RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPO (Homo sapiens)

Ensembl gene IDs: ENSG00000130427

Ensembl transcript IDs: ENST00000252723.3

Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATCCTGTCTTCATGGTTCCCACCACCCCGGTGTCAAGGGGGCTCTTaGCACCAAGGGAGTGCCCATGCCCGTGAGACCTGGAGAAGTCAC +
Preference number: 1 (lower is better)
Translates to: ILSSWFPPPRCQGGS*HQGSAHARETWRSH
Trigger: GTGACTTCTCCAGGTCTCACGGGCATGGGCACTCCCTTGGTGGCAAGAGCCCCCTTGACACCGGGGTGGTGGGAACCATGAAGACAGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR CCA 90 bp CAAGGGGGCTCTTGCCACCAAGGGAGTGCCCATGCCCGTGAGACCTaGAGAAGTCACAGCTTGCCACCTAAGTTATCCAGGTCATCCTGT +
Preference number: 1 (lower is better)
Translates to: QGGSCHQGSAHARET*RSHSLPPKLSRSSC
Trigger: ACAGGATGACCTGGATAACTTAGGTGGCAAGCTGTGACTTCTCCAGGTCTCACGGGCATGGGCACTCCCTTGGTGGCAAGAGCCCCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR TCA 90 bp GCGTCTTCCCAGCATGGCTCTGTCCCTGAGTTTAAAGCTGCTCTCTaGATGCTTCCTGCTCTGGGCCCTCAAGTTGGCCCTGTGACATCC +
Preference number: 1 (lower is better)
Translates to: ASSQHGSVPEFKAAL*MLPALGPQVGPVTS
Trigger: GGATGTCACAGGGCCAACTTGAGGGCCCAGAGCAGGAAGCATTCAGAGAGCAGCTTTAAACTCAGGGACAGAGCCATGCTGGGAAGACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR GCA 90 bp ACCAAGGGAGTGCCCATGCCCGTGAGACCTGGAGAAGTCACAGCTTaGCACCTAAGTTATCCAGGTCATCCTGTCCCTGATGGTAGGTGC +
Preference number: 1 (lower is better)
Translates to: TKGVPMPVRPGEVTA*HLSYPGHPVPDGRC
Trigger: GCACCTACCATCAGGGACAGGATGACCTGGATAACTTAGGTGGCAAGCTGTGACTTCTCCAGGTCTCACGGGCATGGGCACTCCCTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR TCA 90 bp CGCCTCCAAAGCGTGTCCTGGCATCAAATTTTGCAGGGTGCCGAGTaGGCTCAGGCGTCTTCCCAGCATGGCTCTGTCCCTGAGTTTAAA +
Preference number: 1 (lower is better)
Translates to: RLQSVSWHQILQGAE*AQASSQHGSVPEFK
Trigger: TTTAAACTCAGGGACAGAGCCATGCTGGGAAGACGCCTGAGCTCACTCGGCACCCTGCAAAATTTGATGCCAGGACACGCTTTGGAGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR CCA 90 bp CCTCAAGTTGGCCCTGTGACATCCTTAGATCTCAGAGTTGCTCTCTaGACAGTTCCTCTGGCCCCTGAGATGTCATTGCTGGCACTGGAG +
Preference number: 1 (lower is better)
Translates to: PQVGPVTSLDLRVAL*TVPLAPEMSLLALE
Trigger: CTCCAGTGCCAGCAATGACATCTCAGGGGCCAGAGGAACTGTCCAGAGAGCAACTCTGAGATCTAAGGATGTCACAGGGCCAACTTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR-3UTR TCA 90 bp GAGTTGCTCTCTGGACAGTTCCTCTGGCCCCTGAGATGTCATTGCTGGCACTGGAGGCTGGCGCTGAGCTaGGAGCCCCTCGACGGGGTT +
Preference number: 2 (lower is better)
Translates to: ELLSGQFLWPLRCHCWHWRLALS*EPLDGV
Trigger: AACCCCGTCGAGGGGCTCTCAGCTCAGCGCCAGCCT...CCAGTGCCAGCAATGACATCTCAGGGGCCAGAGGAACTGTCCAGAGAGCAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR-3UTR CCA 90 bp GAGTTGCTCTCTGGACAGTTCCTCTGGCCCCTGAGATGTCATTGCTGGCACTGGGACGGGGTTCAGGAGTaGCGGGGGAGGGTGTGGCAC +
Preference number: 2 (lower is better)
Translates to: ELLSGQFLWPLRCHCWHWDGVQE*RGRVWH
Trigger: GTGCCACACCCTCCCCCGCCACTCCTGAACCCCGTC...CCAGTGCCAGCAATGACATCTCAGGGGCCAGAGGAACTGTCCAGAGAGCAACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR-3UTR GCA 90 bp CACCCCGGTGTCAAGGGGGCTCTTGCCACCAAGGGAGTGCCCATGCCCGTGAGATCTCTGAATGCTTCCTaGTCTGGGCCCTCAAGTTGG +
Preference number: 2 (lower is better)
Translates to: HPGVKGALATKGVPMPVRSLNAS*SGPSSW
Trigger: CCAACTTGAGGGCCCAGAGCAGGAAGCATTCAGAGA...TCTCACGGGCATGGGCACTCCCTTGGTGGCAAGAGCCCCCTTGACACCGGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR-3UTR CCA 90 bp CCCATGAGAGCCAGAGGCCAGCCCCCATCCTGTCTTCATGGTTCCCACCACCCCCATGCCCGTGAGACCTaGAGAAGTCACAGCTTGCCA +
Preference number: 2 (lower is better)
Translates to: PMRARGQPPSCLHGSHHPHARET*RSHSLP
Trigger: TGGCAAGCTGTGACTTCTCCAGGTCTCACGGGCATG...GGGGTGGTGGGAACCATGAAGACAGGATGGGGGCTGGCCTCTGGCTCTCATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR-3UTR TCA 90 bp AATGAGGTTGAAGAATACACAAAACTTGGACCCCATGAGAGCCAGAGGCCAGCCGGGACAGGCTGGCGCTaGGCTGAGAGCCCCTCGACG +
Preference number: 2 (lower is better)
Translates to: NEVEEYTKLGPHESQRPAGTGWR*AESPST
Trigger: CGTCGAGGGGCTCTCAGCTCAGCGCCAGCCTGTCCC...GGCTGGCCTCTGGCTCTCATGGGGTCCAAGTTTTGTGTATTCTTCAACCTCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR-3UTR GCA 90 bp ATGAGAGCCAGAGGCCAGCCCCCATCCTGTCTTCATGGTTCCCACCACCCCGGTCCCCTGAGATGTCATTaGTGGCACTGGAGTGTCCAT +
Preference number: 2 (lower is better)
Translates to: MRARGQPPSCLHGSHHPGPLRCH*WHWSVH
Trigger: ATGGACACTCCAGTGCCAGCAATGACATCTCAGGGG...ACCGGGGTGGTGGGAACCATGAAGACAGGATGGGGGCTGGCCTCTGGCTCTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR-3UTR CCA 90 bp ATGAGAGCCAGAGGCCAGCCCCCATCCTGTCTTCATGGTTCCCACCACCCCGGTCTGAGATGTCATTGCTaGCACTGGAGTGTCCATGGG +
Preference number: 2 (lower is better)
Translates to: MRARGQPPSCLHGSHHPGLRCHC*HWSVHG
Trigger: CCCATGGACACTCCAGTGCCAGCAATGACATCTCAG...ACCGGGGTGGTGGGAACCATGAAGACAGGATGGGGGCTGGCCTCTGGCTCTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR-3UTR CCA 90 bp CACCCCGGTGTCAAGGGGGCTCTTGCCACCAAGGGAGTGCCCATGCCCGTGAGACTCCAAAGCGTGTCCTaGCATCAAATTTTGCAGGGT +
Preference number: 2 (lower is better)
Translates to: HPGVKGALATKGVPMPVRLQSVS*HQILQG
Trigger: ACCCTGCAAAATTTGATGCCAGGACACGCTTTGGAG...TCTCACGGGCATGGGCACTCCCTTGGTGGCAAGAGCCCCCTTGACACCGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR-3UTR GCA 90 bp CACCAAGGGAGTGCCCATGCCCGTGAGACCTGGAGAAGTCACAGCTTGCCACCTTCAAATTTTGCAGGGTaGCGAGTGAGCTCAGGCGTC +
Preference number: 2 (lower is better)
Translates to: HQGSAHARETWRSHSLPPSNFAG*RVSSGV
Trigger: GACGCCTGAGCTCACTCGGCACCCTGCAAAATTTGA...AGGTGGCAAGCTGTGACTTCTCCAGGTCTCACGGGCATGGGCACTCCCTTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR-3UTR TCA 90 bp ATCCTGTCTTCATGGTTCCCACCACCCCGGTGTCAAGGGGGCTCTTGCCACCAATTTAAAGCTGCTCTCTaGATGCTTCCTGCTCTGGGC +
Preference number: 2 (lower is better)
Translates to: ILSSWFPPPRCQGGSCHQFKAAL*MLPALG
Trigger: GCCCAGAGCAGGAAGCATTCAGAGAGCAGCTTTAAA...TTGGTGGCAAGAGCCCCCTTGACACCGGGGTGGTGGGAACCATGAAGACAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR-3UTR CCA 90 bp AAAACAGGTAAATCGCCTCCAAAGCGTGTCCTGGCATCAAATTTTGCAGGGTGCGCACTGGAGTGTCCATaGGACAGGCTGGCGCTGAGC +
Preference number: 2 (lower is better)
Translates to: KTGKSPPKRVLASNFAGCALECP*DRLALS
Trigger: GCTCAGCGCCAGCCTGTCCCATGGACACTCCAGTGC...GCACCCTGCAAAATTTGATGCCAGGACACGCTTTGGAGGCGATTTACCTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR-3UTR CCA 90 bp AGTGCCCATGCCCGTGAGACCTGGAGAAGTCACAGCTTGCCACCTAAGTTATCCTCTGGGCCCTCAAGTTaGCCCTGTGACATCCTTAGA +
Preference number: 2 (lower is better)
Translates to: SAHARETWRSHSLPPKLSSGPSS*PCDILR
Trigger: TCTAAGGATGTCACAGGGCCAACTTGAGGGCCCAGA...GGATAACTTAGGTGGCAAGCTGTGACTTCTCCAGGTCTCACGGGCATGGGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR-3UTR TCA 90 bp AGGCGTCTTCCCAGCATGGCTCTGTCCCTGAGTTTAAAGCTGCTCTCTGAATGCCACAAGCAATGTTGGTaGGGGAGGTGGTGGATATGC +
Preference number: 2 (lower is better)
Translates to: RRLPSMALSLSLKLLSECHKQCW*GRWWIC
Trigger: GCATATCCACCACCTCCCTCACCAACATTGCTTGTG...GCATTCAGAGAGCAGCTTTAAACTCAGGGACAGAGCCATGCTGGGAAGACGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR-3UTR CCA 90 bp AAAACAGGTAAATCGCCTCCAAAGCGTGTCCTGGCATCAAATTTTGCAGGGTGCTCTGGACAGTTCCTCTaGCCCCTGAGATGTCATTGC +
Preference number: 2 (lower is better)
Translates to: KTGKSPPKRVLASNFAGCSGQFL*PLRCHC
Trigger: GCAATGACATCTCAGGGGCCAGAGGAACTGTCCAGA...GCACCCTGCAAAATTTGATGCCAGGACACGCTTTGGAGGCGATTTACCTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR-3UTR CCA 90 bp TCAGTTCTTGTCAATGAGGTTGAAGAATACACAAAACTTGGACCCCATGAGAGCCCCATCCTGTCTTCATaGTTCCCACCACCCCGGTGT +
Preference number: 2 (lower is better)
Translates to: SVLVNEVEEYTKLGPHESPILSS*FPPPRC
Trigger: ACACCGGGGTGGTGGGAACCATGAAGACAGGATGGG...GCTCTCATGGGGTCCAAGTTTTGTGTATTCTTCAACCTCATTGACAAGAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR-3UTR GCA 90 bp AATGAGGTTGAAGAATACACAAAACTTGGACCCCATGAGAGCCAGAGGCCAGCCCTTAGATCTCAGAGTTaGTCTCTGGACAGTTCCTCT +
Preference number: 2 (lower is better)
Translates to: NEVEEYTKLGPHESQRPALRSQS*SLDSSS
Trigger: AGAGGAACTGTCCAGAGAGCAACTCTGAGATCTAAG...GGCTGGCCTCTGGCTCTCATGGGGTCCAAGTTTTGTGTATTCTTCAACCTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR TCA 72 bp GCACTGGAGTGTCCATGGGACAGGCTGGCGCTGAGCTaGGAGCCCCTCGACGGGGTTCAGGAGTGGCGGGGG +
Preference number: 3 (lower is better)
Translates to: ALECPWDRLALS*EPLDGVQEWRG
Trigger: CCCCCGCCACTCCTGAACCCCGTCGAGGGGCTCTCAGCTCAGCGCCAGCCTGTCCCATGGACACTCCAGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR GCA 72 bp TCATGGTTCCCACCACCCCGGTGTCAAGGGGGCTCTTaGCACCAAGGGAGTGCCCATGCCCGTGAGACCTGG +
Preference number: 3 (lower is better)
Translates to: SWFPPPRCQGGS*HQGSAHARETW
Trigger: CCAGGTCTCACGGGCATGGGCACTCCCTTGGTGGCAAGAGCCCCCTTGACACCGGGGTGGTGGGAACCATGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR-3UTR CAA 90 bp CCCATGAGAGCCAGAGGCCAGCCCCCATCCTGTCTTCATGGTTCCCACCACCCCGTGTCAAGGGGGCTCTaGCCACCAAGGGAGTGCCCA +
Preference number: 3 (lower is better)
Translates to: PMRARGQPPSCLHGSHHPVSRGL*PPRECP
Trigger: TGGGCACTCCCTTGGTGGCAAGAGCCCCCTTGACAC...GGGGTGGTGGGAACCATGAAGACAGGATGGGGGCTGGCCTCTGGCTCTCATGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR TCA 72 bp GAGTGGCGGGGGAGGGTGTGGCACAAGCAATGTTGGTaGGGGAGGTGGTGGATATGCCCAGGTGGACACACC +
Preference number: 3 (lower is better)
Translates to: EWRGRVWHKQCW*GRWWICPGGHT
Trigger: GGTGTGTCCACCTGGGCATATCCACCACCTCCCTCACCAACATTGCTTGTGCCACACCCTCCCCCGCCACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR GCA 72 bp CTCTCTGGACAGTTCCTCTGGCCCCTGAGATGTCATTaGTGGCACTGGAGTGTCCATGGGACAGGCTGGCGC +
Preference number: 3 (lower is better)
Translates to: LSGQFLWPLRCH*WHWSVHGTGWR
Trigger: GCGCCAGCCTGTCCCATGGACACTCCAGTGCCAGCAATGACATCTCAGGGGCCAGAGGAACTGTCCAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR TCA 72 bp AGCGTGTCCTGGCATCAAATTTTGCAGGGTGCCGAGTaGGCTCAGGCGTCTTCCCAGCATGGCTCTGTCCCT +
Preference number: 3 (lower is better)
Translates to: SVSWHQILQGAE*AQASSQHGSVP
Trigger: AGGGACAGAGCCATGCTGGGAAGACGCCTGAGCTCACTCGGCACCCTGCAAAATTTGATGCCAGGACACGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR-3UTR CAA 90 bp TCCCTGATGGTAGGTGCGAAAACAGGTAAATCGCCTCCAAAGCGTGTCCTGGCAGCCCCTGAGATGTCATaGCTGGCACTGGAGTGTCCA +
Preference number: 3 (lower is better)
Translates to: SLMVGAKTGKSPPKRVLAAPEMS*LALECP
Trigger: TGGACACTCCAGTGCCAGCAATGACATCTCAGGGGC...TGCCAGGACACGCTTTGGAGGCGATTTACCTGTTTTCGCACCTACCATCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR TCA 72 bp CAGCATGGCTCTGTCCCTGAGTTTAAAGCTGCTCTCTaGATGCTTCCTGCTCTGGGCCCTCAAGTTGGCCCT +
Preference number: 3 (lower is better)
Translates to: QHGSVPEFKAAL*MLPALGPQVGP
Trigger: AGGGCCAACTTGAGGGCCCAGAGCAGGAAGCATTCAGAGAGCAGCTTTAAACTCAGGGACAGAGCCATGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR GCA 72 bp GTGCCCATGCCCGTGAGACCTGGAGAAGTCACAGCTTaGCACCTAAGTTATCCAGGTCATCCTGTCCCTGAT +
Preference number: 3 (lower is better)
Translates to: VPMPVRPGEVTA*HLSYPGHPVPD
Trigger: ATCAGGGACAGGATGACCTGGATAACTTAGGTGGCAAGCTGTGACTTCTCCAGGTCTCACGGGCATGGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR CCA 72 bp GGCCCTGTGACATCCTTAGATCTCAGAGTTGCTCTCTaGACAGTTCCTCTGGCCCCTGAGATGTCATTGCTG +
Preference number: 3 (lower is better)
Translates to: GPVTSLDLRVAL*TVPLAPEMSLL
Trigger: CAGCAATGACATCTCAGGGGCCAGAGGAACTGTCCAGAGAGCAACTCTGAGATCTAAGGATGTCACAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR CCA 72 bp TGCTCTCTGAATGCTTCCTGCTCTGGGCCCTCAAGTTaGCCCTGTGACATCCTTAGATCTCAGAGTTGCTCT +
Preference number: 3 (lower is better)
Translates to: CSLNASCSGPSS*PCDILRSQSCS
Trigger: AGAGCAACTCTGAGATCTAAGGATGTCACAGGGCCAACTTGAGGGCCCAGAGCAGGAAGCATTCAGAGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp CCCATGAGAGCCAGAGGCCAGCCCCCATCCTGTCTTCATGGTTCCCACCACCCCGGTCCCTCAGCGACCTaGGGCGCGCCGGGTGACCAC +
Preference number: 4 (lower is better)
Translates to: PMRARGQPPSCLHGSHHPGPSAT*GAPGDH
Trigger: GTGGTCACCCGGCGCGCCCCAGGTCGCTGAGGGACC...GGGGTGGTGGGAACCATGAAGACAGGATGGGGGCTGGCCTCTGGCTCTCATGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp AGAGCCAGAGGCCAGCCCCCATCCTGTCTTCATGGTTCCCACCACCCCGGTGTCGTGCGCGGGTGGGGGTaGGGGAGAGGCTGTGTGCGT +
Preference number: 4 (lower is better)
Translates to: RARGQPPSCLHGSHHPGVVRGWG*GRGCVR
Trigger: ACGCACACAGCCTCTCCCCCACCCCCACCCGCGCAC...GACACCGGGGTGGTGGGAACCATGAAGACAGGATGGGGGCTGGCCTCTGGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp TTCATGGTTCCCACCACCCCGGTGTCAAGGGGGCTCTTGCCACCAAGGGAGTGCCCCCATCTCCGCGCCTaGCCGGGGTCCCTCAGCGAC +
Preference number: 4 (lower is better)
Translates to: FMVPTTPVSRGLLPPRECPHLRA*PGSLSD
Trigger: GTCGCTGAGGGACCCCGGCCAGGCGCGGAGATGGGG...GCACTCCCTTGGTGGCAAGAGCCCCCTTGACACCGGGGTGGTGGGAACCATGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR GCA 90 bp CGACGGGGTTCAGGAGTGGCGGGGGAGGGTGTGGCACAAGCAATGTTGGTGAGGGGGAGTGCAGCCGGTTaGGCACCCTTGGGACTGGCG +
Preference number: 4 (lower is better)
Translates to: RRGSGVAGEGVAQAMLVRGSAAG*APLGLA
Trigger: CGCCAGTCCCAAGGGTGCGCAACCGGCTGCACTCCC...CCTCACCAACATTGCTTGTGCCACACCCTCCCCCGCCACTCCTGAACCCCGTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR GCA 90 bp AAGGGGGCTCTTGCCACCAAGGGAGTGCCCATGCCCGTGAGACCTGGAGAAGTCGGGCGTGAGCGGGGCTaGTGCAGACGTGCGTGTGGG +
Preference number: 4 (lower is better)
Translates to: KGALATKGVPMPVRPGEVGRERG*CRRACG
Trigger: CCCACACGCACGTCTGCAGCAGCCCCGCTCACGCCC...GACTTCTCCAGGTCTCACGGGCATGGGCACTCCCTTGGTGGCAAGAGCCCCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR TCA 90 bp AGTGGCGGGGGAGGGTGTGGCACAAGCAATGTTGGTGAGGGAGGTGGTGGATATGCAGGACGCCTGGGTTaGGGCTCGCCGGGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: SGGGGCGTSNVGEGGGGYAGRLG*GSPGRE
Trigger: CTCACGCCCCGGCGAGCCTCAACCCAGGCGTCCTGC...ATATCCACCACCTCCCTCACCAACATTGCTTGTGCCACACCCTCCCCCGCCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR TCA 90 bp AAGGGGGCTCTTGCCACCAAGGGAGTGCCCATGCCCGTGAGACCTGGAGAAGTCAGGCTGGCGCTGAGCTaGGAGCCCCTCGACGGGGTT +
Preference number: 4 (lower is better)
Translates to: KGALATKGVPMPVRPGEVRLALS*EPLDGV
Trigger: AACCCCGTCGAGGGGCTCTCAGCTCAGCGCCAGCCT...GACTTCTCCAGGTCTCACGGGCATGGGCACTCCCTTGGTGGCAAGAGCCCCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR GCA 90 bp CCCACCACCCCGGTGTCAAGGGGGCTCTTGCCACCAAGGGAGTGCCCATGCCCGTGTCAAGGGGGCTCTTaGCACCAAGGGAGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: PTTPVSRGLLPPRECPCPCQGGS*HQGSAH
Trigger: ATGGGCACTCCCTTGGTGGCAAGAGCCCCCTTGACA...CGGGCATGGGCACTCCCTTGGTGGCAAGAGCCCCCTTGACACCGGGGTGGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp CGACGGGGTTCAGGAGTGGCGGGGGAGGGTGTGGCACAAGCAATGTTGGTGAGGGCGCACCCTTGGGACTaGCGGAGCGTGCTATCTGGG +
Preference number: 4 (lower is better)
Translates to: RRGSGVAGEGVAQAMLVRAHPWD*RSVLSG
Trigger: CCCAGATAGCACGCTCCGCCAGTCCCAAGGGTGCGC...CCTCACCAACATTGCTTGTGCCACACCCTCCCCCGCCACTCCTGAACCCCGTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp AGTGGCGGGGGAGGGTGTGGCACAAGCAATGTTGGTGAGGGAGGTGGTGGATATCAGGGGCAGGACGCCTaGGTTGAGGCTCGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: SGGGGCGTSNVGEGGGGYQGQDA*VEARRG
Trigger: GCCCCGGCGAGCCTCAACCCAGGCGTCCTGCCCCTG...ATATCCACCACCTCCCTCACCAACATTGCTTGTGCCACACCCTCCCCCGCCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp GGGGAGGGTGTGGCACAAGCAATGTTGGTGAGGGAGGTGGTGGATATGCCCAGGGGGACTCTGCGGCTCTaGCCGGGGGTCGGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: GEGVAQAMLVREVVDMPRGTLRL*PGVGAV
Trigger: AACAGCCCCGACCCCCGGCCAGAGCCGCAGAGTCCC...CCTGGGCATATCCACCACCTCCCTCACCAACATTGCTTGTGCCACACCCTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp GGGGAGGGTGTGGCACAAGCAATGTTGGTGAGGGAGGTGGTGGATATGCCCAGGTGGGGCGCCCAGGACTaGGAGGCCCAGAGGGAGCGA +
Preference number: 4 (lower is better)
Translates to: GEGVAQAMLVREVVDMPRWGAQD*EAQRER
Trigger: TCGCTCCCTCTGGGCCTCCCAGTCCTGGGCGCCCCA...CCTGGGCATATCCACCACCTCCCTCACCAACATTGCTTGTGCCACACCCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp CCCATGAGAGCCAGAGGCCAGCCCCCATCCTGTCTTCATGGTTCCCACCACCCCGTCACAGATGAGGCGTaGTGGGGCGCCCAGGACTGG +
Preference number: 4 (lower is better)
Translates to: PMRARGQPPSCLHGSHHPVTDEA*WGAQDW
Trigger: CCAGTCCTGGGCGCCCCACCACGCCTCATCTGTGAC...GGGGTGGTGGGAACCATGAAGACAGGATGGGGGCTGGCCTCTGGCTCTCATGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR TCA 90 bp GGGGAGGGTGTGGCACAAGCAATGTTGGTGAGGGAGGTGGTGGATATGCCCAGGCTCGGCTGTCACAGATaGGGCGTGGTGGGGCGCCCA +
Preference number: 4 (lower is better)
Translates to: GEGVAQAMLVREVVDMPRLGCHR*GVVGRP
Trigger: TGGGCGCCCCACCACGCCTCATCTGTGACAGCCGAG...CCTGGGCATATCCACCACCTCCCTCACCAACATTGCTTGTGCCACACCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp GCACAAGCAATGTTGGTGAGGGAGGTGGTGGATATGCCCAGGTGGACACACCTGAGCGAGCGGCCGGGGTaGCCCAGGGACTCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: AQAMLVREVVDMPRWTHLSERPG*PRDSAA
Trigger: AGCCGCAGAGTCCCTGGGCCACCCCGGCCGCTCGCT...CAGGTGTGTCCACCTGGGCATATCCACCACCTCCCTCACCAACATTGCTTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp CGACGGGGTTCAGGAGTGGCGGGGGAGGGTGTGGCACAAGCAATGTTGGTGAGGTTGACCAACAGGGCCTaGCCCCGCAGGACAGCTTCC +
Preference number: 4 (lower is better)
Translates to: RRGSGVAGEGVAQAMLVRLTNRA*PRRTAS
Trigger: GGAAGCTGTCCTGCGGGGCCAGGCCCTGTTGGTCAA...CCTCACCAACATTGCTTGTGCCACACCCTCCCCCGCCACTCCTGAACCCCGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp CACCAAGGGAGTGCCCATGCCCGTGAGACCTGGAGAAGTCACAGCTTGCCACCTGACGGGGTTCAGGAGTaGCGGGGGAGGGTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: HQGSAHARETWRSHSLPPDGVQE*RGRVWH
Trigger: GTGCCACACCCTCCCCCGCCACTCCTGAACCCCGTC...AGGTGGCAAGCTGTGACTTCTCCAGGTCTCACGGGCATGGGCACTCCCTTGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR TCA 90 bp CATGAGAGCCAGAGGCCAGCCCCCATCCTGTCTTCATGGTTCCCACCACCCCGGGAGTGCCCATGCCCGTaGGACCTGGAGAAGTCACAG +
Preference number: 4 (lower is better)
Translates to: HESQRPAPILSSWFPPPRECPCP*DLEKSQ
Trigger: CTGTGACTTCTCCAGGTCTCACGGGCATGGGCACTC...CCGGGGTGGTGGGAACCATGAAGACAGGATGGGGGCTGGCCTCTGGCTCTCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR TCA 90 bp GAGCCAGAGGCCAGCCCCCATCCTGTCTTCATGGTTCCCACCACCCCGGTGTCAAAAACTTGGACCCCATaGGAGCCAGAGGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: EPEASPHPVFMVPTTPVSKTWTP*EPEASP
Trigger: GGGGCTGGCCTCTGGCTCTCATGGGGTCCAAGTTTT...TGACACCGGGGTGGTGGGAACCATGAAGACAGGATGGGGGCTGGCCTCTGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR GCA 90 bp GAGCCAGAGGCCAGCCCCCATCCTGTCTTCATGGTTCCCACCACCCCGGTGTCAGTCGGGGCTGTTATCTaGATGTGTGCGTGCGCGGGT +
Preference number: 4 (lower is better)
Translates to: EPEASPHPVFMVPTTPVSVGAVI*MCACAG
Trigger: ACCCGCGCACGCACACATGCAGATAACAGCCCCGAC...TGACACCGGGGTGGTGGGAACCATGAAGACAGGATGGGGGCTGGCCTCTGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp GGGGGAGGGTGTGGCACAAGCAATGTTGGTGAGGGAGGTGGTGGATATGCCCAGCCGGTTGCGCACCCTTaGGACTGGCGGAGCGTGCTA +
Preference number: 4 (lower is better)
Translates to: GGGCGTSNVGEGGGGYAQPVAHP*DWRSVL
Trigger: TAGCACGCTCCGCCAGTCCCAAGGGTGCGCAACCGG...CTGGGCATATCCACCACCTCCCTCACCAACATTGCTTGTGCCACACCCTCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp GAGTTGCTCTCTGGACAGTTCCTCTGGCCCCTGAGATGTCATTGCTGGCACTGGCGTGCGTGTGGGTCATaGGGGCTGCTCCCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: ELLSGQFLWPLRCHCWHWRACGS*GLLPGP
Trigger: AGGGCCCGGGAGCAGCCCCCATGACCCACACGCACG...CCAGTGCCAGCAATGACATCTCAGGGGCCAGAGGAACTGTCCAGAGAGCAACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp CCCACCACCCCGGTGTCAAGGGGGCTCTTGCCACCAAGGGAGTGCCCATGCCCGGTGGATATGCCCAGGTaGACACACCTGGTCATCTGT +
Preference number: 4 (lower is better)
Translates to: PTTPVSRGLLPPRECPCPVDMPR*THLVIC
Trigger: ACAGATGACCAGGTGTGTCCACCTGGGCATATCCAC...CGGGCATGGGCACTCCCTTGGTGGCAAGAGCCCCCTTGACACCGGGGTGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR TCA 90 bp CCCATGAGAGCCAGAGGCCAGCCCCCATCCTGTCTTCATGGTTCCCACCACCCCGGCTGCGAAGGCCACTaGCGGCTTTATCCACATGCA +
Preference number: 4 (lower is better)
Translates to: PMRARGQPPSCLHGSHHPGCEGH*RLYPHA
Trigger: TGCATGTGGATAAAGCCGTCAGTGGCCTTCGCAGCC...GGGGTGGTGGGAACCATGAAGACAGGATGGGGGCTGGCCTCTGGCTCTCATGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR TCA 90 bp GAGGTTGAAGAATACACAAAACTTGGACCCCATGAGAGCCAGAGGCCAGCCCCCGGGACAGGCTGGCGCTaGGCTGAGAGCCCCTCGACG +
Preference number: 4 (lower is better)
Translates to: EVEEYTKLGPHESQRPAPGTGWR*AESPST
Trigger: CGTCGAGGGGCTCTCAGCTCAGCGCCAGCCTGTCCC...GGGGGCTGGCCTCTGGCTCTCATGGGGTCCAAGTTTTGTGTATTCTTCAACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR GCA 90 bp TCTCTGAATGCTTCCTGCTCTGGGCCCTCAAGTTGGCCCTGTGACATCCTTAGAGTGGGTCATGGGGGCTaGTCCCGGGCCCTGGGTCGC +
Preference number: 4 (lower is better)
Translates to: SLNASCSGPSSWPCDILRVGHGG*SRALGR
Trigger: GCGACCCAGGGCCCGGGAGCAGCCCCCATGACCCAC...TCTAAGGATGTCACAGGGCCAACTTGAGGGCCCAGAGCAGGAAGCATTCAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR GCA 90 bp CATGAGAGCCAGAGGCCAGCCCCCATCCTGTCTTCATGGTTCCCACCACCCCGGACGGCTTTATCCACATaGAGCTGCAGGGGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: HESQRPAPILSSWFPPPRTALST*SCRGSH
Trigger: GTGGGAGCCCCTGCAGCTGCATGTGGATAAAGCCGT...CCGGGGTGGTGGGAACCATGAAGACAGGATGGGGGCTGGCCTCTGGCTCTCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp TGCAGGGTGCCGAGTGAGCTCAGGCGTCTTCCCAGCATGGCTCTGTCCCTGAGTAGGGGCTCCCACGGCTaGGAAGAGTTGACCAACAGG +
Preference number: 4 (lower is better)
Translates to: CRVPSELRRLPSMALSLSRGSHG*EELTNR
Trigger: CCTGTTGGTCAACTCTTCCCAGCCGTGGGAGCCCCT...ACTCAGGGACAGAGCCATGCTGGGAAGACGCCTGAGCTCACTCGGCACCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp AAGGGGGCTCTTGCCACCAAGGGAGTGCCCATGCCCGTGAGACCTGGAGAAGTCGAGATGGCTTCCTTCTaGGCTCCCAGAGCCCGAAGC +
Preference number: 4 (lower is better)
Translates to: KGALATKGVPMPVRPGEVEMASF*APRARS
Trigger: GCTTCGGGCTCTGGGAGCCCAGAAGGAAGCCATCTC...GACTTCTCCAGGTCTCACGGGCATGGGCACTCCCTTGGTGGCAAGAGCCCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR GCA 90 bp CATGCCCGTGAGACCTGGAGAAGTCACAGCTTGCCACCTAAGTTATCCAGGTCAGGGGGAGAGGCTGTGTaGGTGAGGGGTCGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: HARETWRSHSLPPKLSRSGGEAV*VRGRQG
Trigger: CCCCTGGCGACCCCTCACGCACACAGCCTCTCCCCC...TGACCTGGATAACTTAGGTGGCAAGCTGTGACTTCTCCAGGTCTCACGGGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR GCA 90 bp AAGGGGGCTCTTGCCACCAAGGGAGTGCCCATGCCCGTGAGACCTGGAGAAGTCACTTCTACGGCCTGCTaGCCGACCTCCATCCTCTTC +
Preference number: 4 (lower is better)
Translates to: KGALATKGVPMPVRPGEVTSTAC*PTSILF
Trigger: GAAGAGGATGGAGGTCGGGCAGCAGGCCGTAGAAGT...GACTTCTCCAGGTCTCACGGGCATGGGCACTCCCTTGGTGGCAAGAGCCCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR GCA 90 bp GAGTTGCTCTCTGGACAGTTCCTCTGGCCCCTGAGATGTCATTGCTGGCACTGGAGCAGGGCCAGGCCCTaGCAGACTTCTACGGCCTGC +
Preference number: 4 (lower is better)
Translates to: ELLSGQFLWPLRCHCWHWSRARP*QTSTAC
Trigger: GCAGGCCGTAGAAGTCTGGCAGGGCCTGGCCCTGCT...CCAGTGCCAGCAATGACATCTCAGGGGCCAGAGGAACTGTCCAGAGAGCAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp TGTCCTGGCATCAAATTTTGCAGGGTGCCGAGTGAGCTCAGGCGTCTTCCCAGCCTGCAGACGTGCGTGTaGGTCATGGGGGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: CPGIKFCRVPSELRRLPSLQTCV*VMGAAP
Trigger: GGGAGCAGCCCCCATGACCCACACGCACGTCTGCAG...GCTGGGAAGACGCCTGAGCTCACTCGGCACCCTGCAAAATTTGATGCCAGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp CCCACCACCCCGGTGTCAAGGGGGCTCTTGCCACCAAGGGAGTGCCCATGCCCGCTCCAAAGCGTGTCCTaGCATCAAATTTTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: PTTPVSRGLLPPRECPCPLQSVS*HQILQG
Trigger: ACCCTGCAAAATTTGATGCCAGGACACGCTTTGGAG...CGGGCATGGGCACTCCCTTGGTGGCAAGAGCCCCCTTGACACCGGGGTGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp TGCAGGGTGCCGAGTGAGCTCAGGCGTCTTCCCAGCATGGCTCTGTCCCTGAGTCCCATCCTGTCTTCATaGTTCCCACCACCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: CRVPSELRRLPSMALSLSPILSS*FPPPRC
Trigger: ACACCGGGGTGGTGGGAACCATGAAGACAGGATGGG...ACTCAGGGACAGAGCCATGCTGGGAAGACGCCTGAGCTCACTCGGCACCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252723.3
3UTR CAA 72 bp GCTCTCTGGACAGTTCCTCTGGCCCCTGAGATGTCATaGCTGGCACTGGAGTGTCCATGGGACAGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: ALWTVPLAPEMS*LALECPWDRLA
Trigger: CGCCAGCCTGTCCCATGGACACTCCAGTGCCAGCAATGACATCTCAGGGGCCAGAGGAACTGTCCAGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR GCA 90 bp TCTCTGAATGCTTCCTGCTCTGGGCCCTCAAGTTGGCCCTGTGACATCCTTAGAGTCGCGGGAGGGGAGTaGAGCCGGTTGCGCACCCTT +
Preference number: 4 (lower is better)
Translates to: SLNASCSGPSSWPCDILRVAGGE*SRLRTL
Trigger: AAGGGTGCGCAACCGGCTGCACTCCCCTCCCGCGAC...TCTAAGGATGTCACAGGGCCAACTTGAGGGCCCAGAGCAGGAAGCATTCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp AAGGGGGCTCTTGCCACCAAGGGAGTGCCCATGCCCGTGAGACCTGGAGAAGTCTGTCATTGCTGGCACTaGAGTGTCCATGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: KGALATKGVPMPVRPGEVCHCWH*SVHGTG
Trigger: GCCTGTCCCATGGACACTCCAGTGCCAGCAATGACA...GACTTCTCCAGGTCTCACGGGCATGGGCACTCCCTTGGTGGCAAGAGCCCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp CATGAGAGCCAGAGGCCAGCCCCCATCCTGTCTTCATGGTTCCCACCACCCCGGCTGAGATGTCATTGCTaGCACTGGAGTGTCCATGGG +
Preference number: 4 (lower is better)
Translates to: HESQRPAPILSSWFPPPRLRCHC*HWSVHG
Trigger: CCCATGGACACTCCAGTGCCAGCAATGACATCTCAG...CCGGGGTGGTGGGAACCATGAAGACAGGATGGGGGCTGGCCTCTGGCTCTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp GAGCCAGAGGCCAGCCCCCATCCTGTCTTCATGGTTCCCACCACCCCGGTGTCATCTGGACAGTTCCTCTaGCCCCTGAGATGTCATTGC +
Preference number: 4 (lower is better)
Translates to: EPEASPHPVFMVPTTPVSSGQFL*PLRCHC
Trigger: GCAATGACATCTCAGGGGCCAGAGGAACTGTCCAGA...TGACACCGGGGTGGTGGGAACCATGAAGACAGGATGGGGGCTGGCCTCTGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp AGAGCCAGAGGCCAGCCCCCATCCTGTCTTCATGGTTCCCACCACCCCGGTGTCTCTGGGCCCTCAAGTTaGCCCTGTGACATCCTTAGA +
Preference number: 4 (lower is better)
Translates to: RARGQPPSCLHGSHHPGVSGPSS*PCDILR
Trigger: TCTAAGGATGTCACAGGGCCAACTTGAGGGCCCAGA...GACACCGGGGTGGTGGGAACCATGAAGACAGGATGGGGGCTGGCCTCTGGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR TCA 90 bp AGGCGTCTTCCCAGCATGGCTCTGTCCCTGAGTTTAAAGCTGCTCTCTGAATGCTCGGAGTGGAGCAGCTaGGGCCGCATCTGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RRLPSMALSLSLKLLSECSEWSS*GRIWRG
Trigger: TCCCCTCCAGATGCGGCCTCAGCTGCTCCACTCCGA...GCATTCAGAGAGCAGCTTTAAACTCAGGGACAGAGCCATGCTGGGAAGACGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR TCA 90 bp TTCATGGTTCCCACCACCCCGGTGTCAAGGGGGCTCTTGCCACCAAGGGAGTGCGGAAAGTGTCAGCAGTaGTTGTTCGGAGTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: FMVPTTPVSRGLLPPRECGKCQQ*LFGVEQ
Trigger: CTGCTCCACTCCGAACAATCACTGCTGACACTTTCC...GCACTCCCTTGGTGGCAAGAGCCCCCTTGACACCGGGGTGGTGGGAACCATGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR GCA 90 bp GAGTTGCTCTCTGGACAGTTCCTCTGGCCCCTGAGATGTCATTGCTGGCACTGGCAGACTTCTACGGCCTaGTGCCCGACCTCCATCCTC +
Preference number: 4 (lower is better)
Translates to: ELLSGQFLWPLRCHCWHWQTSTA*CPTSIL
Trigger: GAGGATGGAGGTCGGGCAGCAGGCCGTAGAAGTCTG...CCAGTGCCAGCAATGACATCTCAGGGGCCAGAGGAACTGTCCAGAGAGCAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR GCA 90 bp TTCATGGTTCCCACCACCCCGGTGTCAAGGGGGCTCTTGCCACCAAGGGAGTGCTCAAATTTTGCAGGGTaGCGAGTGAGCTCAGGCGTC +
Preference number: 4 (lower is better)
Translates to: FMVPTTPVSRGLLPPRECSNFAG*RVSSGV
Trigger: GACGCCTGAGCTCACTCGGCACCCTGCAAAATTTGA...GCACTCCCTTGGTGGCAAGAGCCCCCTTGACACCGGGGTGGTGGGAACCATGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp AGGCGTCTTCCCAGCATGGCTCTGTCCCTGAGTTTAAAGCTGCTCTCTGAATGCACAGATGAGGCGTGGTaGGGCGCCCAGGACTGGGAG +
Preference number: 4 (lower is better)
Translates to: RRLPSMALSLSLKLLSECTDEAW*GAQDWE
Trigger: CTCCCAGTCCTGGGCGCCCCACCACGCCTCATCTGT...GCATTCAGAGAGCAGCTTTAAACTCAGGGACAGAGCCATGCTGGGAAGACGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR TCA 90 bp GGGGGAGGGTGTGGCACAAGCAATGTTGGTGAGGGAGGTGGTGGATATGCCCAGCACAAGCAATGTTGGTaGGGGAGGTGGTGGATATGC +
Preference number: 4 (lower is better)
Translates to: GGGCGTSNVGEGGGGYAQHKQCW*GRWWIC
Trigger: GCATATCCACCACCTCCCTCACCAACATTGCTTGTG...CTGGGCATATCCACCACCTCCCTCACCAACATTGCTTGTGCCACACCCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp GAGTTGCTCTCTGGACAGTTCCTCTGGCCCCTGAGATGTCATTGCTGGCACTGGCATCTGGAGGGGAGATaGCTTCCTTCTGGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: ELLSGQFLWPLRCHCWHWHLEGR*LPSGLP
Trigger: TGGGAGCCCAGAAGGAAGCCATCTCCCCTCCAGATG...CCAGTGCCAGCAATGACATCTCAGGGGCCAGAGGAACTGTCCAGAGAGCAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR GCA 90 bp TCTCTGAATGCTTCCTGCTCTGGGCCCTCAAGTTGGCCCTGTGACATCCTTAGATGTTATCTGCATGTGTaGGTGCGCGGGTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SLNASCSGPSSWPCDILRCYLHV*VRGWGW
Trigger: CCACCCCCACCCGCGCACGCACACATGCAGATAACA...TCTAAGGATGTCACAGGGCCAACTTGAGGGCCCAGAGCAGGAAGCATTCAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR GCA 90 bp TTCATGGTTCCCACCACCCCGGTGTCAAGGGGGCTCTTGCCACCAAGGGAGTGCTATTCTCATTCAAGCTaGAGTGTTCAGCACAGCCCG +
Preference number: 4 (lower is better)
Translates to: FMVPTTPVSRGLLPPRECYSHSS*SVQHSP
Trigger: CGGGCTGTGCTGAACACTGCAGCTTGAATGAGAATA...GCACTCCCTTGGTGGCAAGAGCCCCCTTGACACCGGGGTGGTGGGAACCATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR GCA 90 bp ATGAGGTTGAAGAATACACAAAACTTGGACCCCATGAGAGCCAGAGGCCAGCCCTTATCCACATGCAGCTaGAGGGGCTCCCACGGCTGG +
Preference number: 4 (lower is better)
Translates to: MRLKNTQNLDPMRARGQPLSTCS*RGSHGW
Trigger: CCAGCCGTGGGAGCCCCTGCAGCTGCATGTGGATAA...GGGCTGGCCTCTGGCTCTCATGGGGTCCAAGTTTTGTGTATTCTTCAACCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR GCA 90 bp AAGGGGGCTCTTGCCACCAAGGGAGTGCCCATGCCCGTGAGACCTGGAGAAGTCCTTAGATCTCAGAGTTaGTCTCTGGACAGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: KGALATKGVPMPVRPGEVLRSQS*SLDSSS
Trigger: AGAGGAACTGTCCAGAGAGCAACTCTGAGATCTAAG...GACTTCTCCAGGTCTCACGGGCATGGGCACTCCCTTGGTGGCAAGAGCCCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR GCA 90 bp GAGGTTGAAGAATACACAAAACTTGGACCCCATGAGAGCCAGAGGCCAGCCCCCCCCCTGAGATGTCATTaGTGGCACTGGAGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: EVEEYTKLGPHESQRPAPPLRCH*WHWSVH
Trigger: ATGGACACTCCAGTGCCAGCAATGACATCTCAGGGG...GGGGGCTGGCCTCTGGCTCTCATGGGGTCCAAGTTTTGTGTATTCTTCAACCTC
54% GC, longest homopolymer 9 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR GCA 90 bp TCAGTTCTTGTCAATGAGGTTGAAGAATACACAAAACTTGGACCCCATGAGAGCCGTGAGCGGGGCTGCTaGAGACGTGCGTGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: SVLVNEVEEYTKLGPHESRERGC*RRACGS
Trigger: TGACCCACACGCACGTCTGCAGCAGCCCCGCTCACG...GCTCTCATGGGGTCCAAGTTTTGTGTATTCTTCAACCTCATTGACAAGAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp GAGGTTGAAGAATACACAAAACTTGGACCCCATGAGAGCCAGAGGCCAGCCCCCTTCCCCGGAGGAAATTaGAGTAGACTCGGAAGAGTT +
Preference number: 4 (lower is better)
Translates to: EVEEYTKLGPHESQRPAPFPGGN*SRLGRV
Trigger: AACTCTTCCGAGTCTACTCCAATTTCCTCCGGGGAA...GGGGGCTGGCCTCTGGCTCTCATGGGGTCCAAGTTTTGTGTATTCTTCAACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp AATGAGGTTGAAGAATACACAAAACTTGGACCCCATGAGAGCCAGAGGCCAGCCCTCAGAGTTGCTCTCTaGACAGTTCCTCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: NEVEEYTKLGPHESQRPALRVAL*TVPLAP
Trigger: AGGGGCCAGAGGAACTGTCCAGAGAGCAACTCTGAG...GGCTGGCCTCTGGCTCTCATGGGGTCCAAGTTTTGTGTATTCTTCAACCTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR TCA 90 bp TCCCTGATGGTAGGTGCGAAAACAGGTAAATCGCCTCCAAAGCGTGTCCTGGCATGGTGTCTGGGACAGTaGTATTCTCATTCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: SLMVGAKTGKSPPKRVLAWCLGQ*YSHSSC
Trigger: GCAGCTTGAATGAGAATATCACTGTCCCAGACACCA...TGCCAGGACACGCTTTGGAGGCGATTTACCTGTTTTCGCACCTACCATCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp AAGGGGGCTCTTGCCACCAAGGGAGTGCCCATGCCCGTGAGACCTGGAGAAGTCATTAACTTTGGTGTCTaGGACAGTGATATTCTCATT +
Preference number: 4 (lower is better)
Translates to: KGALATKGVPMPVRPGEVINFGV*DSDILI
Trigger: AATGAGAATATCACTGTCCCAGACACCAAAGTTAAT...GACTTCTCCAGGTCTCACGGGCATGGGCACTCCCTTGGTGGCAAGAGCCCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp TCAGTTCTTGTCAATGAGGTTGAAGAATACACAAAACTTGGACCCCATGAGAGCGCACTGGAGTGTCCATaGGACAGGCTGGCGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SVLVNEVEEYTKLGPHESALECP*DRLALS
Trigger: GCTCAGCGCCAGCCTGTCCCATGGACACTCCAGTGC...GCTCTCATGGGGTCCAAGTTTTGTGTATTCTTCAACCTCATTGACAAGAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR GCA 90 bp AAAACAGGTAAATCGCCTCCAAAGCGTGTCCTGGCATCAAATTTTGCAGGGTGCTCTCTGAATGCTTCCTaGTCTGGGCCCTCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: KTGKSPPKRVLASNFAGCSLNAS*SGPSSW
Trigger: CCAACTTGAGGGCCCAGAGCAGGAAGCATTCAGAGA...GCACCCTGCAAAATTTGATGCCAGGACACGCTTTGGAGGCGATTTACCTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR GCA 90 bp CTTGTCAATGAGGTTGAAGAATACACAAAACTTGGACCCCATGAGAGCCAGAGGCCTGGCATCAAATTTTaGAGGGTGCCGAGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: LVNEVEEYTKLGPHESQRPGIKF*RVPSEL
Trigger: GAGCTCACTCGGCACCCTGCAAAATTTGATGCCAGG...CCTCTGGCTCTCATGGGGTCCAAGTTTTGTGTATTCTTCAACCTCATTGACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR GCA 90 bp AATGAGGTTGAAGAATACACAAAACTTGGACCCCATGAGAGCCAGAGGCCAGCCGGAGAAGTCACAGCTTaGCACCTAAGTTATCCAGGT +
Preference number: 4 (lower is better)
Translates to: NEVEEYTKLGPHESQRPAGEVTA*HLSYPG
Trigger: ACCTGGATAACTTAGGTGGCAAGCTGTGACTTCTCC...GGCTGGCCTCTGGCTCTCATGGGGTCCAAGTTTTGTGTATTCTTCAACCTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp GTGGTTTCAGTTCTTGTCAATGAGGTTGAAGAATACACAAAACTTGGACCCCATCCAGGTGGACACACCTaGTCATCTGTCCCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: VVSVLVNEVEEYTKLGPHPGGHT*SSVPCP
Trigger: AGGACAGGGGACAGATGACCAGGTGTGTCCACCTGG...ATGGGGTCCAAGTTTTGTGTATTCTTCAACCTCATTGACAAGAACTGAAACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CCA 90 bp GTGGTTTCAGTTCTTGTCAATGAGGTTGAAGAATACACAAAACTTGGACCCCATCATGCCCGTGAGACCTaGAGAAGTCACAGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: VVSVLVNEVEEYTKLGPHHARET*RSHSLP
Trigger: TGGCAAGCTGTGACTTCTCCAGGTCTCACGGGCATG...ATGGGGTCCAAGTTTTGTGTATTCTTCAACCTCATTGACAAGAACTGAAACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS CCA 90 bp CCTCATCCCGGGAAGCTCGGCGGTGCAGGGCCAGCCCCACGGGCCTaGAGGAGAGGGCGGCTGTCCAGGGGGCGCGGTGTCGGAGCAGAG +
Preference number: 5 (lower is better)
Translates to: PHPGKLGGAGPAPRA*RRGRLSRGRGVGAE
Trigger: CTCTGCTCCGACACCGCGCCCCCTGGACAGCCGCCCTCTCCTCCAGGCCCGTGGGGCTGGCCCTGCACCGCCGAGCTTCCCGGGATGAGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS GCA 90 bp TGGGTCATGGGGGCTGCTCCCGGGCCCTGGGTCGCGGGAGGGGAGTaGAGCCGGTTGCGCACCCTTGGGACTGGCGGAGCGTGCTATCTG +
Preference number: 5 (lower is better)
Translates to: WVMGAAPGPWVAGGE*SRLRTLGTGGACYL
Trigger: CAGATAGCACGCTCCGCCAGTCCCAAGGGTGCGCAACCGGCTGCACTCCCCTCCCGCGACCCAGGGCCCGGGAGCAGCCCCCATGACCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS CCA 90 bp CTGCTGCAGACGTGCGTGTGGGTCATGGGGGCTGCTCCCGGGCCCTaGGTCGCGGGAGGGGAGTGCAGCCGGTTGCGCACCCTTGGGACT +
Preference number: 5 (lower is better)
Translates to: LLQTCVWVMGAAPGP*VAGGECSRLRTLGT
Trigger: AGTCCCAAGGGTGCGCAACCGGCTGCACTCCCCTCCCGCGACCCAGGGCCCGGGAGCAGCCCCCATGACCCACACGCACGTCTGCAGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CAA 90 bp AGAGCCAGAGGCCAGCCCCCATCCTGTCTTCATGGTTCCCACCACCCCGGTGTCGGGGAGTGCAGCCGGTaGCGCACCCTTGGGACTGGC +
Preference number: 5 (lower is better)
Translates to: RARGQPPSCLHGSHHPGVGECSR*RTLGTG
Trigger: GCCAGTCCCAAGGGTGCGCAACCGGCTGCACTCCCC...GACACCGGGGTGGTGGGAACCATGAAGACAGGATGGGGGCTGGCCTCTGGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CAA 90 bp AGTGGCGGGGGAGGGTGTGGCACAAGCAATGTTGGTGAGGGAGGTGGTGGATATGCCGGTTGCGCACCCTaGGGACTGGCGGAGCGTGCT +
Preference number: 5 (lower is better)
Translates to: SGGGGCGTSNVGEGGGGYAGCAP*GLAERA
Trigger: AGCACGCTCCGCCAGTCCCAAGGGTGCGCAACCGGC...ATATCCACCACCTCCCTCACCAACATTGCTTGTGCCACACCCTCCCCCGCCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CAA 90 bp CATGAGAGCCAGAGGCCAGCCCCCATCCTGTCTTCATGGTTCCCACCACCCCGGGTGTCAAGGGGGCTCTaGCCACCAAGGGAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: HESQRPAPILSSWFPPPRVSRGL*PPRECP
Trigger: TGGGCACTCCCTTGGTGGCAAGAGCCCCCTTGACAC...CCGGGGTGGTGGGAACCATGAAGACAGGATGGGGGCTGGCCTCTGGCTCTCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS GCA 90 bp AGCAGAGTGGTGAGGCTGCGAAGGCCACTGACGGCTTTATCCACATaGAGCTGCAGGGGCTCCCACGGCTGGGAAGAGTTGACCAACAGG +
Preference number: 5 (lower is better)
Translates to: SRVVRLRRPLTALST*SCRGSHGWEELTNR
Trigger: CCTGTTGGTCAACTCTTCCCAGCCGTGGGAGCCCCTGCAGCTGCATGTGGATAAAGCCGTCAGTGGCCTTCGCAGCCTCACCACTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS TCA 90 bp GAGTTTGCGGAAAGTGTCAGCAGTGATTGTTCGGAGTGGAGCAGCTaGGGCCGCATCTGGAGGGGAGATGGCTTCCTTCTGGGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: EFAESVSSDCSEWSS*GRIWRGDGFLLGSQ
Trigger: CTGGGAGCCCAGAAGGAAGCCATCTCCCCTCCAGATGCGGCCTCAGCTGCTCCACTCCGAACAATCACTGCTGACACTTTCCGCAAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CAA 90 bp ATGAGGTTGAAGAATACACAAAACTTGGACCCCATGAGAGCCAGAGGCCAGCCCCACGGCTGGGAAGAGTaGACCAACAGGGCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: MRLKNTQNLDPMRARGQPHGWEE*TNRAWP
Trigger: GGGCCAGGCCCTGTTGGTCAACTCTTCCCAGCCGTG...GGGCTGGCCTCTGGCTCTCATGGGGTCCAAGTTTTGTGTATTCTTCAACCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CAA 90 bp GAGTTGCTCTCTGGACAGTTCCTCTGGCCCCTGAGATGTCATTGCTGGCACTGGGCCCCTGAGATGTCATaGCTGGCACTGGAGTGTCCA +
Preference number: 5 (lower is better)
Translates to: ELLSGQFLWPLRCHCWHWAPEMS*LALECP
Trigger: TGGACACTCCAGTGCCAGCAATGACATCTCAGGGGC...CCAGTGCCAGCAATGACATCTCAGGGGCCAGAGGAACTGTCCAGAGAGCAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CAA 90 bp CCCACCACCCCGGTGTCAAGGGGGCTCTTGCCACCAAGGGAGTGCCCATGCCCGTGGTGGTTTCAGTTCTaGTCAATGAGGTTGAAGAAT +
Preference number: 5 (lower is better)
Translates to: PTTPVSRGLLPPRECPCPWWFQF*SMRLKN
Trigger: ATTCTTCAACCTCATTGACAAGAACTGAAACCACCA...CGGGCATGGGCACTCCCTTGGTGGCAAGAGCCCCCTTGACACCGGGGTGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS TCA 90 bp GGAAATTGGAGTAGACTCGGAAGAGTTTGCGGAAAGTGTCAGCAGTaGTTGTTCGGAGTGGAGCAGCTGAGGCCGCATCTGGAGGGGAGA +
Preference number: 5 (lower is better)
Translates to: GNWSRLGRVCGKCQQ*LFGVEQLRPHLEGR
Trigger: TCTCCCCTCCAGATGCGGCCTCAGCTGCTCCACTCCGAACAATCACTGCTGACACTTTCCGCAAACTCTTCCGAGTCTACTCCAATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS CCA 90 bp CCCGACCTCCATCCTCTTCCAGGCATAGAAATTAACTTTGGTGTCTaGGACAGTGATATTCTCATTCAAGCTGCAGTGTTCAGCACAGCC +
Preference number: 5 (lower is better)
Translates to: PDLHPLPGIEINFGV*DSDILIQAAVFSTA
Trigger: GGCTGTGCTGAACACTGCAGCTTGAATGAGAATATCACTGTCCCAGACACCAAAGTTAATTTCTATGCCTGGAAGAGGATGGAGGTCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CAA 90 bp CTTGTCAATGAGGTTGAAGAATACACAAAACTTGGACCCCATGAGAGCCAGAGGTGGAGAAGTCACAGCTaGCCACCTAAGTTATCCAGG +
Preference number: 5 (lower is better)
Translates to: LVNEVEEYTKLGPHESQRWRSHS*PPKLSR
Trigger: CCTGGATAACTTAGGTGGCAAGCTGTGACTTCTCCA...CCTCTGGCTCTCATGGGGTCCAAGTTTTGTGTATTCTTCAACCTCATTGACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS-3UTR CAA 90 bp TCAGTTCTTGTCAATGAGGTTGAAGAATACACAAAACTTGGACCCCATGAGAGCAAGAATACACAAAACTaGGACCCCATGAGAGCCAGA +
Preference number: 5 (lower is better)
Translates to: SVLVNEVEEYTKLGPHESKNTQN*DPMRAR
Trigger: TCTGGCTCTCATGGGGTCCAAGTTTTGTGTATTCTT...GCTCTCATGGGGTCCAAGTTTTGTGTATTCTTCAACCTCATTGACAAGAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS GCA 72 bp GGGGCTGCTCCCGGGCCCTGGGTCGCGGGAGGGGAGTaGAGCCGGTTGCGCACCCTTGGGACTGGCGGAGCG +
Preference number: 6 (lower is better)
Translates to: GAAPGPWVAGGE*SRLRTLGTGGA
Trigger: CGCTCCGCCAGTCCCAAGGGTGCGCAACCGGCTGCACTCCCCTCCCGCGACCCAGGGCCCGGGAGCAGCCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS CCA 72 bp CCCATCTCCGCGCCTGGCCGGGGTCCCTCAGCGACCTaGGGCGCGCCGGGTGACCACACCGGGGGCCCTCAT +
Preference number: 6 (lower is better)
Translates to: PISAPGRGPSAT*GAPGDHTGGPH
Trigger: ATGAGGGCCCCCGGTGTGGTCACCCGGCGCGCCCCAGGTCGCTGAGGGACCCCGGCCAGGCGCGGAGATGGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS CCA 72 bp ACGTGCGTGTGGGTCATGGGGGCTGCTCCCGGGCCCTaGGTCGCGGGAGGGGAGTGCAGCCGGTTGCGCACC +
Preference number: 6 (lower is better)
Translates to: TCVWVMGAAPGP*VAGGECSRLRT
Trigger: GGTGCGCAACCGGCTGCACTCCCCTCCCGCGACCCAGGGCCCGGGAGCAGCCCCCATGACCCACACGCACGT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS GCA 72 bp CCGGGCCCTGGGTCGCGGGAGGGGAGTGCAGCCGGTTaGGCACCCTTGGGACTGGCGGAGCGTGCTATCTGG +
Preference number: 6 (lower is better)
Translates to: PGPGSREGSAAG*APLGLAERAIW
Trigger: CCAGATAGCACGCTCCGCCAGTCCCAAGGGTGCGCAACCGGCTGCACTCCCCTCCCGCGACCCAGGGCCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS GCA 72 bp CCCCGCAGGACAGCTTCCGACAGCAGGGCCAGGCCCTaGCAGACTTCTACGGCCTGCTGCCCGACCTCCATC +
Preference number: 6 (lower is better)
Translates to: PRRTASDSRARP*QTSTACCPTSI
Trigger: GATGGAGGTCGGGCAGCAGGCCGTAGAAGTCTGGCAGGGCCTGGCCCTGCTGTCGGAAGCTGTCCTGCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS CCA 72 bp GGCTCCCACGGCTGGGAAGAGTTGACCAACAGGGCCTaGCCCCGCAGGACAGCTTCCGACAGCAGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: GSHGWEELTNRA*PRRTASDSRAR
Trigger: CCTGGCCCTGCTGTCGGAAGCTGTCCTGCGGGGCCAGGCCCTGTTGGTCAACTCTTCCCAGCCGTGGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS CAA 90 bp CGACGGGGTTCAGGAGTGGCGGGGGAGGGTGTGGCACAAGCAATGTaGGTGAGGGAGGTGGTGGATATGCCCAGGTGGACACACCTGGTC +
Preference number: 6 (lower is better)
Translates to: RRGSGVAGEGVAQAM*VREVVDMPRWTHLV
Trigger: GACCAGGTGTGTCCACCTGGGCATATCCACCACCTCCCTCACCAACATTGCTTGTGCCACACCCTCCCCCGCCACTCCTGAACCCCGTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS GCA 72 bp GTGAGGCTGCGAAGGCCACTGACGGCTTTATCCACATaGAGCTGCAGGGGCTCCCACGGCTGGGAAGAGTTG +
Preference number: 6 (lower is better)
Translates to: VRLRRPLTALST*SCRGSHGWEEL
Trigger: CAACTCTTCCCAGCCGTGGGAGCCCCTGCAGCTGCATGTGGATAAAGCCGTCAGTGGCCTTCGCAGCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS TCA 72 bp AGTAGACTCGGAAGAGTTTGCGGAAAGTGTCAGCAGTaGTTGTTCGGAGTGGAGCAGCTGAGGCCGCATCTG +
Preference number: 6 (lower is better)
Translates to: SRLGRVCGKCQQ*LFGVEQLRPHL
Trigger: CAGATGCGGCCTCAGCTGCTCCACTCCGAACAATCACTGCTGACACTTTCCGCAAACTCTTCCGAGTCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252723.3
CDS CCA 72 bp CCCCTGTGTACAGCTTCAGCTTTCCCCGGAGGAAATTaGAGTAGACTCGGAAGAGTTTGCGGAAAGTGTCAG +
Preference number: 6 (lower is better)
Translates to: PLCTASAFPGGN*SRLGRVCGKCQ
Trigger: CTGACACTTTCCGCAAACTCTTCCGAGTCTACTCCAATTTCCTCCGGGGAAAGCTGAAGCTGTACACAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252723.3