCAGGGTCAT +
Preference number: 2 (lower is better)
Translates to: GGYGNHLITSPREKRVWEPLPQA*SQLQGH
Trigger: ATGACCCTGGAGTTGTGATCAGGCCTGGGGCAGGGG...CTCCCATACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR TCA 90 bp CTGTCTTTGGAGTTGGGGGAATCACTGGCCACTTGCAAACTGCCACTTCACTGCGTAGGAGCCGGGTTGTaGGACGGAAACACACACGCC +
Preference number: 2 (lower is better)
Translates to: LSLELGESLATCKLPLHCVGAGL*DGNTHA
Trigger: GGCGTGTGTGTTTCCGTCTCACAACCCGGCTCCTAC...GCAGTGAAGTGGCAGTTTGCAAGTGGCCAGTGATTCCCCCAACTCCAAAGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR GCA 90 bp GGGGAAGCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGTATATATAGACATCTaGACTGCCCCCTCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: GEALGASSPRLTAVCSSPVYIDI*TAPSLE
Trigger: TTCCAGAGAGGGGGCAGTGCAGATGTCTATATATAC...TGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGCTTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
3UTR-3UTR GCA 90 bp TTTATACAACGAGTGCATACACCACTGGGGGAGTGTCTGACTGATGCGTGGGAGCGGGGAAGCCCTGGGTaGTTCCTCTCCTCGACTGAC +
Preference number: 2 (lower is better)
Translates to: FIQRVHTPLGECLTDAWERGSPG*FLSSTD
Trigger: GTCAGTCGAGGAGAGGAAGCACCCAGGGCTTCCCCG...CTCCCACGCATCAGTCAGACACTCCCCCAGTGGTGTATGCACTCGTTGTATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
3UTR-3UTR GCA 90 bp CACAGCGAACTCATCTCGATCCAAGTGCCCATCCTTGTCAATGTCACTGAGGTCAGCCCAGTGGGCCTCTaGAGAGGGCGGTGTGACCAT +
Preference number: 2 (lower is better)
Translates to: HSELISIQVPILVNVTEVSPVGL*RGRCDH
Trigger: ATGGTCACACCGCCCTCTGCAGAGGCCCACTGGGCT...GACCTCAGTGACATTGACAAGGATGGGCACTTGGATCGAGATGAGTTCGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000596037.5
3UTR-3UTR GCA 90 bp AAACAGAGCTGCAAGGTCAGGGTTGAGCTCAGAATGCGGCTGTACAAGTGTCATGGACGCCTGAGGGACTaGTGCCACCGTGTGGCCAAC +
Preference number: 2 (lower is better)
Translates to: KQSCKVRVELRMRLYKCHGRLRD*CHRVAN
Trigger: GTTGGCCACACGGTGGCAGCAGTCCCTCAGGCGTCC...ATGACACTTGTACAGCCGCATTCTGAGCTCAACCCTGACCTTGCAGCTCTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR-3UTR CCA 90 bp TCAACTTACAGAGGTGAAGTCTGCAAAGCCCGAGGCAGAGGCCTTAGAAGGTTTTCAGCCCCGAGTGGCTaGAATGGATCGGGGGCCTCG +
Preference number: 2 (lower is better)
Translates to: STYRGEVCKARGRGLRRFSAPSG*NGSGAS
Trigger: CGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGA...AAACCTTCTAAGGCCTCTGCCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
3UTR-3UTR CCA 90 bp GGTTTCCAGCTGGACTCGCCCAGCCTGAATGCTCTGCTCCAGCTGGGTTTCCTCCACCCAGTTCACTGTTaGCTGTGTTTGCTTGAGGCT +
Preference number: 2 (lower is better)
Translates to: GFQLDSPSLNALLQLGFLHPVHC*LCLLEA
Trigger: AGCCTCAAGCAAACACAGCCAACAGTGAACTGGGTG...GAGGAAACCCAGCTGGAGCAGAGCATTCAGGCTGGGCGAGTCCAGCTGGAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR CCA 90 bp GGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCTGGGGCGCTGCTTGCCATTACAGCCGCCTGCACTTaGCTGGAACCAACGTTGGCC +
Preference number: 2 (lower is better)
Translates to: GEANSYLKEQHPGALLAITAACT*LEPTLA
Trigger: GGCCAACGTTGGTTCCAGCCAAGTGCAGGCGGCTGT...AATGGCAAGCAGCGCCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR CCA 90 bp AAGGAAGAGGAGTCCACTTGCGACAACCAGAAACGACCAGGACGCCTGAGGGACAACCGTGTCACAGCGTaGCATATGAGGGATGGAGGC +
Preference number: 2 (lower is better)
Translates to: KEEESTCDNQKRPGRLRDNRVTA*HMRDGG
Trigger: GCCTCCATCCCTCATATGCCACGCTGTGACACGGTT...GTCCCTCAGGCGTCCTGGTCGTTTCTGGTTGTCGCAAGTGGACTCCTCTTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR-3UTR CCA 90 bp TGTCCTGGCCCGGCACCGCCAATAGGAAGTGAGACCGGCTCTGAAATCACAGCTACTGCTGCCACCGTGTaGCCAACGTTTTCTGCTTTC +
Preference number: 2 (lower is better)
Translates to: CPGPAPPIGSETGSEITATAATV*PTFSAF
Trigger: GAAAGCAGAAAACGTTGGCCACACGGTGGCAGCAGT...AGCTGTGATTTCAGAGCCGGTCTCACTTCCTATTGGCGGTGCCGGGCCAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR CAA 90 bp CAGCAAAAACAACAGACAGCCGCCTGCACTTGGCTGGAACCAACGTaGGCCATGAACAGATCTGGCGGGTGGGATGTTCTGCTGTCACAC +
Preference number: 2 (lower is better)
Translates to: QQKQQTAACTWLEPT*AMNRSGGWDVLLSH
Trigger: GTGTGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCCAACGTTGGTTCCAGCCAAGTGCAGGCGGCTGTCTGTTGTTTTTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR TCA 90 bp GGATCATCCATGGCTCCAAAACTGCCCCTCTCTGCCAGGGAGACGCCTTCGCTCAGTGATGAGATCATCTaGGTCTCATCCTGGCACTTC +
Preference number: 2 (lower is better)
Translates to: GSSMAPKLPLSARETPSLSDEII*VSSWHF
Trigger: GAAGTGCCAGGATGAGACTCAGATGATCTCATCACT...GAGCGAAGGCGTCTCCCTGGCAGAGAGGGGCAGTTTTGGAGCCATGGATGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR GCA 90 bp CATACACCACTGGGGGAGTGTCTGACTGATGCGTGGGAGGGCGGGTGGGGATGTGTATATATAGACATCTaGACTGCCCCCTCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: HTPLGECLTDAWEGGWGCVYIDI*TAPSLE
Trigger: TTCCAGAGAGGGGGCAGTGCAGATGTCTATATATAC...ACATCCCCACCCGCCCTCCCACGCATCAGTCAGACACTCCCCCAGTGGTGTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
3UTR-3UTR GCA 90 bp GCCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTCCCTCAGATGTCCCCTaGCCCCTGATTAGTAGAATG +
Preference number: 2 (lower is better)
Translates to: ARGRLWKPPHYESTRKESPSDVP*PLISRM
Trigger: CATTCTACTAATCAGGGGGCAGGGGACATCTGAGGG...ACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR GCA 90 bp GTAAAAATCTGTCTTTGGAGTTGGGGGAATCACTGGCCACTTGCAAACTGCCACGGAAACATCCAGACATaGGCGGCCCGGCCCATCCGC +
Preference number: 2 (lower is better)
Translates to: VKICLWSWGNHWPLANCHGNIQT*AARPIR
Trigger: GCGGATGGGCCGGGCCGCGCATGTCTGGATGTTTCC...GTGGCAGTTTGCAAGTGGCCAGTGATTCCCCCAACTCCAAAGACAGATTTTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR GCA 90 bp GGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGCCCAGGGGACGCGTGTaGTTCCCCATAAATCCTTGG +
Preference number: 2 (lower is better)
Translates to: GGGYGNHLITSPREKRVWPRGRV*FPINPW
Trigger: CCAAGGATTTATGGGGAAGCACACGCGTCCCCTGGG...CCATACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR CCA 90 bp GCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGATCCGAGGTAAATaGGTCATTCTTTGTCTGTTT +
Preference number: 2 (lower is better)
Translates to: APSGWNGSGASGKSAEPSWIRGK*VILCLF
Trigger: AAACAGACAAAGAATGACCCATTTACCTCGGATCCA...GCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR CCA 90 bp CGGAACAGCACCAAGACGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCGGCCATGAACAGATCTaGCGGGTGGGATGTTCTGCT +
Preference number: 2 (lower is better)
Translates to: RNSTKTKWETTCPQVRGCGHEQI*RVGCSA
Trigger: AGCAGAACATCCCACCCGCCAGATCTGTTCATGGCC...GCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCGTCTTGGTGCTGTTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR CCA 90 bp CCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTAGAAAGAGCAACACCCTaGGGCGCTGCTTGCCATTAC +
Preference number: 2 (lower is better)
Translates to: PGGGYGNHLITSPREKRVERATP*GAACHY
Trigger: GTAATGGCAAGCAGCGCCCCAGGGTGTTGCTCTTTC...TACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR CAA 90 bp TGCTCCAGCTGGGTTTCCTCCTGCTGCAATCGGTTCAGCTCCGACTaGGCTCGGTTCAGATCGTCTTCCTGGGACTTTAAGTCAGATTCC +
Preference number: 2 (lower is better)
Translates to: CSSWVSSCCNRFSSD*ARFRSSSWDFKSDS
Trigger: GGAATCTGACTTAAAGTCCCAGGAAGACGATCTGAACCGAGCCAAGTCGGAGCTGAACCGATTGCAGCAGGAGGAAACCCAGCTGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR TCA 90 bp GCCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTAGGCCAATTCTTACTTaGAAGAGCAACACCCTGGGG +
Preference number: 2 (lower is better)
Translates to: ARGRLWKPPHYESTRKESRPILT*KSNTLG
Trigger: CCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCT...ACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR TCA 90 bp GGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGGACACAAGAGACAGATaGGCTCGCCAGCAGTGCCTT +
Preference number: 2 (lower is better)
Translates to: GGGYGNHLITSPREKRVWDTRDR*ARQQCL
Trigger: AAGGCACTGCTGGCGAGCTCATCTGTCTCTTGTGTC...CCATACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR TCA 90 bp CCGGCACCGCCAATAGGAAGTGAGACCGGCTCTGAAATCACAGCTGCATGTGTGGGAATCTGTGTTCTGTaGTCACAAGTTGCGACCGCT +
Preference number: 2 (lower is better)
Translates to: PAPPIGSETGSEITAACVGICVL*SQVATA
Trigger: AGCGGTCGCAACTTGTGATCACAGAACACAGATTCC...CACACATGCAGCTGTGATTTCAGAGCCGGTCTCACTTCCTATTGGCGGTGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR-3UTR GCA 90 bp AGGTCACACCTGTCTTGGTATCAGGGGCTCAAGAGCTCTCAAAAATGTAAGGGGGCGGGTGGGATGTTCTaGTGTCACACCAGGGGACCA +
Preference number: 2 (lower is better)
Translates to: RSHLSWYQGLKSSQKCKGAGGMF*CHTRGP
Trigger: TGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGC...CCCCTTACATTTTTGAGAGCTCTTGAGCCCCTGATACCAAGACAGGTGTGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR GCA 90 bp AAGGAAGAGGAGTCCACTTGCGACAACCAGAAACGACCAGGACGCCTGAGGGACTGTAAACACACACCCTaGCTCGGTCAGAAGTGGGAT +
Preference number: 2 (lower is better)
Translates to: KEEESTCDNQKRPGRLRDCKHTP*LGQKWD
Trigger: ATCCCACTTCTGACCGAGGCAGGGTGTGTGTTTACA...GTCCCTCAGGCGTCCTGGTCGTTTCTGGTTGTCGCAAGTGGACTCCTCTTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR-3UTR GCA 90 bp AGCCTCCCAAAGGAAGAGGAGTCCACTTGCGACAACCAGAAACGACCAGGACGCGTGGCCAACGTTTTCTaGTTTCGGGAGATGGTTTCC +
Preference number: 2 (lower is better)
Translates to: SLPKEEESTCDNQKRPGRVANVF*FREMVS
Trigger: GGAAACCATCTCCCGAAAGCAGAAAACGTTGGCCAC...GCGTCCTGGTCGTTTCTGGTTGTCGCAAGTGGACTCCTCTTCCTTTGGGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR-3UTR CCA 90 bp ATGAAATACATAGCTAACGCGAATTGGTCTTTGCTTAACTTCCCCGTTTGCCTCCGGAAGGGAGTGGGGTaGCCCGGAGGCGGAGGACTC +
Preference number: 2 (lower is better)
Translates to: MKYIANANWSLLNFPVCLRKGVG*PGGGGL
Trigger: GAGTCCTCCGCCTCCGGGCCACCCCACTCCCTTCCG...GAGGCAAACGGGGAAGTTAAGCAAAGACCAATTCGCGTTAGCTATGTATTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR CCA 90 bp GAACAGAATCTCAAGTGCTTCTCGGAATCTGTGTTCTGTGATCACAAGTTGCGACCATCTGCCCCTGCCTaGGGGCTGCCGAGAAGGGAC +
Preference number: 2 (lower is better)
Translates to: EQNLKCFSESVFCDHKLRPSAPA*GLPRRD
Trigger: GTCCCTTCTCGGCAGCCCCCAGGCAGGGGCAGATGG...TCGCAACTTGTGATCACAGAACACAGATTCCGAGAAGCACTTGAGATTCTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR-3UTR CCA 90 bp AAACAGAGCTGCAAGGTCAGGGTTGAGCTCAGAATGCGGCTGTACAAGTGTCATCCTCTTCCCGCAGCGTaGATAATGCCTGGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: KQSCKVRVELRMRLYKCHPLPAA*IMPGPL
Trigger: CAGAGGCCCAGGCATTATCCACGCTGCGGGAAGAGG...ATGACACTTGTACAGCCGCATTCTGAGCTCAACCCTGACCTTGCAGCTCTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR CAA 90 bp TCCAGGTCCAGGTCGGTCTTCAGGAATATCTCATCAAATCGCATCTaGTCTGCCACGGGCACCACCCAGTTCACTGTTGGCTGTGTTTGC +
Preference number: 2 (lower is better)
Translates to: SRSRSVFRNISSNRI*SATGTTQFTVGCVC
Trigger: GCAAACACAGCCAACAGTGAACTGGGTGGTGCCCGTGGCAGACAAGATGCGATTTGATGAGATATTCCTGAAGACCGACCTGGACCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR CAA 90 bp GGGGGCTTGGACATCTGGCTGAAGTCGGCAAAGCCTTCAGCACTATaGAAGGACCCACTTCCGAAGGGATCTAAGGTTCCAAAGGGATCT +
Preference number: 2 (lower is better)
Translates to: GGLDIWLKSAKPSAL*KDPLPKGSKVPKGS
Trigger: AGATCCCTTTGGAACCTTAGATCCCTTCGGAAGTGGGTCCTTCAATAGTGCTGAAGGCTTTGCCGACTTCAGCCAGATGTCCAAGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR TCA 90 bp TCCTGCTGCAATCGGTTCAGCTCCGACTTGGCTCGGTTCAGATCGTCTTCCTGGATCAAGAGGCAGCTTTaGGTTCATGAGGACTGGCTT +
Preference number: 2 (lower is better)
Translates to: SCCNRFSSDLARFRSSSWIKRQL*VHEDWL
Trigger: AAGCCAGTCCTCATGAACTCAAAGCTGCCTCTTGAT...CCAGGAAGACGATCTGAACCGAGCCAAGTCGGAGCTGAACCGATTGCAGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR GCA 90 bp GCCTCTGTAAGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGGTATATATAGACATCTaGACTGCCCCCTCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: ASVRASPGDVTFPGLAAEVYIDI*TAPSLE
Trigger: TTCCAGAGAGGGGGCAGTGCAGATGTCTATATATAC...CTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCTTACAGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
3UTR-3UTR GCA 90 bp TTCCGCAGAGATGGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCCAACAGACAGCCGCCTaGACTTGGCTGGAACCAACG +
Preference number: 2 (lower is better)
Translates to: FRRDGGHSKQVLKGSRPIQQTAA*TWLEPT
Trigger: CGTTGGTTCCAGCCAAGTGCAGGCGGCTGTCTGTTG...GATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCCATCTCTGCGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR GCA 90 bp AACAGCACCAAGACGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCAGGAACACCCTGGGGCGCTaGTTGCCATTACTTCCTCAT +
Preference number: 2 (lower is better)
Translates to: NSTKTKWETTCPQVRGCRNTLGR*LPLLPH
Trigger: ATGAGGAAGTAATGGCAAGCAGCGCCCCAGGGTGTT...CCTGCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCGTCTTGGTGCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR CCA 90 bp TTTATACAACGAGTGCATACACCACTGGGGGAGTGTCTGACTGATGCGTGGGAGGTCCTTGGAGTACGGTaGCGACGGTGTGTGTGTGTA +
Preference number: 2 (lower is better)
Translates to: FIQRVHTPLGECLTDAWEVLGVR*RRCVCV
Trigger: TACACACACACACCGTCGCCACCGTACTCCAAGGAC...CTCCCACGCATCAGTCAGACACTCCCCCAGTGGTGTATGCACTCGTTGTATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
3UTR-3UTR CCA 90 bp CGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCCCGAGGCAGAGGCCTTAAACCCCTTTTTACTTTaGAACGGGTCGCCGCTGTCA +
Preference number: 2 (lower is better)
Translates to: RRTQLTEVKSAKPEAEALNPFLL*NGSPLS
Trigger: TGACAGCGGCGACCCGTTCCAAAGTAAAAAGGGGTT...TAAGGCCTCTGCCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
3UTR-3UTR CCA 90 bp GAACTCATCTCGATCCAAGTGCCCATCCTTGTCAATGTCACTGAGGTCCCAGACCCATCAGAGGGCTGCTaGTGTCGTGCTGAGAAGAGA +
Preference number: 2 (lower is better)
Translates to: ELISIQVPILVNVTEVPDPSEGC*CRAEKR
Trigger: TCTCTTCTCAGCACGACACCAGCAGCCCTCTGATGG...GTCTGGGACCTCAGTGACATTGACAAGGATGGGCACTTGGATCGAGATGAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596037.5
3UTR-3UTR CCA 90 bp GTAAAAATCTGTCTTTGGAGTTGGGGGAATCACTGGCCACTTGCAAACTGCCACACAGCCGCCTGCACTTaGCTGGAACCAACGTTGGCC +
Preference number: 2 (lower is better)
Translates to: VKICLWSWGNHWPLANCHTAACT*LEPTLA
Trigger: GGCCAACGTTGGTTCCAGCCAAGTGCAGGCGGCTGT...GTGGCAGTTTGCAAGTGGCCAGTGATTCCCCCAACTCCAAAGACAGATTTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR CCA 90 bp CGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCAGGGGCAGACTCTGGTCCCTCTGAACTTGGGTaGTTGGCCCAATGTAAATAC +
Preference number: 2 (lower is better)
Translates to: RNGKLHVPRFEAAGADSGPSELG*LAQCKY
Trigger: GTATTTACATTGGGCCAACCACCCAAGTTCAGAGGG...ACCAGAGTCTGCCCCTGCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR CAA 90 bp GGTCTTGAGCATCCTGTTTCTGAGCCTCGAGCTCCTGCAAACTGCTaGTTTCCCGGTCTAGGTCATTTTGTAATTCCTGCACCTCGCTGG +
Preference number: 2 (lower is better)
Translates to: GLEHPVSEPRAPANC*FPGLGHFVIPAPRW
Trigger: CCAGCGAGGTGCAGGAATTACAAAATGACCTAGACCGGGAAACAAGCAGTTTGCAGGAGCTCGAGGCTCAGAAACAGGATGCTCAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR GCA 90 bp GTTAAGTTTGAGAAGCCCTCTGAACTTGGGTGGTTGGCCCAATGTAAATACTTCCAGCATGGCCACCTGTaGCAGGCTGCAAGGCCTGGT +
Preference number: 2 (lower is better)
Translates to: VKFEKPSELGWLAQCKYFQHGHL*QAARPG
Trigger: ACCAGGCCTTGCAGCCTGGCACAGGTGGCCATGCTG...GAAGTATTTACATTGGGCCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR GCA 90 bp GGAGCCTGTGCACTGGGCCCTAAATCTTCTGCCAGTCCCAAACCGTGTCACAGCGAACAGAATCTCAAGTaGTTCTCGGAATCTGTGTTC +
Preference number: 2 (lower is better)
Translates to: GACALGPKSSASPKPCHSEQNLK*FSESVF
Trigger: GAACACAGATTCCGAGAAGCACTTGAGATTCTGTTC...GCTGTGACACGGTTTGGGACTGGCAGAAGATTTAGGGCCCAGTGCACAGGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR-3UTR CCA 90 bp GTGTGGTGTTTAGAGAGCACGAGCGCTCACTCTTATTCCAGGGAGGAAGAGGAAAACAGATCTGGCGGGTaGGATGTTCTGCTGTCACAC +
Preference number: 2 (lower is better)
Translates to: VWCLESTSAHSYSREEEENRSGG*DVLLSH
Trigger: GTGTGACAGCAGAACATCCCACCCGCCAGATCTGTT...TTCCTCTTCCTCCCTGGAATAAGAGTGAGCGCTCGTGCTCTCTAAACACCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR CCA 90 bp GGGGGCCAGACACAAGAGACAGATGAGCTCGCCAGCAGTGCCTTCCCAGCAGCCAAACTGATCCAATTTTaGTTAAGTTTGAGAAGCCCT +
Preference number: 2 (lower is better)
Translates to: GGQTQETDELASSAFPAAKLIQF*LSLRSP
Trigger: AGGGCTTCTCAAACTTAACCAAAATTGGATCAGTTT...GGCTGCTGGGAAGGCACTGCTGGCGAGCTCATCTGTCTCTTGTGTCTGGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR CCA 90 bp GTGTGGTGTTTAGAGAGCACGAGCGCTCACTCTTATTCCAGGGAGGAAGAGGAAAGGTCACACCTGTCTTaGTATCAGGGGCTCAAGAGC +
Preference number: 2 (lower is better)
Translates to: VWCLESTSAHSYSREEEERSHLS*YQGLKS
Trigger: GCTCTTGAGCCCCTGATACCAAGACAGGTGTGACCT...TTCCTCTTCCTCCCTGGAATAAGAGTGAGCGCTCGTGCTCTCTAAACACCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR CCA 90 bp CCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTAAGCACCAAGACGAAATaGGAAACTACATGTCCCCAG +
Preference number: 2 (lower is better)
Translates to: PGGGYGNHLITSPREKRVSTKTK*ETTCPQ
Trigger: CTGGGGACATGTAGTTTCCCATTTCGTCTTGGTGCT...TACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR CAA 90 bp CTGCCCAGGACATCAAGAGGCAGCTTTGAGTTCATGAGGACTGGCTaGACTTTGTCTCCAGAGAGCAAACCATTGATGGGCAAGAGGCTT +
Preference number: 2 (lower is better)
Translates to: LPRTSRGSFEFMRTG*TLSPESKPLMGKRL
Trigger: AAGCCTCTTGCCCATCAATGGTTTGCTCTCTGGAGACAAAGTCAAGCCAGTCCTCATGAACTCAAAGCTGCCTCTTGATGTCCTGGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000596037.5
3UTR CAA 90 bp AACGGGTCGCCTTTGAAGGGGTCAGCTCCTTTAAATGGGTCAGATTaGAAGGGGTCTTCTGTCTGGAAAGGATCCGGATGCAACTCTTGC +
Preference number: 2 (lower is better)
Translates to: NGSPLKGSAPLNGSD*KGSSVWKGSGCNSC
Trigger: GCAAGAGTTGCATCCGGATCCTTTCCAGACAGAAGACCCCTTCAAATCTGACCCATTTAAAGGAGCTGACCCCTTCAAAGGCGACCCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR CAA 90 bp GATGGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCTaGGACTTTGTTCTGGAAGCCAGGATTCAGCATGGCCACCTGTGC +
Preference number: 2 (lower is better)
Translates to: DGGHSKQVLKGSRPI*DFVLEARIQHGHLC
Trigger: GCACAGGTGGCCATGCTGAATCCTGGCTTCCAGAACAAAGTCCAAGATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR CAA 90 bp CAGAATCTCAAGTGCTTCTCGGAATCTGTGTTCTGTGATCACAAGTaGCGACCGCTGCCAACCCCAAGATGCTCAGAGACTCATCTGCTC +
Preference number: 2 (lower is better)
Translates to: QNLKCFSESVFCDHK*RPLPTPRCSETHLL
Trigger: GAGCAGATGAGTCTCTGAGCATCTTGGGGTTGGCAGCGGTCGCAACTTGTGATCACAGAACACAGATTCCGAGAAGCACTTGAGATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR-3UTR TCA 90 bp TCATCTCGATCCAAGTGCCCATCCTTGTCAATGTCACTGAGGTCCCAGACCCTGCAGAGAGCAAACCATTaGTGGGCAAGAGGCTTTCAA +
Preference number: 2 (lower is better)
Translates to: SSRSKCPSLSMSLRSQTLQRANH*WARGFQ
Trigger: TTGAAAGCCTCTTGCCCATCAATGGTTTGCTCTCTG...CAGGGTCTGGGACCTCAGTGACATTGACAAGGATGGGCACTTGGATCGAGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000596037.5
3UTR-3UTR TCA 90 bp GTAAAAATCTGTCTTTGGAGTTGGGGGAATCACTGGCCACTTGCAAACTGCCACAGGAAGAGGAATCCATaGCGTACAGAGGCCCAGGAG +
Preference number: 2 (lower is better)
Translates to: VKICLWSWGNHWPLANCHRKRNP*RTEAQE
Trigger: CTCCTGGGCCTCTGTACGTCATGGATTCCTCTTCCT...GTGGCAGTTTGCAAGTGGCCAGTGATTCCCCCAACTCCAAAGACAGATTTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR GCA 90 bp TTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATGGGTCTTTTCCACTAAACGGGTACAGAGGTGAAGTCTaGAAAGCCCGAGGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: LEGLAAEEGTNGSFPLNGYRGEV*KARGRG
Trigger: GCCTCTGCCTCGGGCTTTGCAGACTTCACCTCTGTA...CCCGTTTAGTGGAAAAGACCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
3UTR-3UTR GCA 90 bp GTCTGCTGTTCTGCAAAGGGGTCATTCTGGAACGGGTCGCCTTTGAAGGGGTCAGGAAAGTTTGCTCCTTaGCTGGTTGATTTCGTCTTG +
Preference number: 2 (lower is better)
Translates to: VCCSAKGSFWNGSPLKGSGKFAP*LVDFVL
Trigger: CAAGACGAAATCAACCAGGCAAGGAGCAAACTTTCC...TGACCCCTTCAAAGGCGACCCGTTCCAGAATGACCCCTTTGCAGAACAGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR GCA 90 bp GGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCTTGGACTTTGTTCAACAGACAGCCGCCTaGACTTGGCTGGAACCAACG +
Preference number: 2 (lower is better)
Translates to: GGHSKQVLKGSRPILDFVQQTAA*TWLEPT
Trigger: CGTTGGTTCCAGCCAAGTGCAGGCGGCTGTCTGTTG...AACAAAGTCCAAGATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR GCA 90 bp AAACAGAGCTGCAAGGTCAGGGTTGAGCTCAGAATGCGGCTGTACAAGTGTCATCTGCCAACCCCAAGATaGTCAGAGACTCATCTGCTC +
Preference number: 2 (lower is better)
Translates to: KQSCKVRVELRMRLYKCHLPTPR*SETHLL
Trigger: GAGCAGATGAGTCTCTGAGCATCTTGGGGTTGGCAG...ATGACACTTGTACAGCCGCATTCTGAGCTCAACCCTGACCTTGCAGCTCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR-3UTR GCA 90 bp AAACAGAGCTGCAAGGTCAGGGTTGAGCTCAGAATGCGGCTGTACAAGTGTCATTCTGTGATCACAAGTTaGGACCGCTGCCAACCCCAA +
Preference number: 2 (lower is better)
Translates to: KQSCKVRVELRMRLYKCHSVITS*DRCQPQ
Trigger: TTGGGGTTGGCAGCGGTCGCAACTTGTGATCACAGA...ATGACACTTGTACAGCCGCATTCTGAGCTCAACCCTGACCTTGCAGCTCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR-3UTR TCA 90 bp GAACTCATCTCGATCCAAGTGCCCATCCTTGTCAATGTCACTGAGGTCCCAGACATCAAGAGGCAGCTTTaGGTTCATGAGGACTGGCTT +
Preference number: 2 (lower is better)
Translates to: ELISIQVPILVNVTEVPDIKRQL*VHEDWL
Trigger: AAGCCAGTCCTCATGAACTCAAAGCTGCCTCTTGAT...GTCTGGGACCTCAGTGACATTGACAAGGATGGGCACTTGGATCGAGATGAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000596037.5
3UTR-3UTR TCA 90 bp CGGAACAGCACCAAGACGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCATTCAAAACAGGTTCTaGAAGGATCCAGGCCTATCT +
Preference number: 2 (lower is better)
Translates to: RNSTKTKWETTCPQVRGCIQNRF*KDPGLS
Trigger: AGATAGGCCTGGATCCTTTCAGAACCTGTTTTGAAT...GCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCGTCTTGGTGCTGTTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR TCA 90 bp GAACGCTGGAATCAAAACAAGATAGTATTGGAGACCCATTTTCCACAGCTCTGTATCTGCTCCACCAGCTaGGTGAACACGGGGCAGCCA +
Preference number: 2 (lower is better)
Translates to: ERWNQNKIVLETHFPQLCICSTS*VNTGQP
Trigger: TGGCTGCCCCGTGTTCACTCAGCTGGTGGAGCAGAT...ACAGAGCTGTGGAAAATGGGTCTCCAATACTATCTTGTTTTGATTCCAGCGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR-3UTR GCA 90 bp TTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTATCATCCTGGCACTTCTaGCGGACGTCGCTCAGCATG +
Preference number: 2 (lower is better)
Translates to: LQKWQCRINNARDRECEVSSWHF*RTSLSM
Trigger: CATGCTGAGCGACGTCCGGCAGAAGTGCCAGGATGA...TACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR GCA 90 bp GTAAAAATCTGTCTTTGGAGTTGGGGGAATCACTGGCCACTTGCAAACTGCCACACAAGCCAAAAGCGGTaGCAGGGGACAATGCCAGAT +
Preference number: 2 (lower is better)
Translates to: VKICLWSWGNHWPLANCHTSQKR*QGTMPD
Trigger: ATCTGGCATTGTCCCCTGGCACCGCTTTTGGCTTGT...GTGGCAGTTTGCAAGTGGCCAGTGATTCCCCCAACTCCAAAGACAGATTTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR CCA 90 bp GAGAAACTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACCCCGAGTGGCTGGAATaGATCGGGGGCCTCGGGAAA +
Preference number: 2 (lower is better)
Translates to: EKLFFLQKWQCRINNARDPEWLE*IGGLGK
Trigger: TTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG...GTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAGTTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
3UTR-3UTR CCA 90 bp ATGAAATACATAGCTAACGCGAATTGGTCTTTGCTTAACTTCCCCGTTTGCCTCCTTTCTCTTGGAGGGTaGGATGAGGGACGGGGGCAG +
Preference number: 2 (lower is better)
Translates to: MKYIANANWSLLNFPVCLLSLGG*DEGRGQ
Trigger: CTGCCCCCGTCCCTCATCCCACCCTCCAAGAGAAAG...GAGGCAAACGGGGAAGTTAAGCAAAGACCAATTCGCGTTAGCTATGTATTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR CCA 90 bp AACAGCACCAAGACGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCAGGTGTGAACGCGCAAAGTaGCAGCAAAAACAACAGACA +
Preference number: 2 (lower is better)
Translates to: NSTKTKWETTCPQVRGCRCERAK*QQKQQT
Trigger: TGTCTGTTGTTTTTGCTGCCACTTTGCGCGTTCACA...CCTGCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCGTCTTGGTGCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR CCA 90 bp CTGTCTTTGGAGTTGGGGGAATCACTGGCCACTTGCAAACTGCCACTTCACTGCTTGGGACTGAGGACTTaGCTGCTGAGAAAAGAAACA +
Preference number: 2 (lower is better)
Translates to: LSLELGESLATCKLPLHCLGLRT*LLRKET
Trigger: TGTTTCTTTTCTCAGCAGCCAAGTCCTCAGTCCCAA...GCAGTGAAGTGGCAGTTTGCAAGTGGCCAGTGATTCCCCCAACTCCAAAGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR CAA 90 bp TTGAAGAAGTCGTCAGTGGCAGAGCCACGGAATGGGTCACTTTCTTaGAAAGGGTCCCCTCCAAATGGATCTGTTGAAGTTGTCTGCTGT +
Preference number: 2 (lower is better)
Translates to: LKKSSVAEPRNGSLS*KGSPPNGSVEVVCC
Trigger: ACAGCAGACAACTTCAACAGATCCATTTGGAGGGGACCCTTTCAAAGAAAGTGACCCATTCCGTGGCTCTGCCACTGACGACTTCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR GCA 90 bp GCGTTTTCAGTGATGAGATCATCTGAGTCTCATCCTGGCACTTCTGCCGGACGTTCATCTCGATCCAAGTaGCCATCCTTGTCAATGTCA +
Preference number: 2 (lower is better)
Translates to: AFSVMRSSESHPGTSAGRSSRSK*PSLSMS
Trigger: TGACATTGACAAGGATGGGCACTTGGATCGAGATGA...ACGTCCGGCAGAAGTGCCAGGATGAGACTCAGATGATCTCATCACTGAAAACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR GCA 90 bp AGCAACACATTTGCTTTTCAAGGTGTTCCTTGTGGAAACACACATACACATAGACAGCATGGCCACCTGTaGCAGGCTGCAAGGCCTGGT +
Preference number: 2 (lower is better)
Translates to: SNTFAFQGVPCGNTHTHRQHGHL*QAARPG
Trigger: ACCAGGCCTTGCAGCCTGGCACAGGTGGCCATGCTG...TCTATGTGTATGTGTGTTTCCACAAGGAACACCTTGAAAAGCAAATGTGTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR CCA 90 bp GTGTGGTGTTTAGAGAGCACGAGCGCTCACTCTTATTCCAGGGAGGAAGAGGAATCTTGGACTTTGTTCTaGAAGCCAGGATTCAGCATG +
Preference number: 2 (lower is better)
Translates to: VWCLESTSAHSYSREEEESWTLF*KPGFSM
Trigger: CATGCTGAATCCTGGCTTCCAGAACAAAGTCCAAGA...TTCCTCTTCCTCCCTGGAATAAGAGTGAGCGCTCGTGCTCTCTAAACACCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR CCA 90 bp GGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGGAGTCTTGGACTTTGTTCTaGAAGCCAGGATTCAGCATG +
Preference number: 2 (lower is better)
Translates to: GGYGNHLITSPREKRVWESWTLF*KPGFSM
Trigger: CATGCTGAATCCTGGCTTCCAGAACAAAGTCCAAGA...CTCCCATACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR TCA 90 bp AGGTCACACCTGTCTTGGTATCAGGGGCTCAAGAGCTCTCAAAAATGTAAGGGGGTGGGGTTTCCACAATaGGCAGAAACTGATCCAATT +
Preference number: 2 (lower is better)
Translates to: RSHLSWYQGLKSSQKCKGVGFPQ*AETDPI
Trigger: AATTGGATCAGTTTCTGCTCATTGTGGAAACCCCAC...CCCCTTACATTTTTGAGAGCTCTTGAGCCCCTGATACCAAGACAGGTGTGACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR GCA 90 bp TTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTAAATCCCAGGGAAGCTaGAAGCGGAAGGGAGTGGGG +
Preference number: 2 (lower is better)
Translates to: FFLQKWQCRINNARDRECKSQGS*KRKGVG
Trigger: CCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTT...ACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
3UTR-3UTR CCA 90 bp GCGTTTTCAGTGATGAGATCATCTGAGTCTCATCCTGGCACTTCTGCCGGACGTATAGCTAACGCGAATTaGTCTTTGCTTAACTTCCCC +
Preference number: 2 (lower is better)
Translates to: AFSVMRSSESHPGTSAGRIANAN*SLLNFP
Trigger: GGGGAAGTTAAGCAAAGACCAATTCGCGTTAGCTAT...ACGTCCGGCAGAAGTGCCAGGATGAGACTCAGATGATCTCATCACTGAAAACGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR CCA 90 bp ATACTTCCGCAGAGATGGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTGTGAACGCGCAAAGTaGCAGCAAAAACAACAGACA +
Preference number: 2 (lower is better)
Translates to: ILPQRWRAFKTGSERIQACERAK*QQKQQT
Trigger: TGTCTGTTGTTTTTGCTGCCACTTTGCGCGTTCACA...GGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCCATCTCTGCGGAAGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR CAA 90 bp TTCGTGAATGGATCCGAGGTAAATGGGTCATTCTTTGTCTGTTTCTaGAAGAAGTCGTCAGTGGCAGAGCCACGGAATGGGTCACTTTCT +
Preference number: 2 (lower is better)
Translates to: FVNGSEVNGSFFVCF*KKSSVAEPRNGSLS
Trigger: AGAAAGTGACCCATTCCGTGGCTCTGCCACTGACGACTTCTTCAAGAAACAGACAAAGAATGACCCATTTACCTCGGATCCATTCACGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR CAA 90 bp CAGAAACTGATCCAATTTTGGTTAAGTTTGAGAAGCCCTCTGAACTaGGGTGGTTGGCCCAATGTAAATACTTCCGCAGAGATGGAGGGC +
Preference number: 2 (lower is better)
Translates to: QKLIQFWLSLRSPLN*GGWPNVNTSAEMEG
Trigger: GCCCTCCATCTCTGCGGAAGTATTTACATTGGGCCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAACCAAAATTGGATCAGTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR TCA 90 bp TTTGTCTCCAGAGAGCAAACCATTGATGGGCAAGAGGCTTTCAAAAATCCCATCCTGCTGGTGTCGTGCTaGGAAGAGAGAGAAACATTC +
Preference number: 2 (lower is better)
Translates to: FVSREQTIDGQEAFKNPILLVSC*EERETF
Trigger: GAATGTTTCTCTCTCTTCTCAGCACGACACCAGCAG...GATGGGATTTTTGAAAGCCTCTTGCCCATCAATGGTTTGCTCTCTGGAGACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596037.5
3UTR-3UTR TCA 90 bp AAACATAACCAAAATTTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCAACCAACGTTGGCCATaGACAGATCTGGCGGGTGGG +
Preference number: 2 (lower is better)
Translates to: KHNQNFRRGQFLLERATPNQRWP*TDLAGG
Trigger: CCCACCCGCCAGATCTGTTCATGGCCAACGTTGGTT...GGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAAATTTTGGTTATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR CCA 90 bp AAGTGCATGGCCACAGCGAACTCATCTCGATCCAAGTGCCCATCCTTGTCAATGGTGAAATTTAGGCGGTaGCATGCTCAAATTCAGATT +
Preference number: 2 (lower is better)
Translates to: KCMATANSSRSKCPSLSMVKFRR*HAQIQI
Trigger: AATCTGAATTTGAGCATGCCACCGCCTAAATTTCAC...CATTGACAAGGATGGGCACTTGGATCGAGATGAGTTCGCTGTGGCCATGCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR CAA 90 bp GATCCAATTTTGGTTAAGTTTGAGAAGCCCTCTGAACTTGGGTGGTaGGCCCAATGTAAATACTTCCGCAGAGATGGAGGGCATTCAAAA +
Preference number: 2 (lower is better)
Translates to: DPILVKFEKPSELGW*AQCKYFRRDGGHSK
Trigger: TTTTGAATGCCCTCCATCTCTGCGGAAGTATTTACATTGGGCCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAACCAAAATTGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR CCA 90 bp TTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTAACCCCTTTTTACTTTaGAACGGGTCGCCGCTGTCA +
Preference number: 2 (lower is better)
Translates to: FFLQKWQCRINNARDRECNPFLL*NGSPLS
Trigger: TGACAGCGGCGACCCGTTCCAAAGTAAAAAGGGGTT...ACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
3UTR-3UTR CCA 90 bp AAACATAACCAAAATTTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCAACAGATCTGGCGGGTaGGATGTTCTGCTGTCACAC +
Preference number: 2 (lower is better)
Translates to: KHNQNFRRGQFLLERATPNRSGG*DVLLSH
Trigger: GTGTGACAGCAGAACATCCCACCCGCCAGATCTGTT...GGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAAATTTTGGTTATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR CAA 90 bp AAGGGGTCTTCTGTCTGGAAAGGATCCGGATGCAACTCTTGCGTGTaGTTGCTAAATAACAAGGCTTTATTTTTGAAAGGATCATCCATG +
Preference number: 2 (lower is better)
Translates to: KGSSVWKGSGCNSCV*LLNNKALFLKGSSM
Trigger: CATGGATGATCCTTTCAAAAATAAAGCCTTGTTATTTAGCAACAACACGCAAGAGTTGCATCCGGATCCTTTCCAGACAGAAGACCCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR TCA 90 bp CTCGGTTCAGATCGTCTTCCTGGGACTTTAAGTCAGATTCCTGAGATTGGATTTTTACTGACCTTCTGCTaGATGAAATACATAGCTAAC +
Preference number: 2 (lower is better)
Translates to: LGSDRLPGTLSQIPEIGFLLTFC*MKYIAN
Trigger: GTTAGCTATGTATTTCATTCAGCAGAAGGTCAGTAA...AAATCCAATCTCAGGAATCTGACTTAAAGTCCCAGGAAGACGATCTGAACCGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR CCA 90 bp AGCAACACATTTGCTTTTCAAGGTGTTCCTTGTGGAAACACACATACACATAGAATACTTCCGCAGAGATaGAGGGCATTCAAAACAGGT +
Preference number: 2 (lower is better)
Translates to: SNTFAFQGVPCGNTHTHRILPQR*RAFKTG
Trigger: ACCTGTTTTGAATGCCCTCCATCTCTGCGGAAGTAT...TCTATGTGTATGTGTGTTTCCACAAGGAACACCTTGAAAAGCAAATGTGTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR CAA 90 bp ACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGACGGTGTGTCCCGAGTCCCGGTCCTaGGAGTACGGTGGCGACGGT +
Preference number: 3 (lower is better)
Translates to: TLNKPPSPGPWSTVATVCPESRS*EYGGDG
Trigger: ACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGG...ACACACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
3UTR CCA 72 bp GAACGGGTCGCCGCTGTCAGCCCCGAGTGGCTGGAATaGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAG +
Preference number: 3 (lower is better)
Translates to: ERVAAVSPEWLE*IGGLGKVCGTK
Trigger: CTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGACAGCGGCGACCCGTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
3UTR CCA 72 bp AGGCTCCCTGTGCTGTTGAGGCTGCTGACGCTGCCGTaGGACGGCGTGGAGCGGAGGCTGTCTTTTGGTGGG +
Preference number: 3 (lower is better)
Translates to: RLPVLLRLLTLP*DGVERRLSFGG
Trigger: CCCACCAAAAGACAGCCTCCGCTCCACGCCGTCCCACGGCAGCGTCAGCAGCCTCAACAGCACAGGGAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000593760.5
3UTR CCA 72 bp TGCCCCTCTCTGCCAGGGAGACGCCTTCGCTCAGGTTaGCCAGGTCGGTCAGGCTGGCACCATGGGCTCCAT +
Preference number: 3 (lower is better)
Translates to: CPSLPGRRLRSG*PGRSGWHHGLH
Trigger: ATGGAGCCCATGGTGCCAGCCTGACCGACCTGGCCAACCTGAGCGAAGGCGTCTCCCTGGCAGAGAGGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR CAA 90 bp TCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAGAGCGGGAGGCATTCTCGCTCTCCCGCTaGGCCCACGCCAGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: SSPRLTAVCSSPEEEREAFSLSR*AHASCC
Trigger: GCAGCAGCTGGCGTGGGCCAAGCGGGAGAGCGAGAA...TGCCTCCCGCTCTTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602022.5
3UTR GCA 72 bp CACCAGCTGAGTGAACACGGGGCAGCCAAGGGAGACTaGCCAGTCACACTGGCACCTGGGGCACCTGGGCAT +
Preference number: 3 (lower is better)
Translates to: HQLSEHGAAKGD*PVTLAPGAPGH
Trigger: ATGCCCAGGTGCCCCAGGTGCCAGTGTGACTGGGCAGTCTCCCTTGGCTGCCCCGTGTTCACTCAGCTGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR CCA 72 bp CTTTGGAACGGGTCGCCGCTGTCAGCCCCGAGTGGCTaGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAA +
Preference number: 3 (lower is better)
Translates to: LWNGSPLSAPSG*NGSGASGKSAE
Trigger: TTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGACAGCGGCGACCCGTTCCAAAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
3UTR CCA 72 bp TCGGTCAGGCTGGCACCATGGGCTCCATCGAGCACCTaGTCATACTGCTCCAGGCTCCTGTGGGCCTCCTGG +
Preference number: 3 (lower is better)
Translates to: SVRLAPWAPSST*SYCSRLLWASW
Trigger: CCAGGAGGCCCACAGGAGCCTGGAGCAGTATGACCAGGTGCTCGATGGAGCCCATGGTGCCAGCCTGACCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR CAA 90 bp GGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGCAGGCATGTCAGCCTaGCTGAGCGCGATGGCCAGT +
Preference number: 3 (lower is better)
Translates to: GLAAESAHPEQAPESRSLAGMSA*LSAMAS
Trigger: ACTGGCCATCGCGCTCAGCAAGGCTGACATGCCTGC...CAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602022.5
3UTR CCA 72 bp TCGCTCAGGTTGGCCAGGTCGGTCAGGCTGGCACCATaGGCTCCATCGAGCACCTGGTCATACTGCTCCAGG +
Preference number: 3 (lower is better)
Translates to: SLRLARSVRLAP*APSSTWSYCSR
Trigger: CCTGGAGCAGTATGACCAGGTGCTCGATGGAGCCCATGGTGCCAGCCTGACCGACCTGGCCAACCTGAGCGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR CCA 72 bp CCAGCCTCTCCTGTTCCGCCTTCTCGCTCTCCCGCTTaGCCCACGCCAGCTGCTGCTCCTCATTGCCAAAAG +
Preference number: 3 (lower is better)
Translates to: PASPVPPSRSPA*PTPAAAPHCQK
Trigger: CTTTTGGCAATGAGGAGCAGCAGCTGGCGTGGGCCAAGCGGGAGAGCGAGAAGGCGGAACAGGAGAGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602022.5
3UTR CCA 72 bp GCCACCGTGTGGCCAACGTTTTCTGCTTTCGGGAGATaGTTTCCCGCCTGCCCAGGAGCCTGTGCACTGGGC +
Preference number: 3 (lower is better)
Translates to: ATVWPTFSAFGR*FPACPGACALG
Trigger: GCCCAGTGCACAGGCTCCTGGGCAGGCGGGAAACCATCTCCCGAAAGCAGAAAACGTTGGCCACACGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR-3UTR CAA 90 bp AGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCACCCCGAGTCCCGGTCCTaGGAGTACGGTGGCGACGGT +
Preference number: 3 (lower is better)
Translates to: RASPGDVTFPGLAAESAHPESRS*EYGGDG
Trigger: ACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGG...GTGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
3UTR-3UTR CAA 90 bp GCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGACTCAACTTACAGAGGTAGCATGTCTCGGAGCTaGGCCTTCTGCTGGTCCATC +
Preference number: 3 (lower is better)
Translates to: ASGREWGGPEAEDSTYRGSMSRS*AFCWSI
Trigger: GATGGACCAGCAGAAGGCCAAGCTCCGAGACATGCT...ACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR TCA 72 bp GACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCACCCTaGACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGG +
Preference number: 3 (lower is better)
Translates to: DLSRSCSRVCSP*TSPRVPVLGVR
Trigger: CCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGACCTGGAAAGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
3UTR GCA 72 bp GAGCCCTGGGAGAGAGGGTGGCAGCACGGAGAGAGCTaGTGGAGGCAGCAGAGCACCAAGGAAACATCCAGA +
Preference number: 3 (lower is better)
Translates to: EPWERGWQHGES*WRQQSTKETSR
Trigger: TCTGGATGTTTCCTTGGTGCTCTGCTGCCTCCAGCAGCTCTCTCCGTGCTGCCACCCTCTCTCCCAGGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR GCA 72 bp GTAAACACACACCCTGCCTCGGTCAGAAGTGGGATCTaGTGCGCCGCCAGGGCACGCACACACGCGTCTTTG +
Preference number: 3 (lower is better)
Translates to: VNTHPASVRSGI*CAARARTHASL
Trigger: CAAAGACGCGTGTGTGCGTGCCCTGGCGGCGCAGCAGATCCCACTTCTGACCGAGGCAGGGTGTGTGTTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR GCA 72 bp CCCTCTGCCCAGGCTCATCTGTGTAAACACACACCCTaGCTCGGTCAGAAGTGGGATCTGCTGCGCCGCCAG +
Preference number: 3 (lower is better)
Translates to: PSAQAHLCKHTP*LGQKWDLLRRQ
Trigger: CTGGCGGCGCAGCAGATCCCACTTCTGACCGAGGCAGGGTGTGTGTTTACACAGATGAGCCTGGGCAGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR GCA 72 bp CTGAGGGACTGCTGCCACCGTGTGGCCAACGTTTTCTaGTTTCGGGAGATGGTTTCCCGCCTGCCCAGGAGC +
Preference number: 3 (lower is better)
Translates to: LRDCCHRVANVF*FREMVSRLPRS
Trigger: GCTCCTGGGCAGGCGGGAAACCATCTCCCGAAAGCAGAAAACGTTGGCCACACGGTGGCAGCAGTCCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR CCA 72 bp TTTACTTTGGAACGGGTCGCCGCTGTCAGCCCCGAGTaGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGC +
Preference number: 3 (lower is better)
Translates to: FTLERVAAVSPE*LEWIGGLGKVC
Trigger: GCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGACAGCGGCGACCCGTTCCAAAGTAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
3UTR CCA 72 bp AGACGCCTTCGCTCAGGTTGGCCAGGTCGGTCAGGCTaGCACCATGGGCTCCATCGAGCACCTGGTCATACT +
Preference number: 3 (lower is better)
Translates to: RRLRSGWPGRSG*HHGLHRAPGHT
Trigger: AGTATGACCAGGTGCTCGATGGAGCCCATGGTGCCAGCCTGACCGACCTGGCCAACCTGAGCGAAGGCGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR CCA 72 bp CATCTGTGTAAACACACACCCTGCCTCGGTCAGAAGTaGGATCTGCTGCGCCGCCAGGGCACGCACACACGC +
Preference number: 3 (lower is better)
Translates to: HLCKHTPCLGQK*DLLRRQGTHTR
Trigger: GCGTGTGTGCGTGCCCTGGCGGCGCAGCAGATCCCACTTCTGACCGAGGCAGGGTGTGTGTTTACACAGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR TCA 72 bp CCCCAAGATGCTCAGAGACTCATCTGCTCCACCAGCTaGGTGAACACGGGGCAGCCAAGGGAGACTGCCCAG +
Preference number: 3 (lower is better)
Translates to: PQDAQRLICSTS*VNTGQPRETAQ
Trigger: CTGGGCAGTCTCCCTTGGCTGCCCCGTGTTCACTCAGCTGGTGGAGCAGATGAGTCTCTGAGCATCTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR GCA 72 bp AACACACACCCTGCCTCGGTCAGAAGTGGGATCTGCTaGGCCGCCAGGGCACGCACACACGCGTCTTTGAAA +
Preference number: 3 (lower is better)
Translates to: NTHPASVRSGIC*AARARTHASLK
Trigger: TTTCAAAGACGCGTGTGTGCGTGCCCTGGCGGCGCAGCAGATCCCACTTCTGACCGAGGCAGGGTGTGTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR CCA 72 bp CGGCCCATCCGCTCCCGGAACAGCACCAAGACGAAATaGGAAACTACATGTCCCCAGGTTCGAGGCTGCAGG +
Preference number: 3 (lower is better)
Translates to: RPIRSRNSTKTK*ETTCPQVRGCR
Trigger: CCTGCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCGTCTTGGTGCTGTTCCGGGAGCGGATGGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR CCA 72 bp CCCTGGGAGAGAGGGTGGCAGCACGGAGAGAGCTGCTaGAGGCAGCAGAGCACCAAGGAAACATCCAGACAT +
Preference number: 3 (lower is better)
Translates to: PWERGWQHGESC*RQQSTKETSRH
Trigger: ATGTCTGGATGTTTCCTTGGTGCTCTGCTGCCTCCAGCAGCTCTCTCCGTGCTGCCACCCTCTCTCCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR TCA 72 bp CAGCCGCCTGCACTTGGCTGGAACCAACGTTGGCCATaGACAGATCTGGCGGGTGGGATGTTCTGCTGTCAC +
Preference number: 3 (lower is better)
Translates to: QPPALGWNQRWP*TDLAGGMFCCH
Trigger: GTGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCCAACGTTGGTTCCAGCCAAGTGCAGGCGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR GCA 72 bp GAAAGGATCATCCATGGCTCCAAAACTGCCCCTCTCTaGCAGGGAGACGCCTTCGCTCAGGTTGGCCAGGTC +
Preference number: 3 (lower is better)
Translates to: ERIIHGSKTAPL*QGDAFAQVGQV
Trigger: GACCTGGCCAACCTGAGCGAAGGCGTCTCCCTGGCAGAGAGGGGCAGTTTTGGAGCCATGGATGATCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR GCA 72 bp GCCTTCTCGCTCTCCCGCTTGGCCCACGCCAGCTGCTaGTCCTCATTGCCAAAAGAGGTGAAGTCTGCAAAG +
Preference number: 3 (lower is better)
Translates to: AFSLSRLAHASC*SSLPKEVKSAK
Trigger: CTTTGCAGACTTCACCTCTTTTGGCAATGAGGAGCAGCAGCTGGCGTGGGCCAAGCGGGAGAGCGAGAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602022.5
3UTR GCA 72 bp GACAACCAGAAACGACCAGGACGCCTGAGGGACTGCTaGCACCGTGTGGCCAACGTTTTCTGCTTTCGGGAG +
Preference number: 3 (lower is better)
Translates to: DNQKRPGRLRDC*HRVANVFCFRE
Trigger: CTCCCGAAAGCAGAAAACGTTGGCCACACGGTGGCAGCAGTCCCTCAGGCGTCCTGGTCGTTTCTGGTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR GCA 72 bp TGCGACAACCAGAAACGACCAGGACGCCTGAGGGACTaGTGCCACCGTGTGGCCAACGTTTTCTGCTTTCGG +
Preference number: 3 (lower is better)
Translates to: CDNQKRPGRLRD*CHRVANVFCFR
Trigger: CCGAAAGCAGAAAACGTTGGCCACACGGTGGCAGCAGTCCCTCAGGCGTCCTGGTCGTTTCTGGTTGTCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR CCA 72 bp CTGGAACCAACGTTGGCCATGAACAGATCTGGCGGGTaGGATGTTCTGCTGTCACACCAGGGGACCAGAGCC +
Preference number: 3 (lower is better)
Translates to: LEPTLAMNRSGG*DVLLSHQGTRA
Trigger: GGCTCTGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCCAACGTTGGTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR CAA 90 bp TGCCTCTCTCCGAAGGCGGGACCATGTCCGGCGAGAGGACTTGAGGAGGGTCGATTCATGAGGACTGGCTaGACTTTGTCTCCAGAGAGC +
Preference number: 3 (lower is better)
Translates to: CLSPKAGPCPARGLEEGRFMRTG*TLSPES
Trigger: GCTCTCTGGAGACAAAGTCAAGCCAGTCCTCATGAA...TCGACCCTCCTCAAGTCCTCTCGCCGGACATGGTCCCGCCTTCGGAGAGAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR CAA 90 bp CCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTAGACAGCCGCCTGCACTaGGCTGGAACCAACGTTGGC +
Preference number: 3 (lower is better)
Translates to: PGGGYGNHLITSPREKRVDSRLH*AGTNVG
Trigger: GCCAACGTTGGTTCCAGCCAAGTGCAGGCGGCTGTC...TACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR CAA 90 bp GGGGAAGCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAAGCTGCTGCTCCTCATaGCCAAAAGAGGTGAAGTCT +
Preference number: 3 (lower is better)
Translates to: GEALGASSPRLTAVCSSPSCCSS*PKEVKS
Trigger: AGACTTCACCTCTTTTGGCAATGAGGAGCAGCAGCT...TGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602022.5
3UTR-3UTR CAA 90 bp CCGGCACCGCCAATAGGAAGTGAGACCGGCTCTGAAATCACAGCTGCATGTGTGGGGGCTGTGTTCTGCTaGTGGCTACTGCCTCTTCCC +
Preference number: 3 (lower is better)
Translates to: PAPPIGSETGSEITAACVGAVFC*WLLPLP
Trigger: GGGAAGAGGCAGTAGCCACAAGCAGAACACAGCCCC...CACACATGCAGCTGTGATTTCAGAGCCGGTCTCACTTCCTATTGGCGGTGCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR-3UTR CAA 90 bp GCTGGGCGGTTTAGGCCGTGGAGGAGCAGGTTTCTTCGGAGGCAGAGCAGGAGTAGGGATCTGATCCTTTaGAGGAGACACTGGAGGATG +
Preference number: 3 (lower is better)
Translates to: AGRFRPWRSRFLRRQSRSRDLIL*RRHWRM
Trigger: CATCCTCCAGTGTCTCCTCAAAAGGATCAGATCCCT...ACTCCTGCTCTGCCTCCGAAGAAACCTGCTCCTCCACGGCCTAAACCGCCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR CAA 90 bp TTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCTGGGGCGCTGCTTGCGACAGCCGCCTGCACTaGGCTGGAACCAACGTTGGC +
Preference number: 3 (lower is better)
Translates to: FRRGQFLLERATPWGAACDSRLH*AGTNVG
Trigger: GCCAACGTTGGTTCCAGCCAAGTGCAGGCGGCTGTC...GCAAGCAGCGCCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR TCA 72 bp GCGCTCACTCTTATTCCAGGGAGGAAGAGGAATCCATaGCGTACAGAGGCCCAGGAGCAGAAGGGCTCCAGG +
Preference number: 3 (lower is better)
Translates to: ALTLIPGRKRNP*RTEAQEQKGSR
Trigger: CCTGGAGCCCTTCTGCTCCTGGGCCTCTGTACGTCATGGATTCCTCTTCCTCCCTGGAATAAGAGTGAGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR TCA 72 bp AAGATGCTCAGAGACTCATCTGCTCCACCAGCTGAGTaGACACGGGGCAGCCAAGGGAGACTGCCCAGTCAC +
Preference number: 3 (lower is better)
Translates to: KMLRDSSAPPAE*TRGSQGRLPSH
Trigger: GTGACTGGGCAGTCTCCCTTGGCTGCCCCGTGTTCACTCAGCTGGTGGAGCAGATGAGTCTCTGAGCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR TCA 72 bp TTCTGCCAGTCCCAAACCGTGTCACAGCGTGGCATATaGGGGATGGAGGCCTTCTCCGTGTGCTGGAAGGAG +
Preference number: 3 (lower is better)
Translates to: FCQSQTVSQRGI*GMEAFSVCWKE
Trigger: CTCCTTCCAGCACACGGAGAAGGCCTCCATCCCTCATATGCCACGCTGTGACACGGTTTGGGACTGGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR GCA 72 bp GACAGATCCAGCCTCCCAAAGGAAGAGGAGTCCACTTaGGACAACCAGAAACGACCAGGACGCCTGAGGGAC +
Preference number: 3 (lower is better)
Translates to: DRSSLPKEEEST*DNQKRPGRLRD
Trigger: GTCCCTCAGGCGTCCTGGTCGTTTCTGGTTGTCGCAAGTGGACTCCTCTTCCTTTGGGAGGCTGGATCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR CCA 72 bp CTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTaGAGTACGGTGGCGACGGTGTGTGTGTGTATATAT +
Preference number: 3 (lower is better)
Translates to: LLTLNKPPSPGP*STVATVCVCIY
Trigger: ATATATACACACACACACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
3UTR CCA 72 bp GGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTaGCTTACAGGTGTACTTTTACCGCTGGGCGGTTTA +
Preference number: 3 (lower is better)
Translates to: GSGASGKSAEPS*LTGVLLPLGGL
Trigger: TAAACCGCCCAGCGGTAAAAGTACACCTGTAAGCCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR CCA 72 bp CACTTGGCTGGAACCAACGTTGGCCATGAACAGATCTaGCGGGTGGGATGTTCTGCTGTCACACCAGGGGAC +
Preference number: 3 (lower is better)
Translates to: HLAGTNVGHEQI*RVGCSAVTPGD
Trigger: GTCCCCTGGTGTGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCCAACGTTGGTTCCAGCCAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR CAA 90 bp AGTGGGGTGGCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGAAACCCCTTTTTACTTaGGAACGGGTCGCCGCTGTC +
Preference number: 3 (lower is better)
Translates to: SGVARRRRTQLTEVKSAKKPLFT*ERVAAV
Trigger: GACAGCGGCGACCCGTTCCAAAGTAAAAAGGGGTTT...CTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGCCACCCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
3UTR-3UTR CAA 90 bp CGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCAGGGGCAGACTCTGGTTGGCTGGAACCAACGTaGGCCATGAACAGATCTGGC +
Preference number: 3 (lower is better)
Translates to: RNGKLHVPRFEAAGADSGWLEPT*AMNRSG
Trigger: GCCAGATCTGTTCATGGCCAACGTTGGTTCCAGCCA...ACCAGAGTCTGCCCCTGCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR TCA 72 bp AGTGAGACCGGCTCTGAAATCACAGCTGCATGTGTGTaGAGAGCCCCTGGTTTCAGGGCCCAAGGACAGGCA +
Preference number: 3 (lower is better)
Translates to: SETGSEITAACV*RAPGFRAQGQA
Trigger: TGCCTGTCCTTGGGCCCTGAAACCAGGGGCTCTTCACACACATGCAGCTGTGATTTCAGAGCCGGTCTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR GCA 72 bp TTTGTTCTGGAAGCCAGGATTCAGCATGGCCACCTGTaGCAGGCTGCAAGGCCTGGTGTGAACGCGCAAAGT +
Preference number: 3 (lower is better)
Translates to: FVLEARIQHGHL*QAARPGVNAQS
Trigger: ACTTTGCGCGTTCACACCAGGCCTTGCAGCCTGGCACAGGTGGCCATGCTGAATCCTGGCTTCCAGAACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR CCA 72 bp TACAGGTGTACTTTTACCGCTGGGCGGTTTAGGCCGTaGAGGAGCAGGTTTCTTCGGAGGCAGAGCAGGAGT +
Preference number: 3 (lower is better)
Translates to: YRCTFTAGRFRP*RSRFLRRQSRS
Trigger: ACTCCTGCTCTGCCTCCGAAGAAACCTGCTCCTCCACGGCCTAAACCGCCCAGCGGTAAAAGTACACCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR CCA 72 bp GATTCAGCATGGCCACCTGTGCCAGGCTGCAAGGCCTaGTGTGAACGCGCAAAGTGGCAGCAAAAACAACAG +
Preference number: 3 (lower is better)
Translates to: DSAWPPVPGCKA*CERAKWQQKQQ
Trigger: CTGTTGTTTTTGCTGCCACTTTGCGCGTTCACACCAGGCCTTGCAGCCTGGCACAGGTGGCCATGCTGAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR CAA 90 bp CATCCTGTTTCTGAGCCTCGAGCTCCTGCAAACTGCTTGTTTCCCGGTCTAGGTGTTGGCTGTGTTTGCTaGAGGCTGTGCTTGGGGGAC +
Preference number: 3 (lower is better)
Translates to: HPVSEPRAPANCLFPGLGVGCVC*RLCLGD
Trigger: GTCCCCCAAGCACAGCCTCAAGCAAACACAGCCAAC...ACCTAGACCGGGAAACAAGCAGTTTGCAGGAGCTCGAGGCTCAGAAACAGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR CAA 90 bp GCTGGGCGGTTTAGGCCGTGGAGGAGCAGGTTTCTTCGGAGGCAGAGCAGGAGTCTCCAAATGGATCTGTaGAAGTTGTCTGCTGTTCTG +
Preference number: 3 (lower is better)
Translates to: AGRFRPWRSRFLRRQSRSLQMDL*KLSAVL
Trigger: CAGAACAGCAGACAACTTCAACAGATCCATTTGGAG...ACTCCTGCTCTGCCTCCGAAGAAACCTGCTCCTCCACGGCCTAAACCGCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR CAA 90 bp GCCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTCTTCCCCATAAATCCTaGGGACTGAGGACTTGGCTG +
Preference number: 3 (lower is better)
Translates to: ARGRLWKPPHYESTRKESLPHKS*GLRTWL
Trigger: CAGCCAAGTCCTCAGTCCCAAGGATTTATGGGGAAG...ACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR TCA 72 bp TCTGCTGCGCCGCCAGGGCACGCACACACGCGTCTTTaGAAACCTGAACAGAATCTCAAGTGCTTCTCGGAA +
Preference number: 3 (lower is better)
Translates to: SAAPPGHAHTRL*KPEQNLKCFSE
Trigger: TTCCGAGAAGCACTTGAGATTCTGTTCAGGTTTTCAAAGACGCGTGTGTGCGTGCCCTGGCGGCGCAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR GCA 72 bp CATATGTGTGCTAGAAGGTTCTGGGTGAGGCCCGAGTaGATGAAGATCTCCTTCACCTCCTGGCCACTCACG +
Preference number: 3 (lower is better)
Translates to: HMCARRFWVRPE*MKISFTSWPLT
Trigger: CGTGAGTGGCCAGGAGGTGAAGGAGATCTTCATGCACTCGGGCCTCACCCAGAACCTTCTAGCACACATATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR CCA 72 bp CTAAATCTTCTGCCAGTCCCAAACCGTGTCACAGCGTaGCATATGAGGGATGGAGGCCTTCTCCGTGTGCTG +
Preference number: 3 (lower is better)
Translates to: LNLLPVPNRVTA*HMRDGGLLRVL
Trigger: CAGCACACGGAGAAGGCCTCCATCCCTCATATGCCACGCTGTGACACGGTTTGGGACTGGCAGAAGATTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR-3UTR CAA 90 bp GGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGTGGCTGGAACCAACGTaGGCCATGAACAGATCTGGC +
Preference number: 3 (lower is better)
Translates to: GGGYGNHLITSPREKRVWWLEPT*AMNRSG
Trigger: GCCAGATCTGTTCATGGCCAACGTTGGTTCCAGCCA...CCATACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR GCA 72 bp TGTGATCACAAGTTGCGACCGCTGCCAACCCCAAGATaGTCAGAGACTCATCTGCTCCACCAGCTGAGTGAA +
Preference number: 3 (lower is better)
Translates to: CDHKLRPLPTPR*SETHLLHQLSE
Trigger: TTCACTCAGCTGGTGGAGCAGATGAGTCTCTGAGCATCTTGGGGTTGGCAGCGGTCGCAACTTGTGATCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR CCA 72 bp GGGTTTCCTCCTGCTGCAATCGGTTCAGCTCCGACTTaGCTCGGTTCAGATCGTCTTCCTGGGACTTTAAGT +
Preference number: 3 (lower is better)
Translates to: GFPPAAIGSAPT*LGSDRLPGTLS
Trigger: ACTTAAAGTCCCAGGAAGACGATCTGAACCGAGCCAAGTCGGAGCTGAACCGATTGCAGCAGGAGGAAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR CAA 90 bp GGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGGAGACCCTGGGGCGCTGCTaGCCATTACTTCCTCATCTT +
Preference number: 3 (lower is better)
Translates to: GGYGNHLITSPREKRVWETLGRC*PLLPHL
Trigger: AAGATGAGGAAGTAATGGCAAGCAGCGCCCCAGGGT...CTCCCATACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR CAA 90 bp CCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTAGAGGCCAATTCTTACTaGAAAGAGCAACACCCTGGG +
Preference number: 3 (lower is better)
Translates to: PGGGYGNHLITSPREKRVEANSY*KEQHPG
Trigger: CCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTC...TACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR TCA 72 bp GCCGCCAGGGCACGCACACACGCGTCTTTGAAAACCTaGACAGAATCTCAAGTGCTTCTCGGAATCTGTGTT +
Preference number: 3 (lower is better)
Translates to: AARARTHASLKT*TESQVLLGICV
Trigger: AACACAGATTCCGAGAAGCACTTGAGATTCTGTTCAGGTTTTCAAAGACGCGTGTGTGCGTGCCCTGGCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR GCA 72 bp GCTAACGCGAATTGGTCTTTGCTTAACTTCCCCGTTTaGCTCGTATCGGCCAGGGCCCATATGTGTGCTAGA +
Preference number: 3 (lower is better)
Translates to: ANANWSLLNFPV*LVSARAHMCAR
Trigger: TCTAGCACACATATGGGCCCTGGCCGATACGAGGCAAACGGGGAAGTTAAGCAAAGACCAATTCGCGTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR CAA 90 bp TTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCTGGGGCGCTGCTTGCGGCCTATCTTGGACTTaGTTCTGGAAGCCAGGATTC +
Preference number: 3 (lower is better)
Translates to: FRRGQFLLERATPWGAACGLSWT*FWKPGF
Trigger: GAATCCTGGCTTCCAGAACAAAGTCCAAGATAGGCC...GCAAGCAGCGCCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR CAA 90 bp AAGCCCGAGGCAGAGGCCTTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATGGGAAAATCCCATCAAATTaGGCCTTTTCTTCCACCCTC +
Preference number: 3 (lower is better)
Translates to: KPEAEALEGLAAEEGTNGKIPSN*AFSSTL
Trigger: GAGGGTGGAAGAAAAGGCCAAATTTGATGGGATTTT...CCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAAGGCCTCTGCCTCGGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR CAA 90 bp ACAGCGAACTCATCTCGATCCAAGTGCCCATCCTTGTCAATGTCACTGAGGTCCTTCATGAGGACTGGCTaGACTTTGTCTCCAGAGAGC +
Preference number: 3 (lower is better)
Translates to: TANSSRSKCPSLSMSLRSFMRTG*TLSPES
Trigger: GCTCTCTGGAGACAAAGTCAAGCCAGTCCTCATGAA...GGACCTCAGTGACATTGACAAGGATGGGCACTTGGATCGAGATGAGTTCGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000596037.5
3UTR-3UTR CAA 90 bp GGGGGAATCACTGGCCACTTGCAAACTGCCACTTCACTGCCAACTTTTATCCAAGGATCCAGGCCTATCTaGGACTTTGTTCTGGAAGCC +
Preference number: 3 (lower is better)
Translates to: GGITGHLQTATSLPTFIQGSRPI*DFVLEA
Trigger: GGCTTCCAGAACAAAGTCCAAGATAGGCCTGGATCC...TTGGATAAAAGTTGGCAGTGAAGTGGCAGTTTGCAAGTGGCCAGTGATTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR CAA 90 bp GGGGGAATCACTGGCCACTTGCAAACTGCCACTTCACTGCCAACTTTTATCCAAAAGGTCACACCTGTCTaGGTATCAGGGGCTCAAGAG +
Preference number: 3 (lower is better)
Translates to: GGITGHLQTATSLPTFIQKVTPV*VSGAQE
Trigger: CTCTTGAGCCCCTGATACCAAGACAGGTGTGACCTT...TTGGATAAAAGTTGGCAGTGAAGTGGCAGTTTGCAAGTGGCCAGTGATTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR TCA 72 bp CGTCAGTGGCAGAGCCACGGAATGGGTCACTTTCTTTaGAAGGGTCCCCTCCAAATGGATCTGTTGAAGTTG +
Preference number: 3 (lower is better)
Translates to: RQWQSHGMGHFL*KGPLQMDLLKL
Trigger: CAACTTCAACAGATCCATTTGGAGGGGACCCTTTCAAAGAAAGTGACCCATTCCGTGGCTCTGCCACTGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR GCA 72 bp AAAGGGTCCCCTCCAAATGGATCTGTTGAAGTTGTCTaGTGTTCTGCAAAGGGGTCATTCTGGAACGGGTCG +
Preference number: 3 (lower is better)
Translates to: KGSPPNGSVEVV*CSAKGSFWNGS
Trigger: CGACCCGTTCCAGAATGACCCCTTTGCAGAACAGCAGACAACTTCAACAGATCCATTTGGAGGGGACCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR CCA 72 bp GTTGAAGTTGTCTGCTGTTCTGCAAAGGGGTCATTCTaGAACGGGTCGCCTTTGAAGGGGTCAGCTCCTTTA +
Preference number: 3 (lower is better)
Translates to: VEVVCCSAKGSF*NGSPLKGSAPL
Trigger: TAAAGGAGCTGACCCCTTCAAAGGCGACCCGTTCCAGAATGACCCCTTTGCAGAACAGCAGACAACTTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR CAA 90 bp TTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATGGGTCTTTTCCACTAAACGGGAAACCCCTTTTTACTTaGGAACGGGTCGCCGCTGTC +
Preference number: 3 (lower is better)
Translates to: LEGLAAEEGTNGSFPLNGKPLFT*ERVAAV
Trigger: GACAGCGGCGACCCGTTCCAAAGTAAAAAGGGGTTT...CCCGTTTAGTGGAAAAGACCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
3UTR-3UTR CAA 90 bp CTGGATTCAAAGGGGTCGAGCTTCGAAGGTAAGGAAGGGTTTTTCGTGAATGGATCCAAGTGCCCATCCTaGTCAATGTCACTGAGGTCC +
Preference number: 3 (lower is better)
Translates to: LDSKGSSFEGKEGFFVNGSKCPS*SMSLRS
Trigger: GGACCTCAGTGACATTGACAAGGATGGGCACTTGGA...TCCATTCACGAAAAACCCTTCCTTACCTTCGAAGCTCGACCCCTTTGAATCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR CAA 90 bp CGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCAGGGGCAGACTCTGGTGAAACTGATCCAATTTaGGTTAAGTTTGAGAAGCCC +
Preference number: 3 (lower is better)
Translates to: RNGKLHVPRFEAAGADSGETDPI*VKFEKP
Trigger: GGGCTTCTCAAACTTAACCAAAATTGGATCAGTTTC...ACCAGAGTCTGCCCCTGCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR TCA 72 bp ACAGAATCTCAAGTGCTTCTCGGAATCTGTGTTCTGTaGTCACAAGTTGCGACCGCTGCCAACCCCAAGATG +
Preference number: 3 (lower is better)
Translates to: TESQVLLGICVL*SQVATAANPKM
Trigger: CATCTTGGGGTTGGCAGCGGTCGCAACTTGTGATCACAGAACACAGATTCCGAGAAGCACTTGAGATTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR GCA 72 bp AAAAACAGAGCTGCAAGGTCAGGGTTGAGCTCAGAATaGGGCTGTACAAGTGTCATGAAGGCAGCTGATGGA +
Preference number: 3 (lower is better)
Translates to: KNRAARSGLSSE*GCTSVMKAADG
Trigger: TCCATCAGCTGCCTTCATGACACTTGTACAGCCGCATTCTGAGCTCAACCCTGACCTTGCAGCTCTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR CCA 72 bp TTTCTTGAAGAAGTCGTCAGTGGCAGAGCCACGGAATaGGTCACTTTCTTTGAAAGGGTCCCCTCCAAATGG +
Preference number: 3 (lower is better)
Translates to: FLEEVVSGRATE*VTFFERVPSKW
Trigger: CCATTTGGAGGGGACCCTTTCAAAGAAAGTGACCCATTCCGTGGCTCTGCCACTGACGACTTCTTCAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR CCA 72 bp TGGTTAAGTTTGAGAAGCCCTCTGAACTTGGGTGGTTaGCCCAATGTAAATACTTCCGCAGAGATGGAGGGC +
Preference number: 3 (lower is better)
Translates to: WLSLRSPLNLGG*PNVNTSAEMEG
Trigger: GCCCTCCATCTCTGCGGAAGTATTTACATTGGGCCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR CCA 72 bp AGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCTaGGGCGCTGCTTGCCATTACTTCCTCATCTTTAGC +
Preference number: 3 (lower is better)
Translates to: RRGQFLLERATP*GAACHYFLIFS
Trigger: GCTAAAGATGAGGAAGTAATGGCAAGCAGCGCCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR TCA 72 bp AAGTTTGCTCCTTGCCTGGTTGATTTCGTCTTGCGTTaGCTTCAGGGACTTGATGATGGTTTCCAGCTGGAC +
Preference number: 3 (lower is better)
Translates to: KFAPCLVDFVLR*LQGLDDGFQLD
Trigger: GTCCAGCTGGAAACCATCATCAAGTCCCTGAAGTCAACGCAAGACGAAATCAACCAGGCAAGGAGCAAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR GCA 72 bp GAGCATCCTGTTTCTGAGCCTCGAGCTCCTGCAAACTaGTTGTTTCCCGGTCTAGGTCATTTTGTAATTCCT +
Preference number: 3 (lower is better)
Translates to: EHPVSEPRAPAN*LFPGLGHFVIP
Trigger: AGGAATTACAAAATGACCTAGACCGGGAAACAAGCAGTTTGCAGGAGCTCGAGGCTCAGAAACAGGATGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR GCA 72 bp TGGGAAAGTTTGCTCCTTGCCTGGTTGATTTCGTCTTaGGTTGACTTCAGGGACTTGATGATGGTTTCCAGC +
Preference number: 3 (lower is better)
Translates to: WESLLLAWLISS*VDFRDLMMVSS
Trigger: GCTGGAAACCATCATCAAGTCCCTGAAGTCAACGCAAGACGAAATCAACCAGGCAAGGAGCAAACTTTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR CCA 72 bp CCCTCAGATGTCCCCTGCCCCCTGATTAGTAGAATGTaGGGTTTCCACAATGAGCAGAAACTGATCCAATTT +
Preference number: 3 (lower is better)
Translates to: PSDVPCPLISRM*GFHNEQKLIQF
Trigger: AAATTGGATCAGTTTCTGCTCATTGTGGAAACCCCACATTCTACTAATCAGGGGGCAGGGGACATCTGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR CAA 90 bp CACAGCGAACTCATCTCGATCCAAGTGCCCATCCTTGTCAATGTCACTGAGGTCAAAATCCCATCAAATTaGGCCTTTTCTTCCACCCTC +
Preference number: 3 (lower is better)
Translates to: HSELISIQVPILVNVTEVKIPSN*AFSSTL
Trigger: GAGGGTGGAAGAAAAGGCCAAATTTGATGGGATTTT...GACCTCAGTGACATTGACAAGGATGGGCACTTGGATCGAGATGAGTTCGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000596037.5
3UTR-3UTR CAA 90 bp GAACGCTGGAATCAAAACAAGATAGTATTGGAGACCCATTTTCCACAGCTCTGTTTCTGTGATCACAAGTaGCGACCGCTGCCAACCCCA +
Preference number: 3 (lower is better)
Translates to: ERWNQNKIVLETHFPQLCFCDHK*RPLPTP
Trigger: TGGGGTTGGCAGCGGTCGCAACTTGTGATCACAGAA...ACAGAGCTGTGGAAAATGGGTCTCCAATACTATCTTGTTTTGATTCCAGCGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR-3UTR CAA 90 bp GTGTGGTGTTTAGAGAGCACGAGCGCTCACTCTTATTCCAGGGAGGAAGAGGAACAATTTTGGTTAAGTTaGAGAAGCCCTCTGAACTTG +
Preference number: 3 (lower is better)
Translates to: VWCLESTSAHSYSREEEEQFWLS*RSPLNL
Trigger: CAAGTTCAGAGGGCTTCTCAAACTTAACCAAAATTG...TTCCTCTTCCTCCCTGGAATAAGAGTGAGCGCTCGTGCTCTCTAAACACCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR CAA 90 bp GGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGGAGTTTTCAAGGTGTTCCTaGTGGAAACACACATACACA +
Preference number: 3 (lower is better)
Translates to: GGYGNHLITSPREKRVWEFSRCS*WKHTYT
Trigger: TGTGTATGTGTGTTTCCACAAGGAACACCTTGAAAA...CTCCCATACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR CCA 72 bp CCTTTAAATGGGTCAGATTTGAAGGGGTCTTCTGTCTaGAAAGGATCCGGATGCAACTCTTGCGTGTTGTTG +
Preference number: 3 (lower is better)
Translates to: PLNGSDLKGSSV*KGSGCNSCVLL
Trigger: CAACAACACGCAAGAGTTGCATCCGGATCCTTTCCAGACAGAAGACCCCTTCAAATCTGACCCATTTAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR CAA 90 bp CAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTACCAAAGAAGCTGGGAGGTTaGCCTTTAAAAGGAGACAAA +
Preference number: 3 (lower is better)
Translates to: QKWQCRINNARDRECEVPKKLGG*PLKGDK
Trigger: TTTGTCTCCTTTTAAAGGCAAACCTCCCAGCTTCTT...TGGTACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
3UTR-3UTR CAA 90 bp CTGGATTCAAAGGGGTCGAGCTTCGAAGGTAAGGAAGGGTTTTTCGTGAATGGATTCTTTGTCTGTTTCTaGAAGAAGTCGTCAGTGGCA +
Preference number: 3 (lower is better)
Translates to: LDSKGSSFEGKEGFFVNGFFVCF*KKSSVA
Trigger: TGCCACTGACGACTTCTTCAAGAAACAGACAAAGAA...TCCATTCACGAAAAACCCTTCCTTACCTTCGAAGCTCGACCCCTTTGAATCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR GCA 72 bp GATTTGAAGGGGTCTTCTGTCTGGAAAGGATCCGGATaGAACTCTTGCGTGTTGTTGCTAAATAACAAGGCT +
Preference number: 3 (lower is better)
Translates to: DLKGSSVWKGSG*NSCVLLLNNKA
Trigger: AGCCTTGTTATTTAGCAACAACACGCAAGAGTTGCATCCGGATCCTTTCCAGACAGAAGACCCCTTCAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR GCA 72 bp TTCTTACTTGAAAGAGCAACACCCTGGGGCGCTGCTTaGCATTACTTCCTCATCTTTAGCAACACATTTGCT +
Preference number: 3 (lower is better)
Translates to: FLLERATPWGAA*HYFLIFSNTFA
Trigger: AGCAAATGTGTTGCTAAAGATGAGGAAGTAATGGCAAGCAGCGCCCCAGGGTGTTGCTCTTTCAAGTAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR CAA 90 bp GTAAAAATCTGTCTTTGGAGTTGGGGGAATCACTGGCCACTTGCAAACTGCCACCAATTTTGGTTAAGTTaGAGAAGCCCTCTGAACTTG +
Preference number: 3 (lower is better)
Translates to: VKICLWSWGNHWPLANCHQFWLS*RSPLNL
Trigger: CAAGTTCAGAGGGCTTCTCAAACTTAACCAAAATTG...GTGGCAGTTTGCAAGTGGCCAGTGATTCCCCCAACTCCAAAGACAGATTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR CCA 72 bp ATTTTGGTTAAGTTTGAGAAGCCCTCTGAACTTGGGTaGTTGGCCCAATGTAAATACTTCCGCAGAGATGGA +
Preference number: 3 (lower is better)
Translates to: ILVKFEKPSELG*LAQCKYFRRDG
Trigger: TCCATCTCTGCGGAAGTATTTACATTGGGCCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAACCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR-3UTR CAA 90 bp AAACATAACCAAAATTTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCGGCCTATCTTGGACTTaGTTCTGGAAGCCAGGATTC +
Preference number: 3 (lower is better)
Translates to: KHNQNFRRGQFLLERATPGLSWT*FWKPGF
Trigger: GAATCCTGGCTTCCAGAACAAAGTCCAAGATAGGCC...GGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAAATTTTGGTTATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR TCA 72 bp GGAGCAAAGCGAGGAGTTCTGGCTTCTCGTAACTCATaGAGGATGAATGCTCATCGTTTAAATTTAGACGAT +
Preference number: 3 (lower is better)
Translates to: GAKRGVLASRNS*RMNAHRLNLDD
Trigger: ATCGTCTAAATTTAAACGATGAGCATTCATCCTTCATGAGTTACGAGAAGCCAGAACTCCTCGCTTTGCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR GCA 72 bp GGGTCTTCTGTCTGGAAAGGATCCGGATGCAACTCTTaGGTGTTGTTGCTAAATAACAAGGCTTTATTTTTG +
Preference number: 3 (lower is better)
Translates to: GSSVWKGSGCNS*VLLLNNKALFL
Trigger: CAAAAATAAAGCCTTGTTATTTAGCAACAACACGCAAGAGTTGCATCCGGATCCTTTCCAGACAGAAGACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR-3UTR CAA 90 bp AGCAACACATTTGCTTTTCAAGGTGTTCCTTGTGGAAACACACATACACATAGAGAAACTGATCCAATTTaGGTTAAGTTTGAGAAGCCC +
Preference number: 3 (lower is better)
Translates to: SNTFAFQGVPCGNTHTHRETDPI*VKFEKP
Trigger: GGGCTTCTCAAACTTAACCAAAATTGGATCAGTTTC...TCTATGTGTATGTGTGTTTCCACAAGGAACACCTTGAAAAGCAAATGTGTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR GCA 72 bp CTACATTCCCAAAGTAATTGTGTCTCAGGTAACCTTTaGCCTGCCCAAAAGATGAACAAAAATAACCAGAAA +
Preference number: 3 (lower is better)
Translates to: LHSQSNCVSGNL*PAQKMNKNNQK
Trigger: TTTCTGGTTATTTTTGTTCATCTTTTGGGCAGGGCAAAGGTTACCTGAGACACAATTACTTTGGGAATGTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp CTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGCCCTCGTCTGGAACCCGCCCGTaGCCTGTCCCGCCTACACAC +
Preference number: 4 (lower is better)
Translates to: LPPLWNPPVPCPAYTRPSSGTRP*PVPPTH
Trigger: GTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGA...CGAGGGCCGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR TCA 90 bp CCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGCCCTCGCCTAGGCACTGGGGGAGTGTCTaGCTGATGCGTGGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: PLWNPPVPCPAYTRPSPRHWGSV*LMRGRA
Trigger: CGCCCTCCCACGCATCAGTCAGACACTCCCCCAGTG...CCTAGGCGAGGGCCGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602022.5
CDS-3UTR CCA 90 bp CTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGCCCTCGCCCGAGTGGCTGGAATaGATCGGGGGCCTCGGGAAA +
Preference number: 4 (lower is better)
Translates to: LPPLWNPPVPCPAYTRPSPEWLE*IGGLGK
Trigger: TTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG...CGAGGGCCGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CCA 90 bp ACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGCCCTCGCTGTCAGCCCCGAGTaGCTGGAATGGATCGGGGGC +
Preference number: 4 (lower is better)
Translates to: TAPSLEPARALSRLHTALAVSPE*LEWIGG
Trigger: GCCCCCGATCCATTCCAGCCACTCGGGGCTGACAGC...GAGGGCCGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CCA 90 bp CCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGCCCTCGCCTAGGCCGAGTCCCGGTCCTTaGAGTACGGTGGCGACGGTG +
Preference number: 4 (lower is better)
Translates to: PLWNPPVPCPAYTRPSPRPSPGP*STVATV
Trigger: CACCGTCGCCACCGTACTCCAAGGACCGGGACTCGG...CCTAGGCGAGGGCCGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602022.5
CDS-3UTR TCA 90 bp GCTGTGCTTGGGGGACAGGCTCCCTGTGCTGTTGAGGCTGCTGACGCTGCCGTGGCTGGGAGAGGGGGATaGGCGGCGCCGCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: AVLGGQAPCAVEAADAAVAGRGG*AAPPSS
Trigger: GGAAGATGGCGGCGCCGCTCATCCCCCTCTCCCAGC...CACGGCAGCGTCAGCAGCCTCAACAGCACAGGGAGCCTGTCCCCCAAGCACAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000593760.5
CDS-3UTR TCA 90 bp GCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCGGAGCCGAGAGAGCCTaGACTGTCCGGGCCGGGCGT +
Preference number: 4 (lower is better)
Translates to: APSGWNGSGASGKSAEPSGAERA*TVRAGR
Trigger: ACGCCCGGCCCGGACAGTTCAGGCTCTCTCGGCTCC...GCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp CCCGTGCCCTGTCCCGCCTACACACGGCCCTCGCCTAGGCGGCAGGCATGTCAGAGCCCAGTGGGCCTCTaGAGAGGGCGGTGTGACCAT +
Preference number: 4 (lower is better)
Translates to: PVPCPAYTRPSPRRQACQSPVGL*RGRCDH
Trigger: ATGGTCACACCGCCCTCTGCAGAGGCCCACTGGGCT...CTGACATGCCTGCCGCCTAGGCGAGGGCCGTGTGTAGGCGGGACAGGGCACGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602022.5
CDS-3UTR CCA 90 bp CAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGCCACGCGTGCGCACTaGGACGACGGGAGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: QKSQGSCKRKGVGWPGGGATRAH*DDGRAV
Trigger: CACCGCCCTCCCGTCGTCCCAGTGCGCACGCGTGGC...TCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000248070.10
CDS-3UTR CCA 90 bp TCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAGCCACGCGTGCGCACTaGGACGACGGGAGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: SAPSGWNGSGASGKSAEPATRAH*DDGRAV
Trigger: CACCGCCCTCCCGTCGTCCCAGTGCGCACGCGTGGC...TGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594975.5
CDS-3UTR CCA 90 bp GCTGTGCTTGGGGGACAGGCTCCCTGTGCTGTTGAGGCTGCTGACGCTGCCGTGCTGCTGACGCTGCCGTaGGACGGCGTGGAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: AVLGGQAPCAVEAADAAVLLTLP*DGVERR
Trigger: CCTCCGCTCCACGCCGTCCCACGGCAGCGTCAGCAG...CACGGCAGCGTCAGCAGCCTCAACAGCACAGGGAGCCTGTCCCCCAAGCACAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000593760.5
CDS-3UTR TCA 90 bp CGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGCGCTGGGAGAGGGGGATaGGCGGCGCCGCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: RVAGMDRGPRESLRNQAGAGRGG*AAPPSS
Trigger: GGAAGATGGCGGCGCCGCTCATCCCCCTCTCCCAGC...GCCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR TCA 90 bp CACCCTGCCTCGGTCAGAAGTGGGATCTGCTGCGCCGCCAGGGCACGCACACACGCTCCACCAGCTGAGTaGACACGGGGCAGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: HPASVRSGICCAARARTHAPPAE*TRGSQG
Trigger: CCCTTGGCTGCCCCGTGTTCACTCAGCTGGTGGAGC...GTGTGTGCGTGCCCTGGCGGCGCAGCAGATCCCACTTCTGACCGAGGCAGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR GCA 90 bp CCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGGCTGCAGCCACGCGTaGGCACTGGGACGACGGGAG +
Preference number: 4 (lower is better)
Translates to: PEWLEWIGGLGKVCGTKLGCSHA*ALGRRE
Trigger: CTCCCGTCGTCCCAGTGCGCACGCGTGGCTGCAGCC...CAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594975.5
CDS-3UTR GCA 90 bp CCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGTGTCCGGGCCGGGCGTaGCTCTCTCCGAAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: PSGWNGSGASGKSAEPSWCPGRA*LSPKAG
Trigger: TCCCGCCTTCGGAGAGAGGCACGCCCGGCCCGGACA...CCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp CAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAATGTCCGGGCCGGGCGTaGCTCTCTCCGAAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: QPRVAGMDRGPRESLRNQCPGRA*LSPKAG
Trigger: TCCCGCCTTCGGAGAGAGGCACGCCCGGCCCGGACA...TTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp ACACGGGGCAGCCAAGGGAGACTGCCCAGTCACACTGGCACCTGGGGCACCTGGAAGACAGAGCCCATCTaGCCCTGCCTGGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TRGSQGRLPSHTGTWGTWKTEPI*PCLGAA
Trigger: GGCAGCCCCCAGGCAGGGGCAGATGGGCTCTGTCTT...CCAGGTGCCCCAGGTGCCAGTGTGACTGGGCAGTCTCCCTTGGCTGCCCCGTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CCA 90 bp AGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGCTGCTGACGCTGCCGTaGGACGGCGTGGAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: SLLTLNKPPSPGPWSTVALLTLP*DGVERR
Trigger: CCTCCGCTCCACGCCGTCCCACGGCAGCGTCAGCAG...CGCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp GAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGACTCAACTTACCTGCTGACGCTGCCGTaGGACGGCGTGGAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: EAASGREWGGPEAEDSTYLLTLP*DGVERR
Trigger: CCTCCGCTCCACGCCGTCCCACGGCAGCGTCAGCAG...GTAAGTTGAGTCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp CGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGCCTGCTGACGCTGCCGTaGGACGGCGTGGAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: RVAGMDRGPRESLRNQAGLLTLP*DGVERR
Trigger: CCTCCGCTCCACGCCGTCCCACGGCAGCGTCAGCAG...GCCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp GGGGGCCAGACACAAGAGACAGATGAGCTCGCCAGCAGTGCCTTCCCAGCAGCCCTGCTGACGCTGCCGTaGGACGGCGTGGAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: GGQTQETDELASSAFPAALLTLP*DGVERR
Trigger: CCTCCGCTCCACGCCGTCCCACGGCAGCGTCAGCAG...GGCTGCTGGGAAGGCACTGCTGGCGAGCTCATCTGTCTCTTGTGTCTGGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp CTTGGGGGACAGGCTCCCTGTGCTGTTGAGGCTGCTGACGCTGCCGTGGGACGGTCAGCCCCGAGTGGCTaGAATGGATCGGGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LGGQAPCAVEAADAAVGRSAPSG*NGSGAS
Trigger: CGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGA...CCGTCCCACGGCAGCGTCAGCAGCCTCAACAGCACAGGGAGCCTGTCCCCCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CCA 90 bp CACACCCTGCCTCGGTCAGAAGTGGGATCTGCTGCGCCGCCAGGGCACGCACACAGGGGGCCTCATGCCTaGGGCACGCGTCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: HTLPRSEVGSAAPPGHAHRGPHA*GTRLPG
Trigger: ACCTGGAAGACGCGTGCCCCAGGCATGAGGCCCCCT...GTGTGCGTGCCCTGGCGGCGCAGCAGATCCCACTTCTGACCGAGGCAGGGTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR CAA 72 bp CTGCCCCTCTCTGCCAGGGAGACGCCTTCGCTCAGGTaGGCCAGGTCGGTCAGGCTGGCACCATGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LPLSARETPSLR*ARSVRLAPWAP
Trigger: TGGAGCCCATGGTGCCAGCCTGACCGACCTGGCCAACCTGAGCGAAGGCGTCTCCCTGGCAGAGAGGGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR TCA 90 bp GAGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGGCTGGGAGAGGGGGATaGGCGGCGCCGCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: ETKIPGKLQAEGSGVARRAGRGG*AAPPSS
Trigger: GGAAGATGGCGGCGCCGCTCATCCCCCTCTCCCAGC...CCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp GAGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGGGAGCCGAGAGAGCCTaGACTGTCCGGGCCGGGCGT +
Preference number: 4 (lower is better)
Translates to: ETKIPGKLQAEGSGVARRGAERA*TVRAGR
Trigger: ACGCCCGGCCCGGACAGTTCAGGCTCTCTCGGCTCC...CCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp TTCCAGGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTGGAGCCGAGAGAGCCTaGACTGTCCGGGCCGGGCGT +
Preference number: 4 (lower is better)
Translates to: FQVLQPSLLTLNKPPSPGGAERA*TVRAGR
Trigger: ACGCCCGGCCCGGACAGTTCAGGCTCTCTCGGCTCC...ACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGACCTGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp AGCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAGGAGCCGAGAGAGCCTaGACTGTCCGGGCCGGGCGT +
Preference number: 4 (lower is better)
Translates to: SPGCFLSSTDRCVFVPRGGAERA*TVRAGR
Trigger: ACGCCCGGCCCGGACAGTTCAGGCTCTCTCGGCTCC...TCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp CGGGGAAGCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCCGAGTCTGCTCACCCTaGACAAGCCCCCGAGTCCCG +
Preference number: 4 (lower is better)
Translates to: RGSPGCFLSSTDRCVFVPRVCSP*TSPRVP
Trigger: CGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCG...GGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGCTTCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR TCA 90 bp GTGCATACACCACTGGGGGAGTGTCTGACTGATGCGTGGGAGGGCGGGTGGGGAGGGGGAGTGTCTGACTaGTGCGTGGGAGGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: VHTPLGECLTDAWEGGWGGGVSD*CVGGRV
Trigger: CACCCGCCCTCCCACGCATCAGTCAGACACTCCCCC...TCCCCACCCGCCCTCCCACGCATCAGTCAGACACTCCCCCAGTGGTGTATGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR TCA 90 bp AGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGGGGGGAGTGTCTGACTaGTGCGTGGGAGGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: SLLTLNKPPSPGPWSTVAGGVSD*CVGGRV
Trigger: CACCCGCCCTCCCACGCATCAGTCAGACACTCCCCC...CGCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR TCA 90 bp GAACACGGGGCAGCCAAGGGAGACTGCCCAGTCACACTGGCACCTGGGGCACCTAACGACCAGGACGCCTaGGGGACTGCTGCCACCGTG +
Preference number: 4 (lower is better)
Translates to: EHGAAKGDCPVTLAPGAPNDQDA*GTAATV
Trigger: CACGGTGGCAGCAGTCCCTCAGGCGTCCTGGTCGTT...AGGTGCCCCAGGTGCCAGTGTGACTGGGCAGTCTCCCTTGGCTGCCCCGTGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR GCA 90 bp GAGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGTGTCCGGGCCGGGCGTaGCTCTCTCCGAAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: ETKIPGKLQAEGSGVARRCPGRA*LSPKAG
Trigger: TCCCGCCTTCGGAGAGAGGCACGCCCGGCCCGGACA...CCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp GTGCATACACCACTGGGGGAGTGTCTGACTGATGCGTGGGAGGGCGGGTGGGGAAGTTCCAGGTCCTCCTaGTCCTGCCGCCGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: VHTPLGECLTDAWEGGWGSSRSS*SCRRSR
Trigger: GCGGCTGCGGCGGCAGGAGCAGGAGGACCTGGAACT...TCCCCACCCGCCCTCCCACGCATCAGTCAGACACTCCCCCAGTGGTGTATGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CCA 90 bp GCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCCGCCTTCGCTCAGGTTaGCCAGGTCGGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: APSGWNGSGASGKSAEPSRLRSG*PGRSGW
Trigger: CCAGCCTGACCGACCTGGCCAACCTGAGCGAAGGCG...GCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp GGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGACTCAACTTTCAGCCCCGAGTGGCTaGAATGGATCGGGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: GKLQAEGSGVARRRRTQLSAPSG*NGSGAS
Trigger: CGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGA...AAGTTGAGTCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp CGGGGAAGCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCTCAGCCCCGAGTGGCTaGAATGGATCGGGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: RGSPGCFLSSTDRCVFVPSAPSG*NGSGAS
Trigger: CGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGA...GGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGCTTCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CCA 90 bp ACATCTGCACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACAGCTGTCAGCCCCGAGTaGCTGGAATGGATCGGGGGC +
Preference number: 4 (lower is better)
Translates to: TSALPPLWNPPVPCPAYTAVSPE*LEWIGG
Trigger: GCCCCCGATCCATTCCAGCCACTCGGGGCTGACAGC...TGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGCAGATGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CCA 90 bp GAGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAAGGGAGTGGGGTaGCCCGGAGGCGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: ETKIPGKLQAEGSGVARRRKGVG*PGGGGL
Trigger: GAGTCCTCCGCCTCCGGGCCACCCCACTCCCTTCCG...CCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp GTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGGCACTGCCCCCTCTCTaGAACCCGCCCGTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: VLQPSLLTLNKPPSPGPWALPPL*NPPVPC
Trigger: ACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGC...CCAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CCA 90 bp GGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGCACTGCCCCCTCTCTaGAACCCGCCCGTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: GLAAESAHPEQAPESRSLALPPL*NPPVPC
Trigger: ACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGC...CAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CCA 90 bp ACATCTGCACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACCGAGTCCCGGTCCTTaGAGTACGGTGGCGACGGTG +
Preference number: 4 (lower is better)
Translates to: TSALPPLWNPPVPCPAYTPSPGP*STVATV
Trigger: CACCGTCGCCACCGTACTCCAAGGACCGGGACTCGG...TGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGCAGATGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CCA 90 bp GCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCGAGGCGGGGAAGCCCTaGGTGCTTCCTCTCCTCGAC +
Preference number: 4 (lower is better)
Translates to: APSGWNGSGASGKSAEPSEAGKP*VLPLLD
Trigger: GTCGAGGAGAGGAAGCACCCAGGGCTTCCCCGCCTC...GCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602022.5
CDS-3UTR TCA 90 bp TCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCACTGCAGAGGGCGGTGTaGCCATCAGAGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SAPSGWNGSGASGKSAEPLQRAV*PSEGCW
Trigger: CCAGCAGCCCTCTGATGGTCACACCGCCCTCTGCAG...TGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR TCA 90 bp CCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTCTGCAGAGGGCGGTGTaGCCATCAGAGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PRVAGMDRGPRESLRNQALQRAV*PSEGCW
Trigger: CCAGCAGCCCTCTGATGGTCACACCGCCCTCTGCAG...AGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR TCA 90 bp CCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGCGAGTCTGCTCACCCTaGACAAGCCCCCGAGTCCCG +
Preference number: 4 (lower is better)
Translates to: PSGWNGSGASGKSAEPSWRVCSP*TSPRVP
Trigger: CGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCG...CCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000602022.5
CDS-3UTR TCA 90 bp TTTCCAGGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGGGGGGAGTGTCTGACTaGTGCGTGGGAGGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: FPGLAAESAHPEQAPESRGGVSD*CVGGRV
Trigger: CACCCGCCCTCCCACGCATCAGTCAGACACTCCCCC...CCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGACCTGGAAA
66% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR TCA 90 bp ACACGGGGCAGCCAAGGGAGACTGCCCAGTCACACTGGCACCTGGGGCACCTGGTGCAGGTGGAACTCGTaGGGAAAGCAGGCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: TRGSQGRLPSHTGTWGTWCRWNS*GKQAPA
Trigger: TGCAGGGGCCTGCTTTCCTCACGAGTTCCACCTGCA...CCAGGTGCCCCAGGTGCCAGTGTGACTGGGCAGTCTCCCTTGGCTGCCCCGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR GCA 90 bp ACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGCCCTCTTCATGGCCACTCTGTaGACAGGCCACCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: TAPSLEPARALSRLHTALFMATL*TGHQSQ
Trigger: CTGAGACTGGTGGCCTGTGCACAGAGTGGCCATGAA...GAGGGCCGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp GCACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGCCCTCCTGGCGGCTTTCATaGAGCTGGGAAAGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: ALPPLWNPPVPCPAYTRPSWRLS*SWESLL
Trigger: GAGCAAACTTTCCCAGCTGCATGAAAGCCGCCAGGA...GGGCCGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp GGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAGAGCGGAGTTCCAGGTCCTCCTaGTCCTGCCGCCGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GASSPRLTAVCSSPEEERSSRSS*SCRRSR
Trigger: GCGGCTGCGGCGGCAGGAGCAGGAGGACCTGGAACT...CCGCTCTTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR GCA 90 bp CACCAAGGAAACATCCAGACATGCGCGGCCCGGCCCATCCGCTCCCGGAACAGCCCCCAGGTTCGAGGCTaGAGGGGCAGACTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: HQGNIQTCAARPIRSRNSPQVRG*RGRLWC
Trigger: ACACCAGAGTCTGCCCCTGCAGCCTCGAACCTGGGG...GCTGTTCCGGGAGCGGATGGGCCGGGCCGCGCATGTCTGGATGTTTCCTTGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp CACCCTGCCTCGGTCAGAAGTGGGATCTGCTGCGCCGCCAGGGCACGCACACACGCAGCCAAGGGAGACTaGCCAGTCACACTGGCACCT +
Preference number: 4 (lower is better)
Translates to: HPASVRSGICCAARARTHAAKGD*PVTLAP
Trigger: AGGTGCCAGTGTGACTGGGCAGTCTCCCTTGGCTGC...GTGTGTGCGTGCCCTGGCGGCGCAGCAGATCCCACTTCTGACCGAGGCAGGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CCA 90 bp CACCAAGGAAACATCCAGACATGCGCGGCCCGGCCCATCCGCTCCCGGAACAGCTGCCGTGGGACGGCGTaGAGCGGAGGCTGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: HQGNIQTCAARPIRSRNSCRGTA*SGGCLL
Trigger: CAAAAGACAGCCTCCGCTCCACGCCGTCCCACGGCA...GCTGTTCCGGGAGCGGATGGGCCGGGCCGCGCATGTCTGGATGTTTCCTTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp GCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCCCGAGGCACTGCTGACGCTGCCGTaGGACGGCGTGGAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: ARRRRTQLTEVKSAKPEALLTLP*DGVERR
Trigger: CCTCCGCTCCACGCCGTCCCACGGCAGCGTCAGCAG...TGCCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp GGCCATGAACAGATCTGGCGGGTGGGATGTTCTGCTGTCACACCAGGGGACCAGCTGCTGACGCTGCCGTaGGACGGCGTGGAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: GHEQIWRVGCSAVTPGDQLLTLP*DGVERR
Trigger: CCTCCGCTCCACGCCGTCCCACGGCAGCGTCAGCAG...CTGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp CCTGTCCCGCCTACACACGGCCCTCGCCTAGGCGGCAGGCATGTCAGCCTTGCTAGCTTGGCCTTCTGCTaGTCCATCTCGTCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: PVPPTHGPRLGGRHVSLASLAFC*SISSRR
Trigger: CCGCCTGGACGAGATGGACCAGCAGAAGGCCAAGCT...AGCAAGGCTGACATGCCTGCCGCCTAGGCGAGGGCCGTGTGTAGGCGGGACAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602022.5
CDS-3UTR CCA 90 bp AAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGATGCTCCAGGCTCCTGTaGGCCTCCTGGCGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: KSQGSCKRKGVGWPGGGGCSRLL*ASWRLS
Trigger: TGAAAGCCGCCAGGAGGCCCACAGGAGCCTGGAGCA...TCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp ACACACCCTGCCTCGGTCAGAAGTGGGATCTGCTGCGCCGCCAGGGCACGCACATGCTCCAGGCTCCTGTaGGCCTCCTGGCGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: THPASVRSGICCAARARTCSRLL*ASWRLS
Trigger: TGAAAGCCGCCAGGAGGCCCACAGGAGCCTGGAGCA...TGTGCGTGCCCTGGCGGCGCAGCAGATCCCACTTCTGACCGAGGCAGGGTGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CCA 90 bp GTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCGTCAGGCTGGCACCATaGGCTCCATCGAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: VSPEWLEWIGGLGKVCGTVRLAP*APSSTW
Trigger: CCAGGTGCTCGATGGAGCCCATGGTGCCAGCCTGAC...GGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp GCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGACTCAACTTACAGAGGTCGCCTTCGCTCAGGTTaGCCAGGTCGGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ASGREWGGPEAEDSTYRGRLRSG*PGRSGW
Trigger: CCAGCCTGACCGACCTGGCCAACCTGAGCGAAGGCG...ACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp CAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAACGCCTTCGCTCAGGTTaGCCAGGTCGGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: QPRVAGMDRGPRESLRNQRLRSG*PGRSGW
Trigger: CCAGCCTGACCGACCTGGCCAACCTGAGCGAAGGCG...TTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp CGGGGAAGCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCCCCGAGTGGCTGGAATaGATCGGGGGCCTCGGGAAA +
Preference number: 4 (lower is better)
Translates to: RGSPGCFLSSTDRCVFVPPEWLE*IGGLGK
Trigger: TTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG...GGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGCTTCCCCG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CCA 90 bp GCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCCCCGAGTGGCTGGAATaGATCGGGGGCCTCGGGAAA +
Preference number: 4 (lower is better)
Translates to: APSGWNGSGASGKSAEPSPEWLE*IGGLGK
Trigger: TTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG...GCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp CAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGATCAGCCCCGAGTGGCTaGAATGGATCGGGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: QKSQGSCKRKGVGWPGGGSAPSG*NGSGAS
Trigger: CGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGA...TCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp CAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAATCAGCCCCGAGTGGCTaGAATGGATCGGGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: QPRVAGMDRGPRESLRNQSAPSG*NGSGAS
Trigger: CGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGA...TTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp CAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGCTGTCAGCCCCGAGTaGCTGGAATGGATCGGGGGC +
Preference number: 4 (lower is better)
Translates to: QKSQGSCKRKGVGWPGGGAVSPE*LEWIGG
Trigger: GCCCCCGATCCATTCCAGCCACTCGGGGCTGACAGC...TCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp GAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGACTCAACTTACGCTGTCAGCCCCGAGTaGCTGGAATGGATCGGGGGC +
Preference number: 4 (lower is better)
Translates to: EAASGREWGGPEAEDSTYAVSPE*LEWIGG
Trigger: GCCCCCGATCCATTCCAGCCACTCGGGGCTGACAGC...GTAAGTTGAGTCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp TCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAGCTGTCAGCCCCGAGTaGCTGGAATGGATCGGGGGC +
Preference number: 4 (lower is better)
Translates to: SAPSGWNGSGASGKSAEPAVSPE*LEWIGG
Trigger: GCCCCCGATCCATTCCAGCCACTCGGGGCTGACAGC...TGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp CAGGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTCTCGCTCTCCCGCTTaGCCCACGCCAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: QVLQPSLLTLNKPPSPGPSRSPA*PTPAAA
Trigger: AGCAGCAGCTGGCGTGGGCCAAGCGGGAGAGCGAGA...AGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CCA 90 bp TCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAGAGCGGGAGGCAGTCAGCCCGAGGCGGGGAAGCCCTaGGTGCTTCCTCTCCTCGAC +
Preference number: 4 (lower is better)
Translates to: STDRCVFVPRGRAGGSQPEAGKP*VLPLLD
Trigger: GTCGAGGAGAGGAAGCACCCAGGGCTTCCCCGCCTC...GGGCTGACTGCCTCCCGCTCTTCCTCTGGGGACGAACACACAGCGGTCAGTCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CCA 90 bp CACACCCTGCCTCGGTCAGAAGTGGGATCTGCTGCGCCGCCAGGGCACGCACACTGTCCAACTCTGTCCTaGCCCGGCACCGCCAATAGG +
Preference number: 4 (lower is better)
Translates to: HTLPRSEVGSAAPPGHAHCPTLS*PGTANR
Trigger: CCTATTGGCGGTGCCGGGCCAGGACAGAGTTGGACA...GTGTGCGTGCCCTGGCGGCGCAGCAGATCCCACTTCTGACCGAGGCAGGGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR TCA 90 bp AGGCGGGGAAGCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCTGGACTCGCCCAGCCTaGATGCTCTGCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RRGSPGCFLSSTDRCVFVWTRPA*MLCSSW
Trigger: CCAGCTGGAGCAGAGCATTCAGGCTGGGCGAGTCCA...GACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGCTTCCCCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp TCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCATGGACTCGCCCAGCCTaGATGCTCTGCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SAPSGWNGSGASGKSAEPWTRPA*MLCSSW
Trigger: CCAGCTGGAGCAGAGCATTCAGGCTGGGCGAGTCCA...TGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR TCA 90 bp GGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAGAGCGGCGAGTCTGCTCACCCTaGACAAGCCCCCGAGTCCCG +
Preference number: 4 (lower is better)
Translates to: GASSPRLTAVCSSPEEERRVCSP*TSPRVP
Trigger: CGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCG...CCGCTCTTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR TCA 90 bp ACATCTGCACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACAGGATGTCTGCAGCTATaGGTAGGGAGGAGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: TSALPPLWNPPVPCPAYTGCLQL*VGRRRG
Trigger: TCCCCGCCTCCTCCCTACTCATAGCTGCAGACATCC...TGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGCAGATGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR GCA 90 bp CAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAAGCCCAGTGGGCCTCTaGAGAGGGCGGTGTGACCAT +
Preference number: 4 (lower is better)
Translates to: QKSQGSCKRKGVGWPGGGSPVGL*RGRCDH
Trigger: ATGGTCACACCGCCCTCTGCAGAGGCCCACTGGGCT...TCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp CCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGAGCCCAGTGGGCCTCTaGAGAGGGCGGTGTGACCAT +
Preference number: 4 (lower is better)
Translates to: PSGWNGSGASGKSAEPSWSPVGL*RGRCDH
Trigger: ATGGTCACACCGCCCTCTGCAGAGGCCCACTGGGCT...CCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp CCCGTGCCCTGTCCCGCCTACACACGGCCCTCGCCTAGGCGGCAGGCATGTCAGACTGTTGGCTGTGTTTaGTTGAGGCTGTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: PVPCPAYTRPSPRRQACQTVGCV*LRLCLG
Trigger: CCCCAAGCACAGCCTCAAGCAAACACAGCCAACAGT...CTGACATGCCTGCCGCCTAGGCGAGGGCCGTGTGTAGGCGGGACAGGGCACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602022.5
CDS-3UTR GCA 90 bp AGGCTCCCTGTGCTGTTGAGGCTGCTGACGCTGCCGTGGGACGGCGTGGAGCGGTGGGTTTCCTCCTGCTaGAATCGGTTCAGCTCCGAC +
Preference number: 4 (lower is better)
Translates to: RLPVLLRLLTLPWDGVERWVSSC*NRFSSD
Trigger: GTCGGAGCTGAACCGATTGCAGCAGGAGGAAACCCA...CCGCTCCACGCCGTCCCACGGCAGCGTCAGCAGCCTCAACAGCACAGGGAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR GCA 90 bp CACCCTGCCTCGGTCAGAAGTGGGATCTGCTGCGCCGCCAGGGCACGCACACACCCATGGCTCCAAAACTaGCCCTCTCTGCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: HPASVRSGICCAARARTHPWLQN*PSLPGR
Trigger: TCTCCCTGGCAGAGAGGGGCAGTTTTGGAGCCATGG...GTGTGTGCGTGCCCTGGCGGCGCAGCAGATCCCACTTCTGACCGAGGCAGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR GCA 90 bp ATCTGCACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGCCATGGCTCCAAAACTaGCCCTCTCTGCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: ICTAPSLEPARALSRLHTPWLQN*PSLPGR
Trigger: TCTCCCTGGCAGAGAGGGGCAGTTTTGGAGCCATGG...CGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGCAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp GAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCCGGGGAAGCCCTGGGTaGTTCCTCTCCTCGACTGAC +
Preference number: 4 (lower is better)
Translates to: ESAHPEQAPESRSLEYGGRGSPG*FLSSTD
Trigger: GTCAGTCGAGGAGAGGAAGCACCCAGGGCTTCCCCG...GCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR GCA 90 bp ACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGACGGTGTGTCGGGGAAGCCCTGGGTaGTTCCTCTCCTCGACTGAC +
Preference number: 4 (lower is better)
Translates to: TLNKPPSPGPWSTVATVCRGSPG*FLSSTD
Trigger: GTCAGTCGAGGAGAGGAAGCACCCAGGGCTTCCCCG...ACACACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR GCA 90 bp CACACCCTGCCTCGGTCAGAAGTGGGATCTGCTGCGCCGCCAGGGCACGCACACTCTGCTTGTGGCTACTaGCTCTTCCCGCAGCGTGGA +
Preference number: 4 (lower is better)
Translates to: HTLPRSEVGSAAPPGHAHSACGY*LFPQRG
Trigger: TCCACGCTGCGGGAAGAGGCAGTAGCCACAAGCAGA...GTGTGCGTGCCCTGGCGGCGCAGCAGATCCCACTTCTGACCGAGGCAGGGTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CCA 90 bp TGTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACTGCCGTGGGACGGCGTaGAGCGGAGGCTGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: CQPRVAGMDRGPRESLRNCRGTA*SGGCLL
Trigger: CAAAAGACAGCCTCCGCTCCACGCCGTCCCACGGCA...GTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp CCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATCTGCTGACGCTGCCGTaGGACGGCGTGGAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: PPSPGPWSTVATVCVCIYLLTLP*DGVERR
Trigger: CCTCCGCTCCACGCCGTCCCACGGCAGCGTCAGCAG...ATATATACACACACACACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp CCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGCTCCTGTGGGCCTCCTaGCGGCTTTCATGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PEWLEWIGGLGKVCGTKLLLWAS*RLSCSW
Trigger: CCAGCTGCATGAAAGCCGCCAGGAGGCCCACAGGAG...CAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp ACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGACGGTGTGTTGCTCCAGGCTCCTGTaGGCCTCCTGGCGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: TLNKPPSPGPWSTVATVCCSRLL*ASWRLS
Trigger: TGAAAGCCGCCAGGAGGCCCACAGGAGCCTGGAGCA...ACACACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp CGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGCTGCTCCAGGCTCCTGTaGGCCTCCTGGCGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: RVAGMDRGPRESLRNQAGCSRLL*ASWRLS
Trigger: TGAAAGCCGCCAGGAGGCCCACAGGAGCCTGGAGCA...GCCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp AGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGTGCTCCAGGCTCCTGTaGGCCTCCTGGCGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: SPEWLEWIGGLGKVCGTKCSRLL*ASWRLS
Trigger: TGAAAGCCGCCAGGAGGCCCACAGGAGCCTGGAGCA...CTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp CACCCTGCCTCGGTCAGAAGTGGGATCTGCTGCGCCGCCAGGGCACGCACACACGCTCCATCGAGCACCTaGTCATACTGCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: HPASVRSGICCAARARTHAPSST*SYCSRL
Trigger: GAGCCTGGAGCAGTATGACCAGGTGCTCGATGGAGC...GTGTGTGCGTGCCCTGGCGGCGCAGCAGATCCCACTTCTGACCGAGGCAGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CCA 90 bp CAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGTCAGGCTGGCACCATaGGCTCCATCGAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: QKSQGSCKRKGVGWPGGGVRLAP*APSSTW
Trigger: CCAGGTGCTCGATGGAGCCCATGGTGCCAGCCTGAC...TCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp CCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGTCAGGCTGGCACCATaGGCTCCATCGAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: PEWLEWIGGLGKVCGTKLVRLAP*APSSTW
Trigger: CCAGGTGCTCGATGGAGCCCATGGTGCCAGCCTGAC...CAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp CGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGCGTCAGGCTGGCACCATaGGCTCCATCGAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: RVAGMDRGPRESLRNQAGVRLAP*APSSTW
Trigger: CCAGGTGCTCGATGGAGCCCATGGTGCCAGCCTGAC...GCCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp TCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCACCAGGTCGGTCAGGCTaGCACCATGGGCTCCATCGA +
Preference number: 4 (lower is better)
Translates to: SAPSGWNGSGASGKSAEPPGRSG*HHGLHR
Trigger: TCGATGGAGCCCATGGTGCCAGCCTGACCGACCTGG...TGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp CCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTCCAGGTCGGTCAGGCTaGCACCATGGGCTCCATCGA +
Preference number: 4 (lower is better)
Translates to: PRVAGMDRGPRESLRNQAPGRSG*HHGLHR
Trigger: TCGATGGAGCCCATGGTGCCAGCCTGACCGACCTGG...AGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp AGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCCCGAGTGGCTGGAATaGATCGGGGGCCTCGGGAAA +
Preference number: 4 (lower is better)
Translates to: SPEWLEWIGGLGKVCGTKPEWLE*IGGLGK
Trigger: TTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG...CTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp CATACACCACTGGGGGAGTGTCTGACTGATGCGTGGGAGGGCGGGTGGGGATGTTCAGCCCCGAGTGGCTaGAATGGATCGGGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: HTPLGECLTDAWEGGWGCSAPSG*NGSGAS
Trigger: CGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGA...ACATCCCCACCCGCCCTCCCACGCATCAGTCAGACACTCCCCCAGTGGTGTATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CCA 90 bp TTCCAGGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTTCTCGCTCTCCCGCTTaGCCCACGCCAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: FQVLQPSLLTLNKPPSPGSRSPA*PTPAAA
Trigger: AGCAGCAGCTGGCGTGGGCCAAGCGGGAGAGCGAGA...ACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGACCTGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CCA 90 bp ACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTACCGAGTCCCGGTCCTTaGAGTACGGTGGCGACGGTG +
Preference number: 4 (lower is better)
Translates to: TSPRVPVLGVRWRRCVCVPSPGP*STVATV
Trigger: CACCGTCGCCACCGTACTCCAAGGACCGGGACTCGG...TACACACACACACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CCA 90 bp ACATCTGCACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACATGTCTGACTGATGCGTaGGAGGGCGGGTGGGGATGT +
Preference number: 4 (lower is better)
Translates to: TSALPPLWNPPVPCPAYTCLTDA*EGGWGC
Trigger: ACATCCCCACCCGCCCTCCCACGCATCAGTCAGACA...TGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGCAGATGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CCA 90 bp ACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGCCCTCCCTCATTGCCAAATTTaGAACGGGTCGCCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: TAPSLEPARALSRLHTALPHCQI*NGSPLS
Trigger: TGACAGCGGCGACCCGTTCCAAATTTGGCAATGAGG...GAGGGCCGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594851.5
3UTR CAA 72 bp GCCAGCCTCTCCTGTTCCGCCTTCTCGCTCTCCCGCTaGGCCCACGCCAGCTGCTGCTCCTCATTGCCAAAA +
Preference number: 4 (lower is better)
Translates to: ASLSCSAFSLSR*AHASCCSSLPK
Trigger: TTTTGGCAATGAGGAGCAGCAGCTGGCGTGGGCCAAGCGGGAGAGCGAGAAGGCGGAACAGGAGAGGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602022.5
CDS-3UTR TCA 90 bp AAGCCCGAGGCAGAGGCCTTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATGGGGCTGGGAGAGGGGGATaGGCGGCGCCGCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: KPEAEALEGLAAEEGTNGAGRGG*AAPPSS
Trigger: GGAAGATGGCGGCGCCGCTCATCCCCCTCTCCCAGC...CCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAAGGCCTCTGCCTCGGGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR TCA 90 bp GCACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGCCCATCAAGAGGCAGCTTTaGGTTCATGAGGACTGGCTT +
Preference number: 4 (lower is better)
Translates to: ALPPLWNPPVPCPAYTRPIKRQL*VHEDWL
Trigger: AAGCCAGTCCTCATGAACTCAAAGCTGCCTCTTGAT...GGGCCGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp GCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTCCGGCGAGAGGACTTaGGGAGGGTCGATGCCTTTA +
Preference number: 4 (lower is better)
Translates to: APSGWNGSGASGKSAEPSSGERT*GGSMPL
Trigger: TAAAGGCATCGACCCTCCTCAAGTCCTCTCGCCGGA...GCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR TCA 90 bp TTTTTACTTTGGAACGGGTCGCCGCTGTCAGCCCCGAGTGGCTGGAATGGATCGGGAGCCGAGAGAGCCTaGACTGTCCGGGCCGGGCGT +
Preference number: 4 (lower is better)
Translates to: FLLWNGSPLSAPSGWNGSGAERA*TVRAGR
Trigger: ACGCCCGGCCCGGACAGTTCAGGCTCTCTCGGCTCC...CGATCCATTCCAGCCACTCGGGGCTGACAGCGGCGACCCGTTCCAAAGTAAAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR TCA 90 bp GAGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGTGGACTCGCCCAGCCTaGATGCTCTGCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ETKIPGKLQAEGSGVARRWTRPA*MLCSSW
Trigger: CCAGCTGGAGCAGAGCATTCAGGCTGGGCGAGTCCA...CCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp GTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGGCATGTCAGCCTTGCTaGGCGCGATGGCCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: VLQPSLLTLNKPPSPGPWACQPC*ARWPVP
Trigger: TGGAACTGGCCATCGCGCTCAGCAAGGCTGACATGC...CCAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR TCA 90 bp ACACCACTGGGGGAGTGTCTGACTGATGCGTGGGAGGGCGGGTGGGGATGTCTGGCATGTCAGCCTTGCTaGGCGCGATGGCCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: TPLGECLTDAWEGGWGCLACQPC*ARWPVP
Trigger: TGGAACTGGCCATCGCGCTCAGCAAGGCTGACATGC...CAGACATCCCCACCCGCCCTCCCACGCATCAGTCAGACACTCCCCCAGTGGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR TCA 90 bp GGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGCTTCCTCTCCTCGACTaGCCGCTGTGTGTTCGTCCC +
Preference number: 4 (lower is better)
Translates to: GLAAESAHPEQAPESRSLLPLLD*PLCVRP
Trigger: GGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAG...CAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR TCA 90 bp CAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAACTTCCTCTCCTCGACTaGCCGCTGTGTGTTCGTCCC +
Preference number: 4 (lower is better)
Translates to: QPRVAGMDRGPRESLRNQLPLLD*PLCVRP
Trigger: GGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAG...TTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602022.5
CDS-3UTR TCA 90 bp CCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGATGTCTGCAGCTATaGGTAGGGAGGAGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: PRVAGMDRGPRESLRNQAGCLQL*VGRRRG
Trigger: TCCCCGCCTCCTCCCTACTCATAGCTGCAGACATCC...AGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602022.5
CDS-3UTR GCA 90 bp GCTGTGCTTGGGGGACAGGCTCCCTGTGCTGTTGAGGCTGCTGACGCTGCCGTGGTTTGCTTGAGGCTGTaGTTGGGGGACAGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: AVLGGQAPCAVEAADAAVVCLRL*LGDRLP
Trigger: AGGGAGCCTGTCCCCCAAGCACAGCCTCAAGCAAAC...CACGGCAGCGTCAGCAGCCTCAACAGCACAGGGAGCCTGTCCCCCAAGCACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR GCA 90 bp CACCAAGGAAACATCCAGACATGCGCGGCCCGGCCCATCCGCTCCCGGAACAGCGTTTGCTTGAGGCTGTaGTTGGGGGACAGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: HQGNIQTCAARPIRSRNSVCLRL*LGDRLP
Trigger: AGGGAGCCTGTCCCCCAAGCACAGCCTCAAGCAAAC...GCTGTTCCGGGAGCGGATGGGCCGGGCCGCGCATGTCTGGATGTTTCCTTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCCTTAACTTCCCCGTTTaGCTCGTATCGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VSPEWLEWIGGLGKVCGTLNFPV*LVSARA
Trigger: GGCCCTGGCCGATACGAGGCAAACGGGGAAGTTAAG...GGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp GCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCCTTAACTTCCCCGTTTaGCTCGTATCGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: APSGWNGSGASGKSAEPSLNFPV*LVSARA
Trigger: GGCCCTGGCCGATACGAGGCAAACGGGGAAGTTAAG...GCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp TGTAAGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTGTCCGGGCCGGGCGTaGCTCTCTCCGAAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: CKGFPRRCDLSRSCSRVCCPGRA*LSPKAG
Trigger: TCCCGCCTTCGGAGAGAGGCACGCCCGGCCCGGACA...GCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCTTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp AGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGCGGAGCTTGGCCTTCTaGTGGTCCATCTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: SLLTLNKPPSPGPWSTVARSLAF*WSISSR
Trigger: CCTGGACGAGATGGACCAGCAGAAGGCCAAGCTCCG...CGCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp CCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGCGGAGCTTGGCCTTCTaGTGGTCCATCTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PEWLEWIGGLGKVCGTKLRSLAF*WSISSR
Trigger: CCTGGACGAGATGGACCAGCAGAAGGCCAAGCTCCG...CAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp AGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGACTCAACTTCATCCTGGCACTTCTaGCGGACGTCGCTCAGCATG +
Preference number: 4 (lower is better)
Translates to: REAASGREWGGPEAEDSTSSWHF*RTSLSM
Trigger: CATGCTGAGCGACGTCCGGCAGAAGTGCCAGGATGA...AGTTGAGTCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp GTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCTCATCCTGGCACTTCTaGCGGACGTCGCTCAGCATG +
Preference number: 4 (lower is better)
Translates to: VSPEWLEWIGGLGKVCGTSSWHF*RTSLSM
Trigger: CATGCTGAGCGACGTCCGGCAGAAGTGCCAGGATGA...GGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp ATCTGCACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGAGCTGGGTTTCCTCCTaGTGCAATCGGTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ICTAPSLEPARALSRLHTSWVSS*CNRFSS
Trigger: GGAGCTGAACCGATTGCAGCAGGAGGAAACCCAGCT...CGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGCAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp GTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCCTCGCCCAGCCTGAATaGTCTGCTCCAGCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: VSPEWLEWIGGLGKVCGTLAQPE*SAPAGF
Trigger: AAACCCAGCTGGAGCAGAGCATTCAGGCTGGGCGAG...GGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp AGGCTCCCTGTGCTGTTGAGGCTGCTGACGCTGCCGTGGGACGGCGTGGAGCGGTCCTGGCGGCTTTCATaGAGCTGGGAAAGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: RLPVLLRLLTLPWDGVERSWRLS*SWESLL
Trigger: GAGCAAACTTTCCCAGCTGCATGAAAGCCGCCAGGA...CCGCTCCACGCCGTCCCACGGCAGCGTCAGCAGCCTCAACAGCACAGGGAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR GCA 90 bp AAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGAAAAACTGCCCCTCTCTaGCAGGGAGACGCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: KSQGSCKRKGVGWPGGGGKTAPL*QGDAFA
Trigger: AGCGAAGGCGTCTCCCTGGCAGAGAGGGGCAGTTTT...TCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp ACATCTGCACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACAAAAACTGCCCCTCTCTaGCAGGGAGACGCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: TSALPPLWNPPVPCPAYTKTAPL*QGDAFA
Trigger: AGCGAAGGCGTCTCCCTGGCAGAGAGGGGCAGTTTT...TGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGCAGATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp ACATCTGCACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACCATGGCTCCAAAACTaGCCCTCTCTGCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: TSALPPLWNPPVPCPAYTPWLQN*PSLPGR
Trigger: TCTCCCTGGCAGAGAGGGGCAGTTTTGGAGCCATGG...TGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGCAGATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp GAGGCTGTGCTTGGGGGACAGGCTCCCTGTGCTGTTGAGGCTGCTGACGCTGCCCCATGGCTCCAAAACTaGCCCTCTCTGCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: EAVLGGQAPCAVEAADAAPWLQN*PSLPGR
Trigger: TCTCCCTGGCAGAGAGGGGCAGTTTTGGAGCCATGG...GGCAGCGTCAGCAGCCTCAACAGCACAGGGAGCCTGTCCCCCAAGCACAGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR GCA 90 bp AAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGAAAATCCCAGGGAAGCTaGAAGCGGAAGGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: KSQGSCKRKGVGWPGGGGKSQGS*KRKGVG
Trigger: CCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTT...TCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp TTTCCAGGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGCGGGGAAGCCCTGGGTaGTTCCTCTCCTCGACTGAC +
Preference number: 4 (lower is better)
Translates to: FPGLAAESAHPEQAPESRRGSPG*FLSSTD
Trigger: GTCAGTCGAGGAGAGGAAGCACCCAGGGCTTCCCCG...CCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGACCTGGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR GCA 90 bp GGGGGCCAGACACAAGAGACAGATGAGCTCGCCAGCAGTGCCTTCCCAGCAGCCGCGGGTGGGATGTTCTaGTGTCACACCAGGGGACCA +
Preference number: 4 (lower is better)
Translates to: GGQTQETDELASSAFPAAAGGMF*CHTRGP
Trigger: TGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGC...GGCTGCTGGGAAGGCACTGCTGGCGAGCTCATCTGTCTCTTGTGTCTGGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp AACAGATCTGGCGGGTGGGATGTTCTGCTGTCACACCAGGGGACCAGAGCCCCAGGAAACATCCAGACATaGGCGGCCCGGCCCATCCGC +
Preference number: 4 (lower is better)
Translates to: NRSGGWDVLLSHQGTRAPGNIQT*AARPIR
Trigger: GCGGATGGGCCGGGCCGCGCATGTCTGGATGTTTCC...TGGGGCTCTGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGCCAGATCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp AGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCCCAGTGGGAATCTGCTaGGAGAGGGGGATGAGCGGC +
Preference number: 4 (lower is better)
Translates to: RQKSQGSCKRKGVGWPGGPVGIC*ERGMSG
Trigger: GCCGCTCATCCCCCTCTCCCAGCAGATTCCCACTGG...GCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp GCACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGCCCGAACCCTTTACCTTCTaGATCGGCCAAGTCCCATAT +
Preference number: 4 (lower is better)
Translates to: ALPPLWNPPVPCPAYTRPEPFTF*IGQVPY
Trigger: ATATGGGACTTGGCCGATCCAGAAGGTAAAGGGTTC...GGGCCGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp CTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGCCCTCGGAACCCTTTACCTTCTaGATCGGCCAAGTCCCATAT +
Preference number: 4 (lower is better)
Translates to: LPPLWNPPVPCPAYTRPSEPFTF*IGQVPY
Trigger: ATATGGGACTTGGCCGATCCAGAAGGTAAAGGGTTC...CGAGGGCCGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp ACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGACGGTGTGTCTTTCTCTTGGAGGGTaGGATGAGGGACGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: TLNKPPSPGPWSTVATVCLSLGG*DEGRGQ
Trigger: CTGCCCCCGTCCCTCATCCCACCCTCCAAGAGAAAG...ACACACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp TGTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCTTTCTCTTGGAGGGTaGGATGAGGGACGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: CQPRVAGMDRGPRESLRNLSLGG*DEGRGQ
Trigger: CTGCCCCCGTCCCTCATCCCACCCTCCAAGAGAAAG...GTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp CTGGGCGGTTTAGGCCGTGGAGGAGCAGGTTTCTTCGGAGGCAGAGCAGGAGTGTGCCGTGGGACGGCGTaGAGCGGAGGCTGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: LGGLGRGGAGFFGGRAGVCRGTA*SGGCLL
Trigger: CAAAAGACAGCCTCCGCTCCACGCCGTCCCACGGCA...CACTCCTGCTCTGCCTCCGAAGAAACCTGCTCCTCCACGGCCTAAACCGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CCA 90 bp CCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGAGCTTGGCCTTCTGCTaGTCCATCTCGTCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: PEWLEWIGGLGKVCGTKLSLAFC*SISSRR
Trigger: CCGCCTGGACGAGATGGACCAGCAGAAGGCCAAGCT...CAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp CCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGAGCTTGGCCTTCTGCTaGTCCATCTCGTCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: PSGWNGSGASGKSAEPSWSLAFC*SISSRR
Trigger: CCGCCTGGACGAGATGGACCAGCAGAAGGCCAAGCT...CCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp TTTCCAGGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGCTCCTGTGGGCCTCCTaGCGGCTTTCATGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: FPGLAAESAHPEQAPESRLLWAS*RLSCSW
Trigger: CCAGCTGCATGAAAGCCGCCAGGAGGCCCACAGGAG...CCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGACCTGGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp GGGGTGGCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCCCCTCCTGTGGGCCTCCTaGCGGCTTTCATGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GVARRRRTQLTEVKSAKPLLWAS*RLSCSW
Trigger: CCAGCTGCATGAAAGCCGCCAGGAGGCCCACAGGAG...GGGCTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGCCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp GCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAGTCAGGCTGGCACCATaGGCTCCATCGAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: ALGASSPRLTAVCSSPEEVRLAP*APSSTW
Trigger: CCAGGTGCTCGATGGAGCCCATGGTGCCAGCCTGAC...TTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp GAGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCCAGGTCGGTCAGGCTaGCACCATGGGCTCCATCGA +
Preference number: 4 (lower is better)
Translates to: ETKIPGKLQAEGSGVARRPGRSG*HHGLHR
Trigger: TCGATGGAGCCCATGGTGCCAGCCTGACCGACCTGG...CCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp TCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAGAGCGGGAGGCACCAGGTCGGTCAGGCTaGCACCATGGGCTCCATCGA +
Preference number: 4 (lower is better)
Translates to: SSPRLTAVCSSPEEEREAPGRSG*HHGLHR
Trigger: TCGATGGAGCCCATGGTGCCAGCCTGACCGACCTGG...TGCCTCCCGCTCTTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp AACAGATCTGGCGGGTGGGATGTTCTGCTGTCACACCAGGGGACCAGAGCCCCACGCCTTCGCTCAGGTTaGCCAGGTCGGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: NRSGGWDVLLSHQGTRAPRLRSG*PGRSGW
Trigger: CCAGCCTGACCGACCTGGCCAACCTGAGCGAAGGCG...TGGGGCTCTGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGCCAGATCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp ATCTGCACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGTCCTTGGAGTACGGTaGCGACGGTGTGTGTGTGTA +
Preference number: 4 (lower is better)
Translates to: ICTAPSLEPARALSRLHTVLGVR*RRCVCV
Trigger: TACACACACACACCGTCGCCACCGTACTCCAAGGAC...CGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGCAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CCA 90 bp GAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCTGTCTGACTGATGCGTaGGAGGGCGGGTGGGGATGT +
Preference number: 4 (lower is better)
Translates to: ESAHPEQAPESRSLEYGGCLTDA*EGGWGC
Trigger: ACATCCCCACCCGCCCTCCCACGCATCAGTCAGACA...GCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CCA 90 bp TGTCCTGGCCCGGCACCGCCAATAGGAAGTGAGACCGGCTCTGAAATCACAGCTCCATCTGCCCCTGCCTaGGGGCTGCCGAGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: CPGPAPPIGSETGSEITAPSAPA*GLPRRD
Trigger: GTCCCTTCTCGGCAGCCCCCAGGCAGGGGCAGATGG...AGCTGTGATTTCAGAGCCGGTCTCACTTCCTATTGGCGGTGCCGGGCCAGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CCA 90 bp CACACCCTGCCTCGGTCAGAAGTGGGATCTGCTGCGCCGCCAGGGCACGCACACTGTGTGAAGAGCCCCTaGTTTCAGGGCCCAAGGACA +
Preference number: 4 (lower is better)
Translates to: HTLPRSEVGSAAPPGHAHCVKSP*FQGPRT
Trigger: TGTCCTTGGGCCCTGAAACCAGGGGCTCTTCACACA...GTGTGCGTGCCCTGGCGGCGCAGCAGATCCCACTTCTGACCGAGGCAGGGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR TCA 90 bp GTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGGGGCTGCTGGTGTCGTaGAATTTAGGCGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: VLQPSLLTLNKPPSPGPWGLLVS*NLGGGM
Trigger: CATGCCACCGCCTAAATTTCACGACACCAGCAGCCC...CCAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp CGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGCGGGCTGCTGGTGTCGTaGAATTTAGGCGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: RVAGMDRGPRESLRNQAGGLLVS*NLGGGM
Trigger: CATGCCACCGCCTAAATTTCACGACACCAGCAGCCC...GCCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR TCA 90 bp CGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGCCCTTGTCAATGTCACTaGGGTCCCAGACCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RVAGMDRGPRESLRNQAGPCQCH*GPRPCP
Trigger: TGGGCAGGGTCTGGGACCTCAGTGACATTGACAAGG...GCCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR TCA 90 bp TCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCACCTTGTCAATGTCACTaGGGTCCCAGACCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SAPSGWNGSGASGKSAEPPCQCH*GPRPCP
Trigger: TGGGCAGGGTCTGGGACCTCAGTGACATTGACAAGG...TGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR TCA 90 bp CAGGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTCCGGCGAGAGGACTTaGGGAGGGTCGATGCCTTTA +
Preference number: 4 (lower is better)
Translates to: QVLQPSLLTLNKPPSPGPSGERT*GGSMPL
Trigger: TAAAGGCATCGACCCTCCTCAAGTCCTCTCGCCGGA...AGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp AGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGTCCGGCGAGAGGACTTaGGGAGGGTCGATGCCTTTA +
Preference number: 4 (lower is better)
Translates to: SPEWLEWIGGLGKVCGTKSGERT*GGSMPL
Trigger: TAAAGGCATCGACCCTCCTCAAGTCCTCTCGCCGGA...CTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR TCA 90 bp CCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTAGGAGCCGAGAGAGCCTaGACTGTCCGGGCCGGGCGT +
Preference number: 4 (lower is better)
Translates to: PGGGYGNHLITSPREKRVGAERA*TVRAGR
Trigger: ACGCCCGGCCCGGACAGTTCAGGCTCTCTCGGCTCC...TACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp CCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGCCCTCGCCTAGGAGTGATGAGATCATCTaGGTCTCATCCTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: PLWNPPVPCPAYTRPSPRSDEII*VSSWHF
Trigger: GAAGTGCCAGGATGAGACTCAGATGATCTCATCACT...CCTAGGCGAGGGCCGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602022.5
CDS-3UTR TCA 90 bp GCTGTTGAGGCTGCTGACGCTGCCGTGGGACGGCGTGGAGCGGAGGCTGTCTTTGCTTGGACATCTGGCTaGAGTCGGCAAAGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: AVEAADAAVGRRGAEAVFAWTSG*SRQSLQ
Trigger: CTGAAGGCTTTGCCGACTTCAGCCAGATGTCCAAGC...AAAGACAGCCTCCGCTCCACGCCGTCCCACGGCAGCGTCAGCAGCCTCAACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR TCA 90 bp AGCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAGCATGTCAGCCTTGCTaGGCGCGATGGCCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: SPGCFLSSTDRCVFVPRGACQPC*ARWPVP
Trigger: TGGAACTGGCCATCGCGCTCAGCAAGGCTGACATGC...TCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR TCA 90 bp AGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCACCACTGGGGGAGTGTCTaGCTGATGCGTGGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: RASPGDVTFPGLAAESAHHWGSV*LMRGRA
Trigger: CGCCCTCCCACGCATCAGTCAGACACTCCCCCAGTG...GTGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR TCA 90 bp CCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATCACTGGGGGAGTGTCTaGCTGATGCGTGGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: PPSPGPWSTVATVCVCIYHWGSV*LMRGRA
Trigger: CGCCCTCCCACGCATCAGTCAGACACTCCCCCAGTG...ATATATACACACACACACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR TCA 90 bp GTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCCCTTGGACATCTGGCTaGAGTCGGCAAAGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: VSPEWLEWIGGLGKVCGTPWTSG*SRQSLQ
Trigger: CTGAAGGCTTTGCCGACTTCAGCCAGATGTCCAAGG...GGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000594975.5
ENST00000602022.5
CDS-3UTR TCA 90 bp ACACACCCTGCCTCGGTCAGAAGTGGGATCTGCTGCGCCGCCAGGGCACGCACAACAGCTGCATGTGTGTaGAGAGCCCCTGGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: THPASVRSGICCAARARTTAACV*RAPGFR
Trigger: CCTGAAACCAGGGGCTCTTCACACACATGCAGCTGT...TGTGCGTGCCCTGGCGGCGCAGCAGATCCCACTTCTGACCGAGGCAGGGTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR TCA 90 bp ACACACCCTGCCTCGGTCAGAAGTGGGATCTGCTGCGCCGCCAGGGCACGCACACTGCAAGGTCAGGGTTaGGCTCAGAATGCGGCTGTA +
Preference number: 4 (lower is better)
Translates to: THPASVRSGICCAARARTLQGQG*AQNAAV
Trigger: TACAGCCGCATTCTGAGCTCAACCCTGACCTTGCAG...TGTGCGTGCCCTGGCGGCGCAGCAGATCCCACTTCTGACCGAGGCAGGGTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR GCA 90 bp AGGCTGTGCTTGGGGGACAGGCTCCCTGTGCTGTTGAGGCTGCTGACGCTGCCGCACCCTCCCTGTGTATaGCGGATCGACCTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: RLCLGDRLPVLLRLLTLPHPPCV*RIDLLV
Trigger: TACAAGCAGGTCGATCCGGCATACACAGGGAGGGTG...CGGCAGCGTCAGCAGCCTCAACAGCACAGGGAGCCTGTCCCCCAAGCACAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000593760.5
CDS-3UTR GCA 90 bp GGGGAAGCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGTTTGCTTGAGGCTGTaGTTGGGGGACAGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: GEALGASSPRLTAVCSSPVCLRL*LGDRLP
Trigger: AGGGAGCCTGTCCCCCAAGCACAGCCTCAAGCAAAC...TGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGCTTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp CCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGTTTGCTTGAGGCTGTaGTTGGGGGACAGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: PEWLEWIGGLGKVCGTKLVCLRL*LGDRLP
Trigger: AGGGAGCCTGTCCCCCAAGCACAGCCTCAAGCAAAC...CAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp GTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGCTTAACTTCCCCGTTTaGCTCGTATCGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VLQPSLLTLNKPPSPGPWLNFPV*LVSARA
Trigger: GGCCCTGGCCGATACGAGGCAAACGGGGAAGTTAAG...CCAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp GCAAAGCCCGAGGCAGAGGCCTTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATTGTCCGGGCCGGGCGTaGCTCTCTCCGAAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: AKPEAEALEGLAAEEGTNCPGRA*LSPKAG
Trigger: TCCCGCCTTCGGAGAGAGGCACGCCCGGCCCGGACA...ATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAAGGCCTCTGCCTCGGGCTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR GCA 90 bp GAGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGCTTGGCCTTCTaGTGGTCCATCTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: ETKIPGKLQAEGSGVARRRSLAF*WSISSR
Trigger: CCTGGACGAGATGGACCAGCAGAAGGCCAAGCTCCG...CCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp GTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAGCTGGGTTTCCTCCTaGTGCAATCGGTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VSPEWLEWIGGLGKVCGTSWVSS*CNRFSS
Trigger: GGAGCTGAACCGATTGCAGCAGGAGGAAACCCAGCT...GGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp CAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGACTCGCCCAGCCTGAATaGTCTGCTCCAGCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: QKSQGSCKRKGVGWPGGGLAQPE*SAPAGF
Trigger: AAACCCAGCTGGAGCAGAGCATTCAGGCTGGGCGAG...TCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp AGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGCTCGCCCAGCCTGAATaGTCTGCTCCAGCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: SLLTLNKPPSPGPWSTVALAQPE*SAPAGF
Trigger: AAACCCAGCTGGAGCAGAGCATTCAGGCTGGGCGAG...CGCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp CCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGCTCGCCCAGCCTGAATaGTCTGCTCCAGCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: PEWLEWIGGLGKVCGTKLLAQPE*SAPAGF
Trigger: AAACCCAGCTGGAGCAGAGCATTCAGGCTGGGCGAG...CAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp GCACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGCCCGGAAAGTTTGCTCCTTaGCTGGTTGATTTCGTCTTG +
Preference number: 4 (lower is better)
Translates to: ALPPLWNPPVPCPAYTRPGKFAP*LVDFVL
Trigger: CAAGACGAAATCAACCAGGCAAGGAGCAAACTTTCC...GGGCCGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp AGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGAAAACTGCCCCTCTCTaGCAGGGAGACGCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: SPEWLEWIGGLGKVCGTKKTAPL*QGDAFA
Trigger: AGCGAAGGCGTCTCCCTGGCAGAGAGGGGCAGTTTT...CTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp TGTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACAAAACTGCCCCTCTCTaGCAGGGAGACGCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: CQPRVAGMDRGPRESLRNKTAPL*QGDAFA
Trigger: AGCGAAGGCGTCTCCCTGGCAGAGAGGGGCAGTTTT...GTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp AGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCCATGGCTCCAAAACTaGCCCTCTCTGCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: SPEWLEWIGGLGKVCGTKPWLQN*PSLPGR
Trigger: TCTCCCTGGCAGAGAGGGGCAGTTTTGGAGCCATGG...CTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp CGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGCCCATGGCTCCAAAACTaGCCCTCTCTGCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: RVAGMDRGPRESLRNQAGPWLQN*PSLPGR
Trigger: TCTCCCTGGCAGAGAGGGGCAGTTTTGGAGCCATGG...GCCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp AAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGATACAGAGGTGAAGTCTaGAAAGCCCGAGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: KSQGSCKRKGVGWPGGGGYRGEV*KARGRG
Trigger: GCCTCTGCCTCGGGCTTTGCAGACTTCACCTCTGTA...TCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp CCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGAAATCCCAGGGAAGCTaGAAGCGGAAGGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: PSGWNGSGASGKSAEPSWKSQGS*KRKGVG
Trigger: CCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTT...CCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp TGTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACGCCCACGCCAGCTGCTaGTCCTCATTGCCAAAAGAG +
Preference number: 4 (lower is better)
Translates to: CQPRVAGMDRGPRESLRNAHASC*SSLPKE
Trigger: CTCTTTTGGCAATGAGGAGCAGCAGCTGGCGTGGGC...GTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602022.5
CDS-3UTR GCA 90 bp TCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCACCCTGAAAGTTCCAGGTCCTCCTaGTCCTGCCGCCGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SPGDVTFPGLAAESAHPESSRSS*SCRRSR
Trigger: GCGGCTGCGGCGGCAGGAGCAGGAGGACCTGGAACT...TTCAGGGTGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR GCA 90 bp CTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGCCCTCGGTATATATAGACATCTaGACTGCCCCCTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LPPLWNPPVPCPAYTRPSVYIDI*TAPSLE
Trigger: TTCCAGAGAGGGGGCAGTGCAGATGTCTATATATAC...CGAGGGCCGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR GCA 90 bp GGGGAAGCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGACCTTTCCAGGTCTTaGAGCCGAGTCTGCTCACCC +
Preference number: 4 (lower is better)
Translates to: GEALGASSPRLTAVCSSPDLSRS*SRVCSP
Trigger: GGGTGAGCAGACTCGGCTGCAAGACCTGGAAAGGTC...TGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGCTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR GCA 90 bp AACAGATCTGGCGGGTGGGATGTTCTGCTGTCACACCAGGGGACCAGAGCCCCACAGCACGGAGAGAGCTaGTGGAGGCAGCAGAGCACC +
Preference number: 4 (lower is better)
Translates to: NRSGGWDVLLSHQGTRAPQHGES*WRQQST
Trigger: GGTGCTCTGCTGCCTCCAGCAGCTCTCTCCGTGCTG...TGGGGCTCTGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGCCAGATCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp TCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAGAGCGGGAGGCACTTTCTCTTGGAGGGTaGGATGAGGGACGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SSPRLTAVCSSPEEEREALSLGG*DEGRGQ
Trigger: CTGCCCCCGTCCCTCATCCCACCCTCCAAGAGAAAG...TGCCTCCCGCTCTTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp GCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCCCGAGGCATGCTCCAGGCTCCTGTaGGCCTCCTGGCGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: ARRRRTQLTEVKSAKPEACSRLL*ASWRLS
Trigger: TGAAAGCCGCCAGGAGGCCCACAGGAGCCTGGAGCA...TGCCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp GGCCATGAACAGATCTGGCGGGTGGGATGTTCTGCTGTCACACCAGGGGACCAGTGCTCCAGGCTCCTGTaGGCCTCCTGGCGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: GHEQIWRVGCSAVTPGDQCSRLL*ASWRLS
Trigger: TGAAAGCCGCCAGGAGGCCCACAGGAGCCTGGAGCA...CTGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp AGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGGCTCCATCGAGCACCTaGTCATACTGCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SPEWLEWIGGLGKVCGTKAPSST*SYCSRL
Trigger: GAGCCTGGAGCAGTATGACCAGGTGCTCGATGGAGC...CTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp TGTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACGCTCCATCGAGCACCTaGTCATACTGCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: CQPRVAGMDRGPRESLRNAPSST*SYCSRL
Trigger: GAGCCTGGAGCAGTATGACCAGGTGCTCGATGGAGC...GTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp TTGTGGCTACTGCCTCTTCCCGCAGCGTGGATAATGCCTGGGCCTCTGCAGGTGCCAGGTCGGTCAGGCTaGCACCATGGGCTCCATCGA +
Preference number: 4 (lower is better)
Translates to: LWLLPLPAAWIMPGPLQVPGRSG*HHGLHR
Trigger: TCGATGGAGCCCATGGTGCCAGCCTGACCGACCTGG...CACCTGCAGAGGCCCAGGCATTATCCACGCTGCGGGAAGAGGCAGTAGCCACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CCA 90 bp CCTCTGCCCAGGCTCATCTGTGTAAACACACACCCTGCCTCGGTCAGAAGTGGGCGCCTTCGCTCAGGTTaGCCAGGTCGGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PLPRLICVNTHPASVRSGRLRSG*PGRSGW
Trigger: CCAGCCTGACCGACCTGGCCAACCTGAGCGAAGGCG...CCCACTTCTGACCGAGGCAGGGTGTGTGTTTACACAGATGAGCCTGGGCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CCA 90 bp ACACGGGGCAGCCAAGGGAGACTGCCCAGTCACACTGGCACCTGGGGCACCTGGGCAAAGGGGTCATTCTaGAACGGGTCGCCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: TRGSQGRLPSHTGTWGTWAKGSF*NGSPLK
Trigger: CTTCAAAGGCGACCCGTTCCAGAATGACCCCTTTGC...CCAGGTGCCCCAGGTGCCAGTGTGACTGGGCAGTCTCCCTTGGCTGCCCCGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CCA 90 bp CCCTGTGCTGTTGAGGCTGCTGACGCTGCCGTGGGACGGCGTGGAGCGGAGGCTGGCAGAGCCACGGAATaGGTCACTTTCTTTGAAAGG +
Preference number: 4 (lower is better)
Translates to: PCAVEAADAAVGRRGAEAGRATE*VTFFER
Trigger: CCTTTCAAAGAAAGTGACCCATTCCGTGGCTCTGCC...AGCCTCCGCTCCACGCCGTCCCACGGCAGCGTCAGCAGCCTCAACAGCACAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CCA 90 bp GCACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGCCCAGGGTTTTTCGTGAATaGATCCGAGGTAAATGGGTC +
Preference number: 4 (lower is better)
Translates to: ALPPLWNPPVPCPAYTRPRVFRE*IRGKWV
Trigger: GACCCATTTACCTCGGATCCATTCACGAAAAACCCT...GGGCCGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp CAGGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTGGGGGCTTGGACATCTaGCTGAAGTCGGCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: QVLQPSLLTLNKPPSPGPGGLDI*LKSAKP
Trigger: AGGCTTTGCCGACTTCAGCCAGATGTCCAAGCCCCC...AGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000455140.7
CDS-3UTR CCA 90 bp GCCCACGCCAGCTGCTGCTCCTCATTGCCAAAAGAGGTGAAGTCTGCAAAGCCCTCTCGCTCTCCCGCTTaGCCCACGCCAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: AHASCCSSLPKEVKSAKPSRSPA*PTPAAA
Trigger: AGCAGCAGCTGGCGTGGGCCAAGCGGGAGAGCGAGA...GGGCTTTGCAGACTTCACCTCTTTTGGCAATGAGGAGCAGCAGCTGGCGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602022.5
CDS-3UTR CCA 90 bp CGGGGAAGCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCGTCCTTGGAGTACGGTaGCGACGGTGTGTGTGTGTA +
Preference number: 4 (lower is better)
Translates to: RGSPGCFLSSTDRCVFVPVLGVR*RRCVCV
Trigger: TACACACACACACCGTCGCCACCGTACTCCAAGGAC...GGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGCTTCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CCA 90 bp GGAGCCTGTGCACTGGGCCCTAAATCTTCTGCCAGTCCCAAACCGTGTCACAGCACTGCCCAGTCACACTaGCACCTGGGGCACCTGGGC +
Preference number: 4 (lower is better)
Translates to: GACALGPKSSASPKPCHSTAQSH*HLGHLG
Trigger: GCCCAGGTGCCCCAGGTGCCAGTGTGACTGGGCAGT...GCTGTGACACGGTTTGGGACTGGCAGAAGATTTAGGGCCCAGTGCACAGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR TCA 90 bp GAGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGGGGCTGCTGGTGTCGTaGAATTTAGGCGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: ETKIPGKLQAEGSGVARRGLLVS*NLGGGM
Trigger: CATGCCACCGCCTAAATTTCACGACACCAGCAGCCC...CCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp GCCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTCTGCAGAGGGCGGTGTaGCCATCAGAGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ARGRLWKPPHYESTRKESLQRAV*PSEGCW
Trigger: CCAGCAGCCCTCTGATGGTCACACCGCCCTCTGCAG...ACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597937.5
CDS-3UTR TCA 90 bp AGGCTCCCTGTGCTGTTGAGGCTGCTGACGCTGCCGTGGGACGGCGTGGAGCGGATCAAGAGGCAGCTTTaGGTTCATGAGGACTGGCTT +
Preference number: 4 (lower is better)
Translates to: RLPVLLRLLTLPWDGVERIKRQL*VHEDWL
Trigger: AAGCCAGTCCTCATGAACTCAAAGCTGCCTCTTGAT...CCGCTCCACGCCGTCCCACGGCAGCGTCAGCAGCCTCAACAGCACAGGGAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000593760.5
CDS-3UTR TCA 90 bp CAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAATTGGCTGTGTTTGCTTaGGGCTGTGCTTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: QPRVAGMDRGPRESLRNQLAVFA*GCAWGT
Trigger: TGTCCCCCAAGCACAGCCTCAAGCAAACACAGCCAA...TTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR TCA 90 bp CCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGTTGGCTGTGTTTGCTTaGGGCTGTGCTTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: PEWLEWIGGLGKVCGTKLLAVFA*GCAWGT
Trigger: TGTCCCCCAAGCACAGCCTCAAGCAAACACAGCCAA...CAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR TCA 90 bp TGTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACTTGGCTGTGTTTGCTTaGGGCTGTGCTTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: CQPRVAGMDRGPRESLRNLAVFA*GCAWGT
Trigger: TGTCCCCCAAGCACAGCCTCAAGCAAACACAGCCAA...GTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR TCA 90 bp TCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAGAGCGGGAGGCAGTCAGCCCTTGGCTGTGTTTGCTTaGGGCTGTGCTTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: STDRCVFVPRGRAGGSQPLAVFA*GCAWGT
Trigger: TGTCCCCCAAGCACAGCCTCAAGCAAACACAGCCAA...GGGCTGACTGCCTCCCGCTCTTCCTCTGGGGACGAACACACAGCGGTCAGTCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp GAGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGTCCGGCGAGAGGACTTaGGGAGGGTCGATGCCTTTA +
Preference number: 4 (lower is better)
Translates to: ETKIPGKLQAEGSGVARRSGERT*GGSMPL
Trigger: TAAAGGCATCGACCCTCCTCAAGTCCTCTCGCCGGA...CCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp CAGGCAGGACGGGGACGGCGCCAGGGAACACAGTCTTCTTTCTCTTGGAGGGTGTCCGGCGAGAGGACTTaGGGAGGGTCGATGCCTTTA +
Preference number: 4 (lower is better)
Translates to: QAGRGRRQGTQSSFSWRVSGERT*GGSMPL
Trigger: TAAAGGCATCGACCCTCCTCAAGTCCTCTCGCCGGA...CACCCTCCAAGAGAAAGAAGACTGTGTTCCCTGGCGCCGTCCCCGTCCTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR TCA 90 bp GAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCCCGAGGCAGAGGCCTTAGAGGAGCCGAGAGAGCCTaGACTGTCCGGGCCGGGCGT +
Preference number: 4 (lower is better)
Translates to: EDSTYRGEVCKARGRGLRGAERA*TVRAGR
Trigger: ACGCCCGGCCCGGACAGTTCAGGCTCTCTCGGCTCC...TCTAAGGCCTCTGCCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp GCCCACGCCAGCTGCTGCTCCTCATTGCCAAAAGAGGTGAAGTCTGCAAAGCCCTGGACTCGCCCAGCCTaGATGCTCTGCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: AHASCCSSLPKEVKSAKPWTRPA*MLCSSW
Trigger: CCAGCTGGAGCAGAGCATTCAGGCTGGGCGAGTCCA...GGGCTTTGCAGACTTCACCTCTTTTGGCAATGAGGAGCAGCAGCTGGCGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602022.5
CDS-3UTR TCA 90 bp TGTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCCTTGGACATCTGGCTaGAGTCGGCAAAGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: CQPRVAGMDRGPRESLRNPWTSG*SRQSLQ
Trigger: CTGAAGGCTTTGCCGACTTCAGCCAGATGTCCAAGG...GTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000594975.5
ENST00000602022.5
CDS-3UTR TCA 90 bp AGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGCCTTGGACATCTGGCTaGAGTCGGCAAAGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: SLLTLNKPPSPGPWSTVAPWTSG*SRQSLQ
Trigger: CTGAAGGCTTTGCCGACTTCAGCCAGATGTCCAAGG...CGCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602022.5
CDS-3UTR GCA 90 bp CAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGATTTCCAGTGGGAATCTaGTGGGAGAGGGGGATGAGC +
Preference number: 4 (lower is better)
Translates to: QKSQGSCKRKGVGWPGGGFPVGI*WERGMS
Trigger: GCTCATCCCCCTCTCCCAGCAGATTCCCACTGGAAA...TCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp CCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGTTTCCAGTGGGAATCTaGTGGGAGAGGGGGATGAGC +
Preference number: 4 (lower is better)
Translates to: PEWLEWIGGLGKVCGTKLFPVGI*WERGMS
Trigger: GCTCATCCCCCTCTCCCAGCAGATTCCCACTGGAAA...CAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp CGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGCCACCCTCCCTGTGTATaGCGGATCGACCTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: RVAGMDRGPRESLRNQAGHPPCV*RIDLLV
Trigger: TACAAGCAGGTCGATCCGGCATACACAGGGAGGGTG...GCCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp CAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAACACCCTCCCTGTGTATaGCGGATCGACCTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: QPRVAGMDRGPRESLRNQHPPCV*RIDLLV
Trigger: TACAAGCAGGTCGATCCGGCATACACAGGGAGGGTG...TTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp AGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCACCCTCCCTGTGTATaGCGGATCGACCTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: SPEWLEWIGGLGKVCGTKHPPCV*RIDLLV
Trigger: TACAAGCAGGTCGATCCGGCATACACAGGGAGGGTG...CTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp CGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGCTTCATGGCCACTCTGTaGACAGGCCACCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: RVAGMDRGPRESLRNQAGFMATL*TGHQSQ
Trigger: CTGAGACTGGTGGCCTGTGCACAGAGTGGCCATGAA...GCCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp CCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTTTCATGGCCACTCTGTaGACAGGCCACCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: PRVAGMDRGPRESLRNQAFMATL*TGHQSQ
Trigger: CTGAGACTGGTGGCCTGTGCACAGAGTGGCCATGAA...AGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp CCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGCTCGGTACACCAAGTaGATGGCCACAGCGAACTCA +
Preference number: 4 (lower is better)
Translates to: PRVAGMDRGPRESLRNQAARYTK*MATANS
Trigger: TGAGTTCGCTGTGGCCATGCACTTGGTGTACCGAGC...AGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp AGCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAGTTTGCTTGAGGCTGTaGTTGGGGGACAGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SPGCFLSSTDRCVFVPRGVCLRL*LGDRLP
Trigger: AGGGAGCCTGTCCCCCAAGCACAGCCTCAAGCAAAC...TCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp AAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGAACTGTTGGCTGTGTTTaGTTGAGGCTGTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: KSQGSCKRKGVGWPGGGGTVGCV*LRLCLG
Trigger: CCCCAAGCACAGCCTCAAGCAAACACAGCCAACAGT...TCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp AAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGAAAATCGCATCTTGTCTaGCACGGGCACCACCCAGTT +
Preference number: 4 (lower is better)
Translates to: KSQGSCKRKGVGWPGGGGKSHLV*HGHHPV
Trigger: AACTGGGTGGTGCCCGTGGCAGACAAGATGCGATTT...TCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp AAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGTGGGTGAGGCCCGAGTaGATGAAGATCTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: KNPREAASGREWGGPEAEWVRPE*MKISFT
Trigger: GGTGAAGGAGATCTTCATGCACTCGGGCCTCACCCA...CTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp CCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTTGGGTGAGGCCCGAGTaGATGAAGATCTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: PRVAGMDRGPRESLRNQAWVRPE*MKISFT
Trigger: GGTGAAGGAGATCTTCATGCACTCGGGCCTCACCCA...AGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp CCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGTGGGTGAGGCCCGAGTaGATGAAGATCTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: PEWLEWIGGLGKVCGTKLWVRPE*MKISFT
Trigger: GGTGAAGGAGATCTTCATGCACTCGGGCCTCACCCA...CAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp GAGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCTTAACTTCCCCGTTTaGCTCGTATCGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ETKIPGKLQAEGSGVARRLNFPV*LVSARA
Trigger: GGCCCTGGCCGATACGAGGCAAACGGGGAAGTTAAG...CCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp GTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCCGAGCTCCTGCAAACTaGTTGTTTCCCGGTCTAGGT +
Preference number: 4 (lower is better)
Translates to: VSPEWLEWIGGLGKVCGTRAPAN*LFPGLG
Trigger: ACCTAGACCGGGAAACAAGCAGTTTGCAGGAGCTCG...GGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp TCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAGAGCGGGAGGCATCATCCTGGCACTTCTaGCGGACGTCGCTCAGCATG +
Preference number: 4 (lower is better)
Translates to: SSPRLTAVCSSPEEEREASSWHF*RTSLSM
Trigger: CATGCTGAGCGACGTCCGGCAGAAGTGCCAGGATGA...TGCCTCCCGCTCTTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp GCTGGGCGGTTTAGGCCGTGGAGGAGCAGGTTTCTTCGGAGGCAGAGCAGGAGTTCATCCTGGCACTTCTaGCGGACGTCGCTCAGCATG +
Preference number: 4 (lower is better)
Translates to: AGRFRPWRSRFLRRQSRSSSWHF*RTSLSM
Trigger: CATGCTGAGCGACGTCCGGCAGAAGTGCCAGGATGA...ACTCCTGCTCTGCCTCCGAAGAAACCTGCTCCTCCACGGCCTAAACCGCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR GCA 90 bp AAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGTGGGTTTCCTCCTGCTaGAATCGGTTCAGCTCCGAC +
Preference number: 4 (lower is better)
Translates to: KNPREAASGREWGGPEAEWVSSC*NRFSSD
Trigger: GTCGGAGCTGAACCGATTGCAGCAGGAGGAAACCCA...CTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp CCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGTGGGTTTCCTCCTGCTaGAATCGGTTCAGCTCCGAC +
Preference number: 4 (lower is better)
Translates to: PEWLEWIGGLGKVCGTKLWVSSC*NRFSSD
Trigger: GTCGGAGCTGAACCGATTGCAGCAGGAGGAAACCCA...CAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp CCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGTGGGTTTCCTCCTGCTaGAATCGGTTCAGCTCCGAC +
Preference number: 4 (lower is better)
Translates to: PSGWNGSGASGKSAEPSWWVSSC*NRFSSD
Trigger: GTCGGAGCTGAACCGATTGCAGCAGGAGGAAACCCA...CCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp CCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGAGCTGGGTTTCCTCCTaGTGCAATCGGTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PSGWNGSGASGKSAEPSWSWVSS*CNRFSS
Trigger: GGAGCTGAACCGATTGCAGCAGGAGGAAACCCAGCT...CCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp AAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGAGCTGGGTTTCCTCCTaGTGCAATCGGTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KNPREAASGREWGGPEAESWVSS*CNRFSS
Trigger: GGAGCTGAACCGATTGCAGCAGGAGGAAACCCAGCT...CTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp GGGGTGGCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCCCCTCGCCCAGCCTGAATaGTCTGCTCCAGCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: GVARRRRTQLTEVKSAKPLAQPE*SAPAGF
Trigger: AAACCCAGCTGGAGCAGAGCATTCAGGCTGGGCGAG...GGGCTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp AGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCCCATGGCTCCAAAACTaGCCCTCTCTGCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: RQKSQGSCKRKGVGWPGGPWLQN*PSLPGR
Trigger: TCTCCCTGGCAGAGAGGGGCAGTTTTGGAGCCATGG...GCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp CCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGCCCTCGCCTAGGTCTGTTGAAGTTGTCTaGTGTTCTGCAAAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: PLWNPPVPCPAYTRPSPRSVEVV*CSAKGS
Trigger: TGACCCCTTTGCAGAACAGCAGACAACTTCAACAGA...CCTAGGCGAGGGCCGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602022.5
CDS-3UTR GCA 90 bp GGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAGAGCGGGCCCACGCCAGCTGCTaGTCCTCATTGCCAAAAGAG +
Preference number: 4 (lower is better)
Translates to: GASSPRLTAVCSSPEEERAHASC*SSLPKE
Trigger: CTCTTTTGGCAATGAGGAGCAGCAGCTGGCGTGGGC...CCGCTCTTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp TCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAGAGCGGGAGGCAGTCAGCCCTTGGCCCACGCCAGCTaGTGCTCCTCATTGCCAAAA +
Preference number: 4 (lower is better)
Translates to: STDRCVFVPRGRAGGSQPLAHAS*CSSLPK
Trigger: TTTTGGCAATGAGGAGCAGCAGCTGGCGTGGGCCAA...GGGCTGACTGCCTCCCGCTCTTCCTCTGGGGACGAACACACAGCGGTCAGTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp TGTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACTTGGCCCACGCCAGCTaGTGCTCCTCATTGCCAAAA +
Preference number: 4 (lower is better)
Translates to: CQPRVAGMDRGPRESLRNLAHAS*CSSLPK
Trigger: TTTTGGCAATGAGGAGCAGCAGCTGGCGTGGGCCAA...GTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602022.5
CDS-3UTR GCA 90 bp TTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAGAGCGGGAGGCGACCTTTCCAGGTCTTaGAGCCGAGTCTGCTCACCC +
Preference number: 4 (lower is better)
Translates to: FLSSTDRCVFVPRGRAGGDLSRS*SRVCSP
Trigger: GGGTGAGCAGACTCGGCTGCAAGACCTGGAAAGGTC...GCCTCCCGCTCTTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR GCA 90 bp GAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGCCCACGCCAGCTGCTaGTCCTCATTGCCAAATTTG +
Preference number: 4 (lower is better)
Translates to: ESAHPEQAPESRSLEYGGAHASC*SSLPNL
Trigger: CAAATTTGGCAATGAGGAGCAGCAGCTGGCGTGGGC...GCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594851.5
CDS-3UTR GCA 90 bp GAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCTTGGCCCACGCCAGCTaGTGCTCCTCATTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: ESAHPEQAPESRSLEYGGLAHAS*CSSLPN
Trigger: ATTTGGCAATGAGGAGCAGCAGCTGGCGTGGGCCAA...GCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594851.5
CDS-3UTR GCA 90 bp CCGGCACCGCCAATAGGAAGTGAGACCGGCTCTGAAATCACAGCTGCATGTGTGGTCAGAAGTGGGATCTaGTGCGCCGCCAGGGCACGC +
Preference number: 4 (lower is better)
Translates to: PAPPIGSETGSEITAACVVRSGI*CAARAR
Trigger: GCGTGCCCTGGCGGCGCAGCAGATCCCACTTCTGAC...CACACATGCAGCTGTGATTTCAGAGCCGGTCTCACTTCCTATTGGCGGTGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR GCA 90 bp TGTCCTGGCCCGGCACCGCCAATAGGAAGTGAGACCGGCTCTGAAATCACAGCTCGCCTGAGGGACTGCTaGCACCGTGTGGCCAACGTT +
Preference number: 4 (lower is better)
Translates to: CPGPAPPIGSETGSEITARLRDC*HRVANV
Trigger: AACGTTGGCCACACGGTGGCAGCAGTCCCTCAGGCG...AGCTGTGATTTCAGAGCCGGTCTCACTTCCTATTGGCGGTGCCGGGCCAGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR GCA 90 bp AAGGAAGAGGAGTCCACTTGCGACAACCAGAAACGACCAGGACGCCTGAGGGACGGACGCCTGAGGGACTaGTGCCACCGTGTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: KEEESTCDNQKRPGRLRDGRLRD*CHRVAN
Trigger: GTTGGCCACACGGTGGCAGCAGTCCCTCAGGCGTCC...GTCCCTCAGGCGTCCTGGTCGTTTCTGGTTGTCGCAAGTGGACTCCTCTTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR GCA 90 bp CACACCCTGCCTCGGTCAGAAGTGGGATCTGCTGCGCCGCCAGGGCACGCACACGAAGAGGAGTCCACTTaGGACAACCAGAAACGACCA +
Preference number: 4 (lower is better)
Translates to: HTLPRSEVGSAAPPGHAHEEEST*DNQKRP
Trigger: TGGTCGTTTCTGGTTGTCGCAAGTGGACTCCTCTTC...GTGTGCGTGCCCTGGCGGCGCAGCAGATCCCACTTCTGACCGAGGCAGGGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR GCA 90 bp CACACCCTGCCTCGGTCAGAAGTGGGATCTGCTGCGCCGCCAGGGCACGCACACGGGTTGAGCTCAGAATaGGGCTGTACAAGTGTCATG +
Preference number: 4 (lower is better)
Translates to: HTLPRSEVGSAAPPGHAHGLSSE*GCTSVM
Trigger: CATGACACTTGTACAGCCGCATTCTGAGCTCAACCC...GTGTGCGTGCCCTGGCGGCGCAGCAGATCCCACTTCTGACCGAGGCAGGGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CCA 90 bp AGTGGGGTGGCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCCAGTGGGAATCTGCTaGGAGAGGGGGATGAGCGGC +
Preference number: 4 (lower is better)
Translates to: SGVARRRRTQLTEVKSAKPVGIC*ERGMSG
Trigger: GCCGCTCATCCCCCTCTCCCAGCAGATTCCCACTGG...CTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGCCACCCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp CGGGGAAGCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCCTCAAGGTAACTTCATaGCCACTCTGTGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: RGSPGCFLSSTDRCVFVPLKVTS*PLCAQA
Trigger: GGCCTGTGCACAGAGTGGCCATGAAGTTACCTTGAG...GGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGCTTCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp GCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCCCGAGGCACTTTCTCTTGGAGGGTaGGATGAGGGACGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: ARRRRTQLTEVKSAKPEALSLGG*DEGRGQ
Trigger: CTGCCCCCGTCCCTCATCCCACCCTCCAAGAGAAAG...TGCCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp CCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTTGTGCTAGAAGGTTCTaGGTGAGGCCCGAGTGCATG +
Preference number: 4 (lower is better)
Translates to: PRVAGMDRGPRESLRNQACARRF*VRPECM
Trigger: CATGCACTCGGGCCTCACCCAGAACCTTCTAGCACA...AGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp GGGGGCCAGACACAAGAGACAGATGAGCTCGCCAGCAGTGCCTTCCCAGCAGCCTGTGCTAGAAGGTTCTaGGTGAGGCCCGAGTGCATG +
Preference number: 4 (lower is better)
Translates to: GGQTQETDELASSAFPAACARRF*VRPECM
Trigger: CATGCACTCGGGCCTCACCCAGAACCTTCTAGCACA...GGCTGCTGGGAAGGCACTGCTGGCGAGCTCATCTGTCTCTTGTGTCTGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp GTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGGCATGTCTCGGAGCTTaGCCTTCTGCTGGTCCATCT +
Preference number: 4 (lower is better)
Translates to: VLQPSLLTLNKPPSPGPWACLGA*PSAGPS
Trigger: AGATGGACCAGCAGAAGGCCAAGCTCCGAGACATGC...CCAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp TGTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACGCATGTCTCGGAGCTTaGCCTTCTGCTGGTCCATCT +
Preference number: 4 (lower is better)
Translates to: CQPRVAGMDRGPRESLRNACLGA*PSAGPS
Trigger: AGATGGACCAGCAGAAGGCCAAGCTCCGAGACATGC...GTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp AAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGAGGTTCAGCTCCGACTTaGCTCGGTTCAGATCGTCTT +
Preference number: 4 (lower is better)
Translates to: KSQGSCKRKGVGWPGGGGGSAPT*LGSDRL
Trigger: AAGACGATCTGAACCGAGCCAAGTCGGAGCTGAACC...TCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp GGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGACTCAACTTGGTTCAGCTCCGACTTaGCTCGGTTCAGATCGTCTT +
Preference number: 4 (lower is better)
Translates to: GKLQAEGSGVARRRRTQLGSAPT*LGSDRL
Trigger: AAGACGATCTGAACCGAGCCAAGTCGGAGCTGAACC...AAGTTGAGTCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp CCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATTGCTCCAGGCTCCTGTaGGCCTCCTGGCGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: PPSPGPWSTVATVCVCIYCSRLL*ASWRLS
Trigger: TGAAAGCCGCCAGGAGGCCCACAGGAGCCTGGAGCA...ATATATACACACACACACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp CCCGTGCCCTGTCCCGCCTACACACGGCCCTCGCCTAGGCGGCAGGCATGTCAGGTCAGCTCCTTTAAATaGGTCAGATTTGAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: PVPCPAYTRPSPRRQACQVSSFK*VRFEGV
Trigger: GACCCCTTCAAATCTGACCCATTTAAAGGAGCTGAC...CTGACATGCCTGCCGCCTAGGCGAGGGCCGTGTGTAGGCGGGACAGGGCACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602022.5
CDS-3UTR CCA 90 bp CAGGCAGGACGGGGACGGCGCCAGGGAACACAGTCTTCTTTCTCTTGGAGGGTGGGGGGCTTGGACATCTaGCTGAAGTCGGCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: QAGRGRRQGTQSSFSWRVGGLDI*LKSAKP
Trigger: AGGCTTTGCCGACTTCAGCCAGATGTCCAAGCCCCC...CACCCTCCAAGAGAAAGAAGACTGTGTTCCCTGGCGCCGTCCCCGTCCTGCCTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CCA 90 bp TGTAAGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCAGCCCCGAGTGGCTaGAATGGATCGGGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: CKGFPRRCDLSRSCSRVCSAPSG*NGSGAS
Trigger: CGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGA...GCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCTTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CCA 90 bp GGGGGCCAGACACAAGAGACAGATGAGCTCGCCAGCAGTGCCTTCCCAGCAGCCGAAAGAGCAACACCCTaGGGCGCTGCTTGCCATTAC +
Preference number: 4 (lower is better)
Translates to: GGQTQETDELASSAFPAAERATP*GAACHY
Trigger: GTAATGGCAAGCAGCGCCCCAGGGTGTTGCTCTTTC...GGCTGCTGGGAAGGCACTGCTGGCGAGCTCATCTGTCTCTTGTGTCTGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp GGCCATGAACAGATCTGGCGGGTGGGATGTTCTGCTGTCACACCAGGGGACCAGGCCCGGGGGCGGCTATaGAAACCACCTCATTACGAG +
Preference number: 4 (lower is better)
Translates to: GHEQIWRVGCSAVTPGDQARGRL*KPPHYE
Trigger: CTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGGC...CTGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp CACCAAGGAAACATCCAGACATGCGCGGCCCGGCCCATCCGCTCCCGGAACAGCAGTTGGGGGAATCACTaGCCACTTGCAAACTGCCAC +
Preference number: 4 (lower is better)
Translates to: HQGNIQTCAARPIRSRNSSWGNH*PLANCH
Trigger: GTGGCAGTTTGCAAGTGGCCAGTGATTCCCCCAACT...GCTGTTCCGGGAGCGGATGGGCCGGGCCGCGCATGTCTGGATGTTTCCTTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp GAACACGGGGCAGCCAAGGGAGACTGCCCAGTCACACTGGCACCTGGGGCACCTACTGCTGCCACCGTGTaGCCAACGTTTTCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: EHGAAKGDCPVTLAPGAPTAATV*PTFSAF
Trigger: GAAAGCAGAAAACGTTGGCCACACGGTGGCAGCAGT...AGGTGCCCCAGGTGCCAGTGTGACTGGGCAGTCTCCCTTGGCTGCCCCGTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR TCA 90 bp CTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATAGACATCTGCACTGCCGCTGGGAGAGGGGGATaGGCGGCGCCGCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: LGVRWRRCVCVYIDICTAAGRGG*AAPPSS
Trigger: GGAAGATGGCGGCGCCGCTCATCCCCCTCTCCCAGC...GGCAGTGCAGATGTCTATATATACACACACACACCGTCGCCACCGTACTCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp AGGTCCCAGACCCTGCCCAGGACATCAAGAGGCAGCTTTGAGTTCATGAGGACTCTGCAGAGGGCGGTGTaGCCATCAGAGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RSQTLPRTSRGSFEFMRTLQRAV*PSEGCW
Trigger: CCAGCAGCCCTCTGATGGTCACACCGCCCTCTGCAG...AGTCCTCATGAACTCAAAGCTGCCTCTTGATGTCCTGGGCAGGGTCTGGGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000596037.5
CDS-3UTR TCA 90 bp TTTCCAGGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTTGGCTGTGTTTGCTTaGGGCTGTGCTTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: FPGLAAESAHPEQAPESRLAVFA*GCAWGT
Trigger: TGTCCCCCAAGCACAGCCTCAAGCAAACACAGCCAA...CCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGACCTGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp GCCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTTGGACTCGCCCAGCCTaGATGCTCTGCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ARGRLWKPPHYESTRKESWTRPA*MLCSSW
Trigger: CCAGCTGGAGCAGAGCATTCAGGCTGGGCGAGTCCA...ACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp CAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAAGCCTTCAGCACTATTaGAGGACCCACTTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: QKSQGSCKRKGVGWPGGGSLQHY*RTHFRR
Trigger: CCTTCGGAAGTGGGTCCTTCAATAGTGCTGAAGGCT...TCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp CAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAAGCCTTCAGCACTATTaGAGGACCCACTTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: QPRVAGMDRGPRESLRNQSLQHY*RTHFRR
Trigger: CCTTCGGAAGTGGGTCCTTCAATAGTGCTGAAGGCT...TTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR TCA 90 bp TCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCCTTCAGCACTATTaGAGGACCCACTTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: SAPSGWNGSGASGKSAEPSLQHY*RTHFRR
Trigger: CCTTCGGAAGTGGGTCCTTCAATAGTGCTGAAGGCT...TGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR TCA 90 bp CAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGACTCAACTTACAGAGGTaGAGTCTGCAAAGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: QKSQGSCKRKGVGWPGGGLNLQR*SLQSPR
Trigger: CCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGAG...TCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp GAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGACTCAACTTACCTCAACTTACAGAGGTaGAGTCTGCAAAGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: EAASGREWGGPEAEDSTYLNLQR*SLQSPR
Trigger: CCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGAG...GTAAGTTGAGTCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp GGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAGAGCGGTTTCCAGTGGGAATCTaGTGGGAGAGGGGGATGAGC +
Preference number: 4 (lower is better)
Translates to: GASSPRLTAVCSSPEEERFPVGI*WERGMS
Trigger: GCTCATCCCCCTCTCCCAGCAGATTCCCACTGGAAA...CCGCTCTTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp AGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCTTCATGGCCACTCTGTaGACAGGCCACCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: RQKSQGSCKRKGVGWPGGFMATL*TGHQSQ
Trigger: CTGAGACTGGTGGCCTGTGCACAGAGTGGCCATGAA...GCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp GAGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGTTCATGGCCACTCTGTaGACAGGCCACCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: ETKIPGKLQAEGSGVARRFMATL*TGHQSQ
Trigger: CTGAGACTGGTGGCCTGTGCACAGAGTGGCCATGAA...CCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp ACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTAGCTCGGTACACCAAGTaGATGGCCACAGCGAACTCA +
Preference number: 4 (lower is better)
Translates to: TSPRVPVLGVRWRRCVCVARYTK*MATANS
Trigger: TGAGTTCGCTGTGGCCATGCACTTGGTGTACCGAGC...TACACACACACACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp CTGGGCGGTTTAGGCCGTGGAGGAGCAGGTTTCTTCGGAGGCAGAGCAGGAGTGGCTCGGTACACCAAGTaGATGGCCACAGCGAACTCA +
Preference number: 4 (lower is better)
Translates to: LGGLGRGGAGFFGGRAGVARYTK*MATANS
Trigger: TGAGTTCGCTGTGGCCATGCACTTGGTGTACCGAGC...CACTCCTGCTCTGCCTCCGAAGAAACCTGCTCCTCCACGGCCTAAACCGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR GCA 90 bp TCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAGAGCGGGAGGCAGCTCGGTACACCAAGTaGATGGCCACAGCGAACTCA +
Preference number: 4 (lower is better)
Translates to: SSPRLTAVCSSPEEEREAARYTK*MATANS
Trigger: TGAGTTCGCTGTGGCCATGCACTTGGTGTACCGAGC...TGCCTCCCGCTCTTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp CAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAACTGTTGGCTGTGTTTaGTTGAGGCTGTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: QPRVAGMDRGPRESLRNQTVGCV*LRLCLG
Trigger: CCCCAAGCACAGCCTCAAGCAAACACAGCCAACAGT...TTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp GGGGGCCAGACACAAGAGACAGATGAGCTCGCCAGCAGTGCCTTCCCAGCAGCCACTGTTGGCTGTGTTTaGTTGAGGCTGTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GGQTQETDELASSAFPAATVGCV*LRLCLG
Trigger: CCCCAAGCACAGCCTCAAGCAAACACAGCCAACAGT...GGCTGCTGGGAAGGCACTGCTGGCGAGCTCATCTGTCTCTTGTGTCTGGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp TGTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACAAATCGCATCTTGTCTaGCACGGGCACCACCCAGTT +
Preference number: 4 (lower is better)
Translates to: CQPRVAGMDRGPRESLRNKSHLV*HGHHPV
Trigger: AACTGGGTGGTGCCCGTGGCAGACAAGATGCGATTT...GTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp GAGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGTGGGTGAGGCCCGAGTaGATGAAGATCTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: ETKIPGKLQAEGSGVARRWVRPE*MKISFT
Trigger: GGTGAAGGAGATCTTCATGCACTCGGGCCTCACCCA...CCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp ATCTGCACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGACGCGAATTGGTCTTTaGTTAACTTCCCCGTTTGCC +
Preference number: 4 (lower is better)
Translates to: ICTAPSLEPARALSRLHTTRIGL*LTSPFA
Trigger: GGCAAACGGGGAAGTTAAGCAAAGACCAATTCGCGT...CGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGCAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp CAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGACGAGCTCCTGCAAACTaGTTGTTTCCCGGTCTAGGT +
Preference number: 4 (lower is better)
Translates to: QKSQGSCKRKGVGWPGGGRAPAN*LFPGLG
Trigger: ACCTAGACCGGGAAACAAGCAGTTTGCAGGAGCTCG...TCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp CCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGCGAGCTCCTGCAAACTaGTTGTTTCCCGGTCTAGGT +
Preference number: 4 (lower is better)
Translates to: PEWLEWIGGLGKVCGTKLRAPAN*LFPGLG
Trigger: ACCTAGACCGGGAAACAAGCAGTTTGCAGGAGCTCG...CAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp AACAGATCTGGCGGGTGGGATGTTCTGCTGTCACACCAGGGGACCAGAGCCCCATCATCCTGGCACTTCTaGCGGACGTCGCTCAGCATG +
Preference number: 4 (lower is better)
Translates to: NRSGGWDVLLSHQGTRAPSSWHF*RTSLSM
Trigger: CATGCTGAGCGACGTCCGGCAGAAGTGCCAGGATGA...TGGGGCTCTGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGCCAGATCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp TTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAGAGCGGGAGGCTGGGTTTCCTCCTGCTaGAATCGGTTCAGCTCCGAC +
Preference number: 4 (lower is better)
Translates to: FLSSTDRCVFVPRGRAGGWVSSC*NRFSSD
Trigger: GTCGGAGCTGAACCGATTGCAGCAGGAGGAAACCCA...GCCTCCCGCTCTTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp GAGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGTGGGTTTCCTCCTGCTaGAATCGGTTCAGCTCCGAC +
Preference number: 4 (lower is better)
Translates to: ETKIPGKLQAEGSGVARRWVSSC*NRFSSD
Trigger: GTCGGAGCTGAACCGATTGCAGCAGGAGGAAACCCA...CCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp AGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCAGCTGGGTTTCCTCCTaGTGCAATCGGTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RQKSQGSCKRKGVGWPGGSWVSS*CNRFSS
Trigger: GGAGCTGAACCGATTGCAGCAGGAGGAAACCCAGCT...GCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp GCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAAGCTGGGTTTCCTCCTaGTGCAATCGGTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ALGASSPRLTAVCSSPEESWVSS*CNRFSS
Trigger: GGAGCTGAACCGATTGCAGCAGGAGGAAACCCAGCT...TTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp TCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCATCCTGGCGGCTTTCATaGAGCTGGGAAAGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: SAPSGWNGSGASGKSAEPSWRLS*SWESLL
Trigger: GAGCAAACTTTCCCAGCTGCATGAAAGCCGCCAGGA...TGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp CCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGTCCTGGCGGCTTTCATaGAGCTGGGAAAGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: PSGWNGSGASGKSAEPSWSWRLS*SWESLL
Trigger: GAGCAAACTTTCCCAGCTGCATGAAAGCCGCCAGGA...CCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp AGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCTACAGAGGTGAAGTCTaGAAAGCCCGAGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: RQKSQGSCKRKGVGWPGGYRGEV*KARGRG
Trigger: GCCTCTGCCTCGGGCTTTGCAGACTTCACCTCTGTA...GCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp GTGAAGTCTGCAAAGCCCGAGGCAGAGGCCTTAGAAGGTTTAGCTGCAGAGGAGTCTGGAACCCGCCCGTaGCCTGTCCCGCCTACACAC +
Preference number: 4 (lower is better)
Translates to: VKSAKPEAEALEGLAAEESGTRP*PVPPTH
Trigger: GTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGA...CTCCTCTGCAGCTAAACCTTCTAAGGCCTCTGCCTCGGGCTTTGCAGACTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602022.5
CDS-3UTR GCA 90 bp AACAGATCTGGCGGGTGGGATGTTCTGCTGTCACACCAGGGGACCAGAGCCCCACCCAGGGGACGCGTGTaGTTCCCCATAAATCCTTGG +
Preference number: 4 (lower is better)
Translates to: NRSGGWDVLLSHQGTRAPPRGRV*FPINPW
Trigger: CCAAGGATTTATGGGGAAGCACACGCGTCCCCTGGG...TGGGGCTCTGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGCCAGATCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp TTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCTGGGGCGCTGCTTGCGAAAGAGGGAGGCGGTaGACCCAGCGGGGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: FRRGQFLLERATPWGAACERGRR*TQRGPD
Trigger: GTCTGGCCCCCGCTGGGTGCACCGCCTCCCTCTTTC...GCAAGCAGCGCCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp TTCTGTGATCACAAGTTGCGACCGCTGCCAACCCCAAGATGCTCAGAGACTCATCCCGAGGGGGCCTCATaGCTGGGGCACGCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: FCDHKLRPLPTPRCSETHPEGAS*LGHASS
Trigger: GGAAGACGCGTGCCCCAGGCATGAGGCCCCCTCGGG...ATGAGTCTCTGAGCATCTTGGGGTTGGCAGCGGTCGCAACTTGTGATCACAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR GCA 90 bp AGTCCCAAACCGTGTCACAGCGTGGCATATGAGGGATGGAGGCCTTCTCCGTGTAGAAGTGGGATCTGCTaGGCCGCCAGGGCACGCACA +
Preference number: 4 (lower is better)
Translates to: SPKPCHSVAYEGWRPSPCRSGIC*AARART
Trigger: TGTGCGTGCCCTGGCGGCGCAGCAGATCCCACTTCT...ACACGGAGAAGGCCTCCATCCCTCATATGCCACGCTGTGACACGGTTTGGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CCA 90 bp AAGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCACCAGTGGGAATCTGCTaGGAGAGGGGGATGAGCGGC +
Preference number: 4 (lower is better)
Translates to: KGFPRRCDLSRSCSRVCSPVGIC*ERGMSG
Trigger: GCCGCTCATCCCCCTCTCCCAGCAGATTCCCACTGG...TGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp AGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTCAAGGTAACTTCATaGCCACTCTGTGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: SPEWLEWIGGLGKVCGTKLKVTS*PLCAQA
Trigger: GGCCTGTGCACAGAGTGGCCATGAAGTTACCTTGAG...CTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp CAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAACTCAAGGTAACTTCATaGCCACTCTGTGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: QPRVAGMDRGPRESLRNQLKVTS*PLCAQA
Trigger: GGCCTGTGCACAGAGTGGCCATGAAGTTACCTTGAG...TTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp CCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGCTCAAGGTAACTTCATaGCCACTCTGTGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: PSGWNGSGASGKSAEPSWLKVTS*PLCAQA
Trigger: GGCCTGTGCACAGAGTGGCCATGAAGTTACCTTGAG...CCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp GGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGCTCAAGGTAACTTCATaGCCACTCTGTGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: GLAAESAHPEQAPESRSLLKVTS*PLCAQA
Trigger: GGCCTGTGCACAGAGTGGCCATGAAGTTACCTTGAG...CAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp CTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGCCCTCGGTGAAATTTAGGCGGTaGCATGCTCAAATTCAGATT +
Preference number: 4 (lower is better)
Translates to: LPPLWNPPVPCPAYTRPSVKFRR*HAQIQI
Trigger: AATCTGAATTTGAGCATGCCACCGCCTAAATTTCAC...CGAGGGCCGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp CTTCTCCAGGGCTCGGTACACCAAGTGCATGGCCACAGCGAACTCATCTCGATCTGCCGTGGGACGGCGTaGAGCGGAGGCTGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: LLQGSVHQVHGHSELISICRGTA*SGGCLL
Trigger: CAAAAGACAGCCTCCGCTCCACGCCGTCCCACGGCA...GATCGAGATGAGTTCGCTGTGGCCATGCACTTGGTGTACCGAGCCCTGGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000593760.5
CDS-3UTR CCA 90 bp TCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCACCCTGAATGCCGTGGGACGGCGTaGAGCGGAGGCTGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: SPGDVTFPGLAAESAHPECRGTA*SGGCLL
Trigger: CAAAAGACAGCCTCCGCTCCACGCCGTCCCACGGCA...TTCAGGGTGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp GCCTCTGTAAGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGAGCTTGGCCTTCTGCTaGTCCATCTCGTCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: ASVRASPGDVTFPGLAAESLAFC*SISSRR
Trigger: CCGCCTGGACGAGATGGACCAGCAGAAGGCCAAGCT...CTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCTTACAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp GAGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGGCATGTCTCGGAGCTTaGCCTTCTGCTGGTCCATCT +
Preference number: 4 (lower is better)
Translates to: ETKIPGKLQAEGSGVARRACLGA*PSAGPS
Trigger: AGATGGACCAGCAGAAGGCCAAGCTCCGAGACATGC...CCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp AGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGCATGTCTCGGAGCTTaGCCTTCTGCTGGTCCATCT +
Preference number: 4 (lower is better)
Translates to: RQKSQGSCKRKGVGWPGGACLGA*PSAGPS
Trigger: AGATGGACCAGCAGAAGGCCAAGCTCCGAGACATGC...GCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp CCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGGTTCAGCTCCGACTTaGCTCGGTTCAGATCGTCTT +
Preference number: 4 (lower is better)
Translates to: PEWLEWIGGLGKVCGTKLGSAPT*LGSDRL
Trigger: AAGACGATCTGAACCGAGCCAAGTCGGAGCTGAACC...CAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp CAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGACGGCTTTCATGCAGCTaGGAAAGTTTGCTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: QKSQGSCKRKGVGWPGGGRLSCS*ESLLLA
Trigger: GGCAAGGAGCAAACTTTCCCAGCTGCATGAAAGCCG...TCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp CAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAACGGCTTTCATGCAGCTaGGAAAGTTTGCTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: QPRVAGMDRGPRESLRNQRLSCS*ESLLLA
Trigger: GGCAAGGAGCAAACTTTCCCAGCTGCATGAAAGCCG...TTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp CGGTACACCAAGTGCATGGCCACAGCGAACTCATCTCGATCCAAGTGCCCATCCCTCCTGTGGGCCTCCTaGCGGCTTTCATGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RYTKCMATANSSRSKCPSLLWAS*RLSCSW
Trigger: CCAGCTGCATGAAAGCCGCCAGGAGGCCCACAGGAG...GGATGGGCACTTGGATCGAGATGAGTTCGCTGTGGCCATGCACTTGGTGTACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CCA 90 bp AGTCCCAAACCGTGTCACAGCGTGGCATATGAGGGATGGAGGCCTTCTCCGTGTCTCCTGTGGGCCTCCTaGCGGCTTTCATGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SPKPCHSVAYEGWRPSPCLLWAS*RLSCSW
Trigger: CCAGCTGCATGAAAGCCGCCAGGAGGCCCACAGGAG...ACACGGAGAAGGCCTCCATCCCTCATATGCCACGCTGTGACACGGTTTGGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CCA 90 bp CCGGCACCGCCAATAGGAAGTGAGACCGGCTCTGAAATCACAGCTGCATGTGTGGTCAGGCTGGCACCATaGGCTCCATCGAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: PAPPIGSETGSEITAACVVRLAP*APSSTW
Trigger: CCAGGTGCTCGATGGAGCCCATGGTGCCAGCCTGAC...CACACATGCAGCTGTGATTTCAGAGCCGGTCTCACTTCCTATTGGCGGTGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CCA 90 bp GCCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTGTCAGGCTGGCACCATaGGCTCCATCGAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: ARGRLWKPPHYESTRKESVRLAP*APSSTW
Trigger: CCAGGTGCTCGATGGAGCCCATGGTGCCAGCCTGAC...ACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp TGTAAGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCCCAGGTCGGTCAGGCTaGCACCATGGGCTCCATCGA +
Preference number: 4 (lower is better)
Translates to: CKGFPRRCDLSRSCSRVCPGRSG*HHGLHR
Trigger: TCGATGGAGCCCATGGTGCCAGCCTGACCGACCTGG...GCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCTTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp AAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGCAAAGGGGTCATTCTaGAACGGGTCGCCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: KNPREAASGREWGGPEAEAKGSF*NGSPLK
Trigger: CTTCAAAGGCGACCCGTTCCAGAATGACCCCTTTGC...CTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp CCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGCAAAGGGGTCATTCTaGAACGGGTCGCCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: PRVAGMDRGPRESLRNQAAKGSF*NGSPLK
Trigger: CTTCAAAGGCGACCCGTTCCAGAATGACCCCTTTGC...AGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp CCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGGCAAAGGGGTCATTCTaGAACGGGTCGCCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: PSGWNGSGASGKSAEPSWAKGSF*NGSPLK
Trigger: CTTCAAAGGCGACCCGTTCCAGAATGACCCCTTTGC...CCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp CTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGCCCTCGTGGATCCGAGGTAAATaGGTCATTCTTTGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LPPLWNPPVPCPAYTRPSWIRGK*VILCLF
Trigger: AAACAGACAAAGAATGACCCATTTACCTCGGATCCA...CGAGGGCCGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp TGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATAGACATCTGCACTGCCCCGCACTGCCCCCTCTCTaGAACCCGCCCGTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: WSTVATVCVCIYRHLHCPALPPL*NPPVPC
Trigger: ACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGC...GGGGCAGTGCAGATGTCTATATATACACACACACACCGTCGCCACCGTACTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CCA 90 bp GAACACGGGGCAGCCAAGGGAGACTGCCCAGTCACACTGGCACCTGGGGCACCTCATTCCTTGGACATCTaGCTGAAGTCGGCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: EHGAAKGDCPVTLAPGAPHSLDI*LKSAKP
Trigger: AGGCTTTGCCGACTTCAGCCAGATGTCCAAGGAATG...AGGTGCCCCAGGTGCCAGTGTGACTGGGCAGTCTCCCTTGGCTGCCCCGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR TCA 90 bp AGAGGTGAAGTCTGCAAAGCCCGAGGCAGAGGCCTTAGAAGGTTTAGCTGCAGACTGCAGAGGGCGGTGTaGCCATCAGAGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RGEVCKARGRGLRRFSCRLQRAV*PSEGCW
Trigger: CCAGCAGCCCTCTGATGGTCACACCGCCCTCTGCAG...TCTGCAGCTAAACCTTCTAAGGCCTCTGCCTCGGGCTTTGCAGACTTCACCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR TCA 90 bp GCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCCAGAGAGCAAACCATTaGTGGGCAAGAGGCTTTCAA +
Preference number: 4 (lower is better)
Translates to: APSGWNGSGASGKSAEPSQRANH*WARGFQ
Trigger: TTGAAAGCCTCTTGCCCATCAATGGTTTGCTCTCTG...GCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR TCA 90 bp GGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGACTCAACTTCAGAGAGCAAACCATTaGTGGGCAAGAGGCTTTCAA +
Preference number: 4 (lower is better)
Translates to: GKLQAEGSGVARRRRTQLQRANH*WARGFQ
Trigger: TTGAAAGCCTCTTGCCCATCAATGGTTTGCTCTCTG...AAGTTGAGTCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp CCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATCCTTGTCAATGTCACTaGGGTCCCAGACCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PPSPGPWSTVATVCVCIYPCQCH*GPRPCP
Trigger: TGGGCAGGGTCTGGGACCTCAGTGACATTGACAAGG...ATATATACACACACACACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp AGTGGGGTGGCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCCTTGTCAATGTCACTaGGGTCCCAGACCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SGVARRRRTQLTEVKSAKPCQCH*GPRPCP
Trigger: TGGGCAGGGTCTGGGACCTCAGTGACATTGACAAGG...CTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGCCACCCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp GCACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGCCCTTACTGACCTTCTGCTaGATGAAATACATAGCTAAC +
Preference number: 4 (lower is better)
Translates to: ALPPLWNPPVPCPAYTRPLLTFC*MKYIAN
Trigger: GTTAGCTATGTATTTCATTCAGCAGAAGGTCAGTAA...GGGCCGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp AGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGACTCAACTAACTGGGCAATCTCTTaGCTGATGTCATCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: REAASGREWGGPEAEDSTNWAIS*LMSSSS
Trigger: GGAGCTTGATGACATCAGTCAAGAGATTGCCCAGTT...AGTTGAGTCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp GTGAAGTCTGCAAAGCCCGAGGCAGAGGCCTTAGAAGGTTTAGCTGCAGAGGAGTGGACTCGCCCAGCCTaGATGCTCTGCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VKSAKPEAEALEGLAAEEWTRPA*MLCSSW
Trigger: CCAGCTGGAGCAGAGCATTCAGGCTGGGCGAGTCCA...CTCCTCTGCAGCTAAACCTTCTAAGGCCTCTGCCTCGGGCTTTGCAGACTTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR TCA 90 bp CACCAAGTGCATGGCCACAGCGAACTCATCTCGATCCAAGTGCCCATCCTTGTCTGGACTCGCCCAGCCTaGATGCTCTGCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: HQVHGHSELISIQVPILVWTRPA*MLCSSW
Trigger: CCAGCTGGAGCAGAGCATTCAGGCTGGGCGAGTCCA...GACAAGGATGGGCACTTGGATCGAGATGAGTTCGCTGTGGCCATGCACTTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR TCA 90 bp ACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGCCCTCACAAGGCTTTATTTTTaGAAGGATCATCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: TAPSLEPARALSRLHTALTRLYF*KDHPWL
Trigger: GAGCCATGGATGATCCTTTCAAAAATAAAGCCTTGT...GAGGGCCGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp GCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAAGCCTTCAGCACTATTaGAGGACCCACTTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: ALGASSPRLTAVCSSPEESLQHY*RTHFRR
Trigger: CCTTCGGAAGTGGGTCCTTCAATAGTGCTGAAGGCT...TTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp ACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGACGGTGTGTTTTAAAGGGGTCATCTaGGAATCCTGCCCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: TLNKPPSPGPWSTVATVCFKGVI*ESCPSQ
Trigger: TTGGGAGGGGCAGGATTCTCAGATGACCCCTTTAAA...ACACACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000455140.7
CDS-3UTR TCA 90 bp CTGGAACCAACGTTGGCCATGAACAGATCTGGCGGGTGGGATGTTCTGCTGTCACCCCTGCCCCAGGCCTaGTCACAACTCCAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: LEPTLAMNRSGGWDVLLSPLPQA*SQLQGH
Trigger: ATGACCCTGGAGTTGTGATCAGGCCTGGGGCAGGGG...TGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCCAACGTTGGTTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp GGCCATGAACAGATCTGGCGGGTGGGATGTTCTGCTGTCACACCAGGGGACCAGGAGGAAGCTGTTCCCTaGACGAAGACTGAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: GHEQIWRVGCSAVTPGDQEEAVP*TKTEQD
Trigger: GTCCTGCTCAGTCTTCGTTCAGGGAACAGCTTCCTC...CTGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp AAGGAAGAGGAGTCCACTTGCGACAACCAGAAACGACCAGGACGCCTGAGGGACATCTGCTCCACCAGCTaGGTGAACACGGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: KEEESTCDNQKRPGRLRDICSTS*VNTGQP
Trigger: TGGCTGCCCCGTGTTCACTCAGCTGGTGGAGCAGAT...GTCCCTCAGGCGTCCTGGTCGTTTCTGGTTGTCGCAAGTGGACTCCTCTTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR TCA 90 bp TGTCCTGGCCCGGCACCGCCAATAGGAAGTGAGACCGGCTCTGAAATCACAGCTTCACAGCGTGGCATATaGGGGATGGAGGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CPGPAPPIGSETGSEITASQRGI*GMEAFS
Trigger: GGAGAAGGCCTCCATCCCTCATATGCCACGCTGTGA...AGCTGTGATTTCAGAGCCGGTCTCACTTCCTATTGGCGGTGCCGGGCCAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR GCA 90 bp AGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGACTCAACTGGCCACCAGTCTCAGTaGAACATAGAAACCCTGTTT +
Preference number: 4 (lower is better)
Translates to: REAASGREWGGPEAEDSTGHQSQ*NIETLF
Trigger: AAACAGGGTTTCTATGTTGCACTGAGACTGGTGGCC...AGTTGAGTCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535753.6
CDS-3UTR GCA 90 bp AGCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAAATCGCATCTTGTCTaGCACGGGCACCACCCAGTT +
Preference number: 4 (lower is better)
Translates to: SPGCFLSSTDRCVFVPRGKSHLV*HGHHPV
Trigger: AACTGGGTGGTGCCCGTGGCAGACAAGATGCGATTT...TCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp AAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGAACGCGAATTGGTCTTTaGTTAACTTCCCCGTTTGCC +
Preference number: 4 (lower is better)
Translates to: KSQGSCKRKGVGWPGGGGTRIGL*LTSPFA
Trigger: GGCAAACGGGGAAGTTAAGCAAAGACCAATTCGCGT...TCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp AGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCCGAGCTCCTGCAAACTaGTTGTTTCCCGGTCTAGGT +
Preference number: 4 (lower is better)
Translates to: RQKSQGSCKRKGVGWPGGRAPAN*LFPGLG
Trigger: ACCTAGACCGGGAAACAAGCAGTTTGCAGGAGCTCG...GCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp AAGCCCGAGGCAGAGGCCTTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATGGGCGGAGCTTGGCCTTCTaGTGGTCCATCTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: KPEAEALEGLAAEEGTNGRSLAF*WSISSR
Trigger: CCTGGACGAGATGGACCAGCAGAAGGCCAAGCTCCG...CCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAAGGCCTCTGCCTCGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR GCA 90 bp TGTAAGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCCGGAGCTTGGCCTTCTaGTGGTCCATCTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: CKGFPRRCDLSRSCSRVCRSLAF*WSISSR
Trigger: CCTGGACGAGATGGACCAGCAGAAGGCCAAGCTCCG...GCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCTTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp AGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCTCCTGGCGGCTTTCATaGAGCTGGGAAAGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: RQKSQGSCKRKGVGWPGGSWRLS*SWESLL
Trigger: GAGCAAACTTTCCCAGCTGCATGAAAGCCGCCAGGA...GCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp GTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCTGGAAAGGATCCGGATaGAACTCTTGCGTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: VSPEWLEWIGGLGKVCGTWKGSG*NSCVLL
Trigger: CAACAACACGCAAGAGTTGCATCCGGATCCTTTCCA...GGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp TTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAGAGCGGGAGGCAAAAGAGGTGAAGTCTaGAAAGCCCGAGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: FLSSTDRCVFVPRGRAGGKRGEV*KARGRG
Trigger: GCCTCTGCCTCGGGCTTTGCAGACTTCACCTCTTTT...GCCTCCCGCTCTTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp CGGAACAGCACCAAGACGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCCAGCATGGCCACCTGTaGCAGGCTGCAAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: RNSTKTKWETTCPQVRGCQHGHL*QAARPG
Trigger: ACCAGGCCTTGCAGCCTGGCACAGGTGGCCATGCTG...GCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCGTCTTGGTGCTGTTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp CCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTACCCCAGGTTCGAGGCTaGAGGGGCAGACTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: PGGGYGNHLITSPREKRVPQVRG*RGRLWC
Trigger: ACACCAGAGTCTGCCCCTGCAGCCTCGAACCTGGGG...TACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp CCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGACAACGAATTTCCAGTaGGAATCTGCTGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PEWLEWIGGLGKVCGTKLTTNFQ*ESAGRG
Trigger: CCCTCTCCCAGCAGATTCCCACTGGAAATTCGTTGT...CAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp CAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGACACCCAGTTCACTGTTaGCTGTGTTTGCTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: QKSQGSCKRKGVGWPGGGHPVHC*LCLLEA
Trigger: AGCCTCAAGCAAACACAGCCAACAGTGAACTGGGTG...TCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp CGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGCCACCCAGTTCACTGTTaGCTGTGTTTGCTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: RVAGMDRGPRESLRNQAGHPVHC*LCLLEA
Trigger: AGCCTCAAGCAAACACAGCCAACAGTGAACTGGGTG...GCCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp CGGTACACCAAGTGCATGGCCACAGCGAACTCATCTCGATCCAAGTGCCCATCCAGCTTGGCCTTCTGCTaGTCCATCTCGTCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: RYTKCMATANSSRSKCPSSLAFC*SISSRR
Trigger: CCGCCTGGACGAGATGGACCAGCAGAAGGCCAAGCT...GGATGGGCACTTGGATCGAGATGAGTTCGCTGTGGCCATGCACTTGGTGTACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CCA 90 bp TTTCCAGGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGCGGCTTTCATGCAGCTaGGAAAGTTTGCTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: FPGLAAESAHPEQAPESRRLSCS*ESLLLA
Trigger: GGCAAGGAGCAAACTTTCCCAGCTGCATGAAAGCCG...CCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGACCTGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp CCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATGCTCCATCGAGCACCTaGTCATACTGCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: PPSPGPWSTVATVCVCIYAPSST*SYCSRL
Trigger: GAGCCTGGAGCAGTATGACCAGGTGCTCGATGGAGC...ATATATACACACACACACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp CTGGAACCAACGTTGGCCATGAACAGATCTGGCGGGTGGGATGTTCTGCTGTCAGTCAGGCTGGCACCATaGGCTCCATCGAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: LEPTLAMNRSGGWDVLLSVRLAP*APSSTW
Trigger: CCAGGTGCTCGATGGAGCCCATGGTGCCAGCCTGAC...TGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCCAACGTTGGTTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp AGGCGGGGAAGCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCAAGGGGTCTTCTGTCTaGAAAGGATCCGGATGCAAC +
Preference number: 4 (lower is better)
Translates to: RRGSPGCFLSSTDRCVFVKGSSV*KGSGCN
Trigger: GTTGCATCCGGATCCTTTCCAGACAGAAGACCCCTT...GACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGCTTCCCCGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp CCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGAAGGGGTCTTCTGTCTaGAAAGGATCCGGATGCAAC +
Preference number: 4 (lower is better)
Translates to: PSGWNGSGASGKSAEPSWKGSSV*KGSGCN
Trigger: GTTGCATCCGGATCCTTTCCAGACAGAAGACCCCTT...CCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp AGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGAAGGGGTCTTCTGTCTaGAAAGGATCCGGATGCAAC +
Preference number: 4 (lower is better)
Translates to: SPEWLEWIGGLGKVCGTKKGSSV*KGSGCN
Trigger: GTTGCATCCGGATCCTTTCCAGACAGAAGACCCCTT...CTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp CAGGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTAAGGGGTCTTCTGTCTaGAAAGGATCCGGATGCAAC +
Preference number: 4 (lower is better)
Translates to: QVLQPSLLTLNKPPSPGPKGSSV*KGSGCN
Trigger: GTTGCATCCGGATCCTTTCCAGACAGAAGACCCCTT...AGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp CACACCCTGCCTCGGTCAGAAGTGGGATCTGCTGCGCCGCCAGGGCACGCACACGTCAGCTCCTTTAAATaGGTCAGATTTGAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: HTLPRSEVGSAAPPGHAHVSSFK*VRFEGV
Trigger: GACCCCTTCAAATCTGACCCATTTAAAGGAGCTGAC...GTGTGCGTGCCCTGGCGGCGCAGCAGATCCCACTTCTGACCGAGGCAGGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CCA 90 bp GGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAGAGCGGGCAAAGGGGTCATTCTaGAACGGGTCGCCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: GASSPRLTAVCSSPEEERAKGSF*NGSPLK
Trigger: CTTCAAAGGCGACCCGTTCCAGAATGACCCCTTTGC...CCGCTCTTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp CCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGCAGAGCCACGGAATaGGTCACTTTCTTTGAAAGG +
Preference number: 4 (lower is better)
Translates to: PRVAGMDRGPRESLRNQAGRATE*VTFFER
Trigger: CCTTTCAAAGAAAGTGACCCATTCCGTGGCTCTGCC...AGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp CACCCTGCCTCGGTCAGAAGTGGGATCTGCTGCGCCGCCAGGGCACGCACACACAGGGTTTTTCGTGAATaGATCCGAGGTAAATGGGTC +
Preference number: 4 (lower is better)
Translates to: HPASVRSGICCAARARTHRVFRE*IRGKWV
Trigger: GACCCATTTACCTCGGATCCATTCACGAAAAACCCT...GTGTGTGCGTGCCCTGGCGGCGCAGCAGATCCCACTTCTGACCGAGGCAGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CCA 90 bp AGAGGTGAAGTCTGCAAAGCCCGAGGCAGAGGCCTTAGAAGGTTTAGCTGCAGAGCTGTCAGCCCCGAGTaGCTGGAATGGATCGGGGGC +
Preference number: 4 (lower is better)
Translates to: RGEVCKARGRGLRRFSCRAVSPE*LEWIGG
Trigger: GCCCCCGATCCATTCCAGCCACTCGGGGCTGACAGC...TCTGCAGCTAAACCTTCTAAGGCCTCTGCCTCGGGCTTTGCAGACTTCACCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR CCA 90 bp AAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGAACCCCTTTTTACTTTaGAACGGGTCGCCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: KNPREAASGREWGGPEAENPFLL*NGSPLS
Trigger: TGACAGCGGCGACCCGTTCCAAAGTAAAAAGGGGTT...CTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp TCAACTTACAGAGGTGAAGTCTGCAAAGCCCGAGGCAGAGGCCTTAGAAGGTTTCGGAAGGGAGTGGGGTaGCCCGGAGGCGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: STYRGEVCKARGRGLRRFRKGVG*PGGGGL
Trigger: GAGTCCTCCGCCTCCGGGCCACCCCACTCCCTTCCG...AAACCTTCTAAGGCCTCTGCCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp CGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCAGGGGCAGACTCTGGTCCAGGCTGCAAGGCCTaGTGTGAACGCGCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: RNGKLHVPRFEAAGADSGPGCKA*CERAKW
Trigger: CCACTTTGCGCGTTCACACCAGGCCTTGCAGCCTGG...ACCAGAGTCTGCCCCTGCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp AGCCTCCCAAAGGAAGAGGAGTCCACTTGCGACAACCAGAAACGACCAGGACGCCCTCTTCCCGCAGCGTaGATAATGCCTGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SLPKEEESTCDNQKRPGRPLPAA*IMPGPL
Trigger: CAGAGGCCCAGGCATTATCCACGCTGCGGGAAGAGG...GCGTCCTGGTCGTTTCTGGTTGTCGCAAGTGGACTCCTCTTCCTTTGGGAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR TCA 90 bp TTTTTACTTTGGAACGGGTCGCCGCTGTCAGCCCCGAGTGGCTGGAATGGATCGGGGCTGCTGGTGTCGTaGAATTTAGGCGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: FLLWNGSPLSAPSGWNGSGLLVS*NLGGGM
Trigger: CATGCCACCGCCTAAATTTCACGACACCAGCAGCCC...CGATCCATTCCAGCCACTCGGGGCTGACAGCGGCGACCCGTTCCAAAGTAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR TCA 90 bp CCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGCAGAGAGCAAACCATTaGTGGGCAAGAGGCTTTCAA +
Preference number: 4 (lower is better)
Translates to: PSGWNGSGASGKSAEPSWQRANH*WARGFQ
Trigger: TTGAAAGCCTCTTGCCCATCAATGGTTTGCTCTCTG...CCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR TCA 90 bp AGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGCAGAGAGCAAACCATTaGTGGGCAAGAGGCTTTCAA +
Preference number: 4 (lower is better)
Translates to: SLLTLNKPPSPGPWSTVAQRANH*WARGFQ
Trigger: TTGAAAGCCTCTTGCCCATCAATGGTTTGCTCTCTG...CGCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp TGTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACATCAAGAGGCAGCTTTaGGTTCATGAGGACTGGCTT +
Preference number: 4 (lower is better)
Translates to: CQPRVAGMDRGPRESLRNIKRQL*VHEDWL
Trigger: AAGCCAGTCCTCATGAACTCAAAGCTGCCTCTTGAT...GTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR TCA 90 bp CAGGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTATCAAGAGGCAGCTTTaGGTTCATGAGGACTGGCTT +
Preference number: 4 (lower is better)
Translates to: QVLQPSLLTLNKPPSPGPIKRQL*VHEDWL
Trigger: AAGCCAGTCCTCATGAACTCAAAGCTGCCTCTTGAT...AGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp AGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGGGGCAATCTCTTGACTaGTGTCATCAAGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: SLLTLNKPPSPGPWSTVAGQSLD*CHQAPS
Trigger: TGAAGGAGCTTGATGACATCAGTCAAGAGATTGCCC...CGCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp CCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGGGGCAATCTCTTGACTaGTGTCATCAAGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: PSGWNGSGASGKSAEPSWGQSLD*CHQAPS
Trigger: TGAAGGAGCTTGATGACATCAGTCAAGAGATTGCCC...CCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR TCA 90 bp ACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGACGGTGTGTGGGCAATCTCTTGACTaGTGTCATCAAGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: TLNKPPSPGPWSTVATVCGQSLD*CHQAPS
Trigger: TGAAGGAGCTTGATGACATCAGTCAAGAGATTGCCC...ACACACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp CCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTAACTGGGCAATCTCTTaGCTGATGTCATCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: PRVAGMDRGPRESLRNQANWAIS*LMSSSS
Trigger: GGAGCTTGATGACATCAGTCAAGAGATTGCCCAGTT...AGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR TCA 90 bp TGTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACAGTGATGAGATCATCTaGGTCTCATCCTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: CQPRVAGMDRGPRESLRNSDEII*VSSWHF
Trigger: GAAGTGCCAGGATGAGACTCAGATGATCTCATCACT...GTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR TCA 90 bp GCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTCCAAATGGATCTGTTaGAGTTGTCTGCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: APSGWNGSGASGKSAEPSSKWIC*SCLLFC
Trigger: GCAGAACAGCAGACAACTTCAACAGATCCATTTGGA...GCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR TCA 90 bp ACACACCCTGCCTCGGTCAGAAGTGGGATCTGCTGCGCCGCCAGGGCACGCACATCCAAATGGATCTGTTaGAGTTGTCTGCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: THPASVRSGICCAARARTSKWIC*SCLLFC
Trigger: GCAGAACAGCAGACAACTTCAACAGATCCATTTGGA...TGTGCGTGCCCTGGCGGCGCAGCAGATCCCACTTCTGACCGAGGCAGGGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR TCA 90 bp CCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTATGGGTCACTTTCTTTaGAAGGGTCCCCTCCAAATG +
Preference number: 4 (lower is better)
Translates to: PRVAGMDRGPRESLRNQAMGHFL*KGPLQM
Trigger: CATTTGGAGGGGACCCTTTCAAAGAAAGTGACCCAT...AGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR TCA 90 bp AGGCGGGGAAGCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCATGGGTCACTTTCTTTaGAAGGGTCCCCTCCAAATG +
Preference number: 4 (lower is better)
Translates to: RRGSPGCFLSSTDRCVFVMGHFL*KGPLQM
Trigger: CATTTGGAGGGGACCCTTTCAAAGAAAGTGACCCAT...GACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGCTTCCCCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp GCCTCTGTAAGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGGCTTGGACATCTGGCTaGAGTCGGCAAAGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: ASVRASPGDVTFPGLAAEAWTSG*SRQSLQ
Trigger: CTGAAGGCTTTGCCGACTTCAGCCAGATGTCCAAGC...CTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCTTACAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455140.7
CDS-3UTR TCA 90 bp CTGGAACCAACGTTGGCCATGAACAGATCTGGCGGGTGGGATGTTCTGCTGTCAGTAGGAGCCGGGTTGTaGGACGGAAACACACACGCC +
Preference number: 4 (lower is better)
Translates to: LEPTLAMNRSGGWDVLLSVGAGL*DGNTHA
Trigger: GGCGTGTGTGTTTCCGTCTCACAACCCGGCTCCTAC...TGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCCAACGTTGGTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp ACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGACGGTGTGTGGCCACCAGTCTCAGTaGAACATAGAAACCCTGTTT +
Preference number: 4 (lower is better)
Translates to: TLNKPPSPGPWSTVATVCGHQSQ*NIETLF
Trigger: AAACAGGGTTTCTATGTTGCACTGAGACTGGTGGCC...ACACACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp CCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGCCACCAGTCTCAGTaGAACATAGAAACCCTGTTT +
Preference number: 4 (lower is better)
Translates to: PRVAGMDRGPRESLRNQAGHQSQ*NIETLF
Trigger: AAACAGGGTTTCTATGTTGCACTGAGACTGGTGGCC...AGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp CTGTCTTTGGAGTTGGGGGAATCACTGGCCACTTGCAAACTGCCACTTCACTGCAGCCCAGTGGGCCTCTaGAGAGGGCGGTGTGACCAT +
Preference number: 4 (lower is better)
Translates to: LSLELGESLATCKLPLHCSPVGL*RGRCDH
Trigger: ATGGTCACACCGCCCTCTGCAGAGGCCCACTGGGCT...GCAGTGAAGTGGCAGTTTGCAAGTGGCCAGTGATTCCCCCAACTCCAAAGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597937.5
CDS-3UTR GCA 90 bp AGTGGGGTGGCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGGCTCGGTACACCAAGTaGATGGCCACAGCGAACTCA +
Preference number: 4 (lower is better)
Translates to: SGVARRRRTQLTEVKSAKARYTK*MATANS
Trigger: TGAGTTCGCTGTGGCCATGCACTTGGTGTACCGAGC...CTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGCCACCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp AACAGATCTGGCGGGTGGGATGTTCTGCTGTCACACCAGGGGACCAGAGCCCCAACTGTTGGCTGTGTTTaGTTGAGGCTGTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: NRSGGWDVLLSHQGTRAPTVGCV*LRLCLG
Trigger: CCCCAAGCACAGCCTCAAGCAAACACAGCCAACAGT...TGGGGCTCTGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGCCAGATCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCCCGAGGCAAAATCGCATCTTGTCTaGCACGGGCACCACCCAGTT +
Preference number: 4 (lower is better)
Translates to: ARRRRTQLTEVKSAKPEAKSHLV*HGHHPV
Trigger: AACTGGGTGGTGCCCGTGGCAGACAAGATGCGATTT...TGCCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp CCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATTGGGTGAGGCCCGAGTaGATGAAGATCTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: PPSPGPWSTVATVCVCIYWVRPE*MKISFT
Trigger: GGTGAAGGAGATCTTCATGCACTCGGGCCTCACCCA...ATATATACACACACACACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp CCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTACGCGAATTGGTCTTTaGTTAACTTCCCCGTTTGCC +
Preference number: 4 (lower is better)
Translates to: PRVAGMDRGPRESLRNQATRIGL*LTSPFA
Trigger: GGCAAACGGGGAAGTTAAGCAAAGACCAATTCGCGT...AGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp GTAGCCATCCAGGTCCAGGTCGGTCTTCAGGAATATCTCATCAAATCGCATCTTTGTCCGGGCCGGGCGTaGCTCTCTCCGAAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: VAIQVQVGLQEYLIKSHLCPGRA*LSPKAG
Trigger: TCCCGCCTTCGGAGAGAGGCACGCCCGGCCCGGACA...AAGATGCGATTTGATGAGATATTCCTGAAGACCGACCTGGACCTGGATGGCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR GCA 90 bp GCAAAGCCCGAGGCAGAGGCCTTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATCGGAGCTTGGCCTTCTaGTGGTCCATCTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: AKPEAEALEGLAAEEGTNRSLAF*WSISSR
Trigger: CCTGGACGAGATGGACCAGCAGAAGGCCAAGCTCCG...ATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAAGGCCTCTGCCTCGGGCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR GCA 90 bp CGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCAGGGGCAGACTCTGGTTCATCCTGGCACTTCTaGCGGACGTCGCTCAGCATG +
Preference number: 4 (lower is better)
Translates to: RNGKLHVPRFEAAGADSGSSWHF*RTSLSM
Trigger: CATGCTGAGCGACGTCCGGCAGAAGTGCCAGGATGA...ACCAGAGTCTGCCCCTGCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp AAGCCCGAGGCAGAGGCCTTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATGGGTCATCCTGGCACTTCTaGCGGACGTCGCTCAGCATG +
Preference number: 4 (lower is better)
Translates to: KPEAEALEGLAAEEGTNGSSWHF*RTSLSM
Trigger: CATGCTGAGCGACGTCCGGCAGAAGTGCCAGGATGA...CCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAAGGCCTCTGCCTCGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR GCA 90 bp AGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGACTCAACTGGAAAGTTTGCTCCTTaGCTGGTTGATTTCGTCTTG +
Preference number: 4 (lower is better)
Translates to: REAASGREWGGPEAEDSTGKFAP*LVDFVL
Trigger: CAAGACGAAATCAACCAGGCAAGGAGCAAACTTTCC...AGTTGAGTCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp TGTAAGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCAAAACTGCCCCTCTCTaGCAGGGAGACGCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: CKGFPRRCDLSRSCSRVCKTAPL*QGDAFA
Trigger: AGCGAAGGCGTCTCCCTGGCAGAGAGGGGCAGTTTT...GCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCTTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp ATCTGCACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGTCCGGATGCAACTCTTaGGTGTTGTTGCTAAATAAC +
Preference number: 4 (lower is better)
Translates to: ICTAPSLEPARALSRLHTSGCNS*VLLLNN
Trigger: GTTATTTAGCAACAACACGCAAGAGTTGCATCCGGA...CGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGCAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp CCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTTGGAAAGGATCCGGATaGAACTCTTGCGTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: PRVAGMDRGPRESLRNQAWKGSG*NSCVLL
Trigger: CAACAACACGCAAGAGTTGCATCCGGATCCTTTCCA...AGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp ACATCTGCACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACAAGTTGTCTGCTGTTCTaGAAAGGGGTCATTCTGGAA +
Preference number: 4 (lower is better)
Translates to: TSALPPLWNPPVPCPAYTSCLLF*KGVILE
Trigger: TTCCAGAATGACCCCTTTGCAGAACAGCAGACAACT...TGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGCAGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp GTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAGTTGTCTGCTGTTCTaGAAAGGGGTCATTCTGGAA +
Preference number: 4 (lower is better)
Translates to: VSPEWLEWIGGLGKVCGTSCLLF*KGVILE
Trigger: TTCCAGAATGACCCCTTTGCAGAACAGCAGACAACT...GGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp AAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGATCTGTTGAAGTTGTCTaGTGTTCTGCAAAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: KSQGSCKRKGVGWPGGGGSVEVV*CSAKGS
Trigger: TGACCCCTTTGCAGAACAGCAGACAACTTCAACAGA...TCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp AACAGATCTGGCGGGTGGGATGTTCTGCTGTCACACCAGGGGACCAGAGCCCCACCCTGGGGCGCTGCTTaGCATTACTTCCTCATCTTT +
Preference number: 4 (lower is better)
Translates to: NRSGGWDVLLSHQGTRAPPWGAA*HYFLIF
Trigger: AAAGATGAGGAAGTAATGGCAAGCAGCGCCCCAGGG...TGGGGCTCTGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGCCAGATCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GGGGGCCAGACACAAGAGACAGATGAGCTCGCCAGCAGTGCCTTCCCAGCAGCCGTCTCAGGTAACCTTTaGCCTGCCCAAAAGATGAAC +
Preference number: 4 (lower is better)
Translates to: GGQTQETDELASSAFPAAVSGNL*PAQKMN
Trigger: GTTCATCTTTTGGGCAGGGCAAAGGTTACCTGAGAC...GGCTGCTGGGAAGGCACTGCTGGCGAGCTCATCTGTCTCTTGTGTCTGGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp AGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCACAACGAATTTCCAGTaGGAATCTGCTGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: RQKSQGSCKRKGVGWPGGTTNFQ*ESAGRG
Trigger: CCCTCTCCCAGCAGATTCCCACTGGAAATTCGTTGT...GCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp ACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTAACAACGAATTTCCAGTaGGAATCTGCTGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: TSPRVPVLGVRWRRCVCVTTNFQ*ESAGRG
Trigger: CCCTCTCCCAGCAGATTCCCACTGGAAATTCGTTGT...TACACACACACACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp TCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAGAGCGGGAGGCAACAACGAATTTCCAGTaGGAATCTGCTGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SSPRLTAVCSSPEEEREATTNFQ*ESAGRG
Trigger: CCCTCTCCCAGCAGATTCCCACTGGAAATTCGTTGT...TGCCTCCCGCTCTTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp AGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGGAACCCTTTACCTTCTaGATCGGCCAAGTCCCATAT +
Preference number: 4 (lower is better)
Translates to: SPEWLEWIGGLGKVCGTKEPFTF*IGQVPY
Trigger: ATATGGGACTTGGCCGATCCAGAAGGTAAAGGGTTC...CTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp TGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATAGACATCTGCACTGCCCCTGCCGTGGGACGGCGTaGAGCGGAGGCTGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: WSTVATVCVCIYRHLHCPCRGTA*SGGCLL
Trigger: CAAAAGACAGCCTCCGCTCCACGCCGTCCCACGGCA...GGGGCAGTGCAGATGTCTATATATACACACACACACCGTCGCCACCGTACTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp GGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGTGCCGTGGGACGGCGTaGAGCGGAGGCTGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: GGGYGNHLITSPREKRVWCRGTA*SGGCLL
Trigger: CAAAAGACAGCCTCCGCTCCACGCCGTCCCACGGCA...CCATACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp CATACACCACTGGGGGAGTGTCTGACTGATGCGTGGGAGGGCGGGTGGGGATGTCACCCAGTTCACTGTTaGCTGTGTTTGCTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: HTPLGECLTDAWEGGWGCHPVHC*LCLLEA
Trigger: AGCCTCAAGCAAACACAGCCAACAGTGAACTGGGTG...ACATCCCCACCCGCCCTCCCACGCATCAGTCAGACACTCCCCCAGTGGTGTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp CTGGAACCAACGTTGGCCATGAACAGATCTGGCGGGTGGGATGTTCTGCTGTCAAGCTTGGCCTTCTGCTaGTCCATCTCGTCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: LEPTLAMNRSGGWDVLLSSLAFC*SISSRR
Trigger: CCGCCTGGACGAGATGGACCAGCAGAAGGCCAAGCT...TGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCCAACGTTGGTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp GTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAGTTTGCTCCTTGCCTaGTTGATTTCGTCTTGCGTT +
Preference number: 4 (lower is better)
Translates to: VSPEWLEWIGGLGKVCGTSLLLA*LISSCV
Trigger: AACGCAAGACGAAATCAACCAGGCAAGGAGCAAACT...GGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp TTGTGGCTACTGCCTCTTCCCGCAGCGTGGATAATGCCTGGGCCTCTGCAGGTGCGGCTTTCATGCAGCTaGGAAAGTTTGCTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: LWLLPLPAAWIMPGPLQVRLSCS*ESLLLA
Trigger: GGCAAGGAGCAAACTTTCCCAGCTGCATGAAAGCCG...CACCTGCAGAGGCCCAGGCATTATCCACGCTGCGGGAAGAGGCAGTAGCCACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CCA 90 bp AACAGATCTGGCGGGTGGGATGTTCTGCTGTCACACCAGGGGACCAGAGCCCCACGGCTTTCATGCAGCTaGGAAAGTTTGCTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: NRSGGWDVLLSHQGTRAPRLSCS*ESLLLA
Trigger: GGCAAGGAGCAAACTTTCCCAGCTGCATGAAAGCCG...TGGGGCTCTGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGCCAGATCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp GGTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATAGACATCTGCACCGCCTTCGCTCAGGTTaGCCAGGTCGGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GPWSTVATVCVCIYRHLHRLRSG*PGRSGW
Trigger: CCAGCCTGACCGACCTGGCCAACCTGAGCGAAGGCG...GTGCAGATGTCTATATATACACACACACACCGTCGCCACCGTACTCCAAGGACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp GAGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGAAGGGGTCTTCTGTCTaGAAAGGATCCGGATGCAAC +
Preference number: 4 (lower is better)
Translates to: ETKIPGKLQAEGSGVARRKGSSV*KGSGCN
Trigger: GTTGCATCCGGATCCTTTCCAGACAGAAGACCCCTT...CCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp TCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAGAGCGGGAGGCAGGCAGAGCCACGGAATaGGTCACTTTCTTTGAAAGG +
Preference number: 4 (lower is better)
Translates to: SSPRLTAVCSSPEEEREAGRATE*VTFFER
Trigger: CCTTTCAAAGAAAGTGACCCATTCCGTGGCTCTGCC...TGCCTCCCGCTCTTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp GAGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGGGCAGAGCCACGGAATaGGTCACTTTCTTTGAAAGG +
Preference number: 4 (lower is better)
Translates to: ETKIPGKLQAEGSGVARRGRATE*VTFFER
Trigger: CCTTTCAAAGAAAGTGACCCATTCCGTGGCTCTGCC...CCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp AAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGATCTGCGGAACCAAGCTaGCTTACAGGTGTACTTTTA +
Preference number: 4 (lower is better)
Translates to: KSQGSCKRKGVGWPGGGGSAEPS*LTGVLL
Trigger: TAAAAGTACACCTGTAAGCCAGCTTGGTTCCGCAGA...TCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp GCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTCTGCGGAACCAAGCTaGCTTACAGGTGTACTTTTA +
Preference number: 4 (lower is better)
Translates to: APSGWNGSGASGKSAEPSSAEPS*LTGVLL
Trigger: TAAAAGTACACCTGTAAGCCAGCTTGGTTCCGCAGA...GCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp CTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATAGACATCTGCACTGCCGCTGTCAGCCCCGAGTaGCTGGAATGGATCGGGGGC +
Preference number: 4 (lower is better)
Translates to: LGVRWRRCVCVYIDICTAAVSPE*LEWIGG
Trigger: GCCCCCGATCCATTCCAGCCACTCGGGGCTGACAGC...GGCAGTGCAGATGTCTATATATACACACACACACCGTCGCCACCGTACTCCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CCA 90 bp GCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAAACCCCTTTTTACTTTaGAACGGGTCGCCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: ALGASSPRLTAVCSSPEENPFLL*NGSPLS
Trigger: TGACAGCGGCGACCCGTTCCAAAGTAAAAAGGGGTT...TTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp AGGCAGGACGGGGACGGCGCCAGGGAACACAGTCTTCTTTCTCTTGGAGGGTGGAACCCCTTTTTACTTTaGAACGGGTCGCCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: RQDGDGAREHSLLSLGGWNPFLL*NGSPLS
Trigger: TGACAGCGGCGACCCGTTCCAAAGTAAAAAGGGGTT...CCACCCTCCAAGAGAAAGAAGACTGTGTTCCCTGGCGCCGTCCCCGTCCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CCA 90 bp CTGGATTCAAAGGGGTCGAGCTTCGAAGGTAAGGAAGGGTTTTTCGTGAATGGACGGAAGGGAGTGGGGTaGCCCGGAGGCGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: LDSKGSSFEGKEGFFVNGRKGVG*PGGGGL
Trigger: GAGTCCTCCGCCTCCGGGCCACCCCACTCCCTTCCG...TCCATTCACGAAAAACCCTTCCTTACCTTCGAAGCTCGACCCCTTTGAATCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CCA 90 bp AGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCACGTCCTTGGAGTACGGTaGCGACGGTGTGTGTGTGTA +
Preference number: 4 (lower is better)
Translates to: RASPGDVTFPGLAAESAHVLGVR*RRCVCV
Trigger: TACACACACACACCGTCGCCACCGTACTCCAAGGAC...GTGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CCA 90 bp CCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGTTTACCTTGGACATCTaGCTGAAGTCGGCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: PEWLEWIGGLGKVCGTKLFTLDI*LKSAKP
Trigger: AGGCTTTGCCGACTTCAGCCAGATGTCCAAGGTAAA...CAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp GGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGTTTACCTTGGACATCTaGCTGAAGTCGGCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: GLAAESAHPEQAPESRSLFTLDI*LKSAKP
Trigger: AGGCTTTGCCGACTTCAGCCAGATGTCCAAGGTAAA...CAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602022.5
CDS-3UTR CCA 90 bp GGGGGCCAGACACAAGAGACAGATGAGCTCGCCAGCAGTGCCTTCCCAGCAGCCAGCACCAAGACGAAATaGGAAACTACATGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GGQTQETDELASSAFPAASTKTK*ETTCPQ
Trigger: CTGGGGACATGTAGTTTCCCATTTCGTCTTGGTGCT...GGCTGCTGGGAAGGCACTGCTGGCGAGCTCATCTGTCTCTTGTGTCTGGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp CCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGATCATCCTTTACCATaGCTCCAAAACTGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: PEWLEWIGGLGKVCGTKLDHPLP*LQNCPS
Trigger: AGAGGGGCAGTTTTGGAGCCATGGTAAAGGATGATC...CAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594975.5
CDS-3UTR CCA 90 bp GCCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTAGGAGTCTCCCATGGTaGGGCAGTGTCTTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: ARGRLWKPPHYESTRKESRSLPW*GSVFAG
Trigger: CCCTGCAAAGACACTGCCCCACCATGGGAGACTCCT...ACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602009.5
CDS-3UTR CCA 90 bp TGTCCTGGCCCGGCACCGCCAATAGGAAGTGAGACCGGCTCTGAAATCACAGCTCAGGAGCCTGTGCACTaGGCCCTAAATCTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: CPGPAPPIGSETGSEITAQEPVH*ALNLLP
Trigger: TGGCAGAAGATTTAGGGCCCAGTGCACAGGCTCCTG...AGCTGTGATTTCAGAGCCGGTCTCACTTCCTATTGGCGGTGCCGGGCCAGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CCA 90 bp CCGTGCTCATGCCTAGTAATACTTGACAGTGGAGGAATGTGGAAGGAGCCGTGGATGTGGAAGGAGCCGTaGAGGTCACCCAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PCSCLVILDSGGMWKEPWMWKEP*RSPSLG
Trigger: CCCCAGGCTGGGTGACCTCCACGGCTCCTTCCACAT...CCACGGCTCCTTCCACATTCCTCCACTGTCAAGTATTACTAGGCATGAGCACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602151.1
3UTR CAA 72 bp TCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTaGGAGTACGGTGGCGACGGTGTGTGTGTGTATATA +
Preference number: 4 (lower is better)
Translates to: SAHPEQAPESRS*EYGGDGVCVYI
Trigger: TATATACACACACACACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
3UTR CAA 72 bp CAACAGACAGCCGCCTGCACTTGGCTGGAACCAACGTaGGCCATGAACAGATCTGGCGGGTGGGATGTTCTG +
Preference number: 4 (lower is better)
Translates to: QQTAACTWLEPT*AMNRSGGWDVL
Trigger: CAGAACATCCCACCCGCCAGATCTGTTCATGGCCAACGTTGGTTCCAGCCAAGTGCAGGCGGCTGTCTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp CGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCCCGAGGCAGAGGCCTTAGGGCTGCTGGTGTCGTaGAATTTAGGCGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: RRTQLTEVKSAKPEAEALGLLVS*NLGGGM
Trigger: CATGCCACCGCCTAAATTTCACGACACCAGCAGCCC...TAAGGCCTCTGCCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp CATTTTATACAACGAGTGCATACACCACTGGGGGAGTGTCTGACTGATGCGTGGCTGCAGAGGGCGGTGTaGCCATCAGAGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: HFIQRVHTPLGECLTDAWLQRAV*PSEGCW
Trigger: CCAGCAGCCCTCTGATGGTCACACCGCCCTCTGCAG...CCACGCATCAGTCAGACACTCCCCCAGTGGTGTATGCACTCGTTGTATAAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp AGGTCCCAGACCCTGCCCAGGACATCAAGAGGCAGCTTTGAGTTCATGAGGACTCCTTGTCAATGTCACTaGGGTCCCAGACCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RSQTLPRTSRGSFEFMRTPCQCH*GPRPCP
Trigger: TGGGCAGGGTCTGGGACCTCAGTGACATTGACAAGG...AGTCCTCATGAACTCAAAGCTGCCTCTTGATGTCCTGGGCAGGGTCTGGGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000596037.5
CDS-3UTR TCA 90 bp CGGAACAGCACCAAGACGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCCCTTGTCAATGTCACTaGGGTCCCAGACCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RNSTKTKWETTCPQVRGCPCQCH*GPRPCP
Trigger: TGGGCAGGGTCTGGGACCTCAGTGACATTGACAAGG...GCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCGTCTTGGTGCTGTTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp GAGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGAACTGGGCAATCTCTTaGCTGATGTCATCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: ETKIPGKLQAEGSGVARRNWAIS*LMSSSS
Trigger: GGAGCTTGATGACATCAGTCAAGAGATTGCCCAGTT...CCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp GCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAAGTGATGAGATCATCTaGGTCTCATCCTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: ALGASSPRLTAVCSSPEESDEII*VSSWHF
Trigger: GAAGTGCCAGGATGAGACTCAGATGATCTCATCACT...TTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp AAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGATTTCGTCTTGCGTTaGCTTCAGGGACTTGATGAT +
Preference number: 4 (lower is better)
Translates to: KNPREAASGREWGGPEAEDFVLR*LQGLDD
Trigger: ATCATCAAGTCCCTGAAGTCAACGCAAGACGAAATC...CTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp AGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGGATTTCGTCTTGCGTTaGCTTCAGGGACTTGATGAT +
Preference number: 4 (lower is better)
Translates to: SPEWLEWIGGLGKVCGTKDFVLR*LQGLDD
Trigger: ATCATCAAGTCCCTGAAGTCAACGCAAGACGAAATC...CTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR TCA 90 bp TGTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACTCCAAATGGATCTGTTaGAGTTGTCTGCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: CQPRVAGMDRGPRESLRNSKWIC*SCLLFC
Trigger: GCAGAACAGCAGACAACTTCAACAGATCCATTTGGA...GTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR TCA 90 bp CAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAATCCAAATGGATCTGTTaGAGTTGTCTGCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: QPRVAGMDRGPRESLRNQSKWIC*SCLLFC
Trigger: GCAGAACAGCAGACAACTTCAACAGATCCATTTGGA...TTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR TCA 90 bp GAGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGATGGGTCACTTTCTTTaGAAGGGTCCCCTCCAAATG +
Preference number: 4 (lower is better)
Translates to: ETKIPGKLQAEGSGVARRMGHFL*KGPLQM
Trigger: CATTTGGAGGGGACCCTTTCAAAGAAAGTGACCCAT...CCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp AGTGGGGTGGCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCTCAACTTACAGAGGTaGAGTCTGCAAAGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: SGVARRRRTQLTEVKSAKLNLQR*SLQSPR
Trigger: CCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGAG...CTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGCCACCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp TGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATAGACATCTGCACTGCCCCGGATGTCTGCAGCTATaGGTAGGGAGGAGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: WSTVATVCVCIYRHLHCPGCLQL*VGRRRG
Trigger: TCCCCGCCTCCTCCCTACTCATAGCTGCAGACATCC...GGGGCAGTGCAGATGTCTATATATACACACACACACCGTCGCCACCGTACTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR TCA 90 bp AGTCCCAAACCGTGTCACAGCGTGGCATATGAGGGATGGAGGCCTTCTCCGTGTCCTTGGACATCTGGCTaGAGTCGGCAAAGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: SPKPCHSVAYEGWRPSPCPWTSG*SRQSLQ
Trigger: CTGAAGGCTTTGCCGACTTCAGCCAGATGTCCAAGG...ACACGGAGAAGGCCTCCATCCCTCATATGCCACGCTGTGACACGGTTTGGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR TCA 90 bp GCCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTAGGAAGAGGAATCCATaGCGTACAGAGGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: ARGRLWKPPHYESTRKESRKRNP*RTEAQE
Trigger: CTCCTGGGCCTCTGTACGTCATGGATTCCTCTTCCT...ACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp CAGGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTCATCTCGATCCAAGTaGCCATCCTTGTCAATGTCA +
Preference number: 4 (lower is better)
Translates to: QVLQPSLLTLNKPPSPGPSSRSK*PSLSMS
Trigger: TGACATTGACAAGGATGGGCACTTGGATCGAGATGA...AGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp TCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCATCATCTCGATCCAAGTaGCCATCCTTGTCAATGTCA +
Preference number: 4 (lower is better)
Translates to: SAPSGWNGSGASGKSAEPSSRSK*PSLSMS
Trigger: TGACATTGACAAGGATGGGCACTTGGATCGAGATGA...TGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp AGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGTCATCTCGATCCAAGTaGCCATCCTTGTCAATGTCA +
Preference number: 4 (lower is better)
Translates to: SPEWLEWIGGLGKVCGTKSSRSK*PSLSMS
Trigger: TGACATTGACAAGGATGGGCACTTGGATCGAGATGA...CTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp GCTCGGTACACCAAGTGCATGGCCACAGCGAACTCATCTCGATCCAAGTGCCCAGCTCGGTACACCAAGTaGATGGCCACAGCGAACTCA +
Preference number: 4 (lower is better)
Translates to: ARYTKCMATANSSRSKCPARYTK*MATANS
Trigger: TGAGTTCGCTGTGGCCATGCACTTGGTGTACCGAGC...TGGGCACTTGGATCGAGATGAGTTCGCTGTGGCCATGCACTTGGTGTACCGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000593760.5
CDS-3UTR GCA 90 bp GCTGGGCGGTTTAGGCCGTGGAGGAGCAGGTTTCTTCGGAGGCAGAGCAGGAGTACGCGAATTGGTCTTTaGTTAACTTCCCCGTTTGCC +
Preference number: 4 (lower is better)
Translates to: AGRFRPWRSRFLRRQSRSTRIGL*LTSPFA
Trigger: GGCAAACGGGGAAGTTAAGCAAAGACCAATTCGCGT...ACTCCTGCTCTGCCTCCGAAGAAACCTGCTCCTCCACGGCCTAAACCGCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR GCA 90 bp GGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCTTGGACTTTGTTTGTCCGGGCCGGGCGTaGCTCTCTCCGAAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: GGHSKQVLKGSRPILDFVCPGRA*LSPKAG
Trigger: TCCCGCCTTCGGAGAGAGGCACGCCCGGCCCGGACA...AACAAAGTCCAAGATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp CGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCAGGGGCAGACTCTGGTTGGGTTTCCTCCTGCTaGAATCGGTTCAGCTCCGAC +
Preference number: 4 (lower is better)
Translates to: RNGKLHVPRFEAAGADSGWVSSC*NRFSSD
Trigger: GTCGGAGCTGAACCGATTGCAGCAGGAGGAAACCCA...ACCAGAGTCTGCCCCTGCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GCCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTAGCTGGGTTTCCTCCTaGTGCAATCGGTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ARGRLWKPPHYESTRKESSWVSS*CNRFSS
Trigger: GGAGCTGAACCGATTGCAGCAGGAGGAAACCCAGCT...ACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GGGGAAGCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCATGGTTGATTTCGTCTTaGGTTGACTTCAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: GEALGASSPRLTAVCSSPWLISS*VDFRDL
Trigger: CAAGTCCCTGAAGTCAACGCAAGACGAAATCAACCA...TGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp GGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGACTCAACTTATGGTTGATTTCGTCTTaGGTTGACTTCAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: GSCKRKGVGWPGGGGLNLWLISS*VDFRDL
Trigger: CAAGTCCCTGAAGTCAACGCAAGACGAAATCAACCA...TAAGTTGAGTCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp CCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTTGGTTGATTTCGTCTTaGGTTGACTTCAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: PRVAGMDRGPRESLRNQAWLISS*VDFRDL
Trigger: CAAGTCCCTGAAGTCAACGCAAGACGAAATCAACCA...AGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp GGCAGGACGGGGACGGCGCCAGGGAACACAGTCTTCTTTCTCTTGGAGGGTGGGGGAAAGTTTGCTCCTTaGCTGGTTGATTTCGTCTTG +
Preference number: 4 (lower is better)
Translates to: GRTGTAPGNTVFFLLEGGGKFAP*LVDFVL
Trigger: CAAGACGAAATCAACCAGGCAAGGAGCAAACTTTCC...CCCACCCTCCAAGAGAAAGAAGACTGTGTTCCCTGGCGCCGTCCCCGTCCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR GCA 90 bp TGTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACGGAAAGTTTGCTCCTTaGCTGGTTGATTTCGTCTTG +
Preference number: 4 (lower is better)
Translates to: CQPRVAGMDRGPRESLRNGKFAP*LVDFVL
Trigger: CAAGACGAAATCAACCAGGCAAGGAGCAAACTTTCC...GTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp GTGCATACACCACTGGGGGAGTGTCTGACTGATGCGTGGGAGGGCGGGTGGGGAGGAAAGTTTGCTCCTTaGCTGGTTGATTTCGTCTTG +
Preference number: 4 (lower is better)
Translates to: VHTPLGECLTDAWEGGWGGKFAP*LVDFVL
Trigger: CAAGACGAAATCAACCAGGCAAGGAGCAAACTTTCC...TCCCCACCCGCCCTCCCACGCATCAGTCAGACACTCCCCCAGTGGTGTATGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp CCTCTGCCCAGGCTCATCTGTGTAAACACACACCCTGCCTCGGTCAGAAGTGGGTCCTGGCGGCTTTCATaGAGCTGGGAAAGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: PLPRLICVNTHPASVRSGSWRLS*SWESLL
Trigger: GAGCAAACTTTCCCAGCTGCATGAAAGCCGCCAGGA...CCCACTTCTGACCGAGGCAGGGTGTGTGTTTACACAGATGAGCCTGGGCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR GCA 90 bp GAACACGGGGCAGCCAAGGGAGACTGCCCAGTCACACTGGCACCTGGGGCACCTTCCGGATGCAACTCTTaGGTGTTGTTGCTAAATAAC +
Preference number: 4 (lower is better)
Translates to: EHGAAKGDCPVTLAPGAPSGCNS*VLLLNN
Trigger: GTTATTTAGCAACAACACGCAAGAGTTGCATCCGGA...AGGTGCCCCAGGTGCCAGTGTGACTGGGCAGTCTCCCTTGGCTGCCCCGTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR GCA 90 bp CCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGAGTTGTCTGCTGTTCTaGAAAGGGGTCATTCTGGAA +
Preference number: 4 (lower is better)
Translates to: PEWLEWIGGLGKVCGTKLSCLLF*KGVILE
Trigger: TTCCAGAATGACCCCTTTGCAGAACAGCAGACAACT...CAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp CCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGTCTGTTGAAGTTGTCTaGTGTTCTGCAAAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: PSGWNGSGASGKSAEPSWSVEVV*CSAKGS
Trigger: TGACCCCTTTGCAGAACAGCAGACAACTTCAACAGA...CCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp GGCCTCTGTAAGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAAAAAGAGGTGAAGTCTaGAAAGCCCGAGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: GLCKGFPRRCDLSRSCSRKRGEV*KARGRG
Trigger: GCCTCTGCCTCGGGCTTTGCAGACTTCACCTCTTTT...TCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCTTACAGAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp GGATCATCCATGGCTCCAAAACTGCCCCTCTCTGCCAGGGAGACGCCTTCGCTCGGCCACCAGTCTCAGTaGAACATAGAAACCCTTCTG +
Preference number: 4 (lower is better)
Translates to: GSSMAPKLPLSARETPSLGHQSQ*NIETLL
Trigger: CAGAAGGGTTTCTATGTTGCACTGAGACTGGTGGCC...GAGCGAAGGCGTCTCCCTGGCAGAGAGGGGCAGTTTTGGAGCCATGGATGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR GCA 90 bp CCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTACAACAGACAGCCGCCTaGACTTGGCTGGAACCAACG +
Preference number: 4 (lower is better)
Translates to: PGGGYGNHLITSPREKRVQQTAA*TWLEPT
Trigger: CGTTGGTTCCAGCCAAGTGCAGGCGGCTGTCTGTTG...TACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp CGGAACAGCACCAAGACGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCCAACAGACAGCCGCCTaGACTTGGCTGGAACCAACG +
Preference number: 4 (lower is better)
Translates to: RNSTKTKWETTCPQVRGCQQTAA*TWLEPT
Trigger: CGTTGGTTCCAGCCAAGTGCAGGCGGCTGTCTGTTG...GCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCGTCTTGGTGCTGTTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GGCCATGAACAGATCTGGCGGGTGGGATGTTCTGCTGTCACACCAGGGGACCAGTTCAAGCAATTCTCGTaGCTCAGCACTCGTACCTCC +
Preference number: 4 (lower is better)
Translates to: GHEQIWRVGCSAVTPGDQFKQFS*LSTRTS
Trigger: GGAGGTACGAGTGCTGAGGCACGAGAATTGCTTGAA...CTGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602009.5
CDS-3UTR GCA 90 bp TGTCCTGGCCCGGCACCGCCAATAGGAAGTGAGACCGGCTCTGAAATCACAGCTCTGCCAACCCCAAGATaGTCAGAGACTCATCTGCTC +
Preference number: 4 (lower is better)
Translates to: CPGPAPPIGSETGSEITALPTPR*SETHLL
Trigger: GAGCAGATGAGTCTCTGAGCATCTTGGGGTTGGCAG...AGCTGTGATTTCAGAGCCGGTCTCACTTCCTATTGGCGGTGCCGGGCCAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR GCA 90 bp TTGTGGCTACTGCCTCTTCCCGCAGCGTGGATAATGCCTGGGCCTCTGCAGGTGTGTAAACACACACCCTaGCTCGGTCAGAAGTGGGAT +
Preference number: 4 (lower is better)
Translates to: LWLLPLPAAWIMPGPLQVCKHTP*LGQKWD
Trigger: ATCCCACTTCTGACCGAGGCAGGGTGTGTGTTTACA...CACCTGCAGAGGCCCAGGCATTATCCACGCTGCGGGAAGAGGCAGTAGCCACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CCA 90 bp GGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGCTTTCTCTTGGAGGGTaGGATGAGGGACGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GGGYGNHLITSPREKRVWLSLGG*DEGRGQ
Trigger: CTGCCCCCGTCCCTCATCCCACCCTCCAAGAGAAAG...CCATACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp TGTAAGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTGTGCTAGAAGGTTCTaGGTGAGGCCCGAGTGCATG +
Preference number: 4 (lower is better)
Translates to: CKGFPRRCDLSRSCSRVCCARRF*VRPECM
Trigger: CATGCACTCGGGCCTCACCCAGAACCTTCTAGCACA...GCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCTTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp TCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCACCCTGAATGTGCTAGAAGGTTCTaGGTGAGGCCCGAGTGCATG +
Preference number: 4 (lower is better)
Translates to: SPGDVTFPGLAAESAHPECARRF*VRPECM
Trigger: CATGCACTCGGGCCTCACCCAGAACCTTCTAGCACA...TTCAGGGTGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp GTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCATAGCTAACGCGAATTaGTCTTTGCTTAACTTCCCC +
Preference number: 4 (lower is better)
Translates to: VSPEWLEWIGGLGKVCGTIANAN*SLLNFP
Trigger: GGGGAAGTTAAGCAAAGACCAATTCGCGTTAGCTAT...GGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp ACCCAGTTCACTGTTGGCTGTGTTTGCTTGAGGCTGTGCTTGGGGGACAGGCTCGCATGTCTCGGAGCTTaGCCTTCTGCTGGTCCATCT +
Preference number: 4 (lower is better)
Translates to: TQFTVGCVCLRLCLGDRLACLGA*PSAGPS
Trigger: AGATGGACCAGCAGAAGGCCAAGCTCCGAGACATGC...GAGCCTGTCCCCCAAGCACAGCCTCAAGCAAACACAGCCAACAGTGAACTGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CCA 90 bp AGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCACGGTTCAGCTCCGACTTaGCTCGGTTCAGATCGTCTT +
Preference number: 4 (lower is better)
Translates to: RASPGDVTFPGLAAESAHGSAPT*LGSDRL
Trigger: AAGACGATCTGAACCGAGCCAAGTCGGAGCTGAACC...GTGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp GCCCACGCCAGCTGCTGCTCCTCATTGCCAAAAGAGGTGAAGTCTGCAAAGCCCGGTTCAGCTCCGACTTaGCTCGGTTCAGATCGTCTT +
Preference number: 4 (lower is better)
Translates to: AHASCCSSLPKEVKSAKPGSAPT*LGSDRL
Trigger: AAGACGATCTGAACCGAGCCAAGTCGGAGCTGAACC...GGGCTTTGCAGACTTCACCTCTTTTGGCAATGAGGAGCAGCAGCTGGCGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602022.5
CDS-3UTR CCA 90 bp CCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGAGTTTGCTCCTTGCCTaGTTGATTTCGTCTTGCGTT +
Preference number: 4 (lower is better)
Translates to: PEWLEWIGGLGKVCGTKLSLLLA*LISSCV
Trigger: AACGCAAGACGAAATCAACCAGGCAAGGAGCAAACT...CAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp AGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCACCGGCTTTCATGCAGCTaGGAAAGTTTGCTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: RASPGDVTFPGLAAESAHRLSCS*ESLLLA
Trigger: GGCAAGGAGCAAACTTTCCCAGCTGCATGAAAGCCG...GTGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp GTGTGGTGTTTAGAGAGCACGAGCGCTCACTCTTATTCCAGGGAGGAAGAGGAACTCCTGTGGGCCTCCTaGCGGCTTTCATGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VWCLESTSAHSYSREEEELLWAS*RLSCSW
Trigger: CCAGCTGCATGAAAGCCGCCAGGAGGCCCACAGGAG...TTCCTCTTCCTCCCTGGAATAAGAGTGAGCGCTCGTGCTCTCTAAACACCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp GGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGGAGCTCCTGTGGGCCTCCTaGCGGCTTTCATGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GGYGNHLITSPREKRVWELLWAS*RLSCSW
Trigger: CCAGCTGCATGAAAGCCGCCAGGAGGCCCACAGGAG...CTCCCATACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp CCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCTCCATCGAGCACCTaGTCATACTGCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: PGDVTFPGLAAESAHPEQAPSST*SYCSRL
Trigger: GAGCCTGGAGCAGTATGACCAGGTGCTCGATGGAGC...TTGTTCAGGGTGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp CACAGCGAACTCATCTCGATCCAAGTGCCCATCCTTGTCAATGTCACTGAGGTCGTCAGGCTGGCACCATaGGCTCCATCGAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: HSELISIQVPILVNVTEVVRLAP*APSSTW
Trigger: CCAGGTGCTCGATGGAGCCCATGGTGCCAGCCTGAC...GACCTCAGTGACATTGACAAGGATGGGCACTTGGATCGAGATGAGTTCGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CCA 90 bp ATGGCCACAGCGAACTCATCTCGATCCAAGTGCCCATCCTTGTCAATGTCACTGCCAGGTCGGTCAGGCTaGCACCATGGGCTCCATCGA +
Preference number: 4 (lower is better)
Translates to: MATANSSRSKCPSLSMSLPGRSG*HHGLHR
Trigger: TCGATGGAGCCCATGGTGCCAGCCTGACCGACCTGG...CAGTGACATTGACAAGGATGGGCACTTGGATCGAGATGAGTTCGCTGTGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CCA 90 bp CATTTTATACAACGAGTGCATACACCACTGGGGGAGTGTCTGACTGATGCGTGGCGCCTTCGCTCAGGTTaGCCAGGTCGGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: HFIQRVHTPLGECLTDAWRLRSG*PGRSGW
Trigger: CCAGCCTGACCGACCTGGCCAACCTGAGCGAAGGCG...CCACGCATCAGTCAGACACTCCCCCAGTGGTGTATGCACTCGTTGTATAAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp TGTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACGTCAGCTCCTTTAAATaGGTCAGATTTGAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: CQPRVAGMDRGPRESLRNVSSFK*VRFEGV
Trigger: GACCCCTTCAAATCTGACCCATTTAAAGGAGCTGAC...GTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp TGTGTTTGCTTGAGGCTGTGCTTGGGGGACAGGCTCCCTGTGCTGTTGAGGCTGGCAAAGGGGTCATTCTaGAACGGGTCGCCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: CVCLRLCLGDRLPVLLRLAKGSF*NGSPLK
Trigger: CTTCAAAGGCGACCCGTTCCAGAATGACCCCTTTGC...CAGCCTCAACAGCACAGGGAGCCTGTCCCCCAAGCACAGCCTCAAGCAAACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CCA 90 bp TCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGGGTTTTTCGTGAATaGATCCGAGGTAAATGGGTC +
Preference number: 4 (lower is better)
Translates to: SAPSGWNGSGASGKSAEPRVFRE*IRGKWV
Trigger: GACCCATTTACCTCGGATCCATTCACGAAAAACCCT...TGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp GTGCATACACCACTGGGGGAGTGTCTGACTGATGCGTGGGAGGGCGGGTGGGGAAGGGTTTTTCGTGAATaGATCCGAGGTAAATGGGTC +
Preference number: 4 (lower is better)
Translates to: VHTPLGECLTDAWEGGWGRVFRE*IRGKWV
Trigger: GACCCATTTACCTCGGATCCATTCACGAAAAACCCT...TCCCCACCCGCCCTCCCACGCATCAGTCAGACACTCCCCCAGTGGTGTATGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp ATGGCCACAGCGAACTCATCTCGATCCAAGTGCCCATCCTTGTCAATGTCACTGCCCGAGTGGCTGGAATaGATCGGGGGCCTCGGGAAA +
Preference number: 4 (lower is better)
Translates to: MATANSSRSKCPSLSMSLPEWLE*IGGLGK
Trigger: TTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG...CAGTGACATTGACAAGGATGGGCACTTGGATCGAGATGAGTTCGCTGTGGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CCA 90 bp GTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATAGACATCTGCACTGAGGCGGGGAAGCCCTaGGTGCTTCCTCTCCTCGAC +
Preference number: 4 (lower is better)
Translates to: VLGVRWRRCVCVYIDICTEAGKP*VLPLLD
Trigger: GTCGAGGAGAGGAAGCACCCAGGGCTTCCCCGCCTC...AGTGCAGATGTCTATATATACACACACACACCGTCGCCACCGTACTCCAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CCA 90 bp CTGTCTTTGGAGTTGGGGGAATCACTGGCCACTTGCAAACTGCCACTTCACTGCACAGCCGCCTGCACTTaGCTGGAACCAACGTTGGCC +
Preference number: 4 (lower is better)
Translates to: LSLELGESLATCKLPLHCTAACT*LEPTLA
Trigger: GGCCAACGTTGGTTCCAGCCAAGTGCAGGCGGCTGT...GCAGTGAAGTGGCAGTTTGCAAGTGGCCAGTGATTCCCCCAACTCCAAAGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp TTCTCGGAATCTGTGTTCTGTGATCACAAGTTGCGACCGCTGCCAACCCCAAGATGCCTCGGTCAGAAGTaGGATCTGCTGCGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: FSESVFCDHKLRPLPTPRCLGQK*DLLRRQ
Trigger: CTGGCGGCGCAGCAGATCCCACTTCTGACCGAGGCA...TCTTGGGGTTGGCAGCGGTCGCAACTTGTGATCACAGAACACAGATTCCGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CCA 90 bp AGCCTCCCAAAGGAAGAGGAGTCCACTTGCGACAACCAGAAACGACCAGGACGCGTGGCATATGAGGGATaGAGGCCTTCTCCGTGTGCT +
Preference number: 4 (lower is better)
Translates to: SLPKEEESTCDNQKRPGRVAYEG*RPSPCA
Trigger: AGCACACGGAGAAGGCCTCCATCCCTCATATGCCAC...GCGTCCTGGTCGTTTCTGGTTGTCGCAAGTGGACTCCTCTTCCTTTGGGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CCA 90 bp GTGATCACAAGTTGCGACCGCTGCCAACCCCAAGATGCTCAGAGACTCATCTGCTCTGCTTTCGGGAGATaGTTTCCCGCCTGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: VITSCDRCQPQDAQRLICSAFGR*FPACPG
Trigger: TCCTGGGCAGGCGGGAAACCATCTCCCGAAAGCAGA...GCAGATGAGTCTCTGAGCATCTTGGGGTTGGCAGCGGTCGCAACTTGTGATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR CAA 72 bp AGACAGATCCAGCCTCCCAAAGGAAGAGGAGTCCACTaGCGACAACCAGAAACGACCAGGACGCCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: RQIQPPKGRGVH*RQPETTRTPEG
Trigger: TCCCTCAGGCGTCCTGGTCGTTTCTGGTTGTCGCAAGTGGACTCCTCTTCCTTTGGGAGGCTGGATCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR TCA 90 bp CTGGAACCAACGTTGGCCATGAACAGATCTGGCGGGTGGGATGTTCTGCTGTCATTGGCTGTGTTTGCTTaGGGCTGTGCTTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: LEPTLAMNRSGGWDVLLSLAVFA*GCAWGT
Trigger: TGTCCCCCAAGCACAGCCTCAAGCAAACACAGCCAA...TGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCCAACGTTGGTTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp AGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGATTTCGTCTTGCGTTaGCTTCAGGGACTTGATGAT +
Preference number: 4 (lower is better)
Translates to: RQKSQGSCKRKGVGWPGGDFVLR*LQGLDD
Trigger: ATCATCAAGTCCCTGAAGTCAACGCAAGACGAAATC...GCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp GGCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCCCGAGGCGATTTCGTCTTGCGTTaGCTTCAGGGACTTGATGAT +
Preference number: 4 (lower is better)
Translates to: GPEAEDSTYRGEVCKARGDFVLR*LQGLDD
Trigger: ATCATCAAGTCCCTGAAGTCAACGCAAGACGAAATC...GCCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp TCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAGAGCGGGAGGCATCCAAATGGATCTGTTaGAGTTGTCTGCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SSPRLTAVCSSPEEEREASKWIC*SCLLFC
Trigger: GCAGAACAGCAGACAACTTCAACAGATCCATTTGGA...TGCCTCCCGCTCTTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp AGTGGGGTGGCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGTTTAAAGGGGTCATCTaGGAATCCTGCCCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: SGVARRRRTQLTEVKSAKFKGVI*ESCPSQ
Trigger: TTGGGAGGGGCAGGATTCTCAGATGACCCCTTTAAA...CTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGCCACCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR TCA 90 bp TTTTTACTTTGGAACGGGTCGCCGCTGTCAGCCCCGAGTGGCTGGAATGGATCGCATTGCCAAAAGAGGTaGAGTCTGCAAAGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: FLLWNGSPLSAPSGWNGSHCQKR*SLQSPR
Trigger: CCTCGGGCTTTGCAGACTTCACCTCTTTTGGCAATG...CGATCCATTCCAGCCACTCGGGGCTGACAGCGGCGACCCGTTCCAAAGTAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602022.5
CDS-3UTR TCA 90 bp GGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCTGGGGCGCTGCTTGCCATTAACCAACGTTGGCCATaGACAGATCTGGCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GEANSYLKEQHPGALLAINQRWP*TDLAGG
Trigger: CCCACCCGCCAGATCTGTTCATGGCCAACGTTGGTT...AATGGCAAGCAGCGCCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp TTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCTGGGGCGCTGCTTGCAACCAACGTTGGCCATaGACAGATCTGGCGGGTGGG +
Preference number: 4 (lower is better)
Translates to: FRRGQFLLERATPWGAACNQRWP*TDLAGG
Trigger: CCCACCCGCCAGATCTGTTCATGGCCAACGTTGGTT...GCAAGCAGCGCCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp CGGAACAGCACCAAGACGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCAGGAAGAGGAATCCATaGCGTACAGAGGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: RNSTKTKWETTCPQVRGCRKRNP*RTEAQE
Trigger: CTCCTGGGCCTCTGTACGTCATGGATTCCTCTTCCT...GCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCGTCTTGGTGCTGTTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp TGTCCTGGCCCGGCACCGCCAATAGGAAGTGAGACCGGCTCTGAAATCACAGCTGGAATCTGTGTTCTGTaGTCACAAGTTGCGACCGCT +
Preference number: 4 (lower is better)
Translates to: CPGPAPPIGSETGSEITAGICVL*SQVATA
Trigger: AGCGGTCGCAACTTGTGATCACAGAACACAGATTCC...AGCTGTGATTTCAGAGCCGGTCTCACTTCCTATTGGCGGTGCCGGGCCAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR GCA 90 bp TTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTAGGCTGCAGCCACGCGTaGGCACTGGGACGACGGGAG +
Preference number: 4 (lower is better)
Translates to: LQKWQCRINNARDRECEVGCSHA*ALGRRE
Trigger: CTCCCGTCGTCCCAGTGCGCACGCGTGGCTGCAGCC...TACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000248070.10
CDS-3UTR GCA 90 bp GGCCATGAACAGATCTGGCGGGTGGGATGTTCTGCTGTCACACCAGGGGACCAGGGCCACCAGTCTCAGTaGAACATAGAAACCCTGTTT +
Preference number: 4 (lower is better)
Translates to: GHEQIWRVGCSAVTPGDQGHQSQ*NIETLF
Trigger: AAACAGGGTTTCTATGTTGCACTGAGACTGGTGGCC...CTGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597937.5
CDS-3UTR GCA 90 bp AGGTCCCAGACCCTGCCCAGGACATCAAGAGGCAGCTTTGAGTTCATGAGGACTTTCATGGCCACTCTGTaGACAGGCCACCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: RSQTLPRTSRGSFEFMRTFMATL*TGHQSQ
Trigger: CTGAGACTGGTGGCCTGTGCACAGAGTGGCCATGAA...AGTCCTCATGAACTCAAAGCTGCCTCTTGATGTCCTGGGCAGGGTCTGGGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000596037.5
CDS-3UTR GCA 90 bp CATTTTATACAACGAGTGCATACACCACTGGGGGAGTGTCTGACTGATGCGTGGAGCCCAGTGGGCCTCTaGAGAGGGCGGTGTGACCAT +
Preference number: 4 (lower is better)
Translates to: HFIQRVHTPLGECLTDAWSPVGL*RGRCDH
Trigger: ATGGTCACACCGCCCTCTGCAGAGGCCCACTGGGCT...CCACGCATCAGTCAGACACTCCCCCAGTGGTGTATGCACTCGTTGTATAAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp GCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAATCATCTCGATCCAAGTaGCCATCCTTGTCAATGTCA +
Preference number: 4 (lower is better)
Translates to: ALGASSPRLTAVCSSPEESSRSK*PSLSMS
Trigger: TGACATTGACAAGGATGGGCACTTGGATCGAGATGA...TTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp AACAGCACCAAGACGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCAGGGTTTGCTTGAGGCTGTaGTTGGGGGACAGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: NSTKTKWETTCPQVRGCRVCLRL*LGDRLP
Trigger: AGGGAGCCTGTCCCCCAAGCACAGCCTCAAGCAAAC...CCTGCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCGTCTTGGTGCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp AACAGCACCAAGACGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCAGGCTTAACTTCCCCGTTTaGCTCGTATCGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: NSTKTKWETTCPQVRGCRLNFPV*LVSARA
Trigger: GGCCCTGGCCGATACGAGGCAAACGGGGAAGTTAAG...CCTGCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCGTCTTGGTGCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp TCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCACCCTGAACGAGCTCCTGCAAACTaGTTGTTTCCCGGTCTAGGT +
Preference number: 4 (lower is better)
Translates to: SPGDVTFPGLAAESAHPERAPAN*LFPGLG
Trigger: ACCTAGACCGGGAAACAAGCAGTTTGCAGGAGCTCG...TTCAGGGTGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp CCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGGTTTCCTCCTGCTaGAATCGGTTCAGCTCCGAC +
Preference number: 4 (lower is better)
Translates to: PGGGYGNHLITSPREKRVWVSSC*NRFSSD
Trigger: GTCGGAGCTGAACCGATTGCAGCAGGAGGAAACCCA...TACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCTGGGGCGCTGCTTGCCATTCTCGCCCAGCCTGAATaGTCTGCTCCAGCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: GEANSYLKEQHPGALLAILAQPE*SAPAGF
Trigger: AAACCCAGCTGGAGCAGAGCATTCAGGCTGGGCGAG...AATGGCAAGCAGCGCCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp TCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCACCCTGAATCCTGGCGGCTTTCATaGAGCTGGGAAAGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: SPGDVTFPGLAAESAHPESWRLS*SWESLL
Trigger: GAGCAAACTTTCCCAGCTGCATGAAAGCCGCCAGGA...TTCAGGGTGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp AGAGGTGAAGTCTGCAAAGCCCGAGGCAGAGGCCTTAGAAGGTTTAGCTGCAGAAAAACTGCCCCTCTCTaGCAGGGAGACGCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: RGEVCKARGRGLRRFSCRKTAPL*QGDAFA
Trigger: AGCGAAGGCGTCTCCCTGGCAGAGAGGGGCAGTTTT...TCTGCAGCTAAACCTTCTAAGGCCTCTGCCTCGGGCTTTGCAGACTTCACCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR GCA 90 bp AACAGCACCAAGACGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCAGGAAAACTGCCCCTCTCTaGCAGGGAGACGCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: NSTKTKWETTCPQVRGCRKTAPL*QGDAFA
Trigger: AGCGAAGGCGTCTCCCTGGCAGAGAGGGGCAGTTTT...CCTGCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCGTCTTGGTGCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp CGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGCTCCGGATGCAACTCTTaGGTGTTGTTGCTAAATAAC +
Preference number: 4 (lower is better)
Translates to: RVAGMDRGPRESLRNQAGSGCNS*VLLLNN
Trigger: GTTATTTAGCAACAACACGCAAGAGTTGCATCCGGA...GCCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR GCA 90 bp GAGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGAGTTGTCTGCTGTTCTaGAAAGGGGTCATTCTGGAA +
Preference number: 4 (lower is better)
Translates to: ETKIPGKLQAEGSGVARRSCLLF*KGVILE
Trigger: TTCCAGAATGACCCCTTTGCAGAACAGCAGACAACT...CCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp CATACACCACTGGGGGAGTGTCTGACTGATGCGTGGGAGGGCGGGTGGGGATGTTCTGTTGAAGTTGTCTaGTGTTCTGCAAAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: HTPLGECLTDAWEGGWGCSVEVV*CSAKGS
Trigger: TGACCCCTTTGCAGAACAGCAGACAACTTCAACAGA...ACATCCCCACCCGCCCTCCCACGCATCAGTCAGACACTCCCCCAGTGGTGTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp CACCAAGTGCATGGCCACAGCGAACTCATCTCGATCCAAGTGCCCATCCTTGTCTACAGAGGTGAAGTCTaGAAAGCCCGAGGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: HQVHGHSELISIQVPILVYRGEV*KARGRG
Trigger: GCCTCTGCCTCGGGCTTTGCAGACTTCACCTCTGTA...GACAAGGATGGGCACTTGGATCGAGATGAGTTCGCTGTGGCCATGCACTTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR GCA 90 bp GCGAACTCATCTCGATCCAAGTGCCCATCCTTGTCAATGTCACTGAGGTCCCAGAAATCCCAGGGAAGCTaGAAGCGGAAGGGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: ANSSRSKCPSLSMSLRSQKSQGS*KRKGVG
Trigger: CCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTT...CTGGGACCTCAGTGACATTGACAAGGATGGGCACTTGGATCGAGATGAGTTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR GCA 90 bp AGCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAGTATATATAGACATCTaGACTGCCCCCTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SPGCFLSSTDRCVFVPRGVYIDI*TAPSLE
Trigger: TTCCAGAGAGGGGGCAGTGCAGATGTCTATATATAC...TCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR GCA 90 bp GGCCATGAACAGATCTGGCGGGTGGGATGTTCTGCTGTCACACCAGGGGACCAGTGGCCACTTGCAAACTaGCACTTCACTGCCAACTTT +
Preference number: 4 (lower is better)
Translates to: GHEQIWRVGCSAVTPGDQWPLAN*HFTANF
Trigger: AAAGTTGGCAGTGAAGTGGCAGTTTGCAAGTGGCCA...CTGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCTGGGGCGCTGCTTGCCATTCTTCGTCCTAGCTGCTaGCTGAGTGTGGCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: GEANSYLKEQHPGALLAILRPSC*LSVAGV
Trigger: GACTCCTGCCACACTCAGGCAGCAGCTAGGACGAAG...AATGGCAAGCAGCGCCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602009.5
CDS-3UTR CCA 90 bp AGTGCATGGCCACAGCGAACTCATCTCGATCCAAGTGCCCATCCTTGTCAATGTCTTTCTCTTGGAGGGTaGGATGAGGGACGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SAWPQRTHLDPSAHPCQCLSLGG*DEGRGQ
Trigger: CTGCCCCCGTCCCTCATCCCACCCTCCAAGAGAAAG...ACATTGACAAGGATGGGCACTTGGATCGAGATGAGTTCGCTGTGGCCATGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000593760.5
CDS-3UTR CCA 90 bp CGGAACAGCACCAAGACGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCTGTGCTAGAAGGTTCTaGGTGAGGCCCGAGTGCATG +
Preference number: 4 (lower is better)
Translates to: RNSTKTKWETTCPQVRGCCARRF*VRPECM
Trigger: CATGCACTCGGGCCTCACCCAGAACCTTCTAGCACA...GCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCGTCTTGGTGCTGTTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp CAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAATAGCTAACGCGAATTaGTCTTTGCTTAACTTCCCC +
Preference number: 4 (lower is better)
Translates to: QKSQGSCKRKGVGWPGGGIANAN*SLLNFP
Trigger: GGGGAAGTTAAGCAAAGACCAATTCGCGTTAGCTAT...TCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp CCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGATAGCTAACGCGAATTaGTCTTTGCTTAACTTCCCC +
Preference number: 4 (lower is better)
Translates to: PEWLEWIGGLGKVCGTKLIANAN*SLLNFP
Trigger: GGGGAAGTTAAGCAAAGACCAATTCGCGTTAGCTAT...CAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp ACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGACGGTGTGTATAGCTAACGCGAATTaGTCTTTGCTTAACTTCCCC +
Preference number: 4 (lower is better)
Translates to: TLNKPPSPGPWSTVATVCIANAN*SLLNFP
Trigger: GGGGAAGTTAAGCAAAGACCAATTCGCGTTAGCTAT...ACACACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp GCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTTTCAGATCGTCTTCCTaGGACTTTAAGTCAGATTCC +
Preference number: 4 (lower is better)
Translates to: AESAHPEQAPESRSLEYGFRSSS*DFKSDS
Trigger: GGAATCTGACTTAAAGTCCCAGGAAGACGATCTGAA...ACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp CAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAATTCAGATCGTCTTCCTaGGACTTTAAGTCAGATTCC +
Preference number: 4 (lower is better)
Translates to: QPRVAGMDRGPRESLRNQFRSSS*DFKSDS
Trigger: GGAATCTGACTTAAAGTCCCAGGAAGACGATCTGAA...TTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp TGTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACTTCAGATCGTCTTCCTaGGACTTTAAGTCAGATTCC +
Preference number: 4 (lower is better)
Translates to: CQPRVAGMDRGPRESLRNFRSSS*DFKSDS
Trigger: GGAATCTGACTTAAAGTCCCAGGAAGACGATCTGAA...GTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp GAGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGAGTTTGCTCCTTGCCTaGTTGATTTCGTCTTGCGTT +
Preference number: 4 (lower is better)
Translates to: ETKIPGKLQAEGSGVARRSLLLA*LISSCV
Trigger: AACGCAAGACGAAATCAACCAGGCAAGGAGCAAACT...CCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp GGCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCCCGAGGCAGTTTGCTCCTTGCCTaGTTGATTTCGTCTTGCGTT +
Preference number: 4 (lower is better)
Translates to: GPEAEDSTYRGEVCKARGSLLLA*LISSCV
Trigger: AACGCAAGACGAAATCAACCAGGCAAGGAGCAAACT...GCCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp TTTCCAGGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGAGTTTGCTCCTTGCCTaGTTGATTTCGTCTTGCGTT +
Preference number: 4 (lower is better)
Translates to: FPGLAAESAHPEQAPESRSLLLA*LISSCV
Trigger: AACGCAAGACGAAATCAACCAGGCAAGGAGCAAACT...CCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGACCTGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp TCCTGCTGCAATCGGTTCAGCTCCGACTTGGCTCGGTTCAGATCGTCTTCCTGGCGGCTTTCATGCAGCTaGGAAAGTTTGCTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: SCCNRFSSDLARFRSSSWRLSCS*ESLLLA
Trigger: GGCAAGGAGCAAACTTTCCCAGCTGCATGAAAGCCG...CCAGGAAGACGATCTGAACCGAGCCAAGTCGGAGCTGAACCGATTGCAGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CCA 90 bp GCCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTCGGCTTTCATGCAGCTaGGAAAGTTTGCTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: ARGRLWKPPHYESTRKESRLSCS*ESLLLA
Trigger: GGCAAGGAGCAAACTTTCCCAGCTGCATGAAAGCCG...ACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp GTAAAAATCTGTCTTTGGAGTTGGGGGAATCACTGGCCACTTGCAAACTGCCACCGCCTTCGCTCAGGTTaGCCAGGTCGGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VKICLWSWGNHWPLANCHRLRSG*PGRSGW
Trigger: CCAGCCTGACCGACCTGGCCAACCTGAGCGAAGGCG...GTGGCAGTTTGCAAGTGGCCAGTGATTCCCCCAACTCCAAAGACAGATTTTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp TGTCCTGGCCCGGCACCGCCAATAGGAAGTGAGACCGGCTCTGAAATCACAGCTAAGGGGTCTTCTGTCTaGAAAGGATCCGGATGCAAC +
Preference number: 4 (lower is better)
Translates to: CPGPAPPIGSETGSEITAKGSSV*KGSGCN
Trigger: GTTGCATCCGGATCCTTTCCAGACAGAAGACCCCTT...AGCTGTGATTTCAGAGCCGGTCTCACTTCCTATTGGCGGTGCCGGGCCAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CCA 90 bp AGTGCATGGCCACAGCGAACTCATCTCGATCCAAGTGCCCATCCTTGTCAATGTGGGCGGTTTAGGCCGTaGAGGAGCAGGTTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: SAWPQRTHLDPSAHPCQCGRFRP*RSRFLR
Trigger: CCGAAGAAACCTGCTCCTCCACGGCCTAAACCGCCC...ACATTGACAAGGATGGGCACTTGGATCGAGATGAGTTCGCTGTGGCCATGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CCA 90 bp AGCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGATCTGCGGAACCAAGCTaGCTTACAGGTGTACTTTTA +
Preference number: 4 (lower is better)
Translates to: SPGCFLSSTDRCVFVPRGSAEPS*LTGVLL
Trigger: TAAAAGTACACCTGTAAGCCAGCTTGGTTCCGCAGA...TCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp GGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCTGGGGCGCTGCTTGCCATTTGGCAACCTCGGATCTaGGAGCCAAGGTCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: GEANSYLKEQHPGALLAIWQPRI*EPRSSG
Trigger: TCCTGAGGACCTTGGCTCCCAGATCCGAGGTTGCCA...AATGGCAAGCAGCGCCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602009.5
CDS-3UTR TCA 90 bp GTGTGGTGTTTAGAGAGCACGAGCGCTCACTCTTATTCCAGGGAGGAAGAGGAAGGGCTGCTGGTGTCGTaGAATTTAGGCGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: VWCLESTSAHSYSREEEEGLLVS*NLGGGM
Trigger: CATGCCACCGCCTAAATTTCACGACACCAGCAGCCC...TTCCTCTTCCTCCCTGGAATAAGAGTGAGCGCTCGTGCTCTCTAAACACCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597937.5
CDS-3UTR TCA 90 bp AGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCACCAGAGAGCAAACCATTaGTGGGCAAGAGGCTTTCAA +
Preference number: 4 (lower is better)
Translates to: RASPGDVTFPGLAAESAHQRANH*WARGFQ
Trigger: TTGAAAGCCTCTTGCCCATCAATGGTTTGCTCTCTG...GTGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp ACAGCGAACTCATCTCGATCCAAGTGCCCATCCTTGTCAATGTCACTGAGGTCCCCTTGTCAATGTCACTaGGGTCCCAGACCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: TANSSRSKCPSLSMSLRSPCQCH*GPRPCP
Trigger: TGGGCAGGGTCTGGGACCTCAGTGACATTGACAAGG...GGACCTCAGTGACATTGACAAGGATGGGCACTTGGATCGAGATGAGTTCGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000592031.5
ENST00000593760.5
ENST00000596037.5
CDS-3UTR TCA 90 bp CACCAAGGAAACATCCAGACATGCGCGGCCCGGCCCATCCGCTCCCGGAACAGCTTACTGACCTTCTGCTaGATGAAATACATAGCTAAC +
Preference number: 4 (lower is better)
Translates to: HQGNIQTCAARPIRSRNSLLTFC*MKYIAN
Trigger: GTTAGCTATGTATTTCATTCAGCAGAAGGTCAGTAA...GCTGTTCCGGGAGCGGATGGGCCGGGCCGCGCATGTCTGGATGTTTCCTTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp GCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTTACTGACCTTCTGCTaGATGAAATACATAGCTAAC +
Preference number: 4 (lower is better)
Translates to: APSGWNGSGASGKSAEPSLLTFC*MKYIAN
Trigger: GTTAGCTATGTATTTCATTCAGCAGAAGGTCAGTAA...GCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR TCA 90 bp GGTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATAGACATCTGCACTCCGGCGAGAGGACTTaGGGAGGGTCGATGCCTTTA +
Preference number: 4 (lower is better)
Translates to: GPWSTVATVCVCIYRHLHSGERT*GGSMPL
Trigger: TAAAGGCATCGACCCTCCTCAAGTCCTCTCGCCGGA...GTGCAGATGTCTATATATACACACACACACCGTCGCCACCGTACTCCAAGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp AGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCACAACTGGGCAATCTCTTaGCTGATGTCATCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: RASPGDVTFPGLAAESAHNWAIS*LMSSSS
Trigger: GGAGCTTGATGACATCAGTCAAGAGATTGCCCAGTT...GTGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp CAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAACAAGGCTTTATTTTTaGAAGGATCATCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: QPRVAGMDRGPRESLRNQTRLYF*KDHPWL
Trigger: GAGCCATGGATGATCCTTTCAAAAATAAAGCCTTGT...TTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR TCA 90 bp CCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGACAAGGCTTTATTTTTaGAAGGATCATCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: PEWLEWIGGLGKVCGTKLTRLYF*KDHPWL
Trigger: GAGCCATGGATGATCCTTTCAAAAATAAAGCCTTGT...CAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR TCA 90 bp CATTTTATACAACGAGTGCATACACCACTGGGGGAGTGTCTGACTGATGCGTGGCTTCCTCTCCTCGACTaGCCGCTGTGTGTTCGTCCC +
Preference number: 4 (lower is better)
Translates to: HFIQRVHTPLGECLTDAWLPLLD*PLCVRP
Trigger: GGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAG...CCACGCATCAGTCAGACACTCCCCCAGTGGTGTATGCACTCGTTGTATAAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR TCA 90 bp ATACTTCCGCAGAGATGGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCCTGCAAGGCCTGGTGTaGACGCGCAAAGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: ILPQRWRAFKTGSERIQALQGLV*TRKVAA
Trigger: TGCTGCCACTTTGCGCGTTCACACCAGGCCTTGCAG...GGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCCATCTCTGCGGAAGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp AGGTCACACCTGTCTTGGTATCAGGGGCTCAAGAGCTCTCAAAAATGTAAGGGGCTGCAAGGCCTGGTGTaGACGCGCAAAGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RSHLSWYQGLKSSQKCKGLQGLV*TRKVAA
Trigger: TGCTGCCACTTTGCGCGTTCACACCAGGCCTTGCAG...CCCCTTACATTTTTGAGAGCTCTTGAGCCCCTGATACCAAGACAGGTGTGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp CTGTCTTTGGAGTTGGGGGAATCACTGGCCACTTGCAAACTGCCACTTCACTGCGACACAAGAGACAGATaGGCTCGCCAGCAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: LSLELGESLATCKLPLHCDTRDR*ARQQCL
Trigger: AAGGCACTGCTGGCGAGCTCATCTGTCTCTTGTGTC...GCAGTGAAGTGGCAGTTTGCAAGTGGCCAGTGATTCCCCCAACTCCAAAGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp AGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCACGGCCACCAGTCTCAGTaGAACATAGAAACCCTGTTT +
Preference number: 4 (lower is better)
Translates to: RASPGDVTFPGLAAESAHGHQSQ*NIETLF
Trigger: AAACAGGGTTTCTATGTTGCACTGAGACTGGTGGCC...GTGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp GCGAACTCATCTCGATCCAAGTGCCCATCCTTGTCAATGTCACTGAGGTCCCAGTTCATGGCCACTCTGTaGACAGGCCACCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: ANSSRSKCPSLSMSLRSQFMATL*TGHQSQ
Trigger: CTGAGACTGGTGGCCTGTGCACAGAGTGGCCATGAA...CTGGGACCTCAGTGACATTGACAAGGATGGGCACTTGGATCGAGATGAGTTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000596037.5
CDS-3UTR GCA 90 bp GGCCATGAACAGATCTGGCGGGTGGGATGTTCTGCTGTCACACCAGGGGACCAGTCATCTCGATCCAAGTaGCCATCCTTGTCAATGTCA +
Preference number: 4 (lower is better)
Translates to: GHEQIWRVGCSAVTPGDQSSRSK*PSLSMS
Trigger: TGACATTGACAAGGATGGGCACTTGGATCGAGATGA...CTGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp TTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCTGGGGCGCTGCTTGCGCTCGGTACACCAAGTaGATGGCCACAGCGAACTCA +
Preference number: 4 (lower is better)
Translates to: FRRGQFLLERATPWGAACARYTK*MATANS
Trigger: TGAGTTCGCTGTGGCCATGCACTTGGTGTACCGAGC...GCAAGCAGCGCCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp CGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCCCGAGGCAGAGGCCTTAACTGTTGGCTGTGTTTaGTTGAGGCTGTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: RRTQLTEVKSAKPEAEALTVGCV*LRLCLG
Trigger: CCCCAAGCACAGCCTCAAGCAAACACAGCCAACAGT...TAAGGCCTCTGCCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp AAACTGATCCAATTTTGGTTAAGTTTGAGAAGCCCTCTGAACTTGGGTGGTTGGTGTCCGGGCCGGGCGTaGCTCTCTCCGAAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: KLIQFWLSLRSPLNLGGWCPGRA*LSPKAG
Trigger: TCCCGCCTTCGGAGAGAGGCACGCCCGGCCCGGACA...CCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAACCAAAATTGGATCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GCAAAGCCCGAGGCAGAGGCCTTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATCGAGCTCCTGCAAACTaGTTGTTTCCCGGTCTAGGT +
Preference number: 4 (lower is better)
Translates to: AKPEAEALEGLAAEEGTNRAPAN*LFPGLG
Trigger: ACCTAGACCGGGAAACAAGCAGTTTGCAGGAGCTCG...ATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAAGGCCTCTGCCTCGGGCTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR GCA 90 bp TTCTCGGAATCTGTGTTCTGTGATCACAAGTTGCGACCGCTGCCAACCCCAAGAAAAACTGCCCCTCTCTaGCAGGGAGACGCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: FSESVFCDHKLRPLPTPRKTAPL*QGDAFA
Trigger: AGCGAAGGCGTCTCCCTGGCAGAGAGGGGCAGTTTT...TCTTGGGGTTGGCAGCGGTCGCAACTTGTGATCACAGAACACAGATTCCGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR GCA 90 bp GGCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCCCGAGGCTCCGGATGCAACTCTTaGGTGTTGTTGCTAAATAAC +
Preference number: 4 (lower is better)
Translates to: GPEAEDSTYRGEVCKARGSGCNS*VLLLNN
Trigger: GTTATTTAGCAACAACACGCAAGAGTTGCATCCGGA...GCCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp GCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAATCCGGATGCAACTCTTaGGTGTTGTTGCTAAATAAC +
Preference number: 4 (lower is better)
Translates to: ALGASSPRLTAVCSSPEESGCNS*VLLLNN
Trigger: GTTATTTAGCAACAACACGCAAGAGTTGCATCCGGA...TTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp GCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCCCGAGGCATCTGTTGAAGTTGTCTaGTGTTCTGCAAAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: ARRRRTQLTEVKSAKPEASVEVV*CSAKGS
Trigger: TGACCCCTTTGCAGAACAGCAGACAACTTCAACAGA...TGCCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp ACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTAATTTTATACAACGAGTaGATACACCACTGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: TSPRVPVLGVRWRRCVCVILYNE*IHHWGS
Trigger: ACTCCCCCAGTGGTGTATGCACTCGTTGTATAAAAT...TACACACACACACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR GCA 90 bp GCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAATTTTATACAACGAGTaGATACACCACTGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: ALGASSPRLTAVCSSPEEILYNE*IHHWGS
Trigger: ACTCCCCCAGTGGTGTATGCACTCGTTGTATAAAAT...TTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR GCA 90 bp GGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAGAGCGGATTTTATACAACGAGTaGATACACCACTGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: GASSPRLTAVCSSPEEERILYNE*IHHWGS
Trigger: ACTCCCCCAGTGGTGTATGCACTCGTTGTATAAAAT...CCGCTCTTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR GCA 90 bp GGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCTTGGACTTTGTTGGAAACATCCAGACATaGGCGGCCCGGCCCATCCGC +
Preference number: 4 (lower is better)
Translates to: GGHSKQVLKGSRPILDFVGNIQT*AARPIR
Trigger: GCGGATGGGCCGGGCCGCGCATGTCTGGATGTTTCC...AACAAAGTCCAAGATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GTAAAAATCTGTCTTTGGAGTTGGGGGAATCACTGGCCACTTGCAAACTGCCACCAGCACGGAGAGAGCTaGTGGAGGCAGCAGAGCACC +
Preference number: 4 (lower is better)
Translates to: VKICLWSWGNHWPLANCHQHGES*WRQQST
Trigger: GGTGCTCTGCTGCCTCCAGCAGCTCTCTCCGTGCTG...GTGGCAGTTTGCAAGTGGCCAGTGATTCCCCCAACTCCAAAGACAGATTTTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp CGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCAGGGGCAGACTCTGGTACAATCTCAGCTCACTaGAACTTCCGACTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: RNGKLHVPRFEAAGADSGTISAH*NFRLPG
Trigger: ACCTGGGAGTCGGAAGTTGCAGTGAGCTGAGATTGT...ACCAGAGTCTGCCCCTGCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602009.5
CDS-3UTR GCA 90 bp GTGTGGTGTTTAGAGAGCACGAGCGCTCACTCTTATTCCAGGGAGGAAGAGGAAGTCCTTCGTCCTAGCTaGTGCCTGAGTGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: VWCLESTSAHSYSREEEEVLRPS*CLSVAG
Trigger: TCCTGCCACACTCAGGCAGCAGCTAGGACGAAGGAC...TTCCTCTTCCTCCCTGGAATAAGAGTGAGCGCTCGTGCTCTCTAAACACCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602009.5
CDS-3UTR CCA 90 bp CGGAACAGCACCAAGACGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCCTCAAGGTAACTTCATaGCCACTCTGTGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: RNSTKTKWETTCPQVRGCLKVTS*PLCAQA
Trigger: GGCCTGTGCACAGAGTGGCCATGAAGTTACCTTGAG...GCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCGTCTTGGTGCTGTTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597937.5
CDS-3UTR CCA 90 bp AAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGTGAAATTTAGGCGGTaGCATGCTCAAATTCAGATT +
Preference number: 4 (lower is better)
Translates to: KNPREAASGREWGGPEAEVKFRR*HAQIQI
Trigger: AATCTGAATTTGAGCATGCCACCGCCTAAATTTCAC...CTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp CAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGTGAAATTTAGGCGGTaGCATGCTCAAATTCAGATT +
Preference number: 4 (lower is better)
Translates to: QPRVAGMDRGPRESLRNQVKFRR*HAQIQI
Trigger: AATCTGAATTTGAGCATGCCACCGCCTAAATTTCAC...TTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp TCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAGTGAAATTTAGGCGGTaGCATGCTCAAATTCAGATT +
Preference number: 4 (lower is better)
Translates to: SAPSGWNGSGASGKSAEPVKFRR*HAQIQI
Trigger: AATCTGAATTTGAGCATGCCACCGCCTAAATTTCAC...TGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp GAGGCCTTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATGGGTCTTTTCCACTACTTTCTCTTGGAGGGTaGGATGAGGGACGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: EALEGLAAEEGTNGSFPLLSLGG*DEGRGQ
Trigger: CTGCCCCCGTCCCTCATCCCACCCTCCAAGAGAAAG...TAGTGGAAAAGACCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAAGGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR CCA 90 bp CAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTACCATGCCGTGGGACGGCGTaGAGCGGAGGCTGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: QKWQCRINNARDRECEVPCRGTA*SGGCLL
Trigger: CAAAAGACAGCCTCCGCTCCACGCCGTCCCACGGCA...TGGTACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp GAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCCCGAGGCAGAGGCCTTAGATGTGCTAGAAGGTTCTaGGTGAGGCCCGAGTGCATG +
Preference number: 4 (lower is better)
Translates to: EDSTYRGEVCKARGRGLRCARRF*VRPECM
Trigger: CATGCACTCGGGCCTCACCCAGAACCTTCTAGCACA...TCTAAGGCCTCTGCCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp GGCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCCCGAGGCTTCAGATCGTCTTCCTaGGACTTTAAGTCAGATTCC +
Preference number: 4 (lower is better)
Translates to: GPEAEDSTYRGEVCKARGFRSSS*DFKSDS
Trigger: GGAATCTGACTTAAAGTCCCAGGAAGACGATCTGAA...GCCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp GGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGGAGGCTCCATCGAGCACCTaGTCATACTGCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GGYGNHLITSPREKRVWEAPSST*SYCSRL
Trigger: GAGCCTGGAGCAGTATGACCAGGTGCTCGATGGAGC...CTCCCATACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp CCGGCACCGCCAATAGGAAGTGAGACCGGCTCTGAAATCACAGCTGCATGTGTGGGCAGAGCCACGGAATaGGTCACTTTCTTTGAAAGG +
Preference number: 4 (lower is better)
Translates to: PAPPIGSETGSEITAACVGRATE*VTFFER
Trigger: CCTTTCAAAGAAAGTGACCCATTCCGTGGCTCTGCC...CACACATGCAGCTGTGATTTCAGAGCCGGTCTCACTTCCTATTGGCGGTGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CCA 90 bp CCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGTGGATCCGAGGTAAATaGGTCATTCTTTGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: PEWLEWIGGLGKVCGTKLWIRGK*VILCLF
Trigger: AAACAGACAAAGAATGACCCATTTACCTCGGATCCA...CAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CCA 90 bp GTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATAGACATCTGCACTGGGCGGTTTAGGCCGTaGAGGAGCAGGTTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: VLGVRWRRCVCVYIDICTGRFRP*RSRFLR
Trigger: CCGAAGAAACCTGCTCCTCCACGGCCTAAACCGCCC...AGTGCAGATGTCTATATATACACACACACACCGTCGCCACCGTACTCCAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455140.7
CDS-3UTR CCA 90 bp CAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTACCACCCGAGTGGCTGGAATaGATCGGGGGCCTCGGGAAA +
Preference number: 4 (lower is better)
Translates to: QKWQCRINNARDRECEVPPEWLE*IGGLGK
Trigger: TTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG...TGGTACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp GTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATAGACATCTGCACTTGTCTGACTGATGCGTaGGAGGGCGGGTGGGGATGT +
Preference number: 4 (lower is better)
Translates to: VLGVRWRRCVCVYIDICTCLTDA*EGGWGC
Trigger: ACATCCCCACCCGCCCTCCCACGCATCAGTCAGACA...AGTGCAGATGTCTATATATACACACACACACCGTCGCCACCGTACTCCAAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CCA 90 bp GGCCATGAACAGATCTGGCGGGTGGGATGTTCTGCTGTCACACCAGGGGACCAGATTCAACCTTTACCATaGCTCCAAAACTGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: GHEQIWRVGCSAVTPGDQIQPLP*LQNCPS
Trigger: AGAGGGGCAGTTTTGGAGCCATGGTAAAGGTTGAAT...CTGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp CTGGAACCAACGTTGGCCATGAACAGATCTGGCGGGTGGGATGTTCTGCTGTCAAACAGATCTGGCGGGTaGGATGTTCTGCTGTCACAC +
Preference number: 4 (lower is better)
Translates to: LEPTLAMNRSGGWDVLLSNRSGG*DVLLSH
Trigger: GTGTGACAGCAGAACATCCCACCCGCCAGATCTGTT...TGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCCAACGTTGGTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp GGGGGAATCACTGGCCACTTGCAAACTGCCACTTCACTGCCAACTTTTATCCAAACAGCCGCCTGCACTTaGCTGGAACCAACGTTGGCC +
Preference number: 4 (lower is better)
Translates to: GGITGHLQTATSLPTFIQTAACT*LEPTLA
Trigger: GGCCAACGTTGGTTCCAGCCAAGTGCAGGCGGCTGT...TTGGATAAAAGTTGGCAGTGAAGTGGCAGTTTGCAAGTGGCCAGTGATTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp AACAGCACCAAGACGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCAGGGAAAGAGCAACACCCTaGGGCGCTGCTTGCCATTAC +
Preference number: 4 (lower is better)
Translates to: NSTKTKWETTCPQVRGCRERATP*GAACHY
Trigger: GTAATGGCAAGCAGCGCCCCAGGGTGTTGCTCTTTC...CCTGCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCGTCTTGGTGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp GGGGGAATCACTGGCCACTTGCAAACTGCCACTTCACTGCCAACTTTTATCCAACACGGAGAGAGCTGCTaGAGGCAGCAGAGCACCAAG +
Preference number: 4 (lower is better)
Translates to: GGITGHLQTATSLPTFIQHGESC*RQQSTK
Trigger: CTTGGTGCTCTGCTGCCTCCAGCAGCTCTCTCCGTG...TTGGATAAAAGTTGGCAGTGAAGTGGCAGTTTGCAAGTGGCCAGTGATTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp AACAGATCTGGCGGGTGGGATGTTCTGCTGTCACACCAGGGGACCAGAGCCCCAAAGGAAATAACGTTATaGCAACCTCGGATCTGGGAG +
Preference number: 4 (lower is better)
Translates to: NRSGGWDVLLSHQGTRAPKEITL*QPRIWE
Trigger: CTCCCAGATCCGAGGTTGCCATAACGTTATTTCCTT...TGGGGCTCTGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGCCAGATCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602009.5
3UTR CAA 72 bp TGGGTTTCCTCCTGCTGCAATCGGTTCAGCTCCGACTaGGCTCGGTTCAGATCGTCTTCCTGGGACTTTAAG +
Preference number: 4 (lower is better)
Translates to: WVSSCCNRFSSD*ARFRSSSWDFK
Trigger: CTTAAAGTCCCAGGAAGACGATCTGAACCGAGCCAAGTCGGAGCTGAACCGATTGCAGCAGGAGGAAACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR TCA 90 bp CATTTTATACAACGAGTGCATACACCACTGGGGGAGTGTCTGACTGATGCGTGGGGGCTGCTGGTGTCGTaGAATTTAGGCGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: HFIQRVHTPLGECLTDAWGLLVS*NLGGGM
Trigger: CATGCCACCGCCTAAATTTCACGACACCAGCAGCCC...CCACGCATCAGTCAGACACTCCCCCAGTGGTGTATGCACTCGTTGTATAAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp CTTCTCCAGGGCTCGGTACACCAAGTGCATGGCCACAGCGAACTCATCTCGATCCAGAGAGCAAACCATTaGTGGGCAAGAGGCTTTCAA +
Preference number: 4 (lower is better)
Translates to: LLQGSVHQVHGHSELISIQRANH*WARGFQ
Trigger: TTGAAAGCCTCTTGCCCATCAATGGTTTGCTCTCTG...GATCGAGATGAGTTCGCTGTGGCCATGCACTTGGTGTACCGAGCCCTGGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000593760.5
CDS-3UTR TCA 90 bp TTTTTACTTTGGAACGGGTCGCCGCTGTCAGCCCCGAGTGGCTGGAATGGATCGATCAAGAGGCAGCTTTaGGTTCATGAGGACTGGCTT +
Preference number: 4 (lower is better)
Translates to: FLLWNGSPLSAPSGWNGSIKRQL*VHEDWL
Trigger: AAGCCAGTCCTCATGAACTCAAAGCTGCCTCTTGAT...CGATCCATTCCAGCCACTCGGGGCTGACAGCGGCGACCCGTTCCAAAGTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR TCA 90 bp GAGGCCTTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATGGGTCTTTTCCACTACCTTGTCAATGTCACTaGGGTCCCAGACCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: EALEGLAAEEGTNGSFPLPCQCH*GPRPCP
Trigger: TGGGCAGGGTCTGGGACCTCAGTGACATTGACAAGG...TAGTGGAAAAGACCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAAGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR TCA 90 bp CCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGTTACTGACCTTCTGCTaGATGAAATACATAGCTAAC +
Preference number: 4 (lower is better)
Translates to: PSGWNGSGASGKSAEPSWLLTFC*MKYIAN
Trigger: GTTAGCTATGTATTTCATTCAGCAGAAGGTCAGTAA...CCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR TCA 90 bp GCCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTGGGCAATCTCTTGACTaGTGTCATCAAGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: ARGRLWKPPHYESTRKESGQSLD*CHQAPS
Trigger: TGAAGGAGCTTGATGACATCAGTCAAGAGATTGCCC...ACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp CGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCAGGGGCAGACTCTGGTAGTGATGAGATCATCTaGGTCTCATCCTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: RNGKLHVPRFEAAGADSGSDEII*VSSWHF
Trigger: GAAGTGCCAGGATGAGACTCAGATGATCTCATCACT...ACCAGAGTCTGCCCCTGCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp GGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCTTGGACTTTGTTTGGACTCGCCCAGCCTaGATGCTCTGCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GGHSKQVLKGSRPILDFVWTRPA*MLCSSW
Trigger: CCAGCTGGAGCAGAGCATTCAGGCTGGGCGAGTCCA...AACAAAGTCCAAGATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp CCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATGATTTCGTCTTGCGTTaGCTTCAGGGACTTGATGAT +
Preference number: 4 (lower is better)
Translates to: PPSPGPWSTVATVCVCIYDFVLR*LQGLDD
Trigger: ATCATCAAGTCCCTGAAGTCAACGCAAGACGAAATC...ATATATACACACACACACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp GCCTCTGTAAGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGGATTTCGTCTTGCGTTaGCTTCAGGGACTTGATGAT +
Preference number: 4 (lower is better)
Translates to: ASVRASPGDVTFPGLAAEDFVLR*LQGLDD
Trigger: ATCATCAAGTCCCTGAAGTCAACGCAAGACGAAATC...CTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCTTACAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp AAGGAAGAGGAGTCCACTTGCGACAACCAGAAACGACCAGGACGCCTGAGGGACATGGGTCACTTTCTTTaGAAGGGTCCCCTCCAAATG +
Preference number: 4 (lower is better)
Translates to: KEEESTCDNQKRPGRLRDMGHFL*KGPLQM
Trigger: CATTTGGAGGGGACCCTTTCAAAGAAAGTGACCCAT...GTCCCTCAGGCGTCCTGGTCGTTTCTGGTTGTCGCAAGTGGACTCCTCTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR TCA 90 bp GGCCATGAACAGATCTGGCGGGTGGGATGTTCTGCTGTCACACCAGGGGACCAGCCTTGGTTTCCAAAGTaGACATATACCCTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: GHEQIWRVGCSAVTPGDQPWFPK*TYTLKE
Trigger: TTCCTTCAGGGTATATGTTCACTTTGGAAACCAAGG...CTGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602009.5
CDS-3UTR TCA 90 bp CCGGCACCGCCAATAGGAAGTGAGACCGGCTCTGAAATCACAGCTGCATGTGTGGCACACACGCGTCTTTaGAAACCTGAACAGAATCTC +
Preference number: 4 (lower is better)
Translates to: PAPPIGSETGSEITAACVAHTRL*KPEQNL
Trigger: GAGATTCTGTTCAGGTTTTCAAAGACGCGTGTGTGC...CACACATGCAGCTGTGATTTCAGAGCCGGTCTCACTTCCTATTGGCGGTGCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR TCA 90 bp AGTCCCAAACCGTGTCACAGCGTGGCATATGAGGGATGGAGGCCTTCTCCGTGTTGTCATGAAGGCAGCTaGTGGAACGCTGGAATCAAA +
Preference number: 4 (lower is better)
Translates to: SPKPCHSVAYEGWRPSPCCHEGS*WNAGIK
Trigger: TTTGATTCCAGCGTTCCATCAGCTGCCTTCATGACA...ACACGGAGAAGGCCTCCATCCCTCATATGCCACGCTGTGACACGGTTTGGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR TCA 90 bp AGGTCCCAGACCCTGCCCAGGACATCAAGAGGCAGCTTTGAGTTCATGAGGACTATAGGTGGGTGGGTTTaGAATTTAGGCGGTGGCATG +
Preference number: 4 (lower is better)
Translates to: RSQTLPRTSRGSFEFMRTIGGWV*NLGGGM
Trigger: CATGCCACCGCCTAAATTTCAAACCCACCCACCTAT...AGTCCTCATGAACTCAAAGCTGCCTCTTGATGTCCTGGGCAGGGTCTGGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596037.5
CDS-3UTR GCA 90 bp CTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATAGACATCTGCACTGCCCACCCTCCCTGTGTATaGCGGATCGACCTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: LGVRWRRCVCVYIDICTAHPPCV*RIDLLV
Trigger: TACAAGCAGGTCGATCCGGCATACACAGGGAGGGTG...GGCAGTGCAGATGTCTATATATACACACACACACCGTCGCCACCGTACTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp GGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGGAGGCTCGGTACACCAAGTaGATGGCCACAGCGAACTCA +
Preference number: 4 (lower is better)
Translates to: GGYGNHLITSPREKRVWEARYTK*MATANS
Trigger: TGAGTTCGCTGTGGCCATGCACTTGGTGTACCGAGC...CTCCCATACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GAGGCCTTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATGGGTCTTTTCCACTAGTTTGCTTGAGGCTGTaGTTGGGGGACAGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: EALEGLAAEEGTNGSFPLVCLRL*LGDRLP
Trigger: AGGGAGCCTGTCCCCCAAGCACAGCCTCAAGCAAAC...TAGTGGAAAAGACCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAAGGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR GCA 90 bp TGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATAGACATCTGCACTGCCCCAAATCGCATCTTGTCTaGCACGGGCACCACCCAGTT +
Preference number: 4 (lower is better)
Translates to: WSTVATVCVCIYRHLHCPKSHLV*HGHHPV
Trigger: AACTGGGTGGTGCCCGTGGCAGACAAGATGCGATTT...GGGGCAGTGCAGATGTCTATATATACACACACACACCGTCGCCACCGTACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp AACAGCACCAAGACGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCAGGAAATCGCATCTTGTCTaGCACGGGCACCACCCAGTT +
Preference number: 4 (lower is better)
Translates to: NSTKTKWETTCPQVRGCRKSHLV*HGHHPV
Trigger: AACTGGGTGGTGCCCGTGGCAGACAAGATGCGATTT...CCTGCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCGTCTTGGTGCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATAGACATCTGCACTCTTAACTTCCCCGTTTaGCTCGTATCGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VLGVRWRRCVCVYIDICTLNFPV*LVSARA
Trigger: GGCCCTGGCCGATACGAGGCAAACGGGGAAGTTAAG...AGTGCAGATGTCTATATATACACACACACACCGTCGCCACCGTACTCCAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp GGGGGAATCACTGGCCACTTGCAAACTGCCACTTCACTGCCAACTTTTATCCAACCATGGCTCCAAAACTaGCCCTCTCTGCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: GGITGHLQTATSLPTFIQPWLQN*PSLPGR
Trigger: TCTCCCTGGCAGAGAGGGGCAGTTTTGGAGCCATGG...TTGGATAAAAGTTGGCAGTGAAGTGGCAGTTTGCAAGTGGCCAGTGATTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp AGCCTCCCAAAGGAAGAGGAGTCCACTTGCGACAACCAGAAACGACCAGGACGCTGGAAAGGATCCGGATaGAACTCTTGCGTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: SLPKEEESTCDNQKRPGRWKGSG*NSCVLL
Trigger: CAACAACACGCAAGAGTTGCATCCGGATCCTTTCCA...GCGTCCTGGTCGTTTCTGGTTGTCGCAAGTGGACTCCTCTTCCTTTGGGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR GCA 90 bp GTAAAAATCTGTCTTTGGAGTTGGGGGAATCACTGGCCACTTGCAAACTGCCACGCGGGTGGGATGTTCTaGTGTCACACCAGGGGACCA +
Preference number: 4 (lower is better)
Translates to: VKICLWSWGNHWPLANCHAGGMF*CHTRGP
Trigger: TGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGC...GTGGCAGTTTGCAAGTGGCCAGTGATTCCCCCAACTCCAAAGACAGATTTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp TTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCTGGGGCGCTGCTTGCCCCTGGGGCGCTGCTTaGCATTACTTCCTCATCTTT +
Preference number: 4 (lower is better)
Translates to: FRRGQFLLERATPWGAACPWGAA*HYFLIF
Trigger: AAAGATGAGGAAGTAATGGCAAGCAGCGCCCCAGGG...GCAAGCAGCGCCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp AGGTCACACCTGTCTTGGTATCAGGGGCTCAAGAGCTCTCAAAAATGTAAGGGGCCCAGGGGACGCGTGTaGTTCCCCATAAATCCTTGG +
Preference number: 4 (lower is better)
Translates to: RSHLSWYQGLKSSQKCKGPRGRV*FPINPW
Trigger: CCAAGGATTTATGGGGAAGCACACGCGTCCCCTGGG...CCCCTTACATTTTTGAGAGCTCTTGAGCCCCTGATACCAAGACAGGTGTGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GAACGCTGGAATCAAAACAAGATAGTATTGGAGACCCATTTTCCACAGCTCTGTCCCCTGCCTGGGGGCTaGCGAGAAGGGACAGAGTGG +
Preference number: 4 (lower is better)
Translates to: ERWNQNKIVLETHFPQLCPLPGG*REGTEW
Trigger: CCACTCTGTCCCTTCTCGGCAGCCCCCAGGCAGGGG...ACAGAGCTGTGGAAAATGGGTCTCCAATACTATCTTGTTTTGATTCCAGCGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CCA 90 bp GTGAAGTCTGCAAAGCCCGAGGCAGAGGCCTTAGAAGGTTTAGCTGCAGAGGAGACAACGAATTTCCAGTaGGAATCTGCTGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: VKSAKPEAEALEGLAAEETTNFQ*ESAGRG
Trigger: CCCTCTCCCAGCAGATTCCCACTGGAAATTCGTTGT...CTCCTCTGCAGCTAAACCTTCTAAGGCCTCTGCCTCGGGCTTTGCAGACTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR CCA 90 bp GAGAAACTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACCTGCTGACGCTGCCGTaGGACGGCGTGGAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: EKLFFLQKWQCRINNARDLLTLP*DGVERR
Trigger: CCTCCGCTCCACGCCGTCCCACGGCAGCGTCAGCAG...GTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAGTTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp AACAGATCTGGCGGGTGGGATGTTCTGCTGTCACACCAGGGGACCAGAGCCCCAATAGCTAACGCGAATTaGTCTTTGCTTAACTTCCCC +
Preference number: 4 (lower is better)
Translates to: NRSGGWDVLLSHQGTRAPIANAN*SLLNFP
Trigger: GGGGAAGTTAAGCAAAGACCAATTCGCGTTAGCTAT...TGGGGCTCTGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGCCAGATCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp GTGTGGTGTTTAGAGAGCACGAGCGCTCACTCTTATTCCAGGGAGGAAGAGGAAGCATGTCTCGGAGCTTaGCCTTCTGCTGGTCCATCT +
Preference number: 4 (lower is better)
Translates to: VWCLESTSAHSYSREEEEACLGA*PSAGPS
Trigger: AGATGGACCAGCAGAAGGCCAAGCTCCGAGACATGC...TTCCTCTTCCTCCCTGGAATAAGAGTGAGCGCTCGTGCTCTCTAAACACCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp GAGGCCTTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATGGGTCTTTTCCACTAGCTCCATCGAGCACCTaGTCATACTGCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: EALEGLAAEEGTNGSFPLAPSST*SYCSRL
Trigger: GAGCCTGGAGCAGTATGACCAGGTGCTCGATGGAGC...TAGTGGAAAAGACCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAAGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR CCA 90 bp GGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCTTGGACTTTGTTCCAGGTCGGTCAGGCTaGCACCATGGGCTCCATCGA +
Preference number: 4 (lower is better)
Translates to: GGHSKQVLKGSRPILDFVPGRSG*HHGLHR
Trigger: TCGATGGAGCCCATGGTGCCAGCCTGACCGACCTGG...AACAAAGTCCAAGATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp AGTGGGGTGGCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGAGGGTTTTTCGTGAATaGATCCGAGGTAAATGGGTC +
Preference number: 4 (lower is better)
Translates to: SGVARRRRTQLTEVKSAKRVFRE*IRGKWV
Trigger: GACCCATTTACCTCGGATCCATTCACGAAAAACCCT...CTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGCCACCCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp GGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCTGGGGCGCTGCTTGCCATTAGTTGGGGGAATCACTaGCCACTTGCAAACTGCCAC +
Preference number: 4 (lower is better)
Translates to: GEANSYLKEQHPGALLAISWGNH*PLANCH
Trigger: GTGGCAGTTTGCAAGTGGCCAGTGATTCCCCCAACT...AATGGCAAGCAGCGCCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp TTCCGCAGAGATGGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCTACCTCCCGAGTAGCTaGGATCACAGGCATGCGCCA +
Preference number: 4 (lower is better)
Translates to: FRRDGGHSKQVLKGSRPIYLPSS*DHRHAP
Trigger: TGGCGCATGCCTGTGATCCCAGCTACTCGGGAGGTA...GATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCCATCTCTGCGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602009.5
CDS-3UTR CCA 90 bp TTCTCGGAATCTGTGTTCTGTGATCACAAGTTGCGACCGCTGCCAACCCCAAGAAACCGTGTCACAGCGTaGCATATGAGGGATGGAGGC +
Preference number: 4 (lower is better)
Translates to: FSESVFCDHKLRPLPTPRNRVTA*HMRDGG
Trigger: GCCTCCATCCCTCATATGCCACGCTGTGACACGGTT...TCTTGGGGTTGGCAGCGGTCGCAACTTGTGATCACAGAACACAGATTCCGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR CAA 72 bp AGGTCGGTCTTCAGGAATATCTCATCAAATCGCATCTaGTCTGCCACGGGCACCACCCAGTTCACTGTTGGC +
Preference number: 4 (lower is better)
Translates to: RSVFRNISSNRI*SATGTTQFTVG
Trigger: GCCAACAGTGAACTGGGTGGTGCCCGTGGCAGACAAGATGCGATTTGATGAGATATTCCTGAAGACCGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR TCA 90 bp CTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGCTGCAGAGGGCGGTGTaGCCATCAGAGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LFFLQKWQCRINNARDRELQRAV*PSEGCW
Trigger: CCAGCAGCCCTCTGATGGTCACACCGCCCTCTGCAG...CTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp AGGTCACACCTGTCTTGGTATCAGGGGCTCAAGAGCTCTCAAAAATGTAAGGGGTTGGCTGTGTTTGCTTaGGGCTGTGCTTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: RSHLSWYQGLKSSQKCKGLAVFA*GCAWGT
Trigger: TGTCCCCCAAGCACAGCCTCAAGCAAACACAGCCAA...CCCCTTACATTTTTGAGAGCTCTTGAGCCCCTGATACCAAGACAGGTGTGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp AAACATAACCAAAATTTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCGGAGCCGAGAGAGCCTaGACTGTCCGGGCCGGGCGT +
Preference number: 4 (lower is better)
Translates to: KHNQNFRRGQFLLERATPGAERA*TVRAGR
Trigger: ACGCCCGGCCCGGACAGTTCAGGCTCTCTCGGCTCC...GGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAAATTTTGGTTATGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp TTCTCGGAATCTGTGTTCTGTGATCACAAGTTGCGACCGCTGCCAACCCCAAGAAGCCTTCAGCACTATTaGAGGACCCACTTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: FSESVFCDHKLRPLPTPRSLQHY*RTHFRR
Trigger: CCTTCGGAAGTGGGTCCTTCAATAGTGCTGAAGGCT...TCTTGGGGTTGGCAGCGGTCGCAACTTGTGATCACAGAACACAGATTCCGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR TCA 90 bp GGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCTTGGACTTTGTTGTAGGAGCCGGGTTGTaGGACGGAAACACACACGCC +
Preference number: 4 (lower is better)
Translates to: GGHSKQVLKGSRPILDFVVGAGL*DGNTHA
Trigger: GGCGTGTGTGTTTCCGTCTCACAACCCGGCTCCTAC...AACAAAGTCCAAGATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp AGGTCACACCTGTCTTGGTATCAGGGGCTCAAGAGCTCTCAAAAATGTAAGGGGGAGAGCACACCTGTGTaGATGTCCAGACCGAGCTCT +
Preference number: 4 (lower is better)
Translates to: RSHLSWYQGLKSSQKCKGESTPV*MSRPSS
Trigger: AGAGCTCGGTCTGGACATTCACACAGGTGTGCTCTC...CCCCTTACATTTTTGAGAGCTCTTGAGCCCCTGATACCAAGACAGGTGTGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000602009.5
CDS-3UTR TCA 90 bp TTCTCGGAATCTGTGTTCTGTGATCACAAGTTGCGACCGCTGCCAACCCCAAGAGCTGTACAAGTGTCATaGAGGCAGCTGATGGAACGC +
Preference number: 4 (lower is better)
Translates to: FSESVFCDHKLRPLPTPRAVQVS*RQLMER
Trigger: GCGTTCCATCAGCTGCCTTCATGACACTTGTACAGC...TCTTGGGGTTGGCAGCGGTCGCAACTTGTGATCACAGAACACAGATTCCGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR GCA 90 bp AGGAGCAGGTTTCTTCGGAGGCAGAGCAGGAGTGTCCTGTTTACTTTTAAAGGGCACCCTCCCTGTGTATaGCGGATCGACCTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: RSRFLRRQSRSVLFTFKGHPPCV*RIDLLV
Trigger: TACAAGCAGGTCGATCCGGCATACACAGGGAGGGTG...CCCTTTAAAAGTAAACAGGACACTCCTGCTCTGCCTCCGAAGAAACCTGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR GCA 90 bp TTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTAAGCCCAGTGGGCCTCTaGAGAGGGCGGTGTGACCAT +
Preference number: 4 (lower is better)
Translates to: LQKWQCRINNARDRECEVSPVGL*RGRCDH
Trigger: ATGGTCACACCGCCCTCTGCAGAGGCCCACTGGGCT...TACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp GGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGGAGAAATCGCATCTTGTCTaGCACGGGCACCACCCAGTT +
Preference number: 4 (lower is better)
Translates to: GGYGNHLITSPREKRVWEKSHLV*HGHHPV
Trigger: AACTGGGTGGTGCCCGTGGCAGACAAGATGCGATTT...CTCCCATACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp TTCCGCAGAGATGGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCTGGGTGAGGCCCGAGTaGATGAAGATCTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: FRRDGGHSKQVLKGSRPIWVRPE*MKISFT
Trigger: GGTGAAGGAGATCTTCATGCACTCGGGCCTCACCCA...GATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCCATCTCTGCGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp TTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATGGGTCTTTTCCACTAAACGGGCTTAACTTCCCCGTTTaGCTCGTATCGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LEGLAAEEGTNGSFPLNGLNFPV*LVSARA
Trigger: GGCCCTGGCCGATACGAGGCAAACGGGGAAGTTAAG...CCCGTTTAGTGGAAAAGACCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR GCA 90 bp GGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGGAGCGAGCTCCTGCAAACTaGTTGTTTCCCGGTCTAGGT +
Preference number: 4 (lower is better)
Translates to: GGYGNHLITSPREKRVWERAPAN*LFPGLG
Trigger: ACCTAGACCGGGAAACAAGCAGTTTGCAGGAGCTCG...CTCCCATACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCTTGGACTTTGTTCGGAGCTTGGCCTTCTaGTGGTCCATCTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GGHSKQVLKGSRPILDFVRSLAF*WSISSR
Trigger: CCTGGACGAGATGGACCAGCAGAAGGCCAAGCTCCG...AACAAAGTCCAAGATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp ATACTTCCGCAGAGATGGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCAGCTGGGTTTCCTCCTaGTGCAATCGGTTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ILPQRWRAFKTGSERIQASWVSS*CNRFSS
Trigger: GGAGCTGAACCGATTGCAGCAGGAGGAAACCCAGCT...GGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCCATCTCTGCGGAAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp CAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTACCACTCGCCCAGCCTGAATaGTCTGCTCCAGCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: QKWQCRINNARDRECEVPLAQPE*SAPAGF
Trigger: AAACCCAGCTGGAGCAGAGCATTCAGGCTGGGCGAG...TGGTACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp CCGGCACCGCCAATAGGAAGTGAGACCGGCTCTGAAATCACAGCTGCATGTGTGTCTGTTGAAGTTGTCTaGTGTTCTGCAAAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: PAPPIGSETGSEITAACVSVEVV*CSAKGS
Trigger: TGACCCCTTTGCAGAACAGCAGACAACTTCAACAGA...CACACATGCAGCTGTGATTTCAGAGCCGGTCTCACTTCCTATTGGCGGTGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR GCA 90 bp GGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGATACACATAGACACATaGCCCTCAGATGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: GGGYGNHLITSPREKRVWIHIDT*PSDVPC
Trigger: GCAGGGGACATCTGAGGGGCATGTGTCTATGTGTAT...CCATACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp TTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCTGGGGCGCTGCTTGCATACACATAGACACATaGCCCTCAGATGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: FRRGQFLLERATPWGAACIHIDT*PSDVPC
Trigger: GCAGGGGACATCTGAGGGGCATGTGTCTATGTGTAT...GCAAGCAGCGCCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp AGGTCACACCTGTCTTGGTATCAGGGGCTCAAGAGCTCTCAAAAATGTAAGGGGGGTGCCAGGGGACAATaGCAGATGGGGAAAGTAGGA +
Preference number: 4 (lower is better)
Translates to: RSHLSWYQGLKSSQKCKGGARGQ*QMGKVG
Trigger: TCCTACTTTCCCCATCTGGCATTGTCCCCTGGCACC...CCCCTTACATTTTTGAGAGCTCTTGAGCCCCTGATACCAAGACAGGTGTGACCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GTGTGGTGTTTAGAGAGCACGAGCGCTCACTCTTATTCCAGGGAGGAAGAGGAAACAAGCCAAAAGCGGTaGCAGGGGACAATGCCAGAT +
Preference number: 4 (lower is better)
Translates to: VWCLESTSAHSYSREEEETSQKR*QGTMPD
Trigger: ATCTGGCATTGTCCCCTGGCACCGCTTTTGGCTTGT...TTCCTCTTCCTCCCTGGAATAAGAGTGAGCGCTCGTGCTCTCTAAACACCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp AAACAGAGCTGCAAGGTCAGGGTTGAGCTCAGAATGCGGCTGTACAAGTGTCATACAAGTTGCGACCGCTaGCAACCCCAAGATGCTCAG +
Preference number: 4 (lower is better)
Translates to: KQSCKVRVELRMRLYKCHTSCDR*QPQDAQ
Trigger: CTGAGCATCTTGGGGTTGGCAGCGGTCGCAACTTGT...ATGACACTTGTACAGCCGCATTCTGAGCTCAACCCTGACCTTGCAGCTCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR GCA 90 bp TTCTGTGATCACAAGTTGCGACCGCTGCCAACCCCAAGATGCTCAGAGACTCATTCTGTGATCACAAGTTaGGACCGCTGCCAACCCCAA +
Preference number: 4 (lower is better)
Translates to: FCDHKLRPLPTPRCSETHSVITS*DRCQPQ
Trigger: TTGGGGTTGGCAGCGGTCGCAACTTGTGATCACAGA...ATGAGTCTCTGAGCATCTTGGGGTTGGCAGCGGTCGCAACTTGTGATCACAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CCA 90 bp TCATCTCGATCCAAGTGCCCATCCTTGTCAATGTCACTGAGGTCCCAGACCCTGACAACGAATTTCCAGTaGGAATCTGCTGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SSRSKCPSLSMSLRSQTLTTNFQ*ESAGRG
Trigger: CCCTCTCCCAGCAGATTCCCACTGGAAATTCGTTGT...CAGGGTCTGGGACCTCAGTGACATTGACAAGGATGGGCACTTGGATCGAGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592031.5
ENST00000593760.5
ENST00000596037.5
CDS-3UTR CCA 90 bp CCGTGCTCATGCCTAGTAATACTTGACAGTGGAGGAATGTGGAAGGAGCCGTGGACAACGAATTTCCAGTaGGAATCTGCTGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PCSCLVILDSGGMWKEPWTTNFQ*ESAGRG
Trigger: CCCTCTCCCAGCAGATTCCCACTGGAAATTCGTTGT...CCACGGCTCCTTCCACATTCCTCCACTGTCAAGTATTACTAGGCATGAGCACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602151.1
CDS-3UTR CCA 90 bp GAGGCCTTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATGGGTCTTTTCCACTATGTGCTAGAAGGTTCTaGGTGAGGCCCGAGTGCATG +
Preference number: 4 (lower is better)
Translates to: EALEGLAAEEGTNGSFPLCARRF*VRPECM
Trigger: CATGCACTCGGGCCTCACCCAGAACCTTCTAGCACA...TAGTGGAAAAGACCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAAGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR CCA 90 bp GGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGGAGGGTTCAGCTCCGACTTaGCTCGGTTCAGATCGTCTT +
Preference number: 4 (lower is better)
Translates to: GGYGNHLITSPREKRVWEGSAPT*LGSDRL
Trigger: AAGACGATCTGAACCGAGCCAAGTCGGAGCTGAACC...CTCCCATACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp AAGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCAAGTTTGCTCCTTGCCTaGTTGATTTCGTCTTGCGTT +
Preference number: 4 (lower is better)
Translates to: KGFPRRCDLSRSCSRVCSSLLLA*LISSCV
Trigger: AACGCAAGACGAAATCAACCAGGCAAGGAGCAAACT...TGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp CGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCAGGGGCAGACTCTGGTAGTTTGCTCCTTGCCTaGTTGATTTCGTCTTGCGTT +
Preference number: 4 (lower is better)
Translates to: RNGKLHVPRFEAAGADSGSLLLA*LISSCV
Trigger: AACGCAAGACGAAATCAACCAGGCAAGGAGCAAACT...ACCAGAGTCTGCCCCTGCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp GTTAAGTTTGAGAAGCCCTCTGAACTTGGGTGGTTGGCCCAATGTAAATACTTCTGCTCCAGGCTCCTGTaGGCCTCCTGGCGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: VKFEKPSELGWLAQCKYFCSRLL*ASWRLS
Trigger: TGAAAGCCGCCAGGAGGCCCACAGGAGCCTGGAGCA...GAAGTATTTACATTGGGCCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp GTTAAGTTTGAGAAGCCCTCTGAACTTGGGTGGTTGGCCCAATGTAAATACTTCCCAGGTCGGTCAGGCTaGCACCATGGGCTCCATCGA +
Preference number: 4 (lower is better)
Translates to: VKFEKPSELGWLAQCKYFPGRSG*HHGLHR
Trigger: TCGATGGAGCCCATGGTGCCAGCCTGACCGACCTGG...GAAGTATTTACATTGGGCCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp CTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGCGCCTTCGCTCAGGTTaGCCAGGTCGGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LFFLQKWQCRINNARDRERLRSG*PGRSGW
Trigger: CCAGCCTGACCGACCTGGCCAACCTGAGCGAAGGCG...CTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp CCGTGGAGGAGCAGGTTTCTTCGGAGGCAGAGCAGGAGTGTCCTGTTTACTTTTAAGGGGTCTTCTGTCTaGAAAGGATCCGGATGCAAC +
Preference number: 4 (lower is better)
Translates to: PWRSRFLRRQSRSVLFTFKGSSV*KGSGCN
Trigger: GTTGCATCCGGATCCTTTCCAGACAGAAGACCCCTT...AAAAGTAAACAGGACACTCCTGCTCTGCCTCCGAAGAAACCTGCTCCTCCACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CCA 90 bp CTTCTCCAGGGCTCGGTACACCAAGTGCATGGCCACAGCGAACTCATCTCGATCTCTGCGGAACCAAGCTaGCTTACAGGTGTACTTTTA +
Preference number: 4 (lower is better)
Translates to: LLQGSVHQVHGHSELISISAEPS*LTGVLL
Trigger: TAAAAGTACACCTGTAAGCCAGCTTGGTTCCGCAGA...GATCGAGATGAGTTCGCTGTGGCCATGCACTTGGTGTACCGAGCCCTGGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CCA 90 bp GGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCTTGGACTTTGTTCCAGGCTGCAAGGCCTaGTGTGAACGCGCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: GGHSKQVLKGSRPILDFVPGCKA*CERAKW
Trigger: CCACTTTGCGCGTTCACACCAGGCCTTGCAGCCTGG...AACAAAGTCCAAGATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp GCCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTTCTTGGACTTTGTTCTaGAAGCCAGGATTCAGCATG +
Preference number: 4 (lower is better)
Translates to: ARGRLWKPPHYESTRKESSWTLF*KPGFSM
Trigger: CATGCTGAATCCTGGCTTCCAGAACAAAGTCCAAGA...ACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp GGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCTTGGACTTTGTTCACGGAGAGAGCTGCTaGAGGCAGCAGAGCACCAAG +
Preference number: 4 (lower is better)
Translates to: GGHSKQVLKGSRPILDFVHGESC*RQQSTK
Trigger: CTTGGTGCTCTGCTGCCTCCAGCAGCTCTCTCCGTG...AACAAAGTCCAAGATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp GCGAACTCATCTCGATCCAAGTGCCCATCCTTGTCAATGTCACTGAGGTCCCAGCAGAGAGCAAACCATTaGTGGGCAAGAGGCTTTCAA +
Preference number: 4 (lower is better)
Translates to: ANSSRSKCPSLSMSLRSQQRANH*WARGFQ
Trigger: TTGAAAGCCTCTTGCCCATCAATGGTTTGCTCTCTG...CTGGGACCTCAGTGACATTGACAAGGATGGGCACTTGGATCGAGATGAGTTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592031.5
ENST00000593760.5
ENST00000596037.5
CDS-3UTR TCA 90 bp TTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCTGGGGCGCTGCTTGCCAGAGAGCAAACCATTaGTGGGCAAGAGGCTTTCAA +
Preference number: 4 (lower is better)
Translates to: FRRGQFLLERATPWGAACQRANH*WARGFQ
Trigger: TTGAAAGCCTCTTGCCCATCAATGGTTTGCTCTCTG...GCAAGCAGCGCCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp ACACCAAGTGCATGGCCACAGCGAACTCATCTCGATCCAAGTGCCCATCCTTGTATCAAGAGGCAGCTTTaGGTTCATGAGGACTGGCTT +
Preference number: 4 (lower is better)
Translates to: TPSAWPQRTHLDPSAHPCIKRQL*VHEDWL
Trigger: AAGCCAGTCCTCATGAACTCAAAGCTGCCTCTTGAT...ACAAGGATGGGCACTTGGATCGAGATGAGTTCGCTGTGGCCATGCACTTGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000593760.5
CDS-3UTR TCA 90 bp CTGTCTTTGGAGTTGGGGGAATCACTGGCCACTTGCAAACTGCCACTTCACTGCATCAAGAGGCAGCTTTaGGTTCATGAGGACTGGCTT +
Preference number: 4 (lower is better)
Translates to: LSLELGESLATCKLPLHCIKRQL*VHEDWL
Trigger: AAGCCAGTCCTCATGAACTCAAAGCTGCCTCTTGAT...GCAGTGAAGTGGCAGTTTGCAAGTGGCCAGTGATTCCCCCAACTCCAAAGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp GGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCTGGGGCGCTGCTTGCCATTAACTGGGCAATCTCTTaGCTGATGTCATCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: GEANSYLKEQHPGALLAINWAIS*LMSSSS
Trigger: GGAGCTTGATGACATCAGTCAAGAGATTGCCCAGTT...AATGGCAAGCAGCGCCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp CTGGAACCAACGTTGGCCATGAACAGATCTGGCGGGTGGGATGTTCTGCTGTCAGATTTCGTCTTGCGTTaGCTTCAGGGACTTGATGAT +
Preference number: 4 (lower is better)
Translates to: LEPTLAMNRSGGWDVLLSDFVLR*LQGLDD
Trigger: ATCATCAAGTCCCTGAAGTCAACGCAAGACGAAATC...TGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCCAACGTTGGTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp GGAGCCTGTGCACTGGGCCCTAAATCTTCTGCCAGTCCCAAACCGTGTCACAGCACAAGGCTTTATTTTTaGAAGGATCATCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: GACALGPKSSASPKPCHSTRLYF*KDHPWL
Trigger: GAGCCATGGATGATCCTTTCAAAAATAAAGCCTTGT...GCTGTGACACGGTTTGGGACTGGCAGAAGATTTAGGGCCCAGTGCACAGGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR TCA 90 bp TGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATAGACATCTGCACTGCCCCATGGGTCACTTTCTTTaGAAGGGTCCCCTCCAAATG +
Preference number: 4 (lower is better)
Translates to: WSTVATVCVCIYRHLHCPMGHFL*KGPLQM
Trigger: CATTTGGAGGGGACCCTTTCAAAGAAAGTGACCCAT...GGGGCAGTGCAGATGTCTATATATACACACACACACCGTCGCCACCGTACTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp ACACCAAGTGCATGGCCACAGCGAACTCATCTCGATCCAAGTGCCCATCCTTGTATGGGTCACTTTCTTTaGAAGGGTCCCCTCCAAATG +
Preference number: 4 (lower is better)
Translates to: TPSAWPQRTHLDPSAHPCMGHFL*KGPLQM
Trigger: CATTTGGAGGGGACCCTTTCAAAGAAAGTGACCCAT...ACAAGGATGGGCACTTGGATCGAGATGAGTTCGCTGTGGCCATGCACTTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR TCA 90 bp CATTTTATACAACGAGTGCATACACCACTGGGGGAGTGTCTGACTGATGCGTGGCATTGCCAAAAGAGGTaGAGTCTGCAAAGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: HFIQRVHTPLGECLTDAWHCQKR*SLQSPR
Trigger: CCTCGGGCTTTGCAGACTTCACCTCTTTTGGCAATG...CCACGCATCAGTCAGACACTCCCCCAGTGGTGTATGCACTCGTTGTATAAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp AAACTGATCCAATTTTGGTTAAGTTTGAGAAGCCCTCTGAACTTGGGTGGTTGGCCCCTGCCCCAGGCCTaGTCACAACTCCAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: KLIQFWLSLRSPLNLGGWPLPQA*SQLQGH
Trigger: ATGACCCTGGAGTTGTGATCAGGCCTGGGGCAGGGG...CCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAACCAAAATTGGATCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp GAACTCATCTCGATCCAAGTGCCCATCCTTGTCAATGTCACTGAGGTCCCAGACCTGCTGGTGTCGTGCTaGGAAGAGAGAGAAACATTC +
Preference number: 4 (lower is better)
Translates to: ELISIQVPILVNVTEVPDLLVSC*EERETF
Trigger: GAATGTTTCTCTCTCTTCTCAGCACGACACCAGCAG...GTCTGGGACCTCAGTGACATTGACAAGGATGGGCACTTGGATCGAGATGAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596037.5
CDS-3UTR GCA 90 bp TCTCCAGAGAGCAAACCATTGATGGGCAAGAGGCTTTCAAAAATCCCATCAAATAGCCCAGTGGGCCTCTaGAGAGGGCGGTGTGACCAT +
Preference number: 4 (lower is better)
Translates to: SPESKPLMGKRLSKIPSNSPVGL*RGRCDH
Trigger: ATGGTCACACCGCCCTCTGCAGAGGCCCACTGGGCT...ATTTGATGGGATTTTTGAAAGCCTCTTGCCCATCAATGGTTTGCTCTCTGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000596037.5
CDS-3UTR GCA 90 bp CGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCCCGAGGCAGAGGCCTTATCATCTCGATCCAAGTaGCCATCCTTGTCAATGTCA +
Preference number: 4 (lower is better)
Translates to: RRTQLTEVKSAKPEAEALSSRSK*PSLSMS
Trigger: TGACATTGACAAGGATGGGCACTTGGATCGAGATGA...TAAGGCCTCTGCCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp CAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTACCAGCTCGGTACACCAAGTaGATGGCCACAGCGAACTCA +
Preference number: 4 (lower is better)
Translates to: QKWQCRINNARDRECEVPARYTK*MATANS
Trigger: TGAGTTCGCTGTGGCCATGCACTTGGTGTACCGAGC...TGGTACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp GTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATAGACATCTGCACTACTGTTGGCTGTGTTTaGTTGAGGCTGTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: VLGVRWRRCVCVYIDICTTVGCV*LRLCLG
Trigger: CCCCAAGCACAGCCTCAAGCAAACACAGCCAACAGT...AGTGCAGATGTCTATATATACACACACACACCGTCGCCACCGTACTCCAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp GAGGCCTTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATGGGTCTTTTCCACTAACTGTTGGCTGTGTTTaGTTGAGGCTGTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: EALEGLAAEEGTNGSFPLTVGCV*LRLCLG
Trigger: CCCCAAGCACAGCCTCAAGCAAACACAGCCAACAGT...TAGTGGAAAAGACCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAAGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR GCA 90 bp CAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTACCATGGGTGAGGCCCGAGTaGATGAAGATCTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: QKWQCRINNARDRECEVPWVRPE*MKISFT
Trigger: GGTGAAGGAGATCTTCATGCACTCGGGCCTCACCCA...TGGTACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp GGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGACGCGAATTGGTCTTTaGTTAACTTCCCCGTTTGCC +
Preference number: 4 (lower is better)
Translates to: GGGYGNHLITSPREKRVWTRIGL*LTSPFA
Trigger: GGCAAACGGGGAAGTTAAGCAAAGACCAATTCGCGT...CCATACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GGGGGAATCACTGGCCACTTGCAAACTGCCACTTCACTGCCAACTTTTATCCAACGAGCTCCTGCAAACTaGTTGTTTCCCGGTCTAGGT +
Preference number: 4 (lower is better)
Translates to: GGITGHLQTATSLPTFIQRAPAN*LFPGLG
Trigger: ACCTAGACCGGGAAACAAGCAGTTTGCAGGAGCTCG...TTGGATAAAAGTTGGCAGTGAAGTGGCAGTTTGCAAGTGGCCAGTGATTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GTTAAGTTTGAGAAGCCCTCTGAACTTGGGTGGTTGGCCCAATGTAAATACTTCCGGAGCTTGGCCTTCTaGTGGTCCATCTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VKFEKPSELGWLAQCKYFRSLAF*WSISSR
Trigger: CCTGGACGAGATGGACCAGCAGAAGGCCAAGCTCCG...GAAGTATTTACATTGGGCCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCTTGGACTTTGTTCTCGCCCAGCCTGAATaGTCTGCTCCAGCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: GGHSKQVLKGSRPILDFVLAQPE*SAPAGF
Trigger: AAACCCAGCTGGAGCAGAGCATTCAGGCTGGGCGAG...AACAAAGTCCAAGATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GTGAAGTCTGCAAAGCCCGAGGCAGAGGCCTTAGAAGGTTTAGCTGCAGAGGAGTGGTTGATTTCGTCTTaGGTTGACTTCAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: VKSAKPEAEALEGLAAEEWLISS*VDFRDL
Trigger: CAAGTCCCTGAAGTCAACGCAAGACGAAATCAACCA...CTCCTCTGCAGCTAAACCTTCTAAGGCCTCTGCCTCGGGCTTTGCAGACTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR GCA 90 bp CCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTAGGAAAGTTTGCTCCTTaGCTGGTTGATTTCGTCTTG +
Preference number: 4 (lower is better)
Translates to: PGGGYGNHLITSPREKRVGKFAP*LVDFVL
Trigger: CAAGACGAAATCAACCAGGCAAGGAGCAAACTTTCC...TACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GGGGGAATCACTGGCCACTTGCAAACTGCCACTTCACTGCCAACTTTTATCCAATCCTGGCGGCTTTCATaGAGCTGGGAAAGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: GGITGHLQTATSLPTFIQSWRLS*SWESLL
Trigger: GAGCAAACTTTCCCAGCTGCATGAAAGCCGCCAGGA...TTGGATAAAAGTTGGCAGTGAAGTGGCAGTTTGCAAGTGGCCAGTGATTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp TTCCGCAGAGATGGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCTCCTGGCGGCTTTCATaGAGCTGGGAAAGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: FRRDGGHSKQVLKGSRPISWRLS*SWESLL
Trigger: GAGCAAACTTTCCCAGCTGCATGAAAGCCGCCAGGA...GATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCCATCTCTGCGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCTTGGACTTTGTTCCATGGCTCCAAAACTaGCCCTCTCTGCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: GGHSKQVLKGSRPILDFVPWLQN*PSLPGR
Trigger: TCTCCCTGGCAGAGAGGGGCAGTTTTGGAGCCATGG...AACAAAGTCCAAGATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp TGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATAGACATCTGCACTGCCCCTGGAAAGGATCCGGATaGAACTCTTGCGTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: WSTVATVCVCIYRHLHCPWKGSG*NSCVLL
Trigger: CAACAACACGCAAGAGTTGCATCCGGATCCTTTCCA...GGGGCAGTGCAGATGTCTATATATACACACACACACCGTCGCCACCGTACTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp GCAAAGCCCGAGGCAGAGGCCTTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATGTATATATAGACATCTaGACTGCCCCCTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: AKPEAEALEGLAAEEGTNVYIDI*TAPSLE
Trigger: TTCCAGAGAGGGGGCAGTGCAGATGTCTATATATAC...ATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAAGGCCTCTGCCTCGGGCTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602022.5
CDS-3UTR GCA 90 bp ATACTTCCGCAGAGATGGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCAACACCCTGGGGCGCTaGTTGCCATTACTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: ILPQRWRAFKTGSERIQANTLGR*LPLLPH
Trigger: ATGAGGAAGTAATGGCAAGCAGCGCCCCAGGGTGTT...GGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCCATCTCTGCGGAAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp AGCAACACATTTGCTTTTCAAGGTGTTCCTTGTGGAAACACACATACACATAGAGAAAGAGGGAGGCGGTaGACCCAGCGGGGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: SNTFAFQGVPCGNTHTHRERGRR*TQRGPD
Trigger: GTCTGGCCCCCGCTGGGTGCACCGCCTCCCTCTTTC...TCTATGTGTATGTGTGTTTCCACAAGGAACACCTTGAAAAGCAAATGTGTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GCCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTCTTTCGGATGCCAGTTaGAAGTTTCCATGTAACGTA +
Preference number: 4 (lower is better)
Translates to: ARGRLWKPPHYESTRKESLSDAS*KFPCNV
Trigger: TACGTTACATGGAAACTTGCAACTGGCATCCGAAAG...ACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGGAGGTGGGGCAGTGTCTTTaGAGGGAGACAAAGATCAGT +
Preference number: 4 (lower is better)
Translates to: GGYGNHLITSPREKRVWEVGQCL*RETKIS
Trigger: ACTGATCTTTGTCTCCCTGCAAAGACACTGCCCCAC...CTCCCATACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602009.5
CDS-3UTR CCA 90 bp GGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGGAGCACCCAGTTCACTGTTaGCTGTGTTTGCTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: GGYGNHLITSPREKRVWEHPVHC*LCLLEA
Trigger: AGCCTCAAGCAAACACAGCCAACAGTGAACTGGGTG...CTCCCATACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp CTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGCTCCTGTGGGCCTCCTaGCGGCTTTCATGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LFFLQKWQCRINNARDRELLWAS*RLSCSW
Trigger: CCAGCTGCATGAAAGCCGCCAGGAGGCCCACAGGAG...CTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp TCAACTTACAGAGGTGAAGTCTGCAAAGCCCGAGGCAGAGGCCTTAGAAGGTTTGCAAAGGGGTCATTCTaGAACGGGTCGCCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: STYRGEVCKARGRGLRRFAKGSF*NGSPLK
Trigger: CTTCAAAGGCGACCCGTTCCAGAATGACCCCTTTGC...AAACCTTCTAAGGCCTCTGCCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp TTTATACAACGAGTGCATACACCACTGGGGGAGTGTCTGACTGATGCGTGGGAGAACCCCTTTTTACTTTaGAACGGGTCGCCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: FIQRVHTPLGECLTDAWENPFLL*NGSPLS
Trigger: TGACAGCGGCGACCCGTTCCAAAGTAAAAAGGGGTT...CTCCCACGCATCAGTCAGACACTCCCCCAGTGGTGTATGCACTCGTTGTATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp GGGGGAATCACTGGCCACTTGCAAACTGCCACTTCACTGCCAACTTTTATCCAAAACAGATCTGGCGGGTaGGATGTTCTGCTGTCACAC +
Preference number: 4 (lower is better)
Translates to: GGITGHLQTATSLPTFIQNRSGG*DVLLSH
Trigger: GTGTGACAGCAGAACATCCCACCCGCCAGATCTGTT...TTGGATAAAAGTTGGCAGTGAAGTGGCAGTTTGCAAGTGGCCAGTGATTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp CCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGTGAACGCGCAAAGTaGCAGCAAAAACAACAGACA +
Preference number: 4 (lower is better)
Translates to: PGGGYGNHLITSPREKRVCERAK*QQKQQT
Trigger: TGTCTGTTGTTTTTGCTGCCACTTTGCGCGTTCACA...TACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp CCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTAATACTTCCGCAGAGATaGAGGGCATTCAAAACAGGT +
Preference number: 4 (lower is better)
Translates to: PGGGYGNHLITSPREKRVILPQR*RAFKTG
Trigger: ACCTGTTTTGAATGCCCTCCATCTCTGCGGAAGTAT...TACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp GTTAAGTTTGAGAAGCCCTCTGAACTTGGGTGGTTGGCCCAATGTAAATACTTCGCCCGGGGGCGGCTATaGAAACCACCTCATTACGAG +
Preference number: 4 (lower is better)
Translates to: VKFEKPSELGWLAQCKYFARGRL*KPPHYE
Trigger: CTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGGC...GAAGTATTTACATTGGGCCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp CTGGAACCAACGTTGGCCATGAACAGATCTGGCGGGTGGGATGTTCTGCTGTCACAAAGCGAGGAGTTCTaGCTTCTCGTAACTCATGAA +
Preference number: 4 (lower is better)
Translates to: LEPTLAMNRSGGWDVLLSQSEEF*LLVTHE
Trigger: TTCATGAGTTACGAGAAGCCAGAACTCCTCGCTTTG...TGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCCAACGTTGGTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp CCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTACAAAGCGAGGAGTTCTaGCTTCTCGTAACTCATGAA +
Preference number: 4 (lower is better)
Translates to: PGGGYGNHLITSPREKRVQSEEF*LLVTHE
Trigger: TTCATGAGTTACGAGAAGCCAGAACTCCTCGCTTTG...TACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp GCCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTGTAAAAATCTGTCTTTaGAGTTGGGGGAATCACTGG +
Preference number: 4 (lower is better)
Translates to: ARGRLWKPPHYESTRKESVKICL*SWGNHW
Trigger: CCAGTGATTCCCCCAACTCCAAAGACAGATTTTTAC...ACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR CAA 72 bp GACATCTGGCTGAAGTCGGCAAAGCCTTCAGCACTATaGAAGGACCCACTTCCGAAGGGATCTAAGGTTCCA +
Preference number: 4 (lower is better)
Translates to: DIWLKSAKPSAL*KDPLPKGSKVP
Trigger: TGGAACCTTAGATCCCTTCGGAAGTGGGTCCTTCAATAGTGCTGAAGGCTTTGCCGACTTCAGCCAGATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR CAA 72 bp AAGTGCTTCTCGGAATCTGTGTTCTGTGATCACAAGTaGCGACCGCTGCCAACCCCAAGATGCTCAGAGACT +
Preference number: 4 (lower is better)
Translates to: KCFSESVFCDHK*RPLPTPRCSET
Trigger: AGTCTCTGAGCATCTTGGGGTTGGCAGCGGTCGCAACTTGTGATCACAGAACACAGATTCCGAGAAGCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR TCA 90 bp GGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGGAGCAGAGAGCAAACCATTaGTGGGCAAGAGGCTTTCAA +
Preference number: 4 (lower is better)
Translates to: GGYGNHLITSPREKRVWEQRANH*WARGFQ
Trigger: TTGAAAGCCTCTTGCCCATCAATGGTTTGCTCTCTG...CTCCCATACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp TTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTACCTTGTCAATGTCACTaGGGTCCCAGACCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LQKWQCRINNARDRECEVPCQCH*GPRPCP
Trigger: TGGGCAGGGTCTGGGACCTCAGTGACATTGACAAGG...TACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp GTGTGGTGTTTAGAGAGCACGAGCGCTCACTCTTATTCCAGGGAGGAAGAGGAAGGGCAATCTCTTGACTaGTGTCATCAAGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: VWCLESTSAHSYSREEEEGQSLD*CHQAPS
Trigger: TGAAGGAGCTTGATGACATCAGTCAAGAGATTGCCC...TTCCTCTTCCTCCCTGGAATAAGAGTGAGCGCTCGTGCTCTCTAAACACCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp CTGTCTTTGGAGTTGGGGGAATCACTGGCCACTTGCAAACTGCCACTTCACTGCGATTTCGTCTTGCGTTaGCTTCAGGGACTTGATGAT +
Preference number: 4 (lower is better)
Translates to: LSLELGESLATCKLPLHCDFVLR*LQGLDD
Trigger: ATCATCAAGTCCCTGAAGTCAACGCAAGACGAAATC...GCAGTGAAGTGGCAGTTTGCAAGTGGCCAGTGATTCCCCCAACTCCAAAGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp CTGGAACCAACGTTGGCCATGAACAGATCTGGCGGGTGGGATGTTCTGCTGTCAATTCAAAACAGGTTCTaGAAGGATCCAGGCCTATCT +
Preference number: 4 (lower is better)
Translates to: LEPTLAMNRSGGWDVLLSIQNRF*KDPGLS
Trigger: AGATAGGCCTGGATCCTTTCAGAACCTGTTTTGAAT...TGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCCAACGTTGGTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp GGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGGTGGGGTTTCCACAATaGGCAGAAACTGATCCAATT +
Preference number: 4 (lower is better)
Translates to: GGGYGNHLITSPREKRVWVGFPQ*AETDPI
Trigger: AATTGGATCAGTTTCTGCTCATTGTGGAAACCCCAC...CCATACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp AGGTCACACCTGTCTTGGTATCAGGGGCTCAAGAGCTCTCAAAAATGTAAGGGGAGGCCAATTCTTACTTaGAAGAGCAACACCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RSHLSWYQGLKSSQKCKGRPILT*KSNTLG
Trigger: CCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCT...CCCCTTACATTTTTGAGAGCTCTTGAGCCCCTGATACCAAGACAGGTGTGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp AGGTCACACCTGTCTTGGTATCAGGGGCTCAAGAGCTCTCAAAAATGTAAGGGGACAACTCCAGGGTCATaGGGTCAGAGTAAAGTGCAG +
Preference number: 4 (lower is better)
Translates to: RSHLSWYQGLKSSQKCKGTTPGS*GQSKVQ
Trigger: CTGCACTTTACTCTGACCTCATGACCCTGGAGTTGT...CCCCTTACATTTTTGAGAGCTCTTGAGCCCCTGATACCAAGACAGGTGTGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp GGGGGAATCACTGGCCACTTGCAAACTGCCACTTCACTGCCAACTTTTATCCAAACAACTCCAGGGTCATaGGGTCAGAGTAAAGTGCAG +
Preference number: 4 (lower is better)
Translates to: GGITGHLQTATSLPTFIQTTPGS*GQSKVQ
Trigger: CTGCACTTTACTCTGACCTCATGACCCTGGAGTTGT...TTGGATAAAAGTTGGCAGTGAAGTGGCAGTTTGCAAGTGGCCAGTGATTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp GGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCTTGGACTTTGTTGAGGAAGCTGTTCCCTaGACGAAGACTGAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: GGHSKQVLKGSRPILDFVEEAVP*TKTEQD
Trigger: GTCCTGCTCAGTCTTCGTTCAGGGAACAGCTTCCTC...AACAAAGTCCAAGATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GAGAAACTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGCCCAGTGGGCCTCTaGAGAGGGCGGTGTGACCAT +
Preference number: 4 (lower is better)
Translates to: EKLFFLQKWQCRINNARDSPVGL*RGRCDH
Trigger: ATGGTCACACCGCCCTCTGCAGAGGCCCACTGGGCT...GTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAGTTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp ACACCAAGTGCATGGCCACAGCGAACTCATCTCGATCCAAGTGCCCATCCTTGTTCATCTCGATCCAAGTaGCCATCCTTGTCAATGTCA +
Preference number: 4 (lower is better)
Translates to: TPSAWPQRTHLDPSAHPCSSRSK*PSLSMS
Trigger: TGACATTGACAAGGATGGGCACTTGGATCGAGATGA...ACAAGGATGGGCACTTGGATCGAGATGAGTTCGCTGTGGCCATGCACTTGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000593760.5
CDS-3UTR GCA 90 bp CTGTCTTTGGAGTTGGGGGAATCACTGGCCACTTGCAAACTGCCACTTCACTGCTCATCTCGATCCAAGTaGCCATCCTTGTCAATGTCA +
Preference number: 4 (lower is better)
Translates to: LSLELGESLATCKLPLHCSSRSK*PSLSMS
Trigger: TGACATTGACAAGGATGGGCACTTGGATCGAGATGA...GCAGTGAAGTGGCAGTTTGCAAGTGGCCAGTGATTCCCCCAACTCCAAAGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GTTAAGTTTGAGAAGCCCTCTGAACTTGGGTGGTTGGCCCAATGTAAATACTTCCTTAACTTCCCCGTTTaGCTCGTATCGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VKFEKPSELGWLAQCKYFLNFPV*LVSARA
Trigger: GGCCCTGGCCGATACGAGGCAAACGGGGAAGTTAAG...GAAGTATTTACATTGGGCCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp CTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATAGACATCTGCACTGCCACGCGAATTGGTCTTTaGTTAACTTCCCCGTTTGCC +
Preference number: 4 (lower is better)
Translates to: LGVRWRRCVCVYIDICTATRIGL*LTSPFA
Trigger: GGCAAACGGGGAAGTTAAGCAAAGACCAATTCGCGT...GGCAGTGCAGATGTCTATATATACACACACACACCGTCGCCACCGTACTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp GTGTGGTGTTTAGAGAGCACGAGCGCTCACTCTTATTCCAGGGAGGAAGAGGAAACGCGAATTGGTCTTTaGTTAACTTCCCCGTTTGCC +
Preference number: 4 (lower is better)
Translates to: VWCLESTSAHSYSREEEETRIGL*LTSPFA
Trigger: GGCAAACGGGGAAGTTAAGCAAAGACCAATTCGCGT...TTCCTCTTCCTCCCTGGAATAAGAGTGAGCGCTCGTGCTCTCTAAACACCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp CTGTCTTTGGAGTTGGGGGAATCACTGGCCACTTGCAAACTGCCACTTCACTGCGGAAAGTTTGCTCCTTaGCTGGTTGATTTCGTCTTG +
Preference number: 4 (lower is better)
Translates to: LSLELGESLATCKLPLHCGKFAP*LVDFVL
Trigger: CAAGACGAAATCAACCAGGCAAGGAGCAAACTTTCC...GCAGTGAAGTGGCAGTTTGCAAGTGGCCAGTGATTCCCCCAACTCCAAAGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GTGCATGGCCACAGCGAACTCATCTCGATCCAAGTGCCCATCCTTGTCAATGTCAGTTGTCTGCTGTTCTaGAAAGGGGTCATTCTGGAA +
Preference number: 4 (lower is better)
Translates to: VHGHSELISIQVPILVNVSCLLF*KGVILE
Trigger: TTCCAGAATGACCCCTTTGCAGAACAGCAGACAACT...GACATTGACAAGGATGGGCACTTGGATCGAGATGAGTTCGCTGTGGCCATGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR GCA 90 bp TTGAGCATCCTGTTTCTGAGCCTCGAGCTCCTGCAAACTGCTTGTTTCCCGGTCTCTGTTGAAGTTGTCTaGTGTTCTGCAAAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: LSILFLSLELLQTACFPVSVEVV*CSAKGS
Trigger: TGACCCCTTTGCAGAACAGCAGACAACTTCAACAGA...GACCGGGAAACAAGCAGTTTGCAGGAGCTCGAGGCTCAGAAACAGGATGCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CCA 90 bp AGGAGCAGGTTTCTTCGGAGGCAGAGCAGGAGTGTCCTGTTTACTTTTAAAGGGCACCCAGTTCACTGTTaGCTGTGTTTGCTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: RSRFLRRQSRSVLFTFKGHPVHC*LCLLEA
Trigger: AGCCTCAAGCAAACACAGCCAACAGTGAACTGGGTG...CCCTTTAAAAGTAAACAGGACACTCCTGCTCTGCCTCCGAAGAAACCTGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CCA 90 bp GAGGCCTTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATGGGTCTTTTCCACTACACCCAGTTCACTGTTaGCTGTGTTTGCTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: EALEGLAAEEGTNGSFPLHPVHC*LCLLEA
Trigger: AGCCTCAAGCAAACACAGCCAACAGTGAACTGGGTG...TAGTGGAAAAGACCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAAGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR CCA 90 bp CTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGAGCTTGGCCTTCTGCTaGTCCATCTCGTCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: LFFLQKWQCRINNARDRESLAFC*SISSRR
Trigger: CCGCCTGGACGAGATGGACCAGCAGAAGGCCAAGCT...CTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp CAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTACCAGGTTCAGCTCCGACTTaGCTCGGTTCAGATCGTCTT +
Preference number: 4 (lower is better)
Translates to: QKWQCRINNARDRECEVPGSAPT*LGSDRL
Trigger: AAGACGATCTGAACCGAGCCAAGTCGGAGCTGAACC...TGGTACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp GGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCTGGGGCGCTGCTTGCCATTAGTTTGCTCCTTGCCTaGTTGATTTCGTCTTGCGTT +
Preference number: 4 (lower is better)
Translates to: GEANSYLKEQHPGALLAISLLLA*LISSCV
Trigger: AACGCAAGACGAAATCAACCAGGCAAGGAGCAAACT...AATGGCAAGCAGCGCCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp AGTCCCAAACCGTGTCACAGCGTGGCATATGAGGGATGGAGGCCTTCTCCGTGTTGGATCCGAGGTAAATaGGTCATTCTTTGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: SPKPCHSVAYEGWRPSPCWIRGK*VILCLF
Trigger: AAACAGACAAAGAATGACCCATTTACCTCGGATCCA...ACACGGAGAAGGCCTCCATCCCTCATATGCCACGCTGTGACACGGTTTGGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CCA 90 bp TTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCTGGGGCGCTGCTTGCATTCAACCTTTACCATaGCTCCAAAACTGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: FRRGQFLLERATPWGAACIQPLP*LQNCPS
Trigger: AGAGGGGCAGTTTTGGAGCCATGGTAAAGGTTGAAT...GCAAGCAGCGCCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp GGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCTTGGACTTTGTTGGCCATGAACAGATCTaGCGGGTGGGATGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GGHSKQVLKGSRPILDFVGHEQI*RVGCSA
Trigger: AGCAGAACATCCCACCCGCCAGATCTGTTCATGGCC...AACAAAGTCCAAGATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp GGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGTTGGGACTGAGGACTTaGCTGCTGAGAAAAGAAACA +
Preference number: 4 (lower is better)
Translates to: GGGYGNHLITSPREKRVWLGLRT*LLRKET
Trigger: TGTTTCTTTTCTCAGCAGCCAAGTCCTCAGTCCCAA...CCATACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp CGGAACAGCACCAAGACGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCGTAAAAATCTGTCTTTaGAGTTGGGGGAATCACTGG +
Preference number: 4 (lower is better)
Translates to: RNSTKTKWETTCPQVRGCVKICL*SWGNHW
Trigger: CCAGTGATTCCCCCAACTCCAAAGACAGATTTTTAC...GCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCGTCTTGGTGCTGTTCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp CGGAACAGCACCAAGACGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCATCTTAGAACAGTCTTaGCCCCTTGGTTTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: RNSTKTKWETTCPQVRGCILEQS*PLGFQS
Trigger: ACTTTGGAAACCAAGGGGCCAAGACTGTTCTAAGAT...GCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCGTCTTGGTGCTGTTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602009.5
CDS-3UTR CCA 90 bp AGTCCCAAACCGTGTCACAGCGTGGCATATGAGGGATGGAGGCCTTCTCCGTGTCAGCTGATGGAACGCTaGAATCAAAACAAGATAGTA +
Preference number: 4 (lower is better)
Translates to: SPKPCHSVAYEGWRPSPCQLMER*NQNKIV
Trigger: TACTATCTTGTTTTGATTCCAGCGTTCCATCAGCTG...ACACGGAGAAGGCCTCCATCCCTCATATGCCACGCTGTGACACGGTTTGGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
3UTR CAA 72 bp CCTTTGAAGGGGTCAGCTCCTTTAAATGGGTCAGATTaGAAGGGGTCTTCTGTCTGGAAAGGATCCGGATGC +
Preference number: 4 (lower is better)
Translates to: PLKGSAPLNGSD*KGSSVWKGSGC
Trigger: GCATCCGGATCCTTTCCAGACAGAAGACCCCTTCAAATCTGACCCATTTAAAGGAGCTGACCCCTTCAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR CAA 72 bp TCGTCAGTGGCAGAGCCACGGAATGGGTCACTTTCTTaGAAAGGGTCCCCTCCAAATGGATCTGTTGAAGTT +
Preference number: 4 (lower is better)
Translates to: SSVAEPRNGSLS*KGSPPNGSVEV
Trigger: AACTTCAACAGATCCATTTGGAGGGGACCCTTTCAAAGAAAGTGACCCATTCCGTGGCTCTGCCACTGACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR TCA 90 bp ATACTTCCGCAGAGATGGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCATCAAGAGGCAGCTTTaGGTTCATGAGGACTGGCTT +
Preference number: 4 (lower is better)
Translates to: ILPQRWRAFKTGSERIQAIKRQL*VHEDWL
Trigger: AAGCCAGTCCTCATGAACTCAAAGCTGCCTCTTGAT...GGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCCATCTCTGCGGAAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp TTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTATTGGCTGTGTTTGCTTaGGGCTGTGCTTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: LQKWQCRINNARDRECEVLAVFA*GCAWGT
Trigger: TGTCCCCCAAGCACAGCCTCAAGCAAACACAGCCAA...TACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp GAGGCCTTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATGGGTCTTTTCCACTAGGGCAATCTCTTGACTaGTGTCATCAAGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: EALEGLAAEEGTNGSFPLGQSLD*CHQAPS
Trigger: TGAAGGAGCTTGATGACATCAGTCAAGAGATTGCCC...TAGTGGAAAAGACCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAAGGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR TCA 90 bp TCAACTTACAGAGGTGAAGTCTGCAAAGCCCGAGGCAGAGGCCTTAGAAGGTTTAACTGGGCAATCTCTTaGCTGATGTCATCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: STYRGEVCKARGRGLRRFNWAIS*LMSSSS
Trigger: GGAGCTTGATGACATCAGTCAAGAGATTGCCCAGTT...AAACCTTCTAAGGCCTCTGCCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp GAGGCCTTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATGGGTCTTTTCCACTAAGTGATGAGATCATCTaGGTCTCATCCTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: EALEGLAAEEGTNGSFPLSDEII*VSSWHF
Trigger: GAAGTGCCAGGATGAGACTCAGATGATCTCATCACT...TAGTGGAAAAGACCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAAGGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR TCA 90 bp TTCCGCAGAGATGGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCAGTGATGAGATCATCTaGGTCTCATCCTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: FRRDGGHSKQVLKGSRPISDEII*VSSWHF
Trigger: GAAGTGCCAGGATGAGACTCAGATGATCTCATCACT...GATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCCATCTCTGCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp TTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTACACCCTCCCTGTGTATaGCGGATCGACCTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: LQKWQCRINNARDRECEVHPPCV*RIDLLV
Trigger: TACAAGCAGGTCGATCCGGCATACACAGGGAGGGTG...TACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp GAACTCATCTCGATCCAAGTGCCCATCCTTGTCAATGTCACTGAGGTCCCAGACTCATCTCGATCCAAGTaGCCATCCTTGTCAATGTCA +
Preference number: 4 (lower is better)
Translates to: ELISIQVPILVNVTEVPDSSRSK*PSLSMS
Trigger: TGACATTGACAAGGATGGGCACTTGGATCGAGATGA...GTCTGGGACCTCAGTGACATTGACAAGGATGGGCACTTGGATCGAGATGAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000592031.5
ENST00000593760.5
ENST00000596037.5
CDS-3UTR GCA 90 bp GGTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATAGACATCTGCACAGTTGTCTGCTGTTCTaGAAAGGGGTCATTCTGGAA +
Preference number: 4 (lower is better)
Translates to: GPWSTVATVCVCIYRHLHSCLLF*KGVILE
Trigger: TTCCAGAATGACCCCTTTGCAGAACAGCAGACAACT...GTGCAGATGTCTATATATACACACACACACCGTCGCCACCGTACTCCAAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp AAACATAACCAAAATTTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCCAGCATGGCCACCTGTaGCAGGCTGCAAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: KHNQNFRRGQFLLERATPQHGHL*QAARPG
Trigger: ACCAGGCCTTGCAGCCTGGCACAGGTGGCCATGCTG...GGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAAATTTTGGTTATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCTTGGACTTTGTTACAAGCCAAAAGCGGTaGCAGGGGACAATGCCAGAT +
Preference number: 4 (lower is better)
Translates to: GGHSKQVLKGSRPILDFVTSQKR*QGTMPD
Trigger: ATCTGGCATTGTCCCCTGGCACCGCTTTTGGCTTGT...AACAAAGTCCAAGATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GCCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTAAACTGCCACTTCACTaGCAACTTTTATCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: ARGRLWKPPHYESTRKESKLPLH*QLLSKK
Trigger: TTTCTTGGATAAAAGTTGGCAGTGAAGTGGCAGTTT...ACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp AAACAGAGCTGCAAGGTCAGGGTTGAGCTCAGAATGCGGCTGTACAAGTGTCATGGGACACACCTCATCTaGTTTCCTTCATTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: KQSCKVRVELRMRLYKCHGTHLI*FPSFLG
Trigger: TCCAAGGAATGAAGGAAAGCAGATGAGGTGTGTCCC...ATGACACTTGTACAGCCGCATTCTGAGCTCAACCCTGACCTTGCAGCTCTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CCA 90 bp GCTCCTGCAAACTGCTTGTTTCCCGGTCTAGGTCATTTTGTAATTCCTGCACCTACAACGAATTTCCAGTaGGAATCTGCTGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: APANCLFPGLGHFVIPAPTTNFQ*ESAGRG
Trigger: CCCTCTCCCAGCAGATTCCCACTGGAAATTCGTTGT...AGGTGCAGGAATTACAAAATGACCTAGACCGGGAAACAAGCAGTTTGCAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CCA 90 bp TCAACTTACAGAGGTGAAGTCTGCAAAGCCCGAGGCAGAGGCCTTAGAAGGTTTGAACCCTTTACCTTCTaGATCGGCCAAGTCCCATAT +
Preference number: 4 (lower is better)
Translates to: STYRGEVCKARGRGLRRFEPFTF*IGQVPY
Trigger: ATATGGGACTTGGCCGATCCAGAAGGTAAAGGGTTC...AAACCTTCTAAGGCCTCTGCCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535753.6
CDS-3UTR CCA 90 bp GGGGGAATCACTGGCCACTTGCAAACTGCCACTTCACTGCCAACTTTTATCCAAGAACCCTTTACCTTCTaGATCGGCCAAGTCCCATAT +
Preference number: 4 (lower is better)
Translates to: GGITGHLQTATSLPTFIQEPFTF*IGQVPY
Trigger: ATATGGGACTTGGCCGATCCAGAAGGTAAAGGGTTC...TTGGATAAAAGTTGGCAGTGAAGTGGCAGTTTGCAAGTGGCCAGTGATTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597937.5
CDS-3UTR CCA 90 bp CTGGAACCAACGTTGGCCATGAACAGATCTGGCGGGTGGGATGTTCTGCTGTCAGTGAAATTTAGGCGGTaGCATGCTCAAATTCAGATT +
Preference number: 4 (lower is better)
Translates to: LEPTLAMNRSGGWDVLLSVKFRR*HAQIQI
Trigger: AATCTGAATTTGAGCATGCCACCGCCTAAATTTCAC...TGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCCAACGTTGGTTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597937.5
CDS-3UTR CCA 90 bp TTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTCTTTCTCTTGGAGGGTaGGATGAGGGACGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: FFLQKWQCRINNARDRECLSLGG*DEGRGQ
Trigger: CTGCCCCCGTCCCTCATCCCACCCTCCAAGAGAAAG...ACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp TTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATGGGTCTTTTCCACTAAACGGGCACCCAGTTCACTGTTaGCTGTGTTTGCTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LEGLAAEEGTNGSFPLNGHPVHC*LCLLEA
Trigger: AGCCTCAAGCAAACACAGCCAACAGTGAACTGGGTG...CCCGTTTAGTGGAAAAGACCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR CCA 90 bp TTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTATGTGCTAGAAGGTTCTaGGTGAGGCCCGAGTGCATG +
Preference number: 4 (lower is better)
Translates to: LQKWQCRINNARDRECEVCARRF*VRPECM
Trigger: CATGCACTCGGGCCTCACCCAGAACCTTCTAGCACA...TACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp GGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCTGGGGCGCTGCTTGCCATTATAGCTAACGCGAATTaGTCTTTGCTTAACTTCCCC +
Preference number: 4 (lower is better)
Translates to: GEANSYLKEQHPGALLAIIANAN*SLLNFP
Trigger: GGGGAAGTTAAGCAAAGACCAATTCGCGTTAGCTAT...AATGGCAAGCAGCGCCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp GTTAAGTTTGAGAAGCCCTCTGAACTTGGGTGGTTGGCCCAATGTAAATACTTCGCATGTCTCGGAGCTTaGCCTTCTGCTGGTCCATCT +
Preference number: 4 (lower is better)
Translates to: VKFEKPSELGWLAQCKYFACLGA*PSAGPS
Trigger: AGATGGACCAGCAGAAGGCCAAGCTCCGAGACATGC...GAAGTATTTACATTGGGCCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp TTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCTGGGGCGCTGCTTGCTTCAGATCGTCTTCCTaGGACTTTAAGTCAGATTCC +
Preference number: 4 (lower is better)
Translates to: FRRGQFLLERATPWGAACFRSSS*DFKSDS
Trigger: GGAATCTGACTTAAAGTCCCAGGAAGACGATCTGAA...GCAAGCAGCGCCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp GGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCTTGGACTTTGTTGGTTCAGCTCCGACTTaGCTCGGTTCAGATCGTCTT +
Preference number: 4 (lower is better)
Translates to: GGHSKQVLKGSRPILDFVGSAPT*LGSDRL
Trigger: AAGACGATCTGAACCGAGCCAAGTCGGAGCTGAACC...AACAAAGTCCAAGATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp TTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATGGGTCTTTTCCACTAAACGGGGGCAGAGCCACGGAATaGGTCACTTTCTTTGAAAGG +
Preference number: 4 (lower is better)
Translates to: LEGLAAEEGTNGSFPLNGGRATE*VTFFER
Trigger: CCTTTCAAAGAAAGTGACCCATTCCGTGGCTCTGCC...CCCGTTTAGTGGAAAAGACCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR CCA 90 bp TTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGGGCGGTTTAGGCCGTaGAGGAGCAGGTTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: FFLQKWQCRINNARDRECGRFRP*RSRFLR
Trigger: CCGAAGAAACCTGCTCCTCCACGGCCTAAACCGCCC...ACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248070.10
ENST00000592031.5
CDS-3UTR CCA 90 bp TTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATGGGTCTTTTCCACTAAACGGGAACCCCTTTTTACTTTaGAACGGGTCGCCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: LEGLAAEEGTNGSFPLNGNPFLL*NGSPLS
Trigger: TGACAGCGGCGACCCGTTCCAAAGTAAAAAGGGGTT...CCCGTTTAGTGGAAAAGACCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR CCA 90 bp AGGTCACACCTGTCTTGGTATCAGGGGCTCAAGAGCTCTCAAAAATGTAAGGGGCCCTCTGAACTTGGGTaGTTGGCCCAATGTAAATAC +
Preference number: 4 (lower is better)
Translates to: RSHLSWYQGLKSSQKCKGPSELG*LAQCKY
Trigger: GTATTTACATTGGGCCAACCACCCAAGTTCAGAGGG...CCCCTTACATTTTTGAGAGCTCTTGAGCCCCTGATACCAAGACAGGTGTGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp TTCCGCAGAGATGGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCATCTGTCTTTGGAGTTaGGGGAATCACTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: FRRDGGHSKQVLKGSRPIICLWS*GNHWPL
Trigger: AAGTGGCCAGTGATTCCCCCAACTCCAAAGACAGAT...GATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCCATCTCTGCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp CTGGAACCAACGTTGGCCATGAACAGATCTGGCGGGTGGGATGTTCTGCTGTCATTTCTTCCACCTAGTTaGAAAGAAATAGCCCGAGTA +
Preference number: 4 (lower is better)
Translates to: LEPTLAMNRSGGWDVLLSFLPPS*KEIARV
Trigger: TACTCGGGCTATTTCTTTCCAACTAGGTGGAAGAAA...TGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCCAACGTTGGTTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602009.5
3UTR CAA 72 bp CATCCTGTTTCTGAGCCTCGAGCTCCTGCAAACTGCTaGTTTCCCGGTCTAGGTCATTTTGTAATTCCTGCA +
Preference number: 4 (lower is better)
Translates to: HPVSEPRAPANC*FPGLGHFVIPA
Trigger: TGCAGGAATTACAAAATGACCTAGACCGGGAAACAAGCAGTTTGCAGGAGCTCGAGGCTCAGAAACAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
3UTR CAA 72 bp TTGGTTAAGTTTGAGAAGCCCTCTGAACTTGGGTGGTaGGCCCAATGTAAATACTTCCGCAGAGATGGAGGG +
Preference number: 4 (lower is better)
Translates to: LVKFEKPSELGW*AQCKYFRRDGG
Trigger: CCCTCCATCTCTGCGGAAGTATTTACATTGGGCCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp CAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTACCAGGGCAATCTCTTGACTaGTGTCATCAAGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: QKWQCRINNARDRECEVPGQSLD*CHQAPS
Trigger: TGAAGGAGCTTGATGACATCAGTCAAGAGATTGCCC...TGGTACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp GCTCCTGCAAACTGCTTGTTTCCCGGTCTAGGTCATTTTGTAATTCCTGCACCTGGGCAATCTCTTGACTaGTGTCATCAAGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: APANCLFPGLGHFVIPAPGQSLD*CHQAPS
Trigger: TGAAGGAGCTTGATGACATCAGTCAAGAGATTGCCC...AGGTGCAGGAATTACAAAATGACCTAGACCGGGAAACAAGCAGTTTGCAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR TCA 90 bp CAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTACCAAGTGATGAGATCATCTaGGTCTCATCCTGGCACTTC +
Preference number: 4 (lower is better)
Translates to: QKWQCRINNARDRECEVPSDEII*VSSWHF
Trigger: GAAGTGCCAGGATGAGACTCAGATGATCTCATCACT...TGGTACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp CTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGGCTTGGACATCTGGCTaGAGTCGGCAAAGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: LFFLQKWQCRINNARDREAWTSG*SRQSLQ
Trigger: CTGAAGGCTTTGCCGACTTCAGCCAGATGTCCAAGC...CTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248070.10
ENST00000592031.5
CDS-3UTR TCA 90 bp ATACTTCCGCAGAGATGGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCGTGGGGTTTCCACAATaGGCAGAAACTGATCCAATT +
Preference number: 4 (lower is better)
Translates to: ILPQRWRAFKTGSERIQAVGFPQ*AETDPI
Trigger: AATTGGATCAGTTTCTGCTCATTGTGGAAACCCCAC...GGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCCATCTCTGCGGAAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp TCTCCAGAGAGCAAACCATTGATGGGCAAGAGGCTTTCAAAAATCCCATCAAATCACCCTCCCTGTGTATaGCGGATCGACCTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: SPESKPLMGKRLSKIPSNHPPCV*RIDLLV
Trigger: TACAAGCAGGTCGATCCGGCATACACAGGGAGGGTG...ATTTGATGGGATTTTTGAAAGCCTCTTGCCCATCAATGGTTTGCTCTCTGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000596037.5
CDS-3UTR GCA 90 bp TTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGTTTGCTTGAGGCTGTaGTTGGGGGACAGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: FFLQKWQCRINNARDRECVCLRL*LGDRLP
Trigger: AGGGAGCCTGTCCCCCAAGCACAGCCTCAAGCAAAC...ACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp TTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTTCATCCTGGCACTTCTaGCGGACGTCGCTCAGCATG +
Preference number: 4 (lower is better)
Translates to: FFLQKWQCRINNARDRECSSWHF*RTSLSM
Trigger: CATGCTGAGCGACGTCCGGCAGAAGTGCCAGGATGA...ACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp AGGTCACACCTGTCTTGGTATCAGGGGCTCAAGAGCTCTCAAAAATGTAAGGGGTGGTTGATTTCGTCTTaGGTTGACTTCAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: RSHLSWYQGLKSSQKCKGWLISS*VDFRDL
Trigger: CAAGTCCCTGAAGTCAACGCAAGACGAAATCAACCA...CCCCTTACATTTTTGAGAGCTCTTGAGCCCCTGATACCAAGACAGGTGTGACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GGGGGAATCACTGGCCACTTGCAAACTGCCACTTCACTGCCAACTTTTATCCAATGGTTGATTTCGTCTTaGGTTGACTTCAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: GGITGHLQTATSLPTFIQWLISS*VDFRDL
Trigger: CAAGTCCCTGAAGTCAACGCAAGACGAAATCAACCA...TTGGATAAAAGTTGGCAGTGAAGTGGCAGTTTGCAAGTGGCCAGTGATTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GTAGCCATCCAGGTCCAGGTCGGTCTTCAGGAATATCTCATCAAATCGCATCTTTGGAAAGGATCCGGATaGAACTCTTGCGTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: VAIQVQVGLQEYLIKSHLWKGSG*NSCVLL
Trigger: CAACAACACGCAAGAGTTGCATCCGGATCCTTTCCA...AAGATGCGATTTGATGAGATATTCCTGAAGACCGACCTGGACCTGGATGGCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR GCA 90 bp AAACAGAGCTGCAAGGTCAGGGTTGAGCTCAGAATGCGGCTGTACAAGTGTCATAGTTGTCTGCTGTTCTaGAAAGGGGTCATTCTGGAA +
Preference number: 4 (lower is better)
Translates to: KQSCKVRVELRMRLYKCHSCLLF*KGVILE
Trigger: TTCCAGAATGACCCCTTTGCAGAACAGCAGACAACT...ATGACACTTGTACAGCCGCATTCTGAGCTCAACCCTGACCTTGCAGCTCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR GCA 90 bp TTCTCGGAATCTGTGTTCTGTGATCACAAGTTGCGACCGCTGCCAACCCCAAGAGAACAGAATCTCAAGTaGTTCTCGGAATCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: FSESVFCDHKLRPLPTPREQNLK*FSESVF
Trigger: GAACACAGATTCCGAGAAGCACTTGAGATTCTGTTC...TCTTGGGGTTGGCAGCGGTCGCAACTTGTGATCACAGAACACAGATTCCGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CCA 90 bp GGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCTTGGACTTTGTTACAACGAATTTCCAGTaGGAATCTGCTGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GGHSKQVLKGSRPILDFVTTNFQ*ESAGRG
Trigger: CCCTCTCCCAGCAGATTCCCACTGGAAATTCGTTGT...AACAAAGTCCAAGATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597937.5
CDS-3UTR CCA 90 bp TTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTACTCAAGGTAACTTCATaGCCACTCTGTGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: LQKWQCRINNARDRECEVLKVTS*PLCAQA
Trigger: GGCCTGTGCACAGAGTGGCCATGAAGTTACCTTGAG...TACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp TTTGTCTCCAGAGAGCAAACCATTGATGGGCAAGAGGCTTTCAAAAATCCCATCCTCAAGGTAACTTCATaGCCACTCTGTGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: FVSREQTIDGQEAFKNPILKVTS*PLCAQA
Trigger: GGCCTGTGCACAGAGTGGCCATGAAGTTACCTTGAG...GATGGGATTTTTGAAAGCCTCTTGCCCATCAATGGTTTGCTCTCTGGAGACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000596037.5
CDS-3UTR CCA 90 bp AAACATAACCAAAATTTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCCTTTCTCTTGGAGGGTaGGATGAGGGACGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: KHNQNFRRGQFLLERATPLSLGG*DEGRGQ
Trigger: CTGCCCCCGTCCCTCATCCCACCCTCCAAGAGAAAG...GGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAAATTTTGGTTATGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp AAACTTCATTTTATACAACGAGTGCATACACCACTGGGGGAGTGTCTGACTGATGCATGTCTCGGAGCTTaGCCTTCTGCTGGTCCATCT +
Preference number: 4 (lower is better)
Translates to: KLHFIQRVHTPLGECLTDACLGA*PSAGPS
Trigger: AGATGGACCAGCAGAAGGCCAAGCTCCGAGACATGC...ATCAGTCAGACACTCCCCCAGTGGTGTATGCACTCGTTGTATAAAATGAAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp GAGAAACTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACGCTCCATCGAGCACCTaGTCATACTGCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: EKLFFLQKWQCRINNARDAPSST*SYCSRL
Trigger: GAGCCTGGAGCAGTATGACCAGGTGCTCGATGGAGC...GTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAGTTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp GTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATAGACATCTGCACTGTCAGCTCCTTTAAATaGGTCAGATTTGAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: VLGVRWRRCVCVYIDICTVSSFK*VRFEGV
Trigger: GACCCCTTCAAATCTGACCCATTTAAAGGAGCTGAC...AGTGCAGATGTCTATATATACACACACACACCGTCGCCACCGTACTCCAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp GAGAAACTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACGGGGGCTTGGACATCTaGCTGAAGTCGGCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: EKLFFLQKWQCRINNARDGGLDI*LKSAKP
Trigger: AGGCTTTGCCGACTTCAGCCAGATGTCCAAGCCCCC...GTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAGTTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000248070.10
ENST00000592031.5
CDS-3UTR CCA 90 bp CATTTTATACAACGAGTGCATACACCACTGGGGGAGTGTCTGACTGATGCGTGGTCTGCGGAACCAAGCTaGCTTACAGGTGTACTTTTA +
Preference number: 4 (lower is better)
Translates to: HFIQRVHTPLGECLTDAWSAEPS*LTGVLL
Trigger: TAAAAGTACACCTGTAAGCCAGCTTGGTTCCGCAGA...CCACGCATCAGTCAGACACTCCCCCAGTGGTGTATGCACTCGTTGTATAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp ATACTTCCGCAGAGATGGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTCTTGGACTTTGTTCTaGAAGCCAGGATTCAGCATG +
Preference number: 4 (lower is better)
Translates to: ILPQRWRAFKTGSERIQASWTLF*KPGFSM
Trigger: CATGCTGAATCCTGGCTTCCAGAACAAAGTCCAAGA...GGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCCATCTCTGCGGAAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp ATACTTCCGCAGAGATGGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCCTGAACTTGGGTGGTTaGCCCAATGTAAATACTTCC +
Preference number: 4 (lower is better)
Translates to: ILPQRWRAFKTGSERIQALNLGG*PNVNTS
Trigger: GGAAGTATTTACATTGGGCCAACCACCCAAGTTCAG...GGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCCATCTCTGCGGAAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp TTCCGCAGAGATGGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCCTGAACTTGGGTGGTTaGCCCAATGTAAATACTTCC +
Preference number: 4 (lower is better)
Translates to: FRRDGGHSKQVLKGSRPILNLGG*PNVNTS
Trigger: GGAAGTATTTACATTGGGCCAACCACCCAAGTTCAG...GATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCCATCTCTGCGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp ATACTTCCGCAGAGATGGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTTGGGACTGAGGACTTaGCTGCTGAGAAAAGAAACA +
Preference number: 4 (lower is better)
Translates to: ILPQRWRAFKTGSERIQALGLRT*LLRKET
Trigger: TGTTTCTTTTCTCAGCAGCCAAGTCCTCAGTCCCAA...GGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCCATCTCTGCGGAAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp AAACATAACCAAAATTTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCTCCGGCGAGAGGACTTaGGGAGGGTCGATGCCTTTA +
Preference number: 4 (lower is better)
Translates to: KHNQNFRRGQFLLERATPSGERT*GGSMPL
Trigger: TAAAGGCATCGACCCTCCTCAAGTCCTCTCGCCGGA...GGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAAATTTTGGTTATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp GGTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATAGACATCTGCACACAAGGCTTTATTTTTaGAAGGATCATCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: GPWSTVATVCVCIYRHLHTRLYF*KDHPWL
Trigger: GAGCCATGGATGATCCTTTCAAAAATAAAGCCTTGT...GTGCAGATGTCTATATATACACACACACACCGTCGCCACCGTACTCCAAGGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp CAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTACCATCATCTCGATCCAAGTaGCCATCCTTGTCAATGTCA +
Preference number: 4 (lower is better)
Translates to: QKWQCRINNARDRECEVPSSRSK*PSLSMS
Trigger: TGACATTGACAAGGATGGGCACTTGGATCGAGATGA...TGGTACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp CAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTACCAGGAAAGTTTGCTCCTTaGCTGGTTGATTTCGTCTTG +
Preference number: 4 (lower is better)
Translates to: QKWQCRINNARDRECEVPGKFAP*LVDFVL
Trigger: CAAGACGAAATCAACCAGGCAAGGAGCAAACTTTCC...TGGTACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp AAACATAACCAAAATTTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCAAAACTGCCCCTCTCTaGCAGGGAGACGCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: KHNQNFRRGQFLLERATPKTAPL*QGDAFA
Trigger: AGCGAAGGCGTCTCCCTGGCAGAGAGGGGCAGTTTT...GGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAAATTTTGGTTATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp AAACTGATCCAATTTTGGTTAAGTTTGAGAAGCCCTCTGAACTTGGGTGGTTGGAACACCCTGGGGCGCTaGTTGCCATTACTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: KLIQFWLSLRSPLNLGGWNTLGR*LPLLPH
Trigger: ATGAGGAAGTAATGGCAAGCAGCGCCCCAGGGTGTT...CCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAACCAAAATTGGATCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp CTGTCTTTGGAGTTGGGGGAATCACTGGCCACTTGCAAACTGCCACTTCACTGCAAACTGCCACTTCACTaGCAACTTTTATCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: LSLELGESLATCKLPLHCKLPLH*QLLSKK
Trigger: TTTCTTGGATAAAAGTTGGCAGTGAAGTGGCAGTTT...GCAGTGAAGTGGCAGTTTGCAAGTGGCCAGTGATTCCCCCAACTCCAAAGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCTTGGACTTTGTTTGGCCACTTGCAAACTaGCACTTCACTGCCAACTTT +
Preference number: 4 (lower is better)
Translates to: GGHSKQVLKGSRPILDFVWPLAN*HFTANF
Trigger: AAAGTTGGCAGTGAAGTGGCAGTTTGCAAGTGGCCA...AACAAAGTCCAAGATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp TTTGTCTCCAGAGAGCAAACCATTGATGGGCAAGAGGCTTTCAAAAATCCCATCACAACGAATTTCCAGTaGGAATCTGCTGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: FVSREQTIDGQEAFKNPITTNFQ*ESAGRG
Trigger: CCCTCTCCCAGCAGATTCCCACTGGAAATTCGTTGT...GATGGGATTTTTGAAAGCCTCTTGCCCATCAATGGTTTGCTCTCTGGAGACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000596037.5
CDS-3UTR CCA 90 bp CATTTTATACAACGAGTGCATACACCACTGGGGGAGTGTCTGACTGATGCGTGGATAGCTAACGCGAATTaGTCTTTGCTTAACTTCCCC +
Preference number: 4 (lower is better)
Translates to: HFIQRVHTPLGECLTDAWIANAN*SLLNFP
Trigger: GGGGAAGTTAAGCAAAGACCAATTCGCGTTAGCTAT...CCACGCATCAGTCAGACACTCCCCCAGTGGTGTATGCACTCGTTGTATAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp GAGGCCTTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATGGGTCTTTTCCACTAATAGCTAACGCGAATTaGTCTTTGCTTAACTTCCCC +
Preference number: 4 (lower is better)
Translates to: EALEGLAAEEGTNGSFPLIANAN*SLLNFP
Trigger: GGGGAAGTTAAGCAAAGACCAATTCGCGTTAGCTAT...TAGTGGAAAAGACCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAAGGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR CCA 90 bp AGCAACACATTTGCTTTTCAAGGTGTTCCTTGTGGAAACACACATACACATAGAGCTCCATCGAGCACCTaGTCATACTGCTCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SNTFAFQGVPCGNTHTHRAPSST*SYCSRL
Trigger: GAGCCTGGAGCAGTATGACCAGGTGCTCGATGGAGC...TCTATGTGTATGTGTGTTTCCACAAGGAACACCTTGAAAAGCAAATGTGTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp GGTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATAGACATCTGCACTGGATCCGAGGTAAATaGGTCATTCTTTGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GPWSTVATVCVCIYRHLHWIRGK*VILCLF
Trigger: AAACAGACAAAGAATGACCCATTTACCTCGGATCCA...GTGCAGATGTCTATATATACACACACACACCGTCGCCACCGTACTCCAAGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CCA 90 bp GGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCTTGGACTTTGTTATCTGTCTTTGGAGTTaGGGGAATCACTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: GGHSKQVLKGSRPILDFVICLWS*GNHWPL
Trigger: AAGTGGCCAGTGATTCCCCCAACTCCAAAGACAGAT...AACAAAGTCCAAGATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp AAACATAACCAAAATTTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCGGCAGGAGTCTCCCATaGTGGGGCAGTGTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: KHNQNFRRGQFLLERATPGRSLP*WGSVFA
Trigger: TGCAAAGACACTGCCCCACCATGGGAGACTCCTGCC...GGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAAATTTTGGTTATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602009.5
CDS-3UTR CCA 90 bp AGGTCCCAGACCCTGCCCAGGACATCAAGAGGCAGCTTTGAGTTCATGAGGACTGAATTAAATCATAGGTaGGTGGGTTTGAAATTTAGG +
Preference number: 4 (lower is better)
Translates to: RSQTLPRTSRGSFEFMRTELNHR*VGLKFR
Trigger: CCTAAATTTCAAACCCACCCACCTATGATTTAATTC...AGTCCTCATGAACTCAAAGCTGCCTCTTGATGTCCTGGGCAGGGTCTGGGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596037.5
CDS-3UTR CCA 90 bp CTTTATTTCAAAATGAAAACTTCCCGTGTTAAGTTTGACAGCCGTGCTCATGCCGACAGTGGAGGAATGTaGAAGGAGCCGTGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LYFKMKTSRVKFDSRAHADSGGM*KEPWRS
Trigger: TGACCTCCACGGCTCCTTCCACATTCCTCCACTGTC...GGCATGAGCACGGCTGTCAAACTTAACACGGGAAGTTTTCATTTTGAAATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602151.1
CDS-3UTR CCA 90 bp CCGTGCTCATGCCTAGTAATACTTGACAGTGGAGGAATGTGGAAGGAGCCGTGGACTAGCCATGAAAGATaGCTCCAAGTGTTTAAAAGA +
Preference number: 4 (lower is better)
Translates to: PCSCLVILDSGGMWKEPWTSHER*LQVFKR
Trigger: TCTTTTAAACACTTGGAGCCATCTTTCATGGCTAGT...CCACGGCTCCTTCCACATTCCTCCACTGTCAAGTATTACTAGGCATGAGCACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602151.1
CDS-3UTR TCA 90 bp TTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTACAGAGAGCAAACCATTaGTGGGCAAGAGGCTTTCAA +
Preference number: 4 (lower is better)
Translates to: LQKWQCRINNARDRECEVQRANH*WARGFQ
Trigger: TTGAAAGCCTCTTGCCCATCAATGGTTTGCTCTCTG...TACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp TTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTAATCAAGAGGCAGCTTTaGGTTCATGAGGACTGGCTT +
Preference number: 4 (lower is better)
Translates to: LQKWQCRINNARDRECEVIKRQL*VHEDWL
Trigger: AAGCCAGTCCTCATGAACTCAAAGCTGCCTCTTGAT...TACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp TTTGTCTCCAGAGAGCAAACCATTGATGGGCAAGAGGCTTTCAAAAATCCCATCATCAAGAGGCAGCTTTaGGTTCATGAGGACTGGCTT +
Preference number: 4 (lower is better)
Translates to: FVSREQTIDGQEAFKNPIIKRQL*VHEDWL
Trigger: AAGCCAGTCCTCATGAACTCAAAGCTGCCTCTTGAT...GATGGGATTTTTGAAAGCCTCTTGCCCATCAATGGTTTGCTCTCTGGAGACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000596037.5
CDS-3UTR TCA 90 bp TTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTAATGGGTCACTTTCTTTaGAAGGGTCCCCTCCAAATG +
Preference number: 4 (lower is better)
Translates to: LQKWQCRINNARDRECEVMGHFL*KGPLQM
Trigger: CATTTGGAGGGGACCCTTTCAAAGAAAGTGACCCAT...TACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp GAGAAACTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGCCTTCAGCACTATTaGAGGACCCACTTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: EKLFFLQKWQCRINNARDSLQHY*RTHFRR
Trigger: CCTTCGGAAGTGGGTCCTTCAATAGTGCTGAAGGCT...GTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAGTTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp CTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTTTAAAGGGGTCATCTaGGAATCCTGCCCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: LFFLQKWQCRINNARDREFKGVI*ESCPSQ
Trigger: TTGGGAGGGGCAGGATTCTCAGATGACCCCTTTAAA...CTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000248070.10
ENST00000592031.5
CDS-3UTR GCA 90 bp AAACATAACCAAAATTTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCCACCCTCCCTGTGTATaGCGGATCGACCTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: KHNQNFRRGQFLLERATPHPPCV*RIDLLV
Trigger: TACAAGCAGGTCGATCCGGCATACACAGGGAGGGTG...GGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAAATTTTGGTTATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597937.5
CDS-3UTR GCA 90 bp GACCTTTATTTCAAAATGAAAACTTCCCGTGTTAAGTTTGACAGCCGTGCTCATCACCCTCCCTGTGTATaGCGGATCGACCTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: DLYFKMKTSRVKFDSRAHHPPCV*RIDLLV
Trigger: TACAAGCAGGTCGATCCGGCATACACAGGGAGGGTG...ATGAGCACGGCTGTCAAACTTAACACGGGAAGTTTTCATTTTGAAATAAAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602151.1
CDS-3UTR GCA 90 bp AGCAACACATTTGCTTTTCAAGGTGTTCCTTGTGGAAACACACATACACATAGATTCATGGCCACTCTGTaGACAGGCCACCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: SNTFAFQGVPCGNTHTHRFMATL*TGHQSQ
Trigger: CTGAGACTGGTGGCCTGTGCACAGAGTGGCCATGAA...TCTATGTGTATGTGTGTTTCCACAAGGAACACCTTGAAAAGCAAATGTGTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597937.5
CDS-3UTR GCA 90 bp GAGAAACTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAAATCGCATCTTGTCTaGCACGGGCACCACCCAGTT +
Preference number: 4 (lower is better)
Translates to: EKLFFLQKWQCRINNARDKSHLV*HGHHPV
Trigger: AACTGGGTGGTGCCCGTGGCAGACAAGATGCGATTT...GTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAGTTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp TTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTATGGAAAGGATCCGGATaGAACTCTTGCGTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: LQKWQCRINNARDRECEVWKGSG*NSCVLL
Trigger: CAACAACACGCAAGAGTTGCATCCGGATCCTTTCCA...TACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp AAACATAACCAAAATTTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCGGTGCCAGGGGACAATaGCAGATGGGGAAAGTAGGA +
Preference number: 4 (lower is better)
Translates to: KHNQNFRRGQFLLERATPGARGQ*QMGKVG
Trigger: TCCTACTTTCCCCATCTGGCATTGTCCCCTGGCACC...GGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAAATTTTGGTTATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GAACGCTGGAATCAAAACAAGATAGTATTGGAGACCCATTTTCCACAGCTCTGTGTGGCCAACGTTTTCTaGTTTCGGGAGATGGTTTCC +
Preference number: 4 (lower is better)
Translates to: ERWNQNKIVLETHFPQLCVANVF*FREMVS
Trigger: GGAAACCATCTCCCGAAAGCAGAAAACGTTGGCCAC...ACAGAGCTGTGGAAAATGGGTCTCCAATACTATCTTGTTTTGATTCCAGCGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CCA 90 bp TTTGTCTCCAGAGAGCAAACCATTGATGGGCAAGAGGCTTTCAAAAATCCCATCGAACCCTTTACCTTCTaGATCGGCCAAGTCCCATAT +
Preference number: 4 (lower is better)
Translates to: FVSREQTIDGQEAFKNPIEPFTF*IGQVPY
Trigger: ATATGGGACTTGGCCGATCCAGAAGGTAAAGGGTTC...GATGGGATTTTTGAAAGCCTCTTGCCCATCAATGGTTTGCTCTCTGGAGACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596037.5
CDS-3UTR CCA 90 bp GAGGCCTTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATGGGTCTTTTCCACTAGTGAAATTTAGGCGGTaGCATGCTCAAATTCAGATT +
Preference number: 4 (lower is better)
Translates to: EALEGLAAEEGTNGSFPLVKFRR*HAQIQI
Trigger: AATCTGAATTTGAGCATGCCACCGCCTAAATTTCAC...TAGTGGAAAAGACCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAAGGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR CCA 90 bp GAGAAACTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACCGGCTTTCATGCAGCTaGGAAAGTTTGCTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: EKLFFLQKWQCRINNARDRLSCS*ESLLLA
Trigger: GGCAAGGAGCAAACTTTCCCAGCTGCATGAAAGCCG...GTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAGTTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp GAGGCCTTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATGGGTCTTTTCCACTATGGATCCGAGGTAAATaGGTCATTCTTTGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: EALEGLAAEEGTNGSFPLWIRGK*VILCLF
Trigger: AAACAGACAAAGAATGACCCATTTACCTCGGATCCA...TAGTGGAAAAGACCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAAGGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
3UTR CAA 72 bp AACATAACCAAAATTTCAGGAGAGGCCAATTCTTACTaGAAAGAGCAACACCCTGGGGCGCTGCTTGCCATT +
Preference number: 4 (lower is better)
Translates to: NITKISGEANSY*KEQHPGALLAI
Trigger: AATGGCAAGCAGCGCCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAAATTTTGGTTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp AGGTCACACCTGTCTTGGTATCAGGGGCTCAAGAGCTCTCAAAAATGTAAGGGGTTACTGACCTTCTGCTaGATGAAATACATAGCTAAC +
Preference number: 4 (lower is better)
Translates to: RSHLSWYQGLKSSQKCKGLLTFC*MKYIAN
Trigger: GTTAGCTATGTATTTCATTCAGCAGAAGGTCAGTAA...CCCCTTACATTTTTGAGAGCTCTTGAGCCCCTGATACCAAGACAGGTGTGACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp AAACTTCATTTTATACAACGAGTGCATACACCACTGGGGGAGTGTCTGACTGATAACTGGGCAATCTCTTaGCTGATGTCATCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: KLHFIQRVHTPLGECLTDNWAIS*LMSSSS
Trigger: GGAGCTTGATGACATCAGTCAAGAGATTGCCCAGTT...ATCAGTCAGACACTCCCCCAGTGGTGTATGCACTCGTTGTATAAAATGAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR TCA 90 bp CAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTACCAACAAGGCTTTATTTTTaGAAGGATCATCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: QKWQCRINNARDRECEVPTRLYF*KDHPWL
Trigger: GAGCCATGGATGATCCTTTCAAAAATAAAGCCTTGT...TGGTACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp GGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCTTGGACTTTGTTATTCAAAACAGGTTCTaGAAGGATCCAGGCCTATCT +
Preference number: 4 (lower is better)
Translates to: GGHSKQVLKGSRPILDFVIQNRF*KDPGLS
Trigger: AGATAGGCCTGGATCCTTTCAGAACCTGTTTTGAAT...AACAAAGTCCAAGATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp CTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGGGCCACCAGTCTCAGTaGAACATAGAAACCCTGTTT +
Preference number: 4 (lower is better)
Translates to: LFFLQKWQCRINNARDREGHQSQ*NIETLF
Trigger: AAACAGGGTTTCTATGTTGCACTGAGACTGGTGGCC...CTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248070.10
ENST00000535753.6
CDS-3UTR GCA 90 bp TCTCCAGAGAGCAAACCATTGATGGGCAAGAGGCTTTCAAAAATCCCATCAAATGGCCACCAGTCTCAGTaGAACATAGAAACCCTGTTT +
Preference number: 4 (lower is better)
Translates to: SPESKPLMGKRLSKIPSNGHQSQ*NIETLF
Trigger: AAACAGGGTTTCTATGTTGCACTGAGACTGGTGGCC...ATTTGATGGGATTTTTGAAAGCCTCTTGCCCATCAATGGTTTGCTCTCTGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596037.5
CDS-3UTR GCA 90 bp AAACTTCATTTTATACAACGAGTGCATACACCACTGGGGGAGTGTCTGACTGATTGGAAAGGATCCGGATaGAACTCTTGCGTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: KLHFIQRVHTPLGECLTDWKGSG*NSCVLL
Trigger: CAACAACACGCAAGAGTTGCATCCGGATCCTTTCCA...ATCAGTCAGACACTCCCCCAGTGGTGTATGCACTCGTTGTATAAAATGAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR GCA 90 bp AAACATAACCAAAATTTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCCCCTCAGATGTCCCCTaGCCCCTGATTAGTAGAATG +
Preference number: 4 (lower is better)
Translates to: KHNQNFRRGQFLLERATPPSDVP*PLISRM
Trigger: CATTCTACTAATCAGGGGGCAGGGGACATCTGAGGG...GGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAAATTTTGGTTATGTTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp CTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGGAACCCTTTACCTTCTaGATCGGCCAAGTCCCATAT +
Preference number: 4 (lower is better)
Translates to: LFFLQKWQCRINNARDREEPFTF*IGQVPY
Trigger: ATATGGGACTTGGCCGATCCAGAAGGTAAAGGGTTC...CTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000248070.10
ENST00000535753.6
CDS-3UTR CCA 90 bp TTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATGGGTCTTTTCCACTAAACGGGGTGAAATTTAGGCGGTaGCATGCTCAAATTCAGATT +
Preference number: 4 (lower is better)
Translates to: LEGLAAEEGTNGSFPLNGVKFRR*HAQIQI
Trigger: AATCTGAATTTGAGCATGCCACCGCCTAAATTTCAC...CCCGTTTAGTGGAAAAGACCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR CCA 90 bp TTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGGCAGAGCCACGGAATaGGTCACTTTCTTTGAAAGG +
Preference number: 4 (lower is better)
Translates to: FFLQKWQCRINNARDRECGRATE*VTFFER
Trigger: CCTTTCAAAGAAAGTGACCCATTCCGTGGCTCTGCC...ACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp TTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTAAGGGTTTTTCGTGAATaGATCCGAGGTAAATGGGTC +
Preference number: 4 (lower is better)
Translates to: LQKWQCRINNARDRECEVRVFRE*IRGKWV
Trigger: GACCCATTTACCTCGGATCCATTCACGAAAAACCCT...TACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp AAACTGATCCAATTTTGGTTAAGTTTGAGAAGCCCTCTGAACTTGGGTGGTTGGCCCTCTGAACTTGGGTaGTTGGCCCAATGTAAATAC +
Preference number: 4 (lower is better)
Translates to: KLIQFWLSLRSPLNLGGWPSELG*LAQCKY
Trigger: GTATTTACATTGGGCCAACCACCCAAGTTCAGAGGG...CCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAACCAAAATTGGATCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp AAACATAACCAAAATTTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCAGGTCACACCTGTCTTaGTATCAGGGGCTCAAGAGC +
Preference number: 4 (lower is better)
Translates to: KHNQNFRRGQFLLERATPRSHLS*YQGLKS
Trigger: GCTCTTGAGCCCCTGATACCAAGACAGGTGTGACCT...GGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAAATTTTGGTTATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR CAA 72 bp ATCCAATTTTGGTTAAGTTTGAGAAGCCCTCTGAACTaGGGTGGTTGGCCCAATGTAAATACTTCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: IQFWLSLRSPLN*GGWPNVNTSAE
Trigger: CTCTGCGGAAGTATTTACATTGGGCCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAACCAAAATTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp AAACATAACCAAAATTTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCAGGCCAATTCTTACTTaGAAGAGCAACACCCTGGGG +
Preference number: 4 (lower is better)
Translates to: KHNQNFRRGQFLLERATPRPILT*KSNTLG
Trigger: CCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCT...GGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAAATTTTGGTTATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR GCA 90 bp GAGAAACTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACACGCGAATTGGTCTTTaGTTAACTTCCCCGTTTGCC +
Preference number: 4 (lower is better)
Translates to: EKLFFLQKWQCRINNARDTRIGL*LTSPFA
Trigger: GGCAAACGGGGAAGTTAAGCAAAGACCAATTCGCGT...GTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAGTTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp AAACATAACCAAAATTTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCCACCCAGTTCACTGTTaGCTGTGTTTGCTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: KHNQNFRRGQFLLERATPHPVHC*LCLLEA
Trigger: AGCCTCAAGCAAACACAGCCAACAGTGAACTGGGTG...GGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAAATTTTGGTTATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp TTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTATTCAGATCGTCTTCCTaGGACTTTAAGTCAGATTCC +
Preference number: 4 (lower is better)
Translates to: LQKWQCRINNARDRECEVFRSSS*DFKSDS
Trigger: GGAATCTGACTTAAAGTCCCAGGAAGACGATCTGAA...TACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp AAACTGATCCAATTTTGGTTAAGTTTGAGAAGCCCTCTGAACTTGGGTGGTTGGTGTGAACGCGCAAAGTaGCAGCAAAAACAACAGACA +
Preference number: 4 (lower is better)
Translates to: KLIQFWLSLRSPLNLGGWCERAK*QQKQQT
Trigger: TGTCTGTTGTTTTTGCTGCCACTTTGCGCGTTCACA...CCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAACCAAAATTGGATCAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp AGCAACACATTTGCTTTTCAAGGTGTTCCTTGTGGAAACACACATACACATAGAAACTGGGCAATCTCTTaGCTGATGTCATCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: SNTFAFQGVPCGNTHTHRNWAIS*LMSSSS
Trigger: GGAGCTTGATGACATCAGTCAAGAGATTGCCCAGTT...TCTATGTGTATGTGTGTTTCCACAAGGAACACCTTGAAAAGCAAATGTGTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp TTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTTCCAAATGGATCTGTTaGAGTTGTCTGCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: FFLQKWQCRINNARDRECSKWIC*SCLLFC
Trigger: GCAGAACAGCAGACAACTTCAACAGATCCATTTGGA...ACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp TTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTTGGTTGATTTCGTCTTaGGTTGACTTCAGGGACTTG +
Preference number: 4 (lower is better)
Translates to: FFLQKWQCRINNARDRECWLISS*VDFRDL
Trigger: CAAGTCCCTGAAGTCAACGCAAGACGAAATCAACCA...ACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp TCTCCAGAGAGCAAACCATTGATGGGCAAGAGGCTTTCAAAAATCCCATCAAATTCCGGATGCAACTCTTaGGTGTTGTTGCTAAATAAC +
Preference number: 4 (lower is better)
Translates to: SPESKPLMGKRLSKIPSNSGCNS*VLLLNN
Trigger: GTTATTTAGCAACAACACGCAAGAGTTGCATCCGGA...ATTTGATGGGATTTTTGAAAGCCTCTTGCCCATCAATGGTTTGCTCTCTGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR GCA 90 bp AAACATAACCAAAATTTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCGTCTCAGGTAACCTTTaGCCTGCCCAAAAGATGAAC +
Preference number: 4 (lower is better)
Translates to: KHNQNFRRGQFLLERATPVSGNL*PAQKMN
Trigger: GTTCATCTTTTGGGCAGGGCAAAGGTTACCTGAGAC...GGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAAATTTTGGTTATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp GACCTTTATTTCAAAATGAAAACTTCCCGTGTTAAGTTTGACAGCCGTGCTCATGAACCCTTTACCTTCTaGATCGGCCAAGTCCCATAT +
Preference number: 4 (lower is better)
Translates to: DLYFKMKTSRVKFDSRAHEPFTF*IGQVPY
Trigger: ATATGGGACTTGGCCGATCCAGAAGGTAAAGGGTTC...ATGAGCACGGCTGTCAAACTTAACACGGGAAGTTTTCATTTTGAAATAAAGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602151.1
CDS-3UTR CCA 90 bp CTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTTCAGATCGTCTTCCTaGGACTTTAAGTCAGATTCC +
Preference number: 4 (lower is better)
Translates to: LFFLQKWQCRINNARDREFRSSS*DFKSDS
Trigger: GGAATCTGACTTAAAGTCCCAGGAAGACGATCTGAA...CTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp AAACTGATCCAATTTTGGTTAAGTTTGAGAAGCCCTCTGAACTTGGGTGGTTGGTTCAGATCGTCTTCCTaGGACTTTAAGTCAGATTCC +
Preference number: 4 (lower is better)
Translates to: KLIQFWLSLRSPLNLGGWFRSSS*DFKSDS
Trigger: GGAATCTGACTTAAAGTCCCAGGAAGACGATCTGAA...CCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAACCAAAATTGGATCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp GAGAAACTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACGTCAGCTCCTTTAAATaGGTCAGATTTGAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: EKLFFLQKWQCRINNARDVSSFK*VRFEGV
Trigger: GACCCCTTCAAATCTGACCCATTTAAAGGAGCTGAC...GTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAGTTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp TTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGTCAGCTCCTTTAAATaGGTCAGATTTGAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: FFLQKWQCRINNARDRECVSSFK*VRFEGV
Trigger: GACCCCTTCAAATCTGACCCATTTAAAGGAGCTGAC...ACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp TTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTATGGATCCGAGGTAAATaGGTCATTCTTTGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LQKWQCRINNARDRECEVWIRGK*VILCLF
Trigger: AAACAGACAAAGAATGACCCATTTACCTCGGATCCA...TACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp GAGAAACTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACTCTGCGGAACCAAGCTaGCTTACAGGTGTACTTTTA +
Preference number: 4 (lower is better)
Translates to: EKLFFLQKWQCRINNARDSAEPS*LTGVLL
Trigger: TAAAAGTACACCTGTAAGCCAGCTTGGTTCCGCAGA...GTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAGTTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CCA 90 bp AGCAACACATTTGCTTTTCAAGGTGTTCCTTGTGGAAACACACATACACATAGAAGCACCAAGACGAAATaGGAAACTACATGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: SNTFAFQGVPCGNTHTHRSTKTK*ETTCPQ
Trigger: CTGGGGACATGTAGTTTCCCATTTCGTCTTGGTGCT...TCTATGTGTATGTGTGTTTCCACAAGGAACACCTTGAAAAGCAAATGTGTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR TCA 90 bp TTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTATTACTGACCTTCTGCTaGATGAAATACATAGCTAAC +
Preference number: 4 (lower is better)
Translates to: LQKWQCRINNARDRECEVLLTFC*MKYIAN
Trigger: GTTAGCTATGTATTTCATTCAGCAGAAGGTCAGTAA...TACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp TTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTTCCGGATGCAACTCTTaGGTGTTGTTGCTAAATAAC +
Preference number: 4 (lower is better)
Translates to: FFLQKWQCRINNARDRECSGCNS*VLLLNN
Trigger: GTTATTTAGCAACAACACGCAAGAGTTGCATCCGGA...ACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR GCA 90 bp AAACTGATCCAATTTTGGTTAAGTTTGAGAAGCCCTCTGAACTTGGGTGGTTGGAGTTTTTCTTTCGGATaGCAGTTGCAAGTTTCCATG +
Preference number: 4 (lower is better)
Translates to: KLIQFWLSLRSPLNLGGWSFSFG*QLQVSM
Trigger: CATGGAAACTTGCAACTGGCATCCGAAAGAAAAACT...CCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAACCAAAATTGGATCAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp ATGAAATACATAGCTAACGCGAATTGGTCTTTGCTTAACTTCCCCGTTTGCCTCTGGATCCGAGGTAAATaGGTCATTCTTTGTCTGTTT +
Preference number: 4 (lower is better)
Translates to: MKYIANANWSLLNFPVCLWIRGK*VILCLF
Trigger: AAACAGACAAAGAATGACCCATTTACCTCGGATCCA...GAGGCAAACGGGGAAGTTAAGCAAAGACCAATTCGCGTTAGCTATGTATTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CCA 90 bp AAACATAACCAAAATTTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCATACTTCCGCAGAGATaGAGGGCATTCAAAACAGGT +
Preference number: 4 (lower is better)
Translates to: KHNQNFRRGQFLLERATPILPQR*RAFKTG
Trigger: ACCTGTTTTGAATGCCCTCCATCTCTGCGGAAGTAT...GGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAAATTTTGGTTATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp TTTGTCTCCAGAGAGCAAACCATTGATGGGCAAGAGGCTTTCAAAAATCCCATCTTGAAATTTAGGCGGTaGCATGCTCAAATTCAGATT +
Preference number: 4 (lower is better)
Translates to: FVSREQTIDGQEAFKNPILKFRR*HAQIQI
Trigger: AATCTGAATTTGAGCATGCCACCGCCTAAATTTCAA...GATGGGATTTTTGAAAGCCTCTTGCCCATCAATGGTTTGCTCTCTGGAGACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596037.5
CDS-3UTR TCA 90 bp CTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTTACTGACCTTCTGCTaGATGAAATACATAGCTAAC +
Preference number: 4 (lower is better)
Translates to: LFFLQKWQCRINNARDRELLTFC*MKYIAN
Trigger: GTTAGCTATGTATTTCATTCAGCAGAAGGTCAGTAA...CTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR TCA 90 bp GACCTTTATTTCAAAATGAAAACTTCCCGTGTTAAGTTTGACAGCCGTGCTCATATGCCTAGTAATACTTaGCAGTGGAGGAATGTGGAA +
Preference number: 4 (lower is better)
Translates to: DLYFKMKTSRVKFDSRAHMPSNT*QWRNVE
Trigger: TTCCACATTCCTCCACTGTCAAGTATTACTAGGCAT...ATGAGCACGGCTGTCAAACTTAACACGGGAAGTTTTCATTTTGAAATAAAGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602151.1
CDS-3UTR GCA 90 bp AAACATAACCAAAATTTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCCTTTCGGATGCCAGTTaGAAGTTTCCATGTAACGTA +
Preference number: 4 (lower is better)
Translates to: KHNQNFRRGQFLLERATPLSDAS*KFPCNV
Trigger: TACGTTACATGGAAACTTGCAACTGGCATCCGAAAG...GGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAAATTTTGGTTATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CCA 90 bp GTTAAGTTTGAGAAGCCCTCTGAACTTGGGTGGTTGGCCCAATGTAAATACTTCAAACTGATCCAATTTTaGTTAAGTTTGAGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: VKFEKPSELGWLAQCKYFKLIQF*LSLRSP
Trigger: AGGGCTTCTCAAACTTAACCAAAATTGGATCAGTTT...GAAGTATTTACATTGGGCCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
3UTR CAA 72 bp TCTGTCTGGAAAGGATCCGGATGCAACTCTTGCGTGTaGTTGCTAAATAACAAGGCTTTATTTTTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: SVWKGSGCNSCV*LLNNKALFLKG
Trigger: TCCTTTCAAAAATAAAGCCTTGTTATTTAGCAACAACACGCAAGAGTTGCATCCGGATCCTTTCCAGACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR TCA 90 bp TTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTTTACTGACCTTCTGCTaGATGAAATACATAGCTAAC +
Preference number: 4 (lower is better)
Translates to: FFLQKWQCRINNARDRECLLTFC*MKYIAN
Trigger: GTTAGCTATGTATTTCATTCAGCAGAAGGTCAGTAA...ACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp CCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGCCCTCGCCTAGGCCCGAGTCCCGGTCCTaGGAGTACGGTGGCGACGGT +
Preference number: 5 (lower is better)
Translates to: PLWNPPVPCPAYTRPSPRPESRS*EYGGDG
Trigger: ACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGG...CCTAGGCGAGGGCCGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602022.5
CDS-3UTR CAA 90 bp GCACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGCCCAGCATGTCTCGGAGCTaGGCCTTCTGCTGGTCCATC +
Preference number: 5 (lower is better)
Translates to: ALPPLWNPPVPCPAYTRPSMSRS*AFCWSI
Trigger: GATGGACCAGCAGAAGGCCAAGCTCCGAGACATGCT...GGGCCGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp ACATCTGCACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACCCGAGTCCCGGTCCTaGGAGTACGGTGGCGACGGT +
Preference number: 5 (lower is better)
Translates to: TSALPPLWNPPVPCPAYTPESRS*EYGGDG
Trigger: ACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGG...TGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGCAGATGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CAA 90 bp GTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAGGCTCCCTGTGCTGTaGAGGCTGCTGACGCTGCCG +
Preference number: 5 (lower is better)
Translates to: VSPEWLEWIGGLGKVCGTRLPVL*RLLTLP
Trigger: CGGCAGCGTCAGCAGCCTCAACAGCACAGGGAGCCT...GGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp ATCTGCACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGTGCTTGAGGCTGTGCTaGGGGGACAGGCTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: ICTAPSLEPARALSRLHTCLRLC*GDRLPV
Trigger: CACAGGGAGCCTGTCCCCCAAGCACAGCCTCAAGCA...CGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGCAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp GCACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGCCCCACTGTTGGCTGTGTTaGCTTGAGGCTGTGCTTGGG +
Preference number: 5 (lower is better)
Translates to: ALPPLWNPPVPCPAYTRPHCWLC*LEAVLG
Trigger: CCCAAGCACAGCCTCAAGCAAACACAGCCAACAGTG...GGGCCGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp GCACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGCCCTCATCAAATCGCATCTaGTCTGCCACGGGCACCACC +
Preference number: 5 (lower is better)
Translates to: ALPPLWNPPVPCPAYTRPSSNRI*SATGTT
Trigger: GGTGGTGCCCGTGGCAGACAAGATGCGATTTGATGA...GGGCCGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp GCACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGCCCTGGAACGGGTCGCCTTaGAAGGGGTCAGCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: ALPPLWNPPVPCPAYTRPWNGSP*KGSAPL
Trigger: TAAAGGAGCTGACCCCTTCAAAGGCGACCCGTTCCA...GGGCCGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp ACACCACTGGGGGAGTGTCTGACTGATGCGTGGGAGGGCGGGTGGGGATGTCTGTTCTCGCTCTCCCGCTaGGCCCACGCCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: TPLGECLTDAWEGGWGCLFSLSR*AHASCC
Trigger: GCAGCAGCTGGCGTGGGCCAAGCGGGAGAGCGAGAA...CAGACATCCCCACCCGCCCTCCCACGCATCAGTCAGACACTCCCCCAGTGGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CAA 90 bp AGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGAGGCTCCCTGTGCTGTaGAGGCTGCTGACGCTGCCG +
Preference number: 5 (lower is better)
Translates to: SPEWLEWIGGLGKVCGTKRLPVL*RLLTLP
Trigger: CGGCAGCGTCAGCAGCCTCAACAGCACAGGGAGCCT...CTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp GGGGGCCAGACACAAGAGACAGATGAGCTCGCCAGCAGTGCCTTCCCAGCAGCCAGGCTCCCTGTGCTGTaGAGGCTGCTGACGCTGCCG +
Preference number: 5 (lower is better)
Translates to: GGQTQETDELASSAFPAARLPVL*RLLTLP
Trigger: CGGCAGCGTCAGCAGCCTCAACAGCACAGGGAGCCT...GGCTGCTGGGAAGGCACTGCTGGCGAGCTCATCTGTCTCTTGTGTCTGGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp CAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAACGCCTTCGCTCAGGTaGGCCAGGTCGGTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: QKSQGSCKRKGVGWPGGGTPSLR*ARSVRL
Trigger: CAGCCTGACCGACCTGGCCAACCTGAGCGAAGGCGT...TCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp CAGGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTACGCCTTCGCTCAGGTaGGCCAGGTCGGTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: QVLQPSLLTLNKPPSPGPTPSLR*ARSVRL
Trigger: CAGCCTGACCGACCTGGCCAACCTGAGCGAAGGCGT...AGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp AGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGACGCCTTCGCTCAGGTaGGCCAGGTCGGTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SPEWLEWIGGLGKVCGTKTPSLR*ARSVRL
Trigger: CAGCCTGACCGACCTGGCCAACCTGAGCGAAGGCGT...CTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp CCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGACGCCTTCGCTCAGGTaGGCCAGGTCGGTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: PEWLEWIGGLGKVCGTKLTPSLR*ARSVRL
Trigger: CAGCCTGACCGACCTGGCCAACCTGAGCGAAGGCGT...CAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp CTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGCCCTCGAAACCCCTTTTTACTTaGGAACGGGTCGCCGCTGTC +
Preference number: 5 (lower is better)
Translates to: LPPLWNPPVPCPAYTRPSKPLFT*ERVAAV
Trigger: GACAGCGGCGACCCGTTCCAAAGTAAAAAGGGGTTT...CGAGGGCCGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp ACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTACCCGAGTCCCGGTCCTaGGAGTACGGTGGCGACGGT +
Preference number: 5 (lower is better)
Translates to: TSPRVPVLGVRWRRCVCVPESRS*EYGGDG
Trigger: ACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGG...TACACACACACACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CAA 90 bp GCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAAGGCTCCCTGTGCTGTaGAGGCTGCTGACGCTGCCG +
Preference number: 5 (lower is better)
Translates to: ALGASSPRLTAVCSSPEERLPVL*RLLTLP
Trigger: CGGCAGCGTCAGCAGCCTCAACAGCACAGGGAGCCT...TTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp CAGGCAGGACGGGGACGGCGCCAGGGAACACAGTCTTCTTTCTCTTGGAGGGTGAGGCTCCCTGTGCTGTaGAGGCTGCTGACGCTGCCG +
Preference number: 5 (lower is better)
Translates to: QAGRGRRQGTQSSFSWRVRLPVL*RLLTLP
Trigger: CGGCAGCGTCAGCAGCCTCAACAGCACAGGGAGCCT...CACCCTCCAAGAGAAAGAAGACTGTGTTCCCTGGCGCCGTCCCCGTCCTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000593760.5
CDS-3UTR CAA 90 bp CCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGTGCTTGAGGCTGTGCTaGGGGGACAGGCTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: PSGWNGSGASGKSAEPSWCLRLC*GDRLPV
Trigger: CACAGGGAGCCTGTCCCCCAAGCACAGCCTCAAGCA...CCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp AAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGACCAGAAGGTGGGGGCTaGGACATCTGGCTGAAGTCG +
Preference number: 5 (lower is better)
Translates to: KSQGSCKRKGVGWPGGGGPEGGG*DIWLKS
Trigger: CGACTTCAGCCAGATGTCCAAGCCCCCACCTTCTGG...TCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248070.10
ENST00000592031.5
CDS-3UTR CAA 90 bp AGGCGGGGAAGCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCGCAGGCATGTCAGCCTaGCTGAGCGCGATGGCCAGT +
Preference number: 5 (lower is better)
Translates to: RRGSPGCFLSSTDRCVFVAGMSA*LSAMAS
Trigger: ACTGGCCATCGCGCTCAGCAAGGCTGACATGCCTGC...GACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGCTTCCCCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CAA 90 bp CCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGGCAGGCATGTCAGCCTaGCTGAGCGCGATGGCCAGT +
Preference number: 5 (lower is better)
Translates to: PSGWNGSGASGKSAEPSWAGMSA*LSAMAS
Trigger: ACTGGCCATCGCGCTCAGCAAGGCTGACATGCCTGC...CCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602022.5
CDS GCA 90 bp AAAGTAGTGGTGGGGGCTGCCACCTGGGCATTTGGATCCACCAGCTaGAGCCTGAGAGGTCTGCAGCGACCAGGCCACTACCCAGGAGGC +
Preference number: 5 (lower is better)
Translates to: KVVVGAATWAFGSTS*SLRGLQRPGHYPGG
Trigger: GCCTCCTGGGTAGTGGCCTGGTCGCTGCAGACCTCTCAGGCTGCAGCTGGTGGATCCAAATGCCCAGGTGGCAGCCCCCACCACTACTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595845.1
CDS-3UTR CAA 90 bp CATCCATGGCTCCAAAACTGCCCCTCTCTGCCAGGGAGACGCCTTCGCTCAGGTAGGCTCCCTGTGCTGTaGAGGCTGCTGACGCTGCCG +
Preference number: 5 (lower is better)
Translates to: HPWLQNCPSLPGRRLRSGRLPVL*RLLTLP
Trigger: CGGCAGCGTCAGCAGCCTCAACAGCACAGGGAGCCT...ACCTGAGCGAAGGCGTCTCCCTGGCAGAGAGGGGCAGTTTTGGAGCCATGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CAA 90 bp AGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCTGCTTGAGGCTGTGCTaGGGGGACAGGCTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: RQKSQGSCKRKGVGWPGGCLRLC*GDRLPV
Trigger: CACAGGGAGCCTGTCCCCCAAGCACAGCCTCAAGCA...GCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp ATCTGCACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGCACTGTTGGCTGTGTTaGCTTGAGGCTGTGCTTGGG +
Preference number: 5 (lower is better)
Translates to: ICTAPSLEPARALSRLHTHCWLC*LEAVLG
Trigger: CCCAAGCACAGCCTCAAGCAAACACAGCCAACAGTG...CGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGCAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp AGGCGGGGAAGCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCGTCCGGCGAGAGGACTaGAGGAGGGTCGATGCCTTT +
Preference number: 5 (lower is better)
Translates to: RRGSPGCFLSSTDRCVFVVRRED*RRVDAF
Trigger: AAAGGCATCGACCCTCCTCAAGTCCTCTCGCCGGAC...GACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGCTTCCCCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp CGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGCGTCCGGCGAGAGGACTaGAGGAGGGTCGATGCCTTT +
Preference number: 5 (lower is better)
Translates to: RVAGMDRGPRESLRNQAGVRRED*RRVDAF
Trigger: AAAGGCATCGACCCTCCTCAAGTCCTCTCGCCGGAC...GCCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp GGGGGCCAGACACAAGAGACAGATGAGCTCGCCAGCAGTGCCTTCCCAGCAGCCGTCCGGCGAGAGGACTaGAGGAGGGTCGATGCCTTT +
Preference number: 5 (lower is better)
Translates to: GGQTQETDELASSAFPAAVRRED*RRVDAF
Trigger: AAAGGCATCGACCCTCCTCAAGTCCTCTCGCCGGAC...GGCTGCTGGGAAGGCACTGCTGGCGAGCTCATCTGTCTCTTGTGTCTGGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp CAGGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTGTCCGGCGAGAGGACTaGAGGAGGGTCGATGCCTTT +
Preference number: 5 (lower is better)
Translates to: QVLQPSLLTLNKPPSPGPVRRED*RRVDAF
Trigger: AAAGGCATCGACCCTCCTCAAGTCCTCTCGCCGGAC...AGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp CACCAAGGAAACATCCAGACATGCGCGGCCCGGCCCATCCGCTCCCGGAACAGCCTCGTCCAGGCGGTCTaGAGCATCCTGTTTCTGAGC +
Preference number: 5 (lower is better)
Translates to: HQGNIQTCAARPIRSRNSLVQAV*SILFLS
Trigger: GCTCAGAAACAGGATGCTCAAGACCGCCTGGACGAG...GCTGTTCCGGGAGCGGATGGGCCGGGCCGCGCATGTCTGGATGTTTCCTTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp GCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCCTCGTCCAGGCGGTCTaGAGCATCCTGTTTCTGAGC +
Preference number: 5 (lower is better)
Translates to: APSGWNGSGASGKSAEPSLVQAV*SILFLS
Trigger: GCTCAGAAACAGGATGCTCAAGACCGCCTGGACGAG...GCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp GCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCAGCATGTCTCGGAGCTaGGCCTTCTGCTGGTCCATC +
Preference number: 5 (lower is better)
Translates to: APSGWNGSGASGKSAEPSSMSRS*AFCWSI
Trigger: GATGGACCAGCAGAAGGCCAAGCTCCGAGACATGCT...GCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp ACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACACGGCCCTCAAGCCTTCAGCACTATaGAAGGACCCACTTCCGAAG +
Preference number: 5 (lower is better)
Translates to: TAPSLEPARALSRLHTALKPSAL*KDPLPK
Trigger: CTTCGGAAGTGGGTCCTTCAATAGTGCTGAAGGCTT...GAGGGCCGTGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp CCTGTGCTGTTGAGGCTGCTGACGCTGCCGTGGGACGGCGTGGAGCGGAGGCTGTTCATGAGGACTGGCTaGACTTTGTCTCCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: PVLLRLLTLPWDGVERRLFMRTG*TLSPES
Trigger: GCTCTCTGGAGACAAAGTCAAGCCAGTCCTCATGAA...CAGCCTCCGCTCCACGCCGTCCCACGGCAGCGTCAGCAGCCTCAACAGCACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000593760.5
CDS-3UTR CAA 90 bp CAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGTTGGCTGTGTTTGCTaGAGGCTGTGCTTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: QPRVAGMDRGPRESLRNQVGCVC*RLCLGD
Trigger: GTCCCCCAAGCACAGCCTCAAGCAAACACAGCCAAC...TTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp CCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGTTGGCTGTGTTTGCTaGAGGCTGTGCTTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: PRVAGMDRGPRESLRNQAVGCVC*RLCLGD
Trigger: GTCCCCCAAGCACAGCCTCAAGCAAACACAGCCAAC...AGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp AGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGACTCAACTCACTGTTGGCTGTGTTaGCTTGAGGCTGTGCTTGGG +
Preference number: 5 (lower is better)
Translates to: REAASGREWGGPEAEDSTHCWLC*LEAVLG
Trigger: CCCAAGCACAGCCTCAAGCAAACACAGCCAACAGTG...AGTTGAGTCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp AAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGACTCAACTTACAGTCCGGCGAGAGGACTaGAGGAGGGTCGATGCCTTT +
Preference number: 5 (lower is better)
Translates to: KLQAEGSGVARRRRTQLTVRRED*RRVDAF
Trigger: AAAGGCATCGACCCTCCTCAAGTCCTCTCGCCGGAC...TGTAAGTTGAGTCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp GGCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCCCGAGGCGTCCGGCGAGAGGACTaGAGGAGGGTCGATGCCTTT +
Preference number: 5 (lower is better)
Translates to: GPEAEDSTYRGEVCKARGVRRED*RRVDAF
Trigger: AAAGGCATCGACCCTCCTCAAGTCCTCTCGCCGGAC...GCCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp TGTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCTCGTCCAGGCGGTCTaGAGCATCCTGTTTCTGAGC +
Preference number: 5 (lower is better)
Translates to: CQPRVAGMDRGPRESLRNLVQAV*SILFLS
Trigger: GCTCAGAAACAGGATGCTCAAGACCGCCTGGACGAG...GTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp AAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGCGGTTCAGCTCCGACTaGGCTCGGTTCAGATCGTCT +
Preference number: 5 (lower is better)
Translates to: KNPREAASGREWGGPEAERFSSD*ARFRSS
Trigger: AGACGATCTGAACCGAGCCAAGTCGGAGCTGAACCG...CTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp CGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGCCGGTTCAGCTCCGACTaGGCTCGGTTCAGATCGTCT +
Preference number: 5 (lower is better)
Translates to: RVAGMDRGPRESLRNQAGRFSSD*ARFRSS
Trigger: AGACGATCTGAACCGAGCCAAGTCGGAGCTGAACCG...GCCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp AGTGGGGTGGCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGACGCCTTCGCTCAGGTaGGCCAGGTCGGTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SGVARRRRTQLTEVKSAKTPSLR*ARSVRL
Trigger: CAGCCTGACCGACCTGGCCAACCTGAGCGAAGGCGT...CTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGCCACCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp AGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGACTCAACTTGGAACGGGTCGCCTTaGAAGGGGTCAGCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: REAASGREWGGPEAEDSTWNGSP*KGSAPL
Trigger: TAAAGGAGCTGACCCCTTCAAAGGCGACCCGTTCCA...AGTTGAGTCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp CTGGCAGGCAGGACGGGGACGGCGCCAGGGAACACAGTCTTCTTTCTCTTGGAGCCAGAAGGTGGGGGCTaGGACATCTGGCTGAAGTCG +
Preference number: 5 (lower is better)
Translates to: LAGRTGTAPGNTVFFLLEPEGGG*DIWLKS
Trigger: CGACTTCAGCCAGATGTCCAAGCCCCCACCTTCTGG...CTCCAAGAGAAAGAAGACTGTGTTCCCTGGCGCCGTCCCCGTCCTGCCTGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CAA 90 bp TCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCACCCTGAATTCTCGCTCTCCCGCTaGGCCCACGCCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SPGDVTFPGLAAESAHPEFSLSR*AHASCC
Trigger: GCAGCAGCTGGCGTGGGCCAAGCGGGAGAGCGAGAA...TTCAGGGTGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CAA 90 bp CTGTGCTTGGGGGACAGGCTCCCTGTGCTGTTGAGGCTGCTGACGCTGCCGTGGACAGTCTTCTTTCTCTaGGAGGGTGGGATGAGGGAC +
Preference number: 5 (lower is better)
Translates to: LCLGDRLPVLLRLLTLPWTVFFL*EGGMRD
Trigger: GTCCCTCATCCCACCCTCCAAGAGAAAGAAGACTGT...CCACGGCAGCGTCAGCAGCCTCAACAGCACAGGGAGCCTGTCCCCCAAGCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000593760.5
CDS-3UTR CAA 90 bp TTCCAGGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTGTTGGCTGTGTTTGCTaGAGGCTGTGCTTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: FQVLQPSLLTLNKPPSPGVGCVC*RLCLGD
Trigger: GTCCCCCAAGCACAGCCTCAAGCAAACACAGCCAAC...ACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGACCTGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp CAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAACACTGTTGGCTGTGTTaGCTTGAGGCTGTGCTTGGG +
Preference number: 5 (lower is better)
Translates to: QPRVAGMDRGPRESLRNQHCWLC*LEAVLG
Trigger: CCCAAGCACAGCCTCAAGCAAACACAGCCAACAGTG...TTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp CCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGCACTGTTGGCTGTGTTaGCTTGAGGCTGTGCTTGGG +
Preference number: 5 (lower is better)
Translates to: PSGWNGSGASGKSAEPSWHCWLC*LEAVLG
Trigger: CCCAAGCACAGCCTCAAGCAAACACAGCCAACAGTG...CCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp AAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGTCATCAAATCGCATCTaGTCTGCCACGGGCACCACC +
Preference number: 5 (lower is better)
Translates to: KNPREAASGREWGGPEAESSNRI*SATGTT
Trigger: GGTGGTGCCCGTGGCAGACAAGATGCGATTTGATGA...CTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp CCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTTCATCAAATCGCATCTaGTCTGCCACGGGCACCACC +
Preference number: 5 (lower is better)
Translates to: PRVAGMDRGPRESLRNQASSNRI*SATGTT
Trigger: GGTGGTGCCCGTGGCAGACAAGATGCGATTTGATGA...AGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp AAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGAGCTCCTGCAAACTGCTaGTTTCCCGGTCTAGGTCAT +
Preference number: 5 (lower is better)
Translates to: KSQGSCKRKGVGWPGGGGAPANC*FPGLGH
Trigger: ATGACCTAGACCGGGAAACAAGCAGTTTGCAGGAGC...TCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp GAGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCTCGTCCAGGCGGTCTaGAGCATCCTGTTTCTGAGC +
Preference number: 5 (lower is better)
Translates to: ETKIPGKLQAEGSGVARRLVQAV*SILFLS
Trigger: GCTCAGAAACAGGATGCTCAAGACCGCCTGGACGAG...CCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp GCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAACTCGTCCAGGCGGTCTaGAGCATCCTGTTTCTGAGC +
Preference number: 5 (lower is better)
Translates to: ALGASSPRLTAVCSSPEELVQAV*SILFLS
Trigger: GCTCAGAAACAGGATGCTCAAGACCGCCTGGACGAG...TTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp GGCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCCCGAGGCCTCGTCCAGGCGGTCTaGAGCATCCTGTTTCTGAGC +
Preference number: 5 (lower is better)
Translates to: GPEAEDSTYRGEVCKARGLVQAV*SILFLS
Trigger: GCTCAGAAACAGGATGCTCAAGACCGCCTGGACGAG...GCCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp AAGGAAGAGGAGTCCACTTGCGACAACCAGAAACGACCAGGACGCCTGAGGGACACGCCTTCGCTCAGGTaGGCCAGGTCGGTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: KEEESTCDNQKRPGRLRDTPSLR*ARSVRL
Trigger: CAGCCTGACCGACCTGGCCAACCTGAGCGAAGGCGT...GTCCCTCAGGCGTCCTGGTCGTTTCTGGTTGTCGCAAGTGGACTCCTCTTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CAA 90 bp TGTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACTGGAACGGGTCGCCTTaGAAGGGGTCAGCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: CQPRVAGMDRGPRESLRNWNGSP*KGSAPL
Trigger: TAAAGGAGCTGACCCCTTCAAAGGCGACCCGTTCCA...GTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS CCA 90 bp CTTATCTGCTACCAAAGTAGTGGTGGGGGCTGCCACCTGGGCATTTaGATCCACCAGCTGCAGCCTGAGAGGTCTGCAGCGACCAGGCCA +
Preference number: 5 (lower is better)
Translates to: LICYQSSGGGCHLGI*IHQLQPERSAATRP
Trigger: TGGCCTGGTCGCTGCAGACCTCTCAGGCTGCAGCTGGTGGATCCAAATGCCCAGGTGGCAGCCCCCACCACTACTTTGGTAGCAGATAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595845.1
CDS-3UTR CAA 90 bp CGGGGAAGCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGGACTGGCTTGACTTaGTCTCCAGAGAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: RGSPGCFLSSTDRCVFVPRTGLT*SPESKP
Trigger: TGGTTTGCTCTCTGGAGACAAAGTCAAGCCAGTCCT...GGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGCTTCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp GCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTTCATGAGGACTGGCTaGACTTTGTCTCCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: APSGWNGSGASGKSAEPSFMRTG*TLSPES
Trigger: GCTCTCTGGAGACAAAGTCAAGCCAGTCCTCATGAA...GCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp GGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGACTCAACTTATCCAAGTGCCCATCCTaGTCAATGTCACTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: GSCKRKGVGWPGGGGLNLSKCPS*SMSLRS
Trigger: GGACCTCAGTGACATTGACAAGGATGGGCACTTGGA...TAAGTTGAGTCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp CAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGATCCAAGTGCCCATCCTaGTCAATGTCACTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: QKSQGSCKRKGVGWPGGGSKCPS*SMSLRS
Trigger: GGACCTCAGTGACATTGACAAGGATGGGCACTTGGA...TCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp CCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGTCCAAGTGCCCATCCTaGTCAATGTCACTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: PSGWNGSGASGKSAEPSWSKCPS*SMSLRS
Trigger: GGACCTCAGTGACATTGACAAGGATGGGCACTTGGA...CCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp GCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTACAGTCTTCTTTCTCTaGGAGGGTGGGATGAGGGAC +
Preference number: 5 (lower is better)
Translates to: AESAHPEQAPESRSLEYGTVFFL*EGGMRD
Trigger: GTCCCTCATCCCACCCTCCAAGAGAAAGAAGACTGT...ACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp AGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGACAGTCTTCTTTCTCTaGGAGGGTGGGATGAGGGAC +
Preference number: 5 (lower is better)
Translates to: SPEWLEWIGGLGKVCGTKTVFFL*EGGMRD
Trigger: GTCCCTCATCCCACCCTCCAAGAGAAAGAAGACTGT...CTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp CTGGAACCAACGTTGGCCATGAACAGATCTGGCGGGTGGGATGTTCTGCTGTCAAGGCTCCCTGTGCTGTaGAGGCTGCTGACGCTGCCG +
Preference number: 5 (lower is better)
Translates to: LEPTLAMNRSGGWDVLLSRLPVL*RLLTLP
Trigger: CGGCAGCGTCAGCAGCCTCAACAGCACAGGGAGCCT...TGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCCAACGTTGGTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp CCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAAGGCTCCCTGTGCTGTaGAGGCTGCTGACGCTGCCG +
Preference number: 5 (lower is better)
Translates to: PGDVTFPGLAAESAHPEQRLPVL*RLLTLP
Trigger: CGGCAGCGTCAGCAGCCTCAACAGCACAGGGAGCCT...TTGTTCAGGGTGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp AAGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCATGCTTGAGGCTGTGCTaGGGGGACAGGCTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: KGFPRRCDLSRSCSRVCSCLRLC*GDRLPV
Trigger: CACAGGGAGCCTGTCCCCCAAGCACAGCCTCAAGCA...TGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp GTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGGCTCCTGCAAACTGCTaGTTTCCCGGTCTAGGTCAT +
Preference number: 5 (lower is better)
Translates to: VLQPSLLTLNKPPSPGPWAPANC*FPGLGH
Trigger: ATGACCTAGACCGGGAAACAAGCAGTTTGCAGGAGC...CCAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp CCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGGCTCCTGCAAACTGCTaGTTTCCCGGTCTAGGTCAT +
Preference number: 5 (lower is better)
Translates to: PSGWNGSGASGKSAEPSWAPANC*FPGLGH
Trigger: ATGACCTAGACCGGGAAACAAGCAGTTTGCAGGAGC...CCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp CGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGCGCTCCTGCAAACTGCTaGTTTCCCGGTCTAGGTCAT +
Preference number: 5 (lower is better)
Translates to: RVAGMDRGPRESLRNQAGAPANC*FPGLGH
Trigger: ATGACCTAGACCGGGAAACAAGCAGTTTGCAGGAGC...GCCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp GCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCCCGAGGCACGGTTCAGCTCCGACTaGGCTCGGTTCAGATCGTCT +
Preference number: 5 (lower is better)
Translates to: ARRRRTQLTEVKSAKPEARFSSD*ARFRSS
Trigger: AGACGATCTGAACCGAGCCAAGTCGGAGCTGAACCG...TGCCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp GGCCATGAACAGATCTGGCGGGTGGGATGTTCTGCTGTCACACCAGGGGACCAGCGGTTCAGCTCCGACTaGGCTCGGTTCAGATCGTCT +
Preference number: 5 (lower is better)
Translates to: GHEQIWRVGCSAVTPGDQRFSSD*ARFRSS
Trigger: AGACGATCTGAACCGAGCCAAGTCGGAGCTGAACCG...CTGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp GAGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGTGGAACGGGTCGCCTTaGAAGGGGTCAGCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: ETKIPGKLQAEGSGVARRWNGSP*KGSAPL
Trigger: TAAAGGAGCTGACCCCTTCAAAGGCGACCCGTTCCA...CCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp AAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGAAGGGATCTGATCCTTTaGAGGAGACACTGGAGGATG +
Preference number: 5 (lower is better)
Translates to: KSQGSCKRKGVGWPGGGGRDLIL*RRHWRM
Trigger: CATCCTCCAGTGTCTCCTCAAAAGGATCAGATCCCT...TCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp ACATCTGCACTGCCCCCTCTCTGGAACCCGCCCGTGCCCTGTCCCGCCTACACAAGGGATCTGATCCTTTaGAGGAGACACTGGAGGATG +
Preference number: 5 (lower is better)
Translates to: TSALPPLWNPPVPCPAYTRDLIL*RRHWRM
Trigger: CATCCTCCAGTGTCTCCTCAAAAGGATCAGATCCCT...TGTGTAGGCGGGACAGGGCACGGGCGGGTTCCAGAGAGGGGGCAGTGCAGATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp CAGGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTAAACCCCTTTTTACTTaGGAACGGGTCGCCGCTGTC +
Preference number: 5 (lower is better)
Translates to: QVLQPSLLTLNKPPSPGPKPLFT*ERVAAV
Trigger: GACAGCGGCGACCCGTTCCAAAGTAAAAAGGGGTTT...AGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp TCTCTCCGAAGGCGGGACCATGTCCGGCGAGAGGACTTGAGGAGGGTCGATGCCAAACCCCTTTTTACTTaGGAACGGGTCGCCGCTGTC +
Preference number: 5 (lower is better)
Translates to: SLRRRDHVRREDLRRVDAKPLFT*ERVAAV
Trigger: GACAGCGGCGACCCGTTCCAAAGTAAAAAGGGGTTT...GGCATCGACCCTCCTCAAGTCCTCTCGCCGGACATGGTCCCGCCTTCGGAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CAA 90 bp TGTAAGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCGCAGGCATGTCAGCCTaGCTGAGCGCGATGGCCAGT +
Preference number: 5 (lower is better)
Translates to: CKGFPRRCDLSRSCSRVCAGMSA*LSAMAS
Trigger: ACTGGCCATCGCGCTCAGCAAGGCTGACATGCCTGC...GCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCTTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455140.7
ENST00000594851.5
ENST00000602022.5
CDS-3UTR CAA 90 bp CGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCAGGGGCAGACTCTGGTGACAGCCGCCTGCACTaGGCTGGAACCAACGTTGGC +
Preference number: 5 (lower is better)
Translates to: RNGKLHVPRFEAAGADSGDSRLH*AGTNVG
Trigger: GCCAACGTTGGTTCCAGCCAAGTGCAGGCGGCTGTC...ACCAGAGTCTGCCCCTGCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp CAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAAGGACTGGCTTGACTTaGTCTCCAGAGAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: QKSQGSCKRKGVGWPGGGRTGLT*SPESKP
Trigger: TGGTTTGCTCTCTGGAGACAAAGTCAAGCCAGTCCT...TCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp TCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGGACTGGCTTGACTTaGTCTCCAGAGAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: SAPSGWNGSGASGKSAEPRTGLT*SPESKP
Trigger: TGGTTTGCTCTCTGGAGACAAAGTCAAGCCAGTCCT...TGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp CGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGCAGGACTGGCTTGACTTaGTCTCCAGAGAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: RVAGMDRGPRESLRNQAGRTGLT*SPESKP
Trigger: TGGTTTGCTCTCTGGAGACAAAGTCAAGCCAGTCCT...GCCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp GCAAAGCCCGAGGCAGAGGCCTTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATTGCTTGAGGCTGTGCTaGGGGGACAGGCTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: AKPEAEALEGLAAEEGTNCLRLC*GDRLPV
Trigger: CACAGGGAGCCTGTCCCCCAAGCACAGCCTCAAGCA...ATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAAGGCCTCTGCCTCGGGCTTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR CAA 90 bp CCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGCTTGAGGCTGTGCTaGGGGGACAGGCTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: PGGGYGNHLITSPREKRVCLRLC*GDRLPV
Trigger: CACAGGGAGCCTGTCCCCCAAGCACAGCCTCAAGCA...TACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp GCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCAACGCGAATTGGTCTTaGCTTAACTTCCCCGTTTGC +
Preference number: 5 (lower is better)
Translates to: APSGWNGSGASGKSAEPSNANWS*LNFPVC
Trigger: GCAAACGGGGAAGTTAAGCAAAGACCAATTCGCGTT...GCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp AGTGGGGTGGCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGAGCATGTCTCGGAGCTaGGCCTTCTGCTGGTCCATC +
Preference number: 5 (lower is better)
Translates to: SGVARRRRTQLTEVKSAKSMSRS*AFCWSI
Trigger: GATGGACCAGCAGAAGGCCAAGCTCCGAGACATGCT...CTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGCCACCCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp AGTGGGGTGGCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCGGTTCAGCTCCGACTaGGCTCGGTTCAGATCGTCT +
Preference number: 5 (lower is better)
Translates to: SGVARRRRTQLTEVKSAKRFSSD*ARFRSS
Trigger: AGACGATCTGAACCGAGCCAAGTCGGAGCTGAACCG...CTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGCCACCCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp CAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGTTGACTTCAGGGACTaGATGATGGTTTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: QPRVAGMDRGPRESLRNQVDFRD*MMVSSW
Trigger: CCAGCTGGAAACCATCATCAAGTCCCTGAAGTCAAC...TTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp CCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGTTGACTTCAGGGACTaGATGATGGTTTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: PEWLEWIGGLGKVCGTKLVDFRD*MMVSSW
Trigger: CCAGCTGGAAACCATCATCAAGTCCCTGAAGTCAAC...CAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp TCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAGAGCGGGAGGCAGTCAGCCCGTTGACTTCAGGGACTaGATGATGGTTTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: STDRCVFVPRGRAGGSQPVDFRD*MMVSSW
Trigger: CCAGCTGGAAACCATCATCAAGTCCCTGAAGTCAAC...GGGCTGACTGCCTCCCGCTCTTCCTCTGGGGACGAACACACAGCGGTCAGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp TCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCATTGCTCCTTGCCTGGTaGATTTCGTCTTGCGTTGAC +
Preference number: 5 (lower is better)
Translates to: SAPSGWNGSGASGKSAEPLLLAW*ISSCVD
Trigger: GTCAACGCAAGACGAAATCAACCAGGCAAGGAGCAA...TGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp ACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGACGGTGTGTTTGCTCCTTGCCTGGTaGATTTCGTCTTGCGTTGAC +
Preference number: 5 (lower is better)
Translates to: TLNKPPSPGPWSTVATVCLLLAW*ISSCVD
Trigger: GTCAACGCAAGACGAAATCAACCAGGCAAGGAGCAA...ACACACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp GGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCTGGGGCGCTGCTTGCCATTACGCCTTCGCTCAGGTaGGCCAGGTCGGTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: GEANSYLKEQHPGALLAITPSLR*ARSVRL
Trigger: CAGCCTGACCGACCTGGCCAACCTGAGCGAAGGCGT...AATGGCAAGCAGCGCCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp ACACGGGGCAGCCAAGGGAGACTGCCCAGTCACACTGGCACCTGGGGCACCTGGATGGATCTGTTGAAGTaGTCTGCTGTTCTGCAAAGG +
Preference number: 5 (lower is better)
Translates to: TRGSQGRLPSHTGTWGTWMDLLK*SAVLQR
Trigger: CCTTTGCAGAACAGCAGACAACTTCAACAGATCCAT...CCAGGTGCCCCAGGTGCCAGTGTGACTGGGCAGTCTCCCTTGGCTGCCCCGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CAA 90 bp ACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGACGGTGTGTAGGGATCTGATCCTTTaGAGGAGACACTGGAGGATG +
Preference number: 5 (lower is better)
Translates to: TLNKPPSPGPWSTVATVCRDLIL*RRHWRM
Trigger: CATCCTCCAGTGTCTCCTCAAAAGGATCAGATCCCT...ACACACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp TCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGGGATCTGATCCTTTaGAGGAGACACTGGAGGATG +
Preference number: 5 (lower is better)
Translates to: SAPSGWNGSGASGKSAEPRDLIL*RRHWRM
Trigger: CATCCTCCAGTGTCTCCTCAAAAGGATCAGATCCCT...TGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp AAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGAAGCCTTCAGCACTATaGAAGGACCCACTTCCGAAG +
Preference number: 5 (lower is better)
Translates to: KNPREAASGREWGGPEAEKPSAL*KDPLPK
Trigger: CTTCGGAAGTGGGTCCTTCAATAGTGCTGAAGGCTT...CTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp CCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGAAGCCTTCAGCACTATaGAAGGACCCACTTCCGAAG +
Preference number: 5 (lower is better)
Translates to: PSGWNGSGASGKSAEPSWKPSAL*KDPLPK
Trigger: CTTCGGAAGTGGGTCCTTCAATAGTGCTGAAGGCTT...CCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp AGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGAGCTGCTGCTCCTCATaGCCAAAAGAGGTGAAGTCT +
Preference number: 5 (lower is better)
Translates to: SLLTLNKPPSPGPWSTVASCCSS*PKEVKS
Trigger: AGACTTCACCTCTTTTGGCAATGAGGAGCAGCAGCT...CGCCACCGTACTCCAAGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp GTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAGGTGTACTTTTACCTaGGACATCTGGCTGAAGTCG +
Preference number: 5 (lower is better)
Translates to: VSPEWLEWIGGLGKVCGTRCTFT*DIWLKS
Trigger: CGACTTCAGCCAGATGTCCAAGGTAAAAGTACACCT...GGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp GGGGGCCAGACACAAGAGACAGATGAGCTCGCCAGCAGTGCCTTCCCAGCAGCCGGCCTATCTTGGACTTaGTTCTGGAAGCCAGGATTC +
Preference number: 5 (lower is better)
Translates to: GGQTQETDELASSAFPAAGLSWT*FWKPGF
Trigger: GAATCCTGGCTTCCAGAACAAAGTCCAAGATAGGCC...GGCTGCTGGGAAGGCACTGCTGGCGAGCTCATCTGTCTCTTGTGTCTGGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp TTTCCAGGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGAGCTGCTGCTCCTCATaGCCAAATTTGGAACGGGTC +
Preference number: 5 (lower is better)
Translates to: FPGLAAESAHPEQAPESRSCCSS*PNLERV
Trigger: GACCCGTTCCAAATTTGGCAATGAGGAGCAGCAGCT...CCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGACCTGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594851.5
CDS-3UTR CAA 90 bp TTGTGGCTACTGCCTCTTCCCGCAGCGTGGATAATGCCTGGGCCTCTGCAGGTGTTCTGTGATCACAAGTaGCGACCGCTGCCAACCCCA +
Preference number: 5 (lower is better)
Translates to: LWLLPLPAAWIMPGPLQVFCDHK*RPLPTP
Trigger: TGGGGTTGGCAGCGGTCGCAACTTGTGATCACAGAA...CACCTGCAGAGGCCCAGGCATTATCCACGCTGCGGGAAGAGGCAGTAGCCACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CAA 90 bp TTGTGGCTACTGCCTCTTCCCGCAGCGTGGATAATGCCTGGGCCTCTGCAGGTGGGAAGAGGAGTCCACTaGCGACAACCAGAAACGACC +
Preference number: 5 (lower is better)
Translates to: LWLLPLPAAWIMPGPLQVGRGVH*RQPETT
Trigger: GGTCGTTTCTGGTTGTCGCAAGTGGACTCCTCTTCC...CACCTGCAGAGGCCCAGGCATTATCCACGCTGCGGGAAGAGGCAGTAGCCACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS CCA 90 bp TCGGGTTTCTTATCTGCTACCAAAGTAGTGGTGGGGGCTGCCACCTaGGCATTTGGATCCACCAGCTGCAGCCTGAGAGGTCTGCAGCGA +
Preference number: 5 (lower is better)
Translates to: SGFLSATKVVVGAAT*AFGSTSCSLRGLQR
Trigger: TCGCTGCAGACCTCTCAGGCTGCAGCTGGTGGATCCAAATGCCCAGGTGGCAGCCCCCACCACTACTTTGGTAGCAGATAAGAAACCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595845.1
CDS-3UTR CAA 90 bp AGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCTTCATGAGGACTGGCTaGACTTTGTCTCCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: RQKSQGSCKRKGVGWPGGFMRTG*TLSPES
Trigger: GCTCTCTGGAGACAAAGTCAAGCCAGTCCTCATGAA...GCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp GCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAATTCATGAGGACTGGCTaGACTTTGTCTCCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: ALGASSPRLTAVCSSPEEFMRTG*TLSPES
Trigger: GCTCTCTGGAGACAAAGTCAAGCCAGTCCTCATGAA...TTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp CTGGGCGGTTTAGGCCGTGGAGGAGCAGGTTTCTTCGGAGGCAGAGCAGGAGTGTTCATGAGGACTGGCTaGACTTTGTCTCCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: LGGLGRGGAGFFGGRAGVFMRTG*TLSPES
Trigger: GCTCTCTGGAGACAAAGTCAAGCCAGTCCTCATGAA...CACTCCTGCTCTGCCTCCGAAGAAACCTGCTCCTCCACGGCCTAAACCGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CAA 90 bp GGGACGGCGCCAGGGAACACAGTCTTCTTTCTCTTGGAGGGTGGGATGAGGGACTCCAAGTGCCCATCCTaGTCAATGTCACTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: GTAPGNTVFFLLEGGMRDSKCPS*SMSLRS
Trigger: GGACCTCAGTGACATTGACAAGGATGGGCACTTGGA...GTCCCTCATCCCACCCTCCAAGAGAAAGAAGACTGTGTTCCCTGGCGCCGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000593760.5
CDS-3UTR CAA 90 bp GCCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTGTTGGCTGTGTTTGCTaGAGGCTGTGCTTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: ARGRLWKPPHYESTRKESVGCVC*RLCLGD
Trigger: GTCCCCCAAGCACAGCCTCAAGCAAACACAGCCAAC...ACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp GTGCATACACCACTGGGGGAGTGTCTGACTGATGCGTGGGAGGGCGGGTGGGGAAACGCGAATTGGTCTTaGCTTAACTTCCCCGTTTGC +
Preference number: 5 (lower is better)
Translates to: VHTPLGECLTDAWEGGWGNANWS*LNFPVC
Trigger: GCAAACGGGGAAGTTAAGCAAAGACCAATTCGCGTT...TCCCCACCCGCCCTCCCACGCATCAGTCAGACACTCCCCCAGTGGTGTATGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp CAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAAACGCGAATTGGTCTTaGCTTAACTTCCCCGTTTGC +
Preference number: 5 (lower is better)
Translates to: QPRVAGMDRGPRESLRNQNANWS*LNFPVC
Trigger: GCAAACGGGGAAGTTAAGCAAAGACCAATTCGCGTT...TTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp CGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGCAACGCGAATTGGTCTTaGCTTAACTTCCCCGTTTGC +
Preference number: 5 (lower is better)
Translates to: RVAGMDRGPRESLRNQAGNANWS*LNFPVC
Trigger: GCAAACGGGGAAGTTAAGCAAAGACCAATTCGCGTT...GCCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp GCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCCCGAGGCAGCTCCTGCAAACTGCTaGTTTCCCGGTCTAGGTCAT +
Preference number: 5 (lower is better)
Translates to: ARRRRTQLTEVKSAKPEAAPANC*FPGLGH
Trigger: ATGACCTAGACCGGGAAACAAGCAGTTTGCAGGAGC...TGCCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp GGATCATCCATGGCTCCAAAACTGCCCCTCTCTGCCAGGGAGACGCCTTCGCTCGCTCCTGCAAACTGCTaGTTTCCCGGTCTAGGTCAT +
Preference number: 5 (lower is better)
Translates to: GSSMAPKLPLSARETPSLAPANC*FPGLGH
Trigger: ATGACCTAGACCGGGAAACAAGCAGTTTGCAGGAGC...GAGCGAAGGCGTCTCCCTGGCAGAGAGGGGCAGTTTTGGAGCCATGGATGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CAA 90 bp GAGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGTTGCTCCTTGCCTGGTaGATTTCGTCTTGCGTTGAC +
Preference number: 5 (lower is better)
Translates to: ETKIPGKLQAEGSGVARRLLLAW*ISSCVD
Trigger: GTCAACGCAAGACGAAATCAACCAGGCAAGGAGCAA...CCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp CCCGTGCCCTGTCCCGCCTACACACGGCCCTCGCCTAGGCGGCAGGCATGTCAGAACAAGGCTTTATTTTaGAAAGGATCATCCATGGCT +
Preference number: 5 (lower is better)
Translates to: PVPCPAYTRPSPRRQACQNKALF*KGSSMA
Trigger: AGCCATGGATGATCCTTTCAAAAATAAAGCCTTGTT...CTGACATGCCTGCCGCCTAGGCGAGGGCCGTGTGTAGGCGGGACAGGGCACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602022.5
CDS-3UTR CAA 90 bp GCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTTAAATGGGTCAGATTaGAAGGGGTCTTCTGTCTGG +
Preference number: 5 (lower is better)
Translates to: APSGWNGSGASGKSAEPSLNGSD*KGSSVW
Trigger: CCAGACAGAAGACCCCTTCAAATCTGACCCATTTAA...GCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp ACACACCCTGCCTCGGTCAGAAGTGGGATCTGCTGCGCCGCCAGGGCACGCACATTAAATGGGTCAGATTaGAAGGGGTCTTCTGTCTGG +
Preference number: 5 (lower is better)
Translates to: THPASVRSGICCAARARTLNGSD*KGSSVW
Trigger: CCAGACAGAAGACCCCTTCAAATCTGACCCATTTAA...TGTGCGTGCCCTGGCGGCGCAGCAGATCCCACTTCTGACCGAGGCAGGGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CAA 90 bp AAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGAATGGATCTGTTGAAGTaGTCTGCTGTTCTGCAAAGG +
Preference number: 5 (lower is better)
Translates to: KSQGSCKRKGVGWPGGGGMDLLK*SAVLQR
Trigger: CCTTTGCAGAACAGCAGACAACTTCAACAGATCCAT...TCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp GCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCCTCCAAATGGATCTGTaGAAGTTGTCTGCTGTTCTG +
Preference number: 5 (lower is better)
Translates to: APSGWNGSGASGKSAEPSLQMDL*KLSAVL
Trigger: CAGAACAGCAGACAACTTCAACAGATCCATTTGGAG...GCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp AAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGAAATGGGTCACTTTCTTaGAAAGGGTCCCCTCCAAAT +
Preference number: 5 (lower is better)
Translates to: KSQGSCKRKGVGWPGGGGNGSLS*KGSPPN
Trigger: ATTTGGAGGGGACCCTTTCAAAGAAAGTGACCCATT...TCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp ACACGGGGCAGCCAAGGGAGACTGCCCAGTCACACTGGCACCTGGGGCACCTGGTTCTTTGTCTGTTTCTaGAAGAAGTCGTCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: TRGSQGRLPSHTGTWGTWFFVCF*KKSSVA
Trigger: TGCCACTGACGACTTCTTCAAGAAACAGACAAAGAA...CCAGGTGCCCCAGGTGCCAGTGTGACTGGGCAGTCTCCCTTGGCTGCCCCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CAA 90 bp GGCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCCCGAGGCAGGGATCTGATCCTTTaGAGGAGACACTGGAGGATG +
Preference number: 5 (lower is better)
Translates to: GPEAEDSTYRGEVCKARGRDLIL*RRHWRM
Trigger: CATCCTCCAGTGTCTCCTCAAAAGGATCAGATCCCT...GCCTCGGGCTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp GGGGTGGCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCCCAGGGATCTGATCCTTTaGAGGAGACACTGGAGGATG +
Preference number: 5 (lower is better)
Translates to: GVARRRRTQLTEVKSAKPRDLIL*RRHWRM
Trigger: CATCCTCCAGTGTCTCCTCAAAAGGATCAGATCCCT...GGGCTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp AAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGACTCAACTTACAAAGCCTTCAGCACTATaGAAGGACCCACTTCCGAAG +
Preference number: 5 (lower is better)
Translates to: KLQAEGSGVARRRRTQLTKPSAL*KDPLPK
Trigger: CTTCGGAAGTGGGTCCTTCAATAGTGCTGAAGGCTT...TGTAAGTTGAGTCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp CTTGAGGCTGTGCTTGGGGGACAGGCTCCCTGTGCTGTTGAGGCTGCTGACGCTAAGCCTTCAGCACTATaGAAGGACCCACTTCCGAAG +
Preference number: 5 (lower is better)
Translates to: LEAVLGGQAPCAVEAADAKPSAL*KDPLPK
Trigger: CTTCGGAAGTGGGTCCTTCAATAGTGCTGAAGGCTT...AGCGTCAGCAGCCTCAACAGCACAGGGAGCCTGTCCCCCAAGCACAGCCTCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CAA 90 bp CCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCACCCTGAACAACCAGAAGGTGGGGGCTaGGACATCTGGCTGAAGTCG +
Preference number: 5 (lower is better)
Translates to: PGDVTFPGLAAESAHPEQPEGGG*DIWLKS
Trigger: CGACTTCAGCCAGATGTCCAAGCCCCCACCTTCTGG...TTGTTCAGGGTGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455140.7
CDS-3UTR CAA 90 bp CCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGAGGTGTACTTTTACCTaGGACATCTGGCTGAAGTCG +
Preference number: 5 (lower is better)
Translates to: PEWLEWIGGLGKVCGTKLRCTFT*DIWLKS
Trigger: CGACTTCAGCCAGATGTCCAAGGTAAAAGTACACCT...CAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp GGCCATGAACAGATCTGGCGGGTGGGATGTTCTGCTGTCACACCAGGGGACCAGGGATCCAGGCCTATCTaGGACTTTGTTCTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: GHEQIWRVGCSAVTPGDQGSRPI*DFVLEA
Trigger: GGCTTCCAGAACAAAGTCCAAGATAGGCCTGGATCC...CTGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp GCCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGCCGGGTTGGTCTaGAACTCCTGGCCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: ARGRLWKPPHYESTRKESMAGLV*NSWPQV
Trigger: CACTTGAGGCCAGGAGTTCAAGACCAACCCGGCCAT...ACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602009.5
CDS-3UTR CAA 90 bp GTGTGGTGTTTAGAGAGCACGAGCGCTCACTCTTATTCCAGGGAGGAAGAGGAACCCTGGCCCCGGGTCTaGTCCTTCGTCCTAGCTGCT +
Preference number: 5 (lower is better)
Translates to: VWCLESTSAHSYSREEEEPWPRV*SFVLAA
Trigger: AGCAGCTAGGACGAAGGACAAGACCCGGGGCCAGGG...TTCCTCTTCCTCCCTGGAATAAGAGTGAGCGCTCGTGCTCTCTAAACACCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602009.5
CDS GCA 90 bp TTTGAAAGGATCATCCTTTACCATGGCTCCAAAACTGCCCCTCTCTaGCAGGGAGACGCCTTCGCTCAGGTTGGCCAGGTCGGTCAGGCT +
Preference number: 5 (lower is better)
Translates to: FERIILYHGSKTAPL*QGDAFAQVGQVGQA
Trigger: AGCCTGACCGACCTGGCCAACCTGAGCGAAGGCGTCTCCCTGGCAGAGAGGGGCAGTTTTGGAGCCATGGTAAAGGATGATCCTTTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594975.5
CDS-3UTR CAA 90 bp GCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCAAAATCCCATCAAATTaGGCCTTTTCTTCCACCCTC +
Preference number: 5 (lower is better)
Translates to: APSGWNGSGASGKSAEPSKIPSN*AFSSTL
Trigger: GAGGGTGGAAGAAAAGGCCAAATTTGATGGGATTTT...GCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp AACAGATCTGGCGGGTGGGATGTTCTGCTGTCACACCAGGGGACCAGAGCCCCAAGGACTGGCTTGACTTaGTCTCCAGAGAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: NRSGGWDVLLSHQGTRAPRTGLT*SPESKP
Trigger: TGGTTTGCTCTCTGGAGACAAAGTCAAGCCAGTCCT...TGGGGCTCTGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGCCAGATCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp AAGTGCATGGCCACAGCGAACTCATCTCGATCCAAGTGCCCATCCTTGTCAATGTGCTTGAGGCTGTGCTaGGGGGACAGGCTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: KCMATANSSRSKCPSLSMCLRLC*GDRLPV
Trigger: CACAGGGAGCCTGTCCCCCAAGCACAGCCTCAAGCA...CATTGACAAGGATGGGCACTTGGATCGAGATGAGTTCGCTGTGGCCATGCACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CAA 90 bp GTGTGGTGTTTAGAGAGCACGAGCGCTCACTCTTATTCCAGGGAGGAAGAGGAATGCTTGAGGCTGTGCTaGGGGGACAGGCTCCCTGTG +
Preference number: 5 (lower is better)
Translates to: VWCLESTSAHSYSREEEECLRLC*GDRLPV
Trigger: CACAGGGAGCCTGTCCCCCAAGCACAGCCTCAAGCA...TTCCTCTTCCTCCCTGGAATAAGAGTGAGCGCTCGTGCTCTCTAAACACCACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp AAGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCATCATCAAATCGCATCTaGTCTGCCACGGGCACCACC +
Preference number: 5 (lower is better)
Translates to: KGFPRRCDLSRSCSRVCSSSNRI*SATGTT
Trigger: GGTGGTGCCCGTGGCAGACAAGATGCGATTTGATGA...TGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp GGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAGAGCGGAACGCGAATTGGTCTTaGCTTAACTTCCCCGTTTGC +
Preference number: 5 (lower is better)
Translates to: GASSPRLTAVCSSPEEERNANWS*LNFPVC
Trigger: GCAAACGGGGAAGTTAAGCAAAGACCAATTCGCGTT...CCGCTCTTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp GTGAAGTCTGCAAAGCCCGAGGCAGAGGCCTTAGAAGGTTTAGCTGCAGAGGAGCGGTTCAGCTCCGACTaGGCTCGGTTCAGATCGTCT +
Preference number: 5 (lower is better)
Translates to: VKSAKPEAEALEGLAAEERFSSD*ARFRSS
Trigger: AGACGATCTGAACCGAGCCAAGTCGGAGCTGAACCG...CTCCTCTGCAGCTAAACCTTCTAAGGCCTCTGCCTCGGGCTTTGCAGACTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR CAA 90 bp TTTACCGCTGGGCGGTTTAGGCCGTGGAGGAGCAGGTTTCTTCGGAGGCAGAGCGTTGACTTCAGGGACTaGATGATGGTTTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: FTAGRFRPWRSRFLRRQSVDFRD*MMVSSW
Trigger: CCAGCTGGAAACCATCATCAAGTCCCTGAAGTCAAC...GCTCTGCCTCCGAAGAAACCTGCTCCTCCACGGCCTAAACCGCCCAGCGGTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CAA 90 bp ATACTTCCGCAGAGATGGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCACGCCTTCGCTCAGGTaGGCCAGGTCGGTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: ILPQRWRAFKTGSERIQATPSLR*ARSVRL
Trigger: CAGCCTGACCGACCTGGCCAACCTGAGCGAAGGCGT...GGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCCATCTCTGCGGAAGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp CAGGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTCCTATGGATCTGTTGAAGTaGTCTGCTGTTCTGCAAAGG +
Preference number: 5 (lower is better)
Translates to: QVLQPSLLTLNKPPSPGPMDLLK*SAVLQR
Trigger: CCTTTGCAGAACAGCAGACAACTTCAACAGATCCAT...AGGACCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp AGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGATGGATCTGTTGAAGTaGTCTGCTGTTCTGCAAAGG +
Preference number: 5 (lower is better)
Translates to: SPEWLEWIGGLGKVCGTKMDLLK*SAVLQR
Trigger: CCTTTGCAGAACAGCAGACAACTTCAACAGATCCAT...CTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp CCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGATGGATCTGTTGAAGTaGTCTGCTGTTCTGCAAAGG +
Preference number: 5 (lower is better)
Translates to: PSGWNGSGASGKSAEPSWMDLLK*SAVLQR
Trigger: CCTTTGCAGAACAGCAGACAACTTCAACAGATCCAT...CCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp TGTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCTCCAAATGGATCTGTaGAAGTTGTCTGCTGTTCTG +
Preference number: 5 (lower is better)
Translates to: CQPRVAGMDRGPRESLRNLQMDL*KLSAVL
Trigger: CAGAACAGCAGACAACTTCAACAGATCCATTTGGAG...GTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp CCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGAATGGGTCACTTTCTTaGAAAGGGTCCCCTCCAAAT +
Preference number: 5 (lower is better)
Translates to: PSGWNGSGASGKSAEPSWNGSLS*KGSPPN
Trigger: ATTTGGAGGGGACCCTTTCAAAGAAAGTGACCCATT...CCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp GAGGCTGTGCTTGGGGGACAGGCTCCCTGTGCTGTTGAGGCTGCTGACGCTGCCTTCTTTGTCTGTTTCTaGAAGAAGTCGTCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: EAVLGGQAPCAVEAADAAFFVCF*KKSSVA
Trigger: TGCCACTGACGACTTCTTCAAGAAACAGACAAAGAA...GGCAGCGTCAGCAGCCTCAACAGCACAGGGAGCCTGTCCCCCAAGCACAGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CAA 90 bp GTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCTTCTTTGTCTGTTTCTaGAAGAAGTCGTCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: VSPEWLEWIGGLGKVCGTFFVCF*KKSSVA
Trigger: TGCCACTGACGACTTCTTCAAGAAACAGACAAAGAA...GGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp CGGGGAAGCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCTTCTTTGTCTGTTTCTaGAAGAAGTCGTCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: RGSPGCFLSSTDRCVFVPFFVCF*KKSSVA
Trigger: TGCCACTGACGACTTCTTCAAGAAACAGACAAAGAA...GGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGCTTCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp TTGTGGCTACTGCCTCTTCCCGCAGCGTGGATAATGCCTGGGCCTCTGCAGGTGAGGGATCTGATCCTTTaGAGGAGACACTGGAGGATG +
Preference number: 5 (lower is better)
Translates to: LWLLPLPAAWIMPGPLQVRDLIL*RRHWRM
Trigger: CATCCTCCAGTGTCTCCTCAAAAGGATCAGATCCCT...CACCTGCAGAGGCCCAGGCATTATCCACGCTGCGGGAAGAGGCAGTAGCCACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CAA 90 bp TTGTGGCTACTGCCTCTTCCCGCAGCGTGGATAATGCCTGGGCCTCTGCAGGTGAAGCCTTCAGCACTATaGAAGGACCCACTTCCGAAG +
Preference number: 5 (lower is better)
Translates to: LWLLPLPAAWIMPGPLQVKPSAL*KDPLPK
Trigger: CTTCGGAAGTGGGTCCTTCAATAGTGCTGAAGGCTT...CACCTGCAGAGGCCCAGGCATTATCCACGCTGCGGGAAGAGGCAGTAGCCACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CAA 90 bp TTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATGGGTCTTTTCCACTAAACGGGTTCTCGCTCTCCCGCTaGGCCCACGCCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LEGLAAEEGTNGSFPLNGFSLSR*AHASCC
Trigger: GCAGCAGCTGGCGTGGGCCAAGCGGGAGAGCGAGAA...CCCGTTTAGTGGAAAAGACCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602022.5
CDS-3UTR CAA 90 bp CAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAAAAATCCCATCAAATTaGGCCTTTTCTTCCACCCTC +
Preference number: 5 (lower is better)
Translates to: QKSQGSCKRKGVGWPGGGKIPSN*AFSSTL
Trigger: GAGGGTGGAAGAAAAGGCCAAATTTGATGGGATTTT...TCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp AGGCGGGGAAGCCCTGGGTGCTTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCAAAATCCCATCAAATTaGGCCTTTTCTTCCACCCTC +
Preference number: 5 (lower is better)
Translates to: RRGSPGCFLSSTDRCVFVKIPSN*AFSSTL
Trigger: GAGGGTGGAAGAAAAGGCCAAATTTGATGGGATTTT...GACGAACACACAGCGGTCAGTCGAGGAGAGGAAGCACCCAGGGCTTCCCCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp AAGCCCGAGGCAGAGGCCTTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATGGGACAGTCTTCTTTCTCTaGGAGGGTGGGATGAGGGAC +
Preference number: 5 (lower is better)
Translates to: KPEAEALEGLAAEEGTNGTVFFL*EGGMRD
Trigger: GTCCCTCATCCCACCCTCCAAGAGAAAGAAGACTGT...CCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAAGGCCTCTGCCTCGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR CAA 90 bp AAGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCAACAGTCTTCTTTCTCTaGGAGGGTGGGATGAGGGAC +
Preference number: 5 (lower is better)
Translates to: KGFPRRCDLSRSCSRVCSTVFFL*EGGMRD
Trigger: GTCCCTCATCCCACCCTCCAAGAGAAAGAAGACTGT...TGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp CTGGAACCAACGTTGGCCATGAACAGATCTGGCGGGTGGGATGTTCTGCTGTCATCATCAAATCGCATCTaGTCTGCCACGGGCACCACC +
Preference number: 5 (lower is better)
Translates to: LEPTLAMNRSGGWDVLLSSSNRI*SATGTT
Trigger: GGTGGTGCCCGTGGCAGACAAGATGCGATTTGATGA...TGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCCAACGTTGGTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp CTGTCTTTGGAGTTGGGGGAATCACTGGCCACTTGCAAACTGCCACTTCACTGCCTCGTCCAGGCGGTCTaGAGCATCCTGTTTCTGAGC +
Preference number: 5 (lower is better)
Translates to: LSLELGESLATCKLPLHCLVQAV*SILFLS
Trigger: GCTCAGAAACAGGATGCTCAAGACCGCCTGGACGAG...GCAGTGAAGTGGCAGTTTGCAAGTGGCCAGTGATTCCCCCAACTCCAAAGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp GGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGAGCATGTCTCGGAGCTaGGCCTTCTGCTGGTCCATC +
Preference number: 5 (lower is better)
Translates to: GGGYGNHLITSPREKRVWSMSRS*AFCWSI
Trigger: GATGGACCAGCAGAAGGCCAAGCTCCGAGACATGCT...CCATACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp AGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCACTTGCTCCTTGCCTGGTaGATTTCGTCTTGCGTTGAC +
Preference number: 5 (lower is better)
Translates to: RASPGDVTFPGLAAESAHLLLAW*ISSCVD
Trigger: GTCAACGCAAGACGAAATCAACCAGGCAAGGAGCAA...GTGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp CAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAATGCAACTCTTGCGTGTaGTTGCTAAATAACAAGGCT +
Preference number: 5 (lower is better)
Translates to: QPRVAGMDRGPRESLRNQCNSCV*LLNNKA
Trigger: AGCCTTGTTATTTAGCAACAACACGCAAGAGTTGCA...TTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp TTTCCAGGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAGCCCCCGAGTCCCGGTTAAATGGGTCAGATTaGAAGGGGTCTTCTGTCTGG +
Preference number: 5 (lower is better)
Translates to: FPGLAAESAHPEQAPESRLNGSD*KGSSVW
Trigger: CCAGACAGAAGACCCCTTCAAATCTGACCCATTTAA...CCGGGACTCGGGGGCTTGTTCAGGGTGAGCAGACTCGGCTGCAAGACCTGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp GAGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGATGGATCTGTTGAAGTaGTCTGCTGTTCTGCAAAGG +
Preference number: 5 (lower is better)
Translates to: ETKIPGKLQAEGSGVARRMDLLK*SAVLQR
Trigger: CCTTTGCAGAACAGCAGACAACTTCAACAGATCCAT...CCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp AGACAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCAATGGGTCACTTTCTTaGAAAGGGTCCCCTCCAAAT +
Preference number: 5 (lower is better)
Translates to: RQKSQGSCKRKGVGWPGGNGSLS*KGSPPN
Trigger: ATTTGGAGGGGACCCTTTCAAAGAAAGTGACCCATT...GCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp TTCCTCTCCTCGACTGACCGCTGTGTGTTCGTCCCCAGAGGAAGAGCGGGAGGCAATGGGTCACTTTCTTaGAAAGGGTCCCCTCCAAAT +
Preference number: 5 (lower is better)
Translates to: FLSSTDRCVFVPRGRAGGNGSLS*KGSPPN
Trigger: ATTTGGAGGGGACCCTTTCAAAGAAAGTGACCCATT...GCCTCCCGCTCTTCCTCTGGGGACGAACACACAGCGGTCAGTCGAGGAGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp CAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGATTCTTTGTCTGTTTCTaGAAGAAGTCGTCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: QKSQGSCKRKGVGWPGGGFFVCF*KKSSVA
Trigger: TGCCACTGACGACTTCTTCAAGAAACAGACAAAGAA...TCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp CAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAAAGAAGCTGGGAGGTTaGCCTTTAAAAGGAGACAAA +
Preference number: 5 (lower is better)
Translates to: QKSQGSCKRKGVGWPGGGKKLGG*PLKGDK
Trigger: TTTGTCTCCTTTTAAAGGCAAACCTCCCAGCTTCTT...TCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp GGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGACTCAACTTAAAGAAGCTGGGAGGTTaGCCTTTAAAAGGAGACAAA +
Preference number: 5 (lower is better)
Translates to: GSCKRKGVGWPGGGGLNLKKLGG*PLKGDK
Trigger: TTTGTCTCCTTTTAAAGGCAAACCTCCCAGCTTCTT...TAAGTTGAGTCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp GAGGCTGTGCTTGGGGGACAGGCTCCCTGTGCTGTTGAGGCTGCTGACGCTGCCAAAATCCCATCAAATTaGGCCTTTTCTTCCCAAGGA +
Preference number: 5 (lower is better)
Translates to: EAVLGGQAPCAVEAADAAKIPSN*AFSSQG
Trigger: TCCTTGGGAAGAAAAGGCCAAATTTGATGGGATTTT...GGCAGCGTCAGCAGCCTCAACAGCACAGGGAGCCTGTCCCCCAAGCACAGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593760.5
CDS-3UTR CAA 90 bp CGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCAGGGGCAGACTCTGGTGGATCCAGGCCTATCTaGGACTTTGTTCTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: RNGKLHVPRFEAAGADSGGSRPI*DFVLEA
Trigger: GGCTTCCAGAACAAAGTCCAAGATAGGCCTGGATCC...ACCAGAGTCTGCCCCTGCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp CGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCAGGGGCAGACTCTGGTAGAAGCCCTCTGAACTaGGGTGGTTGGCCCAATGTA +
Preference number: 5 (lower is better)
Translates to: RNGKLHVPRFEAAGADSGRSPLN*GGWPNV
Trigger: TACATTGGGCCAACCACCCAAGTTCAGAGGGCTTCT...ACCAGAGTCTGCCCCTGCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp TGTCCTGGCCCGGCACCGCCAATAGGAAGTGAGACCGGCTCTGAAATCACAGCTGCTTTCCTTCATTCCTaGGACATCTGGCTGAAGTCG +
Preference number: 5 (lower is better)
Translates to: CPGPAPPIGSETGSEITAAFLHS*DIWLKS
Trigger: CGACTTCAGCCAGATGTCCAAGGAATGAAGGAAAGC...AGCTGTGATTTCAGAGCCGGTCTCACTTCCTATTGGCGGTGCCGGGCCAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CAA 90 bp TTCTCGGAATCTGTGTTCTGTGATCACAAGTTGCGACCGCTGCCAACCCCAAGAGGGGCTGTGTTCTGCTaGTGGCTACTGCCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: FSESVFCDHKLRPLPTPRGAVFC*WLLPLP
Trigger: GGGAAGAGGCAGTAGCCACAAGCAGAACACAGCCCC...TCTTGGGGTTGGCAGCGGTCGCAACTTGTGATCACAGAACACAGATTCCGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS GCA 90 bp AAAGTACTCGGGTTTCTTATCTGCTACCAAAGTAGTGGTGGGGGCTaGCACCTGGGCATTTGGATCCACCAGCTGCAGCCTGAGAGGTCT +
Preference number: 5 (lower is better)
Translates to: KVLGFLICYQSSGGG*HLGIWIHQLQPERS
Trigger: AGACCTCTCAGGCTGCAGCTGGTGGATCCAAATGCCCAGGTGGCAGCCCCCACCACTACTTTGGTAGCAGATAAGAAACCCGAGTACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595845.1
CDS-3UTR CAA 90 bp GGGGTGGCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCCCAAAATCCCATCAAATTaGGCCTTTTCTTCCACCCTC +
Preference number: 5 (lower is better)
Translates to: GVARRRRTQLTEVKSAKPKIPSN*AFSSTL
Trigger: GAGGGTGGAAGAAAAGGCCAAATTTGATGGGATTTT...GGGCTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGCCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp TTTTTACTTTGGAACGGGTCGCCGCTGTCAGCCCCGAGTGGCTGGAATGGATCGAGGACTGGCTTGACTTaGTCTCCAGAGAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: FLLWNGSPLSAPSGWNGSRTGLT*SPESKP
Trigger: TGGTTTGCTCTCTGGAGACAAAGTCAAGCCAGTCCT...CGATCCATTCCAGCCACTCGGGGCTGACAGCGGCGACCCGTTCCAAAGTAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR CAA 90 bp CTGGAACCAACGTTGGCCATGAACAGATCTGGCGGGTGGGATGTTCTGCTGTCAACAGTCTTCTTTCTCTaGGAGGGTGGGATGAGGGAC +
Preference number: 5 (lower is better)
Translates to: LEPTLAMNRSGGWDVLLSTVFFL*EGGMRD
Trigger: GTCCCTCATCCCACCCTCCAAGAGAAAGAAGACTGT...TGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCCAACGTTGGTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp GTGTGGTGTTTAGAGAGCACGAGCGCTCACTCTTATTCCAGGGAGGAAGAGGAAGTTGGCTGTGTTTGCTaGAGGCTGTGCTTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: VWCLESTSAHSYSREEEEVGCVC*RLCLGD
Trigger: GTCCCCCAAGCACAGCCTCAAGCAAACACAGCCAAC...TTCCTCTTCCTCCCTGGAATAAGAGTGAGCGCTCGTGCTCTCTAAACACCACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp GGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGCACTGTTGGCTGTGTTaGCTTGAGGCTGTGCTTGGG +
Preference number: 5 (lower is better)
Translates to: GGGYGNHLITSPREKRVWHCWLC*LEAVLG
Trigger: CCCAAGCACAGCCTCAAGCAAACACAGCCAACAGTG...CCATACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp GGGGGAATCACTGGCCACTTGCAAACTGCCACTTCACTGCCAACTTTTATCCAAGTCCGGCGAGAGGACTaGAGGAGGGTCGATGCCTTT +
Preference number: 5 (lower is better)
Translates to: GGITGHLQTATSLPTFIQVRRED*RRVDAF
Trigger: AAAGGCATCGACCCTCCTCAAGTCCTCTCGCCGGAC...TTGGATAAAAGTTGGCAGTGAAGTGGCAGTTTGCAAGTGGCCAGTGATTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp CGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCAGGGGCAGACTCTGGTTTGCTCCTTGCCTGGTaGATTTCGTCTTGCGTTGAC +
Preference number: 5 (lower is better)
Translates to: RNGKLHVPRFEAAGADSGLLLAW*ISSCVD
Trigger: GTCAACGCAAGACGAAATCAACCAGGCAAGGAGCAA...ACCAGAGTCTGCCCCTGCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp GTCAGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAACTCTTGCGTGTTGTaGCTAAATAACAAGGCTTTA +
Preference number: 5 (lower is better)
Translates to: VSPEWLEWIGGLGKVCGTNSCVL*LNNKAL
Trigger: TAAAGCCTTGTTATTTAGCAACAACACGCAAGAGTT...GGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp GGACGTCGCTCAGCATGTCTCGGAGCTTGGCCTTCTGCTGGTCCATCTCGTCCACTCCAAATGGATCTGTaGAAGTTGTCTGCTGTTCTG +
Preference number: 5 (lower is better)
Translates to: GRRSACLGAWPSAGPSRPLQMDL*KLSAVL
Trigger: CAGAACAGCAGACAACTTCAACAGATCCATTTGGAG...TGGACGAGATGGACCAGCAGAAGGCCAAGCTCCGAGACATGCTGAGCGACGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CAA 90 bp TTGTGGCTACTGCCTCTTCCCGCAGCGTGGATAATGCCTGGGCCTCTGCAGGTGAATGGGTCACTTTCTTaGAAAGGGTCCCCTCCAAAT +
Preference number: 5 (lower is better)
Translates to: LWLLPLPAAWIMPGPLQVNGSLS*KGSPPN
Trigger: ATTTGGAGGGGACCCTTTCAAAGAAAGTGACCCATT...CACCTGCAGAGGCCCAGGCATTATCCACGCTGCGGGAAGAGGCAGTAGCCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CAA 90 bp GGGGTGGCCCGGAGGCGGAGGACTCAACTTACAGAGGTGAAGTCTGCAAAGCCCTTCTTTGTCTGTTTCTaGAAGAAGTCGTCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: GVARRRRTQLTEVKSAKPFFVCF*KKSSVA
Trigger: TGCCACTGACGACTTCTTCAAGAAACAGACAAAGAA...GGGCTTTGCAGACTTCACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGCCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp TTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCTGGGGCGCTGCTTGCTGGCTGGAACCAACGTaGGCCATGAACAGATCTGGC +
Preference number: 5 (lower is better)
Translates to: FRRGQFLLERATPWGAACWLEPT*AMNRSG
Trigger: GCCAGATCTGTTCATGGCCAACGTTGGTTCCAGCCA...GCAAGCAGCGCCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp GGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCTGGGGCGCTGCTTGCCATTGGTGGGGCAGTGTCTTaGCAGGGAGACAAAGATCAG +
Preference number: 5 (lower is better)
Translates to: GEANSYLKEQHPGALLAIGGAVS*QGDKDQ
Trigger: CTGATCTTTGTCTCCCTGCAAAGACACTGCCCCACC...AATGGCAAGCAGCGCCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602009.5
CDS TCA 90 bp CTTCCCGTGTTAAGTTTGACAGCCGTGCTCATGCCTAGTAATACTTaGCAGTGGAGGAATGTGGAAGGAGCCGTGGAGGTCACCCAGCCT +
Preference number: 5 (lower is better)
Translates to: LPVLSLTAVLMPSNT*QWRNVEGAVEVTQP
Trigger: AGGCTGGGTGACCTCCACGGCTCCTTCCACATTCCTCCACTGTCAAGTATTACTAGGCATGAGCACGGCTGTCAAACTTAACACGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602151.1
CDS-3UTR CAA 90 bp AGGTCCCAGACCCTGCCCAGGACATCAAGAGGCAGCTTTGAGTTCATGAGGACTTTCATGAGGACTGGCTaGACTTTGTCTCCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: RSQTLPRTSRGSFEFMRTFMRTG*TLSPES
Trigger: GCTCTCTGGAGACAAAGTCAAGCCAGTCCTCATGAA...AGTCCTCATGAACTCAAAGCTGCCTCTTGATGTCCTGGGCAGGGTCTGGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000596037.5
CDS-3UTR CAA 90 bp CCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATTCATGAGGACTGGCTaGACTTTGTCTCCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: PGGGYGNHLITSPREKRVFMRTG*TLSPES
Trigger: GCTCTCTGGAGACAAAGTCAAGCCAGTCCTCATGAA...TACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp GTGAAGTCTGCAAAGCCCGAGGCAGAGGCCTTAGAAGGTTTAGCTGCAGAGGAGTTCATGAGGACTGGCTaGACTTTGTCTCCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: VKSAKPEAEALEGLAAEEFMRTG*TLSPES
Trigger: GCTCTCTGGAGACAAAGTCAAGCCAGTCCTCATGAA...CTCCTCTGCAGCTAAACCTTCTAAGGCCTCTGCCTCGGGCTTTGCAGACTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR CAA 90 bp GGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGTCCAAGTGCCCATCCTaGTCAATGTCACTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: GGGYGNHLITSPREKRVWSKCPS*SMSLRS
Trigger: GGACCTCAGTGACATTGACAAGGATGGGCACTTGGA...CCATACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp AGAGGTGAAGTCTGCAAAGCCCGAGGCAGAGGCCTTAGAAGGTTTAGCTGCAGATCCAAGTGCCCATCCTaGTCAATGTCACTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: RGEVCKARGRGLRRFSCRSKCPS*SMSLRS
Trigger: GGACCTCAGTGACATTGACAAGGATGGGCACTTGGA...TCTGCAGCTAAACCTTCTAAGGCCTCTGCCTCGGGCTTTGCAGACTTCACCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR CAA 90 bp GGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGGAGTCATCAAATCGCATCTaGTCTGCCACGGGCACCACC +
Preference number: 5 (lower is better)
Translates to: GGYGNHLITSPREKRVWESSNRI*SATGTT
Trigger: GGTGGTGCCCGTGGCAGACAAGATGCGATTTGATGA...CTCCCATACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp CAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTACCAGTCCGGCGAGAGGACTaGAGGAGGGTCGATGCCTTT +
Preference number: 5 (lower is better)
Translates to: QKWQCRINNARDRECEVPVRRED*RRVDAF
Trigger: AAAGGCATCGACCCTCCTCAAGTCCTCTCGCCGGAC...TGGTACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp AGGAGCAGGTTTCTTCGGAGGCAGAGCAGGAGTGTCCTGTTTACTTTTAAAGGGCTCGTCCAGGCGGTCTaGAGCATCCTGTTTCTGAGC +
Preference number: 5 (lower is better)
Translates to: RSRFLRRQSRSVLFTFKGLVQAV*SILFLS
Trigger: GCTCAGAAACAGGATGCTCAAGACCGCCTGGACGAG...CCCTTTAAAAGTAAACAGGACACTCCTGCTCTGCCTCCGAAGAAACCTGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CAA 90 bp GTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATAGACATCTGCACTAGCATGTCTCGGAGCTaGGCCTTCTGCTGGTCCATC +
Preference number: 5 (lower is better)
Translates to: VLGVRWRRCVCVYIDICTSMSRS*AFCWSI
Trigger: GATGGACCAGCAGAAGGCCAAGCTCCGAGACATGCT...AGTGCAGATGTCTATATATACACACACACACCGTCGCCACCGTACTCCAAGGAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp ATACTTCCGCAGAGATGGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCAGCATGTCTCGGAGCTaGGCCTTCTGCTGGTCCATC +
Preference number: 5 (lower is better)
Translates to: ILPQRWRAFKTGSERIQASMSRS*AFCWSI
Trigger: GATGGACCAGCAGAAGGCCAAGCTCCGAGACATGCT...GGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCCATCTCTGCGGAAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp CATTTTATACAACGAGTGCATACACCACTGGGGGAGTGTCTGACTGATGCGTGGCGGTTCAGCTCCGACTaGGCTCGGTTCAGATCGTCT +
Preference number: 5 (lower is better)
Translates to: HFIQRVHTPLGECLTDAWRFSSD*ARFRSS
Trigger: AGACGATCTGAACCGAGCCAAGTCGGAGCTGAACCG...CCACGCATCAGTCAGACACTCCCCCAGTGGTGTATGCACTCGTTGTATAAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp TTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTAACGCCTTCGCTCAGGTaGGCCAGGTCGGTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: LQKWQCRINNARDRECEVTPSLR*ARSVRL
Trigger: CAGCCTGACCGACCTGGCCAACCTGAGCGAAGGCGT...TACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp GCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAGGACTCAACTTACAGAGGTAACAAGGCTTTATTTTaGAAAGGATCATCCATGGCT +
Preference number: 5 (lower is better)
Translates to: ASGREWGGPEAEDSTYRGNKALF*KGSSMA
Trigger: AGCCATGGATGATCCTTTCAAAAATAAAGCCTTGTT...ACCTCTGTAAGTTGAGTCCTCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp CAAAAATCCCAGGGAAGCTGCAAGCGGAAGGGAGTGGGGTGGCCCGGAGGCGGAAACAAGGCTTTATTTTaGAAAGGATCATCCATGGCT +
Preference number: 5 (lower is better)
Translates to: QKSQGSCKRKGVGWPGGGNKALF*KGSSMA
Trigger: AGCCATGGATGATCCTTTCAAAAATAAAGCCTTGTT...TCCGCCTCCGGGCCACCCCACTCCCTTCCGCTTGCAGCTTCCCTGGGATTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp AGCCCCGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGAACTCTTGCGTGTTGTaGCTAAATAACAAGGCTTTA +
Preference number: 5 (lower is better)
Translates to: SPEWLEWIGGLGKVCGTKNSCVL*LNNKAL
Trigger: TAAAGCCTTGTTATTTAGCAACAACACGCAAGAGTT...CTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp CGAGTGGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTGGCAACTCTTGCGTGTTGTaGCTAAATAACAAGGCTTTA +
Preference number: 5 (lower is better)
Translates to: RVAGMDRGPRESLRNQAGNSCVL*LNNKAL
Trigger: TAAAGCCTTGTTATTTAGCAACAACACGCAAGAGTT...GCCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000602022.5
CDS-3UTR CAA 90 bp GGCCTCTGTAAGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGATTAAATGGGTCAGATTaGAAGGGGTCTTCTGTCTGG +
Preference number: 5 (lower is better)
Translates to: GLCKGFPRRCDLSRSCSRLNGSD*KGSSVW
Trigger: CCAGACAGAAGACCCCTTCAAATCTGACCCATTTAA...TCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCTTACAGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp TGTCCTGGCCCGGCACCGCCAATAGGAAGTGAGACCGGCTCTGAAATCACAGCTCTCCAAATGGATCTGTaGAAGTTGTCTGCTGTTCTG +
Preference number: 5 (lower is better)
Translates to: CPGPAPPIGSETGSEITALQMDL*KLSAVL
Trigger: CAGAACAGCAGACAACTTCAACAGATCCATTTGGAG...AGCTGTGATTTCAGAGCCGGTCTCACTTCCTATTGGCGGTGCCGGGCCAGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CAA 90 bp GTGAAGTCTGCAAAGCCCGAGGCAGAGGCCTTAGAAGGTTTAGCTGCAGAGGAGAAGCCTTCAGCACTATaGAAGGACCCACTTCCGAAG +
Preference number: 5 (lower is better)
Translates to: VKSAKPEAEALEGLAAEEKPSAL*KDPLPK
Trigger: CTTCGGAAGTGGGTCCTTCAATAGTGCTGAAGGCTT...CTCCTCTGCAGCTAAACCTTCTAAGGCCTCTGCCTCGGGCTTTGCAGACTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR CAA 90 bp CTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATAGACATCTGCACTGCCTCCTCATTGCCAAATTaGGAACGGGTCGCCGCTGTC +
Preference number: 5 (lower is better)
Translates to: LGVRWRRCVCVYIDICTASSLPN*ERVAAV
Trigger: GACAGCGGCGACCCGTTCCAAATTTGGCAATGAGGA...GGCAGTGCAGATGTCTATATATACACACACACACCGTCGCCACCGTACTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594851.5
CDS GCA 90 bp ATGGTGGGGCAGTGTCTTTGCAGGGAGACAAAGATCAGTCTCACCTaGCTCCAAGGAGCCCACTTGTACCAGAAAGACAAAAGTGTGAGC +
Preference number: 5 (lower is better)
Translates to: MVGQCLCRETKISLT*LQGAHLYQKDKSVS
Trigger: GCTCACACTTTTGTCTTTCTGGTACAAGTGGGCTCCTTGGAGGCAGGTGAGACTGATCTTTGTCTCCCTGCAAAGACACTGCCCCACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602009.5
CDS-3UTR CAA 90 bp TGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATAGACATCTGCACTGCCCCAGGACTGGCTTGACTTaGTCTCCAGAGAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: WSTVATVCVCIYRHLHCPRTGLT*SPESKP
Trigger: TGGTTTGCTCTCTGGAGACAAAGTCAAGCCAGTCCT...GGGGCAGTGCAGATGTCTATATATACACACACACACCGTCGCCACCGTACTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp AGAGGTGAAGTCTGCAAAGCCCGAGGCAGAGGCCTTAGAAGGTTTAGCTGCAGATTCATGAGGACTGGCTaGACTTTGTCTCCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: RGEVCKARGRGLRRFSCRFMRTG*TLSPES
Trigger: GCTCTCTGGAGACAAAGTCAAGCCAGTCCTCATGAA...TCTGCAGCTAAACCTTCTAAGGCCTCTGCCTCGGGCTTTGCAGACTTCACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR CAA 90 bp GGTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATAGACATCTGCACTCCAAGTGCCCATCCTaGTCAATGTCACTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: GPWSTVATVCVCIYRHLHSKCPS*SMSLRS
Trigger: GGACCTCAGTGACATTGACAAGGATGGGCACTTGGA...GTGCAGATGTCTATATATACACACACACACCGTCGCCACCGTACTCCAAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp CACAGCGAACTCATCTCGATCCAAGTGCCCATCCTTGTCAATGTCACTGAGGTCACAGTCTTCTTTCTCTaGGAGGGTGGGATGAGGGAC +
Preference number: 5 (lower is better)
Translates to: HSELISIQVPILVNVTEVTVFFL*EGGMRD
Trigger: GTCCCTCATCCCACCCTCCAAGAGAAAGAAGACTGT...GACCTCAGTGACATTGACAAGGATGGGCACTTGGATCGAGATGAGTTCGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000593760.5
CDS-3UTR CAA 90 bp CTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGAGGCTCCCTGTGCTGTaGAGGCTGCTGACGCTGCCG +
Preference number: 5 (lower is better)
Translates to: LFFLQKWQCRINNARDRERLPVL*RLLTLP
Trigger: CGGCAGCGTCAGCAGCCTCAACAGCACAGGGAGCCT...CTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp CAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTACCAGTTGGCTGTGTTTGCTaGAGGCTGTGCTTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: QKWQCRINNARDRECEVPVGCVC*RLCLGD
Trigger: GTCCCCCAAGCACAGCCTCAAGCAAACACAGCCAAC...TGGTACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp AGGAGCAGGTTTCTTCGGAGGCAGAGCAGGAGTGTCCTGTTTACTTTTAAAGGGTCATCAAATCGCATCTaGTCTGCCACGGGCACCACC +
Preference number: 5 (lower is better)
Translates to: RSRFLRRQSRSVLFTFKGSSNRI*SATGTT
Trigger: GGTGGTGCCCGTGGCAGACAAGATGCGATTTGATGA...CCCTTTAAAAGTAAACAGGACACTCCTGCTCTGCCTCCGAAGAAACCTGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CAA 90 bp GTGTGGTGTTTAGAGAGCACGAGCGCTCACTCTTATTCCAGGGAGGAAGAGGAAGCTCCTGCAAACTGCTaGTTTCCCGGTCTAGGTCAT +
Preference number: 5 (lower is better)
Translates to: VWCLESTSAHSYSREEEEAPANC*FPGLGH
Trigger: ATGACCTAGACCGGGAAACAAGCAGTTTGCAGGAGC...TTCCTCTTCCTCCCTGGAATAAGAGTGAGCGCTCGTGCTCTCTAAACACCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp TTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCTGGGGCGCTGCTTGCGTTGACTTCAGGGACTaGATGATGGTTTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: FRRGQFLLERATPWGAACVDFRD*MMVSSW
Trigger: CCAGCTGGAAACCATCATCAAGTCCCTGAAGTCAAC...GCAAGCAGCGCCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp AGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCACTGCAACTCTTGCGTGTaGTTGCTAAATAACAAGGCT +
Preference number: 5 (lower is better)
Translates to: RASPGDVTFPGLAAESAHCNSCV*LLNNKA
Trigger: AGCCTTGTTATTTAGCAACAACACGCAAGAGTTGCA...GTGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp CCCCCGAGTCCCGGTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATTGCAACTCTTGCGTGTaGTTGCTAAATAACAAGGCT +
Preference number: 5 (lower is better)
Translates to: PPSPGPWSTVATVCVCIYCNSCV*LLNNKA
Trigger: AGCCTTGTTATTTAGCAACAACACGCAAGAGTTGCA...ATATATACACACACACACCGTCGCCACCGTACTCCAAGGACCGGGACTCGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp ACCCAGTTCACTGTTGGCTGTGTTTGCTTGAGGCTGTGCTTGGGGGACAGGCTCTTAAATGGGTCAGATTaGAAGGGGTCTTCTGTCTGG +
Preference number: 5 (lower is better)
Translates to: TQFTVGCVCLRLCLGDRLLNGSD*KGSSVW
Trigger: CCAGACAGAAGACCCCTTCAAATCTGACCCATTTAA...GAGCCTGTCCCCCAAGCACAGCCTCAAGCAAACACAGCCAACAGTGAACTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CAA 90 bp CATTTTATACAACGAGTGCATACACCACTGGGGGAGTGTCTGACTGATGCGTGGTGGAACGGGTCGCCTTaGAAGGGGTCAGCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: HFIQRVHTPLGECLTDAWWNGSP*KGSAPL
Trigger: TAAAGGAGCTGACCCCTTCAAAGGCGACCCGTTCCA...CCACGCATCAGTCAGACACTCCCCCAGTGGTGTATGCACTCGTTGTATAAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp TCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCACCCTGAACTCCAAATGGATCTGTaGAAGTTGTCTGCTGTTCTG +
Preference number: 5 (lower is better)
Translates to: SPGDVTFPGLAAESAHPELQMDL*KLSAVL
Trigger: CAGAACAGCAGACAACTTCAACAGATCCATTTGGAG...TTCAGGGTGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp GGGGGAATCACTGGCCACTTGCAAACTGCCACTTCACTGCCAACTTTTATCCAATGGCTGGAACCAACGTaGGCCATGAACAGATCTGGC +
Preference number: 5 (lower is better)
Translates to: GGITGHLQTATSLPTFIQWLEPT*AMNRSG
Trigger: GCCAGATCTGTTCATGGCCAACGTTGGTTCCAGCCA...TTGGATAAAAGTTGGCAGTGAAGTGGCAGTTTGCAAGTGGCCAGTGATTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp CGAAATGGGAAACTACATGTCCCCAGGTTCGAGGCTGCAGGGGCAGACTCTGGTTCTGAACTTGGGTGGTaGGCCCAATGTAAATACTTC +
Preference number: 5 (lower is better)
Translates to: RNGKLHVPRFEAAGADSGSELGW*AQCKYF
Trigger: GAAGTATTTACATTGGGCCAACCACCCAAGTTCAGA...ACCAGAGTCTGCCCCTGCAGCCTCGAACCTGGGGACATGTAGTTTCCCATTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp AACAGATCTGGCGGGTGGGATGTTCTGCTGTCACACCAGGGGACCAGAGCCCCACAATTTTGGTTAAGTTaGAGAAGCCCTCTGAACTTG +
Preference number: 5 (lower is better)
Translates to: NRSGGWDVLLSHQGTRAPQFWLS*RSPLNL
Trigger: CAAGTTCAGAGGGCTTCTCAAACTTAACCAAAATTG...TGGGGCTCTGGTCCCCTGGTGTGACAGCAGAACATCCCACCCGCCAGATCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp GGGGGAATCACTGGCCACTTGCAAACTGCCACTTCACTGCCAACTTTTATCCAAACCCTGGGGCGCTGCTaGCCATTACTTCCTCATCTT +
Preference number: 5 (lower is better)
Translates to: GGITGHLQTATSLPTFIQTLGRC*PLLPHL
Trigger: AAGATGAGGAAGTAATGGCAAGCAGCGCCCCAGGGT...TTGGATAAAAGTTGGCAGTGAAGTGGCAGTTTGCAAGTGGCCAGTGATTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp GGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGGAGCTTCCCCATAAATCCTaGGGACTGAGGACTTGGCTG +
Preference number: 5 (lower is better)
Translates to: GGYGNHLITSPREKRVWELPHKS*GLRTWL
Trigger: CAGCCAAGTCCTCAGTCCCAAGGATTTATGGGGAAG...CTCCCATACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp AGGTCACACCTGTCTTGGTATCAGGGGCTCAAGAGCTCTCAAAAATGTAAGGGGAACATGATGGCCGGGTaGGTCTTGAACTCCTGGCCT +
Preference number: 5 (lower is better)
Translates to: RSHLSWYQGLKSSQKCKGNMMAG*VLNSWP
Trigger: AGGCCAGGAGTTCAAGACCAACCCGGCCATCATGTT...CCCCTTACATTTTTGAGAGCTCTTGAGCCCCTGATACCAAGACAGGTGTGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602009.5
CDS TCA 90 bp AGGGAAGGGCCGTTTCCAACATACCTTTGTAACTGGGCAATCTCTTaGCTGATGTCATCAAGCTCCTTCACGCCAGTAAACTCCCCGGAG +
Preference number: 5 (lower is better)
Translates to: REGPFPTYLCNWAIS*LMSSSSFTPVNSPE
Trigger: CTCCGGGGAGTTTACTGGCGTGAAGGAGCTTGATGACATCAGTCAAGAGATTGCCCAGTTACAAAGGTATGTTGGAAACGGCCCTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596151.1
CDS-3UTR CAA 90 bp AAGTGCATGGCCACAGCGAACTCATCTCGATCCAAGTGCCCATCCTTGTCAATGAGGACTGGCTTGACTTaGTCTCCAGAGAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: KCMATANSSRSKCPSLSMRTGLT*SPESKP
Trigger: TGGTTTGCTCTCTGGAGACAAAGTCAAGCCAGTCCT...CATTGACAAGGATGGGCACTTGGATCGAGATGAGTTCGCTGTGGCCATGCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000593760.5
CDS-3UTR CAA 90 bp GGGGGAATCACTGGCCACTTGCAAACTGCCACTTCACTGCCAACTTTTATCCAAGCTCCTGCAAACTGCTaGTTTCCCGGTCTAGGTCAT +
Preference number: 5 (lower is better)
Translates to: GGITGHLQTATSLPTFIQAPANC*FPGLGH
Trigger: ATGACCTAGACCGGGAAACAAGCAGTTTGCAGGAGC...TTGGATAAAAGTTGGCAGTGAAGTGGCAGTTTGCAAGTGGCCAGTGATTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp GGTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATAGACATCTGCACAGCTGCTGCTCCTCATaGCCAAAAGAGGTGAAGTCT +
Preference number: 5 (lower is better)
Translates to: GPWSTVATVCVCIYRHLHSCCSS*PKEVKS
Trigger: AGACTTCACCTCTTTTGGCAATGAGGAGCAGCAGCT...GTGCAGATGTCTATATATACACACACACACCGTCGCCACCGTACTCCAAGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp AAACTGATCCAATTTTGGTTAAGTTTGAGAAGCCCTCTGAACTTGGGTGGTTGGGACAGCCGCCTGCACTaGGCTGGAACCAACGTTGGC +
Preference number: 5 (lower is better)
Translates to: KLIQFWLSLRSPLNLGGWDSRLH*AGTNVG
Trigger: GCCAACGTTGGTTCCAGCCAAGTGCAGGCGGCTGTC...CCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAACCAAAATTGGATCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp CTGGAACCAACGTTGGCCATGAACAGATCTGGCGGGTGGGATGTTCTGCTGTCATCTGAACTTGGGTGGTaGGCCCAATGTAAATACTTC +
Preference number: 5 (lower is better)
Translates to: LEPTLAMNRSGGWDVLLSSELGW*AQCKYF
Trigger: GAAGTATTTACATTGGGCCAACCACCCAAGTTCAGA...TGACAGCAGAACATCCCACCCGCCAGATCTGTTCATGGCCAACGTTGGTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp GGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTATGGGAGGAGGCCAATTCTTACTaGAAAGAGCAACACCCTGGG +
Preference number: 5 (lower is better)
Translates to: GGYGNHLITSPREKRVWEEANSY*KEQHPG
Trigger: CCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTC...CTCCCATACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp CCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTAAACAGTCTTGGCCCCTaGGTTTCCAAAGTGAACATA +
Preference number: 5 (lower is better)
Translates to: PGGGYGNHLITSPREKRVNSLGP*VSKVNI
Trigger: TATGTTCACTTTGGAAACCAAGGGGCCAAGACTGTT...TACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602009.5
CDS-3UTR CAA 90 bp CACCAAGTGCATGGCCACAGCGAACTCATCTCGATCCAAGTGCCCATCCTTGTCAAAATCCCATCAAATTaGGCCTTTTCTTCCACCCTC +
Preference number: 5 (lower is better)
Translates to: HQVHGHSELISIQVPILVKIPSN*AFSSTL
Trigger: GAGGGTGGAAGAAAAGGCCAAATTTGATGGGATTTT...GACAAGGATGGGCACTTGGATCGAGATGAGTTCGCTGTGGCCATGCACTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CAA 90 bp AGGTCACACCTGTCTTGGTATCAGGGGCTCAAGAGCTCTCAAAAATGTAAGGGGTTCATGAGGACTGGCTaGACTTTGTCTCCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: RSHLSWYQGLKSSQKCKGFMRTG*TLSPES
Trigger: GCTCTCTGGAGACAAAGTCAAGCCAGTCCTCATGAA...CCCCTTACATTTTTGAGAGCTCTTGAGCCCCTGATACCAAGACAGGTGTGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp TTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTAAGCATGTCTCGGAGCTaGGCCTTCTGCTGGTCCATC +
Preference number: 5 (lower is better)
Translates to: LQKWQCRINNARDRECEVSMSRS*AFCWSI
Trigger: GATGGACCAGCAGAAGGCCAAGCTCCGAGACATGCT...TACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp CATTTTATACAACGAGTGCATACACCACTGGGGGAGTGTCTGACTGATGCGTGGGTTGACTTCAGGGACTaGATGATGGTTTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: HFIQRVHTPLGECLTDAWVDFRD*MMVSSW
Trigger: CCAGCTGGAAACCATCATCAAGTCCCTGAAGTCAAC...CCACGCATCAGTCAGACACTCCCCCAGTGGTGTATGCACTCGTTGTATAAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp AGAGGTGAAGTCTGCAAAGCCCGAGGCAGAGGCCTTAGAAGGTTTAGCTGCAGAAATGGGTCACTTTCTTaGAAAGGGTCCCCTCCAAAT +
Preference number: 5 (lower is better)
Translates to: RGEVCKARGRGLRRFSCRNGSLS*KGSPPN
Trigger: ATTTGGAGGGGACCCTTTCAAAGAAAGTGACCCATT...TCTGCAGCTAAACCTTCTAAGGCCTCTGCCTCGGGCTTTGCAGACTTCACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR CAA 90 bp ATACTTCCGCAGAGATGGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCGGCCTATCTTGGACTTaGTTCTGGAAGCCAGGATTC +
Preference number: 5 (lower is better)
Translates to: ILPQRWRAFKTGSERIQAGLSWT*FWKPGF
Trigger: GAATCCTGGCTTCCAGAACAAAGTCCAAGATAGGCC...GGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCCATCTCTGCGGAAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp GCCCGGGGGCGGCTATGGAAACCACCTCATTACGAGTCCACGAGAAAAGAGAGTTTTTCAAGGTGTTCCTaGTGGAAACACACATACACA +
Preference number: 5 (lower is better)
Translates to: ARGRLWKPPHYESTRKESFSRCS*WKHTYT
Trigger: TGTGTATGTGTGTTTCCACAAGGAACACCTTGAAAA...ACTCTCTTTTCTCGTGGACTCGTAATGAGGTGGTTTCCATAGCCGCCCCCGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp ATACTTCCGCAGAGATGGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCGAGGCCAATTCTTACTaGAAAGAGCAACACCCTGGG +
Preference number: 5 (lower is better)
Translates to: ILPQRWRAFKTGSERIQAEANSY*KEQHPG
Trigger: CCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTC...GGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCCATCTCTGCGGAAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp TTCCGCAGAGATGGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCAATCTGTCTTTGGAGTaGGGGGAATCACTGGCCACT +
Preference number: 5 (lower is better)
Translates to: FRRDGGHSKQVLKGSRPINLSLE*GESLAT
Trigger: AGTGGCCAGTGATTCCCCCAACTCCAAAGACAGATT...GATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCCATCTCTGCGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp GAACAGAATCTCAAGTGCTTCTCGGAATCTGTGTTCTGTGATCACAAGTTGCGAGCTGCAAGGTCAGGGTaGAGCTCAGAATGCGGCTGT +
Preference number: 5 (lower is better)
Translates to: EQNLKCFSESVFCDHKLRAARSG*SSECGC
Trigger: ACAGCCGCATTCTGAGCTCAACCCTGACCTTGCAGC...TCGCAACTTGTGATCACAGAACACAGATTCCGAGAAGCACTTGAGATTCTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS CCA 90 bp ATGAGCAAACTTCCAGGTGAGCCTCTGATATTTCCGATAACAACCTaGGAGAGTTCGTGTAACATCTGGATGTGGAGGGAAGGGCCGTTT +
Preference number: 5 (lower is better)
Translates to: MSKLPGEPLIFPITT*ESSCNIWMWREGPF
Trigger: AAACGGCCCTTCCCTCCACATCCAGATGTTACACGAACTCTCCCAGGTTGTTATCGGAAATATCAGAGGCTCACCTGGAAGTTTGCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596151.1
CDS-3UTR CAA 90 bp CTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGGTTGGCTGTGTTTGCTaGAGGCTGTGCTTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: LFFLQKWQCRINNARDREVGCVC*RLCLGD
Trigger: GTCCCCCAAGCACAGCCTCAAGCAAACACAGCCAAC...CTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp GTTAAGTTTGAGAAGCCCTCTGAACTTGGGTGGTTGGCCCAATGTAAATACTTCCACTGTTGGCTGTGTTaGCTTGAGGCTGTGCTTGGG +
Preference number: 5 (lower is better)
Translates to: VKFEKPSELGWLAQCKYFHCWLC*LEAVLG
Trigger: CCCAAGCACAGCCTCAAGCAAACACAGCCAACAGTG...GAAGTATTTACATTGGGCCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp TTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTATCATCAAATCGCATCTaGTCTGCCACGGGCACCACC +
Preference number: 5 (lower is better)
Translates to: LQKWQCRINNARDRECEVSSNRI*SATGTT
Trigger: GGTGGTGCCCGTGGCAGACAAGATGCGATTTGATGA...TACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp ATACTTCCGCAGAGATGGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCAACGCGAATTGGTCTTaGCTTAACTTCCCCGTTTGC +
Preference number: 5 (lower is better)
Translates to: ILPQRWRAFKTGSERIQANANWS*LNFPVC
Trigger: GCAAACGGGGAAGTTAAGCAAAGACCAATTCGCGTT...GGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCCATCTCTGCGGAAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp GGGGGAATCACTGGCCACTTGCAAACTGCCACTTCACTGCCAACTTTTATCCAAAACGCGAATTGGTCTTaGCTTAACTTCCCCGTTTGC +
Preference number: 5 (lower is better)
Translates to: GGITGHLQTATSLPTFIQNANWS*LNFPVC
Trigger: GCAAACGGGGAAGTTAAGCAAAGACCAATTCGCGTT...TTGGATAAAAGTTGGCAGTGAAGTGGCAGTTTGCAAGTGGCCAGTGATTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp GTAAAAATCTGTCTTTGGAGTTGGGGGAATCACTGGCCACTTGCAAACTGCCACGTTGACTTCAGGGACTaGATGATGGTTTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: VKICLWSWGNHWPLANCHVDFRD*MMVSSW
Trigger: CCAGCTGGAAACCATCATCAAGTCCCTGAAGTCAAC...GTGGCAGTTTGCAAGTGGCCAGTGATTCCCCCAACTCCAAAGACAGATTTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp TGTAAGGGCTTCCCCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCAACAAGGCTTTATTTTaGAAAGGATCATCCATGGCT +
Preference number: 5 (lower is better)
Translates to: CKGFPRRCDLSRSCSRVCNKALF*KGSSMA
Trigger: AGCCATGGATGATCCTTTCAAAAATAAAGCCTTGTT...GCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGGGGAAGCCCTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp AAGTGCATGGCCACAGCGAACTCATCTCGATCCAAGTGCCCATCCTTGTCAATGATGGATCTGTTGAAGTaGTCTGCTGTTCTGCAAAGG +
Preference number: 5 (lower is better)
Translates to: KCMATANSSRSKCPSLSMMDLLK*SAVLQR
Trigger: CCTTTGCAGAACAGCAGACAACTTCAACAGATCCAT...CATTGACAAGGATGGGCACTTGGATCGAGATGAGTTCGCTGTGGCCATGCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CAA 90 bp GTCCTTGGAGTACGGTGGCGACGGTGTGTGTGTGTATATATAGACATCTGCACTAGGTGTACTTTTACCTaGGACATCTGGCTGAAGTCG +
Preference number: 5 (lower is better)
Translates to: VLGVRWRRCVCVYIDICTRCTFT*DIWLKS
Trigger: CGACTTCAGCCAGATGTCCAAGGTAAAAGTACACCT...AGTGCAGATGTCTATATATACACACACACACCGTCGCCACCGTACTCCAAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602022.5
CDS-3UTR CAA 90 bp GGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCTTGGACTTTGTTCTTCCCCATAAATCCTaGGGACTGAGGACTTGGCTG +
Preference number: 5 (lower is better)
Translates to: GGHSKQVLKGSRPILDFVLPHKS*GLRTWL
Trigger: CAGCCAAGTCCTCAGTCCCAAGGATTTATGGGGAAG...AACAAAGTCCAAGATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp TTCCGCAGAGATGGAGGGCATTCAAAACAGGTTCTGAAAGGATCCAGGCCTATCGATCTTAGAACAGTCTaGGCCCCTTGGTTTCCAAAG +
Preference number: 5 (lower is better)
Translates to: FRRDGGHSKQVLKGSRPIDLRTV*APWFPK
Trigger: CTTTGGAAACCAAGGGGCCAAGACTGTTCTAAGATC...GATAGGCCTGGATCCTTTCAGAACCTGTTTTGAATGCCCTCCATCTCTGCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602009.5
CDS-3UTR CAA 90 bp GTGATCACAAGTTGCGACCGCTGCCAACCCCAAGATGCTCAGAGACTCATCTGCCAAAACAAGATAGTATaGGAGACCCATTTTCCACAG +
Preference number: 5 (lower is better)
Translates to: VITSCDRCQPQDAQRLICQNKIV*ETHFPQ
Trigger: CTGTGGAAAATGGGTCTCCAATACTATCTTGTTTTG...GCAGATGAGTCTCTGAGCATCTTGGGGTTGGCAGCGGTCGCAACTTGTGATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS GCA 90 bp CATGCTCAAATTCAGATTGCTCAAGGTAACTTCATGGCCACTCTGTaGACAGGCCACCAGTCTCAGTGCAACATAGAAACCCTGTTTGTC +
Preference number: 5 (lower is better)
Translates to: HAQIQIAQGNFMATL*TGHQSQCNIETLFV
Trigger: GACAAACAGGGTTTCTATGTTGCACTGAGACTGGTGGCCTGTGCACAGAGTGGCCATGAAGTTACCTTGAGCAATCTGAATTTGAGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000248070.10
ENST00000455140.7
ENST00000535753.6
ENST00000594975.5
ENST00000596037.5
ENST00000597559.5
ENST00000597937.5
ENST00000602022.5
CDS GCA 90 bp CATGCTCAAATTCAGATTGCTCAAGGTAACTTCATGGCCACTCTGTaGACAGGCCACCAGTCTCAGTGCAACATAGAAACCCTTCTGGAT +
Preference number: 5 (lower is better)
Translates to: HAQIQIAQGNFMATL*TGHQSQCNIETLLD
Trigger: ATCCAGAAGGGTTTCTATGTTGCACTGAGACTGGTGGCCTGTGCACAGAGTGGCCATGAAGTTACCTTGAGCAATCTGAATTTGAGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CAA 90 bp TTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGTTGGCTGTGTTTGCTaGAGGCTGTGCTTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: FFLQKWQCRINNARDRECVGCVC*RLCLGD
Trigger: GTCCCCCAAGCACAGCCTCAAGCAAACACAGCCAAC...ACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp CTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGCACTGTTGGCTGTGTTaGCTTGAGGCTGTGCTTGGG +
Preference number: 5 (lower is better)
Translates to: LFFLQKWQCRINNARDREHCWLC*LEAVLG
Trigger: CCCAAGCACAGCCTCAAGCAAACACAGCCAACAGTG...CTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp CAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTACCAAACGCGAATTGGTCTTaGCTTAACTTCCCCGTTTGC +
Preference number: 5 (lower is better)
Translates to: QKWQCRINNARDRECEVPNANWS*LNFPVC
Trigger: GCAAACGGGGAAGTTAAGCAAAGACCAATTCGCGTT...TGGTACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp GAGAAACTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGCATGTCTCGGAGCTaGGCCTTCTGCTGGTCCATC +
Preference number: 5 (lower is better)
Translates to: EKLFFLQKWQCRINNARDSMSRS*AFCWSI
Trigger: GATGGACCAGCAGAAGGCCAAGCTCCGAGACATGCT...GTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAGTTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp GTGATCACAAGTTGCGACCGCTGCCAACCCCAAGATGCTCAGAGACTCATCTGCAACAAGGCTTTATTTTaGAAAGGATCATCCATGGCT +
Preference number: 5 (lower is better)
Translates to: VITSCDRCQPQDAQRLICNKALF*KGSSMA
Trigger: AGCCATGGATGATCCTTTCAAAAATAAAGCCTTGTT...GCAGATGAGTCTCTGAGCATCTTGGGGTTGGCAGCGGTCGCAACTTGTGATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CAA 90 bp CCAGGAGATGTGACCTTTCCAGGTCTTGCAGCCGAGTCTGCTCACCCTGAACAAAACTCTTGCGTGTTGTaGCTAAATAACAAGGCTTTA +
Preference number: 5 (lower is better)
Translates to: PGDVTFPGLAAESAHPEQNSCVL*LNNKAL
Trigger: TAAAGCCTTGTTATTTAGCAACAACACGCAAGAGTT...TTGTTCAGGGTGAGCAGACTCGGCTGCAAGACCTGGAAAGGTCACATCTCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp GAACGCTGGAATCAAAACAAGATAGTATTGGAGACCCATTTTCCACAGCTCTGTTGGAACGGGTCGCCTTaGAAGGGGTCAGCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: ERWNQNKIVLETHFPQLCWNGSP*KGSAPL
Trigger: TAAAGGAGCTGACCCCTTCAAAGGCGACCCGTTCCA...ACAGAGCTGTGGAAAATGGGTCTCCAATACTATCTTGTTTTGATTCCAGCGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CAA 90 bp GAGGCCTTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATGGGTCTTTTCCACTACTCCAAATGGATCTGTaGAAGTTGTCTGCTGTTCTG +
Preference number: 5 (lower is better)
Translates to: EALEGLAAEEGTNGSFPLLQMDL*KLSAVL
Trigger: CAGAACAGCAGACAACTTCAACAGATCCATTTGGAG...TAGTGGAAAAGACCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAAGGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR CAA 90 bp TTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTAAAACCCCTTTTTACTTaGGAACGGGTCGCCGCTGTC +
Preference number: 5 (lower is better)
Translates to: LQKWQCRINNARDRECEVKPLFT*ERVAAV
Trigger: GACAGCGGCGACCCGTTCCAAAGTAAAAAGGGGTTT...TACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp CTGTCTTTGGAGTTGGGGGAATCACTGGCCACTTGCAAACTGCCACTTCACTGCGAAACTGATCCAATTTaGGTTAAGTTTGAGAAGCCC +
Preference number: 5 (lower is better)
Translates to: LSLELGESLATCKLPLHCETDPI*VKFEKP
Trigger: GGGCTTCTCAAACTTAACCAAAATTGGATCAGTTTC...GCAGTGAAGTGGCAGTTTGCAAGTGGCCAGTGATTCCCCCAACTCCAAAGACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp TTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCTGGGGCGCTGCTTGCGAAACTGATCCAATTTaGGTTAAGTTTGAGAAGCCC +
Preference number: 5 (lower is better)
Translates to: FRRGQFLLERATPWGAACETDPI*VKFEKP
Trigger: GGGCTTCTCAAACTTAACCAAAATTGGATCAGTTTC...GCAAGCAGCGCCCCAGGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp GTAAAAATCTGTCTTTGGAGTTGGGGGAATCACTGGCCACTTGCAAACTGCCACCTCCAAGGAGCCCACTaGTACCAGAAAGACAAAAGT +
Preference number: 5 (lower is better)
Translates to: VKICLWSWGNHWPLANCHLQGAH*YQKDKS
Trigger: ACTTTTGTCTTTCTGGTACAAGTGGGCTCCTTGGAG...GTGGCAGTTTGCAAGTGGCCAGTGATTCCCCCAACTCCAAAGACAGATTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000602009.5
CDS CCA 90 bp ATATTTCCGATAACAACCTGGGAGAGTTCGTGTAACATCTGGATGTaGAGGGAAGGGCCGTTTCCAACATACCTTTGTAACTGGGCAATC +
Preference number: 5 (lower is better)
Translates to: IFPITTWESSCNIWM*REGPFPTYLCNWAI
Trigger: GATTGCCCAGTTACAAAGGTATGTTGGAAACGGCCCTTCCCTCCACATCCAGATGTTACACGAACTCTCCCAGGTTGTTATCGGAAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596151.1
CDS-3UTR CAA 90 bp TTTGTCTCCAGAGAGCAAACCATTGATGGGCAAGAGGCTTTCAAAAATCCCATCAGGACTGGCTTGACTTaGTCTCCAGAGAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: FVSREQTIDGQEAFKNPIRTGLT*SPESKP
Trigger: TGGTTTGCTCTCTGGAGACAAAGTCAAGCCAGTCCT...GATGGGATTTTTGAAAGCCTCTTGCCCATCAATGGTTTGCTCTCTGGAGACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000596037.5
CDS-3UTR CAA 90 bp CTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTCCAAGTGCCCATCCTaGTCAATGTCACTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: LFFLQKWQCRINNARDRESKCPS*SMSLRS
Trigger: GGACCTCAGTGACATTGACAAGGATGGGCACTTGGA...CTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp TCTCCAGAGAGCAAACCATTGATGGGCAAGAGGCTTTCAAAAATCCCATCAAATTCCAAGTGCCCATCCTaGTCAATGTCACTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: SPESKPLMGKRLSKIPSNSKCPS*SMSLRS
Trigger: GGACCTCAGTGACATTGACAAGGATGGGCACTTGGA...ATTTGATGGGATTTTTGAAAGCCTCTTGCCCATCAATGGTTTGCTCTCTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000592031.5
ENST00000596037.5
CDS-3UTR CAA 90 bp AAACATAACCAAAATTTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCCGGTTCAGCTCCGACTaGGCTCGGTTCAGATCGTCT +
Preference number: 5 (lower is better)
Translates to: KHNQNFRRGQFLLERATPRFSSD*ARFRSS
Trigger: AGACGATCTGAACCGAGCCAAGTCGGAGCTGAACCG...GGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAAATTTTGGTTATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp CATTTTATACAACGAGTGCATACACCACTGGGGGAGTGTCTGACTGATGCGTGGTTCTTTGTCTGTTTCTaGAAGAAGTCGTCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: HFIQRVHTPLGECLTDAWFFVCF*KKSSVA
Trigger: TGCCACTGACGACTTCTTCAAGAAACAGACAAAGAA...CCACGCATCAGTCAGACACTCCCCCAGTGGTGTATGCACTCGTTGTATAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455140.7
ENST00000602022.5
CDS-3UTR CAA 90 bp AAACTGATCCAATTTTGGTTAAGTTTGAGAAGCCCTCTGAACTTGGGTGGTTGGAGAAGCCCTCTGAACTaGGGTGGTTGGCCCAATGTA +
Preference number: 5 (lower is better)
Translates to: KLIQFWLSLRSPLNLGGWRSPLN*GGWPNV
Trigger: TACATTGGGCCAACCACCCAAGTTCAGAGGGCTTCT...CCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAACCAAAATTGGATCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp AAACTGATCCAATTTTGGTTAAGTTTGAGAAGCCCTCTGAACTTGGGTGGTTGGAAGGTCACACCTGTCTaGGTATCAGGGGCTCAAGAG +
Preference number: 5 (lower is better)
Translates to: KLIQFWLSLRSPLNLGGWKVTPV*VSGAQE
Trigger: CTCTTGAGCCCCTGATACCAAGACAGGTGTGACCTT...CCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAACCAAAATTGGATCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp GAGAAACTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACACAGTCTTCTTTCTCTaGGAGGGTGGGATGAGGGAC +
Preference number: 5 (lower is better)
Translates to: EKLFFLQKWQCRINNARDTVFFL*EGGMRD
Trigger: GTCCCTCATCCCACCCTCCAAGAGAAAGAAGACTGT...GTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAGTTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp CTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGGTTGACTTCAGGGACTaGATGATGGTTTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: LFFLQKWQCRINNARDREVDFRD*MMVSSW
Trigger: CCAGCTGGAAACCATCATCAAGTCCCTGAAGTCAAC...CTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp TCTCCAGAGAGCAAACCATTGATGGGCAAGAGGCTTTCAAAAATCCCATCAAATTTGCTCCTTGCCTGGTaGATTTCGTCTTGCGTTGAC +
Preference number: 5 (lower is better)
Translates to: SPESKPLMGKRLSKIPSNLLLAW*ISSCVD
Trigger: GTCAACGCAAGACGAAATCAACCAGGCAAGGAGCAA...ATTTGATGGGATTTTTGAAAGCCTCTTGCCCATCAATGGTTTGCTCTCTGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592031.5
CDS-3UTR CAA 90 bp CAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTACCATGCAACTCTTGCGTGTaGTTGCTAAATAACAAGGCT +
Preference number: 5 (lower is better)
Translates to: QKWQCRINNARDRECEVPCNSCV*LLNNKA
Trigger: AGCCTTGTTATTTAGCAACAACACGCAAGAGTTGCA...TGGTACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp TTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTAAACCCCTTTTTACTTaGGAACGGGTCGCCGCTGTC +
Preference number: 5 (lower is better)
Translates to: FFLQKWQCRINNARDRECKPLFT*ERVAAV
Trigger: GACAGCGGCGACCCGTTCCAAAGTAAAAAGGGGTTT...ACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp AAACATAACCAAAATTTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCACCCTGGGGCGCTGCTaGCCATTACTTCCTCATCTT +
Preference number: 5 (lower is better)
Translates to: KHNQNFRRGQFLLERATPTLGRC*PLLPHL
Trigger: AAGATGAGGAAGTAATGGCAAGCAGCGCCCCAGGGT...GGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAAATTTTGGTTATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp AAACTGATCCAATTTTGGTTAAGTTTGAGAAGCCCTCTGAACTTGGGTGGTTGGAATCTGTCTTTGGAGTaGGGGGAATCACTGGCCACT +
Preference number: 5 (lower is better)
Translates to: KLIQFWLSLRSPLNLGGWNLSLE*GESLAT
Trigger: AGTGGCCAGTGATTCCCCCAACTCCAAAGACAGATT...CCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAACCAAAATTGGATCAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp CTTTATTTCAAAATGAAAACTTCCCGTGTTAAGTTTGACAGCCGTGCTCATGCCGCCCAGCCCCTCCATTaGCTCTGTGTACATGTGTAT +
Preference number: 5 (lower is better)
Translates to: LYFKMKTSRVKFDSRAHAAQPLH*LCVHVY
Trigger: ATACACATGTACACAGAGCAAATGGAGGGGCTGGGC...GGCATGAGCACGGCTGTCAAACTTAACACGGGAAGTTTTCATTTTGAAATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602151.1
CDS-3UTR CAA 90 bp AGCAACACATTTGCTTTTCAAGGTGTTCCTTGTGGAAACACACATACACATAGATCCAAGTGCCCATCCTaGTCAATGTCACTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: SNTFAFQGVPCGNTHTHRSKCPS*SMSLRS
Trigger: GGACCTCAGTGACATTGACAAGGATGGGCACTTGGA...TCTATGTGTATGTGTGTTTCCACAAGGAACACCTTGAAAAGCAAATGTGTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp AGCAACACATTTGCTTTTCAAGGTGTTCCTTGTGGAAACACACATACACATAGAACAGTCTTCTTTCTCTaGGAGGGTGGGATGAGGGAC +
Preference number: 5 (lower is better)
Translates to: SNTFAFQGVPCGNTHTHRTVFFL*EGGMRD
Trigger: GTCCCTCATCCCACCCTCCAAGAGAAAGAAGACTGT...TCTATGTGTATGTGTGTTTCCACAAGGAACACCTTGAAAAGCAAATGTGTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp GAGAAACTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACTTGCTCCTTGCCTGGTaGATTTCGTCTTGCGTTGAC +
Preference number: 5 (lower is better)
Translates to: EKLFFLQKWQCRINNARDLLLAW*ISSCVD
Trigger: GTCAACGCAAGACGAAATCAACCAGGCAAGGAGCAA...GTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAGTTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp GAGGCCTTAGAAGGTTTAGCTGCAGAGGAGGGGACAAATGGGTCTTTTCCACTAAACTCTTGCGTGTTGTaGCTAAATAACAAGGCTTTA +
Preference number: 5 (lower is better)
Translates to: EALEGLAAEEGTNGSFPLNSCVL*LNNKAL
Trigger: TAAAGCCTTGTTATTTAGCAACAACACGCAAGAGTT...TAGTGGAAAAGACCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAAGGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000592031.5
ENST00000602022.5
CDS-3UTR CAA 90 bp AAACAGAGCTGCAAGGTCAGGGTTGAGCTCAGAATGCGGCTGTACAAGTGTCATAACTCTTGCGTGTTGTaGCTAAATAACAAGGCTTTA +
Preference number: 5 (lower is better)
Translates to: KQSCKVRVELRMRLYKCHNSCVL*LNNKAL
Trigger: TAAAGCCTTGTTATTTAGCAACAACACGCAAGAGTT...ATGACACTTGTACAGCCGCATTCTGAGCTCAACCCTGACCTTGCAGCTCTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CAA 90 bp TTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTATTAAATGGGTCAGATTaGAAGGGGTCTTCTGTCTGG +
Preference number: 5 (lower is better)
Translates to: LQKWQCRINNARDRECEVLNGSD*KGSSVW
Trigger: CCAGACAGAAGACCCCTTCAAATCTGACCCATTTAA...TACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp GACCTTTATTTCAAAATGAAAACTTCCCGTGTTAAGTTTGACAGCCGTGCTCATCTTCCCGTGTTAAGTTaGACAGCCGTGCTCATGCCT +
Preference number: 5 (lower is better)
Translates to: DLYFKMKTSRVKFDSRAHLPVLS*TAVLMP
Trigger: AGGCATGAGCACGGCTGTCAAACTTAACACGGGAAG...ATGAGCACGGCTGTCAAACTTAACACGGGAAGTTTTCATTTTGAAATAAAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602151.1
CDS TCA 90 bp GCACAAAATGATCTTAGAACAGTCTTGGCCCCTTGGTTTCCAAAGTaGACATATACCCTGAAGGAAATAACGTTATGGCAACCTCGGATC +
Preference number: 5 (lower is better)
Translates to: AQNDLRTVLAPWFPK*TYTLKEITLWQPRI
Trigger: GATCCGAGGTTGCCATAACGTTATTTCCTTCAGGGTATATGTTCACTTTGGAAACCAAGGGGCCAAGACTGTTCTAAGATCATTTTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602009.5
CDS-3UTR CAA 90 bp TTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTATGCAACTCTTGCGTGTaGTTGCTAAATAACAAGGCT +
Preference number: 5 (lower is better)
Translates to: LQKWQCRINNARDRECEVCNSCV*LLNNKA
Trigger: AGCCTTGTTATTTAGCAACAACACGCAAGAGTTGCA...TACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp GAACAGAATCTCAAGTGCTTCTCGGAATCTGTGTTCTGTGATCACAAGTTGCGATGCAACTCTTGCGTGTaGTTGCTAAATAACAAGGCT +
Preference number: 5 (lower is better)
Translates to: EQNLKCFSESVFCDHKLRCNSCV*LLNNKA
Trigger: AGCCTTGTTATTTAGCAACAACACGCAAGAGTTGCA...TCGCAACTTGTGATCACAGAACACAGATTCCGAGAAGCACTTGAGATTCTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS-3UTR CAA 90 bp CTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGCTCCAAATGGATCTGTaGAAGTTGTCTGCTGTTCTG +
Preference number: 5 (lower is better)
Translates to: LFFLQKWQCRINNARDRELQMDL*KLSAVL
Trigger: CAGAACAGCAGACAACTTCAACAGATCCATTTGGAG...CTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp GAGAAACTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACTTAAATGGGTCAGATTaGAAGGGGTCTTCTGTCTGG +
Preference number: 5 (lower is better)
Translates to: EKLFFLQKWQCRINNARDLNGSD*KGSSVW
Trigger: CCAGACAGAAGACCCCTTCAAATCTGACCCATTTAA...GTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAGTTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp GTTAAGTTTGAGAAGCCCTCTGAACTTGGGTGGTTGGCCCAATGTAAATACTTCCAATTTTGGTTAAGTTaGAGAAGCCCTCTGAACTTG +
Preference number: 5 (lower is better)
Translates to: VKFEKPSELGWLAQCKYFQFWLS*RSPLNL
Trigger: CAAGTTCAGAGGGCTTCTCAAACTTAACCAAAATTG...GAAGTATTTACATTGGGCCAACCACCCAAGTTCAGAGGGCTTCTCAAACTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS GCA 90 bp GCAGCAAAAACCACAGAATGTGACCTAAAGATGCAAGATTTAAACTaGAGCCCTTTAATAATCCAACTCCTGACACTTAGTTGTCCAGGT +
Preference number: 5 (lower is better)
Translates to: AAKTTECDLKMQDLN*SPLIIQLLTLSCPG
Trigger: ACCTGGACAACTAAGTGTCAGGAGTTGGATTATTAAAGGGCTGCAGTTTAAATCTTGCATCTTTAGGTCACATTCTGTGGTTTTTGCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597559.5
CDS-3UTR CAA 90 bp TTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTGAGGTAAACAAGGCTTTATTTTaGAAAGGATCATCCATGGCT +
Preference number: 5 (lower is better)
Translates to: LQKWQCRINNARDRECEVNKALF*KGSSMA
Trigger: AGCCATGGATGATCCTTTCAAAAATAAAGCCTTGTT...TACCTCACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp GAGAAACTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACTGCAACTCTTGCGTGTaGTTGCTAAATAACAAGGCT +
Preference number: 5 (lower is better)
Translates to: EKLFFLQKWQCRINNARDCNSCV*LLNNKA
Trigger: AGCCTTGTTATTTAGCAACAACACGCAAGAGTTGCA...GTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAGTTTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp TTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAGAGAGTGTAAGAAGCTGGGAGGTTaGCCTTTAAAAGGAGACAAA +
Preference number: 5 (lower is better)
Translates to: FFLQKWQCRINNARDRECKKLGG*PLKGDK
Trigger: TTTGTCTCCTTTTAAAGGCAAACCTCCCAGCTTCTT...ACACTCTCTGTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp GAGAAACTGTTTTTCTTACAGAAGTGGCAGTGTAGAATAAATAACGCGAGGGACAACTCTTGCGTGTTGTaGCTAAATAACAAGGCTTTA +
Preference number: 5 (lower is better)
Translates to: EKLFFLQKWQCRINNARDNSCVL*LNNKAL
Trigger: TAAAGCCTTGTTATTTAGCAACAACACGCAAGAGTT...GTCCCTCGCGTTATTTATTCTACACTGCCACTTCTGTAAGAAAAACAGTTTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000248070.10
ENST00000535753.6
ENST00000592031.5
CDS-3UTR CAA 90 bp AAACATAACCAAAATTTCAGGAGAGGCCAATTCTTACTTGAAAGAGCAACACCCTTTTCAAGGTGTTCCTaGTGGAAACACACATACACA +
Preference number: 5 (lower is better)
Translates to: KHNQNFRRGQFLLERATPFSRCS*WKHTYT
Trigger: TGTGTATGTGTGTTTCCACAAGGAACACCTTGAAAA...GGGTGTTGCTCTTTCAAGTAAGAATTGGCCTCTCCTGAAATTTTGGTTATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000597937.5
ENST00000602009.5
CDS-3UTR CAA 90 bp GACCTTTATTTCAAAATGAAAACTTCCCGTGTTAAGTTTGACAGCCGTGCTCATTGTGTATATACCTGTTaGTCCAAGAACCCTTTACCT +
Preference number: 5 (lower is better)
Translates to: DLYFKMKTSRVKFDSRAHCVYTC*SKNPLP
Trigger: AGGTAAAGGGTTCTTGGACAAACAGGTATATACACA...ATGAGCACGGCTGTCAAACTTAACACGGGAAGTTTTCATTTTGAAATAAAGGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602151.1
CDS CCA 72 bp GGGAACGGGGGCGGGGCTGCAGCCACGCGTGCGCACTaGGACGACGGGAGGGCGGTGCGCAGGCCGCCTGTC +
Preference number: 6 (lower is better)
Translates to: GNGGGAAATRAH*DDGRAVRRPPV
Trigger: GACAGGCGGCCTGCGCACCGCCCTCCCGTCGTCCCAGTGCGCACGCGTGGCTGCAGCCCCGCCCCCGTTCCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000248070.10
ENST00000594975.5
CDS GCA 72 bp GCCCTGGCCCCGGGTCTTGTCCTTCGTCCTAGCTGCTaGCTGAGTGTGGCAGGAGTCTCCCATGGTGGGGCA +
Preference number: 6 (lower is better)
Translates to: ALAPGLVLRPSC*LSVAGVSHGGA
Trigger: TGCCCCACCATGGGAGACTCCTGCCACACTCAGGCAGCAGCTAGGACGAAGGACAAGACCCGGGGCCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602009.5
CDS TCA 72 bp ACGAATTTCCAGTGGGAATCTGCTGGGAGAGGGGGATaGGCGGCGCCGCCATCTTCCCGCGGACTCGGGCTC +
Preference number: 6 (lower is better)
Translates to: TNFQWESAGRGG*AAPPSSRGLGL
Trigger: GAGCCCGAGTCCGCGGGAAGATGGCGGCGCCGCTCATCCCCCTCTCCCAGCAGATTCCCACTGGAAATTCGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000248070.10
ENST00000455140.7
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000595845.1
ENST00000597559.5
CDS TCA 72 bp CTGCCACCTGGGCATTTGGATCCACCAGCTGCAGCCTaGGAGGTCTGCAGCGACCAGGCCACTACCCAGGAG +
Preference number: 6 (lower is better)
Translates to: LPPGHLDPPAAA*EVCSDQATTQE
Trigger: CTCCTGGGTAGTGGCCTGGTCGCTGCAGACCTCTCAGGCTGCAGCTGGTGGATCCAAATGCCCAGGTGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595845.1
CDS GCA 72 bp GCCTTCTCGCTCTCCCGCTTGGCCCACGCCAGCTGCTaGTCCTCATTGCCAAATTTGGAACGGGTCGCCGCT +
Preference number: 6 (lower is better)
Translates to: AFSLSRLAHASC*SSLPNLERVAA
Trigger: AGCGGCGACCCGTTCCAAATTTGGCAATGAGGAGCAGCAGCTGGCGTGGGCCAAGCGGGAGAGCGAGAAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594851.5
CDS CCA 72 bp CCAAATTTGGAACGGGTCGCCGCTGTCAGCCCCGAGTaGCTGGAATGGATCGGGGGCCTCGGGAAAGTCTGC +
Preference number: 6 (lower is better)
Translates to: PNLERVAAVSPE*LEWIGGLGKVC
Trigger: GCAGACTTTCCCGAGGCCCCCGATCCATTCCAGCCACTCGGGGCTGACAGCGGCGACCCGTTCCAAATTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594851.5
CDS CAA 72 bp GCCAGCCTCTCCTGTTCCGCCTTCTCGCTCTCCCGCTaGGCCCACGCCAGCTGCTGCTCCTCATTGCCAAAT +
Preference number: 6 (lower is better)
Translates to: ASLSCSAFSLSR*AHASCCSSLPN
Trigger: ATTTGGCAATGAGGAGCAGCAGCTGGCGTGGGCCAAGCGGGAGAGCGAGAAGGCGGAACAGGAGAGGCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594851.5
CDS CCA 72 bp CCAGCCTCTCCTGTTCCGCCTTCTCGCTCTCCCGCTTaGCCCACGCCAGCTGCTGCTCCTCATTGCCAAATT +
Preference number: 6 (lower is better)
Translates to: PASPVPPSRSPA*PTPAAAPHCQI
Trigger: AATTTGGCAATGAGGAGCAGCAGCTGGCGTGGGCCAAGCGGGAGAGCGAGAAGGCGGAACAGGAGAGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594851.5
CDS CCA 72 bp TACCAAAGTAGTGGTGGGGGCTGCCACCTGGGCATTTaGATCCACCAGCTGCAGCCTGAGAGGTCTGCAGCG +
Preference number: 6 (lower is better)
Translates to: YQSSGGGCHLGI*IHQLQPERSAA
Trigger: CGCTGCAGACCTCTCAGGCTGCAGCTGGTGGATCCAAATGCCCAGGTGGCAGCCCCCACCACTACTTTGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595845.1
CDS CAA 90 bp TGCTGCCTGAGTGTGGCAGGAGTCTCCCATGGTGGGGCAGTGTCTTaGCAGGGAGACAAAGATCAGTCTCACCTGCCTCCAAGGAGCCCA +
Preference number: 6 (lower is better)
Translates to: CCLSVAGVSHGGAVS*QGDKDQSHLPPRSP
Trigger: TGGGCTCCTTGGAGGCAGGTGAGACTGATCTTTGTCTCCCTGCAAAGACACTGCCCCACCATGGGAGACTCCTGCCACACTCAGGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602009.5
CDS GCA 72 bp ATCATCCTTTACCATGGCTCCAAAACTGCCCCTCTCTaGCAGGGAGACGCCTTCGCTCAGGTTGGCCAGGTC +
Preference number: 6 (lower is better)
Translates to: IILYHGSKTAPL*QGDAFAQVGQV
Trigger: GACCTGGCCAACCTGAGCGAAGGCGTCTCCCTGGCAGAGAGGGGCAGTTTTGGAGCCATGGTAAAGGATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594975.5
CDS GCA 72 bp CTGCAACTTCCGACTCCCAGGTTCAAGCAATTCTCGTaGCTCAGCACTCGTACCTCCCGAGTAGCTGGGATC +
Preference number: 6 (lower is better)
Translates to: LQLPTPRFKQFS*LSTRTSRVAGI
Trigger: GATCCCAGCTACTCGGGAGGTACGAGTGCTGAGGCACGAGAATTGCTTGAACCTGGGAGTCGGAAGTTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602009.5
CDS GCA 72 bp GGGTTTCTTATCTGCTACCAAAGTAGTGGTGGGGGCTaGCACCTGGGCATTTGGATCCACCAGCTGCAGCCT +
Preference number: 6 (lower is better)
Translates to: GFLICYQSSGGG*HLGIWIHQLQP
Trigger: AGGCTGCAGCTGGTGGATCCAAATGCCCAGGTGGCAGCCCCCACCACTACTTTGGTAGCAGATAAGAAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595845.1
CDS CCA 72 bp GGATCGGGGGCCTCGGGAAAGTCTGCGGAACCAAGCTaGCTTACAGGTGTACTTTTACCTTGGACATCTGGC +
Preference number: 6 (lower is better)
Translates to: GSGASGKSAEPS*LTGVLLPWTSG
Trigger: GCCAGATGTCCAAGGTAAAAGTACACCTGTAAGCCAGCTTGGTTCCGCAGACTTTCCCGAGGCCCCCGATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000594975.5
ENST00000602022.5
CDS CCA 72 bp TGCTCATGCCTAGTAATACTTGACAGTGGAGGAATGTaGAAGGAGCCGTGGAGGTCACCCAGCCTGGGGGCT +
Preference number: 6 (lower is better)
Translates to: CSCLVILDSGGM*KEPWRSPSLGA
Trigger: AGCCCCCAGGCTGGGTGACCTCCACGGCTCCTTCCACATTCCTCCACTGTCAAGTATTACTAGGCATGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602151.1
CDS CCA 72 bp GGCATGCTCAAATTCAGATTGCTCAAGGTAACTTCATaGCCACTCTGTGCACAGGCCACCAGTCTCAGTGCA +
Preference number: 6 (lower is better)
Translates to: GMLKFRLLKVTS*PLCAQATSLSA
Trigger: TGCACTGAGACTGGTGGCCTGTGCACAGAGTGGCCATGAAGTTACCTTGAGCAATCTGAATTTGAGCATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000248070.10
ENST00000455140.7
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000596037.5
ENST00000597559.5
ENST00000597937.5
ENST00000602022.5
CDS CAA 90 bp CATTCCTTGGACATCTGGCTGAAGTCGGCAAAGCCTTCAGCACTATaGAAGGACCCACTTCCGAAGGGATCTAAGGTTCCAAAGGGATCT +
Preference number: 6 (lower is better)
Translates to: HSLDIWLKSAKPSAL*KDPLPKGSKVPKGS
Trigger: AGATCCCTTTGGAACCTTAGATCCCTTCGGAAGTGGGTCCTTCAATAGTGCTGAAGGCTTTGCCGACTTCAGCCAGATGTCCAAGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599790.1
CDS CAA 90 bp TTTACCTTGGACATCTGGCTGAAGTCGGCAAAGCCTTCAGCACTATaGAAGGACCCACTTCCGAAGGGATCTAAGGTTCCAAAGGGATCT +
Preference number: 6 (lower is better)
Translates to: FTLDIWLKSAKPSAL*KDPLPKGSKVPKGS
Trigger: AGATCCCTTTGGAACCTTAGATCCCTTCGGAAGTGGGTCCTTCAATAGTGCTGAAGGCTTTGCCGACTTCAGCCAGATGTCCAAGGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535753.6
ENST00000594975.5
ENST00000602022.5
CDS CCA 72 bp CATCAGAGGGCTGCTGGTGTCGTGAAATTTAGGCGGTaGCATGCTCAAATTCAGATTGCTCAAGGTAACTTC +
Preference number: 6 (lower is better)
Translates to: HQRAAGVVKFRR*HAQIQIAQGNF
Trigger: GAAGTTACCTTGAGCAATCTGAATTTGAGCATGCCACCGCCTAAATTTCACGACACCAGCAGCCCTCTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000248070.10
ENST00000455140.7
ENST00000535753.6
ENST00000592031.5
ENST00000594975.5
ENST00000597559.5
ENST00000597937.5
ENST00000602022.5
CDS CCA 72 bp CTTCCAGGTGAGCCTCTGATATTTCCGATAACAACCTaGGAGAGTTCGTGTAACATCTGGATGTGGAGGGAA +
Preference number: 6 (lower is better)
Translates to: LPGEPLIFPITT*ESSCNIWMWRE
Trigger: TTCCCTCCACATCCAGATGTTACACGAACTCTCCCAGGTTGTTATCGGAAATATCAGAGGCTCACCTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596151.1
CDS CCA 72 bp ATAACAACCTGGGAGAGTTCGTGTAACATCTGGATGTaGAGGGAAGGGCCGTTTCCAACATACCTTTGTAAC +
Preference number: 6 (lower is better)
Translates to: ITTWESSCNIWM*REGPFPTYLCN
Trigger: GTTACAAAGGTATGTTGGAAACGGCCCTTCCCTCCACATCCAGATGTTACACGAACTCTCCCAGGTTGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596151.1
CDS TCA 72 bp CCGTTTCCAACATACCTTTGTAACTGGGCAATCTCTTaGCTGATGTCATCAAGCTCCTTCACGCCAGTAAAC +
Preference number: 6 (lower is better)
Translates to: PFPTYLCNWAIS*LMSSSSFTPVN
Trigger: GTTTACTGGCGTGAAGGAGCTTGATGACATCAGTCAAGAGATTGCCCAGTTACAAAGGTATGTTGGAAACGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596151.1
CDS CCA 72 bp CATTCCTTTGTGGCTGGCACAGAATTAAATCATAGGTaGGTGGGTTTGAAATTTAGGCGGTGGCATGCTCAA +
Preference number: 6 (lower is better)
Translates to: HSFVAGTELNHR*VGLKFRRWHAQ
Trigger: TTGAGCATGCCACCGCCTAAATTTCAAACCCACCCACCTATGATTTAATTCTGTGCCAGCCACAAAGGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596037.5
CDS CCA 72 bp ATAGAAACCCTGTTTGTCCAAGAACCCTTTACCTTCTaGATCGGCCAAGTCCCATATCTTCCCAAGGATAAT +
Preference number: 6 (lower is better)
Translates to: IETLFVQEPFTF*IGQVPYLPKDN
Trigger: ATTATCCTTGGGAAGATATGGGACTTGGCCGATCCAGAAGGTAAAGGGTTCTTGGACAAACAGGGTTTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000248070.10
ENST00000455140.7
ENST00000535753.6
ENST00000594975.5
ENST00000596037.5
ENST00000597559.5
ENST00000597937.5
ENST00000602022.5
CDS CCA 72 bp AAATCCCATCAAATTTGGCCTTTTCTTCCACCTAGTTaGAAAGAAATAGCCCGAGTAAGTAGGAGAGCACAC +
Preference number: 6 (lower is better)
Translates to: KSHQIWPFLPPS*KEIARVSRRAH
Trigger: GTGTGCTCTCCTACTTACTCGGGCTATTTCTTTCCAACTAGGTGGAAGAAAAGGCCAAATTTGATGGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602009.5
CDS CCA 72 bp TGTATATACCTGTTTGTCCAAGAACCCTTTACCTTCTaGATCGGCCAAGTCCCATATCTTCCCAAGGATAAT +
Preference number: 6 (lower is better)
Translates to: CIYLFVQEPFTF*IGQVPYLPKDN
Trigger: ATTATCCTTGGGAAGATATGGGACTTGGCCGATCCAGAAGGTAAAGGGTTCTTGGACAAACAGGTATATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602151.1
CDS TCA 72 bp GATCTTAGAACAGTCTTGGCCCCTTGGTTTCCAAAGTaGACATATACCCTGAAGGAAATAACGTTATGGCAA +
Preference number: 6 (lower is better)
Translates to: DLRTVLAPWFPK*TYTLKEITLWQ
Trigger: TTGCCATAACGTTATTTCCTTCAGGGTATATGTTCACTTTGGAAACCAAGGGGCCAAGACTGTTCTAAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602009.5
CDS CCA 72 bp TTAAATCATAGGTGGGTGGGTTTGAAATTTAGGCGGTaGCATGCTCAAATTCAGATTGCTCAAGGTAACTTC +
Preference number: 6 (lower is better)
Translates to: LNHRWVGLKFRR*HAQIQIAQGNF
Trigger: GAAGTTACCTTGAGCAATCTGAATTTGAGCATGCCACCGCCTAAATTTCAAACCCACCCACCTATGATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596037.5
CDS CAA 90 bp AAGGGGTCTTCTGTCTGGAAAGGATCCGGATGCAACTCTTGCGTGTaGTTGCTAAATAACAAGGCTTTATTTTTGAAAGGATCATCCTTT +
Preference number: 6 (lower is better)
Translates to: KGSSVWKGSGCNSCV*LLNNKALFLKGSSF
Trigger: AAAGGATGATCCTTTCAAAAATAAAGCCTTGTTATTTAGCAACAACACGCAAGAGTTGCATCCGGATCCTTTCCAGACAGAAGACCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594975.5