RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPN3 (Homo sapiens)

Ensembl gene IDs: ENSG00000049283

Ensembl transcript IDs: ENST00000268933.8, ENST00000503246.1, ENST00000503690.5, ENST00000504857.1, ENST00000507467.1, ENST00000507709.1, ENST00000507998.5, ENST00000510045.5, ENST00000510462.5, ENST00000511414.5, ENST00000512291.5, ENST00000512379.5, ENST00000514874.5, ENST00000515028.5, ENST00000515126.1, ENST00000537145.2, ENST00000571402.1, ENST00000574464.5

Found 928 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCCAGCGCCGGCGAGCCGGTGCGCATCTGGTTTAGCGTCGGCCTaGCCGGCTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGC +
Preference number: 1 (lower is better)
Translates to: GPAPASRCASGLASA*PARPRRTGWWGTER
Trigger: GCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAGCCGGGCAGGCCGACGCTAAACCAGATGCGCACCGGCTCGCCGGCGCTGGGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR CCA 90 bp GTCCGCGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTaGCTCGGCGTTCCACTAGCACCGGCGCCCCGCCCAGCCCCGGGT +
Preference number: 1 (lower is better)
Translates to: VRVQLPEPPRDTSRH*LGVPLAPAPRPAPG
Trigger: ACCCGGGGCTGGGCGGGGCGCCGGTGCTAGTGGAACGCCGAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACGCGGAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
3UTR CCA 90 bp CCCCAGGGCTCAGAGGAGGAGAGCATGGGAGTCAGATCCCAGGGCTaGCTTCGGGACAGGACGGTTCCTGAGGGGATCGGAGACCAGGGG +
Preference number: 1 (lower is better)
Translates to: PQGSEEESMGVRSQG*LRDRTVPEGIGDQG
Trigger: CCCCTGGTCTCCGATCCCCTCAGGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCATGCTCTCCTCCTCTGAGCCCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR CCA 90 bp TCCAGTCTTTATTATGCGGGCGTTCAGTTTCTAGCTCCCGGGCCGTaGTCCGCGTCCCGGCTGAGCTCGGCGTGGGCAGCAGCGGCTGCG +
Preference number: 1 (lower is better)
Translates to: SSLYYAGVQFLAPGP*SASRLSSAWAAAAA
Trigger: CGCAGCCGCTGCTGCCCACGCCGAGCTCAGCCGGGACGCGGACCACGGCCCGGGAGCTAGAAACTGAACGCCCGCATAATAAAGACTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537145.2
3UTR GCA 90 bp AGCCTGGGAGCTCCTGCACTTGGCTTCTGCCACAGCCGCATCACGTaGCCCTGGCTTGTCTACCCTGCTGCGCTCGAGCTCCTGGAGGTT +
Preference number: 1 (lower is better)
Translates to: SLGAPALGFCHSRIT*PWLVYPAALELLEV
Trigger: AACCTCCAGGAGCTCGAGCGCAGCAGGGTAGACAAGCCAGGGGCACGTGATGCGGCTGTGGCAGAAGCCAAGTGCAGGAGCTCCCAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR GCA 90 bp TTCTCTCTCAGGCTCTCTGTCCCGCTGATGGTGGACCACGGCCCCTaGACCATTGGCCATGGGGGAGCCATCACCCTGCCAGGACCTCAC +
Preference number: 1 (lower is better)
Translates to: FSLRLSVPLMVDHGP*TIGHGGAITLPGPH
Trigger: GTGAGGTCCTGGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGTGGTCCACCATCAGCGGGACAGAGAGCCTGAGAGAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
3UTR CCA 90 bp TCCAGTCTTTATTATGCGGGCGTTCAGTTTCTAGCTCCCGGGCCGTaGTCCGCGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCC +
Preference number: 1 (lower is better)
Translates to: SSLYYAGVQFLAPGP*SASSFQSRRGIPAA
Trigger: GGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACGCGGACCACGGCCCGGGAGCTAGAAACTGAACGCCCGCATAATAAAGACTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
3UTR CCA 90 bp GGAGCTCCTGCACTTGGCTTCTGCCACAGCCGCATCACGTGCCCCTaGCTTGTCTACCCTGCTGCGCTCGAGCTCCTGGAGGTTGGATCC +
Preference number: 1 (lower is better)
Translates to: GAPALGFCHSRITCP*LVYPAALELLEVGS
Trigger: GGATCCAACCTCCAGGAGCTCGAGCGCAGCAGGGTAGACAAGCCAGGGGCACGTGATGCGGCTGTGGCAGAAGCCAAGTGCAGGAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR GCA 90 bp AGGGACCCAGGAAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTaGTTGGCTGGGTTAGTGCTTCCCCTAGTATGCCCAGGTCCAGGG +
Preference number: 1 (lower is better)
Translates to: RDPGRTRESGKLGPL*LAGLVLPLVCPGPG
Trigger: CCCTGGACCTGGGCATACTAGGGGAAGCACTAACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTTCCTGGGTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR CCA 90 bp GCATCACGTGCCCCTGGCTTGTCTACCCTGCTGCGCTCGAGCTCCTaGAGGTTGGATCCCTCCAAGGTGAGCCCAGCACTTTGTCCACAG +
Preference number: 1 (lower is better)
Translates to: ASRAPGLSTLLRSSS*RLDPSKVSPALCPQ
Trigger: CTGTGGACAAAGTGCTGGGCTCACCTTGGAGGGATCCAACCTCCAGGAGCTCGAGCGCAGCAGGGTAGACAAGCCAGGGGCACGTGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR CCA 90 bp CCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGGAACTGGGGCTaGGGTCTCCAAACAGGTCCAGCTCCACAGGGCTGCTGGGCTTCC +
Preference number: 1 (lower is better)
Translates to: PGHLAPSCHFAWNWG*GLQTGPAPQGCWAS
Trigger: GGAAGCCCAGCAGCCCTGTGGAGCTGGACCTGTTTGGAGACCCCAGCCCCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR CCA 90 bp CCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGGAACTaGGGCTGGGGTCTCCAAACAGGTCCAGCTCCACAGGGCTGCTGG +
Preference number: 1 (lower is better)
Translates to: PGPGHLAPSCHFAWN*GWGLQTGPAPQGCW
Trigger: CCAGCAGCCCTGTGGAGCTGGACCTGTTTGGAGACCCCAGCCCCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR CCA 90 bp AGGAAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTGCTTGGCTaGGTTAGTGCTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGC +
Preference number: 1 (lower is better)
Translates to: RKDSGVRQARASLLG*VSASPSMPRSRASG
Trigger: GCCAGATGCCCTGGACCTGGGCATACTAGGGGAAGCACTAACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR TCA 90 bp TTCTCCTCCTCCTTTCTCTCTTCTCTCTCAGGCTCTCTGTCCCGCTaGTGGTGGACCACGGCCCCTGCACCATTGGCCATGGGGGAGCCA +
Preference number: 1 (lower is better)
Translates to: FSSSFLSSLSGSLSR*WWTTAPAPLAMGEP
Trigger: TGGCTCCCCCATGGCCAATGGTGCAGGGGCCGTGGTCCACCATCAGCGGGACAGAGAGCCTGAGAGAGAAGAGAGAAAGGAGGAGGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
3UTR GCA 90 bp GAAGGCCATTTGTCCCTGAAAGGGGGATGGAGGCTGGCTGCAGGCTaGCTGCAGAGCCAGACCCCAAGCACTGAGGACACATCAGTGTCC +
Preference number: 1 (lower is better)
Translates to: EGHLSLKGGWRLAAG*LQSQTPSTEDTSVS
Trigger: GGACACTGATGTGTCCTCAGTGCTTGGGGTCTGGCTCTGCAGGCAGCCTGCAGCCAGCCTCCATCCCCCTTTCAGGGACAAATGGCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR GCA 90 bp GACTCAGTAAAACAAAGGAGCCTGGGAGCTCCTGCACTTGGCTTCTaGCACAGCCGCATCACGTGCCCCTGGCTTGTCTACCCTGCTGCG +
Preference number: 1 (lower is better)
Translates to: DSVKQRSLGAPALGF*HSRITCPWLVYPAA
Trigger: CGCAGCAGGGTAGACAAGCCAGGGGCACGTGATGCGGCTGTGGCAGAAGCCAAGTGCAGGAGCTCCCAGGCTCCTTTGTTTTACTGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR CCA 90 bp CTCCAGCCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATaGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAG +
Preference number: 1 (lower is better)
Translates to: LQPLLGLCGFWRFGK*VKGRGTTRCVGGLQ
Trigger: CTGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGGCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR CCA 90 bp GGAGCGCTGAGACCTGTCAGGAAGGGGTTCCGGGTCTTTGCAACCTaGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGGAAGCT +
Preference number: 1 (lower is better)
Translates to: GALRPVRKGFRVFAT*GALTNESRLTKEEA
Trigger: AGCTTCCTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAAGACCCGGAACCCCTTCCTGACAGGTCTCAGCGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR TCA 90 bp TGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCACTTGGTaGGAGCTGAGAACGAGGGTTCCAGTCTTTATTATGCGGGCGTTC +
Preference number: 1 (lower is better)
Translates to: CGRDPAATPRKKSTW*ELRTRVPVFIMRAF
Trigger: GAACGCCCGCATAATAAAGACTGGAACCCTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
3UTR TCA 90 bp GAGACCCGGCCGCCACACCCCGCAAAAAGTCCACTTGGTGAGAGCTaGGAACGAGGGTTCCAGTCTTTATTATGCGGGCGTTCAGTTTCT +
Preference number: 1 (lower is better)
Translates to: ETRPPHPAKSPLGES*ERGFQSLLCGRSVS
Trigger: AGAAACTGAACGCCCGCATAATAAAGACTGGAACCCTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTGGCGGCCGGGTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
3UTR TCA 90 bp CTACCCTGCTGCGCTCGAGCTCCTGGAGGTTGGATCCCTCCAAGGTaGGCCCAGCACTTTGTCCACAGCAGTCAGTCAATATTTGCTGAA +
Preference number: 1 (lower is better)
Translates to: LPCCARAPGGWIPPR*AQHFVHSSQSIFAE
Trigger: TTCAGCAAATATTGACTGACTGCTGTGGACAAAGTGCTGGGCTCACCTTGGAGGGATCCAACCTCCAGGAGCTCGAGCGCAGCAGGGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR GCA 90 bp TCTGAGCCACGGTTTCCTTGCCTGAAAAATGGGAGTAGTGCCGGCTaGAAGGTGAGATACCTGTGCAATCGCACTGCAGTGGGCTTTGCG +
Preference number: 1 (lower is better)
Translates to: SEPRFPCLKNGSSAG*KVRYLCNRTAVGFA
Trigger: CGCAAAGCCCACTGCAGTGCGATTGCACAGGTATCTCACCTTGCAGCCGGCACTACTCCCATTTTTCAGGCAAGGAAACCGTGGCTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR CCA 90 bp GGGCAGGTACGAAGATGTCAGCCAAGTCCAGGATGGAGGACTGGCTaGTTTTTAGCTTCTCCTCCTCCTTTCTCTCTTCTCTCTCAGGCT +
Preference number: 1 (lower is better)
Translates to: GQVRRCQPSPGWRTG*FLASPPPFSLLSQA
Trigger: AGCCTGAGAGAGAAGAGAGAAAGGAGGAGGAGAAGCTAAAAACCAGCCAGTCCTCCATCCTGGACTTGGCTGACATCTTCGTACCTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512379.5
3UTR CCA 90 bp GCCAGGGCAGGTACGAAGATGTCAGCCAAGTCCAGGATGGAGGACTaGCTGGTTTTTAGCTTCTCCTCCTCCTTTCTCTCTTCTCTCTCA +
Preference number: 1 (lower is better)
Translates to: ARAGTKMSAKSRMED*LVFSFSSSFLSSLS
Trigger: TGAGAGAGAAGAGAGAAAGGAGGAGGAGAAGCTAAAAACCAGCCAGTCCTCCATCCTGGACTTGGCTGACATCTTCGTACCTGCCCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512379.5
3UTR GCA 90 bp GTGACTTTGAGCATGCCATTCAACCTCTCTGAGCCACGGTTTCCTTaGCTGAAAAATGGGAGTAGTGCCGGCTGCAAGGTGAGATACCTG +
Preference number: 1 (lower is better)
Translates to: VTLSMPFNLSEPRFP*LKNGSSAGCKVRYL
Trigger: CAGGTATCTCACCTTGCAGCCGGCACTACTCCCATTTTTCAGGCAAGGAAACCGTGGCTCAGAGAGGTTGAATGGCATGCTCAAAGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR TCA 90 bp GGTCAAACCTTGGAGCAGAACTTTGAACCCTGTAAGTCTGACTCCTaGGCAGGTGTTCTTGTCCATCCTGTTTGTAACTGCATTGTGGGA +
Preference number: 1 (lower is better)
Translates to: GQTLEQNFEPCKSDS*AGVLVHPVCNCIVG
Trigger: TCCCACAATGCAGTTACAAACAGGATGGACAAGAACACCTGCTCAGGAGTCAGACTTACAGGGTTCAAAGTTCTGCTCCAAGGTTTGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR GCA 90 bp AGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGGGTTTAGCGTCGGCCTaGCCGGCTCGCCCGCGCCGA +
Preference number: 2 (lower is better)
Translates to: SGCGAKAPACGKTLTEAGGLASA*PARPRR
Trigger: TCGGCGCGGGCGAGCCGGGCAGGCCGACGCTAAACC...CCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCT
74% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp AGGCCCAGCGCCGGCGAGCCGGTGCGCATCTGGTTTAGCGTCGGCCTGCCCGGCCCCAGGGGTCTGTGGTaGGGGGCCCAGCAGGCAGCA +
Preference number: 2 (lower is better)
Translates to: RPSAGEPVRIWFSVGLPGPRGLW*GAQQAA
Trigger: TGCTGCCTGCTGGGCCCCCCACCACAGACCCCTGGG...GCCGGGCAGGCCGACGCTAAACCAGATGCGCACCGGCTCGCCGGCGCTGGGCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR TCA 90 bp GGCGCTGTAGGTCATGGAGCCCAGGGGCGCCCCCACAGGCCCGCCTGCCAGGCCTGGGGGACGGAGCGCTaGGACCTGTCAGGAAGGGGT +
Preference number: 2 (lower is better)
Translates to: GAVGHGAQGRPHRPACQAWGTER*DLSGRG
Trigger: ACCCCTTCCTGACAGGTCTCAGCGCTCCGTCCCCCA...GGCCTGGCAGGCGGGCCTGTGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR GCA 90 bp CGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCGGCGTTCCGGTTTAGCGTCGGCCTaGCCGGCTCGCCCGCGCCGA +
Preference number: 2 (lower is better)
Translates to: RPASRAAAGYQPPLARRSGLASA*PARPRR
Trigger: TCGGCGCGGGCGAGCCGGGCAGGCCGACGCTAAACC...GGAACGCCGAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
3UTR-3UTR TCA 90 bp CCTGCCCGGCTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCGCCGCTCCTCATCCTTaGGCAGGGCCATCACCTGCT +
Preference number: 2 (lower is better)
Translates to: PARLARAERVGGGRSAETAAPHP*AGPSPA
Trigger: AGCAGGTGATGGCCCTGCTCAAGGATGAGGAGCGGC...GGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAGCCGGGCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR GCA 90 bp AGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGGCGCCGGCGAGCCGGTaGGCATCTGGTTTAGCGTCG +
Preference number: 2 (lower is better)
Translates to: SGCGAKAPACGKTLTEAGAPASR*ASGLAS
Trigger: CGACGCTAAACCAGATGCGCACCGGCTCGCCGGCGC...CCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp TCGGCGTGGGCAGCAGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCGAGCCGGTGCGCATCTaGTTTAGCGTCGGCCTGCCC +
Preference number: 2 (lower is better)
Translates to: SAWAAAAAVRRLRPAGRREPVRI*FSVGLP
Trigger: GGGCAGGCCGACGCTAAACCAGATGCGCACCGGCTC...GCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTGCTGCCCACGCCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR TCA 90 bp CAGAGAGGCGCTGTAGGTCATGGAGCCCAGGGGCGCCCCCACAGGCCCGCCTGCTGGGGGACGGAGCGCTaGGACCTGTCAGGAAGGGGT +
Preference number: 2 (lower is better)
Translates to: QRGAVGHGAQGRPHRPACWGTER*DLSGRG
Trigger: ACCCCTTCCTGACAGGTCTCAGCGCTCCGTCCCCCA...GCAGGCGGGCCTGTGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCCTCTCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR TCA 90 bp GCTCTCTGTCCCGCTGATGGTGGACCACGGCCCCTGCACCATTGGCCATGGGGGCGCCGTAGCGGCGGCTaGAGCCCAGCTGCCCACTGC +
Preference number: 2 (lower is better)
Translates to: ALCPADGGPRPLHHWPWGRRSGG*SPAAHC
Trigger: GCAGTGGGCAGCTGGGCTTCAGCCGCCGCTACGGCG...CCCCCATGGCCAATGGTGCAGGGGCCGTGGTCCACCATCAGCGGGACAGAGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR CCA 90 bp AGGCCCAGCGCCGGCGAGCCGGTGCGCATCTGGTTTAGCGTCGGCCTGCCCGGCGGTCAGCCCCAGTGCTaGGGAGTTTGTGGTGGGGAG +
Preference number: 2 (lower is better)
Translates to: RPSAGEPVRIWFSVGLPGGQPQC*GVCGGE
Trigger: CTCCCCACCACAAACTCCCCAGCACTGGGGCTGACC...GCCGGGCAGGCCGACGCTAAACCAGATGCGCACCGGCTCGCCGGCGCTGGGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp CGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCGGCGTTCCAGGCGCTGTAGGTCATaGAGCCCAGGGGCGCCCCCA +
Preference number: 2 (lower is better)
Translates to: RPASRAAAGYQPPLARRSRRCRS*SPGAPP
Trigger: TGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCCT...GGAACGCCGAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
3UTR CAA 90 bp ATCTGGTTTAGCGTCGGCCTGCCCGGCTCGCCCGCGCCGAACGGGTaGGTGGGGGACGGAGCGCTGAGACCTGTCAGGAAGGGGTTCCGG +
Preference number: 2 (lower is better)
Translates to: IWFSVGLPGSPAPNG*VGDGALRPVRKGFR
Trigger: CCGGAACCCCTTCCTGACAGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAGCCGGGCAGGCCGACGCTAAACCAGAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR GCA 90 bp GTGGTCCGCGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCCCAGCTCCACAGGGCTaGTGGGCTTCCCAGAGGGCA +
Preference number: 2 (lower is better)
Translates to: VVRVQLPEPPRDTSRHWLPAPQG*WASQRA
Trigger: TGCCCTCTGGGAAGCCCAGCAGCCCTGTGGAGCTGG...GAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACGCGGACCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
3UTR-3UTR GCA 90 bp CTGCCCGGCTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTGGGGTTCCGGGTCTTTaGAACCTGGGGTGCCTTGAC +
Preference number: 2 (lower is better)
Translates to: LPGSPAPNGLVGDGALRPGVPGL*NLGCLD
Trigger: GTCAAGGCACCCCAGGTTGCAAAGACCCGGAACCCC...AGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAGCCGGGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR GCA 90 bp CTGCCCGGCTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTCACTGCCAATGCCGATaGCCTCCAGTGCCATGCGCT +
Preference number: 2 (lower is better)
Translates to: LPGSPAPNGLVGDGALRPHCQCR*PPVPCA
Trigger: AGCGCATGGCACTGGAGGGCATCGGCATTGGCAGTG...AGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAGCCGGGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR GCA 90 bp AGGCCCAGCGCCGGCGAGCCGGTGCGCATCTGGTTTAGCGTCGGCCTGCCCGGCATGGCGAGGGCCAGCTaGAGCTGCAGTTCCTCTTCC +
Preference number: 2 (lower is better)
Translates to: RPSAGEPVRIWFSVGLPGMARAS*SCSSSS
Trigger: GGAAGAGGAACTGCAGCTGCAGCTGGCCCTCGCCAT...GCCGGGCAGGCCGACGCTAAACCAGATGCGCACCGGCTCGCCGGCGCTGGGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR CCA 90 bp CTGCCAGGCCCAGCGCCGGCGAGCCGGTGCGCATCTGGTTTAGCGTCGGCCTGCTTGGTCTTGAGGGCGTaGGTTCGCTCCTGCCGCAGC +
Preference number: 2 (lower is better)
Translates to: LPGPAPASRCASGLASACLVLRA*VRSCRS
Trigger: GCTGCGGCAGGAGCGAACCCACGCCCTCAAGACCAA...GCAGGCCGACGCTAAACCAGATGCGCACCGGCTCGCCGGCGCTGGGCCTGGCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512379.5
3UTR-3UTR TCA 90 bp CAGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGACCAAGGAGGAAGCTaGGGGACCCAGGAAGGACTC +
Preference number: 2 (lower is better)
Translates to: QRLRCEGSGLREDANRGGDQGGS*GTQEGL
Trigger: GAGTCCTTCCTGGGTCCCTCAGCTTCCTCCTTGGTC...CCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR TCA 90 bp CCTGCCCGGCTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCCCAACGAGTCAAGGTTaGCCAAGGAGGAAGCTGAGG +
Preference number: 2 (lower is better)
Translates to: PARLARAERVGGGRSAETPTSQG*PRRKLR
Trigger: CCTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGG...GGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAGCCGGGCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR TCA 90 bp CTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGAGGGTTGCGCTCCTTGGTCTTaGGGGCGTGGGTTCGCTCCT +
Preference number: 2 (lower is better)
Translates to: LRCEGSGLREDANRGGEGCAPWS*GRGFAP
Trigger: AGGAGCGAACCCACGCCCTCAAGACCAAGGAGCGCA...ACCCTCCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512379.5
3UTR-3UTR GCA 90 bp CTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTGTCAGGAACCAGCTCCACAGGGCTaGTGGGCTTCCCAGAGGGCA +
Preference number: 2 (lower is better)
Translates to: LARAERVGGGRSAETCQEPAPQG*WASQRA
Trigger: TGCCCTCTGGGAAGCCCAGCAGCCCTGTGGAGCTGG...TTCCTGACAGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp CTGCCAGGCCCAGCGCCGGCGAGCCGGTGCGCATCTGGTTTAGCGTCGGCCTGCGATACCAGCCGCCACTaGCTCGGCGTTCCACTAGCA +
Preference number: 2 (lower is better)
Translates to: LPGPAPASRCASGLASACDTSRH*LGVPLA
Trigger: TGCTAGTGGAACGCCGAGCCAGTGGCGGCTGGTATC...GCAGGCCGACGCTAAACCAGATGCGCACCGGCTCGCCGGCGCTGGGCCTGGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
3UTR-3UTR CCA 90 bp GTGGTCCGCGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCCTGCACCATTGGCCATaGGGGAGCCATCACCCTGCC +
Preference number: 2 (lower is better)
Translates to: VVRVQLPEPPRDTSRHWLLHHWP*GSHHPA
Trigger: GGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAG...GAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACGCGGACCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
3UTR-3UTR CCA 90 bp ACGTCTGAGGCCGGGCCTGCTCCAGGTCGGAGGTATAGCGGGGTGACGAAGAGGCCCAGCAGGCAGCACTaGGGTCCTGCCCCAGGGCTC +
Preference number: 2 (lower is better)
Translates to: TSEAGPAPGRRYSGVTKRPSRQH*GPAPGL
Trigger: GAGCCCTGGGGCAGGACCCCAGTGCTGCCTGCTGGG...CCTCTTCGTCACCCCGCTATACCTCCGACCTGGAGCAGGCCCGGCCTCAGACGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR CCA 90 bp CTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGAGGGTGGTCAGCCCCAGTGCTaGGGAGTTTGTGGTGGGGAG +
Preference number: 2 (lower is better)
Translates to: LRCEGSGLREDANRGGEGGQPQC*GVCGGE
Trigger: CTCCCCACCACAAACTCCCCAGCACTGGGGCTGACC...ACCCTCCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp TCGGCGTGGGCAGCAGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCCGGGTCTTTGCAACCTaGGGTGCCTTGACCAACGAG +
Preference number: 2 (lower is better)
Translates to: SAWAAAAAVRRLRPAGRRRVFAT*GALTNE
Trigger: CTCGTTGGTCAAGGCACCCCAGGTTGCAAAGACCCG...GCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTGCTGCCCACGCCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp AGGAGTTGTAGGAGGACGGGGAGCCCCGGGAGCGGCTGTAGTCCTCGCCGTAGCAGGTTCTCGCGGCACTaGTGGGCCACCCGCTCGGAG +
Preference number: 2 (lower is better)
Translates to: RSCRRTGSPGSGCSPRRSRFSRH*WATRSE
Trigger: CTCCGAGCGGGTGGCCCACCAGTGCCGCGAGAACCT...GCTACGGCGAGGACTACAGCCGCTCCCGGGGCTCCCCGTCCTCCTACAACTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR TCA 90 bp CCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCAGGCTCTCTGTCCCGCTaGTGGTGGACCACGGCCCCT +
Preference number: 2 (lower is better)
Translates to: PVIHAVVETRPPHPAKSPGSLSR*WWTTAP
Trigger: AGGGGCCGTGGTCCACCATCAGCGGGACAGAGAGCC...TGGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512379.5
3UTR-3UTR TCA 90 bp CTGCCCGGCTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTCCAACGAGTCAAGGTTaGCCAAGGAGGAAGCTGAGG +
Preference number: 2 (lower is better)
Translates to: LPGSPAPNGLVGDGALRPPTSQG*PRRKLR
Trigger: CCTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGG...AGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAGCCGGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR GCA 90 bp GTGGTCCGCGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCCTGGCTTGTCTACCCTaGTGCGCTCGAGCTCCTGGA +
Preference number: 2 (lower is better)
Translates to: VVRVQLPEPPRDTSRHWLLACLP*CARAPG
Trigger: TCCAGGAGCTCGAGCGCAGCAGGGTAGACAAGCCAG...GAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACGCGGACCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR GCA 90 bp GTGGTCCGCGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCCACAGCCGCATCACGTaGCCCTGGCTTGTCTACCCT +
Preference number: 2 (lower is better)
Translates to: VVRVQLPEPPRDTSRHWLHSRIT*PWLVYP
Trigger: AGGGTAGACAAGCCAGGGGCACGTGATGCGGCTGTG...GAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACGCGGACCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR GCA 90 bp GGGAAGACGCTAACCGAGGCGGGGAGGGTCAAGCCAGCTGGCACGCTGCTGAGCCGGAGACCAGGGGTCTaGAGAAGGCCCCCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: GKTLTEAGRVKPAGTLLSRRPGV*RRPPGG
Trigger: TCCTCCTGGGGGCCTTCTGCAGACCCCTGGTCTCCG...GCTCAGCAGCGTGCCAGCTGGCTTGACCCTCCCCGCCTCGGTTAGCGTCTTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR GCA 90 bp GCCGGCGAGCCGGTGCGCATCTGGTTTAGCGTCGGCCTGCCCGGCTCGCCCGCGAAGCTCGGGCCTCTTTaGTTGGCTGGGTTAGTGCTT +
Preference number: 2 (lower is better)
Translates to: AGEPVRIWFSVGLPGSPAKLGPL*LAGLVL
Trigger: AAGCACTAACCCAGCCAAGCAAAGAGGCCCGAGCTT...CGCGGGCGAGCCGGGCAGGCCGACGCTAAACCAGATGCGCACCGGCTCGCCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp GTGGTCCGCGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCCTGCGCTCGAGCTCCTaGAGGTTGGATCCCTCCAAG +
Preference number: 2 (lower is better)
Translates to: VVRVQLPEPPRDTSRHWLLRSSS*RLDPSK
Trigger: CTTGGAGGGATCCAACCTCCAGGAGCTCGAGCGCAG...GAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACGCGGACCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR CCA 90 bp CGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCGGCGTTCCGTCAGATCCCAGGGCTaGCTTCGGGACAGGACGGTT +
Preference number: 2 (lower is better)
Translates to: RPASRAAAGYQPPLARRSVRSQG*LRDRTV
Trigger: AACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGAC...GGAACGCCGAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
3UTR-3UTR CCA 90 bp CCCAGGAAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTGCTTGGCTGGGTTCCCAGCAGGCAGCACTaGGGTCCTGCCCCAGGGCTC +
Preference number: 2 (lower is better)
Translates to: PRKDSGVRQARASLLGWVPSRQH*GPAPGL
Trigger: GAGCCCTGGGGCAGGACCCCAGTGCTGCCTGCTGGG...AACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTTCCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp GTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGGGAGGCTCCCCACCCAGGGGTCTGTGGTaGGGGGCCCAGCAGGCAGCA +
Preference number: 2 (lower is better)
Translates to: VKGRGTTRCVGGLQGGSPPRGLW*GAQQAA
Trigger: TGCTGCCTGCTGGGCCCCCCACCACAGACCCCTGGG...TGGGGAGCCTCCCTGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp GCATGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCTGAGGGGACCCAGGGGTCTGTGGTaGGGGGCCCAGCAGGCAGCA +
Preference number: 2 (lower is better)
Translates to: AWESDPRAGFGTGRFLRGPRGLW*GAQQAA
Trigger: TGCTGCCTGCTGGGCCCCCCACCACAGACCCCTGGG...TCCCCTCAGGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp AGCTCGGCGTGGGCAGCAGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGAGCTCCAGCCCCTCCTTaGTCTCTGTGGATTCTGGAG +
Preference number: 2 (lower is better)
Translates to: SSAWAAAAAVRRLRPAGRAPAPP*SLWILE
Trigger: CTCCAGAATCCACAGAGACCAAGGAGGGGCTGGAGC...TCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTGCTGCCCACGCCGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp CAGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGCTCCAGCCCCTCCTTaGTCTCTGTGGATTCTGGAG +
Preference number: 2 (lower is better)
Translates to: QRLRCEGSGLREDANRGGAPAPP*SLWILE
Trigger: CTCCAGAATCCACAGAGACCAAGGAGGGGCTGGAGC...CCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp GCCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCGAGGGTCAAGCCAGCTaGCACGCTGCTGAGCGGGAG +
Preference number: 2 (lower is better)
Translates to: AGDPRCGRDPAATPRKKSEGQAS*HAAERE
Trigger: CTCCCGCTCAGCAGCGTGCCAGCTGGCTTGACCCTC...GGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512379.5
ENST00000537145.2
3UTR-3UTR TCA 90 bp CTGCCAGGCCCAGCGCCGGCGAGCCGGTGCGCATCTGGTTTAGCGTCGGCCTGCCCACTTGGTGAGAGCTaGGAACGAGGGTTCCAGTCT +
Preference number: 2 (lower is better)
Translates to: LPGPAPASRCASGLASACPLGES*ERGFQS
Trigger: AGACTGGAACCCTCGTTCTCAGCTCTCACCAAGTGG...GCAGGCCGACGCTAAACCAGATGCGCACCGGCTCGCCGGCGCTGGGCCTGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512379.5
ENST00000537145.2
3UTR-3UTR TCA 90 bp CGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCGGCGTTCCTGGATCCCTCCAAGGTaGGCCCAGCACTTTGTCCAC +
Preference number: 2 (lower is better)
Translates to: RPASRAAAGYQPPLARRSWIPPR*AQHFVH
Trigger: GTGGACAAAGTGCTGGGCTCACCTTGGAGGGATCCA...GGAACGCCGAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR GCA 90 bp GATGGTGGACCACGGCCCCTGCACCATTGGCCATGGGGGAGCCATCACCCTGCCGGGGAGCCATCACCCTaGCAGGACCTCACCTCCTTC +
Preference number: 2 (lower is better)
Translates to: DGGPRPLHHWPWGSHHPAGEPSP*QDLTSF
Trigger: GAAGGAGGTGAGGTCCTGGCAGGGTGATGGCTCCCC...GGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGTGGTCCACCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR GCA 90 bp CCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCACGGAGACCAGGGGTCTaGAGAAGGCCCCCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: PVIHAVVETRPPHPAKSPRRPGV*RRPPGG
Trigger: TCCTCCTGGGGGCCTTCTGCAGACCCCTGGTCTCCG...TGGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000512379.5
ENST00000537145.2
3UTR-3UTR GCA 90 bp TCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCGGCGTTCCACGGGGTTCCGGGTCTTTaGAACCTGGGGTGCCTTGAC +
Preference number: 2 (lower is better)
Translates to: SSFQSRRGIPAATGSAFHGVPGL*NLGCLD
Trigger: GTCAAGGCACCCCAGGTTGCAAAGACCCGGAACCCC...GTGGAACGCCGAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
3UTR-3UTR GCA 90 bp GGAGGAGAGCATGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCGCGTGGGTTCGCTCCTaGCGCAGCCGCTCCTCATCC +
Preference number: 2 (lower is better)
Translates to: GGEHGSQIPGLASGQDGSAWVRS*RSRSSS
Trigger: GGATGAGGAGCGGCTGCGGCAGGAGCGAACCCACGC...GGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCATGCTCTCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR CCA 90 bp TCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCGGCGTTCCACGGGAGCTCCTGCACTTaGCTTCTGCCACAGCCGCAT +
Preference number: 2 (lower is better)
Translates to: SSFQSRRGIPAATGSAFHGSSCT*LLPQPH
Trigger: ATGCGGCTGTGGCAGAAGCCAAGTGCAGGAGCTCCC...GTGGAACGCCGAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR CCA 90 bp CCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGAGGGTCAAGCCAGCTGGCACGGCTTGGAACTGGGGCTaGGGTCTCCAAACAGGTCCA +
Preference number: 2 (lower is better)
Translates to: PACGKTLTEAGRVKPAGTAWNWG*GLQTGP
Trigger: TGGACCTGTTTGGAGACCCCAGCCCCAGTTCCAAGC...CGTGCCAGCTGGCTTGACCCTCCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR GCA 90 bp TCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCGGCGTTCCACTCCAGCCCCGCCCCATaGCAGCTTTGTGACTTTGAG +
Preference number: 2 (lower is better)
Translates to: SSFQSRRGIPAATGSAFHSSPAP*QLCDFE
Trigger: CTCAAAGTCACAAAGCTGGCATGGGGCGGGGCTGGA...GTGGAACGCCGAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR GCA 90 bp AGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGAAGCTCGGGCCTCTTTaGTTGGCTGGGTTAGTGCTT +
Preference number: 2 (lower is better)
Translates to: SGCGAKAPACGKTLTEAGKLGPL*LAGLVL
Trigger: AAGCACTAACCCAGCCAAGCAAAGAGGCCCGAGCTT...CCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR GCA 90 bp CAGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGAAGCTCGGGCCTCTTTaGTTGGCTGGGTTAGTGCTT +
Preference number: 2 (lower is better)
Translates to: QRLRCEGSGLREDANRGGKLGPL*LAGLVL
Trigger: AAGCACTAACCCAGCCAAGCAAAGAGGCCCGAGCTT...CCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR GCA 90 bp GGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGGGAGGCTCCCCGCTGCCCACTGCCAATaGCGATGCCCTCCAGTGCCA +
Preference number: 2 (lower is better)
Translates to: GQRSRHHQVCRRSPGRLPAAHCQ*RCPPVP
Trigger: TGGCACTGGAGGGCATCGGCATTGGCAGTGGGCAGC...GGGGAGCCTCCCTGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR CCA 90 bp GCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTGTCAGGAAGGGGTTCCGGATACCAGCCGCCACTaGCTCGGCGTTCCACTAGCA +
Preference number: 2 (lower is better)
Translates to: AERVGGGRSAETCQEGVPDTSRH*LGVPLA
Trigger: TGCTAGTGGAACGCCGAGCCAGTGGCGGCTGGTATC...CGGAACCCCTTCCTGACAGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
3UTR-3UTR CCA 90 bp CCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCAGGAAGCGAAGGTGCCTaGGTGACGGGGGATGGAGGT +
Preference number: 2 (lower is better)
Translates to: PVIHAVVETRPPHPAKSPGSEGA*VTGDGG
Trigger: ACCTCCATCCCCCGTCACCCAGGCACCTTCGCTTCC...TGGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR CCA 90 bp CCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCAATCTGGGGCCCAGCCTaGGATCTCCAGGCCTTGGAG +
Preference number: 2 (lower is better)
Translates to: PVIHAVVETRPPHPAKSPIWGPA*DLQALE
Trigger: CTCCAAGGCCTGGAGATCCCAGGCTGGGCCCCAGAT...TGGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR CCA 90 bp CCTGCCCGGCTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCGGCCTAAAACCTGGCTaGTTTTTAGCTTCTCCTCCT +
Preference number: 2 (lower is better)
Translates to: PARLARAERVGGGRSAETGLKPG*FLASPP
Trigger: AGGAGGAGAAGCTAAAAACCAGCCAGGTTTTAGGCC...GGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAGCCGGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512291.5
3UTR-3UTR CCA 90 bp AGGAAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTGCTTGGCTGGGTTAGTCCCAGGGGTCTGTGGTaGGGGGCCCAGCAGGCAGCA +
Preference number: 2 (lower is better)
Translates to: RKDSGVRQARASLLGWVSPRGLW*GAQQAA
Trigger: TGCTGCCTGCTGGGCCCCCCACCACAGACCCCTGGG...ACTAACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp CTGCCAGGCCCAGCGCCGGCGAGCCGGTGCGCATCTGGTTTAGCGTCGGCCTGCTGGAGGTTTGGCAAATaGGTCAAAGGTCGAGGCACC +
Preference number: 2 (lower is better)
Translates to: LPGPAPASRCASGLASACWRFGK*VKGRGT
Trigger: GGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCA...GCAGGCCGACGCTAAACCAGATGCGCACCGGCTCGCCGGCGCTGGGCCTGGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp AGGCCCAGCGCCGGCGAGCCGGTGCGCATCTGGTTTAGCGTCGGCCTGCCCGGCCCTCCTTGGTCTCTGTaGATTCTGGAGGTTTGGCAA +
Preference number: 2 (lower is better)
Translates to: RPSAGEPVRIWFSVGLPGPPWSL*ILEVWQ
Trigger: TTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGG...GCCGGGCAGGCCGACGCTAAACCAGATGCGCACCGGCTCGCCGGCGCTGGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp CTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTGTCAGGAAGCTCCAGCCCCTCCTTaGTCTCTGTGGATTCTGGAG +
Preference number: 2 (lower is better)
Translates to: LARAERVGGGRSAETCQEAPAPP*SLWILE
Trigger: CTCCAGAATCCACAGAGACCAAGGAGGGGCTGGAGC...TTCCTGACAGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp CTTGGCTGGGTTAGTGCTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCTCGCGGCACTGGTaGGCCACCCGCTCGGAGCCC +
Preference number: 2 (lower is better)
Translates to: LGWVSASPSMPRSRASGSFSRHW*ATRSEP
Trigger: GGGCTCCGAGCGGGTGGCCCACCAGTGCCGCGAGAA...GGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAGCACTAACCCAGCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR TCA 90 bp GTGGTCCGCGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCCACGGTTTCCTTGCCTaGAAAATGGGAGTAGTGCCG +
Preference number: 2 (lower is better)
Translates to: VVRVQLPEPPRDTSRHWLHGFLA*KMGVVP
Trigger: CGGCACTACTCCCATTTTTCAGGCAAGGAAACCGTG...GAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACGCGGACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR TCA 90 bp GGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGGGAGGCTCCCCGCTCGGAGCCCGTCTTaGGCAGGTAGTCCAGCAATG +
Preference number: 2 (lower is better)
Translates to: GQRSRHHQVCRRSPGRLPARSPS*AGSPAM
Trigger: CATTGCTGGACTACCTGCTCAAGACGGGCTCCGAGC...GGGGAGCCTCCCTGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR TCA 90 bp TCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGCGCCGTAGCGGCGGCTaGAGCCCAGCTGCCCACTGC +
Preference number: 2 (lower is better)
Translates to: SGGLANGSKVEAPPGVSERRSGG*SPAAHC
Trigger: GCAGTGGGCAGCTGGGCTTCAGCCGCCGCTACGGCG...CTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR GCA 90 bp GGATACCAGCCGCCACTGGCTCGGCGTTCCACTAGCACCGGCGCCCCGCCCAGCTTGCACCCCACGTTGTaGAGCTGCAGTTTCCTAAAC +
Preference number: 2 (lower is better)
Translates to: GYQPPLARRSTSTGAPPSLHPTL*SCSFLN
Trigger: GTTTAGGAAACTGCAGCTGCACAACGTGGGGTGCAA...GCTGGGCGGGGCGCCGGTGCTAGTGGAACGCCGAGCCAGTGGCGGCTGGTATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268933.8
ENST00000512379.5
3UTR-3UTR GCA 90 bp GTGGTCCGCGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCCACTGCAGTGGGCTTTaGGCTTGGTTTCATGCTCTG +
Preference number: 2 (lower is better)
Translates to: VVRVQLPEPPRDTSRHWLHCSGL*AWFHAL
Trigger: CAGAGCATGAAACCAAGCGCAAAGCCCACTGCAGTG...GAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACGCGGACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR GCA 90 bp TCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGGTTTAGCGTCGGCCTaGCCGGCTCGCCCGCGCCGA +
Preference number: 2 (lower is better)
Translates to: SGGLANGSKVEAPPGVSEGLASA*PARPRR
Trigger: TCGGCGCGGGCGAGCCGGGCAGGCCGACGCTAAACC...CTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR GCA 90 bp CCCAGGAAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTGCTTGGCTGGGTTAGCCCAGCTGCCCACTaGCAATGCCGATGCCCTCCA +
Preference number: 2 (lower is better)
Translates to: PRKDSGVRQARASLLGWVSPAAH*QCRCPP
Trigger: TGGAGGGCATCGGCATTGGCAGTGGGCAGCTGGGCT...AACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTTCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR CCA 90 bp GTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGTCGAGACCCGGCTAGCTCCCGGGCCGTaGTCCGCGTCCAGCTTCCAG +
Preference number: 2 (lower is better)
Translates to: VQLQFPKQPVIHAVVETRLAPGP*SASSFQ
Trigger: CTGGAAGCTGGACGCGGACCACGGCCCGGGAGCTAG...CCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268933.8
ENST00000512379.5
3UTR-3UTR CCA 90 bp GGATACCAGCCGCCACTGGCTCGGCGTTCCACTAGCACCGGCGCCCCGCCCAGCCCTCCTTGGTCTCTGTaGATTCTGGAGGTTTGGCAA +
Preference number: 2 (lower is better)
Translates to: GYQPPLARRSTSTGAPPSPPWSL*ILEVWQ
Trigger: TTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGG...GCTGGGCGGGGCGCCGGTGCTAGTGGAACGCCGAGCCAGTGGCGGCTGGTATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
3UTR-3UTR CCA 90 bp AGCTCGGCGTGGGCAGCAGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACATTTTGCTTGGAACTaGGGCTGGGGTCTCCAAACA +
Preference number: 2 (lower is better)
Translates to: SSAWAAAAAVRRLRPAGRHFAWN*GWGLQT
Trigger: TGTTTGGAGACCCCAGCCCCAGTTCCAAGCAAAATG...TCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTGCTGCCCACGCCGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp GTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCACTTGAGCCGGTGCGCATCTaGTTTAGCGTCGGCCTGCCC +
Preference number: 2 (lower is better)
Translates to: VIHAVVETRPPHPAKSPLEPVRI*FSVGLP
Trigger: GGGCAGGCCGACGCTAAACCAGATGCGCACCGGCTC...AAGTGGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512379.5
ENST00000537145.2
3UTR CAA 90 bp GAGGGACCCAGGAAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTaGCTTGGCTGGGTTAGTGCTTCCCCTAGTATGCCCAGGTCCAGG +
Preference number: 2 (lower is better)
Translates to: EGPRKDSGVRQARAS*LGWVSASPSMPRSR
Trigger: CCTGGACCTGGGCATACTAGGGGAAGCACTAACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTTCCTGGGTCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR TCA 90 bp AGCTCGGCGTGGGCAGCAGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGAAAAAAGTCCACTTGGTaGGAGCTGAGAACGAGGGTT +
Preference number: 2 (lower is better)
Translates to: SSAWAAAAAVRRLRPAGRKKSTW*ELRTRV
Trigger: AACCCTCGTTCTCAGCTCTCACCAAGTGGACTTTTT...TCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTGCTGCCCACGCCGAGCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000512379.5
ENST00000537145.2
3UTR-3UTR TCA 90 bp TGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGGAAGCTGAGGGACCCGGCTCTCTGTCCCGCTaGTGGTGGACCACGGCCCCT +
Preference number: 2 (lower is better)
Translates to: WGALTNESRLTKEEAEGPGSLSR*WWTTAP
Trigger: AGGGGCCGTGGTCCACCATCAGCGGGACAGAGAGCC...GGGTCCCTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR TCA 90 bp GGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGGGAGGCTCCCCAAGGGTCCCAACGAGTCAAGGTTaGCCAAGGAGGAAGCTGAGG +
Preference number: 2 (lower is better)
Translates to: GRGTTRCVGGLQGGSPRVPTSQG*PRRKLR
Trigger: CCTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGG...GACCCTTGGGGAGCCTCCCTGGAGACCTCCGACACACCTGGTGGTGCCTCGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR GCA 90 bp AGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGGAACTGGGGCTGGGGCGGAGACCAGGGGTCTaGAGAAGGCCCCCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: RSRASGSFVPFCLELGLGRRPGV*RRPPGG
Trigger: TCCTCCTGGGGGCCTTCTGCAGACCCCTGGTCTCCG...CCCCAGCCCCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp GGATACCAGCCGCCACTGGCTCGGCGTTCCACTAGCACCGGCGCCCCGCCCAGCGTTCGGCCTAAAACCTaGCTGGTTTTTAGCTTCTCC +
Preference number: 2 (lower is better)
Translates to: GYQPPLARRSTSTGAPPSVRPKT*LVFSFS
Trigger: GGAGAAGCTAAAAACCAGCCAGGTTTTAGGCCGAAC...GCTGGGCGGGGCGCCGGTGCTAGTGGAACGCCGAGCCAGTGGCGGCTGGTATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510045.5
3UTR-3UTR CCA 90 bp TCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGCCCAGCAGGCAGCACTaGGGTCCTGCCCCAGGGCTC +
Preference number: 2 (lower is better)
Translates to: SGGLANGSKVEAPPGVSEPSRQH*GPAPGL
Trigger: GAGCCCTGGGGCAGGACCCCAGTGCTGCCTGCTGGG...CTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp CCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGAGGGTCAAGCCAGCTGGCACGCCTCCTTGGTCTCTGTaGATTCTGGAGGTTTGGCAA +
Preference number: 2 (lower is better)
Translates to: PACGKTLTEAGRVKPAGTPPWSL*ILEVWQ
Trigger: TTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGG...CGTGCCAGCTGGCTTGACCCTCCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp GTGGTCCGCGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCCATTTTGCTTGGAACTaGGGCTGGGGTCTCCAAACA +
Preference number: 2 (lower is better)
Translates to: VVRVQLPEPPRDTSRHWLHFAWN*GWGLQT
Trigger: TGTTTGGAGACCCCAGCCCCAGTTCCAAGCAAAATG...GAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACGCGGACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
3UTR-3UTR CCA 90 bp TGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGGAAGCTGAGGGACCCAGGCGCTGTAGGTCATaGAGCCCAGGGGCGCCCCCA +
Preference number: 2 (lower is better)
Translates to: WGALTNESRLTKEEAEGPRRCRS*SPGAPP
Trigger: TGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCCT...GGGTCCCTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp AAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTGCTTGGCTGGGTTAGTGCTGAGGGTCAAGCCAGCTaGCACGCTGCTGAGCGGGAG +
Preference number: 2 (lower is better)
Translates to: KDSGVRQARASLLGWVSAEGQAS*HAAERE
Trigger: CTCCCGCTCAGCAGCGTGCCAGCTGGCTTGACCCTC...AGCACTAACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp GCACCCCACGTTGTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGCTCAGAGGAAGGGGTTaGTGCCGGTCTGCGGGGGCG +
Preference number: 2 (lower is better)
Translates to: APHVVQLQFPKQPVIHAVLRGRG*CRSAGA
Trigger: CGCCCCCGCAGACCGGCACCAACCCCTTCCTCTGAG...CACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCACAACGTGGGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512379.5
3UTR CAA 90 bp CGTGCCCCTGGCTTGTCTACCCTGCTGCGCTCGAGCTCCTGGAGGTaGGATCCCTCCAAGGTGAGCCCAGCACTTTGTCCACAGCAGTCA +
Preference number: 2 (lower is better)
Translates to: RAPGLSTLLRSSSWR*DPSKVSPALCPQQS
Trigger: TGACTGCTGTGGACAAAGTGCTGGGCTCACCTTGGAGGGATCCAACCTCCAGGAGCTCGAGCGCAGCAGGGTAGACAAGCCAGGGGCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR GCA 90 bp TCGGCGTGGGCAGCAGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTTCCAGTCTTTATTATaGGGGCGTTCAGTTTCTAGC +
Preference number: 2 (lower is better)
Translates to: SAWAAAAAVRRLRPAGRRFQSLL*GRSVSS
Trigger: GCTAGAAACTGAACGCCCGCATAATAAAGACTGGAA...GCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTGCTGCCCACGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
3UTR-3UTR GCA 90 bp GTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCACTTATCTGGAAGCGAAGGTaGCTGGGTGACGGGGGATGG +
Preference number: 2 (lower is better)
Translates to: VIHAVVETRPPHPAKSPLIWKRR*LGDGGW
Trigger: CCATCCCCCGTCACCCAGGCACCTTCGCTTCCAGAT...AAGTGGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR GCA 90 bp ACCTCAGGAAGGGGAGTGGCATTGTGCCTCTCCACTCACCGACTCTGGTGGAAGGGGATGGAGGCTGGCTaGAGGCTGCCTGCAGAGCCA +
Preference number: 2 (lower is better)
Translates to: TSGRGVALCLSTHRLWWKGMEAG*RLPAEP
Trigger: TGGCTCTGCAGGCAGCCTGCAGCCAGCCTCCATCCC...CTTCCACCAGAGTCGGTGAGTGGAGAGGCACAATGCCACTCCCCTTCCTGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR GCA 90 bp GCTGGGTTAGTGCTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGGGGGAGCCATCACCCTaGCAGGACCTCACCTCCTTC +
Preference number: 2 (lower is better)
Translates to: AGLVLPLVCPGPGHLAPSGEPSP*QDLTSF
Trigger: GAAGGAGGTGAGGTCCTGGCAGGGTGATGGCTCCCC...CGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAGCACTAACCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR GCA 90 bp GGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCCGGAGACCAGGGGTCTaGAGAAGGCCCCCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: GLANGSKVEAPPGVSEVSRRPGV*RRPPGG
Trigger: TCCTCCTGGGGGCCTTCTGCAGACCCCTGGTCTCCG...GGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR GCA 90 bp GTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCACTTAAGGGTCAGCCCCAGTaGTGGGGAGTTTGTGGTGGG +
Preference number: 2 (lower is better)
Translates to: VIHAVVETRPPHPAKSPLKGQPQ*WGVCGG
Trigger: CCCACCACAAACTCCCCAGCACTGGGGCTGACCCTT...AAGTGGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000512379.5
ENST00000537145.2
3UTR-3UTR GCA 90 bp GCATGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCTGAGGGGAGTGCTTCCCCTAGTATaGCCAGGTCCAGGGCATCTG +
Preference number: 2 (lower is better)
Translates to: AWESDPRAGFGTGRFLRGVLPLV*PGPGHL
Trigger: CAGATGCCCTGGACCTGGGCATACTAGGGGAAGCAC...TCCCCTCAGGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp TATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGGAACTGGGCTAGCTCCCGGGCCGTaGTCCGCGTCCAGCTTCCAG +
Preference number: 2 (lower is better)
Translates to: YAQVQGIWLLRAILLGTGLAPGP*SASSFQ
Trigger: CTGGAAGCTGGACGCGGACCACGGCCCGGGAGCTAG...CCCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
3UTR-3UTR CCA 90 bp GTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGTCGAGACCCGGCGCATCACGTGCCCCTaGCTTGTCTACCCTGCTGCG +
Preference number: 2 (lower is better)
Translates to: VQLQFPKQPVIHAVVETRRITCP*LVYPAA
Trigger: CGCAGCAGGGTAGACAAGCCAGGGGCACGTGATGCG...CCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR CCA 90 bp CTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGAGGGTTGGATTCTGGAGGTTTaGCAAATGGGTCAAAGGTCG +
Preference number: 2 (lower is better)
Translates to: LRCEGSGLREDANRGGEGWILEV*QMGQRS
Trigger: CGACCTTTGACCCATTTGCCAAACCTCCAGAATCCA...ACCCTCCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp AAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTGCTTGGCTGGGTTAGTGCTTTGGTCTTGAGGGCGTaGGTTCGCTCCTGCCGCAGC +
Preference number: 2 (lower is better)
Translates to: KDSGVRQARASLLGWVSALVLRA*VRSCRS
Trigger: GCTGCGGCAGGAGCGAACCCACGCCCTCAAGACCAA...AGCACTAACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR TCA 90 bp CTTGGCTGGGTTAGTGCTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCGCTCGGAGCCCGTCTTaGGCAGGTAGTCCAGCAATG +
Preference number: 2 (lower is better)
Translates to: LGWVSASPSMPRSRASGSARSPS*AGSPAM
Trigger: CATTGCTGGACTACCTGCTCAAGACGGGCTCCGAGC...GGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAGCACTAACCCAGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR GCA 90 bp GCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTGTCAGGAAGGGGTTCCGCATCTGGCTCCTTCGTaGCATTTTGCTTGGAACTGG +
Preference number: 2 (lower is better)
Translates to: AERVGGGRSAETCQEGVPHLAPS*HFAWNW
Trigger: CCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATG...CGGAACCCCTTCCTGACAGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR GCA 90 bp CCTGCTCCAGGTCGGAGGTATAGCGGGGTGACGAAGAGGAGGAGTTGTAGGAGGGCCGATGCCCTCCAGTaGCATGCGCTCCTTGGTCTT +
Preference number: 2 (lower is better)
Translates to: PAPGRRYSGVTKRRSCRRADALQ*HALLGL
Trigger: AAGACCAAGGAGCGCATGGCACTGGAGGGCATCGGC...CCTCCTACAACTCCTCCTCTTCGTCACCCCGCTATACCTCCGACCTGGAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR CCA 90 bp AGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGGAACTGGGGCTGGGGGTCAGATCCCAGGGCTaGCTTCGGGACAGGACGGTT +
Preference number: 2 (lower is better)
Translates to: RSRASGSFVPFCLELGLGVRSQG*LRDRTV
Trigger: AACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGAC...CCCCAGCCCCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp TTTGCAACCTGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGGAAGCTCCCAGCAGGCAGCACTaGGGTCCTGCCCCAGGGCTC +
Preference number: 2 (lower is better)
Translates to: FATWGALTNESRLTKEEAPSRQH*GPAPGL
Trigger: GAGCCCTGGGGCAGGACCCCAGTGCTGCCTGCTGGG...AGCTTCCTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp AGCCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCCCCAGGGGTCTGTGGTaGGGGGCCCAGCAGGCAGCA +
Preference number: 2 (lower is better)
Translates to: SPSLVSVDSGGLANGSKVPRGLW*GAQQAA
Trigger: TGCTGCCTGCTGGGCCCCCCACCACAGACCCCTGGG...GACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp TGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGGAAGCTGAGGGACCCGGTCAGCCCCAGTGCTaGGGAGTTTGTGGTGGGGAG +
Preference number: 2 (lower is better)
Translates to: WGALTNESRLTKEEAEGPGQPQC*GVCGGE
Trigger: CTCCCCACCACAAACTCCCCAGCACTGGGGCTGACC...GGGTCCCTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp TTCGGGACAGGACGGTTCCTGAGGGGATCGGAGACCAGGGGTCTGCAGAAGGCCACCTGGGATGTCCCATaGGTCAGCAGAGCAGTGTGT +
Preference number: 2 (lower is better)
Translates to: FGTGRFLRGSETRGLQKATWDVP*VSRAVC
Trigger: ACACACTGCTCTGCTGACCCATGGGACATCCCAGGT...GGCCTTCTGCAGACCCCTGGTCTCCGATCCCCTCAGGAACCGTCCTGTCCCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR TCA 90 bp ACCCCCACCTCAGGAAGGGGAGTGGCATTGTGCCTCTCCACTCACCGACTCTGGCCACTTGGTGAGAGCTaGGAACGAGGGTTCCAGTCT +
Preference number: 2 (lower is better)
Translates to: TPTSGRGVALCLSTHRLWPLGES*ERGFQS
Trigger: AGACTGGAACCCTCGTTCTCAGCTCTCACCAAGTGG...CCAGAGTCGGTGAGTGGAGAGGCACAATGCCACTCCCCTTCCTGAGGTGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR TCA 90 bp ACTTGGCTTCTGCCACAGCCGCATCACGTGCCCCTGGCTTGTCTACCCTGCTGCTTCCTAAACAGCCGGTaGTCCACGCTGTGGTCGAGA +
Preference number: 2 (lower is better)
Translates to: TWLLPQPHHVPLACLPCCFLNSR*STLWSR
Trigger: TCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAA...GCAGCAGGGTAGACAAGCCAGGGGCACGTGATGCGGCTGTGGCAGAAGCCAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR GCA 90 bp CCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGAGGGTCAAGCCAGCTGGCACGTTCCAGTCTTTATTATaGGGGCGTTCAGTTTCTAGC +
Preference number: 2 (lower is better)
Translates to: PACGKTLTEAGRVKPAGTFQSLL*GRSVSS
Trigger: GCTAGAAACTGAACGCCCGCATAATAAAGACTGGAA...CGTGCCAGCTGGCTTGACCCTCCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
3UTR-3UTR GCA 90 bp GCTCCAGCCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAACCAGCTCCACAGGGCTaGTGGGCTTCCCAGAGGGCA +
Preference number: 2 (lower is better)
Translates to: APAPPWSLWILEVWQMGQPAPQG*WASQRA
Trigger: TGCCCTCTGGGAAGCCCAGCAGCCCTGTGGAGCTGG...TTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGGCTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR GCA 90 bp CCCAGGAAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTGCTTGGCTGGGTTCTTTGCAACCTGGGGTaGCTTGACCAACGAGTCAAG +
Preference number: 2 (lower is better)
Translates to: PRKDSGVRQARASLLGWVLCNLG*LDQRVK
Trigger: CTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAAG...AACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR GCA 90 bp GCCAGGGCAGGTACGAAGATGTCAGCCAAGTCCAGGATGGAGGACTGGCTGGTTAGCAGGGCCATCACCTaGTTGACCTTCTCGCGCACG +
Preference number: 2 (lower is better)
Translates to: ARAGTKMSAKSRMEDWLVSRAIT*LTFSRT
Trigger: CGTGCGCGAGAAGGTCAAGCAGGTGATGGCCCTGCT...AACCAGCCAGTCCTCCATCCTGGACTTGGCTGACATCTTCGTACCTGCCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512379.5
3UTR-3UTR GCA 90 bp CCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGGCGTGGGTTCGCTCCTaGCGCAGCCGCTCCTCATCC +
Preference number: 2 (lower is better)
Translates to: PPWSLWILEVWQMGQRSRAWVRS*RSRSSS
Trigger: GGATGAGGAGCGGCTGCGGCAGGAGCGAACCCACGC...CCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR GCA 90 bp GCACCCCACGTTGTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGCCGATGCCCTCCAGTaGCATGCGCTCCTTGGTCTT +
Preference number: 2 (lower is better)
Translates to: APHVVQLQFPKQPVIHAVADALQ*HALLGL
Trigger: AAGACCAAGGAGCGCATGGCACTGGAGGGCATCGGC...CACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCACAACGTGGGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512379.5
3UTR-3UTR CCA 90 bp TCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGCTGCACCATTGGCCATaGGGGAGCCATCACCCTGCC +
Preference number: 2 (lower is better)
Translates to: SPSMPRSRASGSFVPFCLLHHWP*GSHHPA
Trigger: GGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAG...CAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR CCA 90 bp GTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGGTCAGCCCCAGTGCTaGGGAGTTTGTGGTGGGGAG +
Preference number: 2 (lower is better)
Translates to: VWQMGQRSRHHQVCRRSPGQPQC*GVCGGE
Trigger: CTCCCCACCACAAACTCCCCAGCACTGGGGCTGACC...TGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR CAA 90 bp ACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCACTaGGTGAGAGCTGAGAACGAGGGTTCCAGTCTTTATTATGCGGGC +
Preference number: 2 (lower is better)
Translates to: TLWSRPGRHTPQKVH*VRAENEGSSLYYAG
Trigger: GCCCGCATAATAAAGACTGGAACCCTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
3UTR CAA 90 bp AGACCTGTCAGGAAGGGGTTCCGGGTCTTTGCAACCTGGGGTGCCTaGACCAACGAGTCAAGGTTGACCAAGGAGGAAGCTGAGGGACCC +
Preference number: 2 (lower is better)
Translates to: RPVRKGFRVFATWGA*TNESRLTKEEAEGP
Trigger: GGGTCCCTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAAGACCCGGAACCCCTTCCTGACAGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR GCA 90 bp ACCCCCACCTCAGGAAGGGGAGTGGCATTGTGCCTCTCCACTCACCGACTCTGGAAGGTGAGATACCTGTaGAATCGCACTGCAGTGGGC +
Preference number: 2 (lower is better)
Translates to: TPTSGRGVALCLSTHRLWKVRYL*NRTAVG
Trigger: GCCCACTGCAGTGCGATTGCACAGGTATCTCACCTT...CCAGAGTCGGTGAGTGGAGAGGCACAATGCCACTCCCCTTCCTGAGGTGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR GCA 90 bp GCTCCAGCCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAGGGGAGCCATCACCCTaGCAGGACCTCACCTCCTTC +
Preference number: 2 (lower is better)
Translates to: APAPPWSLWILEVWQMGQGEPSP*QDLTSF
Trigger: GAAGGAGGTGAGGTCCTGGCAGGGTGATGGCTCCCC...TTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGGCTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR GCA 90 bp GCATGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCTGAGGGGACATCTGGCTCCTTCGTaGCATTTTGCTTGGAACTGG +
Preference number: 2 (lower is better)
Translates to: AWESDPRAGFGTGRFLRGHLAPS*HFAWNW
Trigger: CCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATG...TCCCCTCAGGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp AGTCTTTATTATGCGGGCGTTCAGTTTCTAGCTCCCGGGCCGTGGTCCGCGTCCCATAGGGGCCCCTCCTaGATTGAGTACCAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: SLYYAGVQFLAPGPWSASHRGPS*IEYQAS
Trigger: TGAGGCCTGGTACTCAATCCAGGAGGGGCCCCTATG...GGACGCGGACCACGGCCCGGGAGCTAGAAACTGAACGCCCGCATAATAAAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR CCA 90 bp TCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGGTGCTGGGGAGTTTGTaGTGGGGAGAGTTCAGGGCC +
Preference number: 2 (lower is better)
Translates to: SPSMPRSRASGSFVPFCLVLGSL*WGEFRA
Trigger: GGCCCTGAACTCTCCCCACCACAAACTCCCCAGCAC...CAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp AACGAGGGTTCCAGTCTTTATTATGCGGGCGTTCAGTTTCTAGCTCCCGGGCCGGGTCAGCCCCAGTGCTaGGGAGTTTGTGGTGGGGAG +
Preference number: 2 (lower is better)
Translates to: NEGSSLYYAGVQFLAPGPGQPQC*GVCGGE
Trigger: CTCCCCACCACAAACTCCCCAGCACTGGGGCTGACC...CGGCCCGGGAGCTAGAAACTGAACGCCCGCATAATAAAGACTGGAACCCTCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
3UTR-3UTR CCA 90 bp TTCGGGACAGGACGGTTCCTGAGGGGATCGGAGACCAGGGGTCTGCAGAAGGCCGGTCTCTGTGGATTCTaGAGGTTTGGCAAATGGGTC +
Preference number: 2 (lower is better)
Translates to: FGTGRFLRGSETRGLQKAGLCGF*RFGKWV
Trigger: GACCCATTTGCCAAACCTCCAGAATCCACAGAGACC...GGCCTTCTGCAGACCCCTGGTCTCCGATCCCCTCAGGAACCGTCCTGTCCCGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR TCA 90 bp AGTCTTTATTATGCGGGCGTTCAGTTTCTAGCTCCCGGGCCGTGGTCCGCGTCCTTCCTAAACAGCCGGTaGTCCACGCTGTGGTCGAGA +
Preference number: 2 (lower is better)
Translates to: SLYYAGVQFLAPGPWSASFLNSR*STLWSR
Trigger: TCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAA...GGACGCGGACCACGGCCCGGGAGCTAGAAACTGAACGCCCGCATAATAAAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
3UTR-3UTR TCA 90 bp TTTGCAACCTGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGGAAGCTTGCGCTCCTTGGTCTTaGGGGCGTGGGTTCGCTCCT +
Preference number: 2 (lower is better)
Translates to: FATWGALTNESRLTKEEACAPWS*GRGFAP
Trigger: AGGAGCGAACCCACGCCCTCAAGACCAAGGAGCGCA...AGCTTCCTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR GCA 90 bp GATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGAGCAGGGCCATCACCTaGTTGACCTTCTCGCGCACG +
Preference number: 2 (lower is better)
Translates to: DSGGLANGSKVEAPPGVSSRAIT*LTFSRT
Trigger: CGTGCGCGAGAAGGTCAAGCAGGTGATGGCCCTGCT...CGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR GCA 90 bp TTTGCAACCTGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGGAAGCTAGCCCAGCTGCCCACTaGCAATGCCGATGCCCTCCA +
Preference number: 2 (lower is better)
Translates to: FATWGALTNESRLTKEEASPAAH*QCRCPP
Trigger: TGGAGGGCATCGGCATTGGCAGTGGGCAGCTGGGCT...AGCTTCCTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR CCA 90 bp TCTGAGCCACGGTTTCCTTGCCTGAAAAATGGGAGTAGTGCCGGCTGCAAGGTGGATACCAGCCGCCACTaGCTCGGCGTTCCACTAGCA +
Preference number: 2 (lower is better)
Translates to: SEPRFPCLKNGSSAGCKVDTSRH*LGVPLA
Trigger: TGCTAGTGGAACGCCGAGCCAGTGGCGGCTGGTATC...CACCTTGCAGCCGGCACTACTCCCATTTTTCAGGCAAGGAAACCGTGGCTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR CCA 90 bp AGCCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCCTGCACCATTGGCCATaGGGGAGCCATCACCCTGCC +
Preference number: 2 (lower is better)
Translates to: SPSLVSVDSGGLANGSKVLHHWP*GSHHPA
Trigger: GGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAG...GACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR CCA 90 bp GTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCACTTGGTCTCTGTGGATTCTaGAGGTTTGGCAAATGGGTC +
Preference number: 2 (lower is better)
Translates to: VIHAVVETRPPHPAKSPLGLCGF*RFGKWV
Trigger: GACCCATTTGCCAAACCTCCAGAATCCACAGAGACC...AAGTGGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512379.5
ENST00000537145.2
3UTR-3UTR CCA 90 bp TCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGCGGGTCTTTGCAACCTaGGGTGCCTTGACCAACGAG +
Preference number: 2 (lower is better)
Translates to: SGGLANGSKVEAPPGVSERVFAT*GALTNE
Trigger: CTCGTTGGTCAAGGCACCCCAGGTTGCAAAGACCCG...CTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp TTGCTTGGAACTGGGGCTGGGGTCTCCAAACAGGTCCAGCTCCACAGGGCTGCTTCGCGGTCGATGTACTaGAAGTCCTTGAGTGTCTGG +
Preference number: 2 (lower is better)
Translates to: LLGTGAGVSKQVQLHRAASRSMY*KSLSVW
Trigger: CCAGACACTCAAGGACTTCCAGTACATCGACCGCGA...AGCAGCCCTGTGGAGCTGGACCTGTTTGGAGACCCCAGCCCCAGTTCCAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR GCA 90 bp TCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTAAGGGTCAGCCCCAGTaGTGGGGAGTTTGTGGTGGG +
Preference number: 2 (lower is better)
Translates to: SVDSGGLANGSKVEAPPGKGQPQ*WGVCGG
Trigger: CCCACCACAAACTCCCCAGCACTGGGGCTGACCCTT...ACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR GCA 90 bp CCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGACACTGCCAATGCCGATaGCCTCCAGTGCCATGCGCT +
Preference number: 2 (lower is better)
Translates to: PLLGLCGFWRFGKWVKGRHCQCR*PPVPCA
Trigger: AGCGCATGGCACTGGAGGGCATCGGCATTGGCAGTG...TCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR CCA 90 bp CCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGGTGCTGGGGAGTTTGTaGTGGGGAGAGTTCAGGGCC +
Preference number: 2 (lower is better)
Translates to: PPWSLWILEVWQMGQRSRVLGSL*WGEFRA
Trigger: GGCCCTGAACTCTCCCCACCACAAACTCCCCAGCAC...CCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp CGGGTCTTTGCAACCTGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGCAGGTCCAGGGCATCTaGCTCCTTCGTGCCATTTTG +
Preference number: 2 (lower is better)
Translates to: RVFATWGALTNESRLTKEQVQGI*LLRAIL
Trigger: CAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTG...CTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAAGACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp TGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGGAAGCTGAGGGACCCGCCTCTTTGCTTGGCTaGGTTAGTGCTTCCCCTAGT +
Preference number: 2 (lower is better)
Translates to: WGALTNESRLTKEEAEGPASLLG*VSASPS
Trigger: ACTAGGGGAAGCACTAACCCAGCCAAGCAAAGAGGC...GGGTCCCTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp TCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGACCTGGGATGTCCCATaGGTCAGCAGAGCAGTGTGT +
Preference number: 2 (lower is better)
Translates to: SGGLANGSKVEAPPGVSETWDVP*VSRAVC
Trigger: ACACACTGCTCTGCTGACCCATGGGACATCCCAGGT...CTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp TCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTTCGGCCTAAAACCTaGGATGTCCCATGGGTCAGC +
Preference number: 2 (lower is better)
Translates to: SGGLANGSKVEAPPGVSEVRPKT*DVPWVS
Trigger: GCTGACCCATGGGACATCCCAGGTTTTAGGCCGAAC...CTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR TCA 90 bp CCTGTGTGGCTAAGACTGAGTTTCTCGCTAGCCTTGGCGAAGCAAGGGAGAGGGAATGACCGAATTGAGTaGCAGCCTGGCAGCATCTGG +
Preference number: 2 (lower is better)
Translates to: PVWLRLSFSLALAKQGRGNDRIE*QPGSIW
Trigger: CCAGATGCTGCCAGGCTGTCACTCAATTCGGTCATT...CCCTCTCCCTTGCTTCGCCAAGGCTAGCGAGAAACTCAGTCTTAGCCACACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR GCA 90 bp TCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGCTTCCCCTAGTATaGCCAGGTCCAGGGCATCTG +
Preference number: 2 (lower is better)
Translates to: SVDSGGLANGSKVEAPPGVLPLV*PGPGHL
Trigger: CAGATGCCCTGGACCTGGGCATACTAGGGGAAGCAC...ACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp TCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGTGGAGGTTTGGCAAATaGGTCAAAGGTCGAGGCACC +
Preference number: 2 (lower is better)
Translates to: SPSMPRSRASGSFVPFCLWRFGK*VKGRGT
Trigger: GGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCA...CAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp TTGCTTGGAACTGGGGCTGGGGTCTCCAAACAGGTCCAGCTCCACAGGGCTGCTTGGATTCTGGAGGTTTaGCAAATGGGTCAAAGGTCG +
Preference number: 2 (lower is better)
Translates to: LLGTGAGVSKQVQLHRAAWILEV*QMGQRS
Trigger: CGACCTTTGACCCATTTGCCAAACCTCCAGAATCCA...AGCAGCCCTGTGGAGCTGGACCTGTTTGGAGACCCCAGCCCCAGTTCCAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp CAGCCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGGGTCTTTGCAACCTaGGGTGCCTTGACCAACGAG +
Preference number: 2 (lower is better)
Translates to: QPLLGLCGFWRFGKWVKGRVFAT*GALTNE
Trigger: CTCGTTGGTCAAGGCACCCCAGGTTGCAAAGACCCG...ACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR TCA 90 bp TTTGCAACCTGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGGAAGCTCCACTTGGTGAGAGCTaGGAACGAGGGTTCCAGTCT +
Preference number: 2 (lower is better)
Translates to: FATWGALTNESRLTKEEAPLGES*ERGFQS
Trigger: AGACTGGAACCCTCGTTCTCAGCTCTCACCAAGTGG...AGCTTCCTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512379.5
ENST00000537145.2
3UTR-3UTR TCA 90 bp CCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGTTCCTAAACAGCCGGTaGTCCACGCTGTGGTCGAGA +
Preference number: 2 (lower is better)
Translates to: PPWSLWILEVWQMGQRSRFLNSR*STLWSR
Trigger: TCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAA...CCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512379.5
ENST00000537145.2
3UTR-3UTR GCA 90 bp ACCCCCACCTCAGGAAGGGGAGTGGCATTGTGCCTCTCCACTCACCGACTCTGGTTCCAGTCTTTATTATaGGGGCGTTCAGTTTCTAGC +
Preference number: 2 (lower is better)
Translates to: TPTSGRGVALCLSTHRLWFQSLL*GRSVSS
Trigger: GCTAGAAACTGAACGCCCGCATAATAAAGACTGGAA...CCAGAGTCGGTGAGTGGAGAGGCACAATGCCACTCCCCTTCCTGAGGTGGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR GCA 90 bp CGGGTCTTTGCAACCTGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGTTGCACCCCACGTTGTaGAGCTGCAGTTTCCTAAAC +
Preference number: 2 (lower is better)
Translates to: RVFATWGALTNESRLTKELHPTL*SCSFLN
Trigger: GTTTAGGAAACTGCAGCTGCACAACGTGGGGTGCAA...CTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAAGACCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512379.5
ENST00000537145.2
3UTR-3UTR GCA 90 bp TTTGCAACCTGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGGAAGCTTCCTTCGTGCCATTTTaGTTGGAACTGGGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: FATWGALTNESRLTKEEASFVPF*LELGLG
Trigger: CCCCAGCCCCAGTTCCAAGCAAAATGGCACGAAGGA...AGCTTCCTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp TTTGCACCCCACGTTGTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTTGGAGGTTTGGCAAATaGGTCAAAGGTCGAGGCACC +
Preference number: 2 (lower is better)
Translates to: FAPHVVQLQFPKQPVIHAWRFGK*VKGRGT
Trigger: GGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCA...AGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCACAACGTGGGGTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512379.5
ENST00000537145.2
3UTR-3UTR CCA 90 bp GCTCCAGCCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAATGGAGGTTTGGCAAATaGGTCAAAGGTCGAGGCACC +
Preference number: 2 (lower is better)
Translates to: APAPPWSLWILEVWQMGQWRFGK*VKGRGT
Trigger: GGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCA...TTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGGCTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp CGGGTCTTTGCAACCTGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGGGTCTCTGTGGATTCTaGAGGTTTGGCAAATGGGTC +
Preference number: 2 (lower is better)
Translates to: RVFATWGALTNESRLTKEGLCGF*RFGKWV
Trigger: GACCCATTTGCCAAACCTCCAGAATCCACAGAGACC...CTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAAGACCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp CTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTCCTCCTTGGTCTCTGTaGATTCTGGAGGTTTGGCAA +
Preference number: 2 (lower is better)
Translates to: LPLVCPGPGHLAPSCHFAPPWSL*ILEVWQ
Trigger: TTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGG...AGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp TTTGCAACCTGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGGAAGCTCAGGTCCAGGGCATCTaGCTCCTTCGTGCCATTTTG +
Preference number: 2 (lower is better)
Translates to: FATWGALTNESRLTKEEAQVQGI*LLRAIL
Trigger: CAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTG...AGCTTCCTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR TCA 90 bp CCTGTGTGGCTAAGACTGAGTTTCTCGCTAGCCTTGGCGAAGCAAGGGAGAGGGAAAAAGTCCACTTGGTaGGAGCTGAGAACGAGGGTT +
Preference number: 2 (lower is better)
Translates to: PVWLRLSFSLALAKQGRGKKSTW*ELRTRV
Trigger: AACCCTCGTTCTCAGCTCTCACCAAGTGGACTTTTT...CCCTCTCCCTTGCTTCGCCAAGGCTAGCGAGAAACTCAGTCTTAGCCACACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR GCA 90 bp CAGCCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTAAGCTCGGGCCTCTTTaGTTGGCTGGGTTAGTGCTT +
Preference number: 2 (lower is better)
Translates to: QPLLGLCGFWRFGKWVKGKLGPL*LAGLVL
Trigger: AAGCACTAACCCAGCCAAGCAAAGAGGCCCGAGCTT...ACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR GCA 90 bp TTTGCAACCTGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGGAAGCTCTTTGCAACCTGGGGTaGCTTGACCAACGAGTCAAG +
Preference number: 2 (lower is better)
Translates to: FATWGALTNESRLTKEEALCNLG*LDQRVK
Trigger: CTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAAG...AGCTTCCTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp CAGCCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTTCGCGGTCGATGTACTaGAAGTCCTTGAGTGTCTGG +
Preference number: 2 (lower is better)
Translates to: QPLLGLCGFWRFGKWVKGSRSMY*KSLSVW
Trigger: CCAGACACTCAAGGACTTCCAGTACATCGACCGCGA...ACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR GCA 90 bp CTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCTTGCACCCCACGTTGTaGAGCTGCAGTTTCCTAAAC +
Preference number: 2 (lower is better)
Translates to: LGLCGFWRFGKWVKGRGTLHPTL*SCSFLN
Trigger: GTTTAGGAAACTGCAGCTGCACAACGTGGGGTGCAA...GGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512379.5
ENST00000537145.2
3UTR-3UTR GCA 90 bp TCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTCATCTGGCTCCTTCGTaGCATTTTGCTTGGAACTGG +
Preference number: 2 (lower is better)
Translates to: SVDSGGLANGSKVEAPPGHLAPS*HFAWNW
Trigger: CCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATG...ACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR GCA 90 bp TTTGCAACCTGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGGAAGCTCATCTGGCTCCTTCGTaGCATTTTGCTTGGAACTGG +
Preference number: 2 (lower is better)
Translates to: FATWGALTNESRLTKEEAHLAPS*HFAWNW
Trigger: CCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATG...AGCTTCCTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CCA 90 bp TTTGCAACCTGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGGAAGCTGGTCTCTGTGGATTCTaGAGGTTTGGCAAATGGGTC +
Preference number: 2 (lower is better)
Translates to: FATWGALTNESRLTKEEAGLCGF*RFGKWV
Trigger: GACCCATTTGCCAAACCTCCAGAATCCACAGAGACC...AGCTTCCTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR GCA 90 bp TCTGAGCCACGGTTTCCTTGCCTGAAAAATGGGAGTAGTGCCGGCTGCAAGGTGTTAGCCCAACCCCAGTaGCCATGTGTGATAAATGAA +
Preference number: 2 (lower is better)
Translates to: SEPRFPCLKNGSSAGCKVLAQPQ*PCVINE
Trigger: TTCATTTATCACACATGGGCACTGGGGTTGGGCTAA...CACCTTGCAGCCGGCACTACTCCCATTTTTCAGGCAAGGAAACCGTGGCTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR CCA 90 bp GTGATTCTTGTTAGGGTCAAACCTTGGAGCAGAACTTTGAACCCTGTAAGTCTGCCTCAGGAAGGGGAGTaGCATTGTGCCTCTCCACTC +
Preference number: 2 (lower is better)
Translates to: VILVRVKPWSRTLNPVSLPQEGE*HCASPL
Trigger: GAGTGGAGAGGCACAATGCCACTCCCCTTCCTGAGG...CAGACTTACAGGGTTCAAAGTTCTGCTCCAAGGTTTGACCCTAACAAGAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR CAA 90 bp AGCAGAACTTTGAACCCTGTAAGTCTGACTCCTGAGCAGGTGTTCTaGTCCATCCTGTTTGTAACTGCATTGTGGGACTCCCTTCCCCTA +
Preference number: 2 (lower is better)
Translates to: SRTLNPVSLTPEQVF*SILFVTALWDSLPL
Trigger: TAGGGGAAGGGAGTCCCACAATGCAGTTACAAACAGGATGGACAAGAACACCTGCTCAGGAGTCAGACTTACAGGGTTCAAAGTTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR GCA 90 bp TTTGCAACCTGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGGAAGCTTTCCAGTCTTTATTATaGGGGCGTTCAGTTTCTAGC +
Preference number: 2 (lower is better)
Translates to: FATWGALTNESRLTKEEAFQSLL*GRSVSS
Trigger: GCTAGAAACTGAACGCCCGCATAATAAAGACTGGAA...AGCTTCCTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
3UTR-3UTR GCA 90 bp ATTCTTGTTAGGGTCAAACCTTGGAGCAGAACTTTGAACCCTGTAAGTCTGACTCCCACGTTGTGCAGCTaGAGTTTCCTAAACAGCCGG +
Preference number: 2 (lower is better)
Translates to: ILVRVKPWSRTLNPVSLTPTLCS*SFLNSR
Trigger: CCGGCTGTTTAGGAAACTGCAGCTGCACAACGTGGG...AGTCAGACTTACAGGGTTCAAAGTTCTGCTCCAAGGTTTGACCCTAACAAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR CAA 90 bp TGCTTAGCACGTAAGCAGTACCCAATAAATAGGAACAAAGGCCTATaGTCTCTTGCTGTTAGCCCAACCCCAGTGCCCATGTGTGATAAA +
Preference number: 2 (lower is better)
Translates to: CLARKQYPINRNKGL*SLAVSPTPVPMCDK
Trigger: TTTATCACACATGGGCACTGGGGTTGGGCTAACAGCAAGAGACAATAGGCCTTTGTTCCTATTTATTGGGTACTGCTTACGTGCTAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR CAA 90 bp GGGATCCTGAACGGAATTAACAATATTTTCTACCTCAGAGAGTCGTaGCAAGCATTAAATAAACTGATCTGCTTAGCACGTAAGCAGTAC +
Preference number: 2 (lower is better)
Translates to: GILNGINNIFYLRES*QALNKLICLARKQY
Trigger: GTACTGCTTACGTGCTAAGCAGATCAGTTTATTTAATGCTTGCAACGACTCTCTGAGGTAGAAAATATTGTTAATTCCGTTCAGGATCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR GCA 72 bp GGTCATGGAGCCCAGGGGCGCCCCCACAGGCCCGCCTaGCAGGCCCAGCGCCGGCGAGCCGGTGCGCATCTG +
Preference number: 3 (lower is better)
Translates to: GHGAQGRPHRPA*QAQRRRAGAHL
Trigger: CAGATGCGCACCGGCTCGCCGGCGCTGGGCCTGGCAGGCGGGCCTGTGGGGGCGCCCCTGGGCTCCATGACC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR GCA 72 bp CCGGCGAGCCGGTGCGCATCTGGTTTAGCGTCGGCCTaGCCGGCTCGCCCGCGCCGAACGGGTTGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: PASRCASGLASA*PARPRRTGWWG
Trigger: CCCCCACCAACCCGTTCGGCGCGGGCGAGCCGGGCAGGCCGACGCTAAACCAGATGCGCACCGGCTCGCCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR GCA 72 bp CGCGGCCCGGCTGAGCTCGGCGTGGGCAGCAGCGGCTaGGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTA +
Preference number: 3 (lower is better)
Translates to: RGPAELGVGSSG*GAKAPACGKTL
Trigger: TAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTGCTGCCCACGCCGAGCTCAGCCGGGCCGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000574464.5
3UTR GCA 72 bp CGCGTCCCGGCTGAGCTCGGCGTGGGCAGCAGCGGCTaGGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTA +
Preference number: 3 (lower is better)
Translates to: RVPAELGVGSSG*GAKAPACGKTL
Trigger: TAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTGCTGCCCACGCCGAGCTCAGCCGGGACGCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537145.2
3UTR CCA 72 bp CAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTaGCTCGGCGTTCCACTAGCACCGGCGCCCCGCCCA +
Preference number: 3 (lower is better)
Translates to: QLPEPPRDTSRH*LGVPLAPAPRP
Trigger: TGGGCGGGGCGCCGGTGCTAGTGGAACGCCGAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
3UTR-3UTR CAA 90 bp CTGCCCGGCTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTACGGCCCCTGCACCATaGGCCATGGGGGAGCCATCA +
Preference number: 3 (lower is better)
Translates to: LPGSPAPNGLVGDGALRPTAPAP*AMGEPS
Trigger: TGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGT...AGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAGCCGGGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
3UTR GCA 72 bp GTGGGCAGCAGCGGCTGCGGTGCGAAGGCTCCGGCCTaGGGGAAGACGCTAACCGAGGCGGGGAGGGTCAAG +
Preference number: 3 (lower is better)
Translates to: VGSSGCGAKAPA*GKTLTEAGRVK
Trigger: CTTGACCCTCCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTGCTGCCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CAA 90 bp TCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCGGCGTTCCACGCTCAGAGGAAGGGGTaGGTGCCGGTCTGCGGGGGC +
Preference number: 3 (lower is better)
Translates to: SSFQSRRGIPAATGSAFHAQRKG*VPVCGG
Trigger: GCCCCCGCAGACCGGCACCAACCCCTTCCTCTGAGC...GTGGAACGCCGAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
3UTR-3UTR CAA 90 bp CCCAGGAAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTGCTTGGCTGGGTTCCCGCGCCGAACGGGTaGGTGGGGGACGGAGCGCTG +
Preference number: 3 (lower is better)
Translates to: PRKDSGVRQARASLLGWVPAPNG*VGDGAL
Trigger: CAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGG...AACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTTCCTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CAA 90 bp TCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCGGCGTTCCACGGAAGCGGGGCAGTTTaGCACCCCACGTTGTGCAGC +
Preference number: 3 (lower is better)
Translates to: SSFQSRRGIPAATGSAFHGSGAV*HPTLCS
Trigger: GCTGCACAACGTGGGGTGCAAAACTGCCCCGCTTCC...GTGGAACGCCGAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR CAA 90 bp GGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGGGAGGCTCCCCAAGGGTCACGGCCCCTGCACCATaGGCCATGGGGGAGCCATCA +
Preference number: 3 (lower is better)
Translates to: GRGTTRCVGGLQGGSPRVTAPAP*AMGEPS
Trigger: TGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGT...GACCCTTGGGGAGCCTCCCTGGAGACCTCCGACACACCTGGTGGTGCCTCGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR CAA 90 bp AGCTCGGCGTGGGCAGCAGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACTCCTTCGTGCCATTTaGCTTGGAACTGGGGCTGGG +
Preference number: 3 (lower is better)
Translates to: SSAWAAAAAVRRLRPAGRLLRAI*LGTGAG
Trigger: CCCAGCCCCAGTTCCAAGCAAAATGGCACGAAGGAG...TCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTGCTGCCCACGCCGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CAA 90 bp CAGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGCAACCTGGGGTGCCTaGACCAACGAGTCAAGGTTG +
Preference number: 3 (lower is better)
Translates to: QRLRCEGSGLREDANRGGATWGA*TNESRL
Trigger: CAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGC...CCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CAA 90 bp CGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGAGGGTCAAAGCCGCTCCTCATCCTaGAGCAGGGCCATCACCTGC +
Preference number: 3 (lower is better)
Translates to: RCEGSGLREDANRGGEGQSRSSS*SRAITC
Trigger: GCAGGTGATGGCCCTGCTCAAGGATGAGGAGCGGCT...TTGACCCTCCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512379.5
3UTR-3UTR CAA 90 bp CCTGCCCGGCTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCGTGGATTCTGGAGGTTaGGCAAATGGGTCAAAGGTC +
Preference number: 3 (lower is better)
Translates to: PARLARAERVGGGRSAETVDSGG*ANGSKV
Trigger: GACCTTTGACCCATTTGCCAAACCTCCAGAATCCAC...GGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAGCCGGGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CAA 90 bp CCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGAGGGTCAAGCCAGCTGGCACGGCAACCTGGGGTGCCTaGACCAACGAGTCAAGGTTG +
Preference number: 3 (lower is better)
Translates to: PACGKTLTEAGRVKPAGTATWGA*TNESRL
Trigger: CAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGC...CGTGCCAGCTGGCTTGACCCTCCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CAA 90 bp CTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTGTCAGGAAAGGGCCATCACCTGCTaGACCTTCTCGCGCACGTTG +
Preference number: 3 (lower is better)
Translates to: LARAERVGGGRSAETCQERAITC*TFSRTL
Trigger: CAACGTGCGCGAGAAGGTCAAGCAGGTGATGGCCCT...TTCCTGACAGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR CAA 90 bp GCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTGTCAGGAAGGGGTTCCGAGCCGCTCCTCATCCTaGAGCAGGGCCATCACCTGC +
Preference number: 3 (lower is better)
Translates to: AERVGGGRSAETCQEGVPSRSSS*SRAITC
Trigger: GCAGGTGATGGCCCTGCTCAAGGATGAGGAGCGGCT...CGGAACCCCTTCCTGACAGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
3UTR GCA 72 bp GCCCAGCTGCCCACTGCCAATGCCGATGCCCTCCAGTaGCATGCGCTCCTTGGTCTTGAGGGCGTGGGTTCG +
Preference number: 3 (lower is better)
Translates to: AQLPTANADALQ*HALLGLEGVGS
Trigger: CGAACCCACGCCCTCAAGACCAAGGAGCGCATGGCACTGGAGGGCATCGGCATTGGCAGTGGGCAGCTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
3UTR CCA 72 bp GCTGATGGTGGACCACGGCCCCTGCACCATTGGCCATaGGGGAGCCATCACCCTGCCAGGACCTCACCTCCT +
Preference number: 3 (lower is better)
Translates to: ADGGPRPLHHWP*GSHHPARTSPP
Trigger: AGGAGGTGAGGTCCTGGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGTGGTCCACCATCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
3UTR CCA 72 bp TATTATGCGGGCGTTCAGTTTCTAGCTCCCGGGCCGTaGTCCGCGTCCCGGCTGAGCTCGGCGTGGGCAGCA +
Preference number: 3 (lower is better)
Translates to: YYAGVQFLAPGP*SASRLSSAWAA
Trigger: TGCTGCCCACGCCGAGCTCAGCCGGGACGCGGACCACGGCCCGGGAGCTAGAAACTGAACGCCCGCATAATA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537145.2
3UTR-3UTR CAA 90 bp CAGAGAGGCGCTGTAGGTCATGGAGCCCAGGGGCGCCCCCACAGGCCCGCCTGCCCGCAAAAAGTCCACTaGGTGAGAGCTGAGAACGAG +
Preference number: 3 (lower is better)
Translates to: QRGAVGHGAQGRPHRPACPQKVH*VRAENE
Trigger: CTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGG...GCAGGCGGGCCTGTGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCCTCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000512379.5
ENST00000537145.2
3UTR-3UTR CAA 90 bp CCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCATGGGAGCTCCTGCACTaGGCTTCTGCCACAGCCGCA +
Preference number: 3 (lower is better)
Translates to: PVIHAVVETRPPHPAKSPWELLH*ASATAA
Trigger: TGCGGCTGTGGCAGAAGCCAAGTGCAGGAGCTCCCA...TGGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR CAA 90 bp AGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGACCAACGAGTCAAGGTaGACCAAGGAGGAAGCTGAG +
Preference number: 3 (lower is better)
Translates to: SGCGAKAPACGKTLTEAGTNESR*TKEEAE
Trigger: CTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGGT...CCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR GCA 72 bp CAGCCGCATCACGTGCCCCTGGCTTGTCTACCCTGCTaGGCTCGAGCTCCTGGAGGTTGGATCCCTCCAAGG +
Preference number: 3 (lower is better)
Translates to: QPHHVPLACLPC*ARAPGGWIPPR
Trigger: CCTTGGAGGGATCCAACCTCCAGGAGCTCGAGCGCAGCAGGGTAGACAAGCCAGGGGCACGTGATGCGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR GCA 72 bp CCACAGCCGCATCACGTGCCCCTGGCTTGTCTACCCTaGTGCGCTCGAGCTCCTGGAGGTTGGATCCCTCCA +
Preference number: 3 (lower is better)
Translates to: PQPHHVPLACLP*CARAPGGWIPP
Trigger: TGGAGGGATCCAACCTCCAGGAGCTCGAGCGCAGCAGGGTAGACAAGCCAGGGGCACGTGATGCGGCTGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR CAA 90 bp CCGTGGTCCGCGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCGTGGATTCTGGAGGTTaGGCAAATGGGTCAAAGGTC +
Preference number: 3 (lower is better)
Translates to: PWSASSFQSRRGIPAATGVDSGG*ANGSKV
Trigger: GACCTTTGACCCATTTGCCAAACCTCCAGAATCCAC...GCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACGCGGACCACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
3UTR-3UTR CAA 90 bp CTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGAGGGTACCAACGAGTCAAGGTaGACCAAGGAGGAAGCTGAG +
Preference number: 3 (lower is better)
Translates to: LRCEGSGLREDANRGGEGTNESR*TKEEAE
Trigger: CTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGGT...ACCCTCCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR TCA 72 bp CCCACGTTGTGCAGCTGCAGTTTCCTAAACAGCCGGTaGTCCACGCTGTGGTCGAGACCCGGCCGCCACACC +
Preference number: 3 (lower is better)
Translates to: PTLCSCSFLNSR*STLWSRPGRHT
Trigger: GGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCACAACGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
3UTR CCA 72 bp TATTATGCGGGCGTTCAGTTTCTAGCTCCCGGGCCGTaGTCCGCGTCCAGCTTCCAGAGCCGCCGCGGGATA +
Preference number: 3 (lower is better)
Translates to: YYAGVQFLAPGP*SASSFQSRRGI
Trigger: TATCCCGCGGCGGCTCTGGAAGCTGGACGCGGACCACGGCCCGGGAGCTAGAAACTGAACGCCCGCATAATA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
3UTR CCA 72 bp GCCCCTGGCTTGTCTACCCTGCTGCGCTCGAGCTCCTaGAGGTTGGATCCCTCCAAGGTGAGCCCAGCACTT +
Preference number: 3 (lower is better)
Translates to: APGLSTLLRSSS*RLDPSKVSPAL
Trigger: AAGTGCTGGGCTCACCTTGGAGGGATCCAACCTCCAGGAGCTCGAGCGCAGCAGGGTAGACAAGCCAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR CAA 90 bp GCATGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCTGAGGGGACCAGTGCTGGGGAGTTaGTGGTGGGGAGAGTTCAGG +
Preference number: 3 (lower is better)
Translates to: AWESDPRAGFGTGRFLRGPVLGS*WWGEFR
Trigger: CCTGAACTCTCCCCACCACAAACTCCCCAGCACTGG...TCCCCTCAGGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CAA 90 bp CTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGAGGGTGTGGATTCTGGAGGTTaGGCAAATGGGTCAAAGGTC +
Preference number: 3 (lower is better)
Translates to: LRCEGSGLREDANRGGEGVDSGG*ANGSKV
Trigger: GACCTTTGACCCATTTGCCAAACCTCCAGAATCCAC...ACCCTCCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CAA 90 bp TTTGCAACCTGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGGAAGCTCCCGCGCCGAACGGGTaGGTGGGGGACGGAGCGCTG +
Preference number: 3 (lower is better)
Translates to: FATWGALTNESRLTKEEAPAPNG*VGDGAL
Trigger: CAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGG...AGCTTCCTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CAA 90 bp GCCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCCCGCAAAAAGTCCACTaGGTGAGAGCTGAGAACGAG +
Preference number: 3 (lower is better)
Translates to: AGDPRCGRDPAATPRKKSPQKVH*VRAENE
Trigger: CTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGG...GGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
3UTR-3UTR CAA 90 bp GCCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCAAGGCCTATTGTCTCTaGCTGTTAGCCCAACCCCAG +
Preference number: 3 (lower is better)
Translates to: AGDPRCGRDPAATPRKKSKAYCL*LLAQPQ
Trigger: CTGGGGTTGGGCTAACAGCAAGAGACAATAGGCCTT...GGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR TCA 72 bp CAGCCTGGGATCTCCAGGCCTTGGAGCCAGACTGTCTaGCTCTTGAGTTCCAGCCCCGCCCCATGCCAGCTT +
Preference number: 3 (lower is better)
Translates to: QPGISRPWSQTV*LLSSSPAPCQL
Trigger: AAGCTGGCATGGGGCGGGGCTGGAACTCAAGAGTCAGACAGTCTGGCTCCAAGGCCTGGAGATCCCAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR CAA 90 bp GCACCCCACGTTGTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGGAAGCGGGGCAGTTTaGCACCCCACGTTGTGCAGC +
Preference number: 3 (lower is better)
Translates to: APHVVQLQFPKQPVIHAVGSGAV*HPTLCS
Trigger: GCTGCACAACGTGGGGTGCAAAACTGCCCCGCTTCC...CACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCACAACGTGGGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268933.8
ENST00000537145.2
3UTR-3UTR CAA 90 bp TTCTCTCTTCTCTCTCAGGCTCTCTGTCCCGCTGATGGTGGACCACGGCCCCTGCCAGTGCTGGGGAGTTaGTGGTGGGGAGAGTTCAGG +
Preference number: 3 (lower is better)
Translates to: FSLLSQALCPADGGPRPLPVLGS*WWGEFR
Trigger: CCTGAACTCTCCCCACCACAAACTCCCCAGCACTGG...CAGGGGCCGTGGTCCACCATCAGCGGGACAGAGAGCCTGAGAGAGAAGAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR CAA 90 bp AGGAAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTGCTTGGCTGGGTTAGTCCAGTGCTGGGGAGTTaGTGGTGGGGAGAGTTCAGG +
Preference number: 3 (lower is better)
Translates to: RKDSGVRQARASLLGWVSPVLGS*WWGEFR
Trigger: CCTGAACTCTCCCCACCACAAACTCCCCAGCACTGG...ACTAACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CAA 90 bp AGGAGAGCATGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCTGCTCCTTCGTGCCATTTaGCTTGGAACTGGGGCTGGG +
Preference number: 3 (lower is better)
Translates to: RRAWESDPRAGFGTGRFLLLRAI*LGTGAG
Trigger: CCCAGCCCCAGTTCCAAGCAAAATGGCACGAAGGAG...CAGGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCATGCTCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CAA 90 bp GTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCACTTGCAACCTGGGGTGCCTaGACCAACGAGTCAAGGTTG +
Preference number: 3 (lower is better)
Translates to: VIHAVVETRPPHPAKSPLATWGA*TNESRL
Trigger: CAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGC...AAGTGGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000512379.5
ENST00000537145.2
3UTR-3UTR CAA 90 bp TTGCTTGGAACTGGGGCTGGGGTCTCCAAACAGGTCCAGCTCCACAGGGCTGCTAGGGCCATCACCTGCTaGACCTTCTCGCGCACGTTG +
Preference number: 3 (lower is better)
Translates to: LLGTGAGVSKQVQLHRAARAITC*TFSRTL
Trigger: CAACGTGCGCGAGAAGGTCAAGCAGGTGATGGCCCT...AGCAGCCCTGTGGAGCTGGACCTGTTTGGAGACCCCAGCCCCAGTTCCAAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
3UTR-3UTR CAA 90 bp AGGCCCCCAGGAGGATCCACTGGCCTCTGTGTTCGGCCTAAAACCTGGCTGGTTAGTGCCATGCGCTCCTaGGTCTTGAGGGCGTGGGTT +
Preference number: 3 (lower is better)
Translates to: RPPGGSTGLCVRPKTWLVSAMRS*VLRAWV
Trigger: AACCCACGCCCTCAAGACCAAGGAGCGCATGGCACT...AACCAGCCAGGTTTTAGGCCGAACACAGAGGCCAGTGGATCCTCCTGGGGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512291.5
3UTR-3UTR CAA 90 bp AAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTGCTTGGCTGGGTTAGTGCTAGTGCCATGCGCTCCTaGGTCTTGAGGGCGTGGGTT +
Preference number: 3 (lower is better)
Translates to: KDSGVRQARASLLGWVSASAMRS*VLRAWV
Trigger: AACCCACGCCCTCAAGACCAAGGAGCGCATGGCACT...AGCACTAACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
3UTR GCA 72 bp GGAAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTaGTTGGCTGGGTTAGTGCTTCCCCTAGTATGCCCA +
Preference number: 3 (lower is better)
Translates to: GRTRESGKLGPL*LAGLVLPLVCP
Trigger: TGGGCATACTAGGGGAAGCACTAACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR TCA 72 bp GGATCTCCAGGCCTTGGAGCCAGACTGTCTGACTCTTaGGTTCCAGCCCCGCCCCATGCCAGCTTTGTGACT +
Preference number: 3 (lower is better)
Translates to: GSPGLGARLSDS*VPAPPHASFVT
Trigger: AGTCACAAAGCTGGCATGGGGCGGGGCTGGAACTCAAGAGTCAGACAGTCTGGCTCCAAGGCCTGGAGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR TCA 72 bp TCCTTTCTCTCTTCTCTCTCAGGCTCTCTGTCCCGCTaGTGGTGGACCACGGCCCCTGCACCATTGGCCATG +
Preference number: 3 (lower is better)
Translates to: SFLSSLSGSLSR*WWTTAPAPLAM
Trigger: CATGGCCAATGGTGCAGGGGCCGTGGTCCACCATCAGCGGGACAGAGAGCCTGAGAGAGAAGAGAGAAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
3UTR GCA 72 bp AAACAAAGGAGCCTGGGAGCTCCTGCACTTGGCTTCTaGCACAGCCGCATCACGTGCCCCTGGCTTGTCTAC +
Preference number: 3 (lower is better)
Translates to: KQRSLGAPALGF*HSRITCPWLVY
Trigger: GTAGACAAGCCAGGGGCACGTGATGCGGCTGTGGCAGAAGCCAAGTGCAGGAGCTCCCAGGCTCCTTTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR CCA 72 bp GGGCATCTGGCTCCTTCGTGCCATTTTGCTTGGAACTaGGGCTGGGGTCTCCAAACAGGTCCAGCTCCACAG +
Preference number: 3 (lower is better)
Translates to: GHLAPSCHFAWN*GWGLQTGPAPQ
Trigger: CTGTGGAGCTGGACCTGTTTGGAGACCCCAGCCCCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CAA 90 bp ACCCCCACCTCAGGAAGGGGAGTGGCATTGTGCCTCTCCACTCACCGACTCTGGCCGCAAAAAGTCCACTaGGTGAGAGCTGAGAACGAG +
Preference number: 3 (lower is better)
Translates to: TPTSGRGVALCLSTHRLWPQKVH*VRAENE
Trigger: CTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGG...CCAGAGTCGGTGAGTGGAGAGGCACAATGCCACTCCCCTTCCTGAGGTGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR CAA 90 bp CCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCAAGGAACAAAGGCCTATaGTCTCTTGCTGTTAGCCCA +
Preference number: 3 (lower is better)
Translates to: PVIHAVVETRPPHPAKSPRNKGL*SLAVSP
Trigger: TGGGCTAACAGCAAGAGACAATAGGCCTTTGTTCCT...TGGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR CAA 90 bp ATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGGAACTGGGGCTCCTTCGTGCCATTTaGCTTGGAACTGGGGCTGGG +
Preference number: 3 (lower is better)
Translates to: MPRSRASGSFVPFCLELGLLRAI*LGTGAG
Trigger: CCCAGCCCCAGTTCCAAGCAAAATGGCACGAAGGAG...CCCCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CAA 90 bp TTTGCACCCCACGTTGTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTCCAGTGCTGGGGAGTTaGTGGTGGGGAGAGTTCAGG +
Preference number: 3 (lower is better)
Translates to: FAPHVVQLQFPKQPVIHAPVLGS*WWGEFR
Trigger: CCTGAACTCTCCCCACCACAAACTCCCCAGCACTGG...AGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCACAACGTGGGGTGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000512379.5
ENST00000537145.2
3UTR-3UTR CAA 90 bp TTGCTTGGAACTGGGGCTGGGGTCTCCAAACAGGTCCAGCTCCACAGGGCTGCTACCAACGAGTCAAGGTaGACCAAGGAGGAAGCTGAG +
Preference number: 3 (lower is better)
Translates to: LLGTGAGVSKQVQLHRAATNESR*TKEEAE
Trigger: CTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGGT...AGCAGCCCTGTGGAGCTGGACCTGTTTGGAGACCCCAGCCCCAGTTCCAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CAA 90 bp TTTGCAACCTGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGGAAGCTATGCGCTCCTTGGTCTaGAGGGCGTGGGTTCGCTCC +
Preference number: 3 (lower is better)
Translates to: FATWGALTNESRLTKEEAMRSLV*RAWVRS
Trigger: GGAGCGAACCCACGCCCTCAAGACCAAGGAGCGCAT...AGCTTCCTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
3UTR GCA 72 bp AGCGCTGAGACCTGTCAGGAAGGGGTTCCGGGTCTTTaGAACCTGGGGTGCCTTGACCAACGAGTCAAGGTT +
Preference number: 3 (lower is better)
Translates to: SAETCQEGVPGL*NLGCLDQRVKV
Trigger: AACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAAGACCCGGAACCCCTTCCTGACAGGTCTCAGCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR CCA 72 bp CCAGCCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTaGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTG +
Preference number: 3 (lower is better)
Translates to: PAPPWSLWILEV*QMGQRSRHHQV
Trigger: CACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CAA 90 bp TTTGCACCCCACGTTGTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTAGTTTCTCGCTAGCCTaGGCGAAGCAAGGGAGAGGG +
Preference number: 3 (lower is better)
Translates to: FAPHVVQLQFPKQPVIHASFSLA*AKQGRG
Trigger: CCCTCTCCCTTGCTTCGCCAAGGCTAGCGAGAAACT...AGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCACAACGTGGGGTGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR TCA 72 bp TGCGCTCGAGCTCCTGGAGGTTGGATCCCTCCAAGGTaGGCCCAGCACTTTGTCCACAGCAGTCAGTCAATA +
Preference number: 3 (lower is better)
Translates to: CARAPGGWIPPR*AQHFVHSSQSI
Trigger: TATTGACTGACTGCTGTGGACAAAGTGCTGGGCTCACCTTGGAGGGATCCAACCTCCAGGAGCTCGAGCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR CCA 72 bp AGACCTGTCAGGAAGGGGTTCCGGGTCTTTGCAACCTaGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAG +
Preference number: 3 (lower is better)
Translates to: RPVRKGFRVFAT*GALTNESRLTK
Trigger: CTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAAGACCCGGAACCCCTTCCTGACAGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR-3UTR CAA 90 bp TCTGAGCCACGGTTTCCTTGCCTGAAAAATGGGAGTAGTGCCGGCTGCAAGGTGGCACTGCAGTGGGCTTaGCGCTTGGTTTCATGCTCT +
Preference number: 3 (lower is better)
Translates to: SEPRFPCLKNGSSAGCKVALQWA*RLVSCS
Trigger: AGAGCATGAAACCAAGCGCAAAGCCCACTGCAGTGC...CACCTTGCAGCCGGCACTACTCCCATTTTTCAGGCAAGGAAACCGTGGCTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR TCA 72 bp CCGCCACACCCCGCAAAAAGTCCACTTGGTGAGAGCTaGGAACGAGGGTTCCAGTCTTTATTATGCGGGCGT +
Preference number: 3 (lower is better)
Translates to: PPHPAKSPLGES*ERGFQSLLCGR
Trigger: ACGCCCGCATAATAAAGACTGGAACCCTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTGGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
3UTR TCA 72 bp GACCCGGCCGCCACACCCCGCAAAAAGTCCACTTGGTaGGAGCTGAGAACGAGGGTTCCAGTCTTTATTATG +
Preference number: 3 (lower is better)
Translates to: DPAATPRKKSTW*ELRTRVPVFIM
Trigger: CATAATAAAGACTGGAACCCTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTGGCGGCCGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
3UTR GCA 72 bp AATGGGAGTAGTGCCGGCTGCAAGGTGAGATACCTGTaGAATCGCACTGCAGTGGGCTTTGCGCTTGGTTTC +
Preference number: 3 (lower is better)
Translates to: NGSSAGCKVRYL*NRTAVGFALGF
Trigger: GAAACCAAGCGCAAAGCCCACTGCAGTGCGATTGCACAGGTATCTCACCTTGCAGCCGGCACTACTCCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR CCA 72 bp CTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATaGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGA +
Preference number: 3 (lower is better)
Translates to: LLGLCGFWRFGK*VKGRGTTRCVG
Trigger: TCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR CCA 72 bp CCAGGGCAGGTACGAAGATGTCAGCCAAGTCCAGGATaGAGGACTGGCTGGTTTTTAGCTTCTCCTCCTCCT +
Preference number: 3 (lower is better)
Translates to: PGQVRRCQPSPG*RTGWFLASPPP
Trigger: AGGAGGAGGAGAAGCTAAAAACCAGCCAGTCCTCCATCCTGGACTTGGCTGACATCTTCGTACCTGCCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512379.5
3UTR TCA 72 bp ACATCAGTGTCCAGTGGTCCAGTGATCAGGGAGCATTaGGAAGAAAAACAGGCGAGGGTGGTCATAGGGGCC +
Preference number: 3 (lower is better)
Translates to: TSVSSGPVIREH*EEKQARVVIGA
Trigger: GGCCCCTATGACCACCCTCGCCTGTTTTTCTTCTCAATGCTCCCTGATCACTGGACCACTGGACACTGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR GCA 72 bp CGGTTTCCTTGCCTGAAAAATGGGAGTAGTGCCGGCTaGAAGGTGAGATACCTGTGCAATCGCACTGCAGTG +
Preference number: 3 (lower is better)
Translates to: RFPCLKNGSSAG*KVRYLCNRTAV
Trigger: CACTGCAGTGCGATTGCACAGGTATCTCACCTTGCAGCCGGCACTACTCCCATTTTTCAGGCAAGGAAACCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR-3UTR CAA 90 bp ATTCTTGTTAGGGTCAAACCTTGGAGCAGAACTTTGAACCCTGTAAGTCTGACTCTGTTTGTAACTGCATaGTGGGACTCCCTTCCCCTA +
Preference number: 3 (lower is better)
Translates to: ILVRVKPWSRTLNPVSLTLFVTA*WDSLPL
Trigger: TAGGGGAAGGGAGTCCCACAATGCAGTTACAAACAG...AGTCAGACTTACAGGGTTCAAAGTTCTGCTCCAAGGTTTGACCCTAACAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR GCA 72 bp CTCAGAGAGTCGTTGCAAGCATTAAATAAACTGATCTaGTTAGCACGTAAGCAGTACCCAATAAATAGGAAC +
Preference number: 3 (lower is better)
Translates to: LRESLQALNKLI*LARKQYPINRN
Trigger: GTTCCTATTTATTGGGTACTGCTTACGTGCTAAGCAGATCAGTTTATTTAATGCTTGCAACGACTCTCTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR TCA 90 bp CCTGCCCGGCTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCCGCCGTAGCGGCGGCTaGAGCCCAGCTGCCCACTGC +
Preference number: 4 (lower is better)
Translates to: PARLARAERVGGGRSAETRRSGG*SPAAHC
Trigger: GCAGTGGGCAGCTGGGCTTCAGCCGCCGCTACGGCG...GGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAGCCGGGCAGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp GGCGCTGTAGGTCATGGAGCCCAGGGGCGCCCCCACAGGCCCGCCTGCCAGGCCGGTTTAGCGTCGGCCTaGCCGGCTCGCCCGCGCCGA +
Preference number: 4 (lower is better)
Translates to: GAVGHGAQGRPHRPACQAGLASA*PARPRR
Trigger: TCGGCGCGGGCGAGCCGGGCAGGCCGACGCTAAACC...GGCCTGGCAGGCGGGCCTGTGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp GGCGCTGTAGGTCATGGAGCCCAGGGGCGCCCCCACAGGCCCGCCTGCCAGGCCCAGCAGCGGCTGCGGTaGGAAGGCTCCGGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: GAVGHGAQGRPHRPACQAQQRLR*EGSGLR
Trigger: CCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTGCTG...GGCCTGGCAGGCGGGCCTGTGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp GGCGCTGTAGGTCATGGAGCCCAGGGGCGCCCCCACAGGCCCGCCTGCCAGGCCCAGCTGGCACGCTGCTaGGCGGGAGGGGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: GAVGHGAQGRPHRPACQAQLARC*AGGAER
Trigger: CCTCTCTGCCCCTCCCGCTCAGCAGCGTGCCAGCTG...GGCCTGGCAGGCGGGCCTGTGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GGCGCTGTAGGTCATGGAGCCCAGGGGCGCCCCCACAGGCCCGCCTGCCAGGCCTTCTCGCGGCACTGGTaGGCCACCCGCTCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GAVGHGAQGRPHRPACQAFSRHW*ATRSEP
Trigger: GGGCTCCGAGCGGGTGGCCCACCAGTGCCGCGAGAA...GGCCTGGCAGGCGGGCCTGTGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GGCGCTGTAGGTCATGGAGCCCAGGGGCGCCCCCACAGGCCCGCCTGCCAGGCCCCCAGGGGTCTGTGGTaGGGGGCCCAGCAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GAVGHGAQGRPHRPACQAPRGLW*GAQQAA
Trigger: TGCTGCCTGCTGGGCCCCCCACCACAGACCCCTGGG...GGCCTGGCAGGCGGGCCTGTGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp CAGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGCGCCGTAGCGGCGGCTaGAGCCCAGCTGCCCACTGC +
Preference number: 4 (lower is better)
Translates to: QRLRCEGSGLREDANRGGRRSGG*SPAAHC
Trigger: GCAGTGGGCAGCTGGGCTTCAGCCGCCGCTACGGCG...CCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp CCTGCCCGGCTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCGGCTCTCTGTCCCGCTaGTGGTGGACCACGGCCCCT +
Preference number: 4 (lower is better)
Translates to: PARLARAERVGGGRSAETGSLSR*WWTTAP
Trigger: AGGGGCCGTGGTCCACCATCAGCGGGACAGAGAGCC...GGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAGCCGGGCAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp CAGAGAGGCGCTGTAGGTCATGGAGCCCAGGGGCGCCCCCACAGGCCCGCCTGCGTGGGCAGCAGCGGCTaGGGTGCGAAGGCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: QRGAVGHGAQGRPHRPACVGSSG*GAKAPA
Trigger: GGCCGGAGCCTTCGCACCGCAGCCGCTGCTGCCCAC...GCAGGCGGGCCTGTGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCCTCTCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CTGCCCGGCTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTCCCAGCAGGCAGCACTaGGGTCCTGCCCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LPGSPAPNGLVGDGALRPPSRQH*GPAPGL
Trigger: GAGCCCTGGGGCAGGACCCCAGTGCTGCCTGCTGGG...AGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAGCCGGGCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp TCGGCGTGGGCAGCAGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCGCGTGGGTTCGCTCCTaGCGCAGCCGCTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: SAWAAAAAVRRLRPAGRRAWVRS*RSRSSS
Trigger: GGATGAGGAGCGGCTGCGGCAGGAGCGAACCCACGC...GCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTGCTGCCCACGCCGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp TCGGCGTGGGCAGCAGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCGCGCCGGCGAGCCGGTaGGCATCTGGTTTAGCGTCG +
Preference number: 4 (lower is better)
Translates to: SAWAAAAAVRRLRPAGRRAPASR*ASGLAS
Trigger: CGACGCTAAACCAGATGCGCACCGGCTCGCCGGCGC...GCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTGCTGCCCACGCCGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp GTGGTCCGCGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCCAGCAGCGGCTGCGGTaGGAAGGCTCCGGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: VVRVQLPEPPRDTSRHWLQQRLR*EGSGLR
Trigger: CCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTGCTG...GAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACGCGGACCAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CCA 90 bp AGCTCGGCGTGGGCAGCAGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACTGGAGACTTGGAGGTaGGTGGCCCTCGCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: SSAWAAAAAVRRLRPAGRLETWR*VALAPA
Trigger: GGCGGGGGCGAGGGCCACCCACCTCCAAGTCTCCAG...TCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTGCTGCCCACGCCGAGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp AGGCCCAGCGCCGGCGAGCCGGTGCGCATCTGGTTTAGCGTCGGCCTGCCCGGCAGGTTCTCGCGGCACTaGTGGGCCACCCGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: RPSAGEPVRIWFSVGLPGRFSRH*WATRSE
Trigger: CTCCGAGCGGGTGGCCCACCAGTGCCGCGAGAACCT...GCCGGGCAGGCCGACGCTAAACCAGATGCGCACCGGCTCGCCGGCGCTGGGCCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp CGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCGGCGTTCCCAGCTGGCACGCTGCTaGGCGGGAGGGGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: RPASRAAAGYQPPLARRSQLARC*AGGAER
Trigger: CCTCTCTGCCCCTCCCGCTCAGCAGCGTGCCAGCTG...GGAACGCCGAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR TCA 90 bp CTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGAGGGTCAGCTGGCACGCTGCTaGGCGGGAGGGGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: LRCEGSGLREDANRGGEGQLARC*AGGAER
Trigger: CCTCTCTGCCCCTCCCGCTCAGCAGCGTGCCAGCTG...ACCCTCCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp GCCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCGGTCCGCGTCCCGGCTaGGCTCGGCGTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: AGDPRCGRDPAATPRKKSGPRPG*ARRGQQ
Trigger: CTGCTGCCCACGCCGAGCTCAGCCGGGACGCGGACC...GGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537145.2
CDS-3UTR GCA 90 bp GGCGCTGTAGGTCATGGAGCCCAGGGGCGCCCCCACAGGCCCGCCTGCCAGGCCGCTGCCCACTGCCAATaGCGATGCCCTCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: GAVGHGAQGRPHRPACQAAAHCQ*RCPPVP
Trigger: TGGCACTGGAGGGCATCGGCATTGGCAGTGGGCAGC...GGCCTGGCAGGCGGGCCTGTGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp CCTGCCCGGCTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCAGCCCAGCTGCCCACTaGCAATGCCGATGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: PARLARAERVGGGRSAETSPAAH*QCRCPP
Trigger: TGGAGGGCATCGGCATTGGCAGTGGGCAGCTGGGCT...GGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAGCCGGGCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp CTGCCCGGCTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTCTCACCTCCTTCTCGTaGTCCTGCCGGCTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LPGSPAPNGLVGDGALRPLTSFS*SCRLRR
Trigger: GCGCCTGAGCCGGCAGGAGCACGAGAAGGAGGTGAG...AGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAGCCGGGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp GTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCGGCGTTCCACAGCAGCGGCTGCGGTaGGAAGGCTCCGGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: VQLPEPPRDTSRHWLGVPQQRLR*EGSGLR
Trigger: CCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTGCTG...TGGAACGCCGAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR GCA 90 bp GTGGTCCGCGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCAGAGGAAGGGGTTGGTaGCGGTCTGCGGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: VVRVQLPEPPRDTSRHWLRGRGW*RSAGAG
Trigger: CCCCGCCCCCGCAGACCGGCACCAACCCCTTCCTCT...GAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACGCGGACCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CCA 90 bp CTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGAGGGTAGACTTGGAGGTGGGTaGCCCTCGCCCCCGCCGGAG +
Preference number: 4 (lower is better)
Translates to: LRCEGSGLREDANRGGEGRLGGG*PSPPPE
Trigger: CTCCGGCGGGGGCGAGGGCCACCCACCTCCAAGTCT...ACCCTCCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GGCGCTGTAGGTCATGGAGCCCAGGGGCGCCCCCACAGGCCCGCCTGCCAGGCCTCATGGCTGGAGACTTaGAGGTGGGTGGCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: GAVGHGAQGRPHRPACQASWLET*RWVALA
Trigger: GGCGAGGGCCACCCACCTCCAAGTCTCCAGCCATGA...GGCCTGGCAGGCGGGCCTGTGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CCTGCCCGGCTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCCTGCACCATTGGCCATaGGGGAGCCATCACCCTGCC +
Preference number: 4 (lower is better)
Translates to: PARLARAERVGGGRSAETLHHWP*GSHHPA
Trigger: GGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAG...GGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAGCCGGGCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GTGGTCCGCGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCCCCAGCAGGCAGCACTaGGGTCCTGCCCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: VVRVQLPEPPRDTSRHWLPSRQH*GPAPGL
Trigger: GAGCCCTGGGGCAGGACCCCAGTGCTGCCTGCTGGG...GAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACGCGGACCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CCA 90 bp CTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGAGGGTCCCAGGGGTCTGTGGTaGGGGGCCCAGCAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LRCEGSGLREDANRGGEGPRGLW*GAQQAA
Trigger: TGCTGCCTGCTGGGCCCCCCACCACAGACCCCTGGG...ACCCTCCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp CCTGCCCGGCTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCGCCGATGCCCTCCAGTaGCATGCGCTCCTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: PARLARAERVGGGRSAETADALQ*HALLGL
Trigger: AAGACCAAGGAGCGCATGGCACTGGAGGGCATCGGC...GGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAGCCGGGCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp AGGCCCAGCGCCGGCGAGCCGGTGCGCATCTGGTTTAGCGTCGGCCTGCCCGGCAGCCCAGCTGCCCACTaGCAATGCCGATGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: RPSAGEPVRIWFSVGLPGSPAAH*QCRCPP
Trigger: TGGAGGGCATCGGCATTGGCAGTGGGCAGCTGGGCT...GCCGGGCAGGCCGACGCTAAACCAGATGCGCACCGGCTCGCCGGCGCTGGGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp GGCTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTGTCAGGAGGCGCAGAGCCAGCTaGAGCTGCAGGTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: GSPAPNGLVGDGALRPVRRRRAS*SCRSSS
Trigger: GGACGAGGACCTGCAGCTGCAGCTGGCTCTGCGCCT...CCTGACAGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp GGATACCAGCCGCCACTGGCTCGGCGTTCCACTAGCACCGGCGCCCCGCCCAGCCGGAGACCAGGGGTCTaGAGAAGGCCCCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GYQPPLARRSTSTGAPPSRRPGV*RRPPGG
Trigger: TCCTCCTGGGGGCCTTCTGCAGACCCCTGGTCTCCG...GCTGGGCGGGGCGCCGGTGCTAGTGGAACGCCGAGCCAGTGGCGGCTGGTATCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR GCA 90 bp CCTGCCCGGCTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCAAGGGTCAGCCCCAGTaGTGGGGAGTTTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: PARLARAERVGGGRSAETKGQPQ*WGVCGG
Trigger: CCCACCACAAACTCCCCAGCACTGGGGCTGACCCTT...GGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAGCCGGGCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp TGGACCACGGCCCCTGCACCATTGGCCATGGGGGAGCCATCACCCTGCCAGGACGGTTTAGCGTCGGCCTaGCCGGCTCGCCCGCGCCGA +
Preference number: 4 (lower is better)
Translates to: WTTAPAPLAMGEPSPCQDGLASA*PARPRR
Trigger: TCGGCGCGGGCGAGCCGGGCAGGCCGACGCTAAACC...GTCCTGGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGTGGTCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CCA 90 bp TCGGCGTGGGCAGCAGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCGCAGGGTCCCTGGAATaGGTAGCAGCTCTTCCCGCG +
Preference number: 4 (lower is better)
Translates to: SAWAAAAAVRRLRPAGRRAGSLE*VAALPA
Trigger: CGCGGGAAGAGCTGCTACCCATTCCAGGGACCCTGC...GCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTGCTGCCCACGCCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CCA 90 bp CTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTGTCAGGAAAGACTTGGAGGTGGGTaGCCCTCGCCCCCGCCGGAG +
Preference number: 4 (lower is better)
Translates to: LARAERVGGGRSAETCQERLGGG*PSPPPE
Trigger: CTCCGGCGGGGGCGAGGGCCACCCACCTCCAAGTCT...TTCCTGACAGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTGTCAGGAACCCAGGGGTCTGTGGTaGGGGGCCCAGCAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LARAERVGGGRSAETCQEPRGLW*GAQQAA
Trigger: TGCTGCCTGCTGGGCCCCCCACCACAGACCCCTGGG...TTCCTGACAGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp AGCTCGGCGTGGGCAGCAGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGAGAGCCGGTGCGCATCTaGTTTAGCGTCGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SSAWAAAAAVRRLRPAGREPVRI*FSVGLP
Trigger: GGGCAGGCCGACGCTAAACCAGATGCGCACCGGCTC...TCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTGCTGCCCACGCCGAGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp AGCTCGGCGTGGGCAGCAGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGAGAGGGTCAAGCCAGCTaGCACGCTGCTGAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: SSAWAAAAAVRRLRPAGREGQAS*HAAERE
Trigger: CTCCCGCTCAGCAGCGTGCCAGCTGGCTTGACCCTC...TCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTGCTGCCCACGCCGAGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp CCGTGGTCCGCGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCTTGCCGCTGTCATTaGGCCGCCGCCACAGCATGC +
Preference number: 4 (lower is better)
Translates to: PWSASSFQSRRGIPAATGSCRCH*AAATAC
Trigger: GCATGCTGTGGCGGCGGCTCAATGACAGCGGCAAGA...GCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACGCGGACCACGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR TCA 90 bp CAGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGCCGCTCCTCATCCTTaGGCAGGGCCATCACCTGCT +
Preference number: 4 (lower is better)
Translates to: QRLRCEGSGLREDANRGGAAPHP*AGPSPA
Trigger: AGCAGGTGATGGCCCTGCTCAAGGATGAGGAGCGGC...CCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp CTGCCAGGCCCAGCGCCGGCGAGCCGGTGCGCATCTGGTTTAGCGTCGGCCTGCTGCGCTCCTTGGTCTTaGGGGCGTGGGTTCGCTCCT +
Preference number: 4 (lower is better)
Translates to: LPGPAPASRCASGLASACCAPWS*GRGFAP
Trigger: AGGAGCGAACCCACGCCCTCAAGACCAAGGAGCGCA...GCAGGCCGACGCTAAACCAGATGCGCACCGGCTCGCCGGCGCTGGGCCTGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp GGCTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTGTCAGGTGCGCTCCTTGGTCTTaGGGGCGTGGGTTCGCTCCT +
Preference number: 4 (lower is better)
Translates to: GSPAPNGLVGDGALRPVRCAPWS*GRGFAP
Trigger: AGGAGCGAACCCACGCCCTCAAGACCAAGGAGCGCA...CCTGACAGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp AGGCCCAGCGCCGGCGAGCCGGTGCGCATCTGGTTTAGCGTCGGCCTGCCCGGCGACCAAGGAGGAAGCTaGGGGACCCAGGAAGGACTC +
Preference number: 4 (lower is better)
Translates to: RPSAGEPVRIWFSVGLPGDQGGS*GTQEGL
Trigger: GAGTCCTTCCTGGGTCCCTCAGCTTCCTCCTTGGTC...GCCGGGCAGGCCGACGCTAAACCAGATGCGCACCGGCTCGCCGGCGCTGGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp CTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGAGGGTTGGGGGACGGAGCGCTaGGACCTGTCAGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: LRCEGSGLREDANRGGEGWGTER*DLSGRG
Trigger: ACCCCTTCCTGACAGGTCTCAGCGCTCCGTCCCCCA...ACCCTCCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp GATGGTGGACCACGGCCCCTGCACCATTGGCCATGGGGGAGCCATCACCCTGCCCAGCTGGCACGCTGCTaGGCGGGAGGGGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: DGGPRPLHHWPWGSHHPAQLARC*AGGAER
Trigger: CCTCTCTGCCCCTCCCGCTCAGCAGCGTGCCAGCTG...GGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGTGGTCCACCATC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
CDS-3UTR GCA 90 bp CGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCGGCGTTCCCTTCCCGCGTGCGTTTaGCTCCTAGCCAGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: RPASRAAAGYQPPLARRSLPACV*LLASAR
Trigger: CCTGGCGCTGGCTAGGAGGCAAACGCACGCGGGAAG...GGAACGCCGAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268933.8
ENST00000512379.5
CDS-3UTR GCA 90 bp CGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGAGGGTCAACACCTGGCGCCGGAGTaGGGAGGTCGTCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: RCEGSGLREDANRGGEGQHLAPE*GGRHGW
Trigger: CCAGCCATGACGACCTCCGCACTCCGGCGCCAGGTG...TTGACCCTCCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp CTGCCCGGCTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTAGCAGGGCCATCACCTaGTTGACCTTCTCGCGCACG +
Preference number: 4 (lower is better)
Translates to: LPGSPAPNGLVGDGALRPSRAIT*LTFSRT
Trigger: CGTGCGCGAGAAGGTCAAGCAGGTGATGGCCCTGCT...AGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAGCCGGGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp GTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCGGCGTTCCAGCGTGGGTTCGCTCCTaGCGCAGCCGCTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: VQLPEPPRDTSRHWLGVPAWVRS*RSRSSS
Trigger: GGATGAGGAGCGGCTGCGGCAGGAGCGAACCCACGC...TGGAACGCCGAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR GCA 90 bp GGCTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTGTCAGGGCTGCCCACTGCCAATaGCGATGCCCTCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: GSPAPNGLVGDGALRPVRAAHCQ*RCPPVP
Trigger: TGGCACTGGAGGGCATCGGCATTGGCAGTGGGCAGC...CCTGACAGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp CAGAGAGGCGCTGTAGGTCATGGAGCCCAGGGGCGCCCCCACAGGCCCGCCTGCGGGGAGCCATCACCCTaGCAGGACCTCACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QRGAVGHGAQGRPHRPACGEPSP*QDLTSF
Trigger: GAAGGAGGTGAGGTCCTGGCAGGGTGATGGCTCCCC...GCAGGCGGGCCTGTGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCCTCTCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp CTGCCAGGCCCAGCGCCGGCGAGCCGGTGCGCATCTGGTTTAGCGTCGGCCTGCGGGGAGCCATCACCCTaGCAGGACCTCACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LPGPAPASRCASGLASACGEPSP*QDLTSF
Trigger: GAAGGAGGTGAGGTCCTGGCAGGGTGATGGCTCCCC...GCAGGCCGACGCTAAACCAGATGCGCACCGGCTCGCCGGCGCTGGGCCTGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp AGGAGCCTGGGAGCTCCTGCACTTGGCTTCTGCCACAGCCGCATCACGTGCCCCGGTTTAGCGTCGGCCTaGCCGGCTCGCCCGCGCCGA +
Preference number: 4 (lower is better)
Translates to: RSLGAPALGFCHSRITCPGLASA*PARPRR
Trigger: TCGGCGCGGGCGAGCCGGGCAGGCCGACGCTAAACC...GGGGCACGTGATGCGGCTGTGGCAGAAGCCAAGTGCAGGAGCTCCCAGGCTCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR GCA 90 bp CTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTGTCAGGAAGCGCCGGCGAGCCGGTaGGCATCTGGTTTAGCGTCG +
Preference number: 4 (lower is better)
Translates to: LARAERVGGGRSAETCQEAPASR*ASGLAS
Trigger: CGACGCTAAACCAGATGCGCACCGGCTCGCCGGCGC...TTCCTGACAGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp GCTGGCTTCGGGACAGGACGGTTCCTGAGGGGATCGGAGACCAGGGGTCTGCAGCAGCAGCGGCTGCGGTaGGAAGGCTCCGGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: AGFGTGRFLRGSETRGLQQQRLR*EGSGLR
Trigger: CCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTGCTG...CTGCAGACCCCTGGTCTCCGATCCCCTCAGGAACCGTCCTGTCCCGAAGCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GTCCCGCTGATGGTGGACCACGGCCCCTGCACCATTGGCCATGGGGGAGCCATCCTGGAGACTTGGAGGTaGGTGGCCCTCGCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: VPLMVDHGPCTIGHGGAILETWR*VALAPA
Trigger: GGCGGGGGCGAGGGCCACCCACCTCCAAGTCTCCAG...GATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGTGGTCCACCATCAGCGGGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CCA 90 bp GGGAAGACGCTAACCGAGGCGGGGAGGGTCAAGCCAGCTGGCACGCTGCTGAGCTTCTCGCGGCACTGGTaGGCCACCCGCTCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GKTLTEAGRVKPAGTLLSFSRHW*ATRSEP
Trigger: GGGCTCCGAGCGGGTGGCCCACCAGTGCCGCGAGAA...GCTCAGCAGCGTGCCAGCTGGCTTGACCCTCCCCGCCTCGGTTAGCGTCTTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GGACCACGGCCCCTGCACCATTGGCCATGGGGGAGCCATCACCCTGCCAGGACCAGGTTCTCGCGGCACTaGTGGGCCACCCGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: GPRPLHHWPWGSHHPARTRFSRH*WATRSE
Trigger: CTCCGAGCGGGTGGCCCACCAGTGCCGCGAGAACCT...GGTCCTGGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGTGGTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CCA 90 bp CCGTGGTCCGCGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTTGGTCTTGAGGGCGTaGGTTCGCTCCTGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: PWSASSFQSRRGIPAATGLVLRA*VRSCRS
Trigger: GCTGCGGCAGGAGCGAACCCACGCCCTCAAGACCAA...GCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACGCGGACCACGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CCA 90 bp GGGAAGACGCTAACCGAGGCGGGGAGGGTCAAGCCAGCTGGCACGCTGCTGAGCCCCAGCAGGCAGCACTaGGGTCCTGCCCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: GKTLTEAGRVKPAGTLLSPSRQH*GPAPGL
Trigger: GAGCCCTGGGGCAGGACCCCAGTGCTGCCTGCTGGG...GCTCAGCAGCGTGCCAGCTGGCTTGACCCTCCCCGCCTCGGTTAGCGTCTTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GCTGGCTTCGGGACAGGACGGTTCCTGAGGGGATCGGAGACCAGGGGTCTGCAGCTAGCTCCCGGGCCGTaGTCCGCGTCCCGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: AGFGTGRFLRGSETRGLQLAPGP*SASRLS
Trigger: GCTCAGCCGGGACGCGGACCACGGCCCGGGAGCTAG...CTGCAGACCCCTGGTCTCCGATCCCCTCAGGAACCGTCCTGTCCCGAAGCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537145.2
CDS-3UTR TCA 90 bp GGGAAGACGCTAACCGAGGCGGGGAGGGTCAAGCCAGCTGGCACGCTGCTGAGCGGCTCTCTGTCCCGCTaGTGGTGGACCACGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GKTLTEAGRVKPAGTLLSGSLSR*WWTTAP
Trigger: AGGGGCCGTGGTCCACCATCAGCGGGACAGAGAGCC...GCTCAGCAGCGTGCCAGCTGGCTTGACCCTCCCCGCCTCGGTTAGCGTCTTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp TCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCGGCGTTCCACTGGGGGACGGAGCGCTaGGACCTGTCAGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: SSFQSRRGIPAATGSAFHWGTER*DLSGRG
Trigger: ACCCCTTCCTGACAGGTCTCAGCGCTCCGTCCCCCA...GTGGAACGCCGAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR TCA 90 bp GTGGTCCGCGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCCAGTTCCTCTTCCCCTaGCGTCTGAGGCCGGGCAGT +
Preference number: 4 (lower is better)
Translates to: VVRVQLPEPPRDTSRHWLQFLFP*RLRPGS
Trigger: ACTGCCCGGCCTCAGACGTCAGGGGAAGAGGAACTG...GAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACGCGGACCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510045.5
CDS-3UTR GCA 90 bp AGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGAGCAGGGCCATCACCTaGTTGACCTTCTCGCGCACG +
Preference number: 4 (lower is better)
Translates to: SGCGAKAPACGKTLTEAGSRAIT*LTFSRT
Trigger: CGTGCGCGAGAAGGTCAAGCAGGTGATGGCCCTGCT...CCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp CGGCCCCTGCACCATTGGCCATGGGGGAGCCATCACCCTGCCAGGACCTCACCTGCGTGGGTTCGCTCCTaGCGCAGCCGCTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: RPLHHWPWGSHHPARTSPAWVRS*RSRSSS
Trigger: GGATGAGGAGCGGCTGCGGCAGGAGCGAACCCACGC...AGGTGAGGTCCTGGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
CDS-3UTR GCA 90 bp GCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTGTCAGGAAGGGGTTCCGGCGTGGGTTCGCTCCTaGCGCAGCCGCTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: AERVGGGRSAETCQEGVPAWVRS*RSRSSS
Trigger: GGATGAGGAGCGGCTGCGGCAGGAGCGAACCCACGC...CGGAACCCCTTCCTGACAGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp GTGGTCCGCGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCAGCCCAGCTGCCCACTaGCAATGCCGATGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: VVRVQLPEPPRDTSRHWLSPAAH*QCRCPP
Trigger: TGGAGGGCATCGGCATTGGCAGTGGGCAGCTGGGCT...GAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACGCGGACCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR GCA 90 bp CAGAGAGGCGCTGTAGGTCATGGAGCCCAGGGGCGCCCCCACAGGCCCGCCTGCATGGCGAGGGCCAGCTaGAGCTGCAGTTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QRGAVGHGAQGRPHRPACMARAS*SCSSSS
Trigger: GGAAGAGGAACTGCAGCTGCAGCTGGCCCTCGCCAT...GCAGGCGGGCCTGTGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCCTCTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp CCGTGGTCCGCGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCGGGGTTCCGGGTCTTTaGAACCTGGGGTGCCTTGAC +
Preference number: 4 (lower is better)
Translates to: PWSASSFQSRRGIPAATGGVPGL*NLGCLD
Trigger: GTCAAGGCACCCCAGGTTGCAAAGACCCGGAACCCC...GCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACGCGGACCACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR GCA 90 bp GCATGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCTGAGGGGAGGTTTAGCGTCGGCCTaGCCGGCTCGCCCGCGCCGA +
Preference number: 4 (lower is better)
Translates to: AWESDPRAGFGTGRFLRGGLASA*PARPRR
Trigger: TCGGCGCGGGCGAGCCGGGCAGGCCGACGCTAAACC...TCCCCTCAGGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp AGGAGCCTGGGAGCTCCTGCACTTGGCTTCTGCCACAGCCGCATCACGTGCCCCTTCTCGCGGCACTGGTaGGCCACCCGCTCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: RSLGAPALGFCHSRITCPFSRHW*ATRSEP
Trigger: GGGCTCCGAGCGGGTGGCCCACCAGTGCCGCGAGAA...GGGGCACGTGATGCGGCTGTGGCAGAAGCCAAGTGCAGGAGCTCCCAGGCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp GCTGGCTTCGGGACAGGACGGTTCCTGAGGGGATCGGAGACCAGGGGTCTGCAGTTCTCGCGGCACTGGTaGGCCACCCGCTCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: AGFGTGRFLRGSETRGLQFSRHW*ATRSEP
Trigger: GGGCTCCGAGCGGGTGGCCCACCAGTGCCGCGAGAA...CTGCAGACCCCTGGTCTCCGATCCCCTCAGGAACCGTCCTGTCCCGAAGCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp TATGCGGGCGTTCAGTTTCTAGCTCCCGGGCCGTGGTCCGCGTCCCGGCTGAGCAGGTTCTCGCGGCACTaGTGGGCCACCCGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: YAGVQFLAPGPWSASRLSRFSRH*WATRSE
Trigger: CTCCGAGCGGGTGGCCCACCAGTGCCGCGAGAACCT...GCTCAGCCGGGACGCGGACCACGGCCCGGGAGCTAGAAACTGAACGCCCGCATA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537145.2
CDS-3UTR CCA 90 bp CGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCGGCGTTCCTTGGTCTTGAGGGCGTaGGTTCGCTCCTGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: RPASRAAAGYQPPLARRSLVLRA*VRSCRS
Trigger: GCTGCGGCAGGAGCGAACCCACGCCCTCAAGACCAA...GGAACGCCGAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CCA 90 bp GGCGCTGTAGGTCATGGAGCCCAGGGGCGCCCCCACAGGCCCGCCTGCCAGGCCACCTGGGATGTCCCATaGGTCAGCAGAGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: GAVGHGAQGRPHRPACQATWDVP*VSRAVC
Trigger: ACACACTGCTCTGCTGACCCATGGGACATCCCAGGT...GGCCTGGCAGGCGGGCCTGTGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CTGCCAGGCCCAGCGCCGGCGAGCCGGTGCGCATCTGGTTTAGCGTCGGCCTGCGTGCTGGGGAGTTTGTaGTGGGGAGAGTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LPGPAPASRCASGLASACVLGSL*WGEFRA
Trigger: GGCCCTGAACTCTCCCCACCACAAACTCCCCAGCAC...GCAGGCCGACGCTAAACCAGATGCGCACCGGCTCGCCGGCGCTGGGCCTGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GGCGCTGTAGGTCATGGAGCCCAGGGGCGCCCCCACAGGCCCGCCTGCCAGGCCCAGGTCCAGGGCATCTaGCTCCTTCGTGCCATTTTG +
Preference number: 4 (lower is better)
Translates to: GAVGHGAQGRPHRPACQAQVQGI*LLRAIL
Trigger: CAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTG...GGCCTGGCAGGCGGGCCTGTGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GCCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCCTCAGAGGAAGGGGTTaGTGCCGGTCTGCGGGGGCG +
Preference number: 4 (lower is better)
Translates to: AGDPRCGRDPAATPRKKSLRGRG*CRSAGA
Trigger: CGCCCCCGCAGACCGGCACCAACCCCTTCCTCTGAG...GGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000268933.8
ENST00000512379.5
CDS-3UTR CCA 90 bp GTAGGAGGACGGGGAGCCCCGGGAGCGGCTGTAGTCCTCGCCGTAGCGGCGGCTTCCTTGGGTTCCACATaGGGCTGCTCCCAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: VGGRGAPGAAVVLAVAAASLGST*GCSQEV
Trigger: CACCTCCTGGGAGCAGCCCCATGTGGAACCCAAGGA...AGCCGCCGCTACGGCGAGGACTACAGCCGCTCCCGGGGCTCCCCGTCCTCCTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512291.5
CDS-3UTR TCA 90 bp GGATACCAGCCGCCACTGGCTCGGCGTTCCACTAGCACCGGCGCCCCGCCCAGCGCGAGGTCACAGTCTTaGAGGATGGGCTGCCGTGTT +
Preference number: 4 (lower is better)
Translates to: GYQPPLARRSTSTGAPPSARSQS*RMGCRV
Trigger: AACACGGCAGCCCATCCTTCAAGACTGTGACCTCGC...GCTGGGCGGGGCGCCGGTGCTAGTGGAACGCCGAGCCAGTGGCGGCTGGTATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR TCA 90 bp ACTTGGCTTCTGCCACAGCCGCATCACGTGCCCCTGGCTTGTCTACCCTGCTGCCGCCGTAGCGGCGGCTaGAGCCCAGCTGCCCACTGC +
Preference number: 4 (lower is better)
Translates to: TWLLPQPHHVPLACLPCCRRSGG*SPAAHC
Trigger: GCAGTGGGCAGCTGGGCTTCAGCCGCCGCTACGGCG...GCAGCAGGGTAGACAAGCCAGGGGCACGTGATGCGGCTGTGGCAGAAGCCAAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR TCA 90 bp AGCCGCTCCTCATCCTTGAGCAGGGCCATCACCTGCTTGACCTTCTCGCGCACGCGCCGTAGCGGCGGCTaGAGCCCAGCTGCCCACTGC +
Preference number: 4 (lower is better)
Translates to: SRSSSLSRAITCLTFSRTRRSGG*SPAAHC
Trigger: GCAGTGGGCAGCTGGGCTTCAGCCGCCGCTACGGCG...CGTGCGCGAGAAGGTCAAGCAGGTGATGGCCCTGCTCAAGGATGAGGAGCGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
CDS-3UTR TCA 90 bp CTCTCTGTCCCGCTGATGGTGGACCACGGCCCCTGCACCATTGGCCATGGGGGAGGCTCTCTGTCCCGCTaGTGGTGGACCACGGCCCCT +
Preference number: 4 (lower is better)
Translates to: LSVPLMVDHGPCTIGHGGGSLSR*WWTTAP
Trigger: AGGGGCCGTGGTCCACCATCAGCGGGACAGAGAGCC...TCCCCCATGGCCAATGGTGCAGGGGCCGTGGTCCACCATCAGCGGGACAGAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
CDS-3UTR GCA 90 bp GTGGACCACGGCCCCTGCACCATTGGCCATGGGGGAGCCATCACCCTGCCAGGACTTCCCGCGTGCGTTTaGCTCCTAGCCAGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: VDHGPCTIGHGGAITLPGLPACV*LLASAR
Trigger: CCTGGCGCTGGCTAGGAGGCAAACGCACGCGGGAAG...TCCTGGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGTGGTCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
CDS-3UTR GCA 90 bp CTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTGTCAGGAAGCAGCTCTTCCCGCGTaGGTTTGCCTCCTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LARAERVGGGRSAETCQEAALPA*VCLLAS
Trigger: GCTGGCTAGGAGGCAAACGCACGCGGGAAGAGCTGC...TTCCTGACAGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
CDS-3UTR GCA 90 bp GCCGGCGAGCCGGTGCGCATCTGGTTTAGCGTCGGCCTGCCCGGCTCGCCCGCGGCGCACCTTGATTTCTaGCTCGGAGTAGTTGTGCAC +
Preference number: 4 (lower is better)
Translates to: AGEPVRIWFSVGLPGSPAAHLDF*LGVVVH
Trigger: GTGCACAACTACTCCGAGGCAGAAATCAAGGTGCGC...CGCGGGCGAGCCGGGCAGGCCGACGCTAAACCAGATGCGCACCGGCTCGCCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp TCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCGGCGTTCCACGCTGCCCACTGCCAATaGCGATGCCCTCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: SSFQSRRGIPAATGSAFHAAHCQ*RCPPVP
Trigger: TGGCACTGGAGGGCATCGGCATTGGCAGTGGGCAGC...GTGGAACGCCGAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR GCA 90 bp GTGGTCCGCGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCAAGGGTCAGCCCCAGTaGTGGGGAGTTTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: VVRVQLPEPPRDTSRHWLKGQPQ*WGVCGG
Trigger: CCCACCACAAACTCCCCAGCACTGGGGCTGACCCTT...GAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACGCGGACCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR GCA 90 bp GATGGTGGACCACGGCCCCTGCACCATTGGCCATGGGGGAGCCATCACCCTGCCCCAGCTCCACAGGGCTaGTGGGCTTCCCAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: DGGPRPLHHWPWGSHHPAPAPQG*WASQRA
Trigger: TGCCCTCTGGGAAGCCCAGCAGCCCTGTGGAGCTGG...GGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGTGGTCCACCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
CDS-3UTR GCA 90 bp GCTCTCTGTCCCGCTGATGGTGGACCACGGCCCCTGCACCATTGGCCATGGGGGCCAGCTCCACAGGGCTaGTGGGCTTCCCAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: ALCPADGGPRPLHHWPWGPAPQG*WASQRA
Trigger: TGCCCTCTGGGAAGCCCAGCAGCCCTGTGGAGCTGG...CCCCCATGGCCAATGGTGCAGGGGCCGTGGTCCACCATCAGCGGGACAGAGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
CDS-3UTR GCA 90 bp GGCTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTGTCAGGGTGCTTCCCCTAGTATaGCCAGGTCCAGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: GSPAPNGLVGDGALRPVRVLPLV*PGPGHL
Trigger: CAGATGCCCTGGACCTGGGCATACTAGGGGAAGCAC...CCTGACAGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp GGCGCTGTAGGTCATGGAGCCCAGGGGCGCCCCCACAGGCCCGCCTGCCAGGCCCTTTGCAACCTGGGGTaGCTTGACCAACGAGTCAAG +
Preference number: 4 (lower is better)
Translates to: GAVGHGAQGRPHRPACQALCNLG*LDQRVK
Trigger: CTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAAG...GGCCTGGCAGGCGGGCCTGTGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp TGCGGGCGTTCAGTTTCTAGCTCCCGGGCCGTGGTCCGCGTCCAGCTTCCAGAGGCGCCGGCGAGCCGGTaGGCATCTGGTTTAGCGTCG +
Preference number: 4 (lower is better)
Translates to: CGRSVSSSRAVVRVQLPEAPASR*ASGLAS
Trigger: CGACGCTAAACCAGATGCGCACCGGCTCGCCGGCGC...CTCTGGAAGCTGGACGCGGACCACGGCCCGGGAGCTAGAAACTGAACGCCCGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CCA 90 bp CCTGCCCGGCTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCCACAGTCTTGAAGGATaGGCTGCCGTGTTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: PARLARAERVGGGRSAETHSLEG*AAVLAE
Trigger: CTCTGCTAACACGGCAGCCCATCCTTCAAGACTGTG...GGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAGCCGGGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGAGGGTCAATCATGGCTGGAGACTTaGAGGTGGGTGGCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: RCEGSGLREDANRGGEGQSWLET*RWVALA
Trigger: GGCGAGGGCCACCCACCTCCAAGTCTCCAGCCATGA...TTGACCCTCCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GGACCACGGCCCCTGCACCATTGGCCATGGGGGAGCCATCACCCTGCCAGGACCTTGGTCTTGAGGGCGTaGGTTCGCTCCTGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: GPRPLHHWPWGSHHPARTLVLRA*VRSCRS
Trigger: GCTGCGGCAGGAGCGAACCCACGCCCTCAAGACCAA...GGTCCTGGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGTGGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CCA 90 bp GTGGACCACGGCCCCTGCACCATTGGCCATGGGGGAGCCATCACCCTGCCAGGAGAGCCGGTGCGCATCTaGTTTAGCGTCGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: VDHGPCTIGHGGAITLPGEPVRI*FSVGLP
Trigger: GGGCAGGCCGACGCTAAACCAGATGCGCACCGGCTC...TCCTGGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGTGGTCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CCA 90 bp GGGAAGACGCTAACCGAGGCGGGGAGGGTCAAGCCAGCTGGCACGCTGCTGAGCGAGGGTCAAGCCAGCTaGCACGCTGCTGAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: GKTLTEAGRVKPAGTLLSEGQAS*HAAERE
Trigger: CTCCCGCTCAGCAGCGTGCCAGCTGGCTTGACCCTC...GCTCAGCAGCGTGCCAGCTGGCTTGACCCTCCCCGCCTCGGTTAGCGTCTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGGGAGGCTCCCCCTAGCTCCCGGGCCGTaGTCCGCGTCCAGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: GQRSRHHQVCRRSPGRLPLAPGP*SASSFQ
Trigger: CTGGAAGCTGGACGCGGACCACGGCCCGGGAGCTAG...GGGGAGCCTCCCTGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CCA 90 bp CTGCCAGGCCCAGCGCCGGCGAGCCGGTGCGCATCTGGTTTAGCGTCGGCCTGCCAGCCAAGTCCAGGATaGAGGACTGTGGAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: LPGPAPASRCASGLASACQPSPG*RTVEGR
Trigger: TCTCCCCTCCACAGTCCTCCATCCTGGACTTGGCTG...GCAGGCCGACGCTAAACCAGATGCGCACCGGCTCGCCGGCGCTGGGCCTGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537145.2
ENST00000574464.5
3UTR CAA 72 bp ATGCCGATGCCCTCCAGTGCCATGCGCTCCTTGGTCTaGAGGGCGTGGGTTCGCTCCTGCCGCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: MPMPSSAMRSLV*RAWVRSCRSRS
Trigger: GGAGCGGCTGCGGCAGGAGCGAACCCACGCCCTCAAGACCAAGGAGCGCATGGCACTGGAGGGCATCGGCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
CDS-3UTR TCA 90 bp GGATACCAGCCGCCACTGGCTCGGCGTTCCACTAGCACCGGCGCCCCGCCCAGCGGAGGTATAGCGGGGTaGCGAAGAGGAGGAGTTGTA +
Preference number: 4 (lower is better)
Translates to: GYQPPLARRSTSTGAPPSGGIAG*RRGGVV
Trigger: TACAACTCCTCCTCTTCGTCACCCCGCTATACCTCC...GCTGGGCGGGGCGCCGGTGCTAGTGGAACGCCGAGCCAGTGGCGGCTGGTATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268933.8
ENST00000512379.5
CDS-3UTR TCA 90 bp GTAGGAGGACGGGGAGCCCCGGGAGCGGCTGTAGTCCTCGCCGTAGCGGCGGCTGGAGGTATAGCGGGGTaGCGAAGAGGAGGAGTTGTA +
Preference number: 4 (lower is better)
Translates to: VGGRGAPGAAVVLAVAAAGGIAG*RRGGVV
Trigger: TACAACTCCTCCTCTTCGTCACCCCGCTATACCTCC...AGCCGCCGCTACGGCGAGGACTACAGCCGCTCCCGGGGCTCCCCGTCCTCCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
CDS-3UTR TCA 90 bp GGATACCAGCCGCCACTGGCTCGGCGTTCCACTAGCACCGGCGCCCCGCCCAGCCCACTTGGTGAGAGCTaGGAACGAGGGTTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: GYQPPLARRSTSTGAPPSPLGES*ERGFQS
Trigger: AGACTGGAACCCTCGTTCTCAGCTCTCACCAAGTGG...GCTGGGCGGGGCGCCGGTGCTAGTGGAACGCCGAGCCAGTGGCGGCTGGTATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268933.8
ENST00000512379.5
CDS-3UTR TCA 90 bp GGCTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTGTCAGGCCACTTGGTGAGAGCTaGGAACGAGGGTTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: GSPAPNGLVGDGALRPVRPLGES*ERGFQS
Trigger: AGACTGGAACCCTCGTTCTCAGCTCTCACCAAGTGG...CCTGACAGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512379.5
ENST00000537145.2
CDS-3UTR GCA 90 bp GGACCACGGCCCCTGCACCATTGGCCATGGGGGAGCCATCACCCTGCCAGGACCCACTGCCAATGCCGATaGCCTCCAGTGCCATGCGCT +
Preference number: 4 (lower is better)
Translates to: GPRPLHHWPWGSHHPARTHCQCR*PPVPCA
Trigger: AGCGCATGGCACTGGAGGGCATCGGCATTGGCAGTG...GGTCCTGGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGTGGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
CDS-3UTR GCA 90 bp CTCTCTGTCCCGCTGATGGTGGACCACGGCCCCTGCACCATTGGCCATGGGGGACGGAGACCAGGGGTCTaGAGAAGGCCCCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LSVPLMVDHGPCTIGHGGRRPGV*RRPPGG
Trigger: TCCTCCTGGGGGCCTTCTGCAGACCCCTGGTCTCCG...TCCCCCATGGCCAATGGTGCAGGGGCCGTGGTCCACCATCAGCGGGACAGAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
CDS-3UTR GCA 90 bp GCTGGCTTCGGGACAGGACGGTTCCTGAGGGGATCGGAGACCAGGGGTCTGCAGCCAGCTCCACAGGGCTaGTGGGCTTCCCAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: AGFGTGRFLRGSETRGLQPAPQG*WASQRA
Trigger: TGCCCTCTGGGAAGCCCAGCAGCCCTGTGGAGCTGG...CTGCAGACCCCTGGTCTCCGATCCCCTCAGGAACCGTCCTGTCCCGAAGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp GGCGCTGTAGGTCATGGAGCCCAGGGGCGCCCCCACAGGCCCGCCTGCCAGGCCCATCTGGCTCCTTCGTaGCATTTTGCTTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: GAVGHGAQGRPHRPACQAHLAPS*HFAWNW
Trigger: CCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATG...GGCCTGGCAGGCGGGCCTGTGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp GGGTTAGTGCTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCGGTTTAGCGTCGGCCTaGCCGGCTCGCCCGCGCCGA +
Preference number: 4 (lower is better)
Translates to: GLVLPLVCPGPGHLAPSCGLASA*PARPRR
Trigger: TCGGCGCGGGCGAGCCGGGCAGGCCGACGCTAAACC...GCACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAGCACTAACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp AAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTGCTTGGCTGGGTTAGTGCTGTGGGCAGCAGCGGCTaGGGTGCGAAGGCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: KDSGVRQARASLLGWVSAVGSSG*GAKAPA
Trigger: GGCCGGAGCCTTCGCACCGCAGCCGCTGCTGCCCAC...AGCACTAACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp AGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGGAACTGGGGCTGGGGGTGGGCAGCAGCGGCTaGGGTGCGAAGGCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: RSRASGSFVPFCLELGLGVGSSG*GAKAPA
Trigger: GGCCGGAGCCTTCGCACCGCAGCCGCTGCTGCCCAC...CCCCAGCCCCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp GGCGCTGTAGGTCATGGAGCCCAGGGGCGCCCCCACAGGCCCGCCTGCCAGGCCTTGCACCCCACGTTGTaGAGCTGCAGTTTCCTAAAC +
Preference number: 4 (lower is better)
Translates to: GAVGHGAQGRPHRPACQALHPTL*SCSFLN
Trigger: GTTTAGGAAACTGCAGCTGCACAACGTGGGGTGCAA...GGCCTGGCAGGCGGGCCTGTGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CCA 90 bp GCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTGTCAGGAAGGGGTTCCGTCCTTGGGTTCCACATaGGGCTCCAGTGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: AERVGGGRSAETCQEGVPSLGST*GSSAGS
Trigger: GGAGCCCGCACTGGAGCCCCATGTGGAACCCAAGGA...CGGAACCCCTTCCTGACAGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CCA 90 bp GTGGTCCGCGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCGAGCAGCTGCATCCTTaGGTTCCACATGGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: VVRVQLPEPPRDTSRHWLEQLHP*VPHGAP
Trigger: TGGAGCCCCATGTGGAACCCAAGGATGCAGCTGCTC...GAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACGCGGACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CCA 90 bp ACCCCCACCTCAGGAAGGGGAGTGGCATTGTGCCTCTCCACTCACCGACTCTGGAGACTTGGAGGTGGGTaGCCCTCGCCCCCGCCGGAG +
Preference number: 4 (lower is better)
Translates to: TPTSGRGVALCLSTHRLWRLGGG*PSPPPE
Trigger: CTCCGGCGGGGGCGAGGGCCACCCACCTCCAAGTCT...CCAGAGTCGGTGAGTGGAGAGGCACAATGCCACTCCCCTTCCTGAGGTGGGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp TGGACCACGGCCCCTGCACCATTGGCCATGGGGGAGCCATCACCCTGCCAGGACTCATGGCTGGAGACTTaGAGGTGGGTGGCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: WTTAPAPLAMGEPSPCQDSWLET*RWVALA
Trigger: GGCGAGGGCCACCCACCTCCAAGTCTCCAGCCATGA...GTCCTGGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGTGGTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CCA 90 bp AGGCCCAGCGCCGGCGAGCCGGTGCGCATCTGGTTTAGCGTCGGCCTGCCCGGCTCGCGGTCGATGTACTaGAAGTCCTTGAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: RPSAGEPVRIWFSVGLPGSRSMY*KSLSVW
Trigger: CCAGACACTCAAGGACTTCCAGTACATCGACCGCGA...GCCGGGCAGGCCGACGCTAAACCAGATGCGCACCGGCTCGCCGGCGCTGGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GCTCTCTGTCCCGCTGATGGTGGACCACGGCCCCTGCACCATTGGCCATGGGGGCTGCACCATTGGCCATaGGGGAGCCATCACCCTGCC +
Preference number: 4 (lower is better)
Translates to: ALCPADGGPRPLHHWPWGLHHWP*GSHHPA
Trigger: GGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAG...CCCCCATGGCCAATGGTGCAGGGGCCGTGGTCCACCATCAGCGGGACAGAGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CCA 90 bp AGGAGAGCATGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCTGCCCAGCAGGCAGCACTaGGGTCCTGCCCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: RRAWESDPRAGFGTGRFLPSRQH*GPAPGL
Trigger: GAGCCCTGGGGCAGGACCCCAGTGCTGCCTGCTGGG...CAGGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCATGCTCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp TGGACCACGGCCCCTGCACCATTGGCCATGGGGGAGCCATCACCCTGCCAGGACGGTCAGCCCCAGTGCTaGGGAGTTTGTGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: WTTAPAPLAMGEPSPCQDGQPQC*GVCGGE
Trigger: CTCCCCACCACAAACTCCCCAGCACTGGGGCTGACC...GTCCTGGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGTGGTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CCA 90 bp CGGCCCCTGCACCATTGGCCATGGGGGAGCCATCACCCTGCCAGGACCTCACCTGGTCAGCCCCAGTGCTaGGGAGTTTGTGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: RPLHHWPWGSHHPARTSPGQPQC*GVCGGE
Trigger: CTCCCCACCACAAACTCCCCAGCACTGGGGCTGACC...AGGTGAGGTCCTGGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CCA 90 bp CTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGAGGGTGCTTGGAACTGGGGCTaGGGTCTCCAAACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LRCEGSGLREDANRGGEGAWNWG*GLQTGP
Trigger: TGGACCTGTTTGGAGACCCCAGCCCCAGTTCCAAGC...ACCCTCCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GCTGGCTTCGGGACAGGACGGTTCCTGAGGGGATCGGAGACCAGGGGTCTGCAGGAGCCGGTGCGCATCTaGTTTAGCGTCGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: AGFGTGRFLRGSETRGLQEPVRI*FSVGLP
Trigger: GGGCAGGCCGACGCTAAACCAGATGCGCACCGGCTC...CTGCAGACCCCTGGTCTCCGATCCCCTCAGGAACCGTCCTGTCCCGAAGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GCATGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCTGAGGGGAAGGCGCTGTAGGTCATaGAGCCCAGGGGCGCCCCCA +
Preference number: 4 (lower is better)
Translates to: AWESDPRAGFGTGRFLRGRRCRS*SPGAPP
Trigger: TGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCCT...TCCCCTCAGGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp TGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCTGAGGGGATCGCTCAGAGGAAGGGGTTaGTGCCGGTCTGCGGGGGCG +
Preference number: 4 (lower is better)
Translates to: WESDPRAGFGTGRFLRGSLRGRG*CRSAGA
Trigger: CGCCCCCGCAGACCGGCACCAACCCCTTCCTCTGAG...CGATCCCCTCAGGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CCA 90 bp CTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTGTCAGGAAGATACCAGCCGCCACTaGCTCGGCGTTCCACTAGCA +
Preference number: 4 (lower is better)
Translates to: LARAERVGGGRSAETCQEDTSRH*LGVPLA
Trigger: TGCTAGTGGAACGCCGAGCCAGTGGCGGCTGGTATC...TTCCTGACAGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CCA 90 bp GCCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCAAGGGGGATGGAGGCTaGCTGCAGGCTGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: AGDPRCGRDPAATPRKKSKGDGG*LQAACR
Trigger: TCTGCAGGCAGCCTGCAGCCAGCCTCCATCCCCCTT...GGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR TCA 90 bp CTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTGTCAGGAAGCGAGGTCACAGTCTTaGAGGATGGGCTGCCGTGTT +
Preference number: 4 (lower is better)
Translates to: LARAERVGGGRSAETCQEARSQS*RMGCRV
Trigger: AACACGGCAGCCCATCCTTCAAGACTGTGACCTCGC...TTCCTGACAGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp GGCCCCTGCACCATTGGCCATGGGGGAGCCATCACCCTGCCAGGACCTCACCTCGCTCGGAGCCCGTCTTaGGCAGGTAGTCCAGCAATG +
Preference number: 4 (lower is better)
Translates to: GPCTIGHGGAITLPGPHLARSPS*AGSPAM
Trigger: CATTGCTGGACTACCTGCTCAAGACGGGCTCCGAGC...GAGGTGAGGTCCTGGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
CDS-3UTR TCA 90 bp CCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCAGCCGCTCCTCATCCTTaGGCAGGGCCATCACCTGCT +
Preference number: 4 (lower is better)
Translates to: PVIHAVVETRPPHPAKSPAAPHP*AGPSPA
Trigger: AGCAGGTGATGGCCCTGCTCAAGGATGAGGAGCGGC...TGGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR TCA 90 bp TGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGGAAGCTGAGGGACCCCGCCGTAGCGGCGGCTaGAGCCCAGCTGCCCACTGC +
Preference number: 4 (lower is better)
Translates to: WGALTNESRLTKEEAEGPRRSGG*SPAAHC
Trigger: GCAGTGGGCAGCTGGGCTTCAGCCGCCGCTACGGCG...GGGTCCCTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp TGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCTGAGGGGATCGTGGGGGACGGAGCGCTaGGACCTGTCAGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: WESDPRAGFGTGRFLRGSWGTER*DLSGRG
Trigger: ACCCCTTCCTGACAGGTCTCAGCGCTCCGTCCCCCA...CGATCCCCTCAGGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp GTCCCGCTGATGGTGGACCACGGCCCCTGCACCATTGGCCATGGGGGAGCCATCTCTTCCCCTGACGTCTaGGGCCGGGCAGTTGTAGGA +
Preference number: 4 (lower is better)
Translates to: VPLMVDHGPCTIGHGGAISSPDV*GRAVVG
Trigger: TCCTACAACTGCCCGGCCTCAGACGTCAGGGGAAGA...GATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGTGGTCCACCATCAGCGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510045.5
CDS-3UTR GCA 90 bp TGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCTGAGGGGATCGCTTCCCGCGTGCGTTTaGCTCCTAGCCAGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: WESDPRAGFGTGRFLRGSLPACV*LLASAR
Trigger: CCTGGCGCTGGCTAGGAGGCAAACGCACGCGGGAAG...CGATCCCCTCAGGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
CDS-3UTR GCA 90 bp GGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGGGAGGCTCCCCAAGGGTCCACTGCCAATGCCGATaGCCTCCAGTGCCATGCGCT +
Preference number: 4 (lower is better)
Translates to: GRGTTRCVGGLQGGSPRVHCQCR*PPVPCA
Trigger: AGCGCATGGCACTGGAGGGCATCGGCATTGGCAGTG...GACCCTTGGGGAGCCTCCCTGGAGACCTCCGACACACCTGGTGGTGCCTCGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp CCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCAGGGGACAGGCTTCTCTaGCTCCTCACGGCTCATGGC +
Preference number: 4 (lower is better)
Translates to: PVIHAVVETRPPHPAKSPGDRLL*LLTAHG
Trigger: GCCATGAGCCGTGAGGAGGCAGAGAAGCCTGTCCCC...TGGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268933.8
ENST00000537145.2
CDS-3UTR GCA 90 bp TGCGGGCGTTCAGTTTCTAGCTCCCGGGCCGTGGTCCGCGTCCAGCTTCCAGAGAGAGCCAGCTGCAGCTaGAGGTCCTCGTCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: CGRSVSSSRAVVRVQLPERASCS*RSSSLW
Trigger: CCACAGGGACGAGGACCTGCAGCTGCAGCTGGCTCT...CTCTGGAAGCTGGACGCGGACCACGGCCCGGGAGCTAGAAACTGAACGCCCGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR GCA 90 bp GCATGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCTGAGGGGACGGAGACCAGGGGTCTaGAGAAGGCCCCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: AWESDPRAGFGTGRFLRGRRPGV*RRPPGG
Trigger: TCCTCCTGGGGGCCTTCTGCAGACCCCTGGTCTCCG...TCCCCTCAGGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp GTGGTCCGCGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCTCCTTCGTGCCATTTTaGTTGGAACTGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VVRVQLPEPPRDTSRHWLSFVPF*LELGLG
Trigger: CCCCAGCCCCAGTTCCAAGCAAAATGGCACGAAGGA...GAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACGCGGACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR GCA 90 bp CTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGAGGGTTCCTTCGTGCCATTTTaGTTGGAACTGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LRCEGSGLREDANRGGEGSFVPF*LELGLG
Trigger: CCCCAGCCCCAGTTCCAAGCAAAATGGCACGAAGGA...ACCCTCCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp CAGAGAGGCGCTGTAGGTCATGGAGCCCAGGGGCGCCCCCACAGGCCCGCCTGCCTTTGCAACCTGGGGTaGCTTGACCAACGAGTCAAG +
Preference number: 4 (lower is better)
Translates to: QRGAVGHGAQGRPHRPACLCNLG*LDQRVK
Trigger: CTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAAG...GCAGGCGGGCCTGTGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCCTCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp TATGCGGGCGTTCAGTTTCTAGCTCCCGGGCCGTGGTCCGCGTCCCGGCTGAGCGGGGTTCCGGGTCTTTaGAACCTGGGGTGCCTTGAC +
Preference number: 4 (lower is better)
Translates to: YAGVQFLAPGPWSASRLSGVPGL*NLGCLD
Trigger: GTCAAGGCACCCCAGGTTGCAAAGACCCGGAACCCC...GCTCAGCCGGGACGCGGACCACGGCCCGGGAGCTAGAAACTGAACGCCCGCATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537145.2
CDS-3UTR GCA 90 bp GGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCGGTTTAGCGTCGGCCTaGCCGGCTCGCCCGCGCCGA +
Preference number: 4 (lower is better)
Translates to: GLANGSKVEAPPGVSEVSGLASA*PARPRR
Trigger: TCGGCGCGGGCGAGCCGGGCAGGCCGACGCTAAACC...GGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp GGCCTAAAACCTGGGATGTCCCATGGGTCAGCAGAGCAGTGTGTGGAGGGCGGGGCGCCGGCGAGCCGGTaGGCATCTGGTTTAGCGTCG +
Preference number: 4 (lower is better)
Translates to: GLKPGMSHGSAEQCVEGGAPASR*ASGLAS
Trigger: CGACGCTAAACCAGATGCGCACCGGCTCGCCGGCGC...CCCGCCCTCCACACACTGCTCTGCTGACCCATGGGACATCCCAGGTTTTAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp GCCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCCACAGCCGCATCACGTaGCCCTGGCTTGTCTACCCT +
Preference number: 4 (lower is better)
Translates to: AGDPRCGRDPAATPRKKSHSRIT*PWLVYP
Trigger: AGGGTAGACAAGCCAGGGGCACGTGATGCGGCTGTG...GGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp TGCGGGCGTTCAGTTTCTAGCTCCCGGGCCGTGGTCCGCGTCCAGCTTCCAGAGTCCTTGGGTTCCACATaGGGCTCCAGTGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: CGRSVSSSRAVVRVQLPESLGST*GSSAGS
Trigger: GGAGCCCGCACTGGAGCCCCATGTGGAACCCAAGGA...CTCTGGAAGCTGGACGCGGACCACGGCCCGGGAGCTAGAAACTGAACGCCCGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CCA 90 bp GGATACCAGCCGCCACTGGCTCGGCGTTCCACTAGCACCGGCGCCCCGCCCAGCCACAGTCTTGAAGGATaGGCTGCCGTGTTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: GYQPPLARRSTSTGAPPSHSLEG*AAVLAE
Trigger: CTCTGCTAACACGGCAGCCCATCCTTCAAGACTGTG...GCTGGGCGGGGCGCCGGTGCTAGTGGAACGCCGAGCCAGTGGCGGCTGGTATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CCA 90 bp TCATCCTTGAGCAGGGCCATCACCTGCTTGACCTTCTCGCGCACGTTGACGCCCAGACTTGGAGGTGGGTaGCCCTCGCCCCCGCCGGAG +
Preference number: 4 (lower is better)
Translates to: SSLSRAITCLTFSRTLTPRLGGG*PSPPPE
Trigger: CTCCGGCGGGGGCGAGGGCCACCCACCTCCAAGTCT...GGGCGTCAACGTGCGCGAGAAGGTCAAGCAGGTGATGGCCCTGCTCAAGGATGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CCA 90 bp AGACCCGGCCGCCACACCCCGCAAAAAGTCCACTTGGTGAGAGCTGAGAACGAGCTGGAGACTTGGAGGTaGGTGGCCCTCGCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: RPGRHTPQKVHLVRAENELETWR*VALAPA
Trigger: GGCGGGGGCGAGGGCCACCCACCTCCAAGTCTCCAG...CTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTGGCGGCCGGGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CCA 90 bp GCCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCGTGCGGAGGTCGTCATaGCTGGAGACTTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: AGDPRCGRDPAATPRKKSVRRSS*LETWRW
Trigger: CCACCTCCAAGTCTCCAGCCATGACGACCTCCGCAC...GGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CCA 90 bp CAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGGGAGGCTCCCCAAGGTCCCTGTGGGAGGCTaGGGGGACAGGCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: QRSRHHQVCRRSPGRLPKVPVGG*GDRLLC
Trigger: GCAGAGAAGCCTGTCCCCCCAGCCTCCCACAGGGAC...CTTGGGGAGCCTCCCTGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GCTGGGTTAGTGCTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGCCCAGCAGGCAGCACTaGGGTCCTGCCCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: AGLVLPLVCPGPGHLAPSPSRQH*GPAPGL
Trigger: GAGCCCTGGGGCAGGACCCCAGTGCTGCCTGCTGGG...CGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAGCACTAACCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp AGACCCGGCCGCCACACCCCGCAAAAAGTCCACTTGGTGAGAGCTGAGAACGAGCCCAGGGGTCTGTGGTaGGGGGCCCAGCAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RPGRHTPQKVHLVRAENEPRGLW*GAQQAA
Trigger: TGCTGCCTGCTGGGCCCCCCACCACAGACCCCTGGG...CTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTGGCGGCCGGGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CCA 90 bp GTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGGGAGGCTCCCCAGAGCCGGTGCGCATCTaGTTTAGCGTCGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: VKGRGTTRCVGGLQGGSPEPVRI*FSVGLP
Trigger: GGGCAGGCCGACGCTAAACCAGATGCGCACCGGCTC...TGGGGAGCCTCCCTGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGGGAGGCTCCCCAGAGGGTCAAGCCAGCTaGCACGCTGCTGAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: VKGRGTTRCVGGLQGGSPEGQAS*HAAERE
Trigger: CTCCCGCTCAGCAGCGTGCCAGCTGGCTTGACCCTC...TGGGGAGCCTCCCTGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGGGAGGCTCCCCAAGGAGGGTCAAGCCAGCTaGCACGCTGCTGAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: QRSRHHQVCRRSPGRLPKEGQAS*HAAERE
Trigger: CTCCCGCTCAGCAGCGTGCCAGCTGGCTTGACCCTC...CTTGGGGAGCCTCCCTGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp TGCGGGCGTTCAGTTTCTAGCTCCCGGGCCGTGGTCCGCGTCCAGCTTCCAGAGCGCATCACGTGCCCCTaGCTTGTCTACCCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: CGRSVSSSRAVVRVQLPERITCP*LVYPAA
Trigger: CGCAGCAGGGTAGACAAGCCAGGGGCACGTGATGCG...CTCTGGAAGCTGGACGCGGACCACGGCCCGGGAGCTAGAAACTGAACGCCCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR TCA 90 bp GGGAAGACGCTAACCGAGGCGGGGAGGGTCAAGCCAGCTGGCACGCTGCTGAGCGCGAGGTCACAGTCTTaGAGGATGGGCTGCCGTGTT +
Preference number: 4 (lower is better)
Translates to: GKTLTEAGRVKPAGTLLSARSQS*RMGCRV
Trigger: AACACGGCAGCCCATCCTTCAAGACTGTGACCTCGC...GCTCAGCAGCGTGCCAGCTGGCTTGACCCTCCCCGCCTCGGTTAGCGTCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp CAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGGGAGGCTCCCCAAGTCTTGCCGCTGTCATTaGGCCGCCGCCACAGCATGC +
Preference number: 4 (lower is better)
Translates to: QRSRHHQVCRRSPGRLPKSCRCH*AAATAC
Trigger: GCATGCTGTGGCGGCGGCTCAATGACAGCGGCAAGA...CTTGGGGAGCCTCCCTGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp AGGAGCCTGGGAGCTCCTGCACTTGGCTTCTGCCACAGCCGCATCACGTGCCCCGCTCGGAGCCCGTCTTaGGCAGGTAGTCCAGCAATG +
Preference number: 4 (lower is better)
Translates to: RSLGAPALGFCHSRITCPARSPS*AGSPAM
Trigger: CATTGCTGGACTACCTGCTCAAGACGGGCTCCGAGC...GGGGCACGTGATGCGGCTGTGGCAGAAGCCAAGTGCAGGAGCTCCCAGGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR TCA 90 bp TCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGCGCCGTAGCGGCGGCTaGAGCCCAGCTGCCCACTGC +
Preference number: 4 (lower is better)
Translates to: SPSMPRSRASGSFVPFCLRRSGG*SPAAHC
Trigger: GCAGTGGGCAGCTGGGCTTCAGCCGCCGCTACGGCG...CAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp ACGTCTGAGGCCGGGCCTGCTCCAGGTCGGAGGTATAGCGGGGTGACGAAGAGGGACCAAGGAGGAAGCTaGGGGACCCAGGAAGGACTC +
Preference number: 4 (lower is better)
Translates to: TSEAGPAPGRRYSGVTKRDQGGS*GTQEGL
Trigger: GAGTCCTTCCTGGGTCCCTCAGCTTCCTCCTTGGTC...CCTCTTCGTCACCCCGCTATACCTCCGACCTGGAGCAGGCCCGGCCTCAGACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
CDS-3UTR TCA 90 bp GTGGTCCGCGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCTGTCCAGTGGTCCAGTaGTCAGGGAGCATTGAGAAG +
Preference number: 4 (lower is better)
Translates to: VVRVQLPEPPRDTSRHWLCPVVQ*SGSIEK
Trigger: CTTCTCAATGCTCCCTGATCACTGGACCACTGGACA...GAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACGCGGACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR GCA 90 bp CTTCGGGACAGGACGGTTCCTGAGGGGATCGGAGACCAGGGGTCTGCAGAAGGCAGCCCGAGTAGCCTCTaGGGTGACCCTCCGACCTGT +
Preference number: 4 (lower is better)
Translates to: LRDRTVPEGIGDQGSAEGSPSSL*GDPPTC
Trigger: ACAGGTCGGAGGGTCACCGCAGAGGCTACTCGGGCT...GCCTTCTGCAGACCCCTGGTCTCCGATCCCCTCAGGAACCGTCCTGTCCCGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
CDS-3UTR GCA 90 bp AAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTGCTTGGCTGGGTTAGTGCTCACCTGGCGCCGGAGTaGGGAGGTCGTCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: KDSGVRQARASLLGWVSAHLAPE*GGRHGW
Trigger: CCAGCCATGACGACCTCCGCACTCCGGCGCCAGGTG...AGCACTAACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp CTTGGCTGGGTTAGTGCTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCCACCTGGCGCCGGAGTaGGGAGGTCGTCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: LGWVSASPSMPRSRASGSHLAPE*GGRHGW
Trigger: CCAGCCATGACGACCTCCGCACTCCGGCGCCAGGTG...GGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAGCACTAACCCAGCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp ACGTCTGAGGCCGGGCCTGCTCCAGGTCGGAGGTATAGCGGGGTGACGAAGAGGGCCGATGCCCTCCAGTaGCATGCGCTCCTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: TSEAGPAPGRRYSGVTKRADALQ*HALLGL
Trigger: AAGACCAAGGAGCGCATGGCACTGGAGGGCATCGGC...CCTCTTCGTCACCCCGCTATACCTCCGACCTGGAGCAGGCCCGGCCTCAGACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
CDS-3UTR GCA 90 bp GCTGGCTTCGGGACAGGACGGTTCCTGAGGGGATCGGAGACCAGGGGTCTGCAGCACTGCCAATGCCGATaGCCTCCAGTGCCATGCGCT +
Preference number: 4 (lower is better)
Translates to: AGFGTGRFLRGSETRGLQHCQCR*PPVPCA
Trigger: AGCGCATGGCACTGGAGGGCATCGGCATTGGCAGTG...CTGCAGACCCCTGGTCTCCGATCCCCTCAGGAACCGTCCTGTCCCGAAGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp CAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGGGAGGCTCCCCAAGAGAGCCAGCTGCAGCTaGAGGTCCTCGTCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: QRSRHHQVCRRSPGRLPKRASCS*RSSSLW
Trigger: CCACAGGGACGAGGACCTGCAGCTGCAGCTGGCTCT...CTTGGGGAGCCTCCCTGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp GTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGGGAGGCTCCCCAAGAGCCAGCTGCAGCTaGAGGTCCTCGTCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: VKGRGTTRCVGGLQGGSPRASCS*RSSSLW
Trigger: CCACAGGGACGAGGACCTGCAGCTGCAGCTGGCTCT...TGGGGAGCCTCCCTGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp CTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCAAGGCGCAGAGCCAGCTaGAGCTGCAGGTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: LQFPKQPVIHAVVETRPPRRRAS*SCRSSS
Trigger: GGACGAGGACCTGCAGCTGCAGCTGGCTCTGCGCCT...TGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268933.8
ENST00000537145.2
CDS-3UTR GCA 90 bp TGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCTGAGGGGATCGGGGGAGCCATCACCCTaGCAGGACCTCACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: WESDPRAGFGTGRFLRGSGEPSP*QDLTSF
Trigger: GAAGGAGGTGAGGTCCTGGCAGGGTGATGGCTCCCC...CGATCCCCTCAGGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp TGCGGGCGTTCAGTTTCTAGCTCCCGGGCCGTGGTCCGCGTCCAGCTTCCAGAGAAGGGTCAGCCCCAGTaGTGGGGAGTTTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: CGRSVSSSRAVVRVQLPEKGQPQ*WGVCGG
Trigger: CCCACCACAAACTCCCCAGCACTGGGGCTGACCCTT...CTCTGGAAGCTGGACGCGGACCACGGCCCGGGAGCTAGAAACTGAACGCCCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR GCA 90 bp GTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCACTTCCAGCTCCACAGGGCTaGTGGGCTTCCCAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: VIHAVVETRPPHPAKSPLPAPQG*WASQRA
Trigger: TGCCCTCTGGGAAGCCCAGCAGCCCTGTGGAGCTGG...AAGTGGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR GCA 90 bp GGACCACGGCCCCTGCACCATTGGCCATGGGGGAGCCATCACCCTGCCAGGACCTCCTTCGTGCCATTTTaGTTGGAACTGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GPRPLHHWPWGSHHPARTSFVPF*LELGLG
Trigger: CCCCAGCCCCAGTTCCAAGCAAAATGGCACGAAGGA...GGTCCTGGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGTGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
CDS-3UTR GCA 90 bp AGGAGCCTGGGAGCTCCTGCACTTGGCTTCTGCCACAGCCGCATCACGTGCCCCGGGGTTCCGGGTCTTTaGAACCTGGGGTGCCTTGAC +
Preference number: 4 (lower is better)
Translates to: RSLGAPALGFCHSRITCPGVPGL*NLGCLD
Trigger: GTCAAGGCACCCCAGGTTGCAAAGACCCGGAACCCC...GGGGCACGTGATGCGGCTGTGGCAGAAGCCAAGTGCAGGAGCTCCCAGGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR GCA 90 bp AAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTGCTTGGCTGGGTTAGTGCTGCGCCGGCGAGCCGGTaGGCATCTGGTTTAGCGTCG +
Preference number: 4 (lower is better)
Translates to: KDSGVRQARASLLGWVSAAPASR*ASGLAS
Trigger: CGACGCTAAACCAGATGCGCACCGGCTCGCCGGCGC...AGCACTAACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp CTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCAAGGCTGGCTGCAGGCTaGCTGCAGAGCCAGACCCCA +
Preference number: 4 (lower is better)
Translates to: LQFPKQPVIHAVVETRPPRLAAG*LQSQTP
Trigger: TGGGGTCTGGCTCTGCAGGCAGCCTGCAGCCAGCCT...TGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp CTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGAGGGTCACAGTCTTGAAGGATaGGCTGCCGTGTTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LRCEGSGLREDANRGGEGHSLEG*AAVLAE
Trigger: CTCTGCTAACACGGCAGCCCATCCTTCAAGACTGTG...ACCCTCCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGAGGGTCAAGCCAGCTGGCACGCACAGTCTTGAAGGATaGGCTGCCGTGTTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: PACGKTLTEAGRVKPAGTHSLEG*AAVLAE
Trigger: CTCTGCTAACACGGCAGCCCATCCTTCAAGACTGTG...CGTGCCAGCTGGCTTGACCCTCCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp ATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGGAACTGGGGAGACTTGGAGGTGGGTaGCCCTCGCCCCCGCCGGAG +
Preference number: 4 (lower is better)
Translates to: MPRSRASGSFVPFCLELGRLGGG*PSPPPE
Trigger: CTCCGGCGGGGGCGAGGGCCACCCACCTCCAAGTCT...CCCCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CTCCTTTCTCTCTTCTCTCTCAGGCTCTCTGTCCCGCTGATGGTGGACCACGGCTTCTCGCGGCACTGGTaGGCCACCCGCTCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LLSLFSLRLSVPLMVDHGFSRHW*ATRSEP
Trigger: GGGCTCCGAGCGGGTGGCCCACCAGTGCCGCGAGAA...GCCGTGGTCCACCATCAGCGGGACAGAGAGCCTGAGAGAGAAGAGAGAAAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CCA 90 bp GGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCTTCTCGCGGCACTGGTaGGCCACCCGCTCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GLANGSKVEAPPGVSEVSFSRHW*ATRSEP
Trigger: GGGCTCCGAGCGGGTGGCCCACCAGTGCCGCGAGAA...GGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GCTGGGTTAGTGCTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGAGGTTCTCGCGGCACTaGTGGGCCACCCGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: AGLVLPLVCPGPGHLAPSRFSRH*WATRSE
Trigger: CTCCGAGCGGGTGGCCCACCAGTGCCGCGAGAACCT...CGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAGCACTAACCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCGGCGTTCCTCGCGGTCGATGTACTaGAAGTCCTTGAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: RPASRAAAGYQPPLARRSSRSMY*KSLSVW
Trigger: CCAGACACTCAAGGACTTCCAGTACATCGACCGCGA...GGAACGCCGAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CCA 90 bp TGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCTGAGGGGATCGTTGGTCTTGAGGGCGTaGGTTCGCTCCTGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: WESDPRAGFGTGRFLRGSLVLRA*VRSCRS
Trigger: GCTGCGGCAGGAGCGAACCCACGCCCTCAAGACCAA...CGATCCCCTCAGGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCAGTCCCTGTGGGAGGCTaGGGGGACAGGCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LQFPKQPVIHAVVETRPPVPVGG*GDRLLC
Trigger: GCAGAGAAGCCTGTCCCCCCAGCCTCCCACAGGGAC...TGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268933.8
ENST00000537145.2
CDS-3UTR CCA 90 bp GGAGGAGAGCATGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCCTGCACCATTGGCCATaGGGGAGCCATCACCCTGCC +
Preference number: 4 (lower is better)
Translates to: GGEHGSQIPGLASGQDGSLHHWP*GSHHPA
Trigger: GGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAG...GGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCATGCTCTCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp AGCTCGGCGTGGGCAGCAGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACAGCCAAGTCCAGGATaGAGGACTGGCTGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: SSAWAAAAAVRRLRPAGRQPSPG*RTGWFL
Trigger: TAAAAACCAGCCAGTCCTCCATCCTGGACTTGGCTG...TCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTGCTGCCCACGCCGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512379.5
CDS-3UTR CCA 90 bp CTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGAGGGTTGGAGGTTTGGCAAATaGGTCAAAGGTCGAGGCACC +
Preference number: 4 (lower is better)
Translates to: LRCEGSGLREDANRGGEGWRFGK*VKGRGT
Trigger: GGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCA...ACCCTCCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CAGAGAGGCGCTGTAGGTCATGGAGCCCAGGGGCGCCCCCACAGGCCCGCCTGCCCTCCTTGGTCTCTGTaGATTCTGGAGGTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: QRGAVGHGAQGRPHRPACPPWSL*ILEVWQ
Trigger: TTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGG...GCAGGCGGGCCTGTGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCCTCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CGGCCCCTGCACCATTGGCCATGGGGGAGCCATCACCCTGCCAGGACCTCACCTGCTCCAGCCCCTCCTTaGTCTCTGTGGATTCTGGAG +
Preference number: 4 (lower is better)
Translates to: RPLHHWPWGSHHPARTSPAPAPP*SLWILE
Trigger: CTCCAGAATCCACAGAGACCAAGGAGGGGCTGGAGC...AGGTGAGGTCCTGGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CCA 90 bp GCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTGTCAGGAAGGGGTTCCGGCTTGGAACTGGGGCTaGGGTCTCCAAACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: AERVGGGRSAETCQEGVPAWNWG*GLQTGP
Trigger: TGGACCTGTTTGGAGACCCCAGCCCCAGTTCCAAGC...CGGAACCCCTTCCTGACAGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGAGGGTCAAGCCAGCTGGCACGGCCTCTTTGCTTGGCTaGGTTAGTGCTTCCCCTAGT +
Preference number: 4 (lower is better)
Translates to: PACGKTLTEAGRVKPAGTASLLG*VSASPS
Trigger: ACTAGGGGAAGCACTAACCCAGCCAAGCAAAGAGGC...CGTGCCAGCTGGCTTGACCCTCCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GGGAAGACGCTAACCGAGGCGGGGAGGGTCAAGCCAGCTGGCACGCTGCTGAGCCGGGTCTTTGCAACCTaGGGTGCCTTGACCAACGAG +
Preference number: 4 (lower is better)
Translates to: GKTLTEAGRVKPAGTLLSRVFAT*GALTNE
Trigger: CTCGTTGGTCAAGGCACCCCAGGTTGCAAAGACCCG...GCTCAGCAGCGTGCCAGCTGGCTTGACCCTCCCCGCCTCGGTTAGCGTCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CTTGGCTGGGTTAGTGCTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCAGGCGCTGTAGGTCATaGAGCCCAGGGGCGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LGWVSASPSMPRSRASGSRRCRS*SPGAPP
Trigger: TGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCCT...GGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAGCACTAACCCAGCCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp AGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGGAACTGGGGCTGGGGAGGCGCTGTAGGTCATaGAGCCCAGGGGCGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RSRASGSFVPFCLELGLGRRCRS*SPGAPP
Trigger: TGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCCT...CCCCAGCCCCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GGGTTAGTGCTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCTCAGAGGAAGGGGTTaGTGCCGGTCTGCGGGGGCG +
Preference number: 4 (lower is better)
Translates to: GLVLPLVCPGPGHLAPSCLRGRG*CRSAGA
Trigger: CGCCCCCGCAGACCGGCACCAACCCCTTCCTCTGAG...GCACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAGCACTAACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CCA 90 bp GCTCTCTGTCCCGCTGATGGTGGACCACGGCCCCTGCACCATTGGCCATGGGGGGAGCAGCTGCATCCTTaGGTTCCACATGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: ALCPADGGPRPLHHWPWGEQLHP*VPHGAA
Trigger: AGCAGCCCCATGTGGAACCCAAGGATGCAGCTGCTC...CCCCCATGGCCAATGGTGCAGGGGCCGTGGTCCACCATCAGCGGGACAGAGAGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000512291.5
CDS-3UTR TCA 90 bp GTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGGGAGGCTCCCCAGCTCGGAGCCCGTCTTaGGCAGGTAGTCCAGCAATG +
Preference number: 4 (lower is better)
Translates to: VKGRGTTRCVGGLQGGSPARSPS*AGSPAM
Trigger: CATTGCTGGACTACCTGCTCAAGACGGGCTCCGAGC...TGGGGAGCCTCCCTGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp CTTCGGGACAGGACGGTTCCTGAGGGGATCGGAGACCAGGGGTCTGCAGAAGGCGCTCGGAGCCCGTCTTaGGCAGGTAGTCCAGCAATG +
Preference number: 4 (lower is better)
Translates to: LRDRTVPEGIGDQGSAEGARSPS*AGSPAM
Trigger: CATTGCTGGACTACCTGCTCAAGACGGGCTCCGAGC...GCCTTCTGCAGACCCCTGGTCTCCGATCCCCTCAGGAACCGTCCTGTCCCGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp CCCGGCCGCCACACCCCGCAAAAAGTCCACTTGGTGAGAGCTGAGAACGAGGGTTGCGCTCCTTGGTCTTaGGGGCGTGGGTTCGCTCCT +
Preference number: 4 (lower is better)
Translates to: PGRHTPQKVHLVRAENEGCAPWS*GRGFAP
Trigger: AGGAGCGAACCCACGCCCTCAAGACCAAGGAGCGCA...ACCCTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTGGCGGCCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR TCA 90 bp GTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGTCGAGACCCGGTGGGGGACGGAGCGCTaGGACCTGTCAGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: VQLQFPKQPVIHAVVETRWGTER*DLSGRG
Trigger: ACCCCTTCCTGACAGGTCTCAGCGCTCCGTCCCCCA...CCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR GCA 90 bp ACCCCCACCTCAGGAAGGGGAGTGGCATTGTGCCTCTCCACTCACCGACTCTGGAGCCCGAGTAGCCTCTaGGGTGACCCTCCGACCTGT +
Preference number: 4 (lower is better)
Translates to: TPTSGRGVALCLSTHRLWSPSSL*GDPPTC
Trigger: ACAGGTCGGAGGGTCACCGCAGAGGCTACTCGGGCT...CCAGAGTCGGTGAGTGGAGAGGCACAATGCCACTCCCCTTCCTGAGGTGGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR GCA 90 bp TTCGGGACAGGACGGTTCCTGAGGGGATCGGAGACCAGGGGTCTGCAGAAGGCCGCCGATGCCCTCCAGTaGCATGCGCTCCTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: FGTGRFLRGSETRGLQKAADALQ*HALLGL
Trigger: AAGACCAAGGAGCGCATGGCACTGGAGGGCATCGGC...GGCCTTCTGCAGACCCCTGGTCTCCGATCCCCTCAGGAACCGTCCTGTCCCGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp CTTGGCTGGGTTAGTGCTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTCCTTCTCGTGCTCCTaGCGGCTCAGGCGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LGWVSASPSMPRSRASGSSFSCS*RLRRRA
Trigger: GGCTCTGCGCCTGAGCCGGCAGGAGCACGAGAAGGA...GGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAGCACTAACCCAGCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp AGGAAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTGCTTGGCTGGGTTAGTCTCACCTCCTTCTCGTaGTCCTGCCGGCTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: RKDSGVRQARASLLGWVSLTSFS*SCRLRR
Trigger: GCGCCTGAGCCGGCAGGAGCACGAGAAGGAGGTGAG...ACTAACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp CAGGCCTTGGAGCCAGACTGTCTGACTCTTGAGTTCCAGCCCCGCCCCATGCCAGGGGAGCCATCACCCTaGCAGGACCTCACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QALEPDCLTLEFQPRPMPGEPSP*QDLTSF
Trigger: GAAGGAGGTGAGGTCCTGGCAGGGTGATGGCTCCCC...TGGCATGGGGCGGGGCTGGAACTCAAGAGTCAGACAGTCTGGCTCCAAGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR GCA 90 bp CTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTGTCAGGAAAAGCTCGGGCCTCTTTaGTTGGCTGGGTTAGTGCTT +
Preference number: 4 (lower is better)
Translates to: LARAERVGGGRSAETCQEKLGPL*LAGLVL
Trigger: AAGCACTAACCCAGCCAAGCAAAGAGGCCCGAGCTT...TTCCTGACAGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp GCTCCAGCCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAGTGGGCAGCAGCGGCTaGGGTGCGAAGGCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: APAPPWSLWILEVWQMGQVGSSG*GAKAPA
Trigger: GGCCGGAGCCTTCGCACCGCAGCCGCTGCTGCCCAC...TTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGGCTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CCCCCAGGAGGATCCACTGGCCTCTGTGTTCGGCCTAAAACCTGGCTGGTTTTTCTGGAGACTTGGAGGTaGGTGGCCCTCGCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: PPGGSTGLCVRPKTWLVFLETWR*VALAPA
Trigger: GGCGGGGGCGAGGGCCACCCACCTCCAAGTCTCCAG...AAAAACCAGCCAGGTTTTAGGCCGAACACAGAGGCCAGTGGATCCTCCTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512291.5
CDS-3UTR CCA 90 bp GCATGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCTGAGGGGAGTGCGGAGGTCGTCATaGCTGGAGACTTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: AWESDPRAGFGTGRFLRGVRRSS*LETWRW
Trigger: CCACCTCCAAGTCTCCAGCCATGACGACCTCCGCAC...TCCCCTCAGGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp TTCGGGACAGGACGGTTCCTGAGGGGATCGGAGACCAGGGGTCTGCAGAAGGCCGTCAGATCCCAGGGCTaGCTTCGGGACAGGACGGTT +
Preference number: 4 (lower is better)
Translates to: FGTGRFLRGSETRGLQKAVRSQG*LRDRTV
Trigger: AACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGAC...GGCCTTCTGCAGACCCCTGGTCTCCGATCCCCTCAGGAACCGTCCTGTCCCGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CAGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGTGGATTCTGGAGGTTTaGCAAATGGGTCAAAGGTCG +
Preference number: 4 (lower is better)
Translates to: QRLRCEGSGLREDANRGGWILEV*QMGQRS
Trigger: CGACCTTTGACCCATTTGCCAAACCTCCAGAATCCA...CCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GGCTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTGTCAGGTGGATTCTGGAGGTTTaGCAAATGGGTCAAAGGTCG +
Preference number: 4 (lower is better)
Translates to: GSPAPNGLVGDGALRPVRWILEV*QMGQRS
Trigger: CGACCTTTGACCCATTTGCCAAACCTCCAGAATCCA...CCTGACAGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGAGGGTGGTCTCTGTGGATTCTaGAGGTTTGGCAAATGGGTC +
Preference number: 4 (lower is better)
Translates to: LRCEGSGLREDANRGGEGGLCGF*RFGKWV
Trigger: GACCCATTTGCCAAACCTCCAGAATCCACAGAGACC...ACCCTCCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GCCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCCAGGTCCAGGGCATCTaGCTCCTTCGTGCCATTTTG +
Preference number: 4 (lower is better)
Translates to: AGDPRCGRDPAATPRKKSQVQGI*LLRAIL
Trigger: CAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTG...GGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CCA 90 bp AGACCCGGCCGCCACACCCCGCAAAAAGTCCACTTGGTGAGAGCTGAGAACGAGGAGGGTCAAGCCAGCTaGCACGCTGCTGAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: RPGRHTPQKVHLVRAENEEGQAS*HAAERE
Trigger: CTCCCGCTCAGCAGCGTGCCAGCTGGCTTGACCCTC...CTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTGGCGGCCGGGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CCA 90 bp ACTTGGCTTCTGCCACAGCCGCATCACGTGCCCCTGGCTTGTCTACCCTGCTGCATCTGGGGCCCAGCCTaGGATCTCCAGGCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: TWLLPQPHHVPLACLPCCIWGPA*DLQALE
Trigger: CTCCAAGGCCTGGAGATCCCAGGCTGGGCCCCAGAT...GCAGCAGGGTAGACAAGCCAGGGGCACGTGATGCGGCTGTGGCAGAAGCCAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp GTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGTCGAGACCCGGCAGGATGGAGGACTGTaGAGGGGAGAGGCAGCCGCG +
Preference number: 4 (lower is better)
Translates to: VQLQFPKQPVIHAVVETRQDGGL*RGEAAA
Trigger: CGCGGCTGCCTCTCCCCTCCACAGTCCTCCATCCTG...CCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537145.2
CDS-3UTR TCA 90 bp GTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGGGAGGCTCCCCAGCGAGGTCACAGTCTTaGAGGATGGGCTGCCGTGTT +
Preference number: 4 (lower is better)
Translates to: VKGRGTTRCVGGLQGGSPARSQS*RMGCRV
Trigger: AACACGGCAGCCCATCCTTCAAGACTGTGACCTCGC...TGGGGAGCCTCCCTGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp CAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGGGAGGCTCCCCAAGTGGCCTCGCGCACCTTaGTTTCTGCCTCGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: QRSRHHQVCRRSPGRLPKWPRAP*FLPRSS
Trigger: ACTACTCCGAGGCAGAAATCAAGGTGCGCGAGGCCA...CTTGGGGAGCCTCCCTGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp AAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTGCTTGGCTGGGTTAGTGCTTCTTGCCGCTGTCATTaGGCCGCCGCCACAGCATGC +
Preference number: 4 (lower is better)
Translates to: KDSGVRQARASLLGWVSASCRCH*AAATAC
Trigger: GCATGCTGTGGCGGCGGCTCAATGACAGCGGCAAGA...AGCACTAACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp GCTGGGTTAGTGCTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTCTTGCCGCTGTCATTaGGCCGCCGCCACAGCATGC +
Preference number: 4 (lower is better)
Translates to: AGLVLPLVCPGPGHLAPSSCRCH*AAATAC
Trigger: GCATGCTGTGGCGGCGGCTCAATGACAGCGGCAAGA...CGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAGCACTAACCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp CTTGGCTGGGTTAGTGCTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTCTTGCCGCTGTCATTaGGCCGCCGCCACAGCATGC +
Preference number: 4 (lower is better)
Translates to: LGWVSASPSMPRSRASGSSCRCH*AAATAC
Trigger: GCATGCTGTGGCGGCGGCTCAATGACAGCGGCAAGA...GGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAGCACTAACCCAGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp GGGTTAGTGCTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCTCTTGCCGCTGTCATTaGGCCGCCGCCACAGCATGC +
Preference number: 4 (lower is better)
Translates to: GLVLPLVCPGPGHLAPSCSCRCH*AAATAC
Trigger: GCATGCTGTGGCGGCGGCTCAATGACAGCGGCAAGA...GCACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAGCACTAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp TCATCCTTGAGCAGGGCCATCACCTGCTTGACCTTCTCGCGCACGTTGACGCCCGCCGCTCCTCATCCTTaGGCAGGGCCATCACCTGCT +
Preference number: 4 (lower is better)
Translates to: SSLSRAITCLTFSRTLTPAAPHP*AGPSPA
Trigger: AGCAGGTGATGGCCCTGCTCAAGGATGAGGAGCGGC...GGGCGTCAACGTGCGCGAGAAGGTCAAGCAGGTGATGGCCCTGCTCAAGGATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
CDS-3UTR TCA 90 bp GTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGTCGAGACCCGGGCCGCTCCTCATCCTTaGGCAGGGCCATCACCTGCT +
Preference number: 4 (lower is better)
Translates to: VQLQFPKQPVIHAVVETRAAPHP*AGPSPA
Trigger: AGCAGGTGATGGCCCTGCTCAAGGATGAGGAGCGGC...CCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR TCA 90 bp GTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGTCGAGACCCGGTGCGCTCCTTGGTCTTaGGGGCGTGGGTTCGCTCCT +
Preference number: 4 (lower is better)
Translates to: VQLQFPKQPVIHAVVETRCAPWS*GRGFAP
Trigger: AGGAGCGAACCCACGCCCTCAAGACCAAGGAGCGCA...CCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR GCA 90 bp TCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGCACCTGGCGCCGGAGTaGGGAGGTCGTCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: SGGLANGSKVEAPPGVSEHLAPE*GGRHGW
Trigger: CCAGCCATGACGACCTCCGCACTCCGGCGCCAGGTG...CTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp CGGCCCCTGCACCATTGGCCATGGGGGAGCCATCACCCTGCCAGGACCTCACCTGCGCACCTTGATTTCTaGCTCGGAGTAGTTGTGCAC +
Preference number: 4 (lower is better)
Translates to: RPLHHWPWGSHHPARTSPAHLDF*LGVVVH
Trigger: GTGCACAACTACTCCGAGGCAGAAATCAAGGTGCGC...AGGTGAGGTCCTGGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510045.5
CDS-3UTR GCA 90 bp CCCGGCCGCCACACCCCGCAAAAAGTCCACTTGGTGAGAGCTGAGAACGAGGGTAGCAGGGCCATCACCTaGTTGACCTTCTCGCGCACG +
Preference number: 4 (lower is better)
Translates to: PGRHTPQKVHLVRAENEGSRAIT*LTFSRT
Trigger: CGTGCGCGAGAAGGTCAAGCAGGTGATGGCCCTGCT...ACCCTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTGGCGGCCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR GCA 90 bp TCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGGCGTGGGTTCGCTCCTaGCGCAGCCGCTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: SPSMPRSRASGSFVPFCLAWVRS*RSRSSS
Trigger: GGATGAGGAGCGGCTGCGGCAGGAGCGAACCCACGC...CAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp CTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACTGCCAATGCCGATaGCCTCCAGTGCCATGCGCT +
Preference number: 4 (lower is better)
Translates to: LQFPKQPVIHAVVETRPPHCQCR*PPVPCA
Trigger: AGCGCATGGCACTGGAGGGCATCGGCATTGGCAGTG...TGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR GCA 90 bp GCACCCCACGTTGTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGTCCTTCTCGTGCTCCTaGCGGCTCAGGCGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: APHVVQLQFPKQPVIHAVSFSCS*RLRRRA
Trigger: GGCTCTGCGCCTGAGCCGGCAGGAGCACGAGAAGGA...CACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCACAACGTGGGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268933.8
ENST00000537145.2
CDS-3UTR GCA 90 bp AGTCTTTATTATGCGGGCGTTCAGTTTCTAGCTCCCGGGCCGTGGTCCGCGTCCCTCACCTCCTTCTCGTaGTCCTGCCGGCTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: SLYYAGVQFLAPGPWSASLTSFS*SCRLRR
Trigger: GCGCCTGAGCCGGCAGGAGCACGAGAAGGAGGTGAG...GGACGCGGACCACGGCCCGGGAGCTAGAAACTGAACGCCCGCATAATAAAGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268933.8
ENST00000537145.2
CDS-3UTR GCA 90 bp AGGAAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTGCTTGGCTGGGTTAGTGGGGAGCCATCACCCTaGCAGGACCTCACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RKDSGVRQARASLLGWVSGEPSP*QDLTSF
Trigger: GAAGGAGGTGAGGTCCTGGCAGGGTGATGGCTCCCC...ACTAACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp CAGGAGGATCCACTGGCCTCTGTGTTCGGCCTAAAACCTGGGATGTCCCATGGGCCAGCTCCACAGGGCTaGTGGGCTTCCCAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: QEDPLASVFGLKPGMSHGPAPQG*WASQRA
Trigger: TGCCCTCTGGGAAGCCCAGCAGCCCTGTGGAGCTGG...CCCATGGGACATCCCAGGTTTTAGGCCGAACACAGAGGCCAGTGGATCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp GTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGGGAGGCTCCCCAGTGCTTCCCCTAGTATaGCCAGGTCCAGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: VKGRGTTRCVGGLQGGSPVLPLV*PGPGHL
Trigger: CAGATGCCCTGGACCTGGGCATACTAGGGGAAGCAC...TGGGGAGCCTCCCTGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp AGGCCCAGCGCCGGCGAGCCGGTGCGCATCTGGTTTAGCGTCGGCCTGCCCGGCTTCCAGTCTTTATTATaGGGGCGTTCAGTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: RPSAGEPVRIWFSVGLPGFQSLL*GRSVSS
Trigger: GCTAGAAACTGAACGCCCGCATAATAAAGACTGGAA...GCCGGGCAGGCCGACGCTAAACCAGATGCGCACCGGCTCGCCGGCGCTGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
CDS-3UTR GCA 90 bp CTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCAGCTTGTCTACCCTGCTaGGCTCGAGCTCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: LQFPKQPVIHAVVETRPPACLPC*ARAPGG
Trigger: ACCTCCAGGAGCTCGAGCGCAGCAGGGTAGACAAGC...TGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR GCA 90 bp CTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCACCTGCACTTGGCTTCTaGCACAGCCGCATCACGTGC +
Preference number: 4 (lower is better)
Translates to: LQFPKQPVIHAVVETRPPPALGF*HSRITC
Trigger: GCACGTGATGCGGCTGTGGCAGAAGCCAAGTGCAGG...TGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp GGGTTAGTGCTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCGCAGGGTCCCTGGAATaGGTAGCAGCTCTTCCCGCG +
Preference number: 4 (lower is better)
Translates to: GLVLPLVCPGPGHLAPSCAGSLE*VAALPA
Trigger: CGCGGGAAGAGCTGCTACCCATTCCAGGGACCCTGC...GCACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAGCACTAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CCA 90 bp CCCGGCCGCCACACCCCGCAAAAAGTCCACTTGGTGAGAGCTGAGAACGAGGGTCAGAGCCATCCACCATaGACCCTCGTCCCAGAGACC +
Preference number: 4 (lower is better)
Translates to: PGRHTPQKVHLVRAENEGQSHPP*TLVPET
Trigger: GGTCTCTGGGACGAGGGTCCATGGTGGATGGCTCTG...ACCCTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTGGCGGCCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268933.8
ENST00000512379.5
CDS-3UTR CCA 90 bp AACGAGGGTTCCAGTCTTTATTATGCGGGCGTTCAGTTTCTAGCTCCCGGGCCGAGACTTGGAGGTGGGTaGCCCTCGCCCCCGCCGGAG +
Preference number: 4 (lower is better)
Translates to: NEGSSLYYAGVQFLAPGPRLGGG*PSPPPE
Trigger: CTCCGGCGGGGGCGAGGGCCACCCACCTCCAAGTCT...CGGCCCGGGAGCTAGAAACTGAACGCCCGCATAATAAAGACTGGAACCCTCGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CCA 90 bp TTTGCACCCCACGTTGTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTCTGGAGACTTGGAGGTaGGTGGCCCTCGCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: FAPHVVQLQFPKQPVIHALETWR*VALAPA
Trigger: GGCGGGGGCGAGGGCCACCCACCTCCAAGTCTCCAG...AGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCACAACGTGGGGTGCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CCA 90 bp AGACCCGGCCGCCACACCCCGCAAAAAGTCCACTTGGTGAGAGCTGAGAACGAGTCATGGCTGGAGACTTaGAGGTGGGTGGCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: RPGRHTPQKVHLVRAENESWLET*RWVALA
Trigger: GGCGAGGGCCACCCACCTCCAAGTCTCCAGCCATGA...CTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTGGCGGCCGGGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CCA 90 bp CCTGCTCCAGGTCGGAGGTATAGCGGGGTGACGAAGAGGAGGAGTTGTAGGAGGTCATGGCTGGAGACTTaGAGGTGGGTGGCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: PAPGRRYSGVTKRRSCRRSWLET*RWVALA
Trigger: GGCGAGGGCCACCCACCTCCAAGTCTCCAGCCATGA...CCTCCTACAACTCCTCCTCTTCGTCACCCCGCTATACCTCCGACCTGGAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CCA 90 bp CCCGGCCGCCACACCCCGCAAAAAGTCCACTTGGTGAGAGCTGAGAACGAGGGTACGATGTTCTTCACCTaGCGCCGGAGTGCGGAGGTC +
Preference number: 4 (lower is better)
Translates to: PGRHTPQKVHLVRAENEGTMFFT*RRSAEV
Trigger: GACCTCCGCACTCCGGCGCCAGGTGAAGAACATCGT...ACCCTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTGGCGGCCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CCA 90 bp GTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCACTTACGATGTTCTTCACCTaGCGCCGGAGTGCGGAGGTC +
Preference number: 4 (lower is better)
Translates to: VIHAVVETRPPHPAKSPLTMFFT*RRSAEV
Trigger: GACCTCCGCACTCCGGCGCCAGGTGAAGAACATCGT...AAGTGGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CCA 90 bp TCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGAGGTTCTCGCGGCACTaGTGGGCCACCCGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: SPSMPRSRASGSFVPFCLRFSRH*WATRSE
Trigger: CTCCGAGCGGGTGGCCCACCAGTGCCGCGAGAACCT...CAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTGTCAGGAAGGGGTTCCGTCGCGGTCGATGTACTaGAAGTCCTTGAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: AERVGGGRSAETCQEGVPSRSMY*KSLSVW
Trigger: CCAGACACTCAAGGACTTCCAGTACATCGACCGCGA...CGGAACCCCTTCCTGACAGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp AGACCCGGCCGCCACACCCCGCAAAAAGTCCACTTGGTGAGAGCTGAGAACGAGTTGGTCTTGAGGGCGTaGGTTCGCTCCTGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: RPGRHTPQKVHLVRAENELVLRA*VRSCRS
Trigger: GCTGCGGCAGGAGCGAACCCACGCCCTCAAGACCAA...CTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTGGCGGCCGGGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CCA 90 bp AGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGGAACTGGGGCTGGGGTTGGTCTTGAGGGCGTaGGTTCGCTCCTGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: RSRASGSFVPFCLELGLGLVLRA*VRSCRS
Trigger: GCTGCGGCAGGAGCGAACCCACGCCCTCAAGACCAA...CCCCAGCCCCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp ATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGGAACTGGGGGTCCCTGTGGGAGGCTaGGGGGACAGGCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: MPRSRASGSFVPFCLELGVPVGG*GDRLLC
Trigger: GCAGAGAAGCCTGTCCCCCCAGCCTCCCACAGGGAC...CCCCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp TGCGGGCGTTCAGTTTCTAGCTCCCGGGCCGTGGTCCGCGTCCAGCTTCCAGAGGTTCGGCCTAAAACCTaGGATGTCCCATGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: CGRSVSSSRAVVRVQLPEVRPKT*DVPWVS
Trigger: GCTGACCCATGGGACATCCCAGGTTTTAGGCCGAAC...CTCTGGAAGCTGGACGCGGACCACGGCCCGGGAGCTAGAAACTGAACGCCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268933.8
ENST00000512379.5
CDS-3UTR CCA 90 bp CAGGCCTTGGAGCCAGACTGTCTGACTCTTGAGTTCCAGCCCCGCCCCATGCCAGTCAGATCCCAGGGCTaGCTTCGGGACAGGACGGTT +
Preference number: 4 (lower is better)
Translates to: QALEPDCLTLEFQPRPMPVRSQG*LRDRTV
Trigger: AACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGAC...TGGCATGGGGCGGGGCTGGAACTCAAGAGTCAGACAGTCTGGCTCCAAGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp AGGAGAGCATGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCTGGTCAGATCCCAGGGCTaGCTTCGGGACAGGACGGTT +
Preference number: 4 (lower is better)
Translates to: RRAWESDPRAGFGTGRFLVRSQG*LRDRTV
Trigger: AACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGAC...CAGGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCATGCTCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp AGAGCATGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCTGAGGGTCAGATCCCAGGGCTaGCTTCGGGACAGGACGGTT +
Preference number: 4 (lower is better)
Translates to: RAWESDPRAGFGTGRFLRVRSQG*LRDRTV
Trigger: AACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGAC...CCTCAGGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCATGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCAGTGCTGGGGAGTTTGTaGTGGGGAGAGTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LQFPKQPVIHAVVETRPPVLGSL*WGEFRA
Trigger: GGCCCTGAACTCTCCCCACCACAAACTCCCCAGCAC...TGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CCA 90 bp AGACCCGGCCGCCACACCCCGCAAAAAGTCCACTTGGTGAGAGCTGAGAACGAGGGTCAGCCCCAGTGCTaGGGAGTTTGTGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: RPGRHTPQKVHLVRAENEGQPQC*GVCGGE
Trigger: CTCCCCACCACAAACTCCCCAGCACTGGGGCTGACC...CTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTGGCGGCCGGGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CCA 90 bp GCCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCTGGAGGTTTGGCAAATaGGTCAAAGGTCGAGGCACC +
Preference number: 4 (lower is better)
Translates to: AGDPRCGRDPAATPRKKSWRFGK*VKGRGT
Trigger: GGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCA...GGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CCA 90 bp GTGGTCCGCGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCTGGATTCTGGAGGTTTaGCAAATGGGTCAAAGGTCG +
Preference number: 4 (lower is better)
Translates to: VVRVQLPEPPRDTSRHWLWILEV*QMGQRS
Trigger: CGACCTTTGACCCATTTGCCAAACCTCCAGAATCCA...GAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACGCGGACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CCA 90 bp GGAGGAGAGCATGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCGCTCCAGCCCCTCCTTaGTCTCTGTGGATTCTGGAG +
Preference number: 4 (lower is better)
Translates to: GGEHGSQIPGLASGQDGSAPAPP*SLWILE
Trigger: CTCCAGAATCCACAGAGACCAAGGAGGGGCTGGAGC...GGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCATGCTCTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GGAGGAGAGCATGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCGCTTGGAACTGGGGCTaGGGTCTCCAAACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: GGEHGSQIPGLASGQDGSAWNWG*GLQTGP
Trigger: TGGACCTGTTTGGAGACCCCAGCCCCAGTTCCAAGC...GGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCATGCTCTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CCCAGGAAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTGCTTGGCTGGGTTGCTTGGAACTGGGGCTaGGGTCTCCAAACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: PRKDSGVRQARASLLGWVAWNWG*GLQTGP
Trigger: TGGACCTGTTTGGAGACCCCAGCCCCAGTTCCAAGC...AACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTTCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GGACCACGGCCCCTGCACCATTGGCCATGGGGGAGCCATCACCCTGCCAGGACCCATTTTGCTTGGAACTaGGGCTGGGGTCTCCAAACA +
Preference number: 4 (lower is better)
Translates to: GPRPLHHWPWGSHHPARTHFAWN*GWGLQT
Trigger: TGTTTGGAGACCCCAGCCCCAGTTCCAAGCAAAATG...GGTCCTGGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGTGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CCA 90 bp GGAGGAGAGCATGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCCGGGTCTTTGCAACCTaGGGTGCCTTGACCAACGAG +
Preference number: 4 (lower is better)
Translates to: GGEHGSQIPGLASGQDGSRVFAT*GALTNE
Trigger: CTCGTTGGTCAAGGCACCCCAGGTTGCAAAGACCCG...GGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCATGCTCTCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGGGAGGCTCCCCAAGCGGGTCTTTGCAACCTaGGGTGCCTTGACCAACGAG +
Preference number: 4 (lower is better)
Translates to: QRSRHHQVCRRSPGRLPKRVFAT*GALTNE
Trigger: CTCGTTGGTCAAGGCACCCCAGGTTGCAAAGACCCG...CTTGGGGAGCCTCCCTGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp ACCTCAGGAAGGGGAGTGGCATTGTGCCTCTCCACTCACCGACTCTGGTGGAAGGAGCCGGTGCGCATCTaGTTTAGCGTCGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: TSGRGVALCLSTHRLWWKEPVRI*FSVGLP
Trigger: GGGCAGGCCGACGCTAAACCAGATGCGCACCGGCTC...CTTCCACCAGAGTCGGTGAGTGGAGAGGCACAATGCCACTCCCCTTCCTGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp TCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGAGGCGCTGTAGGTCATaGAGCCCAGGGGCGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SPSMPRSRASGSFVPFCLRRCRS*SPGAPP
Trigger: TGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCCT...CAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CCTGTGTGGCTAAGACTGAGTTTCTCGCTAGCCTTGGCGAAGCAAGGGAGAGGGCTAGCTCCCGGGCCGTaGTCCGCGTCCAGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PVWLRLSFSLALAKQGRGLAPGP*SASSFQ
Trigger: CTGGAAGCTGGACGCGGACCACGGCCCGGGAGCTAG...CCCTCTCCCTTGCTTCGCCAAGGCTAGCGAGAAACTCAGTCTTAGCCACACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp GTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCGGCGTTCCACCGATTCCTCCTGTGTaGCTAAGACTGAGTTTCTCG +
Preference number: 4 (lower is better)
Translates to: VQLPEPPRDTSRHWLGVPPIPPV*LRLSFS
Trigger: CGAGAAACTCAGTCTTAGCCACACAGGAGGAATCGG...TGGAACGCCGAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR TCA 90 bp CCCGGCCGCCACACCCCGCAAAAAGTCCACTTGGTGAGAGCTGAGAACGAGGGTTGGCCTCGCGCACCTTaGTTTCTGCCTCGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: PGRHTPQKVHLVRAENEGWPRAP*FLPRSS
Trigger: ACTACTCCGAGGCAGAAATCAAGGTGCGCGAGGCCA...ACCCTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTGGCGGCCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268933.8
ENST00000537145.2
CDS-3UTR TCA 90 bp TTGCTTGGAACTGGGGCTGGGGTCTCCAAACAGGTCCAGCTCCACAGGGCTGCTGCTCGGAGCCCGTCTTaGGCAGGTAGTCCAGCAATG +
Preference number: 4 (lower is better)
Translates to: LLGTGAGVSKQVQLHRAAARSPS*AGSPAM
Trigger: CATTGCTGGACTACCTGCTCAAGACGGGCTCCGAGC...AGCAGCCCTGTGGAGCTGGACCTGTTTGGAGACCCCAGCCCCAGTTCCAAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp TTGGCTGGGTTAGTGCTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTGCCGCTCCTCATCCTTaGGCAGGGCCATCACCTGCT +
Preference number: 4 (lower is better)
Translates to: LAGLVLPLVCPGPGHLAPAAPHP*AGPSPA
Trigger: AGCAGGTGATGGCCCTGCTCAAGGATGAGGAGCGGC...AGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAGCACTAACCCAGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp TTCGGGACAGGACGGTTCCTGAGGGGATCGGAGACCAGGGGTCTGCAGAAGGCCGGAGGTATAGCGGGGTaGCGAAGAGGAGGAGTTGTA +
Preference number: 4 (lower is better)
Translates to: FGTGRFLRGSETRGLQKAGGIAG*RRGGVV
Trigger: TACAACTCCTCCTCTTCGTCACCCCGCTATACCTCC...GGCCTTCTGCAGACCCCTGGTCTCCGATCCCCTCAGGAACCGTCCTGTCCCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp GATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGGCTCTCTGTCCCGCTaGTGGTGGACCACGGCCCCT +
Preference number: 4 (lower is better)
Translates to: DSGGLANGSKVEAPPGVSGSLSR*WWTTAP
Trigger: AGGGGCCGTGGTCCACCATCAGCGGGACAGAGAGCC...CGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp GTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGTCGAGACCCGGGACCAAGGAGGAAGCTaGGGGACCCAGGAAGGACTC +
Preference number: 4 (lower is better)
Translates to: VQLQFPKQPVIHAVVETRDQGGS*GTQEGL
Trigger: GAGTCCTTCCTGGGTCCCTCAGCTTCCTCCTTGGTC...CCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR TCA 90 bp AGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGGAACTGGGGCTGGGGGACCAAGGAGGAAGCTaGGGGACCCAGGAAGGACTC +
Preference number: 4 (lower is better)
Translates to: RSRASGSFVPFCLELGLGDQGGS*GTQEGL
Trigger: GAGTCCTTCCTGGGTCCCTCAGCTTCCTCCTTGGTC...CCCCAGCCCCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp CACACCCCGCAAAAAGTCCACTTGGTGAGAGCTGAGAACGAGGGTTCCAGTCTTCAGCTGGCACGCTGCTaGGCGGGAGGGGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: HTPQKVHLVRAENEGSSLQLARC*AGGAER
Trigger: CCTCTCTGCCCCTCCCGCTCAGCAGCGTGCCAGCTG...AAGACTGGAACCCTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR TCA 90 bp GGAGGAGAGCATGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCTTCCTAAACAGCCGGTaGTCCACGCTGTGGTCGAGA +
Preference number: 4 (lower is better)
Translates to: GGEHGSQIPGLASGQDGSFLNSR*STLWSR
Trigger: TCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAA...GGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCATGCTCTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512379.5
ENST00000537145.2
CDS-3UTR GCA 90 bp ACCTCAGGAAGGGGAGTGGCATTGTGCCTCTCCACTCACCGACTCTGGTGGAAGGCAGCTCTTCCCGCGTaGGTTTGCCTCCTAGCCAGC +
Preference number: 4 (lower is better)
Translates to: TSGRGVALCLSTHRLWWKAALPA*VCLLAS
Trigger: GCTGGCTAGGAGGCAAACGCACGCGGGAAGAGCTGC...CTTCCACCAGAGTCGGTGAGTGGAGAGGCACAATGCCACTCCCCTTCCTGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR GCA 90 bp GGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGGGAGGCTCCCCGCGCACCTTGATTTCTaGCTCGGAGTAGTTGTGCAC +
Preference number: 4 (lower is better)
Translates to: GQRSRHHQVCRRSPGRLPAHLDF*LGVVVH
Trigger: GTGCACAACTACTCCGAGGCAGAAATCAAGGTGCGC...GGGGAGCCTCCCTGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp GGCCCCCAGGAGGATCCACTGGCCTCTGTGTTCGGCCTAAAACCTGGCTGGTTTAGCAGGGCCATCACCTaGTTGACCTTCTCGCGCACG +
Preference number: 4 (lower is better)
Translates to: GPQEDPLASVFGLKPGWFSRAIT*LTFSRT
Trigger: CGTGCGCGAGAAGGTCAAGCAGGTGATGGCCCTGCT...AAACCAGCCAGGTTTTAGGCCGAACACAGAGGCCAGTGGATCCTCCTGGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512291.5
CDS-3UTR GCA 90 bp AGACCCGGCCGCCACACCCCGCAAAAAGTCCACTTGGTGAGAGCTGAGAACGAGGCCGATGCCCTCCAGTaGCATGCGCTCCTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: RPGRHTPQKVHLVRAENEADALQ*HALLGL
Trigger: AAGACCAAGGAGCGCATGGCACTGGAGGGCATCGGC...CTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTGGCGGCCGGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR GCA 90 bp AAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTGCTTGGCTGGGTTAGTGCTGCCGATGCCCTCCAGTaGCATGCGCTCCTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: KDSGVRQARASLLGWVSAADALQ*HALLGL
Trigger: AAGACCAAGGAGCGCATGGCACTGGAGGGCATCGGC...AGCACTAACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp AAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTGCTTGGCTGGGTTAGTGCTCACTGCCAATGCCGATaGCCTCCAGTGCCATGCGCT +
Preference number: 4 (lower is better)
Translates to: KDSGVRQARASLLGWVSAHCQCR*PPVPCA
Trigger: AGCGCATGGCACTGGAGGGCATCGGCATTGGCAGTG...AGCACTAACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp AGGCCCCCAGGAGGATCCACTGGCCTCTGTGTTCGGCCTAAAACCTGGCTGGTTATGGCGAGGGCCAGCTaGAGCTGCAGTTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RPPGGSTGLCVRPKTWLVMARAS*SCSSSS
Trigger: GGAAGAGGAACTGCAGCTGCAGCTGGCCCTCGCCAT...AACCAGCCAGGTTTTAGGCCGAACACAGAGGCCAGTGGATCCTCCTGGGGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512291.5
CDS-3UTR GCA 90 bp CCTGCTCCAGGTCGGAGGTATAGCGGGGTGACGAAGAGGAGGAGTTGTAGGAGGATGGCGAGGGCCAGCTaGAGCTGCAGTTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: PAPGRRYSGVTKRRSCRRMARAS*SCSSSS
Trigger: GGAAGAGGAACTGCAGCTGCAGCTGGCCCTCGCCAT...CCTCCTACAACTCCTCCTCTTCGTCACCCCGCTATACCTCCGACCTGGAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
CDS-3UTR GCA 90 bp GGGTTAGTGCTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCATGGCGAGGGCCAGCTaGAGCTGCAGTTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GLVLPLVCPGPGHLAPSCMARAS*SCSSSS
Trigger: GGAAGAGGAACTGCAGCTGCAGCTGGCCCTCGCCAT...GCACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAGCACTAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp TCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGTCCTTCTCGTGCTCCTaGCGGCTCAGGCGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SGGLANGSKVEAPPGVSESFSCS*RLRRRA
Trigger: GGCTCTGCGCCTGAGCCGGCAGGAGCACGAGAAGGA...CTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp ACTTGGCTTCTGCCACAGCCGCATCACGTGCCCCTGGCTTGTCTACCCTGCTGCGTGCTTCCCCTAGTATaGCCAGGTCCAGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: TWLLPQPHHVPLACLPCCVLPLV*PGPGHL
Trigger: CAGATGCCCTGGACCTGGGCATACTAGGGGAAGCAC...GCAGCAGGGTAGACAAGCCAGGGGCACGTGATGCGGCTGTGGCAGAAGCCAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR GCA 90 bp TGCGGGCGTTCAGTTTCTAGCTCCCGGGCCGTGGTCCGCGTCCAGCTTCCAGAGAAGCTCGGGCCTCTTTaGTTGGCTGGGTTAGTGCTT +
Preference number: 4 (lower is better)
Translates to: CGRSVSSSRAVVRVQLPEKLGPL*LAGLVL
Trigger: AAGCACTAACCCAGCCAAGCAAAGAGGCCCGAGCTT...CTCTGGAAGCTGGACGCGGACCACGGCCCGGGAGCTAGAAACTGAACGCCCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR GCA 90 bp CCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCAAAGCTCGGGCCTCTTTaGTTGGCTGGGTTAGTGCTT +
Preference number: 4 (lower is better)
Translates to: PVIHAVVETRPPHPAKSPKLGPL*LAGLVL
Trigger: AAGCACTAACCCAGCCAAGCAAAGAGGCCCGAGCTT...TGGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR GCA 90 bp CCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCACTTTGCAACCTGGGGTaGCTTGACCAACGAGTCAAG +
Preference number: 4 (lower is better)
Translates to: PVIHAVVETRPPHPAKSPLCNLG*LDQRVK
Trigger: CTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAAG...TGGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR GCA 90 bp CCTGCTCCAGGTCGGAGGTATAGCGGGGTGACGAAGAGGAGGAGTTGTAGGAGGGGGGTTCCGGGTCTTTaGAACCTGGGGTGCCTTGAC +
Preference number: 4 (lower is better)
Translates to: PAPGRRYSGVTKRRSCRRGVPGL*NLGCLD
Trigger: GTCAAGGCACCCCAGGTTGCAAAGACCCGGAACCCC...CCTCCTACAACTCCTCCTCTTCGTCACCCCGCTATACCTCCGACCTGGAGCAGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
CDS-3UTR GCA 90 bp CCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAAGAGGAAGGGGTTGGTaGCGGTCTGCGGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PLLGLCGFWRFGKWVKGRRGRGW*RSAGAG
Trigger: CCCCGCCCCCGCAGACCGGCACCAACCCCTTCCTCT...TCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
CDS-3UTR GCA 90 bp GTGGTCCGCGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCTTAGCCCAACCCCAGTaGCCATGTGTGATAAATGAA +
Preference number: 4 (lower is better)
Translates to: VVRVQLPEPPRDTSRHWLLAQPQ*PCVINE
Trigger: TTCATTTATCACACATGGGCACTGGGGTTGGGCTAA...GAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACGCGGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR GCA 90 bp AGACCCGGCCGCCACACCCCGCAAAAAGTCCACTTGGTGAGAGCTGAGAACGAGCTGGCTTGTCTACCCTaGTGCGCTCGAGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: RPGRHTPQKVHLVRAENELACLP*CARAPG
Trigger: TCCAGGAGCTCGAGCGCAGCAGGGTAGACAAGCCAG...CTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTGGCGGCCGGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR GCA 90 bp GTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCGGCGTTCCACATCCTGTTTGTAACTaGATTGTGGGACTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: VQLPEPPRDTSRHWLGVPHPVCN*IVGLPS
Trigger: GGAAGGGAGTCCCACAATGCAGTTACAAACAGGATG...TGGAACGCCGAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR GCA 90 bp GATGGTGGACCACGGCCCCTGCACCATTGGCCATGGGGGAGCCATCACCCTGCCAGGCCACTTGATTTCTaGCTCGGAGTAGTTGTGCAC +
Preference number: 4 (lower is better)
Translates to: DGGPRPLHHWPWGSHHPARPLDF*LGVVVH
Trigger: GTGCACAACTACTCCGAGGCAGAAATCAAGTGGCCT...GGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGTGGTCCACCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CCA 90 bp AGTCTTTATTATGCGGGCGTTCAGTTTCTAGCTCCCGGGCCGTGGTCCGCGTCCGCAGGGTCCCTGGAATaGGTAGCAGCTCTTCCCGCG +
Preference number: 4 (lower is better)
Translates to: SLYYAGVQFLAPGPWSASAGSLE*VAALPA
Trigger: CGCGGGAAGAGCTGCTACCCATTCCAGGGACCCTGC...GGACGCGGACCACGGCCCGGGAGCTAGAAACTGAACGCCCGCATAATAAAGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CCA 90 bp TCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTCTGGAGACTTGGAGGTaGGTGGCCCTCGCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: SVDSGGLANGSKVEAPPGLETWR*VALAPA
Trigger: GGCGGGGGCGAGGGCCACCCACCTCCAAGTCTCCAG...ACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp AAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTGCTTGGCTGGGTTAGTGCTGTGCGGAGGTCGTCATaGCTGGAGACTTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: KDSGVRQARASLLGWVSAVRRSS*LETWRW
Trigger: CCACCTCCAAGTCTCCAGCCATGACGACCTCCGCAC...AGCACTAACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp AGGCCCCCAGGAGGATCCACTGGCCTCTGTGTTCGGCCTAAAACCTGGCTGGTTACGATGTTCTTCACCTaGCGCCGGAGTGCGGAGGTC +
Preference number: 4 (lower is better)
Translates to: RPPGGSTGLCVRPKTWLVTMFFT*RRSAEV
Trigger: GACCTCCGCACTCCGGCGCCAGGTGAAGAACATCGT...AACCAGCCAGGTTTTAGGCCGAACACAGAGGCCAGTGGATCCTCCTGGGGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512291.5
CDS-3UTR CCA 90 bp GGCCCCCAGGAGGATCCACTGGCCTCTGTGTTCGGCCTAAAACCTGGCTGGTTTACGATGTTCTTCACCTaGCGCCGGAGTGCGGAGGTC +
Preference number: 4 (lower is better)
Translates to: GPQEDPLASVFGLKPGWFTMFFT*RRSAEV
Trigger: GACCTCCGCACTCCGGCGCCAGGTGAAGAACATCGT...AAACCAGCCAGGTTTTAGGCCGAACACAGAGGCCAGTGGATCCTCCTGGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512291.5
CDS-3UTR CCA 90 bp AGGAGCCTGGGAGCTCCTGCACTTGGCTTCTGCCACAGCCGCATCACGTGCCCCTCGCGGTCGATGTACTaGAAGTCCTTGAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: RSLGAPALGFCHSRITCPSRSMY*KSLSVW
Trigger: CCAGACACTCAAGGACTTCCAGTACATCGACCGCGA...GGGGCACGTGATGCGGCTGTGGCAGAAGCCAAGTGCAGGAGCTCCCAGGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp AGGCCCCCAGGAGGATCCACTGGCCTCTGTGTTCGGCCTAAAACCTGGCTGGTTGTCAGATCCCAGGGCTaGCTTCGGGACAGGACGGTT +
Preference number: 4 (lower is better)
Translates to: RPPGGSTGLCVRPKTWLVVRSQG*LRDRTV
Trigger: AACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGAC...AACCAGCCAGGTTTTAGGCCGAACACAGAGGCCAGTGGATCCTCCTGGGGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512291.5
CDS-3UTR CCA 90 bp AGGAAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTGCTTGGCTGGGTTAGTGTCAGATCCCAGGGCTaGCTTCGGGACAGGACGGTT +
Preference number: 4 (lower is better)
Translates to: RKDSGVRQARASLLGWVSVRSQG*LRDRTV
Trigger: AACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGAC...ACTAACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCCCCAGGGGTCTGTGGTaGGGGGCCCAGCAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LGLCGFWRFGKWVKGRGTPRGLW*GAQQAA
Trigger: TGCTGCCTGCTGGGCCCCCCACCACAGACCCCTGGG...GGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp AAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTGCTTGGCTGGGTTAGTGCTGTGCTGGGGAGTTTGTaGTGGGGAGAGTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: KDSGVRQARASLLGWVSAVLGSL*WGEFRA
Trigger: GGCCCTGAACTCTCCCCACCACAAACTCCCCAGCAC...AGCACTAACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCGGTCAGCCCCAGTGCTaGGGAGTTTGTGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: GLANGSKVEAPPGVSEVSGQPQC*GVCGGE
Trigger: CTCCCCACCACAAACTCCCCAGCACTGGGGCTGACC...GGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp TGCGGGCGTTCAGTTTCTAGCTCCCGGGCCGTGGTCCGCGTCCAGCTTCCAGAGTGGAGGTTTGGCAAATaGGTCAAAGGTCGAGGCACC +
Preference number: 4 (lower is better)
Translates to: CGRSVSSSRAVVRVQLPEWRFGK*VKGRGT
Trigger: GGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCA...CTCTGGAAGCTGGACGCGGACCACGGCCCGGGAGCTAGAAACTGAACGCCCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CCA 90 bp CTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTGTCAGGAATGGATTCTGGAGGTTTaGCAAATGGGTCAAAGGTCG +
Preference number: 4 (lower is better)
Translates to: LARAERVGGGRSAETCQEWILEV*QMGQRS
Trigger: CGACCTTTGACCCATTTGCCAAACCTCCAGAATCCA...TTCCTGACAGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp ACCCCCACCTCAGGAAGGGGAGTGGCATTGTGCCTCTCCACTCACCGACTCTGGGCTCCAGCCCCTCCTTaGTCTCTGTGGATTCTGGAG +
Preference number: 4 (lower is better)
Translates to: TPTSGRGVALCLSTHRLWAPAPP*SLWILE
Trigger: CTCCAGAATCCACAGAGACCAAGGAGGGGCTGGAGC...CCAGAGTCGGTGAGTGGAGAGGCACAATGCCACTCCCCTTCCTGAGGTGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp GGGTTAGTGCTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCGATACCAGCCGCCACTaGCTCGGCGTTCCACTAGCA +
Preference number: 4 (lower is better)
Translates to: GLVLPLVCPGPGHLAPSCDTSRH*LGVPLA
Trigger: TGCTAGTGGAACGCCGAGCCAGTGGCGGCTGGTATC...GCACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAGCACTAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CCA 90 bp GTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGTCGAGACCCGGCTGCGCTCGAGCTCCTaGAGGTTGGATCCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: VQLQFPKQPVIHAVVETRLRSSS*RLDPSK
Trigger: CTTGGAGGGATCCAACCTCCAGGAGCTCGAGCGCAG...CCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp ACCCCCACCTCAGGAAGGGGAGTGGCATTGTGCCTCTCCACTCACCGACTCTGGCATAGGGGCCCCTCCTaGATTGAGTACCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: TPTSGRGVALCLSTHRLWHRGPS*IEYQAS
Trigger: TGAGGCCTGGTACTCAATCCAGGAGGGGCCCCTATG...CCAGAGTCGGTGAGTGGAGAGGCACAATGCCACTCCCCTTCCTGAGGTGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp ACTTGGCTTCTGCCACAGCCGCATCACGTGCCCCTGGCTTGTCTACCCTGCTGCCCTCAGGAAGGGGAGTaGCATTGTGCCTCTCCACTC +
Preference number: 4 (lower is better)
Translates to: TWLLPQPHHVPLACLPCCPQEGE*HCASPL
Trigger: GAGTGGAGAGGCACAATGCCACTCCCCTTCCTGAGG...GCAGCAGGGTAGACAAGCCAGGGGCACGTGATGCGGCTGTGGCAGAAGCCAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp AGAGCATGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCTGAGGCAGCCAAGTCCAGGATaGAGGACTGTGGAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RAWESDPRAGFGTGRFLRQPSPG*RTVEGR
Trigger: TCTCCCCTCCACAGTCCTCCATCCTGGACTTGGCTG...CCTCAGGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCATGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537145.2
ENST00000574464.5
3UTR CAA 72 bp GCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTaGCTTGGAACTGGGGCTGGGGTCTCCAAACAGGTC +
Preference number: 4 (lower is better)
Translates to: AQVQGIWLLRAI*LGTGAGVSKQV
Trigger: GACCTGTTTGGAGACCCCAGCCCCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp TATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGGAACTGGGGCCGCTCCTCATCCTTaGGCAGGGCCATCACCTGCT +
Preference number: 4 (lower is better)
Translates to: YAQVQGIWLLRAILLGTGAAPHP*AGPSPA
Trigger: AGCAGGTGATGGCCCTGCTCAAGGATGAGGAGCGGC...CCCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp CTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCGGCTCTCTGTCCCGCTaGTGGTGGACCACGGCCCCT +
Preference number: 4 (lower is better)
Translates to: LGLCGFWRFGKWVKGRGTGSLSR*WWTTAP
Trigger: AGGGGCCGTGGTCCACCATCAGCGGGACAGAGAGCC...GGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp ACCCCCACCTCAGGAAGGGGAGTGGCATTGTGCCTCTCCACTCACCGACTCTGGCCAACGAGTCAAGGTTaGCCAAGGAGGAAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: TPTSGRGVALCLSTHRLWPTSQG*PRRKLR
Trigger: CCTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGG...CCAGAGTCGGTGAGTGGAGAGGCACAATGCCACTCCCCTTCCTGAGGTGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR TCA 90 bp AGAGCATGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCTGAGGCCACTTGGTGAGAGCTaGGAACGAGGGTTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: RAWESDPRAGFGTGRFLRPLGES*ERGFQS
Trigger: AGACTGGAACCCTCGTTCTCAGCTCTCACCAAGTGG...CCTCAGGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCATGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512379.5
ENST00000537145.2
CDS-3UTR TCA 90 bp AACGAGGGTTCCAGTCTTTATTATGCGGGCGTTCAGTTTCTAGCTCCCGGGCCGGGGCCCCTCCTGGATTaGGTACCAGGCCTCACCCCA +
Preference number: 4 (lower is better)
Translates to: NEGSSLYYAGVQFLAPGPGPLLD*VPGLTP
Trigger: TGGGGTGAGGCCTGGTACTCAATCCAGGAGGGGCCC...CGGCCCGGGAGCTAGAAACTGAACGCCCGCATAATAAAGACTGGAACCCTCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR GCA 90 bp CTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCGCGTGGGTTCGCTCCTaGCGCAGCCGCTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: LGLCGFWRFGKWVKGRGTAWVRS*RSRSSS
Trigger: GGATGAGGAGCGGCTGCGGCAGGAGCGAACCCACGC...GGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp GGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCGCCGATGCCCTCCAGTaGCATGCGCTCCTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: GLANGSKVEAPPGVSEVSADALQ*HALLGL
Trigger: AAGACCAAGGAGCGCATGGCACTGGAGGGCATCGGC...GGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp CAGGAGGATCCACTGGCCTCTGTGTTCGGCCTAAAACCTGGGATGTCCCATGGGCACTGCCAATGCCGATaGCCTCCAGTGCCATGCGCT +
Preference number: 4 (lower is better)
Translates to: QEDPLASVFGLKPGMSHGHCQCR*PPVPCA
Trigger: AGCGCATGGCACTGGAGGGCATCGGCATTGGCAGTG...CCCATGGGACATCCCAGGTTTTAGGCCGAACACAGAGGCCAGTGGATCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp CCCCCAGGAGGATCCACTGGCCTCTGTGTTCGGCCTAAAACCTGGCTGGTTTTTGCTGCCCACTGCCAATaGCGATGCCCTCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: PPGGSTGLCVRPKTWLVFAAHCQ*RCPPVP
Trigger: TGGCACTGGAGGGCATCGGCATTGGCAGTGGGCAGC...AAAAACCAGCCAGGTTTTAGGCCGAACACAGAGGCCAGTGGATCCTCCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512291.5
CDS-3UTR GCA 90 bp TTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGGCTGCCCACTGCCAATaGCGATGCCCTCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: FGKWVKGRGTTRCVGGLQAAHCQ*RCPPVP
Trigger: TGGCACTGGAGGGCATCGGCATTGGCAGTGGGCAGC...CTGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp CTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTAGCCCAGCTGCCCACTaGCAATGCCGATGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LPLVCPGPGHLAPSCHFASPAAH*QCRCPP
Trigger: TGGAGGGCATCGGCATTGGCAGTGGGCAGCTGGGCT...AGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp GTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGGGGACAGGCTTCTCTaGCTCCTCACGGCTCATGGC +
Preference number: 4 (lower is better)
Translates to: VWQMGQRSRHHQVCRRSPGDRLL*LLTAHG
Trigger: GCCATGAGCCGTGAGGAGGCAGAGAAGCCTGTCCCC...TGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp TATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGGAACTGGGGGGGACAGGCTTCTCTaGCTCCTCACGGCTCATGGC +
Preference number: 4 (lower is better)
Translates to: YAQVQGIWLLRAILLGTGGDRLL*LLTAHG
Trigger: GCCATGAGCCGTGAGGAGGCAGAGAAGCCTGTCCCC...CCCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCATA
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp CTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTGGGGAGCCATCACCCTaGCAGGACCTCACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LPLVCPGPGHLAPSCHFAGEPSP*QDLTSF
Trigger: GAAGGAGGTGAGGTCCTGGCAGGGTGATGGCTCCCC...AGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp GATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGCCAGCTCCACAGGGCTaGTGGGCTTCCCAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: DSGGLANGSKVEAPPGVSPAPQG*WASQRA
Trigger: TGCCCTCTGGGAAGCCCAGCAGCCCTGTGGAGCTGG...CGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp CTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCATCCTTCGTGCCATTTTaGTTGGAACTGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LQFPKQPVIHAVVETRPPSFVPF*LELGLG
Trigger: CCCCAGCCCCAGTTCCAAGCAAAATGGCACGAAGGA...TGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR GCA 90 bp CTCTCTGTCCCGCTGATGGTGGACCACGGCCCCTGCACCATTGGCCATGGGGGACATCTGGCTCCTTCGTaGCATTTTGCTTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: LSVPLMVDHGPCTIGHGGHLAPS*HFAWNW
Trigger: CCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATG...TCCCCCATGGCCAATGGTGCAGGGGCCGTGGTCCACCATCAGCGGGACAGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
CDS-3UTR GCA 90 bp AGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGGAACTGGGGCTGGGGGTGCTTCCCCTAGTATaGCCAGGTCCAGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: RSRASGSFVPFCLELGLGVLPLV*PGPGHL
Trigger: CAGATGCCCTGGACCTGGGCATACTAGGGGAAGCAC...CCCCAGCCCCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp CTTGGCTGGGTTAGTGCTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCGTGCTTCCCCTAGTATaGCCAGGTCCAGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: LGWVSASPSMPRSRASGSVLPLV*PGPGHL
Trigger: CAGATGCCCTGGACCTGGGCATACTAGGGGAAGCAC...GGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAGCACTAACCCAGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp TGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCTGAGGGGATCGAAGCTCGGGCCTCTTTaGTTGGCTGGGTTAGTGCTT +
Preference number: 4 (lower is better)
Translates to: WESDPRAGFGTGRFLRGSKLGPL*LAGLVL
Trigger: AAGCACTAACCCAGCCAAGCAAAGAGGCCCGAGCTT...CGATCCCCTCAGGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp CCCAGGAAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTGCTTGGCTGGGTTAAGCTCGGGCCTCTTTaGTTGGCTGGGTTAGTGCTT +
Preference number: 4 (lower is better)
Translates to: PRKDSGVRQARASLLGWVKLGPL*LAGLVL
Trigger: AAGCACTAACCCAGCCAAGCAAAGAGGCCCGAGCTT...AACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTTCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp GCATGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCTGAGGGGACTTTGCAACCTGGGGTaGCTTGACCAACGAGTCAAG +
Preference number: 4 (lower is better)
Translates to: AWESDPRAGFGTGRFLRGLCNLG*LDQRVK
Trigger: CTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAAG...TCCCCTCAGGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp CTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCACCCACGTTGTGCAGCTaGAGTTTCCTAAACAGCCGG +
Preference number: 4 (lower is better)
Translates to: LQFPKQPVIHAVVETRPPPTLCS*SFLNSR
Trigger: CCGGCTGTTTAGGAAACTGCAGCTGCACAACGTGGG...TGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CCA 90 bp CTCCTTTCTCTCTTCTCTCTCAGGCTCTCTGTCCCGCTGATGGTGGACCACGGCCAGAGCCATCCACCATaGACCCTCGTCCCAGAGACC +
Preference number: 4 (lower is better)
Translates to: LLSLFSLRLSVPLMVDHGQSHPP*TLVPET
Trigger: GGTCTCTGGGACGAGGGTCCATGGTGGATGGCTCTG...GCCGTGGTCCACCATCAGCGGGACAGAGAGCCTGAGAGAGAAGAGAGAAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CCA 90 bp TCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGTCCTTGGGTTCCACATaGGGCTCCAGTGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SPSMPRSRASGSFVPFCLSLGST*GSSAGS
Trigger: GGAGCCCGCACTGGAGCCCCATGTGGAACCCAAGGA...CAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CCA 90 bp TCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGTCATGGCTGGAGACTTaGAGGTGGGTGGCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: SGGLANGSKVEAPPGVSESWLET*RWVALA
Trigger: GGCGAGGGCCACCCACCTCCAAGTCTCCAGCCATGA...CTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCGTGCGGAGGTCGTCATaGCTGGAGACTTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GLANGSKVEAPPGVSEVSVRRSS*LETWRW
Trigger: CCACCTCCAAGTCTCCAGCCATGACGACCTCCGCAC...GGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp AGTCTTTATTATGCGGGCGTTCAGTTTCTAGCTCCCGGGCCGTGGTCCGCGTCCACGATGTTCTTCACCTaGCGCCGGAGTGCGGAGGTC +
Preference number: 4 (lower is better)
Translates to: SLYYAGVQFLAPGPWSASTMFFT*RRSAEV
Trigger: GACCTCCGCACTCCGGCGCCAGGTGAAGAACATCGT...GGACGCGGACCACGGCCCGGGAGCTAGAAACTGAACGCCCGCATAATAAAGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CCA 90 bp CTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTCTGCACCATTGGCCATaGGGGAGCCATCACCCTGCC +
Preference number: 4 (lower is better)
Translates to: LPLVCPGPGHLAPSCHFALHHWP*GSHHPA
Trigger: GGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAG...AGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp TCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCCAGGGGTCTGTGGTaGGGGGCCCAGCAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SLVSVDSGGLANGSKVEAPRGLW*GAQQAA
Trigger: TGCTGCCTGCTGGGCCCCCCACCACAGACCCCTGGG...TGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCGTGCTGGGGAGTTTGTaGTGGGGAGAGTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GLANGSKVEAPPGVSEVSVLGSL*WGEFRA
Trigger: GGCCCTGAACTCTCCCCACCACAAACTCCCCAGCAC...GGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp TTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGGGTCAGCCCCAGTGCTaGGGAGTTTGTGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: FGKWVKGRGTTRCVGGLQGQPQC*GVCGGE
Trigger: CTCCCCACCACAAACTCCCCAGCACTGGGGCTGACC...CTGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GGGAAGACGCTAACCGAGGCGGGGAGGGTCAAGCCAGCTGGCACGCTGCTGAGCTGGATTCTGGAGGTTTaGCAAATGGGTCAAAGGTCG +
Preference number: 4 (lower is better)
Translates to: GKTLTEAGRVKPAGTLLSWILEV*QMGQRS
Trigger: CGACCTTTGACCCATTTGCCAAACCTCCAGAATCCA...GCTCAGCAGCGTGCCAGCTGGCTTGACCCTCCCCGCCTCGGTTAGCGTCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GCTGGCTTCGGGACAGGACGGTTCCTGAGGGGATCGGAGACCAGGGGTCTGCAGGGTCTCTGTGGATTCTaGAGGTTTGGCAAATGGGTC +
Preference number: 4 (lower is better)
Translates to: AGFGTGRFLRGSETRGLQGLCGF*RFGKWV
Trigger: GACCCATTTGCCAAACCTCCAGAATCCACAGAGACC...CTGCAGACCCCTGGTCTCCGATCCCCTCAGGAACCGTCCTGTCCCGAAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp AGGCCCCCAGGAGGATCCACTGGCCTCTGTGTTCGGCCTAAAACCTGGCTGGTTGCTCCAGCCCCTCCTTaGTCTCTGTGGATTCTGGAG +
Preference number: 4 (lower is better)
Translates to: RPPGGSTGLCVRPKTWLVAPAPP*SLWILE
Trigger: CTCCAGAATCCACAGAGACCAAGGAGGGGCTGGAGC...AACCAGCCAGGTTTTAGGCCGAACACAGAGGCCAGTGGATCCTCCTGGGGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512291.5
CDS-3UTR CCA 90 bp AAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTGCTTGGCTGGGTTAGTGCTGCTCCAGCCCCTCCTTaGTCTCTGTGGATTCTGGAG +
Preference number: 4 (lower is better)
Translates to: KDSGVRQARASLLGWVSAAPAPP*SLWILE
Trigger: CTCCAGAATCCACAGAGACCAAGGAGGGGCTGGAGC...AGCACTAACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GCATGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCTGAGGGGAGCCTCTTTGCTTGGCTaGGTTAGTGCTTCCCCTAGT +
Preference number: 4 (lower is better)
Translates to: AWESDPRAGFGTGRFLRGASLLG*VSASPS
Trigger: ACTAGGGGAAGCACTAACCCAGCCAAGCAAAGAGGC...TCCCCTCAGGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CCCAGGAAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTGCTTGGCTGGGTTGCCTCTTTGCTTGGCTaGGTTAGTGCTTCCCCTAGT +
Preference number: 4 (lower is better)
Translates to: PRKDSGVRQARASLLGWVASLLG*VSASPS
Trigger: ACTAGGGGAAGCACTAACCCAGCCAAGCAAAGAGGC...AACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp AGGAAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTGCTTGGCTGGGTTAGTCGGGTCTTTGCAACCTaGGGTGCCTTGACCAACGAG +
Preference number: 4 (lower is better)
Translates to: RKDSGVRQARASLLGWVSRVFAT*GALTNE
Trigger: CTCGTTGGTCAAGGCACCCCAGGTTGCAAAGACCCG...ACTAACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGACTAGCTCCCGGGCCGTaGTCCGCGTCCAGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PLLGLCGFWRFGKWVKGRLAPGP*SASSFQ
Trigger: CTGGAAGCTGGACGCGGACCACGGCCCGGGAGCTAG...TCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CCA 90 bp GGGAAGACGCTAACCGAGGCGGGGAGGGTCAAGCCAGCTGGCACGCTGCTGAGCGGCCTAAAACCTGGCTaGTTTTTAGCTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GKTLTEAGRVKPAGTLLSGLKPG*FLASPP
Trigger: AGGAGGAGAAGCTAAAAACCAGCCAGGTTTTAGGCC...GCTCAGCAGCGTGCCAGCTGGCTTGACCCTCCCCGCCTCGGTTAGCGTCTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510045.5
CDS-3UTR CCA 90 bp GGCCCCTGCACCATTGGCCATGGGGGAGCCATCACCCTGCCAGGACCTCACCTCGGCCTAAAACCTGGCTaGTTTTTAGCTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GPCTIGHGGAITLPGPHLGLKPG*FLASPP
Trigger: AGGAGGAGAAGCTAAAAACCAGCCAGGTTTTAGGCC...GAGGTGAGGTCCTGGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512291.5
CDS-3UTR CCA 90 bp GCTCCAGCCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAACAGGATGGAGGACTGTaGAGGGGAGAGGCAGCCGCG +
Preference number: 4 (lower is better)
Translates to: APAPPWSLWILEVWQMGQQDGGL*RGEAAA
Trigger: CGCGGCTGCCTCTCCCCTCCACAGTCCTCCATCCTG...TTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGGCTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp AGTCTTTATTATGCGGGCGTTCAGTTTCTAGCTCCCGGGCCGTGGTCCGCGTCCTGGCCTCGCGCACCTTaGTTTCTGCCTCGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: SLYYAGVQFLAPGPWSASWPRAP*FLPRSS
Trigger: ACTACTCCGAGGCAGAAATCAAGGTGCGCGAGGCCA...GGACGCGGACCACGGCCCGGGAGCTAGAAACTGAACGCCCGCATAATAAAGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000537145.2
CDS-3UTR TCA 90 bp AACGAGGGTTCCAGTCTTTATTATGCGGGCGTTCAGTTTCTAGCTCCCGGGCCGTGCGCTCCTTGGTCTTaGGGGCGTGGGTTCGCTCCT +
Preference number: 4 (lower is better)
Translates to: NEGSSLYYAGVQFLAPGPCAPWS*GRGFAP
Trigger: AGGAGCGAACCCACGCCCTCAAGACCAAGGAGCGCA...CGGCCCGGGAGCTAGAAACTGAACGCCCGCATAATAAAGACTGGAACCCTCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
CDS-3UTR TCA 90 bp CTTGGCTGGGTTAGTGCTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCGGAGGTATAGCGGGGTaGCGAAGAGGAGGAGTTGTA +
Preference number: 4 (lower is better)
Translates to: LGWVSASPSMPRSRASGSGGIAG*RRGGVV
Trigger: TACAACTCCTCCTCTTCGTCACCCCGCTATACCTCC...GGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAGCACTAACCCAGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp CTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTGACCAAGGAGGAAGCTaGGGGACCCAGGAAGGACTC +
Preference number: 4 (lower is better)
Translates to: LPLVCPGPGHLAPSCHFADQGGS*GTQEGL
Trigger: GAGTCCTTCCTGGGTCCCTCAGCTTCCTCCTTGGTC...AGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp AGCCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCTGGGGGACGGAGCGCTaGGACCTGTCAGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: SPSLVSVDSGGLANGSKVWGTER*DLSGRG
Trigger: ACCCCTTCCTGACAGGTCTCAGCGCTCCGTCCCCCA...GACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp GTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGTCGAGACCCGGTTCCTAAACAGCCGGTaGTCCACGCTGTGGTCGAGA +
Preference number: 4 (lower is better)
Translates to: VQLQFPKQPVIHAVVETRFLNSR*STLWSR
Trigger: TCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAA...CCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR TCA 90 bp CTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCAAATGACCGAATTGAGTaGCAGCCTGGCAGCATCTGG +
Preference number: 4 (lower is better)
Translates to: LQFPKQPVIHAVVETRPPNDRIE*QPGSIW
Trigger: CCAGATGCTGCCAGGCTGTCACTCAATTCGGTCATT...TGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR TCA 90 bp ACCTCAGGAAGGGGAGTGGCATTGTGCCTCTCCACTCACCGACTCTGGTGGAAGCCAGACCCCAAGCACTaGGGACACATCAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: TSGRGVALCLSTHRLWWKPDPKH*GHISVQ
Trigger: CTGGACACTGATGTGTCCTCAGTGCTTGGGGTCTGG...CTTCCACCAGAGTCGGTGAGTGGAGAGGCACAATGCCACTCCCCTTCCTGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR GCA 90 bp GTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCACTTGCGCACCTTGATTTCTaGCTCGGAGTAGTTGTGCAC +
Preference number: 4 (lower is better)
Translates to: VIHAVVETRPPHPAKSPLAHLDF*LGVVVH
Trigger: GTGCACAACTACTCCGAGGCAGAAATCAAGGTGCGC...AAGTGGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268933.8
ENST00000537145.2
CDS-3UTR GCA 90 bp TTTGCACCCCACGTTGTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTAGCCCAGCTGCCCACTaGCAATGCCGATGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: FAPHVVQLQFPKQPVIHASPAAH*QCRCPP
Trigger: TGGAGGGCATCGGCATTGGCAGTGGGCAGCTGGGCT...AGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCACAACGTGGGGTGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR GCA 90 bp CCCCCAGGAGGATCCACTGGCCTCTGTGTTCGGCCTAAAACCTGGCTGGTTTTTATGGCGAGGGCCAGCTaGAGCTGCAGTTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: PPGGSTGLCVRPKTWLVFMARAS*SCSSSS
Trigger: GGAAGAGGAACTGCAGCTGCAGCTGGCCCTCGCCAT...AAAAACCAGCCAGGTTTTAGGCCGAACACAGAGGCCAGTGGATCCTCCTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512291.5
CDS-3UTR GCA 90 bp CCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCGGAGACCAGGGGTCTaGAGAAGGCCCCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: PPWSLWILEVWQMGQRSRRRPGV*RRPPGG
Trigger: TCCTCCTGGGGGCCTTCTGCAGACCCCTGGTCTCCG...CCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp TCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGAAGGGTCAGCCCCAGTaGTGGGGAGTTTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: SGGLANGSKVEAPPGVSEKGQPQ*WGVCGG
Trigger: CCCACCACAAACTCCCCAGCACTGGGGCTGACCCTT...CTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp CTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTAAGGGTCAGCCCCAGTaGTGGGGAGTTTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LPLVCPGPGHLAPSCHFAKGQPQ*WGVCGG
Trigger: CCCACCACAAACTCCCCAGCACTGGGGCTGACCCTT...AGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp AGGCCCCCAGGAGGATCCACTGGCCTCTGTGTTCGGCCTAAAACCTGGCTGGTTTCCTTCGTGCCATTTTaGTTGGAACTGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RPPGGSTGLCVRPKTWLVSFVPF*LELGLG
Trigger: CCCCAGCCCCAGTTCCAAGCAAAATGGCACGAAGGA...AACCAGCCAGGTTTTAGGCCGAACACAGAGGCCAGTGGATCCTCCTGGGGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512291.5
CDS-3UTR GCA 90 bp CTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCAAAGCTCGGGCCTCTTTaGTTGGCTGGGTTAGTGCTT +
Preference number: 4 (lower is better)
Translates to: LQFPKQPVIHAVVETRPPKLGPL*LAGLVL
Trigger: AAGCACTAACCCAGCCAAGCAAAGAGGCCCGAGCTT...TGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR GCA 90 bp TATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGGAACTGGGGGGGTTCCGGGTCTTTaGAACCTGGGGTGCCTTGAC +
Preference number: 4 (lower is better)
Translates to: YAQVQGIWLLRAILLGTGGVPGL*NLGCLD
Trigger: GTCAAGGCACCCCAGGTTGCAAAGACCCGGAACCCC...CCCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCATA
59% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp TTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGGGGGTTCCGGGTCTTTaGAACCTGGGGTGCCTTGAC +
Preference number: 4 (lower is better)
Translates to: FGKWVKGRGTTRCVGGLQGVPGL*NLGCLD
Trigger: GTCAAGGCACCCCAGGTTGCAAAGACCCGGAACCCC...CTGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp AGTCTGACTCCTGAGCAGGTGTTCTTGTCCATCCTGTTTGTAACTGCATTGTGGGTGGGCAGCAGCGGCTaGGGTGCGAAGGCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: SLTPEQVFLSILFVTALWVGSSG*GAKAPA
Trigger: GGCCGGAGCCTTCGCACCGCAGCCGCTGCTGCCCAC...CCACAATGCAGTTACAAACAGGATGGACAAGAACACCTGCTCAGGAGTCAGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR GCA 90 bp GTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGTCGAGACCCGGCCCACGTTGTGCAGCTaGAGTTTCCTAAACAGCCGG +
Preference number: 4 (lower is better)
Translates to: VQLQFPKQPVIHAVVETRPTLCS*SFLNSR
Trigger: CCGGCTGTTTAGGAAACTGCAGCTGCACAACGTGGG...CCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CCA 90 bp ATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGGAACTGGGGGAGCAGCTGCATCCTTaGGTTCCACATGGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: MPRSRASGSFVPFCLELGEQLHP*VPHGAP
Trigger: TGGAGCCCCATGTGGAACCCAAGGATGCAGCTGCTC...CCCCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CCA 90 bp TTTGCACCCCACGTTGTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTCTGCACCATTGGCCATaGGGGAGCCATCACCCTGCC +
Preference number: 4 (lower is better)
Translates to: FAPHVVQLQFPKQPVIHALHHWP*GSHHPA
Trigger: GGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAG...AGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCACAACGTGGGGTGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CCA 90 bp CCAGGGCAGGTACGAAGATGTCAGCCAAGTCCAGGATGGAGGACTGGCTGGTTTGTGCTGGGGAGTTTGTaGTGGGGAGAGTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PGQVRRCQPSPGWRTGWFVLGSL*WGEFRA
Trigger: GGCCCTGAACTCTCCCCACCACAAACTCCCCAGCAC...AAACCAGCCAGTCCTCCATCCTGGACTTGGCTGACATCTTCGTACCTGCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512379.5
CDS-3UTR CCA 90 bp GTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGTGCTGGGGAGTTTGTaGTGGGGAGAGTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VWQMGQRSRHHQVCRRSPVLGSL*WGEFRA
Trigger: GGCCCTGAACTCTCCCCACCACAAACTCCCCAGCAC...TGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp AGCCGCTCCTCATCCTTGAGCAGGGCCATCACCTGCTTGACCTTCTCGCGCACGTGGAGGTTTGGCAAATaGGTCAAAGGTCGAGGCACC +
Preference number: 4 (lower is better)
Translates to: SRSSSLSRAITCLTFSRTWRFGK*VKGRGT
Trigger: GGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCA...CGTGCGCGAGAAGGTCAAGCAGGTGATGGCCCTGCTCAAGGATGAGGAGCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CCA 90 bp TTGGCTGGGTTAGTGCTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTGCTCCAGCCCCTCCTTaGTCTCTGTGGATTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LAGLVLPLVCPGPGHLAPAPAPP*SLWILE
Trigger: CTCCAGAATCCACAGAGACCAAGGAGGGGCTGGAGC...AGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAGCACTAACCCAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp TGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGGAAGCTGAGGGACCCGCTTGGAACTGGGGCTaGGGTCTCCAAACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: WGALTNESRLTKEEAEGPAWNWG*GLQTGP
Trigger: TGGACCTGTTTGGAGACCCCAGCCCCAGTTCCAAGC...GGGTCCCTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGTCGAGACCCGGCAGGTCCAGGGCATCTaGCTCCTTCGTGCCATTTTG +
Preference number: 4 (lower is better)
Translates to: VQLQFPKQPVIHAVVETRQVQGI*LLRAIL
Trigger: CAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTG...CCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CCA 90 bp GCCAGGGCAGGTACGAAGATGTCAGCCAAGTCCAGGATGGAGGACTGGCTGGTTCGGGTCTTTGCAACCTaGGGTGCCTTGACCAACGAG +
Preference number: 4 (lower is better)
Translates to: ARAGTKMSAKSRMEDWLVRVFAT*GALTNE
Trigger: CTCGTTGGTCAAGGCACCCCAGGTTGCAAAGACCCG...AACCAGCCAGTCCTCCATCCTGGACTTGGCTGACATCTTCGTACCTGCCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512379.5
CDS-3UTR CCA 90 bp GGGTCCGATTCCTCCTGTGTGGCTAAGACTGAGTTTCTCGCTAGCCTTGGCGAAGGAAGCGAAGGTGCCTaGGTGACGGGGGATGGAGGT +
Preference number: 4 (lower is better)
Translates to: GSDSSCVAKTEFLASLGEGSEGA*VTGDGG
Trigger: ACCTCCATCCCCCGTCACCCAGGCACCTTCGCTTCC...TTCGCCAAGGCTAGCGAGAAACTCAGTCTTAGCCACACAGGAGGAATCGGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp GCTGGCTTCGGGACAGGACGGTTCCTGAGGGGATCGGAGACCAGGGGTCTGCAGGTTCGGCCTAAAACCTaGCTGGTTTTTAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AGFGTGRFLRGSETRGLQVRPKT*LVFSFS
Trigger: GGAGAAGCTAAAAACCAGCCAGGTTTTAGGCCGAAC...CTGCAGACCCCTGGTCTCCGATCCCCTCAGGAACCGTCCTGTCCCGAAGCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512291.5
CDS-3UTR TCA 90 bp CTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCTGCGCTCCTTGGTCTTaGGGGCGTGGGTTCGCTCCT +
Preference number: 4 (lower is better)
Translates to: LGLCGFWRFGKWVKGRGTCAPWS*GRGFAP
Trigger: AGGAGCGAACCCACGCCCTCAAGACCAAGGAGCGCA...GGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp AGCATGCCATTCAACCTCTCTGAGCCACGGTTTCCTTGCCTGAAAAATGGGAGTGGCTCTCTGTCCCGCTaGTGGTGGACCACGGCCCCT +
Preference number: 4 (lower is better)
Translates to: SMPFNLSEPRFPCLKNGSGSLSR*WWTTAP
Trigger: AGGGGCCGTGGTCCACCATCAGCGGGACAGAGAGCC...ACTCCCATTTTTCAGGCAAGGAAACCGTGGCTCAGAGAGGTTGAATGGCATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR TCA 90 bp TTGGCTGGGTTAGTGCTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTCCAACGAGTCAAGGTTaGCCAAGGAGGAAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LAGLVLPLVCPGPGHLAPPTSQG*PRRKLR
Trigger: CCTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGG...AGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAGCACTAACCCAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp TGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGGAAGCTGAGGGACCCCCAACGAGTCAAGGTTaGCCAAGGAGGAAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: WGALTNESRLTKEEAEGPPTSQG*PRRKLR
Trigger: CCTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGG...GGGTCCCTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp TTTGCAACCTGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGGAAGCTAGCCCGAGTAGCCTCTaGGGTGACCCTCCGACCTGT +
Preference number: 4 (lower is better)
Translates to: FATWGALTNESRLTKEEASPSSL*GDPPTC
Trigger: ACAGGTCGGAGGGTCACCGCAGAGGCTACTCGGGCT...AGCTTCCTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
CDS-3UTR GCA 90 bp CACACCCCGCAAAAAGTCCACTTGGTGAGAGCTGAGAACGAGGGTTCCAGTCTTGCTGCCCACTGCCAATaGCGATGCCCTCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: HTPQKVHLVRAENEGSSLAAHCQ*RCPPVP
Trigger: TGGCACTGGAGGGCATCGGCATTGGCAGTGGGCAGC...AAGACTGGAACCCTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR GCA 90 bp CCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAAGCCCAGCTGCCCACTaGCAATGCCGATGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: PLLGLCGFWRFGKWVKGRSPAAH*QCRCPP
Trigger: TGGAGGGCATCGGCATTGGCAGTGGGCAGCTGGGCT...TCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp TTTGCACCCCACGTTGTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTATGGCGAGGGCCAGCTaGAGCTGCAGTTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: FAPHVVQLQFPKQPVIHAMARAS*SCSSSS
Trigger: GGAAGAGGAACTGCAGCTGCAGCTGGCCCTCGCCAT...AGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCACAACGTGGGGTGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR GCA 90 bp TCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACGGAGACCAGGGGTCTaGAGAAGGCCCCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: SLVSVDSGGLANGSKVEARRPGV*RRPPGG
Trigger: TCCTCCTGGGGGCCTTCTGCAGACCCCTGGTCTCCG...TGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp AGTCTTTATTATGCGGGCGTTCAGTTTCTAGCTCCCGGGCCGTGGTCCGCGTCCTCCTTCGTGCCATTTTaGTTGGAACTGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SLYYAGVQFLAPGPWSASSFVPF*LELGLG
Trigger: CCCCAGCCCCAGTTCCAAGCAAAATGGCACGAAGGA...GGACGCGGACCACGGCCCGGGAGCTAGAAACTGAACGCCCGCATAATAAAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
CDS-3UTR GCA 90 bp CCCGGCCGCCACACCCCGCAAAAAGTCCACTTGGTGAGAGCTGAGAACGAGGGTCATCTGGCTCCTTCGTaGCATTTTGCTTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: PGRHTPQKVHLVRAENEGHLAPS*HFAWNW
Trigger: CCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATG...ACCCTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTGGCGGCCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR GCA 90 bp GTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGTCGAGACCCGGCACTGCAGTGGGCTTTaGGCTTGGTTTCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: VQLQFPKQPVIHAVVETRHCSGL*AWFHAL
Trigger: CAGAGCATGAAACCAAGCGCAAAGCCCACTGCAGTG...CCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR GCA 90 bp AGACCCGGCCGCCACACCCCGCAAAAAGTCCACTTGGTGAGAGCTGAGAACGAGAAGGTGAGATACCTGTaGAATCGCACTGCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: RPGRHTPQKVHLVRAENEKVRYL*NRTAVG
Trigger: GCCCACTGCAGTGCGATTGCACAGGTATCTCACCTT...CTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTGGCGGCCGGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR GCA 90 bp CCTGTGTGGCTAAGACTGAGTTTCTCGCTAGCCTTGGCGAAGCAAGGGAGAGGGTCCAGCCCCGCCCCATaGCAGCTTTGTGACTTTGAG +
Preference number: 4 (lower is better)
Translates to: PVWLRLSFSLALAKQGRGSSPAP*QLCDFE
Trigger: CTCAAAGTCACAAAGCTGGCATGGGGCGGGGCTGGA...CCCTCTCCCTTGCTTCGCCAAGGCTAGCGAGAAACTCAGTCTTAGCCACACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp TCATCCTTGAGCAGGGCCATCACCTGCTTGACCTTCTCGCGCACGTTGACGCCCCACAGTCTTGAAGGATaGGCTGCCGTGTTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: SSLSRAITCLTFSRTLTPHSLEG*AAVLAE
Trigger: CTCTGCTAACACGGCAGCCCATCCTTCAAGACTGTG...GGGCGTCAACGTGCGCGAGAAGGTCAAGCAGGTGATGGCCCTGCTCAAGGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CCA 90 bp GCTCCAGCCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAGTGCGGAGGTCGTCATaGCTGGAGACTTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: APAPPWSLWILEVWQMGQVRRSS*LETWRW
Trigger: CCACCTCCAAGTCTCCAGCCATGACGACCTCCGCAC...TTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGGCTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGACTGCACCATTGGCCATaGGGGAGCCATCACCCTGCC +
Preference number: 4 (lower is better)
Translates to: PLLGLCGFWRFGKWVKGRLHHWP*GSHHPA
Trigger: GGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAG...TCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CCCGGCCGCCACACCCCGCAAAAAGTCCACTTGGTGAGAGCTGAGAACGAGGGTCAGCCAAGTCCAGGATaGAGGACTGGCTGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: PGRHTPQKVHLVRAENEGQPSPG*RTGWFL
Trigger: TAAAAACCAGCCAGTCCTCCATCCTGGACTTGGCTG...ACCCTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTGGCGGCCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268933.8
ENST00000512379.5
CDS-3UTR CCA 90 bp ACCTCAGGAAGGGGAGTGGCATTGTGCCTCTCCACTCACCGACTCTGGTGGAAGACCTGGGATGTCCCATaGGTCAGCAGAGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: TSGRGVALCLSTHRLWWKTWDVP*VSRAVC
Trigger: ACACACTGCTCTGCTGACCCATGGGACATCCCAGGT...CTTCCACCAGAGTCGGTGAGTGGAGAGGCACAATGCCACTCCCCTTCCTGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp TGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGGAAGCTGAGGGACCCACCTGGGATGTCCCATaGGTCAGCAGAGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: WGALTNESRLTKEEAEGPTWDVP*VSRAVC
Trigger: ACACACTGCTCTGCTGACCCATGGGACATCCCAGGT...GGGTCCCTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CTTGGCTGGGTTAGTGCTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTGGAGGTTTGGCAAATaGGTCAAAGGTCGAGGCACC +
Preference number: 4 (lower is better)
Translates to: LGWVSASPSMPRSRASGSWRFGK*VKGRGT
Trigger: GGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCA...GGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAGCACTAACCCAGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CCCGGCCGCCACACCCCGCAAAAAGTCCACTTGGTGAGAGCTGAGAACGAGGGTCATTTTGCTTGGAACTaGGGCTGGGGTCTCCAAACA +
Preference number: 4 (lower is better)
Translates to: PGRHTPQKVHLVRAENEGHFAWN*GWGLQT
Trigger: TGTTTGGAGACCCCAGCCCCAGTTCCAAGCAAAATG...ACCCTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTGGCGGCCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CCA 90 bp ACCTCAGGAAGGGGAGTGGCATTGTGCCTCTCCACTCACCGACTCTGGTGGAAGCAGGTCCAGGGCATCTaGCTCCTTCGTGCCATTTTG +
Preference number: 4 (lower is better)
Translates to: TSGRGVALCLSTHRLWWKQVQGI*LLRAIL
Trigger: CAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTG...CTTCCACCAGAGTCGGTGAGTGGAGAGGCACAATGCCACTCCCCTTCCTGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp CAGGAGGATCCACTGGCCTCTGTGTTCGGCCTAAAACCTGGGATGTCCCATGGGCAGGTCCAGGGCATCTaGCTCCTTCGTGCCATTTTG +
Preference number: 4 (lower is better)
Translates to: QEDPLASVFGLKPGMSHGQVQGI*LLRAIL
Trigger: CAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTG...CCCATGGGACATCCCAGGTTTTAGGCCGAACACAGAGGCCAGTGGATCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp TTCTCTCTTCTCTCTCAGGCTCTCTGTCCCGCTGATGGTGGACCACGGCCCCTGGCCTCTTTGCTTGGCTaGGTTAGTGCTTCCCCTAGT +
Preference number: 4 (lower is better)
Translates to: FSLLSQALCPADGGPRPLASLLG*VSASPS
Trigger: ACTAGGGGAAGCACTAACCCAGCCAAGCAAAGAGGC...CAGGGGCCGTGGTCCACCATCAGCGGGACAGAGAGCCTGAGAGAGAAGAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CCA 90 bp AGCATGCCATTCAACCTCTCTGAGCCACGGTTTCCTTGCCTGAAAAATGGGAGTAGGCGCTGTAGGTCATaGAGCCCAGGGGCGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SMPFNLSEPRFPCLKNGSRRCRS*SPGAPP
Trigger: TGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCCT...ACTCCCATTTTTCAGGCAAGGAAACCGTGGCTCAGAGAGGTTGAATGGCATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp TTTGCACCCCACGTTGTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGATACCAGCCGCCACTaGCTCGGCGTTCCACTAGCA +
Preference number: 4 (lower is better)
Translates to: FAPHVVQLQFPKQPVIHADTSRH*LGVPLA
Trigger: TGCTAGTGGAACGCCGAGCCAGTGGCGGCTGGTATC...AGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCACAACGTGGGGTGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268933.8
ENST00000512379.5
CDS-3UTR TCA 90 bp GATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGTGGCCTCGCGCACCTTaGTTTCTGCCTCGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: DSGGLANGSKVEAPPGVSWPRAP*FLPRSS
Trigger: ACTACTCCGAGGCAGAAATCAAGGTGCGCGAGGCCA...CGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp CCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGGCTCGGAGCCCGTCTTaGGCAGGTAGTCCAGCAATG +
Preference number: 4 (lower is better)
Translates to: PPWSLWILEVWQMGQRSRARSPS*AGSPAM
Trigger: CATTGCTGGACTACCTGCTCAAGACGGGCTCCGAGC...CCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp TCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGGAGGTATAGCGGGGTaGCGAAGAGGAGGAGTTGTA +
Preference number: 4 (lower is better)
Translates to: SGGLANGSKVEAPPGVSEGGIAG*RRGGVV
Trigger: TACAACTCCTCCTCTTCGTCACCCCGCTATACCTCC...CTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp AGCCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGACCAAGGAGGAAGCTaGGGGACCCAGGAAGGACTC +
Preference number: 4 (lower is better)
Translates to: SPSLVSVDSGGLANGSKVDQGGS*GTQEGL
Trigger: GAGTCCTTCCTGGGTCCCTCAGCTTCCTCCTTGGTC...GACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp TATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGGAACTGGGCCAACGAGTCAAGGTTaGCCAAGGAGGAAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: YAQVQGIWLLRAILLGTGPTSQG*PRRKLR
Trigger: CCTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGG...CCCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp TCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGCCAACGAGTCAAGGTTaGCCAAGGAGGAAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SPSMPRSRASGSFVPFCLPTSQG*PRRKLR
Trigger: CCTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGG...CAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp GCACCCCACGTTGTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGCACGGTTTCCTTGCCTaGAAAATGGGAGTAGTGCCG +
Preference number: 4 (lower is better)
Translates to: APHVVQLQFPKQPVIHAVHGFLA*KMGVVP
Trigger: CGGCACTACTCCCATTTTTCAGGCAAGGAAACCGTG...CACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCACAACGTGGGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR TCA 90 bp GGGTCCGATTCCTCCTGTGTGGCTAAGACTGAGTTTCTCGCTAGCCTTGGCGAATGGATCCCTCCAAGGTaGGCCCAGCACTTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: GSDSSCVAKTEFLASLGEWIPPR*AQHFVH
Trigger: GTGGACAAAGTGCTGGGCTCACCTTGGAGGGATCCA...TTCGCCAAGGCTAGCGAGAAACTCAGTCTTAGCCACACAGGAGGAATCGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR TCA 90 bp CTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCATGTAAGTCTGACTCCTaGGCAGGTGTTCTTGTCCAT +
Preference number: 4 (lower is better)
Translates to: LQFPKQPVIHAVVETRPPCKSDS*AGVLVH
Trigger: ATGGACAAGAACACCTGCTCAGGAGTCAGACTTACA...TGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR GCA 90 bp AGTCTGACTCCTGAGCAGGTGTTCTTGTCCATCCTGTTTGTAACTGCATTGTGGGCGCCGGCGAGCCGGTaGGCATCTGGTTTAGCGTCG +
Preference number: 4 (lower is better)
Translates to: SLTPEQVFLSILFVTALWAPASR*ASGLAS
Trigger: CGACGCTAAACCAGATGCGCACCGGCTCGCCGGCGC...CCACAATGCAGTTACAAACAGGATGGACAAGAACACCTGCTCAGGAGTCAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR GCA 90 bp AGACCCGGCCGCCACACCCCGCAAAAAGTCCACTTGGTGAGAGCTGAGAACGAGTTGCACCCCACGTTGTaGAGCTGCAGTTTCCTAAAC +
Preference number: 4 (lower is better)
Translates to: RPGRHTPQKVHLVRAENELHPTL*SCSFLN
Trigger: GTTTAGGAAACTGCAGCTGCACAACGTGGGGTGCAA...CTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTGGCGGCCGGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR GCA 90 bp AGCATGCCATTCAACCTCTCTGAGCCACGGTTTCCTTGCCTGAAAAATGGGAGTGGGATGGAGGCTGGCTaGAGGCTGCCTGCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: SMPFNLSEPRFPCLKNGSGMEAG*RLPAEP
Trigger: TGGCTCTGCAGGCAGCCTGCAGCCAGCCTCCATCCC...ACTCCCATTTTTCAGGCAAGGAAACCGTGGCTCAGAGAGGTTGAATGGCATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp TCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGCGGAGGTCGTCATaGCTGGAGACTTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SVDSGGLANGSKVEAPPGVRRSS*LETWRW
Trigger: CCACCTCCAAGTCTCCAGCCATGACGACCTCCGCAC...ACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACGATGTTCTTCACCTaGCGCCGGAGTGCGGAGGTC +
Preference number: 4 (lower is better)
Translates to: LGLCGFWRFGKWVKGRGTTMFFT*RRSAEV
Trigger: GACCTCCGCACTCCGGCGCCAGGTGAAGAACATCGT...GGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CTCCTTTCTCTCTTCTCTCTCAGGCTCTCTGTCCCGCTGATGGTGGACCACGGCTCGCGGTCGATGTACTaGAAGTCCTTGAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LLSLFSLRLSVPLMVDHGSRSMY*KSLSVW
Trigger: CCAGACACTCAAGGACTTCCAGTACATCGACCGCGA...GCCGTGGTCCACCATCAGCGGGACAGAGAGCCTGAGAGAGAAGAGAGAAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CCA 90 bp CCTGTGTGGCTAAGACTGAGTTTCTCGCTAGCCTTGGCGAAGCAAGGGAGAGGGGTTCGGCCTAAAACCTaGGATGTCCCATGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: PVWLRLSFSLALAKQGRGVRPKT*DVPWVS
Trigger: GCTGACCCATGGGACATCCCAGGTTTTAGGCCGAAC...CCCTCTCCCTTGCTTCGCCAAGGCTAGCGAGAAACTCAGTCTTAGCCACACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp GTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGTTCGGCCTAAAACCTaGGATGTCCCATGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: VWQMGQRSRHHQVCRRSPVRPKT*DVPWVS
Trigger: GCTGACCCATGGGACATCCCAGGTTTTAGGCCGAAC...TGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp AGACCCGGCCGCCACACCCCGCAAAAAGTCCACTTGGTGAGAGCTGAGAACGAGGGTCTCTGTGGATTCTaGAGGTTTGGCAAATGGGTC +
Preference number: 4 (lower is better)
Translates to: RPGRHTPQKVHLVRAENEGLCGF*RFGKWV
Trigger: GACCCATTTGCCAAACCTCCAGAATCCACAGAGACC...CTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTGGCGGCCGGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CCA 90 bp GGCCCCCAGGAGGATCCACTGGCCTCTGTGTTCGGCCTAAAACCTGGCTGGTTTCCTCCTTGGTCTCTGTaGATTCTGGAGGTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: GPQEDPLASVFGLKPGWFPPWSL*ILEVWQ
Trigger: TTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGG...AAACCAGCCAGGTTTTAGGCCGAACACAGAGGCCAGTGGATCCTCCTGGGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512291.5
CDS-3UTR CCA 90 bp GCTGGGTTAGTGCTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGCATTTTGCTTGGAACTaGGGCTGGGGTCTCCAAACA +
Preference number: 4 (lower is better)
Translates to: AGLVLPLVCPGPGHLAPSHFAWN*GWGLQT
Trigger: TGTTTGGAGACCCCAGCCCCAGTTCCAAGCAAAATG...CGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAGCACTAACCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR CAA 72 bp TCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCACTaGGTGAGAGCTGAGAACGAGGGTTCCAGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: SRPGRHTPQKVH*VRAENEGSSLY
Trigger: ATAAAGACTGGAACCCTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
3UTR CAA 72 bp TCCAGCCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTaGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGT +
Preference number: 4 (lower is better)
Translates to: SSPSLVSVDSGG*ANGSKVEAPPG
Trigger: ACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp TCATCCTTGAGCAGGGCCATCACCTGCTTGACCTTCTCGCGCACGTTGACGCCCAAAAAGTCCACTTGGTaGGAGCTGAGAACGAGGGTT +
Preference number: 4 (lower is better)
Translates to: SSLSRAITCLTFSRTLTPKKSTW*ELRTRV
Trigger: AACCCTCGTTCTCAGCTCTCACCAAGTGGACTTTTT...GGGCGTCAACGTGCGCGAGAAGGTCAAGCAGGTGATGGCCCTGCTCAAGGATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512379.5
CDS-3UTR GCA 90 bp TCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGCTTTGCAACCTGGGGTaGCTTGACCAACGAGTCAAG +
Preference number: 4 (lower is better)
Translates to: SPSMPRSRASGSFVPFCLLCNLG*LDQRVK
Trigger: CTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAAG...CAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp GTGATTCTTGTTAGGGTCAAACCTTGGAGCAGAACTTTGAACCCTGTAAGTCTGAGAGGAAGGGGTTGGTaGCGGTCTGCGGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: VILVRVKPWSRTLNPVSLRGRGW*RSAGAG
Trigger: CCCCGCCCCCGCAGACCGGCACCAACCCCTTCCTCT...CAGACTTACAGGGTTCAAAGTTCTGCTCCAAGGTTTGACCCTAACAAGAATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp CCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGAGCAGCTGCATCCTTaGGTTCCACATGGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PLLGLCGFWRFGKWVKGREQLHP*VPHGAP
Trigger: TGGAGCCCCATGTGGAACCCAAGGATGCAGCTGCTC...TCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CCA 90 bp CGGGTCTTTGCAACCTGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGTGGAGGTTTGGCAAATaGGTCAAAGGTCGAGGCACC +
Preference number: 4 (lower is better)
Translates to: RVFATWGALTNESRLTKEWRFGK*VKGRGT
Trigger: GGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCA...CTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAAGACCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp TGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGGAAGCTGAGGGACCCCATTTTGCTTGGAACTaGGGCTGGGGTCTCCAAACA +
Preference number: 4 (lower is better)
Translates to: WGALTNESRLTKEEAEGPHFAWN*GWGLQT
Trigger: TGTTTGGAGACCCCAGCCCCAGTTCCAAGCAAAATG...GGGTCCCTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CCTGTGTGGCTAAGACTGAGTTTCTCGCTAGCCTTGGCGAAGCAAGGGAGAGGGGCCTCTTTGCTTGGCTaGGTTAGTGCTTCCCCTAGT +
Preference number: 4 (lower is better)
Translates to: PVWLRLSFSLALAKQGRGASLLG*VSASPS
Trigger: ACTAGGGGAAGCACTAACCCAGCCAAGCAAAGAGGC...CCCTCTCCCTTGCTTCGCCAAGGCTAGCGAGAAACTCAGTCTTAGCCACACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR TCA 90 bp TCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCAGCGAGGTCACAGTCTTaGAGGATGGGCTGCCGTGTT +
Preference number: 4 (lower is better)
Translates to: SLVSVDSGGLANGSKVEAARSQS*RMGCRV
Trigger: AACACGGCAGCCCATCCTTCAAGACTGTGACCTCGC...TGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp TCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTCCAACGAGTCAAGGTTaGCCAAGGAGGAAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SVDSGGLANGSKVEAPPGPTSQG*PRRKLR
Trigger: CCTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGG...ACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR TCA 90 bp CAGGAGGATCCACTGGCCTCTGTGTTCGGCCTAAAACCTGGGATGTCCCATGGGAAAAAGTCCACTTGGTaGGAGCTGAGAACGAGGGTT +
Preference number: 4 (lower is better)
Translates to: QEDPLASVFGLKPGMSHGKKSTW*ELRTRV
Trigger: AACCCTCGTTCTCAGCTCTCACCAAGTGGACTTTTT...CCCATGGGACATCCCAGGTTTTAGGCCGAACACAGAGGCCAGTGGATCCTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512379.5
ENST00000537145.2
CDS-3UTR TCA 90 bp CCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGATTCCTAAACAGCCGGTaGTCCACGCTGTGGTCGAGA +
Preference number: 4 (lower is better)
Translates to: PLLGLCGFWRFGKWVKGRFLNSR*STLWSR
Trigger: TCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAA...TCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512379.5
ENST00000537145.2
CDS-3UTR GCA 90 bp CGGGTCTTTGCAACCTGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGCATCTGGCTCCTTCGTaGCATTTTGCTTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: RVFATWGALTNESRLTKEHLAPS*HFAWNW
Trigger: CCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATG...CTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAAGACCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR GCA 90 bp TCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTCCCACGTTGTGCAGCTaGAGTTTCCTAAACAGCCGG +
Preference number: 4 (lower is better)
Translates to: SVDSGGLANGSKVEAPPGPTLCS*SFLNSR
Trigger: CCGGCTGTTTAGGAAACTGCAGCTGCACAACGTGGG...ACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512379.5
ENST00000537145.2
CDS-3UTR GCA 90 bp CCTGTGTGGCTAAGACTGAGTTTCTCGCTAGCCTTGGCGAAGCAAGGGAGAGGGTTGCACCCCACGTTGTaGAGCTGCAGTTTCCTAAAC +
Preference number: 4 (lower is better)
Translates to: PVWLRLSFSLALAKQGRGLHPTL*SCSFLN
Trigger: GTTTAGGAAACTGCAGCTGCACAACGTGGGGTGCAA...CCCTCTCCCTTGCTTCGCCAAGGCTAGCGAGAAACTCAGTCTTAGCCACACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR GCA 90 bp GCACCCCACGTTGTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGAGCCACGGTTTCCTTaGCTGAAAAATGGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: APHVVQLQFPKQPVIHAVEPRFP*LKNGSS
Trigger: ACTACTCCCATTTTTCAGGCAAGGAAACCGTGGCTC...CACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCACAACGTGGGGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR GCA 90 bp CTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTAGGCCACTTGATTTCTaGCTCGGAGTAGTTGTGCAC +
Preference number: 4 (lower is better)
Translates to: LPLVCPGPGHLAPSCHFARPLDF*LGVVVH
Trigger: GTGCACAACTACTCCGAGGCAGAAATCAAGTGGCCT...AGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CCA 90 bp CCTGTGTGGCTAAGACTGAGTTTCTCGCTAGCCTTGGCGAAGCAAGGGAGAGGGGGATGGAGGACTGGCTaGTTTTTAGCTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PVWLRLSFSLALAKQGRGGWRTG*FLASPP
Trigger: AGGAGGAGAAGCTAAAAACCAGCCAGTCCTCCATCC...CCCTCTCCCTTGCTTCGCCAAGGCTAGCGAGAAACTCAGTCTTAGCCACACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp GTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGGATGGAGGACTGGCTaGTTTTTAGCTTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VWQMGQRSRHHQVCRRSPGWRTG*FLASPP
Trigger: AGGAGGAGAAGCTAAAAACCAGCCAGTCCTCCATCC...TGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512379.5
CDS-3UTR CCA 90 bp AGCCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCACCTGGGATGTCCCATaGGTCAGCAGAGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: SPSLVSVDSGGLANGSKVTWDVP*VSRAVC
Trigger: ACACACTGCTCTGCTGACCCATGGGACATCCCAGGT...GACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp AGCCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGTTCGGCCTAAAACCTaGGATGTCCCATGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: SPSLVSVDSGGLANGSKVVRPKT*DVPWVS
Trigger: GCTGACCCATGGGACATCCCAGGTTTTAGGCCGAAC...GACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCACCTCCTTGGTCTCTGTaGATTCTGGAGGTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: VWQMGQRSRHHQVCRRSPPPWSL*ILEVWQ
Trigger: TTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGG...TGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp TCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTCAGGTCCAGGGCATCTaGCTCCTTCGTGCCATTTTG +
Preference number: 4 (lower is better)
Translates to: SVDSGGLANGSKVEAPPGQVQGI*LLRAIL
Trigger: CAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTG...ACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
3UTR CAA 72 bp CACATCAGTGTCCAGTGGTCCAGTGATCAGGGAGCATaGAGAAGAAAAACAGGCGAGGGTGGTCATAGGGGC +
Preference number: 4 (lower is better)
Translates to: HISVQWSSDQGA*RRKTGEGGHRG
Trigger: GCCCCTATGACCACCCTCGCCTGTTTTTCTTCTCAATGCTCCCTGATCACTGGACCACTGGACACTGATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR TCA 90 bp GGGTCCGATTCCTCCTGTGTGGCTAAGACTGAGTTTCTCGCTAGCCTTGGCGAAGTGATCAGGGAGCATTaGGAAGAAAAACAGGCGAGG +
Preference number: 4 (lower is better)
Translates to: GSDSSCVAKTEFLASLGEVIREH*EEKQAR
Trigger: CCTCGCCTGTTTTTCTTCTCAATGCTCCCTGATCAC...TTCGCCAAGGCTAGCGAGAAACTCAGTCTTAGCCACACAGGAGGAATCGGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR GCA 90 bp TTTGCACCCCACGTTGTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTCATCTGGCTCCTTCGTaGCATTTTGCTTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: FAPHVVQLQFPKQPVIHAHLAPS*HFAWNW
Trigger: CCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATG...AGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCACAACGTGGGGTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR GCA 90 bp GATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGCATCTGGCTCCTTCGTaGCATTTTGCTTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: DSGGLANGSKVEAPPGVSHLAPS*HFAWNW
Trigger: CCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATG...CGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp ATTCTTGTTAGGGTCAAACCTTGGAGCAGAACTTTGAACCCTGTAAGTCTGACTAGGTTCTCGCGGCACTaGTGGGCCACCCGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: ILVRVKPWSRTLNPVSLTRFSRH*WATRSE
Trigger: CTCCGAGCGGGTGGCCCACCAGTGCCGCGAGAACCT...AGTCAGACTTACAGGGTTCAAAGTTCTGCTCCAAGGTTTGACCCTAACAAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp CCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGCCTCTTTGCTTGGCTaGGTTAGTGCTTCCCCTAGT +
Preference number: 4 (lower is better)
Translates to: PLLGLCGFWRFGKWVKGRASLLG*VSASPS
Trigger: ACTAGGGGAAGCACTAACCCAGCCAAGCAAAGAGGC...TCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CCCCCAGGAGGATCCACTGGCCTCTGTGTTCGGCCTAAAACCTGGCTGGTTTTTGTTCGGCCTAAAACCTaGCTGGTTTTTAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PPGGSTGLCVRPKTWLVFVRPKT*LVFSFS
Trigger: GGAGAAGCTAAAAACCAGCCAGGTTTTAGGCCGAAC...AAAAACCAGCCAGGTTTTAGGCCGAACACAGAGGCCAGTGGATCCTCCTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512291.5
3UTR CAA 72 bp AGGGTTGAGAAGAGCTGTAAAGGAAGCGGGGCAGTTTaGCACCCCACGTTGTGCAGCTGCAGTTTCCTAAAC +
Preference number: 4 (lower is better)
Translates to: RVEKSCKGSGAV*HPTLCSCSFLN
Trigger: GTTTAGGAAACTGCAGCTGCACAACGTGGGGTGCAAAACTGCCCCGCTTCCTTTACAGCTCTTCTCAACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR TCA 90 bp ACTTGGCTTCTGCCACAGCCGCATCACGTGCCCCTGGCTTGTCTACCCTGCTGCCCACTTATTACTAAGTaGTTCTTGTTAGGGTCAAAC +
Preference number: 4 (lower is better)
Translates to: TWLLPQPHHVPLACLPCCPLITK*FLLGSN
Trigger: GTTTGACCCTAACAAGAATCACTTAGTAATAAGTGG...GCAGCAGGGTAGACAAGCCAGGGGCACGTGATGCGGCTGTGGCAGAAGCCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR GCA 90 bp AAACTGATCTGCTTAGCACGTAAGCAGTACCCAATAAATAGGAACAAAGGCCTACACCTGGCGCCGGAGTaGGGAGGTCGTCATGGCTGG +
Preference number: 4 (lower is better)
Translates to: KLICLARKQYPINRNKGLHLAPE*GGRHGW
Trigger: CCAGCCATGACGACCTCCGCACTCCGGCGCCAGGTG...TAGGCCTTTGTTCCTATTTATTGGGTACTGCTTACGTGCTAAGCAGATCAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp TCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGGTCTCTGTGGATTCTaGAGGTTTGGCAAATGGGTC +
Preference number: 4 (lower is better)
Translates to: SVDSGGLANGSKVEAPPGGLCGF*RFGKWV
Trigger: GACCCATTTGCCAAACCTCCAGAATCCACAGAGACC...ACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp AGCCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGGTCTCTGTGGATTCTaGAGGTTTGGCAAATGGGTC +
Preference number: 4 (lower is better)
Translates to: SPSLVSVDSGGLANGSKVGLCGF*RFGKWV
Trigger: GACCCATTTGCCAAACCTCCAGAATCCACAGAGACC...GACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp TTTGCAACCTGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGGAAGCTCCTCCTTGGTCTCTGTaGATTCTGGAGGTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: FATWGALTNESRLTKEEAPPWSL*ILEVWQ
Trigger: TTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGG...AGCTTCCTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CAGCCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCATTTTGCTTGGAACTaGGGCTGGGGTCTCCAAACA +
Preference number: 4 (lower is better)
Translates to: QPLLGLCGFWRFGKWVKGHFAWN*GWGLQT
Trigger: TGTTTGGAGACCCCAGCCCCAGTTCCAAGCAAAATG...ACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp TCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTCATTTTGCTTGGAACTaGGGCTGGGGTCTCCAAACA +
Preference number: 4 (lower is better)
Translates to: SVDSGGLANGSKVEAPPGHFAWN*GWGLQT
Trigger: TGTTTGGAGACCCCAGCCCCAGTTCCAAGCAAAATG...ACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp CACACCCCGCAAAAAGTCCACTTGGTGAGAGCTGAGAACGAGGGTTCCAGTCTTTTTGTAACTGCATTGTaGGACTCCCTTCCCCTACCC +
Preference number: 4 (lower is better)
Translates to: HTPQKVHLVRAENEGSSLFVTAL*DSLPLP
Trigger: GGGTAGGGGAAGGGAGTCCCACAATGCAGTTACAAA...AAGACTGGAACCCTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp CCTGTGTGGCTAAGACTGAGTTTCTCGCTAGCCTTGGCGAAGCAAGGGAGAGGGGTTAGGGTCAAACCTTaGAGCAGAACTTTGAACCCT +
Preference number: 4 (lower is better)
Translates to: PVWLRLSFSLALAKQGRGVRVKP*SRTLNP
Trigger: AGGGTTCAAAGTTCTGCTCCAAGGTTTGACCCTAAC...CCCTCTCCCTTGCTTCGCCAAGGCTAGCGAGAAACTCAGTCTTAGCCACACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR TCA 90 bp AAACTGATCTGCTTAGCACGTAAGCAGTACCCAATAAATAGGAACAAAGGCCTATGGGGGACGGAGCGCTaGGACCTGTCAGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: KLICLARKQYPINRNKGLWGTER*DLSGRG
Trigger: ACCCCTTCCTGACAGGTCTCAGCGCTCCGTCCCCCA...TAGGCCTTTGTTCCTATTTATTGGGTACTGCTTACGTGCTAAGCAGATCAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR GCA 90 bp GTGATTCTTGTTAGGGTCAAACCTTGGAGCAGAACTTTGAACCCTGTAAGTCTGAAGGGTCAGCCCCAGTaGTGGGGAGTTTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: VILVRVKPWSRTLNPVSLKGQPQ*WGVCGG
Trigger: CCCACCACAAACTCCCCAGCACTGGGGCTGACCCTT...CAGACTTACAGGGTTCAAAGTTCTGCTCCAAGGTTTGACCCTAACAAGAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR GCA 90 bp CTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTTCCAGTCTTTATTATaGGGGCGTTCAGTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: LPLVCPGPGHLAPSCHFAFQSLL*GRSVSS
Trigger: GCTAGAAACTGAACGCCCGCATAATAAAGACTGGAA...AGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CCA 90 bp CCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGATGGATTCTGGAGGTTTaGCAAATGGGTCAAAGGTCG +
Preference number: 4 (lower is better)
Translates to: PLLGLCGFWRFGKWVKGRWILEV*QMGQRS
Trigger: CGACCTTTGACCCATTTGCCAAACCTCCAGAATCCA...TCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp TCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCTCCTTGGTCTCTGTaGATTCTGGAGGTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: SLVSVDSGGLANGSKVEAPPWSL*ILEVWQ
Trigger: TTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGG...TGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CCA 90 bp GTGATTCTTGTTAGGGTCAAACCTTGGAGCAGAACTTTGAACCCTGTAAGTCTGGGGAGCTCCTGCACTTaGCTTCTGCCACAGCCGCAT +
Preference number: 4 (lower is better)
Translates to: VILVRVKPWSRTLNPVSLGSSCT*LLPQPH
Trigger: ATGCGGCTGTGGCAGAAGCCAAGTGCAGGAGCTCCC...CAGACTTACAGGGTTCAAAGTTCTGCTCCAAGGTTTGACCCTAACAAGAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR GCA 90 bp GATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGTTCCAGTCTTTATTATaGGGGCGTTCAGTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: DSGGLANGSKVEAPPGVSFQSLL*GRSVSS
Trigger: GCTAGAAACTGAACGCCCGCATAATAAAGACTGGAA...CGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
CDS-3UTR GCA 90 bp AAACTGATCTGCTTAGCACGTAAGCAGTACCCAATAAATAGGAACAAAGGCCTATGGCTGCAGGCTGCCTaGAGAGCCAGACCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: KLICLARKQYPINRNKGLWLQAA*RARPQA
Trigger: TGCTTGGGGTCTGGCTCTGCAGGCAGCCTGCAGCCA...TAGGCCTTTGTTCCTATTTATTGGGTACTGCTTACGTGCTAAGCAGATCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR GCA 90 bp GTGATTCTTGTTAGGGTCAAACCTTGGAGCAGAACTTTGAACCCTGTAAGTCTGAGGGGAGTGGCATTGTaGCTCTCCACTCACCGACTC +
Preference number: 4 (lower is better)
Translates to: VILVRVKPWSRTLNPVSLRGVAL*LSTHRL
Trigger: GAGTCGGTGAGTGGAGAGGCACAATGCCACTCCCCT...CAGACTTACAGGGTTCAAAGTTCTGCTCCAAGGTTTGACCCTAACAAGAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp GTGATTCTTGTTAGGGTCAAACCTTGGAGCAGAACTTTGAACCCTGTAAGTCTGGCTTGGAACTGGGGCTaGGGTCTCCAAACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: VILVRVKPWSRTLNPVSLAWNWG*GLQTGP
Trigger: TGGACCTGTTTGGAGACCCCAGCCCCAGTTCCAAGC...CAGACTTACAGGGTTCAAAGTTCTGCTCCAAGGTTTGACCCTAACAAGAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR TCA 90 bp AGCATGCCATTCAACCTCTCTGAGCCACGGTTTCCTTGCCTGAAAAATGGGAGTAAAAAGTCCACTTGGTaGGAGCTGAGAACGAGGGTT +
Preference number: 4 (lower is better)
Translates to: SMPFNLSEPRFPCLKNGSKKSTW*ELRTRV
Trigger: AACCCTCGTTCTCAGCTCTCACCAAGTGGACTTTTT...ACTCCCATTTTTCAGGCAAGGAAACCGTGGCTCAGAGAGGTTGAATGGCATGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR TCA 90 bp ATTCTTGTTAGGGTCAAACCTTGGAGCAGAACTTTGAACCCTGTAAGTCTGACTAAGGCCATTTGTCCCTaGAAGGGGGATGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ILVRVKPWSRTLNPVSLTKAICP*KGDGGW
Trigger: CCAGCCTCCATCCCCCTTTCAGGGACAAATGGCCTT...AGTCAGACTTACAGGGTTCAAAGTTCTGCTCCAAGGTTTGACCCTAACAAGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp AGTCTGACTCCTGAGCAGGTGTTCTTGTCCATCCTGTTTGTAACTGCATTGTGGCCTCCTTGGTCTCTGTaGATTCTGGAGGTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: SLTPEQVFLSILFVTALWPPWSL*ILEVWQ
Trigger: TTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGG...CCACAATGCAGTTACAAACAGGATGGACAAGAACACCTGCTCAGGAGTCAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR CAA 72 bp GATACCTGTGCAATCGCACTGCAGTGGGCTTTGCGCTaGGTTTCATGCTCTGTTGTCCCTGTTTTGAAATTC +
Preference number: 4 (lower is better)
Translates to: DTCAIALQWALR*VSCSVVPVLKF
Trigger: GAATTTCAAAACAGGGACAACAGAGCATGAAACCAAGCGCAAAGCCCACTGCAGTGCGATTGCACAGGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
3UTR CAA 72 bp TTGAACCCTGTAAGTCTGACTCCTGAGCAGGTGTTCTaGTCCATCCTGTTTGTAACTGCATTGTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: LNPVSLTPEQVF*SILFVTALWDS
Trigger: GGAGTCCCACAATGCAGTTACAAACAGGATGGACAAGAACACCTGCTCAGGAGTCAGACTTACAGGGTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR TCA 90 bp GGGTCCGATTCCTCCTGTGTGGCTAAGACTGAGTTTCTCGCTAGCCTTGGCGAAGAGTTACATTTAAGGTaGCTCAGTAAAACAAAGGAG +
Preference number: 4 (lower is better)
Translates to: GSDSSCVAKTEFLASLGEELHLR*LSKTKE
Trigger: CTCCTTTGTTTTACTGAGTCACCTTAAATGTAACTC...TTCGCCAAGGCTAGCGAGAAACTCAGTCTTAGCCACACAGGAGGAATCGGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp GTGATTCTTGTTAGGGTCAAACCTTGGAGCAGAACTTTGAACCCTGTAAGTCTGCACAGTCTTGAAGGATaGGCTGCCGTGTTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: VILVRVKPWSRTLNPVSLHSLEG*AAVLAE
Trigger: CTCTGCTAACACGGCAGCCCATCCTTCAAGACTGTG...CAGACTTACAGGGTTCAAAGTTCTGCTCCAAGGTTTGACCCTAACAAGAATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp AAACTGATCTGCTTAGCACGTAAGCAGTACCCAATAAATAGGAACAAAGGCCTACGGGTCTTTGCAACCTaGGGTGCCTTGACCAACGAG +
Preference number: 4 (lower is better)
Translates to: KLICLARKQYPINRNKGLRVFAT*GALTNE
Trigger: CTCGTTGGTCAAGGCACCCCAGGTTGCAAAGACCCG...TAGGCCTTTGTTCCTATTTATTGGGTACTGCTTACGTGCTAAGCAGATCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CCA 90 bp AAACTGATCTGCTTAGCACGTAAGCAGTACCCAATAAATAGGAACAAAGGCCTATCCACTCACCGACTCTaGTGGAAGGCCATTTGTCCC +
Preference number: 4 (lower is better)
Translates to: KLICLARKQYPINRNKGLSTHRL*WKAICP
Trigger: GGGACAAATGGCCTTCCACCAGAGTCGGTGAGTGGA...TAGGCCTTTGTTCCTATTTATTGGGTACTGCTTACGTGCTAAGCAGATCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR GCA 90 bp AGTCTGACTCCTGAGCAGGTGTTCTTGTCCATCCTGTTTGTAACTGCATTGTGGTTCCAGTCTTTATTATaGGGGCGTTCAGTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: SLTPEQVFLSILFVTALWFQSLL*GRSVSS
Trigger: GCTAGAAACTGAACGCCCGCATAATAAAGACTGGAA...CCACAATGCAGTTACAAACAGGATGGACAAGAACACCTGCTCAGGAGTCAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CAA 90 bp CAGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGCCCGCGCCGAACGGGTaGGTGGGGGACGGAGCGCTG +
Preference number: 5 (lower is better)
Translates to: QRLRCEGSGLREDANRGGPAPNG*VGDGAL
Trigger: CAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGG...CCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS GCA 90 bp TCCAGTGCGGGCTCCCTCGGCCCCAGCCCCAGCCCGAGTAGCCTCTaGGGTGACCCTCCGACCTGTGCAGCAGCGGGACGGCACAGCCTC +
Preference number: 5 (lower is better)
Translates to: SSAGSLGPSPSPSSL*GDPPTCAAAGRHSL
Trigger: GAGGCTGTGCCGTCCCGCTGCTGCACAGGTCGGAGGGTCACCGCAGAGGCTACTCGGGCTGGGGCTGGGGCCGAGGGAGCCCGCACTGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268933.8
ENST00000503690.5
ENST00000504857.1
ENST00000510045.5
ENST00000510462.5
ENST00000512379.5
ENST00000515028.5
CDS-3UTR CAA 90 bp GCCGGCGAGCCGGTGCGCATCTGGTTTAGCGTCGGCCTGCCCGGCTCGCCCGCGTCTTCCCGCGTGCGTTaGCCTCCTAGCCAGCGCCAG +
Preference number: 5 (lower is better)
Translates to: AGEPVRIWFSVGLPGSPASSRVR*PPSQRQ
Trigger: CTGGCGCTGGCTAGGAGGCAAACGCACGCGGGAAGA...CGCGGGCGAGCCGGGCAGGCCGACGCTAAACCAGATGCGCACCGGCTCGCCGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CAA 90 bp GTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCGGCGTTCCACCCGCGCCGAACGGGTaGGTGGGGGACGGAGCGCTG +
Preference number: 5 (lower is better)
Translates to: VQLPEPPRDTSRHWLGVPPAPNG*VGDGAL
Trigger: CAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGG...TGGAACGCCGAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CAA 90 bp GCCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCCCCGCGCCGAACGGGTaGGTGGGGGACGGAGCGCTG +
Preference number: 5 (lower is better)
Translates to: AGDPRCGRDPAATPRKKSPAPNG*VGDGAL
Trigger: CAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGG...GGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CAA 90 bp GGCGCTGTAGGTCATGGAGCCCAGGGGCGCCCCCACAGGCCCGCCTGCCAGGCCAGGGCCATCACCTGCTaGACCTTCTCGCGCACGTTG +
Preference number: 5 (lower is better)
Translates to: GAVGHGAQGRPHRPACQARAITC*TFSRTL
Trigger: CAACGTGCGCGAGAAGGTCAAGCAGGTGATGGCCCT...GGCCTGGCAGGCGGGCCTGTGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp GGCGCTGTAGGTCATGGAGCCCAGGGGCGCCCCCACAGGCCCGCCTGCCAGGCCAGTGCCATGCGCTCCTaGGTCTTGAGGGCGTGGGTT +
Preference number: 5 (lower is better)
Translates to: GAVGHGAQGRPHRPACQASAMRS*VLRAWV
Trigger: AACCCACGCCCTCAAGACCAAGGAGCGCATGGCACT...GGCCTGGCAGGCGGGCCTGTGGGGGCGCCCCTGGGCTCCATGACCTACAGCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp CCTGCCCGGCTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCCCAGTGCTGGGGAGTTaGTGGTGGGGAGAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: PARLARAERVGGGRSAETPVLGS*WWGEFR
Trigger: CCTGAACTCTCCCCACCACAAACTCCCCAGCACTGG...GGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAGCCGGGCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp TCGGCGTGGGCAGCAGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTTCTTGCCGCTGTCATaGAGCCGCCGCCACAGCATG +
Preference number: 5 (lower is better)
Translates to: SAWAAAAAVRRLRPAGRRFLPLS*SRRHSM
Trigger: CATGCTGTGGCGGCGGCTCAATGACAGCGGCAAGAA...GCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTGCTGCCCACGCCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp GGCTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTGTCAGGATGCGCTCCTTGGTCTaGAGGGCGTGGGTTCGCTCC +
Preference number: 5 (lower is better)
Translates to: GSPAPNGLVGDGALRPVRMRSLV*RAWVRS
Trigger: GGAGCGAACCCACGCCCTCAAGACCAAGGAGCGCAT...CCTGACAGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp CTGCCCGGCTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTCCAGTGCTGGGGAGTTaGTGGTGGGGAGAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: LPGSPAPNGLVGDGALRPPVLGS*WWGEFR
Trigger: CCTGAACTCTCCCCACCACAAACTCCCCAGCACTGG...AGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAGCCGGGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp GCATGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCTGAGGGGACCCGCGCCGAACGGGTaGGTGGGGGACGGAGCGCTG +
Preference number: 5 (lower is better)
Translates to: AWESDPRAGFGTGRFLRGPAPNG*VGDGAL
Trigger: CAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGG...TCCCCTCAGGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCATGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp GATGGTGGACCACGGCCCCTGCACCATTGGCCATGGGGGAGCCATCACCCTGCCGCTCAGAGGAAGGGGTaGGTGCCGGTCTGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: DGGPRPLHHWPWGSHHPAAQRKG*VPVCGG
Trigger: GCCCCCGCAGACCGGCACCAACCCCTTCCTCTGAGC...GGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGTGGTCCACCATC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CAA 90 bp GGCCCCTGCACCATTGGCCATGGGGGAGCCATCACCCTGCCAGGACCTCACCTCGCTCAGAGGAAGGGGTaGGTGCCGGTCTGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: GPCTIGHGGAITLPGPHLAQRKG*VPVCGG
Trigger: GCCCCCGCAGACCGGCACCAACCCCTTCCTCTGAGC...GAGGTGAGGTCCTGGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CAA 90 bp CTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTGTCAGGAAGTCATGGCTGGAGACTaGGAGGTGGGTGGCCCTCGC +
Preference number: 5 (lower is better)
Translates to: LARAERVGGGRSAETCQEVMAGD*EVGGPR
Trigger: GCGAGGGCCACCCACCTCCAAGTCTCCAGCCATGAC...TTCCTGACAGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp CGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCGGCGTTCCATGCGCTCCTTGGTCTaGAGGGCGTGGGTTCGCTCC +
Preference number: 5 (lower is better)
Translates to: RPASRAAAGYQPPLARRSMRSLV*RAWVRS
Trigger: GGAGCGAACCCACGCCCTCAAGACCAAGGAGCGCAT...GGAACGCCGAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CAA 90 bp AGCTCGGCGTGGGCAGCAGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGAAGTGCCATGCGCTCCTaGGTCTTGAGGGCGTGGGTT +
Preference number: 5 (lower is better)
Translates to: SSAWAAAAAVRRLRPAGRSAMRS*VLRAWV
Trigger: AACCCACGCCCTCAAGACCAAGGAGCGCATGGCACT...TCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTGCTGCCCACGCCGAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp CAGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCTAACCGAGGCGGGAGTGCCATGCGCTCCTaGGTCTTGAGGGCGTGGGTT +
Preference number: 5 (lower is better)
Translates to: QRLRCEGSGLREDANRGGSAMRS*VLRAWV
Trigger: AACCCACGCCCTCAAGACCAAGGAGCGCATGGCACT...CCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp CGTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCGGCGTTCCAGAGCAGCTGCATCCTaGGGTTCCACATGGGGCTCC +
Preference number: 5 (lower is better)
Translates to: RPASRAAAGYQPPLARRSRAAAS*GSTWGS
Trigger: GGAGCCCCATGTGGAACCCAAGGATGCAGCTGCTCT...GGAACGCCGAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CAA 90 bp GATGGTGGACCACGGCCCCTGCACCATTGGCCATGGGGGAGCCATCACCCTGCCACGGCCCCTGCACCATaGGCCATGGGGGAGCCATCA +
Preference number: 5 (lower is better)
Translates to: DGGPRPLHHWPWGSHHPATAPAP*AMGEPS
Trigger: TGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGT...GGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGTGGTCCACCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CAA 90 bp CTGCCAGGCCCAGCGCCGGCGAGCCGGTGCGCATCTGGTTTAGCGTCGGCCTGCGCAACCTGGGGTGCCTaGACCAACGAGTCAAGGTTG +
Preference number: 5 (lower is better)
Translates to: LPGPAPASRCASGLASACATWGA*TNESRL
Trigger: CAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGC...GCAGGCCGACGCTAAACCAGATGCGCACCGGCTCGCCGGCGCTGGGCCTGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS GCA 90 bp GGGGCAGCGGCAGGGTCCCTGGAATGGGTAGCAGCTCTTCCCGCGTaGGTTTGCCTCCTAGCCAGCGCCAGGCAGCACTCCGAGGAAAGT +
Preference number: 5 (lower is better)
Translates to: GAAAGSLEWVAALPA*VCLLASARQHSEES
Trigger: ACTTTCCTCGGAGTGCTGCCTGGCGCTGGCTAGGAGGCAAACGCACGCGGGAAGAGCTGCTACCCATTCCAGGGACCCTGCCGCTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503246.1
ENST00000503690.5
ENST00000514874.5
CDS-3UTR CAA 90 bp CGGCCCCTGCACCATTGGCCATGGGGGAGCCATCACCCTGCCAGGACCTCACCTAGCCGCTCCTCATCCTaGAGCAGGGCCATCACCTGC +
Preference number: 5 (lower is better)
Translates to: RPLHHWPWGSHHPARTSPSRSSS*SRAITC
Trigger: GCAGGTGATGGCCCTGCTCAAGGATGAGGAGCGGCT...AGGTGAGGTCCTGGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CAA 90 bp TATGCGGGCGTTCAGTTTCTAGCTCCCGGGCCGTGGTCCGCGTCCCGGCTGAGCAGCCGCTCCTCATCCTaGAGCAGGGCCATCACCTGC +
Preference number: 5 (lower is better)
Translates to: YAGVQFLAPGPWSASRLSSRSSS*SRAITC
Trigger: GCAGGTGATGGCCCTGCTCAAGGATGAGGAGCGGCT...GCTCAGCCGGGACGCGGACCACGGCCCGGGAGCTAGAAACTGAACGCCCGCATA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537145.2
CDS-3UTR CAA 90 bp CTCGCCCGCGCCGAACGGGTTGGTGGGGGACGGAGCGCTGAGACCTGTCAGGAAAGTGCCATGCGCTCCTaGGTCTTGAGGGCGTGGGTT +
Preference number: 5 (lower is better)
Translates to: LARAERVGGGRSAETCQESAMRS*VLRAWV
Trigger: AACCCACGCCCTCAAGACCAAGGAGCGCATGGCACT...TTCCTGACAGGTCTCAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGGCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp CCGGCCTGCGGGAAGACGCTAACCGAGGCGGGGAGGGTCAAGCCAGCTGGCACGCTCCTTCGTGCCATTTaGCTTGGAACTGGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: PACGKTLTEAGRVKPAGTLLRAI*LGTGAG
Trigger: CCCAGCCCCAGTTCCAAGCAAAATGGCACGAAGGAG...CGTGCCAGCTGGCTTGACCCTCCCCGCCTCGGTTAGCGTCTTCCCGCAGGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp TCGGCGTGGGCAGCAGCGGCTGCGGTGCGAAGGCTCCGGCCTGCGGGAAGACGCACCAACGAGTCAAGGTaGACCAAGGAGGAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: SAWAAAAAVRRLRPAGRRTNESR*TKEEAE
Trigger: CTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGGT...GCGTCTTCCCGCAGGCCGGAGCCTTCGCACCGCAGCCGCTGCTGCCCACGCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp GGGAAGACGCTAACCGAGGCGGGGAGGGTCAAGCCAGCTGGCACGCTGCTGAGCGGAAGCGGGGCAGTTTaGCACCCCACGTTGTGCAGC +
Preference number: 5 (lower is better)
Translates to: GKTLTEAGRVKPAGTLLSGSGAV*HPTLCS
Trigger: GCTGCACAACGTGGGGTGCAAAACTGCCCCGCTTCC...GCTCAGCAGCGTGCCAGCTGGCTTGACCCTCCCCGCCTCGGTTAGCGTCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537145.2
CDS-3UTR CAA 90 bp TCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCGGCGTTCCACGGCCTCACCCCACCCTaGGTTTCCCAGACTCCACAT +
Preference number: 5 (lower is better)
Translates to: SSFQSRRGIPAATGSAFHGLTPP*VSQTPH
Trigger: ATGTGGAGTCTGGGAAACCAAGGGTGGGGTGAGGCC...GTGGAACGCCGAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CAA 90 bp CCCAGGAAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTGCTTGGCTGGGTTGTCATGGCTGGAGACTaGGAGGTGGGTGGCCCTCGC +
Preference number: 5 (lower is better)
Translates to: PRKDSGVRQARASLLGWVVMAGD*EVGGPR
Trigger: GCGAGGGCCACCCACCTCCAAGTCTCCAGCCATGAC...AACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTTCCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp GCCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCTTCTTGCCGCTGTCATaGAGCCGCCGCCACAGCATG +
Preference number: 5 (lower is better)
Translates to: AGDPRCGRDPAATPRKKSFLPLS*SRRHSM
Trigger: CATGCTGTGGCGGCGGCTCAATGACAGCGGCAAGAA...GGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CAA 90 bp GGCCCCTGCACCATTGGCCATGGGGGAGCCATCACCCTGCCAGGACCTCACCTCTTCTTGCCGCTGTCATaGAGCCGCCGCCACAGCATG +
Preference number: 5 (lower is better)
Translates to: GPCTIGHGGAITLPGPHLFLPLS*SRRHSM
Trigger: CATGCTGTGGCGGCGGCTCAATGACAGCGGCAAGAA...GAGGTGAGGTCCTGGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CAA 90 bp AGGAGTTGTAGGAGGACGGGGAGCCCCGGGAGCGGCTGTAGTCCTCGCCGTAGCTTCTTGCCGCTGTCATaGAGCCGCCGCCACAGCATG +
Preference number: 5 (lower is better)
Translates to: RSCRRTGSPGSGCSPRRSFLPLS*SRRHSM
Trigger: CATGCTGTGGCGGCGGCTCAATGACAGCGGCAAGAA...GCTACGGCGAGGACTACAGCCGCTCCCGGGGCTCCCCGTCCTCCTACAACTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CAA 90 bp CTCTCTGTCCCGCTGATGGTGGACCACGGCCCCTGCACCATTGGCCATGGGGGAAGCCGCTCCTCATCCTaGAGCAGGGCCATCACCTGC +
Preference number: 5 (lower is better)
Translates to: LSVPLMVDHGPCTIGHGGSRSSS*SRAITC
Trigger: GCAGGTGATGGCCCTGCTCAAGGATGAGGAGCGGCT...TCCCCCATGGCCAATGGTGCAGGGGCCGTGGTCCACCATCAGCGGGACAGAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CAA 90 bp GTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGGGAGGCTCCCCAACGGCCCCTGCACCATaGGCCATGGGGGAGCCATCA +
Preference number: 5 (lower is better)
Translates to: VKGRGTTRCVGGLQGGSPTAPAP*AMGEPS
Trigger: TGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGT...TGGGGAGCCTCCCTGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp CAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGGGAGGCTCCCCAAGACGGCCCCTGCACCATaGGCCATGGGGGAGCCATCA +
Preference number: 5 (lower is better)
Translates to: QRSRHHQVCRRSPGRLPKTAPAP*AMGEPS
Trigger: TGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGT...CTTGGGGAGCCTCCCTGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp TGGACCACGGCCCCTGCACCATTGGCCATGGGGGAGCCATCACCCTGCCAGGACCCAGTGCTGGGGAGTTaGTGGTGGGGAGAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: WTTAPAPLAMGEPSPCQDPVLGS*WWGEFR
Trigger: CCTGAACTCTCCCCACCACAAACTCCCCAGCACTGG...GTCCTGGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGTGGTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CAA 90 bp TCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGCCCGCGCCGAACGGGTaGGTGGGGGACGGAGCGCTG +
Preference number: 5 (lower is better)
Translates to: SPSMPRSRASGSFVPFCLPAPNG*VGDGAL
Trigger: CAGCGCTCCGTCCCCCACCAACCCGTTCGGCGCGGG...CAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp GTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCGGCGTTCCATGGGATCTCCAGGCCTaGGAGCCAGACTGTCTGACT +
Preference number: 5 (lower is better)
Translates to: VQLPEPPRDTSRHWLGVPWDLQA*EPDCLT
Trigger: AGTCAGACAGTCTGGCTCCAAGGCCTGGAGATCCCA...TGGAACGCCGAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CAA 90 bp TGCGGGCGTTCAGTTTCTAGCTCCCGGGCCGTGGTCCGCGTCCAGCTTCCAGAGTGGGAGCTCCTGCACTaGGCTTCTGCCACAGCCGCA +
Preference number: 5 (lower is better)
Translates to: CGRSVSSSRAVVRVQLPEWELLH*ASATAA
Trigger: TGCGGCTGTGGCAGAAGCCAAGTGCAGGAGCTCCCA...CTCTGGAAGCTGGACGCGGACCACGGCCCGGGAGCTAGAAACTGAACGCCCGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS GCA 90 bp GCGGCAGGGTCCCTGGAATGGGTAGCAGCTCTTCCCGCGTGCGTTTaGCTCCTAGCCAGCGCCAGGCAGCACTCCGAGGAAAGTTGCTCA +
Preference number: 5 (lower is better)
Translates to: AAGSLEWVAALPACV*LLASARQHSEESCS
Trigger: TGAGCAACTTTCCTCGGAGTGCTGCCTGGCGCTGGCTAGGAGGCAAACGCACGCGGGAAGAGCTGCTACCCATTCCAGGGACCCTGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503246.1
CDS-3UTR CAA 90 bp TGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCTGAGGGGATCGAGCCGCTCCTCATCCTaGAGCAGGGCCATCACCTGC +
Preference number: 5 (lower is better)
Translates to: WESDPRAGFGTGRFLRGSSRSSS*SRAITC
Trigger: GCAGGTGATGGCCCTGCTCAAGGATGAGGAGCGGCT...CGATCCCCTCAGGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp GGGAAGACGCTAACCGAGGCGGGGAGGGTCAAGCCAGCTGGCACGCTGCTGAGCGCAACCTGGGGTGCCTaGACCAACGAGTCAAGGTTG +
Preference number: 5 (lower is better)
Translates to: GKTLTEAGRVKPAGTLLSATWGA*TNESRL
Trigger: CAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGC...GCTCAGCAGCGTGCCAGCTGGCTTGACCCTCCCCGCCTCGGTTAGCGTCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp AGACCCGGCCGCCACACCCCGCAAAAAGTCCACTTGGTGAGAGCTGAGAACGAGGGGGCCCCTCCTGGATaGAGTACCAGGCCTCACCCC +
Preference number: 5 (lower is better)
Translates to: RPGRHTPQKVHLVRAENEGAPPG*STRPHP
Trigger: GGGGTGAGGCCTGGTACTCAATCCAGGAGGGGCCCC...CTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTGGCGGCCGGGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CAA 90 bp GGGTTAGTGCTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCTCTTCCCGCGTGCGTTaGCCTCCTAGCCAGCGCCAG +
Preference number: 5 (lower is better)
Translates to: GLVLPLVCPGPGHLAPSCSSRVR*PPSQRQ
Trigger: CTGGCGCTGGCTAGGAGGCAAACGCACGCGGGAAGA...GCACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAGCACTAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CAA 90 bp AAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTGCTTGGCTGGGTTAGTGCTGTCATGGCTGGAGACTaGGAGGTGGGTGGCCCTCGC +
Preference number: 5 (lower is better)
Translates to: KDSGVRQARASLLGWVSAVMAGD*EVGGPR
Trigger: GCGAGGGCCACCCACCTCCAAGTCTCCAGCCATGAC...AGCACTAACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp CCCGGCCGCCACACCCCGCAAAAAGTCCACTTGGTGAGAGCTGAGAACGAGGGTATGCGCTCCTTGGTCTaGAGGGCGTGGGTTCGCTCC +
Preference number: 5 (lower is better)
Translates to: PGRHTPQKVHLVRAENEGMRSLV*RAWVRS
Trigger: GGAGCGAACCCACGCCCTCAAGACCAAGGAGCGCAT...ACCCTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTGGCGGCCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CAA 90 bp GTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGTCGAGACCCGGACGGCCCCTGCACCATaGGCCATGGGGGAGCCATCA +
Preference number: 5 (lower is better)
Translates to: VQLQFPKQPVIHAVVETRTAPAP*AMGEPS
Trigger: TGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGT...CCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CAA 90 bp CCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCACTCCTTCGTGCCATTTaGCTTGGAACTGGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: PVIHAVVETRPPHPAKSPLLRAI*LGTGAG
Trigger: CCCAGCCCCAGTTCCAAGCAAAATGGCACGAAGGAG...TGGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CAA 90 bp TGCGGGCGTTCAGTTTCTAGCTCCCGGGCCGTGGTCCGCGTCCAGCTTCCAGAGCTCCTTCGTGCCATTTaGCTTGGAACTGGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: CGRSVSSSRAVVRVQLPELLRAI*LGTGAG
Trigger: CCCAGCCCCAGTTCCAAGCAAAATGGCACGAAGGAG...CTCTGGAAGCTGGACGCGGACCACGGCCCGGGAGCTAGAAACTGAACGCCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CAA 90 bp TCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCGGCGTTCCACACCAACGAGTCAAGGTaGACCAAGGAGGAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: SSFQSRRGIPAATGSAFHTNESR*TKEEAE
Trigger: CTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGGT...GTGGAACGCCGAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CAA 90 bp ACTTGGCTTCTGCCACAGCCGCATCACGTGCCCCTGGCTTGTCTACCCTGCTGCGGAAGCGGGGCAGTTTaGCACCCCACGTTGTGCAGC +
Preference number: 5 (lower is better)
Translates to: TWLLPQPHHVPLACLPCCGSGAV*HPTLCS
Trigger: GCTGCACAACGTGGGGTGCAAAACTGCCCCGCTTCC...GCAGCAGGGTAGACAAGCCAGGGGCACGTGATGCGGCTGTGGCAGAAGCCAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CAA 90 bp AGACCCGGCCGCCACACCCCGCAAAAAGTCCACTTGGTGAGAGCTGAGAACGAGTCACGTGCCCCTGGCTaGTCTACCCTGCTGCGCTCG +
Preference number: 5 (lower is better)
Translates to: RPGRHTPQKVHLVRAENESRAPG*STLLRS
Trigger: CGAGCGCAGCAGGGTAGACAAGCCAGGGGCACGTGA...CTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTGGCGGCCGGGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CAA 90 bp ACCTCAGGAAGGGGAGTGGCATTGTGCCTCTCCACTCACCGACTCTGGTGGAAGGTCATGGCTGGAGACTaGGAGGTGGGTGGCCCTCGC +
Preference number: 5 (lower is better)
Translates to: TSGRGVALCLSTHRLWWKVMAGD*EVGGPR
Trigger: GCGAGGGCCACCCACCTCCAAGTCTCCAGCCATGAC...CTTCCACCAGAGTCGGTGAGTGGAGAGGCACAATGCCACTCCCCTTCCTGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CAA 90 bp AGGAGAGCATGGGAGTCAGATCCCAGGGCTGGCTTCGGGACAGGACGGTTCCTGAGGGCCATCACCTGCTaGACCTTCTCGCGCACGTTG +
Preference number: 5 (lower is better)
Translates to: RRAWESDPRAGFGTGRFLRAITC*TFSRTL
Trigger: CAACGTGCGCGAGAAGGTCAAGCAGGTGATGGCCCT...CAGGAACCGTCCTGTCCCGAAGCCAGCCCTGGGATCTGACTCCCATGCTCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp CTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGTCGAGACCCGGCCGCCAAGGGCCATCACCTGCTaGACCTTCTCGCGCACGTTG +
Preference number: 5 (lower is better)
Translates to: LQFPKQPVIHAVVETRPPRAITC*TFSRTL
Trigger: CAACGTGCGCGAGAAGGTCAAGCAGGTGATGGCCCT...TGGCGGCCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CAA 90 bp GTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGTCGAGACCCGGATGCGCTCCTTGGTCTaGAGGGCGTGGGTTCGCTCC +
Preference number: 5 (lower is better)
Translates to: VQLQFPKQPVIHAVVETRMRSLV*RAWVRS
Trigger: GGAGCGAACCCACGCCCTCAAGACCAAGGAGCGCAT...CCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CAA 90 bp ACCCCCACCTCAGGAAGGGGAGTGGCATTGTGCCTCTCCACTCACCGACTCTGGAGTGCCATGCGCTCCTaGGTCTTGAGGGCGTGGGTT +
Preference number: 5 (lower is better)
Translates to: TPTSGRGVALCLSTHRLWSAMRS*VLRAWV
Trigger: AACCCACGCCCTCAAGACCAAGGAGCGCATGGCACT...CCAGAGTCGGTGAGTGGAGAGGCACAATGCCACTCCCCTTCCTGAGGTGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CAA 90 bp GGCCTAAAACCTGGGATGTCCCATGGGTCAGCAGAGCAGTGTGTGGAGGGCGGGCCAGTGCTGGGGAGTTaGTGGTGGGGAGAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: GLKPGMSHGSAEQCVEGGPVLGS*WWGEFR
Trigger: CCTGAACTCTCCCCACCACAAACTCCCCAGCACTGG...CCCGCCCTCCACACACTGCTCTGCTGACCCATGGGACATCCCAGGTTTTAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp TCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCGGCGTTCCACGTGGATTCTGGAGGTTaGGCAAATGGGTCAAAGGTC +
Preference number: 5 (lower is better)
Translates to: SSFQSRRGIPAATGSAFHVDSGG*ANGSKV
Trigger: GACCTTTGACCCATTTGCCAAACCTCCAGAATCCAC...GTGGAACGCCGAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CAA 90 bp CTTCGGGACAGGACGGTTCCTGAGGGGATCGGAGACCAGGGGTCTGCAGAAGGCGCAACCTGGGGTGCCTaGACCAACGAGTCAAGGTTG +
Preference number: 5 (lower is better)
Translates to: LRDRTVPEGIGDQGSAEGATWGA*TNESRL
Trigger: CAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGC...GCCTTCTGCAGACCCCTGGTCTCCGATCCCCTCAGGAACCGTCCTGTCCCGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp GGGTCCGATTCCTCCTGTGTGGCTAAGACTGAGTTTCTCGCTAGCCTTGGCGAAGCTCAGAGGAAGGGGTaGGTGCCGGTCTGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: GSDSSCVAKTEFLASLGEAQRKG*VPVCGG
Trigger: GCCCCCGCAGACCGGCACCAACCCCTTCCTCTGAGC...TTCGCCAAGGCTAGCGAGAAACTCAGTCTTAGCCACACAGGAGGAATCGGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CAA 90 bp CCTGCTCCAGGTCGGAGGTATAGCGGGGTGACGAAGAGGAGGAGTTGTAGGAGGTTCTTGCCGCTGTCATaGAGCCGCCGCCACAGCATG +
Preference number: 5 (lower is better)
Translates to: PAPGRRYSGVTKRRSCRRFLPLS*SRRHSM
Trigger: CATGCTGTGGCGGCGGCTCAATGACAGCGGCAAGAA...CCTCCTACAACTCCTCCTCTTCGTCACCCCGCTATACCTCCGACCTGGAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512291.5
ENST00000512379.5
CDS-3UTR CAA 90 bp AGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGGAACTGGGGCTGGGGTTCTTGCCGCTGTCATaGAGCCGCCGCCACAGCATG +
Preference number: 5 (lower is better)
Translates to: RSRASGSFVPFCLELGLGFLPLS*SRRHSM
Trigger: CATGCTGTGGCGGCGGCTCAATGACAGCGGCAAGAA...CCCCAGCCCCAGTTCCAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp GCTGGGTTAGTGCTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGAGGGCCATCACCTGCTaGACCTTCTCGCGCACGTTG +
Preference number: 5 (lower is better)
Translates to: AGLVLPLVCPGPGHLAPSRAITC*TFSRTL
Trigger: CAACGTGCGCGAGAAGGTCAAGCAGGTGATGGCCCT...CGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAGCACTAACCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp TTGCTTGGAACTGGGGCTGGGGTCTCCAAACAGGTCCAGCTCCACAGGGCTGCTAGTGCCATGCGCTCCTaGGTCTTGAGGGCGTGGGTT +
Preference number: 5 (lower is better)
Translates to: LLGTGAGVSKQVQLHRAASAMRS*VLRAWV
Trigger: AACCCACGCCCTCAAGACCAAGGAGCGCATGGCACT...AGCAGCCCTGTGGAGCTGGACCTGTTTGGAGACCCCAGCCCCAGTTCCAAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp ACCCCCACCTCAGGAAGGGGAGTGGCATTGTGCCTCTCCACTCACCGACTCTGGGCAACCTGGGGTGCCTaGACCAACGAGTCAAGGTTG +
Preference number: 5 (lower is better)
Translates to: TPTSGRGVALCLSTHRLWATWGA*TNESRL
Trigger: CAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGC...CCAGAGTCGGTGAGTGGAGAGGCACAATGCCACTCCCCTTCCTGAGGTGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CAA 90 bp GCTGGCTTCGGGACAGGACGGTTCCTGAGGGGATCGGAGACCAGGGGTCTGCAGCCGCAAAAAGTCCACTaGGTGAGAGCTGAGAACGAG +
Preference number: 5 (lower is better)
Translates to: AGFGTGRFLRGSETRGLQPQKVH*VRAENE
Trigger: CTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGG...CTGCAGACCCCTGGTCTCCGATCCCCTCAGGAACCGTCCTGTCCCGAAGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CAA 90 bp GTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGTCGAGACCCGGTCGAGCTCCTGGAGGTaGGATCCCTCCAAGGTGAGC +
Preference number: 5 (lower is better)
Translates to: VQLQFPKQPVIHAVVETRSSSWR*DPSKVS
Trigger: GCTCACCTTGGAGGGATCCAACCTCCAGGAGCTCGA...CCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CAA 90 bp GTCCAGCTTCCAGAGCCGCCGCGGGATACCAGCCGCCACTGGCTCGGCGTTCCAAGTGATCAGGGAGCATaGAGAAGAAAAACAGGCGAG +
Preference number: 5 (lower is better)
Translates to: VQLPEPPRDTSRHWLGVPSDQGA*RRKTGE
Trigger: CTCGCCTGTTTTTCTTCTCAATGCTCCCTGATCACT...TGGAACGCCGAGCCAGTGGCGGCTGGTATCCCGCGGCGGCTCTGGAAGCTGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CAA 90 bp AAGGACTCGGGAGTCCGGCAAGCTCGGGCCTCTTTGCTTGGCTGGGTTAGTGCTAGAGCAGCTGCATCCTaGGGTTCCACATGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: KDSGVRQARASLLGWVSARAAAS*GSTWGC
Trigger: GCAGCCCCATGTGGAACCCAAGGATGCAGCTGCTCT...AGCACTAACCCAGCCAAGCAAAGAGGCCCGAGCTTGCCGGACTCCCGAGTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512291.5
CDS-3UTR CAA 90 bp TGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGGAAGCTGAGGGACCCAGAGCAGCTGCATCCTaGGGTTCCACATGGGGCTCC +
Preference number: 5 (lower is better)
Translates to: WGALTNESRLTKEEAEGPRAAAS*GSTWGS
Trigger: GGAGCCCCATGTGGAACCCAAGGATGCAGCTGCTCT...GGGTCCCTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512379.5
CDS-3UTR CAA 90 bp GCACCCCACGTTGTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGAGGGCCATCACCTGCTaGACCTTCTCGCGCACGTTG +
Preference number: 5 (lower is better)
Translates to: APHVVQLQFPKQPVIHAVRAITC*TFSRTL
Trigger: CAACGTGCGCGAGAAGGTCAAGCAGGTGATGGCCCT...CACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCACAACGTGGGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CAA 90 bp TCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGAGCCGCTCCTCATCCTaGAGCAGGGCCATCACCTGC +
Preference number: 5 (lower is better)
Translates to: SGGLANGSKVEAPPGVSESRSSS*SRAITC
Trigger: GCAGGTGATGGCCCTGCTCAAGGATGAGGAGCGGCT...CTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp TCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGATGCGCTCCTTGGTCTaGAGGGCGTGGGTTCGCTCC +
Preference number: 5 (lower is better)
Translates to: SPSMPRSRASGSFVPFCLMRSLV*RAWVRS
Trigger: GGAGCGAACCCACGCCCTCAAGACCAAGGAGCGCAT...CAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp GTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCACTTGGTGAGCCCAGCACTTaGTCCACAGCAGTCAGTCAA +
Preference number: 5 (lower is better)
Translates to: VIHAVVETRPPHPAKSPLGEPST*STAVSQ
Trigger: TTGACTGACTGCTGTGGACAAAGTGCTGGGCTCACC...AAGTGGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CAA 90 bp CTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCGTCATGGCTGGAGACTaGGAGGTGGGTGGCCCTCGC +
Preference number: 5 (lower is better)
Translates to: LGLCGFWRFGKWVKGRGTVMAGD*EVGGPR
Trigger: GCGAGGGCCACCCACCTCCAAGTCTCCAGCCATGAC...GGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp CAGCCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTGTCATGGCTGGAGACTaGGAGGTGGGTGGCCCTCGC +
Preference number: 5 (lower is better)
Translates to: QPLLGLCGFWRFGKWVKGVMAGD*EVGGPR
Trigger: GCGAGGGCCACCCACCTCCAAGTCTCCAGCCATGAC...ACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp TCTGAGCCACGGTTTCCTTGCCTGAAAAATGGGAGTAGTGCCGGCTGCAAGGTGAGCCGCTCCTCATCCTaGAGCAGGGCCATCACCTGC +
Preference number: 5 (lower is better)
Translates to: SEPRFPCLKNGSSAGCKVSRSSS*SRAITC
Trigger: GCAGGTGATGGCCCTGCTCAAGGATGAGGAGCGGCT...CACCTTGCAGCCGGCACTACTCCCATTTTTCAGGCAAGGAAACCGTGGCTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CAA 90 bp CCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAACGGCCCCTGCACCATaGGCCATGGGGGAGCCATCA +
Preference number: 5 (lower is better)
Translates to: PLLGLCGFWRFGKWVKGRTAPAP*AMGEPS
Trigger: TGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGT...TCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS CCA 90 bp AGTCTTGAAGGATGGGCTGCCGTGTTAGCAGAGCAGCTGCATCCTTaGGTTCCACATGGGGCTCCATCCACAGATGGGAAAGGTGGGGCT +
Preference number: 5 (lower is better)
Translates to: SLEGWAAVLAEQLHP*VPHGAPSTDGKGGA
Trigger: AGCCCCACCTTTCCCATCTGTGGATGGAGCCCCATGTGGAACCCAAGGATGCAGCTGCTCTGCTAACACGGCAGCCCATCCTTCAAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503690.5
ENST00000507467.1
ENST00000507998.5
ENST00000511414.5
ENST00000514874.5
CDS-3UTR CAA 90 bp GATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGAGGGCCATCACCTGCTaGACCTTCTCGCGCACGTTG +
Preference number: 5 (lower is better)
Translates to: DSGGLANGSKVEAPPGVSRAITC*TFSRTL
Trigger: CAACGTGCGCGAGAAGGTCAAGCAGGTGATGGCCCT...CGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp CTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCATGCGCTCCTTGGTCTaGAGGGCGTGGGTTCGCTCC +
Preference number: 5 (lower is better)
Translates to: LGLCGFWRFGKWVKGRGTMRSLV*RAWVRS
Trigger: GGAGCGAACCCACGCCCTCAAGACCAAGGAGCGCAT...GGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp TCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCAACGGCCCCTGCACCATaGGCCATGGGGGAGCCATCA +
Preference number: 5 (lower is better)
Translates to: SLVSVDSGGLANGSKVEATAPAP*AMGEPS
Trigger: TGATGGCTCCCCCATGGCCAATGGTGCAGGGGCCGT...TGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp GGCCTAAAACCTGGGATGTCCCATGGGTCAGCAGAGCAGTGTGTGGAGGGCGGGGTGGATTCTGGAGGTTaGGCAAATGGGTCAAAGGTC +
Preference number: 5 (lower is better)
Translates to: GLKPGMSHGSAEQCVEGGVDSGG*ANGSKV
Trigger: GACCTTTGACCCATTTGCCAAACCTCCAGAATCCAC...CCCGCCCTCCACACACTGCTCTGCTGACCCATGGGACATCCCAGGTTTTAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp TCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGCTCCTTCGTGCCATTTaGCTTGGAACTGGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: SGGLANGSKVEAPPGVSELLRAI*LGTGAG
Trigger: CCCAGCCCCAGTTCCAAGCAAAATGGCACGAAGGAG...CTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp AGGCCCCCAGGAGGATCCACTGGCCTCTGTGTTCGGCCTAAAACCTGGCTGGTTACCAACGAGTCAAGGTaGACCAAGGAGGAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: RPPGGSTGLCVRPKTWLVTNESR*TKEEAE
Trigger: CTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGGT...AACCAGCCAGGTTTTAGGCCGAACACAGAGGCCAGTGGATCCTCCTGGGGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510045.5
ENST00000512291.5
CDS-3UTR CAA 90 bp CTTCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTGCAACCTGGGGTGCCTaGACCAACGAGTCAAGGTTG +
Preference number: 5 (lower is better)
Translates to: LPLVCPGPGHLAPSCHFAATWGA*TNESRL
Trigger: CAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGC...AGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp GTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCAGCAACCTGGGGTGCCTaGACCAACGAGTCAAGGTTG +
Preference number: 5 (lower is better)
Translates to: VWQMGQRSRHHQVCRRSPATWGA*TNESRL
Trigger: CAACCTTGACTCGTTGGTCAAGGCACCCCAGGTTGC...TGGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp GGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTGTGTCGGAGGTCTCCACCAACGAGTCAAGGTaGACCAAGGAGGAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: GLANGSKVEAPPGVSEVSTNESR*TKEEAE
Trigger: CTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGGT...GGAGACCTCCGACACACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp TGGGGTGCCTTGACCAACGAGTCAAGGTTGACCAAGGAGGAAGCTGAGGGACCCCCGCAAAAAGTCCACTaGGTGAGAGCTGAGAACGAG +
Preference number: 5 (lower is better)
Translates to: WGALTNESRLTKEEAEGPPQKVH*VRAENE
Trigger: CTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGG...GGGTCCCTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGGTCAAGGCACCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CAA 90 bp GTGATCCACGCTGTGGTCGAGACCCGGCCGCCACACCCCGCAAAAAGTCCACTTAGGAACAAAGGCCTATaGTCTCTTGCTGTTAGCCCA +
Preference number: 5 (lower is better)
Translates to: VIHAVVETRPPHPAKSPLRNKGL*SLAVSP
Trigger: TGGGCTAACAGCAAGAGACAATAGGCCTTTGTTCCT...AAGTGGACTTTTTGCGGGGTGTGGCGGCCGGGTCTCGACCACAGCGTGGATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CAA 90 bp GGGTCCGATTCCTCCTGTGTGGCTAAGACTGAGTTTCTCGCTAGCCTTGGCGAAAGTTTCTCGCTAGCCTaGGCGAAGCAAGGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: GSDSSCVAKTEFLASLGESFSLA*AKQGRG
Trigger: CCCTCTCCCTTGCTTCGCCAAGGCTAGCGAGAAACT...TTCGCCAAGGCTAGCGAGAAACTCAGTCTTAGCCACACAGGAGGAATCGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CAA 90 bp ACTTGGCTTCTGCCACAGCCGCATCACGTGCCCCTGGCTTGTCTACCCTGCTGCCCTTGGAGCAGAACTTaGAACCCTGTAAGTCTGACT +
Preference number: 5 (lower is better)
Translates to: TWLLPQPHHVPLACLPCCPWSRT*NPVSLT
Trigger: AGTCAGACTTACAGGGTTCAAAGTTCTGCTCCAAGG...GCAGCAGGGTAGACAAGCCAGGGGCACGTGATGCGGCTGTGGCAGAAGCCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS GCA 90 bp CACTCAGCCACTGACCAACTAAATGAGGCCTGGCCAGAGTGTCCCTaGCTCCAGGGACAGCCTTCAGCGGCACACGTTCTTATTTCACTT +
Preference number: 5 (lower is better)
Translates to: HSATDQLNEAWPECP*LQGQPSAAHVLISL
Trigger: AAGTGAAATAAGAACGTGTGCCGCTGAAGGCTGTCCCTGGAGGCAGGGACACTCTGGCCAGGCCTCATTTAGTTGGTCAGTGGCTGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515028.5
CDS CCA 90 bp TTTTGTCTGCTATCTCTTTCCTTCCAGCGGGTCGTGGGCCTTCTGTaGGAATGCCACGGCCACAACTTGTTTAACTCCTGCCCTCCCCCT +
Preference number: 5 (lower is better)
Translates to: FCLLSLSFQRVVGLL*ECHGHNLFNSCPPP
Trigger: AGGGGGAGGGCAGGAGTTAAACAAGTTGTGGCCGTGGCATTCCCACAGAAGGCCCACGACCCGCTGGAAGGAAAGAGATAGCAGACAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000507467.1
ENST00000507709.1
ENST00000511414.5
ENST00000515126.1
CDS-3UTR CAA 90 bp GCCAGGGCAGGTACGAAGATGTCAGCCAAGTCCAGGATGGAGGACTGGCTGGTTGTGGATTCTGGAGGTTaGGCAAATGGGTCAAAGGTC +
Preference number: 5 (lower is better)
Translates to: ARAGTKMSAKSRMEDWLVVDSGG*ANGSKV
Trigger: GACCTTTGACCCATTTGCCAAACCTCCAGAATCCAC...AACCAGCCAGTCCTCCATCCTGGACTTGGCTGACATCTTCGTACCTGCCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512379.5
CDS-3UTR CAA 90 bp TCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAGGCACCACCAGGTCTCCTTCGTGCCATTTaGCTTGGAACTGGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: SVDSGGLANGSKVEAPPGLLRAI*LGTGAG
Trigger: CCCAGCCCCAGTTCCAAGCAAAATGGCACGAAGGAG...ACCTGGTGGTGCCTCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp CCTGTGTGGCTAAGACTGAGTTTCTCGCTAGCCTTGGCGAAGCAAGGGAGAGGGAAGGCCTATTGTCTCTaGCTGTTAGCCCAACCCCAG +
Preference number: 5 (lower is better)
Translates to: PVWLRLSFSLALAKQGRGKAYCL*LLAQPQ
Trigger: CTGGGGTTGGGCTAACAGCAAGAGACAATAGGCCTT...CCCTCTCCCTTGCTTCGCCAAGGCTAGCGAGAAACTCAGTCTTAGCCACACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS CCA 90 bp GAGCGAGACCCTTTTGTCTGCTATCTCTTTCCTTCCAGCGGGTCGTaGGCCTTCTGTGGGAATGCCACGGCCACAACTTGTTTAACTCCT +
Preference number: 5 (lower is better)
Translates to: ERDPFVCYLFPSSGS*AFCGNATATTCLTP
Trigger: AGGAGTTAAACAAGTTGTGGCCGTGGCATTCCCACAGAAGGCCCACGACCCGCTGGAAGGAAAGAGATAGCAGACAAAAGGGTCTCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507467.1
ENST00000507709.1
ENST00000511414.5
CDS CCA 90 bp CCACATGGGGCTTTTGTCTGCTATCTCTTTCCTTCCAGCGGGTCGTaGGCCTTCTGTGGGAATGCCACGGCCACAACTTGTTTAACTCCT +
Preference number: 5 (lower is better)
Translates to: PHGAFVCYLFPSSGS*AFCGNATATTCLTP
Trigger: AGGAGTTAAACAAGTTGTGGCCGTGGCATTCCCACAGAAGGCCCACGACCCGCTGGAAGGAAAGAGATAGCAGACAAAAGCCCCATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515126.1
CDS-3UTR CAA 90 bp TCCCCTAGTATGCCCAGGTCCAGGGCATCTGGCTCCTTCGTGCCATTTTGCTTGGTGGATTCTGGAGGTTaGGCAAATGGGTCAAAGGTC +
Preference number: 5 (lower is better)
Translates to: SPSMPRSRASGSFVPFCLVDSGG*ANGSKV
Trigger: GACCTTTGACCCATTTGCCAAACCTCCAGAATCCAC...CAAGCAAAATGGCACGAAGGAGCCAGATGCCCTGGACCTGGGCATACTAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp CACACCCCGCAAAAAGTCCACTTGGTGAGAGCTGAGAACGAGGGTTCCAGTCTTGCACTGCAGTGGGCTTaGCGCTTGGTTTCATGCTCT +
Preference number: 5 (lower is better)
Translates to: HTPQKVHLVRAENEGSSLALQWA*RLVSCS
Trigger: AGAGCATGAAACCAAGCGCAAAGCCCACTGCAGTGC...AAGACTGGAACCCTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGGGGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CAA 90 bp GTGATTCTTGTTAGGGTCAAACCTTGGAGCAGAACTTTGAACCCTGTAAGTCTGTCTTCCCGCGTGCGTTaGCCTCCTAGCCAGCGCCAG +
Preference number: 5 (lower is better)
Translates to: VILVRVKPWSRTLNPVSLSSRVR*PPSQRQ
Trigger: CTGGCGCTGGCTAGGAGGCAAACGCACGCGGGAAGA...CAGACTTACAGGGTTCAAAGTTCTGCTCCAAGGTTTGACCCTAACAAGAATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CAA 90 bp AGTCTGACTCCTGAGCAGGTGTTCTTGTCCATCCTGTTTGTAACTGCATTGTGGCCAGTGCTGGGGAGTTaGTGGTGGGGAGAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: SLTPEQVFLSILFVTALWPVLGS*WWGEFR
Trigger: CCTGAACTCTCCCCACCACAAACTCCCCAGCACTGG...CCACAATGCAGTTACAAACAGGATGGACAAGAACACCTGCTCAGGAGTCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CAA 90 bp AACGAGGGTTCCAGTCTTTATTATGCGGGCGTTCAGTTTCTAGCTCCCGGGCCGGTGGATTCTGGAGGTTaGGCAAATGGGTCAAAGGTC +
Preference number: 5 (lower is better)
Translates to: NEGSSLYYAGVQFLAPGPVDSGG*ANGSKV
Trigger: GACCTTTGACCCATTTGCCAAACCTCCAGAATCCAC...CGGCCCGGGAGCTAGAAACTGAACGCCCGCATAATAAAGACTGGAACCCTCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
ENST00000537145.2
CDS-3UTR CAA 90 bp GCTCCAGCCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAGTGGATTCTGGAGGTTaGGCAAATGGGTCAAAGGTC +
Preference number: 5 (lower is better)
Translates to: APAPPWSLWILEVWQMGQVDSGG*ANGSKV
Trigger: GACCTTTGACCCATTTGCCAAACCTCCAGAATCCAC...TTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGGCTGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp CCCCTCCTTGGTCTCTGTGGATTCTGGAGGTTTGGCAAATGGGTCAAAGGTCGAACCAACGAGTCAAGGTaGACCAAGGAGGAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: PLLGLCGFWRFGKWVKGRTNESR*TKEEAE
Trigger: CTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGGT...TCGACCTTTGACCCATTTGCCAAACCTCCAGAATCCACAGAGACCAAGGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000510045.5
ENST00000512291.5
ENST00000512379.5
ENST00000537145.2
ENST00000574464.5
CDS-3UTR CAA 90 bp GTGCAGCTGCAGTTTCCTAAACAGCCGGTGATCCACGCTGTGGTCGAGACCCGGTACCTCAGAGAGTCGTaGCAAGCATTAAATAAACTG +
Preference number: 5 (lower is better)
Translates to: VQLQFPKQPVIHAVVETRYLRES*QALNKL
Trigger: CAGTTTATTTAATGCTTGCAACGACTCTCTGAGGTA...CCGGGTCTCGACCACAGCGTGGATCACCGGCTGTTTAGGAAACTGCAGCTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS GCA 90 bp CATCCTTGGGTTCCACATGGGGAATTCAGCAGGCACTTGGAGCTTTaGATGCTCATCTATCTATCTTCACAGCCACACCCCAAAGATGCT +
Preference number: 5 (lower is better)
Translates to: HPWVPHGEFSRHLEL*MLIYLSSQPHPKDA
Trigger: AGCATCTTTGGGGTGTGGCTGTGAAGATAGATAGATGAGCATGCAAAGCTCCAAGTGCCTGCTGAATTCCCCATGTGGAACCCAAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504857.1
CDS-3UTR CAA 90 bp AGTCTGACTCCTGAGCAGGTGTTCTTGTCCATCCTGTTTGTAACTGCATTGTGGCTGTTTGTAACTGCATaGTGGGACTCCCTTCCCCTA +
Preference number: 5 (lower is better)
Translates to: SLTPEQVFLSILFVTALWLFVTA*WDSLPL
Trigger: TAGGGGAAGGGAGTCCCACAATGCAGTTACAAACAG...CCACAATGCAGTTACAAACAGGATGGACAAGAACACCTGCTCAGGAGTCAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS CCA 90 bp TTCAGCGGCACACGTTCTTATTTCACTTACAATTCAGCAGGCACTTaGAGCTTTGCATGCTCATCTATCTATCTTCACAGCCACACCCCA +
Preference number: 5 (lower is better)
Translates to: FSGTRSYFTYNSAGT*SFACSSIYLHSHTP
Trigger: TGGGGTGTGGCTGTGAAGATAGATAGATGAGCATGCAAAGCTCCAAGTGCCTGCTGAATTGTAAGTGAAATAAGAACGTGTGCCGCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510462.5
ENST00000515028.5
CDS-3UTR CAA 90 bp ATTCTTGTTAGGGTCAAACCTTGGAGCAGAACTTTGAACCCTGTAAGTCTGACTACCAACGAGTCAAGGTaGACCAAGGAGGAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: ILVRVKPWSRTLNPVSLTTNESR*TKEEAE
Trigger: CTCAGCTTCCTCCTTGGTCAACCTTGACTCGTTGGT...AGTCAGACTTACAGGGTTCAAAGTTCTGCTCCAAGGTTTGACCCTAACAAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS-3UTR CAA 90 bp ATTCTTGTTAGGGTCAAACCTTGGAGCAGAACTTTGAACCCTGTAAGTCTGACTCCGCAAAAAGTCCACTaGGTGAGAGCTGAGAACGAG +
Preference number: 5 (lower is better)
Translates to: ILVRVKPWSRTLNPVSLTPQKVH*VRAENE
Trigger: CTCGTTCTCAGCTCTCACCAAGTGGACTTTTTGCGG...AGTCAGACTTACAGGGTTCAAAGTTCTGCTCCAAGGTTTGACCCTAACAAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268933.8
CDS GCA 72 bp GGCTCCCTCGGCCCCAGCCCCAGCCCGAGTAGCCTCTaGGGTGACCCTCCGACCTGTGCAGCAGCGGGACGG +
Preference number: 6 (lower is better)
Translates to: GSLGPSPSPSSL*GDPPTCAAAGR
Trigger: CCGTCCCGCTGCTGCACAGGTCGGAGGGTCACCGCAGAGGCTACTCGGGCTGGGGCTGGGGCCGAGGGAGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000268933.8
ENST00000503690.5
ENST00000504857.1
ENST00000510045.5
ENST00000510462.5
ENST00000512379.5
ENST00000515028.5
CDS GCA 72 bp GCCCCTGCACCATTGGCCATGGGGGAGCCATCACCCTaGCAGGACCTCACCTCCTTCTCGTGCTCCTGCCGG +
Preference number: 6 (lower is better)
Translates to: APAPLAMGEPSP*QDLTSFSCSCR
Trigger: CCGGCAGGAGCACGAGAAGGAGGTGAGGTCCTGGCAGGGTGATGGCTCCCCCATGGCCAATGGTGCAGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000537145.2
ENST00000574464.5
CDS GCA 72 bp GCCATGGTCAGGCCACTGGGCAACAGAGCGAGACCCTaGTCCCAGGAGGTGCAGACCCCTCAGAGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: AMVRPLGNRARP*SQEVQTPQRGS
Trigger: GCTGCCCCTCTGAGGGGTCTGCACCTCCTGGGAGCAGGGTCTCGCTCTGTTGCCCAGTGGCCTGACCATGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514874.5
CDS CCA 72 bp TGTTCTTCACCTGGCGCCGGAGTGCGGAGGTCGTCATaGCTGGAGACTTGGAGGTGGGTGGCCCTCGCCCCC +
Preference number: 6 (lower is better)
Translates to: CSSPGAGVRRSS*LETWRWVALAP
Trigger: GGGGGCGAGGGCCACCCACCTCCAAGTCTCCAGCCATGACGACCTCCGCACTCCGGCGCCAGGTGAAGAACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000268933.8
ENST00000503246.1
ENST00000507467.1
ENST00000507998.5
ENST00000510045.5
ENST00000511414.5
ENST00000512291.5
ENST00000512379.5
ENST00000514874.5
ENST00000515126.1
ENST00000537145.2
ENST00000574464.5
CDS CCA 72 bp GGATGGGCTGCCGTGTTAGCAGAGCAGCTGCATCCTTaGGTTCCACATGGGGCTCCAGTGCGGGCTCCCTCG +
Preference number: 6 (lower is better)
Translates to: GWAAVLAEQLHP*VPHGAPVRAPS
Trigger: CGAGGGAGCCCGCACTGGAGCCCCATGTGGAACCCAAGGATGCAGCTGCTCTGCTAACACGGCAGCCCATCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS CCA 72 bp GGATGGGCTGCCGTGTTAGCAGAGCAGCTGCATCCTTaGGTTCCACATGGGGCTGTGCAGCAGCGGGACGGC +
Preference number: 6 (lower is better)
Translates to: GWAAVLAEQLHP*VPHGAVQQRDG
Trigger: GCCGTCCCGCTGCTGCACAGCCCCATGTGGAACCCAAGGATGCAGCTGCTCTGCTAACACGGCAGCCCATCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571402.1
CDS CAA 72 bp GTCCCTGGAATGGGTAGCAGCTCTTCCCGCGTGCGTTaGCCTCCTAGCCAGCGCCAGGCAGCACTCCGAGGA +
Preference number: 6 (lower is better)
Translates to: VPGMGSSSSRVR*PPSQRQAALRG
Trigger: TCCTCGGAGTGCTGCCTGGCGCTGGCTAGGAGGCAAACGCACGCGGGAAGAGCTGCTACCCATTCCAGGGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503246.1
ENST00000503690.5
ENST00000514874.5
CDS CAA 72 bp CCTCCTAGCCAGCGCCAGGCAGCACTCCGAGGAAAGTaGCTCAGCTGGCCCGGCAGGTCTGCCTCAGCAGTA +
Preference number: 6 (lower is better)
Translates to: PPSQRQAALRGK*LSWPGRSASAV
Trigger: TACTGCTGAGGCAGACCTGCCGGGCCAGCTGAGCAACTTTCCTCGGAGTGCTGCCTGGCGCTGGCTAGGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503246.1
CDS CAA 90 bp AGCGGCAGGGTCCCTGGAATGGGTAGCAGCTCTTCCCGCGTGCGTTaGCCTCCTAGCCAGCGCCAGGCAGCACTCCGAGGAAAGTTGCTC +
Preference number: 6 (lower is better)
Translates to: SGRVPGMGSSSSRVR*PPSQRQAALRGKLL
Trigger: GAGCAACTTTCCTCGGAGTGCTGCCTGGCGCTGGCTAGGAGGCAAACGCACGCGGGAAGAGCTGCTACCCATTCCAGGGACCCTGCCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503246.1
CDS GCA 72 bp TCCCTGGAATGGGTAGCAGCTCTTCCCGCGTGCGTTTaGCTCCTAGCCAGCGCCAGGCAGCACTCCGAGGAA +
Preference number: 6 (lower is better)
Translates to: SLEWVAALPACV*LLASARQHSEE
Trigger: TTCCTCGGAGTGCTGCCTGGCGCTGGCTAGGAGGCAAACGCACGCGGGAAGAGCTGCTACCCATTCCAGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503246.1
ENST00000503690.5
ENST00000514874.5
CDS CAA 72 bp AGGATGGGCTGCCGTGTTAGCAGAGCAGCTGCATCCTaGGGTTCCACATGGGGCTCCAGTGCGGGCTCCCTC +
Preference number: 6 (lower is better)
Translates to: RMGCRVSRAAAS*GSTWGSSAGSL
Trigger: GAGGGAGCCCGCACTGGAGCCCCATGTGGAACCCAAGGATGCAGCTGCTCTGCTAACACGGCAGCCCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268933.8
ENST00000510045.5
ENST00000512379.5
CDS CAA 72 bp AGGATGGGCTGCCGTGTTAGCAGAGCAGCTGCATCCTaGGGTTCCACATGGGGCTGTGCAGCAGCGGGACGG +
Preference number: 6 (lower is better)
Translates to: RMGCRVSRAAAS*GSTWGCAAAGR
Trigger: CCGTCCCGCTGCTGCACAGCCCCATGTGGAACCCAAGGATGCAGCTGCTCTGCTAACACGGCAGCCCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571402.1
CDS TCA 72 bp GGAGGGCTGAGGGCCACTGTGGCGAGGTCACAGTCTTaGAGGATGGGCTGCCGTGTTAGCAGAGCAGCTGCA +
Preference number: 6 (lower is better)
Translates to: GGLRATVARSQS*RMGCRVSRAAA
Trigger: TGCAGCTGCTCTGCTAACACGGCAGCCCATCCTTCAAGACTGTGACCTCGCCACAGTGGCCCTCAGCCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000268933.8
ENST00000503246.1
ENST00000503690.5
ENST00000507467.1
ENST00000507998.5
ENST00000510045.5
ENST00000511414.5
ENST00000512291.5
ENST00000512379.5
ENST00000514874.5
ENST00000515126.1
ENST00000537145.2
ENST00000571402.1
ENST00000574464.5
CDS TCA 72 bp CCACTGGGCAACAGAGCGAGACCCTGTAATATTAAGTaGCTCCAGTGCGGGCTCCCTCGGCCCCAGCCCCAG +
Preference number: 6 (lower is better)
Translates to: PLGNRARPCNIK*LQCGLPRPQPQ
Trigger: CTGGGGCTGGGGCCGAGGGAGCCCGCACTGGAGTCACTTAATATTACAGGGTCTCGCTCTGTTGCCCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510462.5
CDS CCA 72 bp GGATGGGCTGCCGTGTTAGCAGAGCAGCTGCATCCTTaGGTTCCACATGGGGCTGCTCCCAGGAGGTGCAGA +
Preference number: 6 (lower is better)
Translates to: GWAAVLAEQLHP*VPHGAAPRRCR
Trigger: TCTGCACCTCCTGGGAGCAGCCCCATGTGGAACCCAAGGATGCAGCTGCTCTGCTAACACGGCAGCCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503246.1
ENST00000512291.5
CDS CAA 72 bp AGGATGGGCTGCCGTGTTAGCAGAGCAGCTGCATCCTaGGGTTCCACATGGGGCTGCTCCCAGGAGGTGCAG +
Preference number: 6 (lower is better)
Translates to: RMGCRVSRAAAS*GSTWGCSQEVQ
Trigger: CTGCACCTCCTGGGAGCAGCCCCATGTGGAACCCAAGGATGCAGCTGCTCTGCTAACACGGCAGCCCATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503246.1
ENST00000512291.5
CDS GCA 72 bp CTTTCCTTCCAGCGGGTCGTGGGCCTTCTGTGGGAATaGCACGGCCACAACTTGTTTAACTCCTGCCCTCCC +
Preference number: 6 (lower is better)
Translates to: LSFQRVVGLLWE*HGHNLFNSCPP
Trigger: GGGAGGGCAGGAGTTAAACAAGTTGTGGCCGTGGCATTCCCACAGAAGGCCCACGACCCGCTGGAAGGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000507467.1
ENST00000507709.1
ENST00000511414.5
ENST00000515126.1
CDS GCA 72 bp AGGCAAGAGGATCACTTGAGGCCAGTAGTTGGAGGCTaGAGTGAGCCATGGTCAGGCCACTGCTCCCAGGAG +
Preference number: 6 (lower is better)
Translates to: RQEDHLRPVVGG*SEPWSGHCSQE
Trigger: CTCCTGGGAGCAGTGGCCTGACCATGGCTCACTGCAGCCTCCAACTACTGGCCTCAAGTGATCCTCTTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507998.5
CDS GCA 72 bp ACTGACCAACTAAATGAGGCCTGGCCAGAGTGTCCCTaGCTCCAGGGACAGCCTTCAGCGGCACACGTTCTT +
Preference number: 6 (lower is better)
Translates to: TDQLNEAWPECP*LQGQPSAAHVL
Trigger: AAGAACGTGTGCCGCTGAAGGCTGTCCCTGGAGGCAGGGACACTCTGGCCAGGCCTCATTTAGTTGGTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515028.5
CDS CAA 72 bp CATGGTCAGGCCACTGGGCAACAGAGCGAGACCCTTTaGTCTGCTATCTCTTTCCTTCCAGCGGGTCGTGGG +
Preference number: 6 (lower is better)
Translates to: HGQATGQQSETL*SAISFLPAGRG
Trigger: CCCACGACCCGCTGGAAGGAAAGAGATAGCAGACAAAAGGGTCTCGCTCTGTTGCCCAGTGGCCTGACCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507467.1
ENST00000507709.1
ENST00000511414.5
CDS CCA 72 bp CTATCTCTTTCCTTCCAGCGGGTCGTGGGCCTTCTGTaGGAATGCCACGGCCACAACTTGTTTAACTCCTGC +
Preference number: 6 (lower is better)
Translates to: LSLSFQRVVGLL*ECHGHNLFNSC
Trigger: GCAGGAGTTAAACAAGTTGTGGCCGTGGCATTCCCACAGAAGGCCCACGACCCGCTGGAAGGAAAGAGATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000507467.1
ENST00000507709.1
ENST00000511414.5
ENST00000515126.1
CDS CCA 72 bp CCTTTTGTCTGCTATCTCTTTCCTTCCAGCGGGTCGTaGGCCTTCTGTGGGAATGCCACGGCCACAACTTGT +
Preference number: 6 (lower is better)
Translates to: PFVCYLFPSSGS*AFCGNATATTC
Trigger: ACAAGTTGTGGCCGTGGCATTCCCACAGAAGGCCCACGACCCGCTGGAAGGAAAGAGATAGCAGACAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507467.1
ENST00000507709.1
ENST00000511414.5
CDS CCA 72 bp GCTTTTGTCTGCTATCTCTTTCCTTCCAGCGGGTCGTaGGCCTTCTGTGGGAATGCCACGGCCACAACTTGT +
Preference number: 6 (lower is better)
Translates to: AFVCYLFPSSGS*AFCGNATATTC
Trigger: ACAAGTTGTGGCCGTGGCATTCCCACAGAAGGCCCACGACCCGCTGGAAGGAAAGAGATAGCAGACAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515126.1
CDS CCA 72 bp GGATGGGCTGCCGTGTTAGCAGAGCAGCTGCATCCTTaGGTTCCACATGGGGCTTTTGTCTGCTATCTCTTT +
Preference number: 6 (lower is better)
Translates to: GWAAVLAEQLHP*VPHGAFVCYLF
Trigger: AAAGAGATAGCAGACAAAAGCCCCATGTGGAACCCAAGGATGCAGCTGCTCTGCTAACACGGCAGCCCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515126.1
CDS CAA 72 bp AGGATGGGCTGCCGTGTTAGCAGAGCAGCTGCATCCTaGGGTTCCACATGGGGCTTTTGTCTGCTATCTCTT +
Preference number: 6 (lower is better)
Translates to: RMGCRVSRAAAS*GSTWGFCLLSL
Trigger: AAGAGATAGCAGACAAAAGCCCCATGTGGAACCCAAGGATGCAGCTGCTCTGCTAACACGGCAGCCCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515126.1
CDS CAA 90 bp GAGCAGCTGCATCCTTGGGTTCCACATGGGGAATTCAGCAGGCACTaGGAGCTTTGCATGCTCATCTATCTATCTTCACAGCCACACCCC +
Preference number: 6 (lower is better)
Translates to: EQLHPWVPHGEFSRH*ELCMLIYLSSQPHP
Trigger: GGGGTGTGGCTGTGAAGATAGATAGATGAGCATGCAAAGCTCCAAGTGCCTGCTGAATTCCCCATGTGGAACCCAAGGATGCAGCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504857.1
CDS CAA 90 bp GCATCCTTGGGTTCCACATGGGGAATTCAGCAGGCACTTGGAGCTTaGCATGCTCATCTATCTATCTTCACAGCCACACCCCAAAGATGC +
Preference number: 6 (lower is better)
Translates to: ASLGSTWGIQQALGA*HAHLSIFTATPQRC
Trigger: GCATCTTTGGGGTGTGGCTGTGAAGATAGATAGATGAGCATGCAAAGCTCCAAGTGCCTGCTGAATTCCCCATGTGGAACCCAAGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504857.1
CDS GCA 72 bp GTTCCACATGGGGAATTCAGCAGGCACTTGGAGCTTTaGATGCTCATCTATCTATCTTCACAGCCACACCCC +
Preference number: 6 (lower is better)
Translates to: VPHGEFSRHLEL*MLIYLSSQPHP
Trigger: GGGGTGTGGCTGTGAAGATAGATAGATGAGCATGCAAAGCTCCAAGTGCCTGCTGAATTCCCCATGTGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504857.1
CDS CCA 72 bp ATCCTTGGGTTCCACATGGGGAATTCAGCAGGCACTTaGAGCTTTGCATGCTCATCTATCTATCTTCACAGC +
Preference number: 6 (lower is better)
Translates to: ILGFHMGNSAGT*SFACSSIYLHS
Trigger: GCTGTGAAGATAGATAGATGAGCATGCAAAGCTCCAAGTGCCTGCTGAATTCCCCATGTGGAACCCAAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504857.1
CDS CAA 72 bp CATCCTTGGGTTCCACATGGGGAATTCAGCAGGCACTaGGAGCTTTGCATGCTCATCTATCTATCTTCACAG +
Preference number: 6 (lower is better)
Translates to: HPWVPHGEFSRH*ELCMLIYLSSQ
Trigger: CTGTGAAGATAGATAGATGAGCATGCAAAGCTCCAAGTGCCTGCTGAATTCCCCATGTGGAACCCAAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504857.1
CDS CAA 90 bp GGAGTAGTTGTGCACGATGTTCTTCACTTACAATTCAGCAGGCACTaGGAGCTTTGCATGCTCATCTATCTATCTTCACAGCCACACCCC +
Preference number: 6 (lower is better)
Translates to: GVVVHDVLHLQFSRH*ELCMLIYLSSQPHP
Trigger: GGGGTGTGGCTGTGAAGATAGATAGATGAGCATGCAAAGCTCCAAGTGCCTGCTGAATTGTAAGTGAAGAACATCGTGCACAACTACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507709.1
CDS CAA 90 bp CTTCAGCGGCACACGTTCTTATTTCACTTACAATTCAGCAGGCACTaGGAGCTTTGCATGCTCATCTATCTATCTTCACAGCCACACCCC +
Preference number: 6 (lower is better)
Translates to: LQRHTFLFHLQFSRH*ELCMLIYLSSQPHP
Trigger: GGGGTGTGGCTGTGAAGATAGATAGATGAGCATGCAAAGCTCCAAGTGCCTGCTGAATTGTAAGTGAAATAAGAACGTGTGCCGCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510462.5
ENST00000515028.5
CDS CAA 90 bp TGTGCACGATGTTCTTCACTTACAATTCAGCAGGCACTTGGAGCTTaGCATGCTCATCTATCTATCTTCACAGCCACACCCCAAAGATGC +
Preference number: 6 (lower is better)
Translates to: CARCSSLTIQQALGA*HAHLSIFTATPQRC
Trigger: GCATCTTTGGGGTGTGGCTGTGAAGATAGATAGATGAGCATGCAAAGCTCCAAGTGCCTGCTGAATTGTAAGTGAAGAACATCGTGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507709.1
CDS GCA 72 bp GTTCTTCACTTACAATTCAGCAGGCACTTGGAGCTTTaGATGCTCATCTATCTATCTTCACAGCCACACCCC +
Preference number: 6 (lower is better)
Translates to: VLHLQFSRHLEL*MLIYLSSQPHP
Trigger: GGGGTGTGGCTGTGAAGATAGATAGATGAGCATGCAAAGCTCCAAGTGCCTGCTGAATTGTAAGTGAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507709.1
CDS CAA 90 bp GCACACGTTCTTATTTCACTTACAATTCAGCAGGCACTTGGAGCTTaGCATGCTCATCTATCTATCTTCACAGCCACACCCCAAAGATGC +
Preference number: 6 (lower is better)
Translates to: AHVLISLTIQQALGA*HAHLSIFTATPQRC
Trigger: GCATCTTTGGGGTGTGGCTGTGAAGATAGATAGATGAGCATGCAAAGCTCCAAGTGCCTGCTGAATTGTAAGTGAAATAAGAACGTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510462.5
ENST00000515028.5
CDS CAA 72 bp TGTTCTTCACTTACAATTCAGCAGGCACTTGGAGCTTaGCATGCTCATCTATCTATCTTCACAGCCACACCC +
Preference number: 6 (lower is better)
Translates to: CSSLTIQQALGA*HAHLSIFTATP
Trigger: GGGTGTGGCTGTGAAGATAGATAGATGAGCATGCAAAGCTCCAAGTGCCTGCTGAATTGTAAGTGAAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507709.1
CDS GCA 72 bp TTATTTCACTTACAATTCAGCAGGCACTTGGAGCTTTaGATGCTCATCTATCTATCTTCACAGCCACACCCC +
Preference number: 6 (lower is better)
Translates to: LFHLQFSRHLEL*MLIYLSSQPHP
Trigger: GGGGTGTGGCTGTGAAGATAGATAGATGAGCATGCAAAGCTCCAAGTGCCTGCTGAATTGTAAGTGAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510462.5
ENST00000515028.5
CDS CAA 72 bp GTGCACGATGTTCTTCACTTACAATTCAGCAGGCACTaGGAGCTTTGCATGCTCATCTATCTATCTTCACAG +
Preference number: 6 (lower is better)
Translates to: VHDVLHLQFSRH*ELCMLIYLSSQ
Trigger: CTGTGAAGATAGATAGATGAGCATGCAAAGCTCCAAGTGCCTGCTGAATTGTAAGTGAAGAACATCGTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507709.1
CDS CAA 72 bp CTTATTTCACTTACAATTCAGCAGGCACTTGGAGCTTaGCATGCTCATCTATCTATCTTCACAGCCACACCC +
Preference number: 6 (lower is better)
Translates to: LISLTIQQALGA*HAHLSIFTATP
Trigger: GGGTGTGGCTGTGAAGATAGATAGATGAGCATGCAAAGCTCCAAGTGCCTGCTGAATTGTAAGTGAAATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510462.5
ENST00000515028.5
CDS CAA 72 bp CACACGTTCTTATTTCACTTACAATTCAGCAGGCACTaGGAGCTTTGCATGCTCATCTATCTATCTTCACAG +
Preference number: 6 (lower is better)
Translates to: HTFLFHLQFSRH*ELCMLIYLSSQ
Trigger: CTGTGAAGATAGATAGATGAGCATGCAAAGCTCCAAGTGCCTGCTGAATTGTAAGTGAAATAAGAACGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510462.5
ENST00000515028.5