RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000072134

Ensembl transcript IDs: ENST00000314728.9, ENST00000347697.6, ENST00000395618.7, ENST00000395620.6, ENST00000395626.5, ENST00000395628.6, ENST00000441293.2, ENST00000494192.6, ENST00000495155.5, ENST00000571254.1, ENST00000572627.6, ENST00000575595.5, ENST00000577244.5, ENST00000577692.5, ENST00000580579.5, ENST00000582234.5, ENST00000582659.5, ENST00000583197.5, ENST00000584150.5, ENST00000584954.1, ENST00000585097.1

Found 755 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCACCCTTCCCCCGGCAGACGAGACCAGCCACCGGCTTACCCAAATaGCAGCGGGAGCCTAAGACCCAGCCGCAGGCCTGCAGTTCTGGC +
Preference number: 1 (lower is better)
Translates to: PPFPRQTRPATGLPK*QREPKTQPQACSSG
Trigger: GCCAGAACTGCAGGCCTGCGGCTGGGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGTGGCTGGTCTCGTCTGCCGGGGGAAGGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR GCA 90 bp CCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTaGTCGGCATCCTCCAGCACAGGTGCTCTGGGTGGGTCCCAGGCC +
Preference number: 1 (lower is better)
Translates to: PNPQTLGSRPTDESP*SASSSTGALGGSQA
Trigger: GGCCTGGGACCCACCCAGAGCACCTGTGCTGGAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
3UTR CCA 90 bp GGCAGAAGGTGGCTGGTCAGGAACTCTAGACACGGCTCCTGGGACTaGAGAGGGCGGCCTCAGGAACAGCATGAGTGGGTGCAGTCCCCA +
Preference number: 1 (lower is better)
Translates to: GRRWLVRNSRHGSWD*RGRPQEQHEWVQSP
Trigger: TGGGGACTGCACCCACTCATGCTGTTCCTGAGGCCGCCCTCTCCAGTCCCAGGAGCCGTGTCTAGAGTTCCTGACCAGCCACCTTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR GCA 90 bp GGCTTACCCAAATGGCAGCGGGAGCCTAAGACCCAGCCGCAGGCCTaGAGTTCTGGCAGAAGGTGGCTGGTCAGGAACTCTAGACACGGC +
Preference number: 1 (lower is better)
Translates to: GLPKWQREPKTQPQA*SSGRRWLVRNSRHG
Trigger: GCCGTGTCTAGAGTTCCTGACCAGCCACCTTCTGCCAGAACTGCAGGCCTGCGGCTGGGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR CCA 90 bp GAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTaGCTTCATGATCAGTGCAGTGGGCAACAGGGACATGCACTCGGG +
Preference number: 1 (lower is better)
Translates to: EGARWHRCNMRGSGR*LHDQCSGQQGHALG
Trigger: CCCGAGTGCATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR TCA 90 bp ACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATaGTCAGTGCAGTGGGCAACAGGGACATGCACTCGGGATGGCCTG +
Preference number: 1 (lower is better)
Translates to: TMAQVQHAWQWPVAS*SVQWATGTCTRDGL
Trigger: CAGGCCATCCCGAGTGCATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR GCA 90 bp CACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTaGAGTGGGCAACAGGGACATGCACTCGGGATGGCCTGTGCCAGA +
Preference number: 1 (lower is better)
Translates to: HRCNMRGSGRWLHDQ*SGQQGHALGMACAR
Trigger: TCTGGCACAGGCCATCCCGAGTGCATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR CCA 90 bp AGTTCTGGCAGAAGGTGGCTGGTCAGGAACTCTAGACACGGCTCCTaGGACTGGAGAGGGCGGCCTCAGGAACAGCATGAGTGGGTGCAG +
Preference number: 1 (lower is better)
Translates to: SSGRRWLVRNSRHGS*DWRGRPQEQHEWVQ
Trigger: CTGCACCCACTCATGCTGTTCCTGAGGCCGCCCTCTCCAGTCCCAGGAGCCGTGTCTAGAGTTCCTGACCAGCCACCTTCTGCCAGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR CCA 90 bp GGCTTCATGATCAGTGCAGTGGGCAACAGGGACATGCACTCGGGATaGCCTGTGCCAGAAGATGGGGCAGGGGGCTGTCTTCTTGGGTCC +
Preference number: 1 (lower is better)
Translates to: GFMISAVGNRDMHSG*PVPEDGAGGCLLGS
Trigger: GGACCCAAGAAGACAGCCCCCTGCCCCATCTTCTGGCACAGGCCATCCCGAGTGCATGTCCCTGTTGCCCACTGCACTGATCATGAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR GCA 90 bp CGGCCTCAGGAACAGCATGAGTGGGTGCAGTCCCCACTCAGAGCCTaGATGTCCCAGCAGCCCAGAGACCATTTAAGATCTCTCCTGTGC +
Preference number: 1 (lower is better)
Translates to: RPQEQHEWVQSPLRA*MSQQPRDHLRSLLC
Trigger: GCACAGGAGAGATCTTAAATGGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTCATGCTGTTCCTGAGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR CCA 90 bp CCGGTGCGAAGGGTAATCTTCTGGAACCAGAGAGGGGCTGGCAGGTaGTCAGCTGCCCTTAGAGCTAGAGGTGAGAAATTCCCATGGTGG +
Preference number: 1 (lower is better)
Translates to: PVRRVIFWNQRGAGR*SAALRARGEKFPWW
Trigger: CCACCATGGGAATTTCTCACCTCTAGCTCTAAGGGCAGCTGACCACCTGCCAGCCCCTCTCTGGTTCCAGAAGATTACCCTTCGCACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR CCA 90 bp AGGTGGTCAGCTGCCCTTAGAGCTAGAGGTGAGAAATTCCCATGGTaGAAAAAGGGCCAGAAACATCCACCAGGCAAGCTGCCCAGACAC +
Preference number: 1 (lower is better)
Translates to: RWSAALRARGEKFPW*KKGQKHPPGKLPRH
Trigger: GTGTCTGGGCAGCTTGCCTGGTGGATGTTTCTGGCCCTTTTTCCACCATGGGAATTTCTCACCTCTAGCTCTAAGGGCAGCTGACCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR-3UTR CCA 90 bp CGTCCAAGGCCTCAGAGGAGCCCTGCCAGGACCTCAGTGCTTTGGAGGAGGTGGCCAGCACAGGTGCTCTaGGTGGGTCCCAGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: RPRPQRSPARTSVLWRRWPAQVL*VGPRPR
Trigger: CCTGGGCCTGGGACCCACCCAGAGCACCTGTGCTGG...CCACCTCCTCCAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGCCTTGGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
3UTR-3UTR CCA 90 bp CCACGTCCTCGTCCAAGGCCTCAGAGGAGCCCTGCCAGGACCTCAGTGCTTTGGCCAGCACAGGTGCTCTaGGTGGGTCCCAGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: PRPRPRPQRSPARTSVLWPAQVL*VGPRPR
Trigger: CCTGGGCCTGGGACCCACCCAGAGCACCTGTGCTGG...CCAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGCCTTGGACGAGGACGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
3UTR-3UTR CCA 90 bp CCCCACCCTTCCCCCGGCAGACGAGACCAGCCACCGGCTTACCCAAATGGCAGCTCTAGACACGGCTCCTaGGACTGGAGAGGGCGGCCT +
Preference number: 2 (lower is better)
Translates to: PHPSPGRRDQPPAYPNGSSRHGS*DWRGRP
Trigger: AGGCCGCCCTCTCCAGTCCCAGGAGCCGTGTCTAGA...GCTGCCATTTGGGTAAGCCGGTGGCTGGTCTCGTCTGCCGGGGGAAGGGTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR-3UTR CCA 90 bp AGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCCACGGCTCCTGGGACTaGAGAGGGCGGCCTCAGGAA +
Preference number: 2 (lower is better)
Translates to: RREHDGTGATCVAVAGGFHGSWD*RGRPQE
Trigger: TTCCTGAGGCCGCCCTCTCCAGTCCCAGGAGCCGTG...GAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR-3UTR CCA 90 bp CCACCGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTGCCGAACCAGAGAGGGGCTaGCAGGTGGTCAGCTGCCCT +
Preference number: 2 (lower is better)
Translates to: PPASGTEKQLGDFLHHGAEPERG*QVVSCP
Trigger: AGGGCAGCTGACCACCTGCCAGCCCCTCTCTGGTTC...GGCACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR-3UTR CCA 90 bp CCACCGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTGCCTCTAGACACGGCTCCTaGGACTGGAGAGGGCGGCCT +
Preference number: 2 (lower is better)
Translates to: PPASGTEKQLGDFLHHGASRHGS*DWRGRP
Trigger: AGGCCGCCCTCTCCAGTCCCAGGAGCCGTGTCTAGA...GGCACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR-3UTR CCA 90 bp TGGAGGCAGCTGGCTTGGTACCAAACGATGGCCAGGGGTCTGAAGTACTCGCAGCAGGGCTCTGCTTTCTaGGCCGCGGGGCCCGAGCTG +
Preference number: 2 (lower is better)
Translates to: WRQLAWYQTMARGLKYSQQGSAF*AAGPEL
Trigger: CAGCTCGGGCCCCGCGGCCCAGAAAGCAGAGCCCTG...CTGCGAGTACTTCAGACCCCTGGCCATCGTTTGGTACCAAGCCAGCTGCCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580579.5
3UTR-3UTR TCA 90 bp TGGAGGCAGCTGGCTTGGTACCAAACGATGGCCAGGGGTCTGAAGTACTCGCAGCTGGTTAGTGGAGGCTaGCGGGCCCCAGGGCTCTGC +
Preference number: 2 (lower is better)
Translates to: WRQLAWYQTMARGLKYSQLVSGG*RAPGLC
Trigger: GCAGAGCCCTGGGGCCCGTCAGCCTCCACTAACCAG...CTGCGAGTACTTCAGACCCCTGGCCATCGTTTGGTACCAAGCCAGCTGCCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580579.5
3UTR-3UTR GCA 90 bp CCTCCACCACGGTGCCCATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGGCCTCAGAGGAGCCCTaGCAGGACCTCAGTGCTTTG +
Preference number: 2 (lower is better)
Translates to: PPPRCPSGGSTMAQVQHAASEEP*QDLSAL
Trigger: CAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGC...CGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGATGGGCACCGTGGTGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
3UTR-3UTR GCA 90 bp CCCCACCCTTCCCCCGGCAGACGAGACCAGCCACCGGCTTACCCAAATGGCAGCCGCCCTCGGGACAACTaGCATTTCCACATTATCCCC +
Preference number: 2 (lower is better)
Translates to: PHPSPGRRDQPPAYPNGSRPRDN*HFHIIP
Trigger: GGGGATAATGTGGAAATGGCAGTTGTCCCGAGGGCG...GCTGCCATTTGGGTAAGCCGGTGGCTGGTCTCGTCTGCCGGGGGAAGGGTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR-3UTR CCA 90 bp AGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCAGAGGGGCTGGCAGGTaGTCAGCTGCCCTTAGAGCT +
Preference number: 2 (lower is better)
Translates to: RREHDGTGATCVAVAGGFRGAGR*SAALRA
Trigger: AGCTCTAAGGGCAGCTGACCACCTGCCAGCCCCTCT...GAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR-3UTR GCA 90 bp AGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCACAGACGAGAGTCCCTaGTCGGCATCCTCCAGCACA +
Preference number: 2 (lower is better)
Translates to: RREHDGTGATCVAVAGGFTDESP*SASSST
Trigger: TGTGCTGGAGGATGCCGAGCAGGGACTCTCGTCTGT...GAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
3UTR-3UTR GCA 90 bp CCACCGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTGCCACAGACGAGAGTCCCTaGTCGGCATCCTCCAGCACA +
Preference number: 2 (lower is better)
Translates to: PPASGTEKQLGDFLHHGATDESP*SASSST
Trigger: TGTGCTGGAGGATGCCGAGCAGGGACTCTCGTCTGT...GGCACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
3UTR-3UTR CCA 90 bp AGGGTAATCTTCTGGAACCAGAGAGGGGCTGGCAGGTGGTCAGCTGCCCTTAGACCAGCACAGGTGCTCTaGGTGGGTCCCAGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: RVIFWNQRGAGRWSAALRPAQVL*VGPRPR
Trigger: CCTGGGCCTGGGACCCACCCAGAGCACCTGTGCTGG...TCTAAGGGCAGCTGACCACCTGCCAGCCCCTCTCTGGTTCCAGAAGATTACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
3UTR-3UTR CCA 90 bp TGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTAGGGGGCTGTCTTCTTaGGTCCCGGTGGCCCAGTGG +
Preference number: 2 (lower is better)
Translates to: WHRCNMRGSGRWLHDQCSRGLSS*VPVAQW
Trigger: CCACTGGGCCACCGGGACCCAAGAAGACAGCCCCCT...ACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR-3UTR GCA 90 bp AGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAAATCCTCCAGCACAGGTaGTCTGGGTGGGTCCCAGGC +
Preference number: 2 (lower is better)
Translates to: RCNMRGSGRWLHDQCSGQILQHR*SGWVPG
Trigger: GCCTGGGACCCACCCAGAGCACCTGTGCTGGAGGAT...TTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
3UTR-3UTR GCA 90 bp GTGGGGAGGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCGCCTCAGAGGAGCCCTaGCAGGACCTCAGTGCTTTG +
Preference number: 2 (lower is better)
Translates to: VGRTKTRPLSQVLGQATSASEEP*QDLSAL
Trigger: CAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGC...GGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
3UTR-3UTR GCA 90 bp AGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCGTCTTATGGAGCCGGTaGTTCATCGTGTCCACACCC +
Preference number: 2 (lower is better)
Translates to: RREHDGTGATCVAVAGGFVLWSR*FIVSTP
Trigger: GGGTGTGGACACGATGAAGCACCGGCTCCATAAGAC...GAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
3UTR-3UTR CCA 90 bp ATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCCGAGGGTCTGAGGGTTaGGGCTGTAAAGACAGCCCT +
Preference number: 2 (lower is better)
Translates to: MSGCSPHSEPACPSSPETRGSEG*GCKDSP
Trigger: AGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCG...GGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
3UTR-3UTR CCA 90 bp ATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCCACTGTCCCAAGTCCTaGGCCAGGCAACATCCTGGA +
Preference number: 2 (lower is better)
Translates to: MSGCSPHSEPACPSSPETHCPKS*ARQHPG
Trigger: TCCAGGATGTTGCCTGGCCCAGGACTTGGGACAGTG...GGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
3UTR-3UTR CCA 90 bp GCCCAGGCCCTGCACCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCACCGGCTTACCCAAATaGCAGCGGGAGCCTAAGACC +
Preference number: 2 (lower is better)
Translates to: AQALHRLKESTFLGKHPATGLPK*QREPKT
Trigger: GGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGT...GGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGTGCAGGGCCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR-3UTR GCA 90 bp GTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAACAGGGACATGCACCTGCCAGGACCTCAGTaGTTTGGAGGAGGTGGTGAG +
Preference number: 2 (lower is better)
Translates to: VAVAGGFMISAVGNRDMHLPGPQ*FGGGGE
Trigger: CTCACCACCTCCTCCAAAGCACTGAGGTCCTGGCAG...GTGCATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
3UTR-3UTR GCA 90 bp CCAGGCAAGCTGCCCAGACACAGGATTGGGGGAATGTCCCCTCCCTGGGTAAAAGCCTCAGAGGAGCCCTaGCAGGACCTCAGTGCTTTG +
Preference number: 2 (lower is better)
Translates to: PGKLPRHRIGGMSPPWVKASEEP*QDLSAL
Trigger: CAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGC...TTTTACCCAGGGAGGGGACATTCCCCCAATCCTGTGTCTGGGCAGCTTGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
3UTR-3UTR CCA 90 bp CTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTCCAGCACAGGTGCTCTaGGTGGGTCCCAGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: LIPLIPKLLDPVPQTRVPPAQVL*VGPRPR
Trigger: CCTGGGCCTGGGACCCACCCAGAGCACCTGTGCTGG...AGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
3UTR-3UTR CCA 90 bp GGGATGGCCTGTGCCAGAAGATGGGGCAGGGGGCTGTCTTCTTGGGTCCCGGTGCCAAAAGGTGTCTTATaGAGCCGGTGCTTCATCGTG +
Preference number: 2 (lower is better)
Translates to: GMACARRWGRGLSSWVPVPKGVL*SRCFIV
Trigger: CACGATGAAGCACCGGCTCCATAAGACACCTTTTGG...CACCGGGACCCAAGAAGACAGCCCCCTGCCCCATCTTCTGGCACAGGCCATCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
3UTR-3UTR GCA 90 bp TATCTGGAGTTAGCAGGTAGGTGGATCAGGGCCAGCCCTGGTCCCTTAGCCCCCGTCTTATGGAGCCGGTaGTTCATCGTGTCCACACCC +
Preference number: 2 (lower is better)
Translates to: YLELAGRWIRASPGPLAPVLWSR*FIVSTP
Trigger: GGGTGTGGACACGATGAAGCACCGGCTCCATAAGAC...GGGGGCTAAGGGACCAGGGCTGGCCCTGATCCACCTACCTGCTAACTCCAGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
3UTR-3UTR CCA 90 bp CAGGAACAGCATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCGAAGGGTAATCTTCTaGAACCAGAGAGGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: QEQHEWVQSPLRACMSQQRRVIF*NQRGAG
Trigger: GCCAGCCCCTCTCTGGTTCCAGAAGATTACCCTTCG...CTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTCATGCTGTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR-3UTR GCA 90 bp ACCACTTCCCCAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCCTGCCAGGACCTCAGTaGTTTGGAGGAGGTGGTGAG +
Preference number: 2 (lower is better)
Translates to: TTSPKGVLWSRCFIVSTPLPGPQ*FGGGGE
Trigger: CTCACCACCTCCTCCAAAGCACTGAGGTCCTGGCAG...GGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTGGGGAAGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
3UTR-3UTR CCA 90 bp ACCACTTCCCCAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCCGAGGGTCTGAGGGTTaGGGCTGTAAAGACAGCCCT +
Preference number: 2 (lower is better)
Translates to: TTSPKGVLWSRCFIVSTPRGSEG*GCKDSP
Trigger: AGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCG...GGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTGGGGAAGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
3UTR-3UTR CCA 90 bp CAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCAGGACTGCCTCACTGTCCCAAGTCCTaGGCCAGGCAACATCCTGGA +
Preference number: 2 (lower is better)
Translates to: QKVSYGAGASSCPHPGLPHCPKS*ARQHPG
Trigger: TCCAGGATGTTGCCTGGCCCAGGACTTGGGACAGTG...AGGCAGTCCTGGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
3UTR-3UTR TCA 90 bp TGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTTTTTACAGTGGTGGGTaGGGTGAGGACAGTAGGAGT +
Preference number: 2 (lower is better)
Translates to: WHRCNMRGSGRWLHDQCSFYSGG*GEDSRS
Trigger: ACTCCTACTGTCCTCACCTCACCCACCACTGTAAAA...ACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR-3UTR CCA 90 bp CCTGTGCCAGAAGATGGGGCAGGGGGCTGTCTTCTTGGGTCCCGGTGGCCCAGTAAAGCAAGTCTTTTCTaGTCTTTAATGCACGACGTA +
Preference number: 2 (lower is better)
Translates to: PVPEDGAGGCLLGSRWPSKASLF*SLMHDV
Trigger: TACGTCGTGCATTAAAGACCAGAAAAGACTTGCTTT...ACTGGGCCACCGGGACCCAAGAAGACAGCCCCCTGCCCCATCTTCTGGCACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR-3UTR TCA 90 bp AGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCCTCAAAGTCACATCATaGAAGACTCGTTACAAAAGA +
Preference number: 2 (lower is better)
Translates to: RREHDGTGATCVAVAGGFLKVTS*KTRYKR
Trigger: TCTTTTGTAACGAGTCTTTCATGATGTGACTTTGAG...GAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR-3UTR CCA 90 bp AATTCAAGAGTTGTCCACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAACCAGCACAGGTGCTCTaGGTGGGTCCCAGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: NSRVVHGGGVYFELTRVKPAQVL*VGPRPR
Trigger: CCTGGGCCTGGGACCCACCCAGAGCACCTGTGCTGG...TTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGTGGACAACTCTTGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
3UTR-3UTR TCA 90 bp AGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAATGGTGGTGTTTACTTTaGACTCACACGAGTCAAAGA +
Preference number: 2 (lower is better)
Translates to: RCNMRGSGRWLHDQCSGQWWCLL*THTSQR
Trigger: TCTTTGACTCGTGTGAGTTCAAAGTAAACACCACCA...TTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
3UTR-3UTR TCA 90 bp CAGGAACAGCATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGTTTAAACCACTAAAATaGCACGTGCCAACATCTTCA +
Preference number: 2 (lower is better)
Translates to: QEQHEWVQSPLRACMSQQFKPLK*HVPTSS
Trigger: TGAAGATGTTGGCACGTGTCATTTTAGTGGTTTAAA...CTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTCATGCTGTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
3UTR-3UTR CCA 90 bp TGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTAGGACAGTAGGAGTTTaGAAGAGGGAGGTAATATTA +
Preference number: 2 (lower is better)
Translates to: WHRCNMRGSGRWLHDQCSRTVGV*KREVIL
Trigger: TAATATTACCTCCCTCTTCCAAACTCCTACTGTCCT...ACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR-3UTR TCA 90 bp CTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCCATCCCATTGCACCTTGGTGGTGTTTACTTTaGACTCACACGAGTCAAAGA +
Preference number: 2 (lower is better)
Translates to: LKESTFLGKHPASHPIAPWWCLL*THTSQR
Trigger: TCTTTGACTCGTGTGAGTTCAAAGTAAACACCACCA...AGGTGCAATGGGATGGGAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
3UTR-3UTR GCA 90 bp ACACGTGCCAACATCTTCATTCAGCCAGACCTGGTAAATTCTATCAAAACTAGAATCCTCCAGCACAGGTaGTCTGGGTGGGTCCCAGGC +
Preference number: 2 (lower is better)
Translates to: TRANIFIQPDLVNSIKTRILQHR*SGWVPG
Trigger: GCCTGGGACCCACCCAGAGCACCTGTGCTGGAGGAT...TCTAGTTTTGATAGAATTTACCAGGTCTGGCTGAATGAAGATGTTGGCACGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
3UTR-3UTR GCA 90 bp ATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACGGTGGTATCCTCCAGCACAGGTaGTCTGGGTGGGTCCCAGGC +
Preference number: 2 (lower is better)
Translates to: ISFKARSSGFNSRVVHGGILQHR*SGWVPG
Trigger: GCCTGGGACCCACCCAGAGCACCTGTGCTGGAGGAT...ACCACCGTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
3UTR-3UTR GCA 90 bp GCTCAGATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACCTGCCAGGACCTCAGTaGTTTGGAGGAGGTGGTGAG +
Preference number: 2 (lower is better)
Translates to: AQISFKARSSGFNSRVVHLPGPQ*FGGGGE
Trigger: CTCACCACCTCCTCCAAAGCACTGAGGTCCTGGCAG...GTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAATCTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
3UTR-3UTR GCA 90 bp ACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAAGAAAAATAAAATATGCGCCTCAGAGGAGCCCTaGCAGGACCTCAGTGCTTTG +
Preference number: 2 (lower is better)
Translates to: TVVVFTLNSHESKKNKICASEEP*QDLSAL
Trigger: CAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGC...GCATATTTTATTTTTCTTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
3UTR-3UTR CCA 90 bp GCTCAGATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACCGAGGGTCTGAGGGTTaGGGCTGTAAAGACAGCCCT +
Preference number: 2 (lower is better)
Translates to: AQISFKARSSGFNSRVVHRGSEG*GCKDSP
Trigger: AGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCG...GTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAATCTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
3UTR-3UTR CCA 90 bp GAGGACAGTAGGAGTTTGGAAGAGGGAGGTAATATTAGTGCATGTTTGTTAAAAGAGTTAGCAGGTAGGTaGATCAGGGCCAGCCCTGGT +
Preference number: 2 (lower is better)
Translates to: EDSRSLEEGGNISACLLKELAGR*IRASPG
Trigger: ACCAGGGCTGGCCCTGATCCACCTACCTGCTAACTC...TTTTAACAAACATGCACTAATATTACCTCCCTCTTCCAAACTCCTACTGTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR-3UTR CCA 90 bp AATTCAAGAGTTGTCCACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAACCAAAAGGTGTCTTATaGAGCCGGTGCTTCATCGTG +
Preference number: 2 (lower is better)
Translates to: NSRVVHGGGVYFELTRVKPKGVL*SRCFIV
Trigger: CACGATGAAGCACCGGCTCCATAAGACACCTTTTGG...TTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGTGGACAACTCTTGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
3UTR-3UTR GCA 90 bp ACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAAGAAAAATAAAATATGCGTCTTATGGAGCCGGTaGTTCATCGTGTCCACACCC +
Preference number: 2 (lower is better)
Translates to: TVVVFTLNSHESKKNKICVLWSR*FIVSTP
Trigger: GGGTGTGGACACGATGAAGCACCGGCTCCATAAGAC...GCATATTTTATTTTTCTTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
3UTR-3UTR CCA 90 bp ATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACGGTGGTCCAAAAGGTGTCTTATaGAGCCGGTGCTTCATCGTG +
Preference number: 2 (lower is better)
Translates to: ISFKARSSGFNSRVVHGGPKGVL*SRCFIV
Trigger: CACGATGAAGCACCGGCTCCATAAGACACCTTTTGG...ACCACCGTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
3UTR CAA 90 bp CTCAGATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTaGTCCACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAAG +
Preference number: 2 (lower is better)
Translates to: LRLVLKLALVDLIQE*STVVVFTLNSHESK
Trigger: CTTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAATCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
3UTR-3UTR TCA 90 bp TCAGGATGTTGGTATATTCGTAAGAAAAATAGCCTCTCAGGATCTAGCCAAAAATTTAAACCACTAAAATaGCACGTGCCAACATCTTCA +
Preference number: 2 (lower is better)
Translates to: SGCWYIRKKNSLSGSSQKFKPLK*HVPTSS
Trigger: TGAAGATGTTGGCACGTGTCATTTTAGTGGTTTAAA...TTTTTGGCTAGATCCTGAGAGGCTATTTTTCTTACGAATATACCAACATCCTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
3UTR CCA 72 bp CCCCGGCAGACGAGACCAGCCACCGGCTTACCCAAATaGCAGCGGGAGCCTAAGACCCAGCCGCAGGCCTGC +
Preference number: 3 (lower is better)
Translates to: PRQTRPATGLPK*QREPKTQPQAC
Trigger: GCAGGCCTGCGGCTGGGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGTGGCTGGTCTCGTCTGCCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR CCA 72 bp TGGGACTGGAGAGGGCGGCCTCAGGAACAGCATGAGTaGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAG +
Preference number: 3 (lower is better)
Translates to: WDWRGRPQEQHE*VQSPLRACMSQ
Trigger: CTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTCATGCTGTTCCTGAGGCCGCCCTCTCCAGTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR-3UTR CAA 90 bp AGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCTGCCCAGACACAGGATaGGGGGAATGTCCCCTCCCT +
Preference number: 3 (lower is better)
Translates to: RREHDGTGATCVAVAGGFCPDTG*GECPLP
Trigger: AGGGAGGGGACATTCCCCCAATCCTGTGTCTGGGCA...GAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR-3UTR CAA 90 bp AGGCAGCTGGCTTGGTACCAAACGATGGCCAGGGGTCTGAAGTACTCGCAGGAGGGCCCGCCCCAGGGGTaGGTCTGGTTAGTGGAGGCT +
Preference number: 3 (lower is better)
Translates to: RQLAWYQTMARGLKYSQEGPPQG*VWLVEA
Trigger: AGCCTCCACTAACCAGACCAACCCCTGGGGCGGGCC...CTCCTGCGAGTACTTCAGACCCCTGGCCATCGTTTGGTACCAAGCCAGCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580579.5
3UTR GCA 72 bp CAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTaGTCGGCATCCTCCAGCACAGGTGCTCTGGGTGGG +
Preference number: 3 (lower is better)
Translates to: QTLGSRPTDESP*SASSSTGALGG
Trigger: CCCACCCAGAGCACCTGTGCTGGAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
3UTR GCA 72 bp CACGGTGCCCATCAGGAGGGAGCACGATGGCACAGGTaGAACATGCGTGGCAGTGGCCGGTGGCTTCATGAT +
Preference number: 3 (lower is better)
Translates to: HGAHQEGARWHR*NMRGSGRWLHD
Trigger: ATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGATGGGCACCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR CCA 72 bp TGGCTGGTCAGGAACTCTAGACACGGCTCCTGGGACTaGAGAGGGCGGCCTCAGGAACAGCATGAGTGGGTG +
Preference number: 3 (lower is better)
Translates to: WLVRNSRHGSWD*RGRPQEQHEWV
Trigger: CACCCACTCATGCTGTTCCTGAGGCCGCCCTCTCCAGTCCCAGGAGCCGTGTCTAGAGTTCCTGACCAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR-3UTR CAA 90 bp CGGTGCCCATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCTAATCCCCAAACTCTaGGATCCCGTCCCACAGACG +
Preference number: 3 (lower is better)
Translates to: RCPSGGSTMAQVQHAWQWLIPKL*DPVPQT
Trigger: CGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAG...CCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGATGGGCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
3UTR TCA 72 bp CAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATaGTCAGTGCAGTGGGCAACAGGGACATGCACTCGG +
Preference number: 3 (lower is better)
Translates to: QVQHAWQWPVAS*SVQWATGTCTR
Trigger: CCGAGTGCATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR GCA 72 bp AAATGGCAGCGGGAGCCTAAGACCCAGCCGCAGGCCTaGAGTTCTGGCAGAAGGTGGCTGGTCAGGAACTCT +
Preference number: 3 (lower is better)
Translates to: KWQREPKTQPQA*SSGRRWLVRNS
Trigger: AGAGTTCCTGACCAGCCACCTTCTGCCAGAACTGCAGGCCTGCGGCTGGGTCTTAGGCTCCCGCTGCCATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR GCA 72 bp AACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTaGAGTGGGCAACAGGGACATGCACTCGGGATGGCC +
Preference number: 3 (lower is better)
Translates to: NMRGSGRWLHDQ*SGQQGHALGMA
Trigger: GGCCATCCCGAGTGCATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR CCA 72 bp AGAAGGTGGCTGGTCAGGAACTCTAGACACGGCTCCTaGGACTGGAGAGGGCGGCCTCAGGAACAGCATGAG +
Preference number: 3 (lower is better)
Translates to: RRWLVRNSRHGS*DWRGRPQEQHE
Trigger: CTCATGCTGTTCCTGAGGCCGCCCTCTCCAGTCCCAGGAGCCGTGTCTAGAGTTCCTGACCAGCCACCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR CCA 72 bp ATCAGTGCAGTGGGCAACAGGGACATGCACTCGGGATaGCCTGTGCCAGAAGATGGGGCAGGGGGCTGTCTT +
Preference number: 3 (lower is better)
Translates to: ISAVGNRDMHSG*PVPEDGAGGCL
Trigger: AAGACAGCCCCCTGCCCCATCTTCTGGCACAGGCCATCCCGAGTGCATGTCCCTGTTGCCCACTGCACTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR CCA 72 bp AAAACCAGCCACCGGCCTCTGGGACTGAGAAACAGCTaGGTGACTTCCTCCACCACGGTGCCCATCAGGAGG +
Preference number: 3 (lower is better)
Translates to: KTSHRPLGLRNS*VTSSTTVPIRR
Trigger: CCTCCTGATGGGCACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGGTGGCTGGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR-3UTR CAA 90 bp TGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTTGCCCAGACACAGGATaGGGGGAATGTCCCCTCCCT +
Preference number: 3 (lower is better)
Translates to: WHRCNMRGSGRWLHDQCSCPDTG*GECPLP
Trigger: AGGGAGGGGACATTCCCCCAATCCTGTGTCTGGGCA...ACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR CCA 72 bp AAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCTTCTaGAACCAGAGAGGGGCTGGCAGGTGGTCAGCTGCC +
Preference number: 3 (lower is better)
Translates to: KISPVPVRRVIF*NQRGAGRWSAA
Trigger: GGCAGCTGACCACCTGCCAGCCCCTCTCTGGTTCCAGAAGATTACCCTTCGCACCGGCACAGGAGAGATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR CCA 72 bp CGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTaGCTTCATGATCAGTGCAGTGGGCAACAGGGACAT +
Preference number: 3 (lower is better)
Translates to: RWHRCNMRGSGR*LHDQCSGQQGH
Trigger: ATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR-3UTR CAA 90 bp GGGGAGGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCTGCTAATCCCCAAACTCTaGGATCCCGTCCCACAGACG +
Preference number: 3 (lower is better)
Translates to: GEDKDKATVPSPGPGNILLIPKL*DPVPQT
Trigger: CGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAG...CAGGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
3UTR-3UTR CAA 90 bp TCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTAAGCATAGAGCCACGTaGGGGGTTATGCTCAGATTA +
Preference number: 3 (lower is better)
Translates to: SGGSTMAQVQHAWQWPVAKHRAT*GVMLRL
Trigger: TAATCTGAGCATAACCCCCAACGTGGCTCTATGCTT...AGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
3UTR-3UTR CAA 90 bp ACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCCAGCCGCAGGCCTGCAGTGTGGTGGTGTTTACTTaGAACTCACACGAGTCAAAG +
Preference number: 3 (lower is better)
Translates to: TGLPKWQREPKTQPQACSVVVFT*NSHESK
Trigger: CTTTGACTCGTGTGAGTTCAAAGTAAACACCACCAC...ACTGCAGGCCTGCGGCTGGGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
3UTR-3UTR CAA 90 bp CCCCACCCTTCCCCCGGCAGACGAGACCAGCCACCGGCTTACCCAAATGGCAGCAATATTAGTGCATGTTaGTTAAAAATCCCTCCCAGG +
Preference number: 3 (lower is better)
Translates to: PHPSPGRRDQPPAYPNGSNISAC*LKIPPR
Trigger: CCTGGGAGGGATTTTTAACAAACATGCACTAATATT...GCTGCCATTTGGGTAAGCCGGTGGCTGGTCTCGTCTGCCGGGGGAAGGGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR CCA 72 bp AGGGTAATCTTCTGGAACCAGAGAGGGGCTGGCAGGTaGTCAGCTGCCCTTAGAGCTAGAGGTGAGAAATTC +
Preference number: 3 (lower is better)
Translates to: RVIFWNQRGAGR*SAALRARGEKF
Trigger: GAATTTCTCACCTCTAGCTCTAAGGGCAGCTGACCACCTGCCAGCCCCTCTCTGGTTCCAGAAGATTACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR-3UTR CAA 90 bp GCCCAGGCCCTGCACCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCAATATTAGTGCATGTTaGTTAAAAATCCCTCCCAGG +
Preference number: 3 (lower is better)
Translates to: AQALHRLKESTFLGKHPANISAC*LKIPPR
Trigger: CCTGGGAGGGATTTTTAACAAACATGCACTAATATT...GGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGTGCAGGGCCTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR-3UTR CAA 90 bp GCTCAGATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACCTAATCCCCAAACTCTaGGATCCCGTCCCACAGACG +
Preference number: 3 (lower is better)
Translates to: AQISFKARSSGFNSRVVHLIPKL*DPVPQT
Trigger: CGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAG...GTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAATCTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
3UTR TCA 72 bp AGTCACATCATGAAAGACTCGTTACAAAAGAATCACTaGCCCCAAGTAGTCGAGTCTAGTCTACTGACCTGT +
Preference number: 3 (lower is better)
Translates to: SHIMKDSLQKNH*PQVVESSLLTC
Trigger: ACAGGTCAGTAGACTAGACTCGACTACTTGGGGTCAGTGATTCTTTTGTAACGAGTCTTTCATGATGTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
3UTR-3UTR CAA 90 bp GAGGACAGTAGGAGTTTGGAAGAGGGAGGTAATATTAGTGCATGTTTGTTAAAAGTGGTGGTGTTTACTTaGAACTCACACGAGTCAAAG +
Preference number: 3 (lower is better)
Translates to: EDSRSLEEGGNISACLLKVVVFT*NSHESK
Trigger: CTTTGACTCGTGTGAGTTCAAAGTAAACACCACCAC...TTTTAACAAACATGCACTAATATTACCTCCCTCTTCCAAACTCCTACTGTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp CCTCCACCACGGTGCCCATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGGCCCCTGTGCGGTGCTaGGGGCACAGCGAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: PPPRCPSGGSTMAQVQHAAPVRC*GHSEAS
Trigger: TGAGGCCTCGCTGTGCCCCCAGCACCGCACAGGGGC...CGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGATGGGCACCGTGGTGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000395626.5
CDS-3UTR GCA 90 bp GGGATGGCCTGTGCCAGAAGATGGGGCAGGGGGCTGTCTTCTTGGGTCCCGGTGGTCTGGGGCCGGGCTTaGTCCAGCTCGGAGGACACT +
Preference number: 4 (lower is better)
Translates to: GMACARRWGRGLSSWVPVVWGRA*SSSEDT
Trigger: AGTGTCCTCCGAGCTGGAGCAAGCCCGGCCCCAGAC...CACCGGGACCCAAGAAGACAGCCCCCTGCCCCATCTTCTGGCACAGGCCATCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp TTGGTACCAAACGATGGCCAGGGGTCTGAAGTACTCGCAGGAGCCGCTGGCCCGACTCGCAGGAGCCGCTaGCCCGCCCCAGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: LVPNDGQGSEVLAGAAGPTRRSR*PAPGVG
Trigger: ACCAACCCCTGGGGCGGGCCAGCGGCTCCTGCGAGT...CGGGCCAGCGGCTCCTGCGAGTACTTCAGACCCCTGGCCATCGTTTGGTACCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580579.5
CDS-3UTR CCA 90 bp TCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTCCAGCACAGGTGCTCTaGGTGGGTCCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SGGSTMAQVQHAWQWPVAPAQVL*VGPRPR
Trigger: CCTGGGCCTGGGACCCACCCAGAGCACCTGTGCTGG...AGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR TCA 90 bp ATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCTGCAGCTCCTCACTCTaGCCCAGCGGGGCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: MSGCSPHSEPACPSSPETCSSSL*PSGAPV
Trigger: CACAGGGGCCCCGCTGGGTCAGAGTGAGGAGCTGCA...GGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000395626.5
CDS-3UTR TCA 90 bp TTGGTACCAAACGATGGCCAGGGGTCTGAAGTACTCGCAGGAGCCGCTGGCCCGCTGGTTAGTGGAGGCTaGCGGGCCCCAGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LVPNDGQGSEVLAGAAGPLVSGG*RAPGLC
Trigger: GCAGAGCCCTGGGGCCCGTCAGCCTCCACTAACCAG...CGGGCCAGCGGCTCCTGCGAGTACTTCAGACCCCTGGCCATCGTTTGGTACCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580579.5
CDS-3UTR TCA 90 bp TCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTCGATGGCCAGGGGTCTaGAGTACTCGCAGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: SGGSTMAQVQHAWQWPVARWPGV*STRRSR
Trigger: GCGGCTCCTGCGAGTACTTCAGACCCCTGGCCATCG...AGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR TCA 90 bp CGGCAGACGAGACCAGCCACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCCGATGGCCAGGGGTCTaGAGTACTCGCAGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: RQTRPATGLPKWQREPKTRWPGV*STRRSR
Trigger: GCGGCTCCTGCGAGTACTTCAGACCCCTGGCCATCG...GGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGTGGCTGGTCTCGTCTGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp CCACCGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTGCCGGCACAGGTGCAACATaGGTGGCAGTGGCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: PPASGTEKQLGDFLHHGAGTGAT*VAVAGG
Trigger: GCCACCGGCCACTGCCACGCATGTTGCACCTGTGCC...GGCACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp CGGTGCCCATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGGGCACAGGTGCAACATaGGTGGCAGTGGCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: RCPSGGSTMAQVQHAWQWGTGAT*VAVAGG
Trigger: GCCACCGGCCACTGCCACGCATGTTGCACCTGTGCC...CCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGATGGGCACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp CCTCCACCACGGTGCCCATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGGGCACAGGTGCAACATaGGTGGCAGTGGCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: PPPRCPSGGSTMAQVQHAGTGAT*VAVAGG
Trigger: GCCACCGGCCACTGCCACGCATGTTGCACCTGTGCC...CGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGATGGGCACCGTGGTGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp TATCTGGAGTTAGCAGGTAGGTGGATCAGGGCCAGCCCTGGTCCCTTAGCCCCCCAGGGCTCTGCTTTCTaGGCCGCGGGGCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: YLELAGRWIRASPGPLAPQGSAF*AAGPEL
Trigger: CAGCTCGGGCCCCGCGGCCCAGAAAGCAGAGCCCTG...GGGGGCTAAGGGACCAGGGCTGGCCCTGATCCACCTACCTGCTAACTCCAGATA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp CAGGAACAGCATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCAGGGCTCTGCTTTCTaGGCCGCGGGGCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: QEQHEWVQSPLRACMSQQQGSAF*AAGPEL
Trigger: CAGCTCGGGCCCCGCGGCCCAGAAAGCAGAGCCCTG...CTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTCATGCTGTTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp GTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAACAGGGACATGCACACTCGCAGGAGCCGCTaGCCCGCCCCAGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: VAVAGGFMISAVGNRDMHTRRSR*PAPGVG
Trigger: ACCAACCCCTGGGGCGGGCCAGCGGCTCCTGCGAGT...GTGCATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp TCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCACTCGCAGGAGCCGCTaGCCCGCCCCAGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: SPNSWIPSHRRESLLGILTRRSR*PAPGVG
Trigger: ACCAACCCCTGGGGCGGGCCAGCGGCTCCTGCGAGT...GAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp TCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTACACGGGCTTGGTGGTaGAGACTGCGCCCCACGCGT +
Preference number: 4 (lower is better)
Translates to: SGGSTMAQVQHAWQWPVATRAWW*RLRPTR
Trigger: ACGCGTGGGGCGCAGTCTCCACCACCAAGCCCGTGT...AGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp ACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCCAGCCGCAGGCCTGCAGTCAGACACGGGCTTGGTaGTGGAGACTGCGCCCCACG +
Preference number: 4 (lower is better)
Translates to: TGLPKWQREPKTQPQACSQTRAW*WRLRPT
Trigger: CGTGGGGCGCAGTCTCCACCACCAAGCCCGTGTCTG...ACTGCAGGCCTGCGGCTGGGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp CCACGTCCTCGTCCAAGGCCTCAGAGGAGCCCTGCCAGGACCTCAGTGCTTTGGGCTGGTCCCCAGGACTaGGCTCCCCCGAAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: PRPRPRPQRSPARTSVLWAGPQD*APPKLV
Trigger: AACCAGCTTCGGGGGAGCCCAGTCCTGGGGACCAGC...CCAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGCCTTGGACGAGGACGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp GGGATGGCCTGTGCCAGAAGATGGGGCAGGGGGCTGTCTTCTTGGGTCCCGGTGGCCCAAAGGATGTGCTaGTCCCCAGGACTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GMACARRWGRGLSSWVPVAQRMC*SPGLGS
Trigger: GGAGCCCAGTCCTGGGGACCAGCACATCCTTTGGGC...CACCGGGACCCAAGAAGACAGCCCCCTGCCCCATCTTCTGGCACAGGCCATCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp ACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCCAGCCGCAGGCCTGCAGTCACGGCTCCTGGGACTaGAGAGGGCGGCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: TGLPKWQREPKTQPQACSHGSWD*RGRPQE
Trigger: TTCCTGAGGCCGCCCTCTCCAGTCCCAGGAGCCGTG...ACTGCAGGCCTGCGGCTGGGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp GAGCCTAAGACCCAGCCGCAGGCCTGCAGTTCTGGCAGAAGGTGGCTGGTCAGGAGGGGGCTGTCTTCTTaGGTCCCGGTGGCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: EPKTQPQACSSGRRWLVRRGLSS*VPVAQW
Trigger: CCACTGGGCCACCGGGACCCAAGAAGACAGCCCCCT...CCTGACCAGCCACCTTCTGCCAGAACTGCAGGCCTGCGGCTGGGTCTTAGGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR TCA 90 bp CGGTGCCCATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGGGTCATCACCCCGCCTaGGGCGTTCTTCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: RCPSGGSTMAQVQHAWQWGHHPA*GVLPAQ
Trigger: CTGAGCAGGAAGAACGCCTCAGGCGGGGTGATGACC...CCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGATGGGCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR TCA 90 bp CCACGTCCTCGTCCAAGGCCTCAGAGGAGCCCTGCCAGGACCTCAGTGCTTTGGGGTCATCACCCCGCCTaGGGCGTTCTTCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PRPRPRPQRSPARTSVLWGHHPA*GVLPAQ
Trigger: CTGAGCAGGAAGAACGCCTCAGGCGGGGTGATGACC...CCAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGCCTTGGACGAGGACGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR TCA 90 bp TCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCCTGGTTAGTGGAGGCTaGCGGGCCCCAGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SPNSWIPSHRRESLLGILLVSGG*RAPGLC
Trigger: GCAGAGCCCTGGGGCCCGTCAGCCTCCACTAACCAG...GAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR TCA 90 bp AGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCAGGCCTGGTCACCAGTaGGTCCAGGTTCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: RREHDGTGATCVAVAGGFRPGHQ*VQVHQG
Trigger: GCCCTGGTGAACCTGGACTCACTGGTGACCAGGCCT...GAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR GCA 90 bp GAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGTCTGGGGCCGGGCTTaGTCCAGCTCGGAGGACACT +
Preference number: 4 (lower is better)
Translates to: EGARWHRCNMRGSGRWLHVWGRA*SSSEDT
Trigger: AGTGTCCTCCGAGCTGGAGCAAGCCCGGCCCCAGAC...ATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp GAGCCTAAGACCCAGCCGCAGGCCTGCAGTTCTGGCAGAAGGTGGCTGGTCAGGGGGCACTGCTGGGCTTaGTTGAGGCGACAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: EPKTQPQACSSGRRWLVRGHCWA*LRRQSG
Trigger: CCCTGACTGTCGCCTCAAGCAAGCCCAGCAGTGCCC...CCTGACCAGCCACCTTCTGCCAGAACTGCAGGCCTGCGGCTGGGTCTTAGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR GCA 90 bp CCACGTCCTCGTCCAAGGCCTCAGAGGAGCCCTGCCAGGACCTCAGTGCTTTGGGGCGGGAGCACCTGGTaGCAGGAAAGGGTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: PRPRPRPQRSPARTSVLWGGSTW*QERVEG
Trigger: TCCCTCAACCCTTTCCTGGCACCAGGTGCTCCCGCC...CCAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGCCTTGGACGAGGACGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp CGTCCAAGGCCTCAGAGGAGCCCTGCCAGGACCTCAGTGCTTTGGAGGAGGTGGCAGGCCCAAAGGATGTaGTGGTCCCCAGGACTGGGC +
Preference number: 4 (lower is better)
Translates to: RPRPQRSPARTSVLWRRWQAQRM*WSPGLG
Trigger: GCCCAGTCCTGGGGACCAGCACATCCTTTGGGCCTG...CCACCTCCTCCAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGCCTTGGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp CCACGTCCTCGTCCAAGGCCTCAGAGGAGCCCTGCCAGGACCTCAGTGCTTTGGATCCTCCAGCACAGGTaGTCTGGGTGGGTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: PRPRPRPQRSPARTSVLWILQHR*SGWVPG
Trigger: GCCTGGGACCCACCCAGAGCACCTGTGCTGGAGGAT...CCAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGCCTTGGACGAGGACGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp GAGCCTAAGACCCAGCCGCAGGCCTGCAGTTCTGGCAGAAGGTGGCTGGTCAGGTTCTCCCGGCACTGCTaGGCCACACGTTCGGAGCCT +
Preference number: 4 (lower is better)
Translates to: EPKTQPQACSSGRRWLVRFSRHC*ATRSEP
Trigger: AGGCTCCGAACGTGTGGCCCAGCAGTGCCGGGAGAA...CCTGACCAGCCACCTTCTGCCAGAACTGCAGGCCTGCGGCTGGGTCTTAGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp TGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGCCCCTGTGCGGTGCTaGGGGCACAGCGAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: WHRCNMRGSGRWLHDQCSAPVRC*GHSEAS
Trigger: TGAGGCCTCGCTGTGCCCCCAGCACCGCACAGGGGC...ACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000395626.5
CDS-3UTR CCA 90 bp AGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCGGTGGCGGGAGCACCTaGTGCCAGGAAAGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: RREHDGTGATCVAVAGGFGGGST*CQERVE
Trigger: CTCAACCCTTTCCTGGCACCAGGTGCTCCCGCCACC...GAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp ACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCCAGCCGCAGGCCTGCAGTTCGAGGCCACAGCCATaGACTCCACTCCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: TGLPKWQREPKTQPQACSSRPQP*TPLLGQ
Trigger: CTGGCCCAGGAGTGGAGTCCATGGCTGTGGCCTCGA...ACTGCAGGCCTGCGGCTGGGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp CGTCCAAGGCCTCAGAGGAGCCCTGCCAGGACCTCAGTGCTTTGGAGGAGGTGGTCGAGGCCACAGCCATaGACTCCACTCCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RPRPQRSPARTSVLWRRWSRPQP*TPLLGQ
Trigger: CTGGCCCAGGAGTGGAGTCCATGGCTGTGGCCTCGA...CCACCTCCTCCAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGCCTTGGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp TATCTGGAGTTAGCAGGTAGGTGGATCAGGGCCAGCCCTGGTCCCTTAGCCCCCCCCCAGAGCTGGCTGTaGGGCCGCGGAGGTCATCGA +
Preference number: 4 (lower is better)
Translates to: YLELAGRWIRASPGPLAPPQSWL*GRGGHR
Trigger: TCGATGACCTCCGCGGCCCCACAGCCAGCTCTGGGG...GGGGGCTAAGGGACCAGGGCTGGCCCTGATCCACCTACCTGCTAACTCCAGATA
64% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp TCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCCCCCAGAGCTGGCTGTaGGGCCGCGGAGGTCATCGA +
Preference number: 4 (lower is better)
Translates to: SPNSWIPSHRRESLLGILPQSWL*GRGGHR
Trigger: TCGATGACCTCCGCGGCCCCACAGCCAGCTCTGGGG...GAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp GGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCTGGAGACAGTGGCCCCCAGAGCTaGCTGTGGGGCCGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: GQRQGHCPKSWARQHPGDSGPQS*LWGRGG
Trigger: ACCTCCGCGGCCCCACAGCCAGCTCTGGGGGCCACT...GTCTCCAGGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp TTAGGGGCAAGGGCAACACTGATGACTCCACGTCCTCGTCCAAGGCCTCAGAGGAGTGGCCCCCAGAGCTaGCTGTGGGGCCGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: LGARATLMTPRPRPRPQRSGPQS*LWGRGG
Trigger: ACCTCCGCGGCCCCACAGCCAGCTCTGGGGGCCACT...CCTCTGAGGCCTTGGACGAGGACGTGGAGTCATCAGTGTTGCCCTTGCCCCTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR TCA 90 bp TCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCCTGCGCGGTCACAAGTaGGGCAGGGCTGGGACCAGT +
Preference number: 4 (lower is better)
Translates to: SPNSWIPSHRRESLLGILLRGHK*GRAGTS
Trigger: ACTGGTCCCAGCCCTGCCTCACTTGTGACCGCGCAG...GAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314728.9
CDS-3UTR TCA 90 bp CCAGGCCCTGCACCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCTGCGCGGTCACAAGTaGGGCAGGGCTGGGACCAGT +
Preference number: 4 (lower is better)
Translates to: PGPAPSEGKHLSGQASCLLRGHK*GRAGTS
Trigger: ACTGGTCCCAGCCCTGCCTCACTTGTGACCGCGCAG...GAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGTGCAGGGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000395626.5
CDS-3UTR TCA 90 bp CCCCCATGGGTCAATGGAGGCAGCTGGCTTGGTACCAAACGATGGCCAGGGGTCGGTCATCACCCCGCCTaGGGCGTTCTTCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PPWVNGGSWLGTKRWPGVGHHPA*GVLPAQ
Trigger: CTGAGCAGGAAGAACGCCTCAGGCGGGGTGATGACC...GACCCCTGGCCATCGTTTGGTACCAAGCCAGCTGCCTCCATTGACCCATGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000580579.5
CDS-3UTR TCA 90 bp CCAGGCAAGCTGCCCAGACACAGGATTGGGGGAATGTCCCCTCCCTGGGTAAAACTGGTTAGTGGAGGCTaGCGGGCCCCAGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PGKLPRHRIGGMSPPWVKLVSGG*RAPGLC
Trigger: GCAGAGCCCTGGGGCCCGTCAGCCTCCACTAACCAG...TTTTACCCAGGGAGGGGACATTCCCCCAATCCTGTGTCTGGGCAGCTTGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR TCA 90 bp GCTGGCTTGGTACCAAACGATGGCCAGGGGTCTGAAGTACTCGCAGGAGCCGCTCGATGGCCAGGGGTCTaGAGTACTCGCAGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: AGLVPNDGQGSEVLAGAARWPGV*STRRSR
Trigger: GCGGCTCCTGCGAGTACTTCAGACCCCTGGCCATCG...AGCGGCTCCTGCGAGTACTTCAGACCCCTGGCCATCGTTTGGTACCAAGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580579.5
CDS-3UTR TCA 90 bp GGCGAGGGTCTGAGGGTTGGGGCTGTAAAGACAGCCCTTTCATCAGGAAGCTGGGGAGGCAGGCTGCTGTaGAGCTGCCCAGGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: GEGLRVGAVKTALSSGSWGGRLL*SCPGVR
Trigger: TCGGACCCCTGGGCAGCTTCACAGCAGCCTGCCTCC...CCAGCTTCCTGATGAAAGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR TCA 90 bp TTAGGGGCAAGGGCAACACTGATGACTCCACGTCCTCGTCCAAGGCCTCAGAGGGGAGGCAGGCTGCTGTaGAGCTGCCCAGGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: LGARATLMTPRPRPRPQRGGRLL*SCPGVR
Trigger: TCGGACCCCTGGGCAGCTTCACAGCAGCCTGCCTCC...CCTCTGAGGCCTTGGACGAGGACGTGGAGTCATCAGTGTTGCCCTTGCCCCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR TCA 90 bp CGTCCAAGGCCTCAGAGGAGCCCTGCCAGGACCTCAGTGCTTTGGAGGAGGTGGGCGACAGTCAGGGGTTaGGACTCAAAGGGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: RPRPQRSPARTSVLWRRWATVRG*DSKGSG
Trigger: CCCTGACCCCTTTGAGTCTCAACCCCTGACTGTCGC...CCACCTCCTCCAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGCCTTGGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR TCA 90 bp GGGATGGCCTGTGCCAGAAGATGGGGCAGGGGGCTGTCTTCTTGGGTCCCGGTGTGGCCGGTGGCTTCATaGTCAGTGCAGTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: GMACARRWGRGLSSWVPVWPVAS*SVQWAT
Trigger: TGTTGCCCACTGCACTGATCATGAAGCCACCGGCCA...CACCGGGACCCAAGAAGACAGCCCCCTGCCCCATCTTCTGGCACAGGCCATCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp GAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATATCCTCCAGCACAGGTaGTCTGGGTGGGTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: EGARWHRCNMRGSGRWLHILQHR*SGWVPG
Trigger: GCCTGGGACCCACCCAGAGCACCTGTGCTGGAGGAT...ATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR GCA 90 bp CGGCAGACGAGACCAGCCACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCGCACGATGGCACAGGTaGAACATGCGTGGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: RQTRPATGLPKWQREPKTARWHR*NMRGSG
Trigger: GCCACTGCCACGCATGTTGCACCTGTGCCATCGTGC...GGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGTGGCTGGTCTCGTCTGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp CCAAATGGCAGCGGGAGCCTAAGACCCAGCCGCAGGCCTGCAGTTCTGGCAGAAGGCCCCACGGGTCATTaGAGGTGGCTTCCCGGACTT +
Preference number: 4 (lower is better)
Translates to: PNGSGSLRPSRRPAVLAEGPTGH*RWLPGL
Trigger: AAGTCCGGGAAGCCACCTCCAATGACCCGTGGGGCC...TTCTGCCAGAACTGCAGGCCTGCGGCTGGGTCTTAGGCTCCCGCTGCCATTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp GCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGAGGAAGGGGTGGCGCTaGCTCAGTGGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ARWHRCNMRGSGRWLHDQRKGWR*LSGCSS
Trigger: GGAGCTGCAGCCACTGAGCCAGCGCCACCCCTTCCT...CTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000395626.5
CDS-3UTR CCA 90 bp GAGCCTAAGACCCAGCCGCAGGCCTGCAGTTCTGGCAGAAGGTGGCTGGTCAGGTCTTCTCCACTAGTCTaGGGCCGGGCTTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: EPKTQPQACSSGRRWLVRSSPLV*GRACSS
Trigger: GCTGGAGCAAGCCCGGCCCCAGACTAGTGGAGAAGA...CCTGACCAGCCACCTTCTGCCAGAACTGCAGGCCTGCGGCTGGGTCTTAGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp CGTCCAAGGCCTCAGAGGAGCCCTGCCAGGACCTCAGTGCTTTGGAGGAGGTGGCCGCGGGGCCCGAGCTaGGGAGAGCATCCATTAAAT +
Preference number: 4 (lower is better)
Translates to: RPRPQRSPARTSVLWRRWPRGPS*GEHPLN
Trigger: ATTTAATGGATGCTCTCCCCAGCTCGGGCCCCGCGG...CCACCTCCTCCAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGCCTTGGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp GAGCCTAAGACCCAGCCGCAGGCCTGCAGTTCTGGCAGAAGGTGGCTGGTCAGGCCGCGGGGCCCGAGCTaGGGAGAGCATCCATTAAAT +
Preference number: 4 (lower is better)
Translates to: EPKTQPQACSSGRRWLVRPRGPS*GEHPLN
Trigger: ATTTAATGGATGCTCTCCCCAGCTCGGGCCCCGCGG...CCTGACCAGCCACCTTCTGCCAGAACTGCAGGCCTGCGGCTGGGTCTTAGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp GTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAACAGGGACATGCACACACGGGCTTGGTGGTaGAGACTGCGCCCCACGCGT +
Preference number: 4 (lower is better)
Translates to: VAVAGGFMISAVGNRDMHTRAWW*RLRPTR
Trigger: ACGCGTGGGGCGCAGTCTCCACCACCAAGCCCGTGT...GTGCATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp GTGGGGAGGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCACACGGGCTTGGTGGTaGAGACTGCGCCCCACGCGT +
Preference number: 4 (lower is better)
Translates to: VGRTKTRPLSQVLGQATSTRAWW*RLRPTR
Trigger: ACGCGTGGGGCGCAGTCTCCACCACCAAGCCCGTGT...GGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp GTGGGGAGGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCCAGACACGGGCTTGGTaGTGGAGACTGCGCCCCACG +
Preference number: 4 (lower is better)
Translates to: VGRTKTRPLSQVLGQATSQTRAW*WRLRPT
Trigger: CGTGGGGCGCAGTCTCCACCACCAAGCCCGTGTCTG...GGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp TCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCCAGACACGGGCTTGGTaGTGGAGACTGCGCCCCACG +
Preference number: 4 (lower is better)
Translates to: SPNSWIPSHRRESLLGILQTRAW*WRLRPT
Trigger: CGTGGGGCGCAGTCTCCACCACCAAGCCCGTGTCTG...GAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp ATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCAGACAGACACGGGCTTaGTGGTGGAGACTGCGCCCC +
Preference number: 4 (lower is better)
Translates to: MSGCSPHSEPACPSSPETRQTRA*WWRLRP
Trigger: GGGGCGCAGTCTCCACCACCAAGCCCGTGTCTGTCT...GGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp GCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTCACCAGGGCCGCGTTaGGGCCCAGGAAGGACTCAG +
Preference number: 4 (lower is better)
Translates to: ARWHRCNMRGSGRWLHDQSPGPR*GPGRTQ
Trigger: CTGAGTCCTTCCTGGGCCCCAACGCGGCCCTGGTGA...CTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp CCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCCAGTCACCAGGGCCGCGTTaGGGCCCAGGAAGGACTCAG +
Preference number: 4 (lower is better)
Translates to: PNSWIPSHRRESLLGILQSPGPR*GPGRTQ
Trigger: CTGAGTCCTTCCTGGGCCCCAACGCGGCCCTGGTGA...CTGGAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp GTGGGGAGGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCGGGCTCCCCCGAAGCTaGTTCAGTGTCAGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: VGRTKTRPLSQVLGQATSGLPRS*FSVSGW
Trigger: CCAGCCGCTGACACTGAACCAGCTTCGGGGGAGCCC...GGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp CCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCCAGGGGCTCCCCCGAAGCTaGTTCAGTGTCAGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: PNSWIPSHRRESLLGILQGLPRS*FSVSGW
Trigger: CCAGCCGCTGACACTGAACCAGCTTCGGGGGAGCCC...CTGGAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp GGGGAGGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCTGGCTGGTCCCCAGGACTaGGCTCCCCCGAAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: GEDKDKATVPSPGPGNILAGPQD*APPKLV
Trigger: AACCAGCTTCGGGGGAGCCCAGTCCTGGGGACCAGC...CAGGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp TCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCGCTGGTCCCCAGGACTaGGCTCCCCCGAAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: SPNSWIPSHRRESLLGILAGPQD*APPKLV
Trigger: AACCAGCTTCGGGGGAGCCCAGTCCTGGGGACCAGC...GAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp CAACATCCTGGAGACCCTCGGGCTGAGGTTAGGGGCAAGGGCAACACTGATGACCCCCAGAGCTGGCTGTaGGGCCGCGGAGGTCATCGA +
Preference number: 4 (lower is better)
Translates to: QHPGDPRAEVRGKGNTDDPQSWL*GRGGHR
Trigger: TCGATGACCTCCGCGGCCCCACAGCCAGCTCTGGGG...GTCATCAGTGTTGCCCTTGCCCCTAACCTCAGCCCGAGGGTCTCCAGGATGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp GGCGAGGGTCTGAGGGTTGGGGCTGTAAAGACAGCCCTTTCATCAGGAAGCTGGCCAGCACAGGTGCTCTaGGTGGGTCCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GEGLRVGAVKTALSSGSWPAQVL*VGPRPR
Trigger: CCTGGGCCTGGGACCCACCCAGAGCACCTGTGCTGG...CCAGCTTCCTGATGAAAGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp GGGATGGCCTGTGCCAGAAGATGGGGCAGGGGGCTGTCTTCTTGGGTCCCGGTGCGAGGGTCTGAGGGTTaGGGCTGTAAAGACAGCCCT +
Preference number: 4 (lower is better)
Translates to: GMACARRWGRGLSSWVPVRGSEG*GCKDSP
Trigger: AGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCG...CACCGGGACCCAAGAAGACAGCCCCCTGCCCCATCTTCTGGCACAGGCCATCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp GAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGAACCAGAGAGGGGCTaGCAGGTGGTCAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: EGARWHRCNMRGSGRWLHEPERG*QVVSCP
Trigger: AGGGCAGCTGACCACCTGCCAGCCCCTCTCTGGTTC...ATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp GAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCATTCTAGACACGGCTCCTaGGACTGGAGAGGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: EWVQSPLRACMSQQPRDHSRHGS*DWRGRP
Trigger: AGGCCGCCCTCTCCAGTCCCAGGAGCCGTGTCTAGA...ATGGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp GTGGGGAGGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCAGGGGGCTGTCTTCTTaGGTCCCGGTGGCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: VGRTKTRPLSQVLGQATSRGLSS*VPVAQW
Trigger: CCACTGGGCCACCGGGACCCAAGAAGACAGCCCCCT...GGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp CCAGGCCCTGCACCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCAGGGGGCTGTCTTCTTaGGTCCCGGTGGCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: PGPAPSEGKHLSGQASCLRGLSS*VPVAQW
Trigger: CCACTGGGCCACCGGGACCCAAGAAGACAGCCCCCT...GAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGTGCAGGGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp CGGTGCCCATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGGCCTGTGCCAGAAGATaGGGCAGGGGGCTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: RCPSGGSTMAQVQHAWQWACARR*GRGLSS
Trigger: AGAAGACAGCCCCCTGCCCCATCTTCTGGCACAGGC...CCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGATGGGCACCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp ATGGAGGCAGCTGGCTTGGTACCAAACGATGGCCAGGGGTCTGAAGTACTCGCAACACTCGCGGGGAGGTaGCTCTGCTCCTCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: MEAAGLVPNDGQGSEVLATLAGR*LCSSGP
Trigger: CGGCCCGGAGGAGCAGAGCCACCTCCCCGCGAGTGT...TGCGAGTACTTCAGACCCCTGGCCATCGTTTGGTACCAAGCCAGCTGCCTCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580579.5
CDS-3UTR TCA 90 bp CCACCGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTGCCTGCCCGACACAGAAATaGACACTCTGCTCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: PPASGTEKQLGDFLHHGACPTQK*TLCSSG
Trigger: CCCGGAGGAGCAGAGTGTTCATTTCTGTGTCGGGCA...GGCACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR TCA 90 bp GTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAACAGGGACATGCACGGTCATCACCCCGCCTaGGGCGTTCTTCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: VAVAGGFMISAVGNRDMHGHHPA*GVLPAQ
Trigger: CTGAGCAGGAAGAACGCCTCAGGCGGGGTGATGACC...GTGCATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR TCA 90 bp GCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCATTTAAGATCCTGGTTAGTGGAGGCTaGCGGGCCCCAGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: AVPTQSLHVPAAQRPFKILVSGG*RAPGLC
Trigger: GCAGAGCCCTGGGGCCCGTCAGCCTCCACTAACCAG...GATCTTAAATGGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR TCA 90 bp GGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCTGGAGACCGATGGCCAGGGGTCTaGAGTACTCGCAGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: GQRQGHCPKSWARQHPGDRWPGV*STRRSR
Trigger: GCGGCTCCTGCGAGTACTTCAGACCCCTGGCCATCG...GTCTCCAGGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR TCA 90 bp AGGGTAATCTTCTGGAACCAGAGAGGGGCTGGCAGGTGGTCAGCTGCCCTTAGAGGAGGCAGGCTGCTGTaGAGCTGCCCAGGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: RVIFWNQRGAGRWSAALRGGRLL*SCPGVR
Trigger: TCGGACCCCTGGGCAGCTTCACAGCAGCCTGCCTCC...TCTAAGGGCAGCTGACCACCTGCCAGCCCCTCTCTGGTTCCAGAAGATTACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR TCA 90 bp GAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGCGACAGTCAGGGGTTaGGACTCAAAGGGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: EGARWHRCNMRGSGRWLHATVRG*DSKGSG
Trigger: CCCTGACCCCTTTGAGTCTCAACCCCTGACTGTCGC...ATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR TCA 90 bp GAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCATGCCTCAGGAACAGCATaGGTGGGTGCAGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: EWVQSPLRACMSQQPRDHASGTA*VGAVPT
Trigger: AGTGGGGACTGCACCCACTCATGCTGTTCCTGAGGC...ATGGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR TCA 90 bp CGGTGCCCATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGAGGCCCTGCACCGTCTaGAGGAAAGCACCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: RCPSGGSTMAQVQHAWQWRPCTV*RKAPFW
Trigger: CCAGAAAGGTGCTTTCCTTCAGACGGTGCAGGGCCT...CCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGATGGGCACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR TCA 90 bp CCTGTGCCAGAAGATGGGGCAGGGGGCTGTCTTCTTGGGTCCCGGTGGCCCAGTTCGAGTCTAGTCTACTaGCCTGTAAGGCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PVPEDGAGGCLLGSRWPSSSLVY*PVRLAQ
Trigger: CTGGGCCAGCCTTACAGGTCAGTAGACTAGACTCGA...ACTGGGCCACCGGGACCCAAGAAGACAGCCCCCTGCCCCATCTTCTGGCACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp CCAGGCAAGCTGCCCAGACACAGGATTGGGGGAATGTCCCCTCCCTGGGTAAAAGTCTGGGGCCGGGCTTaGTCCAGCTCGGAGGACACT +
Preference number: 4 (lower is better)
Translates to: PGKLPRHRIGGMSPPWVKVWGRA*SSSEDT
Trigger: AGTGTCCTCCGAGCTGGAGCAAGCCCGGCCCCAGAC...TTTTACCCAGGGAGGGGACATTCCCCCAATCCTGTGTCTGGGCAGCTTGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp TCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCCTTGGTGGTGGAGACTaGGCCCCACGCGTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: SPNSWIPSHRRESLLGILLGGGD*APRVRS
Trigger: GCTTCTGACGCGTGGGGCGCAGTCTCCACCACCAAG...GAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR GCA 90 bp CCAGGCCCTGCACCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCGGGCACTGCTGGGCTTaGTTGAGGCGACAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: PGPAPSEGKHLSGQASCLGHCWA*LRRQSG
Trigger: CCCTGACTGTCGCCTCAAGCAAGCCCAGCAGTGCCC...GAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGTGCAGGGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR GCA 90 bp GTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAACAGGGACATGCACGGCGGGAGCACCTGGTaGCAGGAAAGGGTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: VAVAGGFMISAVGNRDMHGGSTW*QERVEG
Trigger: TCCCTCAACCCTTTCCTGGCACCAGGTGCTCCCGCC...GTGCATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR GCA 90 bp GTGGGGAGGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCGGCGGGAGCACCTGGTaGCAGGAAAGGGTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: VGRTKTRPLSQVLGQATSGGSTW*QERVEG
Trigger: TCCCTCAACCCTTTCCTGGCACCAGGTGCTCCCGCC...GGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp TATCTGGAGTTAGCAGGTAGGTGGATCAGGGCCAGCCCTGGTCCCTTAGCCCCCACCCAGCCGCAGGCCTaGAGTTCTGGCAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: YLELAGRWIRASPGPLAPTQPQA*SSGRRW
Trigger: CCACCTTCTGCCAGAACTGCAGGCCTGCGGCTGGGT...GGGGGCTAAGGGACCAGGGCTGGCCCTGATCCACCTACCTGCTAACTCCAGATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp GCCCAGGCCCTGCACCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTGGGCAACAGGGACATaGACTCGGGATGGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: AQALHRLKESTFLGKHPAWATGT*TRDGLC
Trigger: GCACAGGCCATCCCGAGTGCATGTCCCTGTTGCCCA...GGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGTGCAGGGCCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp GTGGGGAGGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCGGCCCCACGGGTCATTaGAGGTGGCTTCCCGGACTT +
Preference number: 4 (lower is better)
Translates to: VGRTKTRPLSQVLGQATSGPTGH*RWLPGL
Trigger: AAGTCCGGGAAGCCACCTCCAATGACCCGTGGGGCC...GGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395620.6
CDS-3UTR CCA 90 bp GCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCATTTAAGATCTGCGGCAGGAAGGGGTaGCGCTGGCTCAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: AVPTQSLHVPAAQRPFKICGRKG*RWLSGC
Trigger: GCAGCCACTGAGCCAGCGCCACCCCTTCCTGCCGCA...GATCTTAAATGGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000395626.5
CDS-3UTR CCA 90 bp TTGGTACCAAACGATGGCCAGGGGTCTGAAGTACTCGCAGGAGCCGCTGGCCCGTCTTCTCCACTAGTCTaGGGCCGGGCTTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LVPNDGQGSEVLAGAAGPSSPLV*GRACSS
Trigger: GCTGGAGCAAGCCCGGCCCCAGACTAGTGGAGAAGA...CGGGCCAGCGGCTCCTGCGAGTACTTCAGACCCCTGGCCATCGTTTGGTACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580579.5
CDS-3UTR CCA 90 bp AATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCCAGGGCTCTGCTTTCTaGGCCGCGGGGCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: NTPNPQTLGSRPTDESPCQGSAF*AAGPEL
Trigger: CAGCTCGGGCCCCGCGGCCCAGAAAGCAGAGCCCTG...GCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp CAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCAGGACTGCCTACTCGCAGGAGCCGCTaGCCCGCCCCAGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: QKVSYGAGASSCPHPGLPTRRSR*PAPGVG
Trigger: ACCAACCCCTGGGGCGGGCCAGCGGCTCCTGCGAGT...AGGCAGTCCTGGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp GAGCCTAAGACCCAGCCGCAGGCCTGCAGTTCTGGCAGAAGGTGGCTGGTCAGGTGGAGGCAGCTGGCTTaGTACCAAACGATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: EPKTQPQACSSGRRWLVRWRQLA*YQTMAR
Trigger: CCTGGCCATCGTTTGGTACCAAGCCAGCTGCCTCCA...CCTGACCAGCCACCTTCTGCCAGAACTGCAGGCCTGCGGCTGGGTCTTAGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp TTAGGGGCAAGGGCAACACTGATGACTCCACGTCCTCGTCCAAGGCCTCAGAGGACACGGGCTTGGTGGTaGAGACTGCGCCCCACGCGT +
Preference number: 4 (lower is better)
Translates to: LGARATLMTPRPRPRPQRTRAWW*RLRPTR
Trigger: ACGCGTGGGGCGCAGTCTCCACCACCAAGCCCGTGT...CCTCTGAGGCCTTGGACGAGGACGTGGAGTCATCAGTGTTGCCCTTGCCCCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp CAACATCCTGGAGACCCTCGGGCTGAGGTTAGGGGCAAGGGCAACACTGATGACCAGACACGGGCTTGGTaGTGGAGACTGCGCCCCACG +
Preference number: 4 (lower is better)
Translates to: QHPGDPRAEVRGKGNTDDQTRAW*WRLRPT
Trigger: CGTGGGGCGCAGTCTCCACCACCAAGCCCGTGTCTG...GTCATCAGTGTTGCCCTTGCCCCTAACCTCAGCCCGAGGGTCTCCAGGATGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp TTAGGGGCAAGGGCAACACTGATGACTCCACGTCCTCGTCCAAGGCCTCAGAGGCAGACACGGGCTTGGTaGTGGAGACTGCGCCCCACG +
Preference number: 4 (lower is better)
Translates to: LGARATLMTPRPRPRPQRQTRAW*WRLRPT
Trigger: CGTGGGGCGCAGTCTCCACCACCAAGCCCGTGTCTG...CCTCTGAGGCCTTGGACGAGGACGTGGAGTCATCAGTGTTGCCCTTGCCCCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp GGGGAGGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCTGAGACAGACACGGGCTTaGTGGTGGAGACTGCGCCCC +
Preference number: 4 (lower is better)
Translates to: GEDKDKATVPSPGPGNILRQTRA*WWRLRP
Trigger: GGGGCGCAGTCTCCACCACCAAGCCCGTGTCTGTCT...CAGGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp CCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCCAGAGACAGACACGGGCTTaGTGGTGGAGACTGCGCCCC +
Preference number: 4 (lower is better)
Translates to: PNSWIPSHRRESLLGILQRQTRA*WWRLRP
Trigger: GGGGCGCAGTCTCCACCACCAAGCCCGTGTCTGTCT...CTGGAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp GGCGAGGGTCTGAGGGTTGGGGCTGTAAAGACAGCCCTTTCATCAGGAAGCTGGTCACCAGGGCCGCGTTaGGGCCCAGGAAGGACTCAG +
Preference number: 4 (lower is better)
Translates to: GEGLRVGAVKTALSSGSWSPGPR*GPGRTQ
Trigger: CTGAGTCCTTCCTGGGCCCCAACGCGGCCCTGGTGA...CCAGCTTCCTGATGAAAGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp CCAGGCCCTGCACCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCTGGTGGGGCAGGCCTaGTCACCAGTGAGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PGPAPSEGKHLSGQASCLLVGQA*SPVSPG
Trigger: ACCTGGACTCACTGGTGACCAGGCCTGCCCCACCAG...GAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGTGCAGGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp TCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCGGTGGCGGGAGCACCTaGTGCCAGGAAAGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: SPNSWIPSHRRESLLGILGGGST*CQERVE
Trigger: CTCAACCCTTTCCTGGCACCAGGTGCTCCCGCCACC...GAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp CCAGCAGCCCAGAGACCATTTAAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCAGTGGCCCCCAGAGCTaGCTGTGGGGCCGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: PAAQRPFKISPVPVRRVISGPQS*LWGRGG
Trigger: ACCTCCGCGGCCCCACAGCCAGCTCTGGGGGCCACT...GATTACCCTTCGCACCGGCACAGGAGAGATCTTAAATGGTCTCTGGGCTGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp CAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCAGGACTGCCTAGTGGCCCCCAGAGCTaGCTGTGGGGCCGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: QKVSYGAGASSCPHPGLPSGPQS*LWGRGG
Trigger: ACCTCCGCGGCCCCACAGCCAGCTCTGGGGGCCACT...AGGCAGTCCTGGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp AATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCAGTGGCCCCCAGAGCTaGCTGTGGGGCCGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: NTPNPQTLGSRPTDESPCSGPQS*LWGRGG
Trigger: ACCTCCGCGGCCCCACAGCCAGCTCTGGGGGCCACT...GCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp GTGGGGAGGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCGGTTGGTTGTGCCAGTaGCCTGGGCTGCTGATGGGG +
Preference number: 4 (lower is better)
Translates to: VGRTKTRPLSQVLGQATSGWLCQ*PGLLMG
Trigger: CCCCATCAGCAGCCCAGGCCACTGGCACAACCAACC...GGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp CCTGTGCCAGAAGATGGGGCAGGGGGCTGTCTTCTTGGGTCCCGGTGGCCCAGTAGAGAAGGAAAGGGTTaGTTGTGCCAGTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PVPEDGAGGCLLGSRWPSREGKG*LCQWPG
Trigger: CCCAGGCCACTGGCACAACCAACCCTTTCCTTCTCT...ACTGGGCCACCGGGACCCAAGAAGACAGCCCCCTGCCCCATCTTCTGGCACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp GCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCATTTAAGATCCCAGCACAGGTGCTCTaGGTGGGTCCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AVPTQSLHVPAAQRPFKIPAQVL*VGPRPR
Trigger: CCTGGGCCTGGGACCCACCCAGAGCACCTGTGCTGG...GATCTTAAATGGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp ACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCCAGCCGCAGGCCTGCAGTCACTGTCCCAAGTCCTaGGCCAGGCAACATCCTGGA +
Preference number: 4 (lower is better)
Translates to: TGLPKWQREPKTQPQACSHCPKS*ARQHPG
Trigger: TCCAGGATGTTGCCTGGCCCAGGACTTGGGACAGTG...ACTGCAGGCCTGCGGCTGGGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp CCACGTCCTCGTCCAAGGCCTCAGAGGAGCCCTGCCAGGACCTCAGTGCTTTGGCACTGTCCCAAGTCCTaGGCCAGGCAACATCCTGGA +
Preference number: 4 (lower is better)
Translates to: PRPRPRPQRSPARTSVLWHCPKS*ARQHPG
Trigger: TCCAGGATGTTGCCTGGCCCAGGACTTGGGACAGTG...CCAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGCCTTGGACGAGGACGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp GGGATGGCCTGTGCCAGAAGATGGGGCAGGGGGCTGTCTTCTTGGGTCCCGGTGCGAAGGGTAATCTTCTaGAACCAGAGAGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GMACARRWGRGLSSWVPVRRVIF*NQRGAG
Trigger: GCCAGCCCCTCTCTGGTTCCAGAAGATTACCCTTCG...CACCGGGACCCAAGAAGACAGCCCCCTGCCCCATCTTCTGGCACAGGCCATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp GGCGAGGGTCTGAGGGTTGGGGCTGTAAAGACAGCCCTTTCATCAGGAAGCTGGCACGGCTCCTGGGACTaGAGAGGGCGGCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: GEGLRVGAVKTALSSGSWHGSWD*RGRPQE
Trigger: TTCCTGAGGCCGCCCTCTCCAGTCCCAGGAGCCGTG...CCAGCTTCCTGATGAAAGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp CCACGTCCTCGTCCAAGGCCTCAGAGGAGCCCTGCCAGGACCTCAGTGCTTTGGACCGGCTTACCCAAATaGCAGCGGGAGCCTAAGACC +
Preference number: 4 (lower is better)
Translates to: PRPRPRPQRSPARTSVLWTGLPK*QREPKT
Trigger: GGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGT...CCAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGCCTTGGACGAGGACGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp AGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCACCGGCTTACCCAAATaGCAGCGGGAGCCTAAGACC +
Preference number: 4 (lower is better)
Translates to: RREHDGTGATCVAVAGGFTGLPK*QREPKT
Trigger: GGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGT...GAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp CGGTGCCCATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCTTCTTGGGTCCCGGTaGCCCAGTGGCTGTCATGTT +
Preference number: 4 (lower is better)
Translates to: RCPSGGSTMAQVQHAWQWLLGSR*PSGCHV
Trigger: AACATGACAGCCACTGGGCCACCGGGACCCAAGAAG...CCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGATGGGCACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp CGTCCAAGGCCTCAGAGGAGCCCTGCCAGGACCTCAGTGCTTTGGAGGAGGTGGGACATGCACTCGGGATaGCCTGTGCCAGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: RPRPQRSPARTSVLWRRWDMHSG*PVPEDG
Trigger: CCCATCTTCTGGCACAGGCCATCCCGAGTGCATGTC...CCACCTCCTCCAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGCCTTGGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp GCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCACACTCGCGGGGAGGTaGCTCTGCTCCTCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: ALIPLIPKLLDPVPQTRVTLAGR*LCSSGP
Trigger: CGGCCCGGAGGAGCAGAGCCACCTCCCCGCGAGTGT...GACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395618.7
ENST00000575595.5
CDS-3UTR TCA 90 bp CCAGCAGCCCAGAGACCATTTAAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCTGCAGCTCCTCACTCTaGCCCAGCGGGGCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: PAAQRPFKISPVPVRRVICSSSL*PSGAPV
Trigger: CACAGGGGCCCCGCTGGGTCAGAGTGAGGAGCTGCA...GATTACCCTTCGCACCGGCACAGGAGAGATCTTAAATGGTCTCTGGGCTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000395626.5
CDS-3UTR TCA 90 bp GCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCTGGTTAGTGGAGGCTaGCGGGCCCCAGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: ALIPLIPKLLDPVPQTRVLVSGG*RAPGLC
Trigger: GCAGAGCCCTGGGGCCCGTCAGCCTCCACTAACCAG...GACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR TCA 90 bp CCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCCAGGCGACAGTCAGGGGTTaGGACTCAAAGGGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: PNSWIPSHRRESLLGILQATVRG*DSKGSG
Trigger: CCCTGACCCCTTTGAGTCTCAACCCCTGACTGTCGC...CTGGAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR TCA 90 bp CCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCCAGAGTGGCCTGGGCTGCTaGTGGGGGTATACCCACACT +
Preference number: 4 (lower is better)
Translates to: PNSWIPSHRRESLLGILQSGLGC*WGYTHT
Trigger: AGTGTGGGTATACCCCCATCAGCAGCCCAGGCCACT...CTGGAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR TCA 90 bp GAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCATAGGCCCTGCACCGTCTaGAGGAAAGCACCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: EWVQSPLRACMSQQPRDHRPCTV*RKAPFW
Trigger: CCAGAAAGGTGCTTTCCTTCAGACGGTGCAGGGCCT...ATGGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR TCA 90 bp CCACGTCCTCGTCCAAGGCCTCAGAGGAGCCCTGCCAGGACCTCAGTGCTTTGGGTAAAACTGGGGAGCTaGGTGGACATACCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PRPRPRPQRSPARTSVLWVKLGS*VDIPSL
Trigger: GAGGCTGGGTATGTCCACTCAGCTCCCCAGTTTTAC...CCAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGCCTTGGACGAGGACGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395620.6
CDS-3UTR GCA 90 bp ATGGAGGCAGCTGGCTTGGTACCAAACGATGGCCAGGGGTCTGAAGTACTCGCAGTCTGGGGCCGGGCTTaGTCCAGCTCGGAGGACACT +
Preference number: 4 (lower is better)
Translates to: MEAAGLVPNDGQGSEVLAVWGRA*SSSEDT
Trigger: AGTGTCCTCCGAGCTGGAGCAAGCCCGGCCCCAGAC...TGCGAGTACTTCAGACCCCTGGCCATCGTTTGGTACCAAGCCAGCTGCCTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580579.5
CDS-3UTR GCA 90 bp ACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCCAGCCGCAGGCCTGCAGTGCTCAGCCACTTCTCTaGTCATGGCAAGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: TGLPKWQREPKTQPQACSAQPLL*SWQVPA
Trigger: AGCTGGCACTTGCCATGAGCAGAGAAGTGGCTGAGC...ACTGCAGGCCTGCGGCTGGGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp CGGCAGACGAGACCAGCCACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCGCTCAGCCACTTCTCTaGTCATGGCAAGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RQTRPATGLPKWQREPKTAQPLL*SWQVPA
Trigger: AGCTGGCACTTGCCATGAGCAGAGAAGTGGCTGAGC...GGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGTGGCTGGTCTCGTCTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp CGGCAGACGAGACCAGCCACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCTCCAACAGCGTAGTCTaGTGTGGGAGAGAGCCATGC +
Preference number: 4 (lower is better)
Translates to: RQTRPATGLPKWQREPKTSNSVV*CGREPC
Trigger: GCATGGCTCTCTCCCACAGCAGACTACGCTGTTGGA...GGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGTGGCTGGTCTCGTCTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp CGTCCAAGGCCTCAGAGGAGCCCTGCCAGGACCTCAGTGCTTTGGAGGAGGTGGTCCAACAGCGTAGTCTaGTGTGGGAGAGAGCCATGC +
Preference number: 4 (lower is better)
Translates to: RPRPQRSPARTSVLWRRWSNSVV*CGREPC
Trigger: GCATGGCTCTCTCCCACAGCAGACTACGCTGTTGGA...CCACCTCCTCCAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGCCTTGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp TGGTACCAAACGATGGCCAGGGGTCTGAAGTACTCGCAGGAGCCGCTGGCCCGCTCCAACAGCGTAGTCTaGTGTGGGAGAGAGCCATGC +
Preference number: 4 (lower is better)
Translates to: WYQTMARGLKYSQEPLARSNSVV*CGREPC
Trigger: GCATGGCTCTCTCCCACAGCAGACTACGCTGTTGGA...GCGGGCCAGCGGCTCCTGCGAGTACTTCAGACCCCTGGCCATCGTTTGGTACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580579.5
CDS-3UTR GCA 90 bp GGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCTGGAGACCTTGGTGGTGGAGACTaGGCCCCACGCGTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: GQRQGHCPKSWARQHPGDLGGGD*APRVRS
Trigger: GCTTCTGACGCGTGGGGCGCAGTCTCCACCACCAAG...GTCTCCAGGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp CAACATCCTGGAGACCCTCGGGCTGAGGTTAGGGGCAAGGGCAACACTGATGACCTTGGTGGTGGAGACTaGGCCCCACGCGTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: QHPGDPRAEVRGKGNTDDLGGGD*APRVRS
Trigger: GCTTCTGACGCGTGGGGCGCAGTCTCCACCACCAAG...GTCATCAGTGTTGCCCTTGCCCCTAACCTCAGCCCGAGGGTCTCCAGGATGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp GGCGAGGGTCTGAGGGTTGGGGCTGTAAAGACAGCCCTTTCATCAGGAAGCTGGGGGCACTGCTGGGCTTaGTTGAGGCGACAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: GEGLRVGAVKTALSSGSWGHCWA*LRRQSG
Trigger: CCCTGACTGTCGCCTCAAGCAAGCCCAGCAGTGCCC...CCAGCTTCCTGATGAAAGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR GCA 90 bp AGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCCGCCCTCGGGACAACTaGCATTTCCACATTATCCCC +
Preference number: 4 (lower is better)
Translates to: RREHDGTGATCVAVAGGFRPRDN*HFHIIP
Trigger: GGGGATAATGTGGAAATGGCAGTTGTCCCGAGGGCG...GAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp CCAGGCCCTGCACCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCTCCCCACTCAGAGCCTaGATGTCCCAGCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: PGPAPSEGKHLSGQASCLSPLRA*MSQQPR
Trigger: TCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGA...GAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGTGCAGGGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp GAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCATTCTGGGCAAGCATCCTaGCTCCCATCCCATTGCACC +
Preference number: 4 (lower is better)
Translates to: EWVQSPLRACMSQQPRDHSGQAS*LPSHCT
Trigger: GGTGCAATGGGATGGGAGGCAGGATGCTTGCCCAGA...ATGGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp GTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAACAGGGACATGCACGCACGATGGCACAGGTaGAACATGCGTGGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: VAVAGGFMISAVGNRDMHARWHR*NMRGSG
Trigger: GCCACTGCCACGCATGTTGCACCTGTGCCATCGTGC...GTGCATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp TGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTCTTCCTCCACCACGGTaGCCATCAGGAGGGAGCACG +
Preference number: 4 (lower is better)
Translates to: WHRCNMRGSGRWLHDQCSLPPPR*PSGGST
Trigger: CGTGCTCCCTCCTGATGGGCACCGTGGTGGAGGAAG...ACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp GTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAACAGGGACATGCACCAAGTGAGGCAGGGCTaGGACCAGTCGCCATTTGGG +
Preference number: 4 (lower is better)
Translates to: VAVAGGFMISAVGNRDMHQVRQG*DQSPFG
Trigger: CCCAAATGGCGACTGGTCCCAGCCCTGCCTCACTTG...GTGCATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000395626.5
CDS-3UTR CCA 90 bp GGGGAGGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCTGCCGCGGGGCCCGAGCTaGGGAGAGCATCCATTAAAT +
Preference number: 4 (lower is better)
Translates to: GEDKDKATVPSPGPGNILPRGPS*GEHPLN
Trigger: ATTTAATGGATGCTCTCCCCAGCTCGGGCCCCGCGG...CAGGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp CTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTACTCGCAGGAGCCGCTaGCCCGCCCCAGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: LIPLIPKLLDPVPQTRVPTRRSR*PAPGVG
Trigger: ACCAACCCCTGGGGCGGGCCAGCGGCTCCTGCGAGT...AGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp AGCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTACTCGCAGGAGCCGCTaGCCCGCCCCAGGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: SPNTPNPQTLGSRPTDESTRRSR*PAPGVG
Trigger: ACCAACCCCTGGGGCGGGCCAGCGGCTCCTGCGAGT...ACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp GGCTTGGTACCAAACGATGGCCAGGGGTCTGAAGTACTCGCAGGAGCCGCTGGCTGGAGGCAGCTGGCTTaGTACCAAACGATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GLVPNDGQGSEVLAGAAGWRQLA*YQTMAR
Trigger: CCTGGCCATCGTTTGGTACCAAGCCAGCTGCCTCCA...GCCAGCGGCTCCTGCGAGTACTTCAGACCCCTGGCCATCGTTTGGTACCAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580579.5
CDS-3UTR CCA 90 bp CCTCCACCACGGTGCCCATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGAGGGGTCCGAGTTCTTaGGGACAGATTGTACGGTGG +
Preference number: 4 (lower is better)
Translates to: PPPRCPSGGSTMAQVQHARGPSS*GQIVRW
Trigger: CCACCGTACAATCTGTCCCCAAGAACTCGGACCCCT...CGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGATGGGCACCGTGGTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp CGGCAGACGAGACCAGCCACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCCTCTTTTCCCAGCACTaGAGGCAGGCTGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: RQTRPATGLPKWQREPKTLFSQH*RQAAVK
Trigger: CTTCACAGCAGCCTGCCTCCAGTGCTGGGAAAAGAG...GGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGTGGCTGGTCTCGTCTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp AGGGTAATCTTCTGGAACCAGAGAGGGGCTGGCAGGTGGTCAGCTGCCCTTAGAACACGGGCTTGGTGGTaGAGACTGCGCCCCACGCGT +
Preference number: 4 (lower is better)
Translates to: RVIFWNQRGAGRWSAALRTRAWW*RLRPTR
Trigger: ACGCGTGGGGCGCAGTCTCCACCACCAAGCCCGTGT...TCTAAGGGCAGCTGACCACCTGCCAGCCCCTCTCTGGTTCCAGAAGATTACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp AGGGTAATCTTCTGGAACCAGAGAGGGGCTGGCAGGTGGTCAGCTGCCCTTAGACAGACACGGGCTTGGTaGTGGAGACTGCGCCCCACG +
Preference number: 4 (lower is better)
Translates to: RVIFWNQRGAGRWSAALRQTRAW*WRLRPT
Trigger: CGTGGGGCGCAGTCTCCACCACCAAGCCCGTGTCTG...TCTAAGGGCAGCTGACCACCTGCCAGCCCCTCTCTGGTTCCAGAAGATTACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp TTAGGGGCAAGGGCAACACTGATGACTCCACGTCCTCGTCCAAGGCCTCAGAGGAGACAGACACGGGCTTaGTGGTGGAGACTGCGCCCC +
Preference number: 4 (lower is better)
Translates to: LGARATLMTPRPRPRPQRRQTRA*WWRLRP
Trigger: GGGGCGCAGTCTCCACCACCAAGCCCGTGTCTGTCT...CCTCTGAGGCCTTGGACGAGGACGTGGAGTCATCAGTGTTGCCCTTGCCCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp GGCGAGGGTCTGAGGGTTGGGGCTGTAAAGACAGCCCTTTCATCAGGAAGCTGGCTGGTGGGGCAGGCCTaGTCACCAGTGAGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GEGLRVGAVKTALSSGSWLVGQA*SPVSPG
Trigger: ACCTGGACTCACTGGTGACCAGGCCTGCCCCACCAG...CCAGCTTCCTGATGAAAGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp GGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCTGGAGACGCCCAAAGGATGTGCTaGTCCCCAGGACTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GQRQGHCPKSWARQHPGDAQRMC*SPGLGS
Trigger: GGAGCCCAGTCCTGGGGACCAGCACATCCTTTGGGC...GTCTCCAGGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp GAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCATCATGGACTCCACTCCTaGGCCAGGCCCAAAGGATGT +
Preference number: 4 (lower is better)
Translates to: EWVQSPLRACMSQQPRDHHGLHS*ARPKGC
Trigger: ACATCCTTTGGGCCTGGCCCAGGAGTGGAGTCCATG...ATGGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp TTAGGGGCAAGGGCAACACTGATGACTCCACGTCCTCGTCCAAGGCCTCAGAGGGGTTGGTTGTGCCAGTaGCCTGGGCTGCTGATGGGG +
Preference number: 4 (lower is better)
Translates to: LGARATLMTPRPRPRPQRGWLCQ*PGLLMG
Trigger: CCCCATCAGCAGCCCAGGCCACTGGCACAACCAACC...CCTCTGAGGCCTTGGACGAGGACGTGGAGTCATCAGTGTTGCCCTTGCCCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp AATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCCCAGCACAGGTGCTCTaGGTGGGTCCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: NTPNPQTLGSRPTDESPCPAQVL*VGPRPR
Trigger: CCTGGGCCTGGGACCCACCCAGAGCACCTGTGCTGG...GCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp GAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCATGAGTTAGCAGGTAGGTaGATCAGGGCCAGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: EWVQSPLRACMSQQPRDHELAGR*IRASPG
Trigger: ACCAGGGCTGGCCCTGATCCACCTACCTGCTAACTC...ATGGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp CCACGTCCTCGTCCAAGGCCTCAGAGGAGCCCTGCCAGGACCTCAGTGCTTTGGCAGGAACAGCATGAGTaGGTGCAGTCCCCACTCAGA +
Preference number: 4 (lower is better)
Translates to: PRPRPRPQRSPARTSVLWQEQHE*VQSPLR
Trigger: TCTGAGTGGGGACTGCACCCACTCATGCTGTTCCTG...CCAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGCCTTGGACGAGGACGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp GAGCCTAAGACCCAGCCGCAGGCCTGCAGTTCTGGCAGAAGGTGGCTGGTCAGGCTGGCAGAAGGTGGCTaGTCAGGAACTCTAGACACG +
Preference number: 4 (lower is better)
Translates to: EPKTQPQACSSGRRWLVRLAEGG*SGTLDT
Trigger: CGTGTCTAGAGTTCCTGACCAGCCACCTTCTGCCAG...CCTGACCAGCCACCTTCTGCCAGAACTGCAGGCCTGCGGCTGGGTCTTAGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp TCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTAGGAAAGCACCTTTCTaGGCAAGCATCCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: SGGSTMAQVQHAWQWPVARKAPF*ASILPP
Trigger: GGGAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCT...AGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR TCA 90 bp AGCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCTGGTTAGTGGAGGCTaGCGGGCCCCAGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SPNTPNPQTLGSRPTDESLVSGG*RAPGLC
Trigger: GCAGAGCCCTGGGGCCCGTCAGCCTCCACTAACCAG...ACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR TCA 90 bp CAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCAGGACTGCCTCGATGGCCAGGGGTCTaGAGTACTCGCAGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: QKVSYGAGASSCPHPGLPRWPGV*STRRSR
Trigger: GCGGCTCCTGCGAGTACTTCAGACCCCTGGCCATCG...AGGCAGTCCTGGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR TCA 90 bp AATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCCGATGGCCAGGGGTCTaGAGTACTCGCAGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: NTPNPQTLGSRPTDESPCRWPGV*STRRSR
Trigger: GCGGCTCCTGCGAGTACTTCAGACCCCTGGCCATCG...GCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR TCA 90 bp CTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGGAGGCAGGCTGCTGTaGAGCTGCCCAGGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: LIPLIPKLLDPVPQTRVPGGRLL*SCPGVR
Trigger: TCGGACCCCTGGGCAGCTTCACAGCAGCCTGCCTCC...AGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR TCA 90 bp GGCGAGGGTCTGAGGGTTGGGGCTGTAAAGACAGCCCTTTCATCAGGAAGCTGGAGTGGCCTGGGCTGCTaGTGGGGGTATACCCACACT +
Preference number: 4 (lower is better)
Translates to: GEGLRVGAVKTALSSGSWSGLGC*WGYTHT
Trigger: AGTGTGGGTATACCCCCATCAGCAGCCCAGGCCACT...CCAGCTTCCTGATGAAAGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR TCA 90 bp CCTGTGCCAGAAGATGGGGCAGGGGGCTGTCTTCTTGGGTCCCGGTGGCCCAGTTCCCCATCTTTAGCCTaGGCGTGGATTAAGACAGAG +
Preference number: 4 (lower is better)
Translates to: PVPEDGAGGCLLGSRWPSSPSLA*AWIKTE
Trigger: CTCTGTCTTAATCCACGCTCAGGCTAAAGATGGGGA...ACTGGGCCACCGGGACCCAAGAAGACAGCCCCCTGCCCCATCTTCTGGCACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR TCA 90 bp CCAGGCAAGCTGCCCAGACACAGGATTGGGGGAATGTCCCCTCCCTGGGTAAAAGCCTCAGGAACAGCATaGGTGGGTGCAGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: PGKLPRHRIGGMSPPWVKASGTA*VGAVPT
Trigger: AGTGGGGACTGCACCCACTCATGCTGTTCCTGAGGC...TTTTACCCAGGGAGGGGACATTCCCCCAATCCTGTGTCTGGGCAGCTTGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR TCA 90 bp GAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATTCGAGTCTAGTCTACTaGCCTGTAAGGCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: EGARWHRCNMRGSGRWLHSSLVY*PVRLAQ
Trigger: CTGGGCCAGCCTTACAGGTCAGTAGACTAGACTCGA...ATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp CAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCAGGACTGCCTGTCTGGGGCCGGGCTTaGTCCAGCTCGGAGGACACT +
Preference number: 4 (lower is better)
Translates to: QKVSYGAGASSCPHPGLPVWGRA*SSSEDT
Trigger: AGTGTCCTCCGAGCTGGAGCAAGCCCGGCCCCAGAC...AGGCAGTCCTGGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp GCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCGTCTGGGGCCGGGCTTaGTCCAGCTCGGAGGACACT +
Preference number: 4 (lower is better)
Translates to: ALIPLIPKLLDPVPQTRVVWGRA*SSSEDT
Trigger: AGTGTCCTCCGAGCTGGAGCAAGCCCGGCCCCAGAC...GACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR GCA 90 bp GGCTTGGTACCAAACGATGGCCAGGGGTCTGAAGTACTCGCAGGAGCCGCTGGCGCTCAGCCACTTCTCTaGTCATGGCAAGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GLVPNDGQGSEVLAGAAGAQPLL*SWQVPA
Trigger: AGCTGGCACTTGCCATGAGCAGAGAAGTGGCTGAGC...GCCAGCGGCTCCTGCGAGTACTTCAGACCCCTGGCCATCGTTTGGTACCAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580579.5
CDS-3UTR GCA 90 bp GAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCATCTGAGGCGTTCTTCCTaGTCAGCCACTTCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: EWVQSPLRACMSQQPRDHLRRSS*SATSLL
Trigger: GAGCAGAGAAGTGGCTGAGCAGGAAGAACGCCTCAG...ATGGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp GGCTTGGTACCAAACGATGGCCAGGGGTCTGAAGTACTCGCAGGAGCCGCTGGCCTGAGGCGTTCTTCCTaGTCAGCCACTTCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: GLVPNDGQGSEVLAGAAGLRRSS*SATSLL
Trigger: GAGCAGAGAAGTGGCTGAGCAGGAAGAACGCCTCAG...GCCAGCGGCTCCTGCGAGTACTTCAGACCCCTGGCCATCGTTTGGTACCAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580579.5
CDS-3UTR GCA 90 bp AGGGTAATCTTCTGGAACCAGAGAGGGGCTGGCAGGTGGTCAGCTGCCCTTAGACTTGGTGGTGGAGACTaGGCCCCACGCGTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: RVIFWNQRGAGRWSAALRLGGGD*APRVRS
Trigger: GCTTCTGACGCGTGGGGCGCAGTCTCCACCACCAAG...TCTAAGGGCAGCTGACCACCTGCCAGCCCCTCTCTGGTTCCAGAAGATTACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp CCAGGCCCTGCACCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCGTGTTTTCCGGGCACTaGTGGGCTTGCTTGAGGCGA +
Preference number: 4 (lower is better)
Translates to: PGPAPSEGKHLSGQASCLVFSGH*WACLRR
Trigger: TCGCCTCAAGCAAGCCCAGCAGTGCCCGGAAAACAC...GAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGTGCAGGGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR GCA 90 bp CCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCCAGGTGTTTTCCGGGCACTaGTGGGCTTGCTTGAGGCGA +
Preference number: 4 (lower is better)
Translates to: PNSWIPSHRRESLLGILQVFSGH*WACLRR
Trigger: TCGCCTCAAGCAAGCCCAGCAGTGCCCGGAAAACAC...CTGGAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR GCA 90 bp GGCGAGGGTCTGAGGGTTGGGGCTGTAAAGACAGCCCTTTCATCAGGAAGCTGGGGAAAGGGTTGGTTGTaGCAGTGGCCTGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GEGLRVGAVKTALSSGSWGKGWL*QWPGLL
Trigger: CAGCAGCCCAGGCCACTGGCACAACCAACCCTTTCC...CCAGCTTCCTGATGAAAGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR GCA 90 bp TCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCCTGCCAGGACCTCAGTaGTTTGGAGGAGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SPNSWIPSHRRESLLGILLPGPQ*FGGGGE
Trigger: CTCACCACCTCCTCCAAAGCACTGAGGTCCTGGCAG...GAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp AGGGTAATCTTCTGGAACCAGAGAGGGGCTGGCAGGTGGTCAGCTGCCCTTAGACTTCCTCCACCACGGTaGCCATCAGGAGGGAGCACG +
Preference number: 4 (lower is better)
Translates to: RVIFWNQRGAGRWSAALRLPPPR*PSGGST
Trigger: CGTGCTCCCTCCTGATGGGCACCGTGGTGGAGGAAG...TCTAAGGGCAGCTGACCACCTGCCAGCCCCTCTCTGGTTCCAGAAGATTACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp CAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCAGGACTGCCTAGGAAGGGGTGGCGCTaGCTCAGTGGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QKVSYGAGASSCPHPGLPRKGWR*LSGCSS
Trigger: GGAGCTGCAGCCACTGAGCCAGCGCCACCCCTTCCT...AGGCAGTCCTGGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314728.9
CDS-3UTR CCA 90 bp AGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAACAAGTGAGGCAGGGCTaGGACCAGTCGCCATTTGGG +
Preference number: 4 (lower is better)
Translates to: RCNMRGSGRWLHDQCSGQQVRQG*DQSPFG
Trigger: CCCAAATGGCGACTGGTCCCAGCCCTGCCTCACTTG...TTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000395626.5
CDS-3UTR CCA 90 bp AGGCAGCTGGCTTGGTACCAAACGATGGCCAGGGGTCTGAAGTACTCGCAGGAGCCGCGGGGCCCGAGCTaGGGAGAGCATCCATTAAAT +
Preference number: 4 (lower is better)
Translates to: RQLAWYQTMARGLKYSQEPRGPS*GEHPLN
Trigger: ATTTAATGGATGCTCTCCCCAGCTCGGGCCCCGCGG...CTCCTGCGAGTACTTCAGACCCCTGGCCATCGTTTGGTACCAAGCCAGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580579.5
CDS-3UTR CCA 90 bp CCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCCAGTGGAGGCAGCTGGCTTaGTACCAAACGATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PNSWIPSHRRESLLGILQWRQLA*YQTMAR
Trigger: CCTGGCCATCGTTTGGTACCAAGCCAGCTGCCTCCA...CTGGAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp CGGTGCCCATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGGTCAATGGAGGCAGCTaGCTTGGTACCAAACGATGG +
Preference number: 4 (lower is better)
Translates to: RCPSGGSTMAQVQHAWQWVNGGS*LGTKRW
Trigger: CCATCGTTTGGTACCAAGCCAGCTGCCTCCATTGAC...CCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGATGGGCACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp CGTCCAAGGCCTCAGAGGAGCCCTGCCAGGACCTCAGTGCTTTGGAGGAGGTGGGTCAATGGAGGCAGCTaGCTTGGTACCAAACGATGG +
Preference number: 4 (lower is better)
Translates to: RPRPQRSPARTSVLWRRWVNGGS*LGTKRW
Trigger: CCATCGTTTGGTACCAAGCCAGCTGCCTCCATTGAC...CCACCTCCTCCAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGCCTTGGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp GCCCAGGCCCTGCACCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCAGGGGTCCGAGTTCTTaGGGACAGATTGTACGGTGG +
Preference number: 4 (lower is better)
Translates to: AQALHRLKESTFLGKHPARGPSS*GQIVRW
Trigger: CCACCGTACAATCTGTCCCCAAGAACTCGGACCCCT...GGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGTGCAGGGCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp GTTCAAAACCAGCCACCGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCAGACAGACACGGGCTTaGTGGTGGAGACTGCGCCCC +
Preference number: 4 (lower is better)
Translates to: VQNQPPASGTEKQLGDFLRQTRA*WWRLRP
Trigger: GGGGCGCAGTCTCCACCACCAAGCCCGTGTCTGTCT...GAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGGTGGCTGGTTTTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp GTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAACAGGGACATGCACTGGGGCTGGTTCACCTaGAAAGGGTTAACAGGGGCC +
Preference number: 4 (lower is better)
Translates to: VAVAGGFMISAVGNRDMHWGWFT*KGLTGA
Trigger: GGCCCCTGTTAACCCTTTCCAGGTGAACCAGCCCCA...GTGCATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp TCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCTGGGGCTGGTTCACCTaGAAAGGGTTAACAGGGGCC +
Preference number: 4 (lower is better)
Translates to: SPNSWIPSHRRESLLGILWGWFT*KGLTGA
Trigger: GGCCCCTGTTAACCCTTTCCAGGTGAACCAGCCCCA...GAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp GTGGGGAGGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCTGGGGCTGGTTCACCTaGAAAGGGTTAACAGGGGCC +
Preference number: 4 (lower is better)
Translates to: VGRTKTRPLSQVLGQATSWGWFT*KGLTGA
Trigger: GGCCCCTGTTAACCCTTTCCAGGTGAACCAGCCCCA...GGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp CCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCCAGGTCAGCGGCTGGGGCTaGTTCACCTGGAAAGGGTTA +
Preference number: 4 (lower is better)
Translates to: PNSWIPSHRRESLLGILQVSGWG*FTWKGL
Trigger: TAACCCTTTCCAGGTGAACCAGCCCCAGCCGCTGAC...CTGGAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp CAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCAGGACTGCCTGCTGGTCCCCAGGACTaGGCTCCCCCGAAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: QKVSYGAGASSCPHPGLPAGPQD*APPKLV
Trigger: AACCAGCTTCGGGGGAGCCCAGTCCTGGGGACCAGC...AGGCAGTCCTGGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp GCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCATTTAAGATCGCCCAAAGGATGTGCTaGTCCCCAGGACTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: AVPTQSLHVPAAQRPFKIAQRMC*SPGLGS
Trigger: GGAGCCCAGTCCTGGGGACCAGCACATCCTTTGGGC...GATCTTAAATGGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp GGGGAGGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCTGCATGGACTCCACTCCTaGGCCAGGCCCAAAGGATGT +
Preference number: 4 (lower is better)
Translates to: GEDKDKATVPSPGPGNILHGLHS*ARPKGC
Trigger: ACATCCTTTGGGCCTGGCCCAGGAGTGGAGTCCATG...CAGGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp TCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCCATGGACTCCACTCCTaGGCCAGGCCCAAAGGATGT +
Preference number: 4 (lower is better)
Translates to: SPNSWIPSHRRESLLGILHGLHS*ARPKGC
Trigger: ACATCCTTTGGGCCTGGCCCAGGAGTGGAGTCCATG...GAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp CAACATCCTGGAGACCCTCGGGCTGAGGTTAGGGGCAAGGGCAACACTGATGACTCAGAGAGGAACCAGTaGCCCCCAGAGCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: QHPGDPRAEVRGKGNTDDSERNQ*PPELAV
Trigger: CACAGCCAGCTCTGGGGGCCACTGGTTCCTCTCTGA...GTCATCAGTGTTGCCCTTGCCCCTAACCTCAGCCCGAGGGTCTCCAGGATGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp AGCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCAGCACAGGTGCTCTaGGTGGGTCCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SPNTPNPQTLGSRPTDESPAQVL*VGPRPR
Trigger: CCTGGGCCTGGGACCCACCCAGAGCACCTGTGCTGG...ACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp TCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCCGAGGGTCTGAGGGTTaGGGCTGTAAAGACAGCCCT +
Preference number: 4 (lower is better)
Translates to: SPNSWIPSHRRESLLGILRGSEG*GCKDSP
Trigger: AGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCG...GAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp CCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCCAGCGAGGGTCTGAGGGTTaGGGCTGTAAAGACAGCCCT +
Preference number: 4 (lower is better)
Translates to: PNSWIPSHRRESLLGILQRGSEG*GCKDSP
Trigger: AGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCG...CTGGAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp GCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGGAGTTAGCAGGTAGGTaGATCAGGGCCAGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: ARWHRCNMRGSGRWLHDQELAGR*IRASPG
Trigger: ACCAGGGCTGGCCCTGATCCACCTACCTGCTAACTC...CTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp AGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAAAGAGGGGCTGGCAGGTaGTCAGCTGCCCTTAGAGCT +
Preference number: 4 (lower is better)
Translates to: RCNMRGSGRWLHDQCSGQRGAGR*SAALRA
Trigger: AGCTCTAAGGGCAGCTGACCACCTGCCAGCCCCTCT...TTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp CCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCCAGCTTCTTGGGTCCCGGTaGCCCAGTGGCTGTCATGTT +
Preference number: 4 (lower is better)
Translates to: PNSWIPSHRRESLLGILQLLGSR*PSGCHV
Trigger: AACATGACAGCCACTGGGCCACCGGGACCCAAGAAG...CTGGAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp TATCTGGAGTTAGCAGGTAGGTGGATCAGGGCCAGCCCTGGTCCCTTAGCCCCCCGTGGCAGTGGCCGGTaGCTTCATGATCAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: YLELAGRWIRASPGPLAPRGSGR*LHDQCS
Trigger: ACTGCACTGATCATGAAGCCACCGGCCACTGCCACG...GGGGGCTAAGGGACCAGGGCTGGCCCTGATCCACCTACCTGCTAACTCCAGATA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp AGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAACAGGTGCAACATGCGTaGCAGTGGCCGGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: RCNMRGSGRWLHDQCSGQQVQHA*QWPVAS
Trigger: TGAAGCCACCGGCCACTGCCACGCATGTTGCACCTG...TTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp GGGGAGGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCTGCAGGAGGGAGCACGATaGCACAGGTGCAACATGCGT +
Preference number: 4 (lower is better)
Translates to: GEDKDKATVPSPGPGNILQEGAR*HRCNMR
Trigger: ACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTG...CAGGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp GGCGAGGGTCTGAGGGTTGGGGCTGTAAAGACAGCCCTTTCATCAGGAAGCTGGGAGGGTGGGAGACTGTaGTCCAGCAGCAGGTACTGG +
Preference number: 4 (lower is better)
Translates to: GEGLRVGAVKTALSSGSWEGGRL*SSSRYW
Trigger: CCAGTACCTGCTGCTGGACCACAGTCTCCCACCCTC...CCAGCTTCCTGATGAAAGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395620.6
CDS-3UTR TCA 90 bp ACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCCAGCCGCAGGCCTGCAGTTCCACGTCTCTGATATaGGGCTCCTGTCCACAAGTT +
Preference number: 4 (lower is better)
Translates to: TGLPKWQREPKTQPQACSSTSLI*GSCPQV
Trigger: AACTTGTGGACAGGAGCCTCATATCAGAGACGTGGA...ACTGCAGGCCTGCGGCTGGGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR TCA 90 bp CGTCCAAGGCCTCAGAGGAGCCCTGCCAGGACCTCAGTGCTTTGGAGGAGGTGGTCCACGTCTCTGATATaGGGCTCCTGTCCACAAGTT +
Preference number: 4 (lower is better)
Translates to: RPRPQRSPARTSVLWRRWSTSLI*GSCPQV
Trigger: AACTTGTGGACAGGAGCCTCATATCAGAGACGTGGA...CCACCTCCTCCAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGCCTTGGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395620.6
CDS-3UTR TCA 90 bp GAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCATAAAAGCTGGAAGCCATaGCCAGGCTACAGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: EWVQSPLRACMSQQPRDHKSWKP*PGYSEV
Trigger: GACCTCACTGTAGCCTGGTCATGGCTTCCAGCTTTT...ATGGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR TCA 90 bp CTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCCATCCCATTGCACCTGGTCATCACCCCGCCTaGGGCGTTCTTCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: LKESTFLGKHPASHPIAPGHHPA*GVLPAQ
Trigger: CTGAGCAGGAAGAACGCCTCAGGCGGGGTGATGACC...AGGTGCAATGGGATGGGAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR TCA 90 bp ACCACTTCCCCAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCAGGCCTGGTCACCAGTaGGTCCAGGTTCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: TTSPKGVLWSRCFIVSTPRPGHQ*VQVHQG
Trigger: GCCCTGGTGAACCTGGACTCACTGGTGACCAGGCCT...GGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTGGGGAAGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR TCA 90 bp GCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCATTTAAGATCAGTGGCCTGGGCTGCTaGTGGGGGTATACCCACACT +
Preference number: 4 (lower is better)
Translates to: AVPTQSLHVPAAQRPFKISGLGC*WGYTHT
Trigger: AGTGTGGGTATACCCCCATCAGCAGCCCAGGCCACT...GATCTTAAATGGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR TCA 90 bp CGTCCAAGGCCTCAGAGGAGCCCTGCCAGGACCTCAGTGCTTTGGAGGAGGTGGTCCCCATCTTTAGCCTaGGCGTGGATTAAGACAGAG +
Preference number: 4 (lower is better)
Translates to: RPRPQRSPARTSVLWRRWSPSLA*AWIKTE
Trigger: CTCTGTCTTAATCCACGCTCAGGCTAAAGATGGGGA...CCACCTCCTCCAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGCCTTGGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR TCA 90 bp GTTCAAAACCAGCCACCGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCGCCTCAGGAACAGCATaGGTGGGTGCAGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: VQNQPPASGTEKQLGDFLASGTA*VGAVPT
Trigger: AGTGGGGACTGCACCCACTCATGCTGTTCCTGAGGC...GAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGGTGGCTGGTTTTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR TCA 90 bp AGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAATGGCCGGTGGCTTCATaGTCAGTGCAGTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: RCNMRGSGRWLHDQCSGQWPVAS*SVQWAT
Trigger: TGTTGCCCACTGCACTGATCATGAAGCCACCGGCCA...TTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp TATCTGGAGTTAGCAGGTAGGTGGATCAGGGCCAGCCCTGGTCCCTTAGCCCCCGCTCAGCCACTTCTCTaGTCATGGCAAGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: YLELAGRWIRASPGPLAPAQPLL*SWQVPA
Trigger: AGCTGGCACTTGCCATGAGCAGAGAAGTGGCTGAGC...GGGGGCTAAGGGACCAGGGCTGGCCCTGATCCACCTACCTGCTAACTCCAGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp GGGGAGGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCTGGCTCAGCCACTTCTCTaGTCATGGCAAGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GEDKDKATVPSPGPGNILAQPLL*SWQVPA
Trigger: AGCTGGCACTTGCCATGAGCAGAGAAGTGGCTGAGC...CAGGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp GCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGCTGAGGCGTTCTTCCTaGTCAGCCACTTCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: ARWHRCNMRGSGRWLHDQLRRSS*SATSLL
Trigger: GAGCAGAGAAGTGGCTGAGCAGGAAGAACGCCTCAG...CTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp TATCTGGAGTTAGCAGGTAGGTGGATCAGGGCCAGCCCTGGTCCCTTAGCCCCCTCCAACAGCGTAGTCTaGTGTGGGAGAGAGCCATGC +
Preference number: 4 (lower is better)
Translates to: YLELAGRWIRASPGPLAPSNSVV*CGREPC
Trigger: GCATGGCTCTCTCCCACAGCAGACTACGCTGTTGGA...GGGGGCTAAGGGACCAGGGCTGGCCCTGATCCACCTACCTGCTAACTCCAGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp TTAGGGGCAAGGGCAACACTGATGACTCCACGTCCTCGTCCAAGGCCTCAGAGGGTGTTTTCCGGGCACTaGTGGGCTTGCTTGAGGCGA +
Preference number: 4 (lower is better)
Translates to: LGARATLMTPRPRPRPQRVFSGH*WACLRR
Trigger: TCGCCTCAAGCAAGCCCAGCAGTGCCCGGAAAACAC...CCTCTGAGGCCTTGGACGAGGACGTGGAGTCATCAGTGTTGCCCTTGCCCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp AATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCCAGGCCCAAAGGATGTaGTGGTCCCCAGGACTGGGC +
Preference number: 4 (lower is better)
Translates to: NTPNPQTLGSRPTDESPCQAQRM*WSPGLG
Trigger: GCCCAGTCCTGGGGACCAGCACATCCTTTGGGCCTG...GCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR GCA 90 bp GCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCAGGCCCAAAGGATGTaGTGGTCCCCAGGACTGGGC +
Preference number: 4 (lower is better)
Translates to: ALIPLIPKLLDPVPQTRVQAQRM*WSPGLG
Trigger: GCCCAGTCCTGGGGACCAGCACATCCTTTGGGCCTG...GACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR GCA 90 bp ATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCCACCATGTTCATCATTaGAGGGCCCAGTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: MSGCSPHSEPACPSSPETHHVHH*RAQWCQ
Trigger: CTGACACCACTGGGCCCTGCAATGATGAACATGGTG...GGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR GCA 90 bp ACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCCAGCCGCAGGCCTGCAGTGGGGTATACCCACACTaGCCACCATGTTCATCATTG +
Preference number: 4 (lower is better)
Translates to: TGLPKWQREPKTQPQACSGVYPH*PPCSSL
Trigger: CAATGATGAACATGGTGGGCAGTGTGGGTATACCCC...ACTGCAGGCCTGCGGCTGGGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR GCA 90 bp ACCACTTCCCCAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCATCCTCCAGCACAGGTaGTCTGGGTGGGTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TTSPKGVLWSRCFIVSTPILQHR*SGWVPG
Trigger: GCCTGGGACCCACCCAGAGCACCTGTGCTGGAGGAT...GGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTGGGGAAGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp GGCGAGGGTCTGAGGGTTGGGGCTGTAAAGACAGCCCTTTCATCAGGAAGCTGGCTGCCAGGACCTCAGTaGTTTGGAGGAGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: GEGLRVGAVKTALSSGSWLPGPQ*FGGGGE
Trigger: CTCACCACCTCCTCCAAAGCACTGAGGTCCTGGCAG...CCAGCTTCCTGATGAAAGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp GAGCCTAAGACCCAGCCGCAGGCCTGCAGTTCTGGCAGAAGGTGGCTGGTCAGGTGGCTTCATGATCAGTaGAGTGGGCAACAGGGACAT +
Preference number: 4 (lower is better)
Translates to: EPKTQPQACSSGRRWLVRWLHDQ*SGQQGH
Trigger: ATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCA...CCTGACCAGCCACCTTCTGCCAGAACTGCAGGCCTGCGGCTGGGTCTTAGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp TCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTGGCTTCATGATCAGTaGAGTGGGCAACAGGGACAT +
Preference number: 4 (lower is better)
Translates to: SGGSTMAQVQHAWQWPVAWLHDQ*SGQQGH
Trigger: ATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCA...AGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp ACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCCAGCCGCAGGCCTGCAGTTGGCTTCATGATCAGTaGAGTGGGCAACAGGGACAT +
Preference number: 4 (lower is better)
Translates to: TGLPKWQREPKTQPQACSWLHDQ*SGQQGH
Trigger: ATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCA...ACTGCAGGCCTGCGGCTGGGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp GCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCATTTAAGATCCCGCGGGGCCCGAGCTaGGGAGAGCATCCATTAAAT +
Preference number: 4 (lower is better)
Translates to: AVPTQSLHVPAAQRPFKIPRGPS*GEHPLN
Trigger: ATTTAATGGATGCTCTCCCCAGCTCGGGCCCCGCGG...GATCTTAAATGGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp TCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCAGGGGTCCGAGTTCTTaGGGACAGATTGTACGGTGG +
Preference number: 4 (lower is better)
Translates to: SPNSWIPSHRRESLLGILRGPSS*GQIVRW
Trigger: CCACCGTACAATCTGTCCCCAAGAACTCGGACCCCT...GAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp CCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCCAGCTCTTTTCCCAGCACTaGAGGCAGGCTGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: PNSWIPSHRRESLLGILQLFSQH*RQAAVK
Trigger: CTTCACAGCAGCCTGCCTCCAGTGCTGGGAAAAGAG...CTGGAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp CTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTACACGGGCTTGGTGGTaGAGACTGCGCCCCACGCGT +
Preference number: 4 (lower is better)
Translates to: LIPLIPKLLDPVPQTRVPTRAWW*RLRPTR
Trigger: ACGCGTGGGGCGCAGTCTCCACCACCAAGCCCGTGT...AGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp CTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTTCACCAGGGCCGCGTTaGGGCCCAGGAAGGACTCAG +
Preference number: 4 (lower is better)
Translates to: LIPLIPKLLDPVPQTRVPSPGPR*GPGRTQ
Trigger: CTGAGTCCTTCCTGGGCCCCAACGCGGCCCTGGTGA...AGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp CTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCCATCCCATTGCACCTCTGGTGGGGCAGGCCTaGTCACCAGTGAGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LKESTFLGKHPASHPIAPLVGQA*SPVSPG
Trigger: ACCTGGACTCACTGGTGACCAGGCCTGCCCCACCAG...AGGTGCAATGGGATGGGAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp AATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCGGTGGCGGGAGCACCTaGTGCCAGGAAAGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: NTPNPQTLGSRPTDESPCGGGST*CQERVE
Trigger: CTCAACCCTTTCCTGGCACCAGGTGCTCCCGCCACC...GCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp AGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAAGTCAGCGGCTGGGGCTaGTTCACCTGGAAAGGGTTA +
Preference number: 4 (lower is better)
Translates to: RCNMRGSGRWLHDQCSGQVSGWG*FTWKGL
Trigger: TAACCCTTTCCAGGTGAACCAGCCCCAGCCGCTGAC...TTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp TTAGGGGCAAGGGCAACACTGATGACTCCACGTCCTCGTCCAAGGCCTCAGAGGGTCAGCGGCTGGGGCTaGTTCACCTGGAAAGGGTTA +
Preference number: 4 (lower is better)
Translates to: LGARATLMTPRPRPRPQRVSGWG*FTWKGL
Trigger: TAACCCTTTCCAGGTGAACCAGCCCCAGCCGCTGAC...CCTCTGAGGCCTTGGACGAGGACGTGGAGTCATCAGTGTTGCCCTTGCCCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp GTGGGGAGGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCTTCAGTGTCAGCGGCTaGGGCTGGTTCACCTGGAAA +
Preference number: 4 (lower is better)
Translates to: VGRTKTRPLSQVLGQATSFSVSG*GWFTWK
Trigger: TTTCCAGGTGAACCAGCCCCAGCCGCTGACACTGAA...GGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp GTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAACAGGGACATGCACTTCAGTGTCAGCGGCTaGGGCTGGTTCACCTGGAAA +
Preference number: 4 (lower is better)
Translates to: VAVAGGFMISAVGNRDMHFSVSG*GWFTWK
Trigger: TTTCCAGGTGAACCAGCCCCAGCCGCTGACACTGAA...GTGCATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp GCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCGCCCAAAGGATGTGCTaGTCCCCAGGACTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: ALIPLIPKLLDPVPQTRVAQRMC*SPGLGS
Trigger: GGAGCCCAGTCCTGGGGACCAGCACATCCTTTGGGC...GACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp AGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAACATGGACTCCACTCCTaGGCCAGGCCCAAAGGATGT +
Preference number: 4 (lower is better)
Translates to: RCNMRGSGRWLHDQCSGQHGLHS*ARPKGC
Trigger: ACATCCTTTGGGCCTGGCCCAGGAGTGGAGTCCATG...TTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp GCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCATTTAAGATCTCAGAGAGGAACCAGTaGCCCCCAGAGCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: AVPTQSLHVPAAQRPFKISERNQ*PPELAV
Trigger: CACAGCCAGCTCTGGGGGCCACTGGTTCCTCTCTGA...GATCTTAAATGGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp CAACATCCTGGAGACCCTCGGGCTGAGGTTAGGGGCAAGGGCAACACTGATGACCGAGGGTCTGAGGGTTaGGGCTGTAAAGACAGCCCT +
Preference number: 4 (lower is better)
Translates to: QHPGDPRAEVRGKGNTDDRGSEG*GCKDSP
Trigger: AGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCG...GTCATCAGTGTTGCCCTTGCCCCTAACCTCAGCCCGAGGGTCTCCAGGATGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp GGCGAGGGTCTGAGGGTTGGGGCTGTAAAGACAGCCCTTTCATCAGGAAGCTGGCACTGTCCCAAGTCCTaGGCCAGGCAACATCCTGGA +
Preference number: 4 (lower is better)
Translates to: GEGLRVGAVKTALSSGSWHCPKS*ARQHPG
Trigger: TCCAGGATGTTGCCTGGCCCAGGACTTGGGACAGTG...CCAGCTTCCTGATGAAAGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp CCAGGCAAGCTGCCCAGACACAGGATTGGGGGAATGTCCCCTCCCTGGGTAAAAGAGTTAGCAGGTAGGTaGATCAGGGCCAGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: PGKLPRHRIGGMSPPWVKELAGR*IRASPG
Trigger: ACCAGGGCTGGCCCTGATCCACCTACCTGCTAACTC...TTTTACCCAGGGAGGGGACATTCCCCCAATCCTGTGTCTGGGCAGCTTGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp AGGGTAATCTTCTGGAACCAGAGAGGGGCTGGCAGGTGGTCAGCTGCCCTTAGAAGAGGGGCTGGCAGGTaGTCAGCTGCCCTTAGAGCT +
Preference number: 4 (lower is better)
Translates to: RVIFWNQRGAGRWSAALRRGAGR*SAALRA
Trigger: AGCTCTAAGGGCAGCTGACCACCTGCCAGCCCCTCT...TCTAAGGGCAGCTGACCACCTGCCAGCCCCTCTCTGGTTCCAGAAGATTACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp GAGCCTAAGACCCAGCCGCAGGCCTGCAGTTCTGGCAGAAGGTGGCTGGTCAGGAGTTCTGGCAGAAGGTaGCTGGTCAGGAACTCTAGA +
Preference number: 4 (lower is better)
Translates to: EPKTQPQACSSGRRWLVRSSGRR*LVRNSR
Trigger: TCTAGAGTTCCTGACCAGCCACCTTCTGCCAGAACT...CCTGACCAGCCACCTTCTGCCAGAACTGCAGGCCTGCGGCTGGGTCTTAGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp CGTCCAAGGCCTCAGAGGAGCCCTGCCAGGACCTCAGTGCTTTGGAGGAGGTGGCAGTGGCTGTCATGTTaGGGCCTCAAAGTCACATCA +
Preference number: 4 (lower is better)
Translates to: RPRPQRSPARTSVLWRRWQWLSC*GLKVTS
Trigger: TGATGTGACTTTGAGGCCCCAACATGACAGCCACTG...CCACCTCCTCCAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGCCTTGGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp GAGCCTAAGACCCAGCCGCAGGCCTGCAGTTCTGGCAGAAGGTGGCTGGTCAGGCAGTGGCTGTCATGTTaGGGCCTCAAAGTCACATCA +
Preference number: 4 (lower is better)
Translates to: EPKTQPQACSSGRRWLVRQWLSC*GLKVTS
Trigger: TGATGTGACTTTGAGGCCCCAACATGACAGCCACTG...CCTGACCAGCCACCTTCTGCCAGAACTGCAGGCCTGCGGCTGGGTCTTAGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp TTAGGGGCAAGGGCAACACTGATGACTCCACGTCCTCGTCCAAGGCCTCAGAGGGACATGCACTCGGGATaGCCTGTGCCAGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: LGARATLMTPRPRPRPQRDMHSG*PVPEDG
Trigger: CCCATCTTCTGGCACAGGCCATCCCGAGTGCATGTC...CCTCTGAGGCCTTGGACGAGGACGTGGAGTCATCAGTGTTGCCCTTGCCCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp AGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAACGTGGCAGTGGCCGGTaGCTTCATGATCAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: RCNMRGSGRWLHDQCSGQRGSGR*LHDQCS
Trigger: ACTGCACTGATCATGAAGCCACCGGCCACTGCCACG...TTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp TGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTCGTGGCAGTGGCCGGTaGCTTCATGATCAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: WHRCNMRGSGRWLHDQCSRGSGR*LHDQCS
Trigger: ACTGCACTGATCATGAAGCCACCGGCCACTGCCACG...ACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp GTTCAAAACCAGCCACCGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCAGGTGCAACATGCGTaGCAGTGGCCGGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: VQNQPPASGTEKQLGDFLQVQHA*QWPVAS
Trigger: TGAAGCCACCGGCCACTGCCACGCATGTTGCACCTG...GAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGGTGGCTGGTTTTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp CCAGGCCCTGCACCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCGGACTGAGAAACAGCTaGGTGACTTCCTCCACCACG +
Preference number: 4 (lower is better)
Translates to: PGPAPSEGKHLSGQASCLGLRNS*VTSSTT
Trigger: CGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCC...GAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGTGCAGGGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp TATCTGGAGTTAGCAGGTAGGTGGATCAGGGCCAGCCCTGGTCCCTTAGCCCCCGGACTGAGAAACAGCTaGGTGACTTCCTCCACCACG +
Preference number: 4 (lower is better)
Translates to: YLELAGRWIRASPGPLAPGLRNS*VTSSTT
Trigger: CGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCC...GGGGGCTAAGGGACCAGGGCTGGCCCTGATCCACCTACCTGCTAACTCCAGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR TCA 90 bp CTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGGTCATCACCCCGCCTaGGGCGTTCTTCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: LIPLIPKLLDPVPQTRVPGHHPA*GVLPAQ
Trigger: CTGAGCAGGAAGAACGCCTCAGGCGGGGTGATGACC...AGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR TCA 90 bp ACCACTTCCCCAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCGCGACAGTCAGGGGTTaGGACTCAAAGGGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: TTSPKGVLWSRCFIVSTPATVRG*DSKGSG
Trigger: CCCTGACCCCTTTGAGTCTCAACCCCTGACTGTCGC...GGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTGGGGAAGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR TCA 90 bp CTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTAGGCCTGGTCACCAGTaGGTCCAGGTTCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: LIPLIPKLLDPVPQTRVPRPGHQ*VQVHQG
Trigger: GCCCTGGTGAACCTGGACTCACTGGTGACCAGGCCT...AGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR GCA 90 bp GGCGAGGGTCTGAGGGTTGGGGCTGTAAAGACAGCCCTTTCATCAGGAAGCTGGGCTCAGCCACTTCTCTaGTCATGGCAAGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GEGLRVGAVKTALSSGSWAQPLL*SWQVPA
Trigger: AGCTGGCACTTGCCATGAGCAGAGAAGTGGCTGAGC...CCAGCTTCCTGATGAAAGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR GCA 90 bp AGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAACTGAGGCGTTCTTCCTaGTCAGCCACTTCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: RCNMRGSGRWLHDQCSGQLRRSS*SATSLL
Trigger: GAGCAGAGAAGTGGCTGAGCAGGAAGAACGCCTCAG...TTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp GCAGCCCAGAGACCATTTAAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCTTCGGCGGGAGCACCTGGTaGCAGGAAAGGGTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: AAQRPFKISPVPVRRVIFGGSTW*QERVEG
Trigger: TCCCTCAACCCTTTCCTGGCACCAGGTGCTCCCGCC...GAAGATTACCCTTCGCACCGGCACAGGAGAGATCTTAAATGGTCTCTGGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR GCA 90 bp AGCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTGGCGGGAGCACCTGGTaGCAGGAAAGGGTTGAGGGA +
Preference number: 4 (lower is better)
Translates to: SPNTPNPQTLGSRPTDESGGSTW*QERVEG
Trigger: TCCCTCAACCCTTTCCTGGCACCAGGTGCTCCCGCC...ACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR GCA 90 bp CCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCCAGCACCATGTTCATCATTaGAGGGCCCAGTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: PNSWIPSHRRESLLGILQHHVHH*RAQWCQ
Trigger: CTGACACCACTGGGCCCTGCAATGATGAACATGGTG...CTGGAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR GCA 90 bp ATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCGGGGTATACCCACACTaGCCACCATGTTCATCATTG +
Preference number: 4 (lower is better)
Translates to: MSGCSPHSEPACPSSPETGVYPH*PPCSSL
Trigger: CAATGATGAACATGGTGGGCAGTGTGGGTATACCCC...GGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR GCA 90 bp CTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCCATCCCATTGCACCTGGAAAGGGTTGGTTGTaGCAGTGGCCTGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LKESTFLGKHPASHPIAPGKGWL*QWPGLL
Trigger: CAGCAGCCCAGGCCACTGGCACAACCAACCCTTTCC...AGGTGCAATGGGATGGGAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR GCA 90 bp AATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCGGAAAGGGTTGGTTGTaGCAGTGGCCTGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NTPNPQTLGSRPTDESPCGKGWL*QWPGLL
Trigger: CAGCAGCCCAGGCCACTGGCACAACCAACCCTTTCC...GCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR GCA 90 bp CTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTATCCTCCAGCACAGGTaGTCTGGGTGGGTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LIPLIPKLLDPVPQTRVPILQHR*SGWVPG
Trigger: GCCTGGGACCCACCCAGAGCACCTGTGCTGGAGGAT...AGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR GCA 90 bp CTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCCATCCCATTGCACCTGCCTCAGAGGAGCCCTaGCAGGACCTCAGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: LKESTFLGKHPASHPIAPASEEP*QDLSAL
Trigger: CAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGC...AGGTGCAATGGGATGGGAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR GCA 90 bp AGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAAGTCTTATGGAGCCGGTaGTTCATCGTGTCCACACCC +
Preference number: 4 (lower is better)
Translates to: RCNMRGSGRWLHDQCSGQVLWSR*FIVSTP
Trigger: GGGTGTGGACACGATGAAGCACCGGCTCCATAAGAC...TTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR GCA 90 bp TTAGGGGCAAGGGCAACACTGATGACTCCACGTCCTCGTCCAAGGCCTCAGAGGGTCTTATGGAGCCGGTaGTTCATCGTGTCCACACCC +
Preference number: 4 (lower is better)
Translates to: LGARATLMTPRPRPRPQRVLWSR*FIVSTP
Trigger: GGGTGTGGACACGATGAAGCACCGGCTCCATAAGAC...CCTCTGAGGCCTTGGACGAGGACGTGGAGTCATCAGTGTTGCCCTTGCCCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp TGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTCGCCCTCGGGACAACTaGCATTTCCACATTATCCCC +
Preference number: 4 (lower is better)
Translates to: WHRCNMRGSGRWLHDQCSRPRDN*HFHIIP
Trigger: GGGGATAATGTGGAAATGGCAGTTGTCCCGAGGGCG...ACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp GCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCGCACGATGGCACAGGTaGAACATGCGTGGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: ALIPLIPKLLDPVPQTRVARWHR*NMRGSG
Trigger: GCCACTGCCACGCATGTTGCACCTGTGCCATCGTGC...GACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp AGCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTGGCCCCACGGGTCATTaGAGGTGGCTTCCCGGACTT +
Preference number: 4 (lower is better)
Translates to: SPNTPNPQTLGSRPTDESGPTGH*RWLPGL
Trigger: AAGTCCGGGAAGCCACCTCCAATGACCCGTGGGGCC...ACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395620.6
CDS-3UTR CCA 90 bp GCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCTCTTCTCCACTAGTCTaGGGCCGGGCTTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ALIPLIPKLLDPVPQTRVSSPLV*GRACSS
Trigger: GCTGGAGCAAGCCCGGCCCCAGACTAGTGGAGAAGA...GACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp CAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCAGGACTGCCTCCGCGGGGCCCGAGCTaGGGAGAGCATCCATTAAAT +
Preference number: 4 (lower is better)
Translates to: QKVSYGAGASSCPHPGLPPRGPS*GEHPLN
Trigger: ATTTAATGGATGCTCTCCCCAGCTCGGGCCCCGCGG...AGGCAGTCCTGGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp CCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCCAGGTCAATGGAGGCAGCTaGCTTGGTACCAAACGATGG +
Preference number: 4 (lower is better)
Translates to: PNSWIPSHRRESLLGILQVNGGS*LGTKRW
Trigger: CCATCGTTTGGTACCAAGCCAGCTGCCTCCATTGAC...CTGGAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp GGCGAGGGTCTGAGGGTTGGGGCTGTAAAGACAGCCCTTTCATCAGGAAGCTGGAGGGGTCCGAGTTCTTaGGGACAGATTGTACGGTGG +
Preference number: 4 (lower is better)
Translates to: GEGLRVGAVKTALSSGSWRGPSS*GQIVRW
Trigger: CCACCGTACAATCTGTCCCCAAGAACTCGGACCCCT...CCAGCTTCCTGATGAAAGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp CAACATCCTGGAGACCCTCGGGCTGAGGTTAGGGGCAAGGGCAACACTGATGACCTCTTTTCCCAGCACTaGAGGCAGGCTGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: QHPGDPRAEVRGKGNTDDLFSQH*RQAAVK
Trigger: CTTCACAGCAGCCTGCCTCCAGTGCTGGGAAAAGAG...GTCATCAGTGTTGCCCTTGCCCCTAACCTCAGCCCGAGGGTCTCCAGGATGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp GGCGAGGGTCTGAGGGTTGGGGCTGTAAAGACAGCCCTTTCATCAGGAAGCTGGCTCTTTTCCCAGCACTaGAGGCAGGCTGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: GEGLRVGAVKTALSSGSWLFSQH*RQAAVK
Trigger: CTTCACAGCAGCCTGCCTCCAGTGCTGGGAAAAGAG...CCAGCTTCCTGATGAAAGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp GCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCATTTAAGATCTTTTCCGGGCACTGCTaGGCTTGCTTGAGGCGACAG +
Preference number: 4 (lower is better)
Translates to: AVPTQSLHVPAAQRPFKIFSGHC*ACLRRQ
Trigger: CTGTCGCCTCAAGCAAGCCCAGCAGTGCCCGGAAAA...GATCTTAAATGGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp CTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTCTGGTGGGGCAGGCCTaGTCACCAGTGAGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LIPLIPKLLDPVPQTRVPLVGQA*SPVSPG
Trigger: ACCTGGACTCACTGGTGACCAGGCCTGCCCCACCAG...AGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp CTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGGTGGCGGGAGCACCTaGTGCCAGGAAAGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: LIPLIPKLLDPVPQTRVPGGGST*CQERVE
Trigger: CTCAACCCTTTCCTGGCACCAGGTGCTCCCGCCACC...AGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp AGCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTGGTGGCGGGAGCACCTaGTGCCAGGAAAGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: SPNTPNPQTLGSRPTDESGGGST*CQERVE
Trigger: CTCAACCCTTTCCTGGCACCAGGTGCTCCCGCCACC...ACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp CTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTTCGAGGCCACAGCCATaGACTCCACTCCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LIPLIPKLLDPVPQTRVPSRPQP*TPLLGQ
Trigger: CTGGCCCAGGAGTGGAGTCCATGGCTGTGGCCTCGA...AGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp AGCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTTCGAGGCCACAGCCATaGACTCCACTCCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SPNTPNPQTLGSRPTDESSRPQP*TPLLGQ
Trigger: CTGGCCCAGGAGTGGAGTCCATGGCTGTGGCCTCGA...ACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp TGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTCATTGCAGGGCCCAGTaGTGTCAGAGAGGAACCAGT +
Preference number: 4 (lower is better)
Translates to: WHRCNMRGSGRWLHDQCSHCRAQ*CQRGTS
Trigger: ACTGGTTCCTCTCTGACACCACTGGGCCCTGCAATG...ACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp TTAGGGGCAAGGGCAACACTGATGACTCCACGTCCTCGTCCAAGGCCTCAGAGGCATTGCAGGGCCCAGTaGTGTCAGAGAGGAACCAGT +
Preference number: 4 (lower is better)
Translates to: LGARATLMTPRPRPRPQRHCRAQ*CQRGTS
Trigger: ACTGGTTCCTCTCTGACACCACTGGGCCCTGCAATG...CCTCTGAGGCCTTGGACGAGGACGTGGAGTCATCAGTGTTGCCCTTGCCCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp CTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGGTTGGTTGTGCCAGTaGCCTGGGCTGCTGATGGGG +
Preference number: 4 (lower is better)
Translates to: LIPLIPKLLDPVPQTRVPGWLCQ*PGLLMG
Trigger: CCCCATCAGCAGCCCAGGCCACTGGCACAACCAACC...AGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp AGCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTGGTTGGTTGTGCCAGTaGCCTGGGCTGCTGATGGGG +
Preference number: 4 (lower is better)
Translates to: SPNTPNPQTLGSRPTDESGWLCQ*PGLLMG
Trigger: CCCCATCAGCAGCCCAGGCCACTGGCACAACCAACC...ACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp GGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCTGGAGACAGAGAAGGAAAGGGTTaGTTGTGCCAGTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GQRQGHCPKSWARQHPGDREGKG*LCQWPG
Trigger: CCCAGGCCACTGGCACAACCAACCCTTTCCTTCTCT...GTCTCCAGGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp CCCCACCCTTCCCCCGGCAGACGAGACCAGCCACCGGCTTACCCAAATGGCAGCGAGAAATTCCCATGGTaGAAAAAGGGCCAGAAACAT +
Preference number: 4 (lower is better)
Translates to: PHPSPGRRDQPPAYPNGSEKFPW*KKGQKH
Trigger: ATGTTTCTGGCCCTTTTTCCACCATGGGAATTTCTC...GCTGCCATTTGGGTAAGCCGGTGGCTGGTCTCGTCTGCCGGGGGAAGGGTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp GGGATGGCCTGTGCCAGAAGATGGGGCAGGGGGCTGTCTTCTTGGGTCCCGGTGGGTGAGAAATTCCCATaGTGGAAAAAGGGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: GMACARRWGRGLSSWVPVGEKFP*WKKGQK
Trigger: TTTCTGGCCCTTTTTCCACCATGGGAATTTCTCACC...CACCGGGACCCAAGAAGACAGCCCCCTGCCCCATCTTCTGGCACAGGCCATCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp AGCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTTCTAGACACGGCTCCTaGGACTGGAGAGGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: SPNTPNPQTLGSRPTDESSRHGS*DWRGRP
Trigger: AGGCCGCCCTCTCCAGTCCCAGGAGCCGTGTCTAGA...ACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp GGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCTGGAGACAGGAAAGCACCTTTCTaGGCAAGCATCCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: GQRQGHCPKSWARQHPGDRKAPF*ASILPP
Trigger: GGGAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCT...GTCTCCAGGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp ATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCCAGTGGCTGTCATGTTaGGGCCTCAAAGTCACATCA +
Preference number: 4 (lower is better)
Translates to: MSGCSPHSEPACPSSPETQWLSC*GLKVTS
Trigger: TGATGTGACTTTGAGGCCCCAACATGACAGCCACTG...GGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp AGGGTAATCTTCTGGAACCAGAGAGGGGCTGGCAGGTGGTCAGCTGCCCTTAGACAGGAGGGAGCACGATaGCACAGGTGCAACATGCGT +
Preference number: 4 (lower is better)
Translates to: RVIFWNQRGAGRWSAALRQEGAR*HRCNMR
Trigger: ACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTG...TCTAAGGGCAGCTGACCACCTGCCAGCCCCTCTCTGGTTCCAGAAGATTACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp CCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCCAGAACTGGGGAGCTGAGTaGACATACCCAGCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: PNSWIPSHRRESLLGILQNWGAE*TYPASL
Trigger: TAAGGAGGCTGGGTATGTCCACTCAGCTCCCCAGTT...CTGGAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395620.6
CDS-3UTR TCA 90 bp CCAGCAGCCCAGAGACCATTTAAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCTGCCCGACACAGAAATaGACACTCTGCTCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: PAAQRPFKISPVPVRRVICPTQK*TLCSSG
Trigger: CCCGGAGGAGCAGAGTGTTCATTTCTGTGTCGGGCA...GATTACCCTTCGCACCGGCACAGGAGAGATCTTAAATGGTCTCTGGGCTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR TCA 90 bp CAACATCCTGGAGACCCTCGGGCTGAGGTTAGGGGCAAGGGCAACACTGATGACAAAAGCTGGAAGCCATaGCCAGGCTACAGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: QHPGDPRAEVRGKGNTDDKSWKP*PGYSEV
Trigger: GACCTCACTGTAGCCTGGTCATGGCTTCCAGCTTTT...GTCATCAGTGTTGCCCTTGCCCCTAACCTCAGCCCGAGGGTCTCCAGGATGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR TCA 90 bp GCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTTTTACAGTGGTGGGTaGGGTGAGGACAGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: ARWHRCNMRGSGRWLHDQFYSGG*GEDSRS
Trigger: ACTCCTACTGTCCTCACCTCACCCACCACTGTAAAA...CTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR TCA 90 bp GTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAACAGGGACATGCACTTTTACAGTGGTGGGTaGGGTGAGGACAGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: VAVAGGFMISAVGNRDMHFYSGG*GEDSRS
Trigger: ACTCCTACTGTCCTCACCTCACCCACCACTGTAAAA...GTGCATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp GCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCATTTAAGATCTCCAACAGCGTAGTCTaGTGTGGGAGAGAGCCATGC +
Preference number: 4 (lower is better)
Translates to: AVPTQSLHVPAAQRPFKISNSVV*CGREPC
Trigger: GCATGGCTCTCTCCCACAGCAGACTACGCTGTTGGA...GATCTTAAATGGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp AATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCGTGTTTTCCGGGCACTaGTGGGCTTGCTTGAGGCGA +
Preference number: 4 (lower is better)
Translates to: NTPNPQTLGSRPTDESPCVFSGH*WACLRR
Trigger: TCGCCTCAAGCAAGCCCAGCAGTGCCCGGAAAACAC...GCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR GCA 90 bp TCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCGGGGTATACCCACACTaGCCACCATGTTCATCATTG +
Preference number: 4 (lower is better)
Translates to: SPNSWIPSHRRESLLGILGVYPH*PPCSSL
Trigger: CAATGATGAACATGGTGGGCAGTGTGGGTATACCCC...GAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR GCA 90 bp CTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGGAAAGGGTTGGTTGTaGCAGTGGCCTGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LIPLIPKLLDPVPQTRVPGKGWL*QWPGLL
Trigger: CAGCAGCCCAGGCCACTGGCACAACCAACCCTTTCC...AGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR GCA 90 bp GCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCACAGACGAGAGTCCCTaGTCGGCATCCTCCAGCACA +
Preference number: 4 (lower is better)
Translates to: ALIPLIPKLLDPVPQTRVTDESP*SASSST
Trigger: TGTGCTGGAGGATGCCGAGCAGGGACTCTCGTCTGT...GACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR GCA 90 bp AATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCACAGACGAGAGTCCCTaGTCGGCATCCTCCAGCACA +
Preference number: 4 (lower is better)
Translates to: NTPNPQTLGSRPTDESPCTDESP*SASSST
Trigger: TGTGCTGGAGGATGCCGAGCAGGGACTCTCGTCTGT...GCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR GCA 90 bp AATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCCTGCCAGGACCTCAGTaGTTTGGAGGAGGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: NTPNPQTLGSRPTDESPCLPGPQ*FGGGGE
Trigger: CTCACCACCTCCTCCAAAGCACTGAGGTCCTGGCAG...GCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp AGCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTGCCTCAGAGGAGCCCTaGCAGGACCTCAGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SPNTPNPQTLGSRPTDESASEEP*QDLSAL
Trigger: CAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGC...ACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp CAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCAGGACTGCCTTCTGGGCAAGCATCCTaGCTCCCATCCCATTGCACC +
Preference number: 4 (lower is better)
Translates to: QKVSYGAGASSCPHPGLPSGQAS*LPSHCT
Trigger: GGTGCAATGGGATGGGAGGCAGGATGCTTGCCCAGA...AGGCAGTCCTGGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR GCA 90 bp CCAGCAGCCCAGAGACCATTTAAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCTCTGGGCAAGCATCCTaGCTCCCATCCCATTGCACC +
Preference number: 4 (lower is better)
Translates to: PAAQRPFKISPVPVRRVISGQAS*LPSHCT
Trigger: GGTGCAATGGGATGGGAGGCAGGATGCTTGCCCAGA...GATTACCCTTCGCACCGGCACAGGAGAGATCTTAAATGGTCTCTGGGCTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp AGCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTTGGGCAACAGGGACATaGACTCGGGATGGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: SPNTPNPQTLGSRPTDESWATGT*TRDGLC
Trigger: GCACAGGCCATCCCGAGTGCATGTCCCTGTTGCCCA...ACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp CTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTTCTTCTCCACTAGTCTaGGGCCGGGCTTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LIPLIPKLLDPVPQTRVPSSPLV*GRACSS
Trigger: GCTGGAGCAAGCCCGGCCCCAGACTAGTGGAGAAGA...AGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp CTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTCCGCGGGGCCCGAGCTaGGGAGAGCATCCATTAAAT +
Preference number: 4 (lower is better)
Translates to: LIPLIPKLLDPVPQTRVPPRGPS*GEHPLN
Trigger: ATTTAATGGATGCTCTCCCCAGCTCGGGCCCCGCGG...AGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp ACCACTTCCCCAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCTGGAGGCAGCTGGCTTaGTACCAAACGATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TTSPKGVLWSRCFIVSTPWRQLA*YQTMAR
Trigger: CCTGGCCATCGTTTGGTACCAAGCCAGCTGCCTCCA...GGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTGGGGAAGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp GCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCTGGAGGCAGCTGGCTTaGTACCAAACGATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ALIPLIPKLLDPVPQTRVWRQLA*YQTMAR
Trigger: CCTGGCCATCGTTTGGTACCAAGCCAGCTGCCTCCA...GACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp AGGCAGCTGGCTTGGTACCAAACGATGGCCAGGGGTCTGAAGTACTCGCAGGAGGTCAATGGAGGCAGCTaGCTTGGTACCAAACGATGG +
Preference number: 4 (lower is better)
Translates to: RQLAWYQTMARGLKYSQEVNGGS*LGTKRW
Trigger: CCATCGTTTGGTACCAAGCCAGCTGCCTCCATTGAC...CTCCTGCGAGTACTTCAGACCCCTGGCCATCGTTTGGTACCAAGCCAGCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580579.5
CDS-3UTR CCA 90 bp AGGGTAATCTTCTGGAACCAGAGAGGGGCTGGCAGGTGGTCAGCTGCCCTTAGACTCTTTTCCCAGCACTaGAGGCAGGCTGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: RVIFWNQRGAGRWSAALRLFSQH*RQAAVK
Trigger: CTTCACAGCAGCCTGCCTCCAGTGCTGGGAAAAGAG...TCTAAGGGCAGCTGACCACCTGCCAGCCCCTCTCTGGTTCCAGAAGATTACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp CAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCAGGACTGCCTTTTTCCGGGCACTGCTaGGCTTGCTTGAGGCGACAG +
Preference number: 4 (lower is better)
Translates to: QKVSYGAGASSCPHPGLPFSGHC*ACLRRQ
Trigger: CTGTCGCCTCAAGCAAGCCCAGCAGTGCCCGGAAAA...AGGCAGTCCTGGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp AATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCGTCAGCGGCTGGGGCTaGTTCACCTGGAAAGGGTTA +
Preference number: 4 (lower is better)
Translates to: NTPNPQTLGSRPTDESPCVSGWG*FTWKGL
Trigger: TAACCCTTTCCAGGTGAACCAGCCCCAGCCGCTGAC...GCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp AGCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTTCAGAGAGGAACCAGTaGCCCCCAGAGCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SPNTPNPQTLGSRPTDESSERNQ*PPELAV
Trigger: CACAGCCAGCTCTGGGGGCCACTGGTTCCTCTCTGA...ACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp CTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTTCAGAGAGGAACCAGTaGCCCCCAGAGCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LIPLIPKLLDPVPQTRVPSERNQ*PPELAV
Trigger: CACAGCCAGCTCTGGGGGCCACTGGTTCCTCTCTGA...AGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp GGGGAGGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCTGCCAAAAGGTGTCTTATaGAGCCGGTGCTTCATCGTG +
Preference number: 4 (lower is better)
Translates to: GEDKDKATVPSPGPGNILPKGVL*SRCFIV
Trigger: CACGATGAAGCACCGGCTCCATAAGACACCTTTTGG...CAGGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp GTTCAAAACCAGCCACCGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCTGGCAGAAGGTGGCTaGTCAGGAACTCTAGACACG +
Preference number: 4 (lower is better)
Translates to: VQNQPPASGTEKQLGDFLLAEGG*SGTLDT
Trigger: CGTGTCTAGAGTTCCTGACCAGCCACCTTCTGCCAG...GAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGGTGGCTGGTTTTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp GCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCATTTAAGATCAGGAAAGCACCTTTCTaGGCAAGCATCCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: AVPTQSLHVPAAQRPFKIRKAPF*ASILPP
Trigger: GGGAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCT...GATCTTAAATGGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp CCAGCAGCCCAGAGACCATTTAAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCCAGGAGGGAGCACGATaGCACAGGTGCAACATGCGT +
Preference number: 4 (lower is better)
Translates to: PAAQRPFKISPVPVRRVIQEGAR*HRCNMR
Trigger: ACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTG...GATTACCCTTCGCACCGGCACAGGAGAGATCTTAAATGGTCTCTGGGCTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR TCA 90 bp CCCCACCCTTCCCCCGGCAGACGAGACCAGCCACCGGCTTACCCAAATGGCAGCTCTAGCCAAAAAGGCTaGAAGTCAATCAGTTTAGTA +
Preference number: 4 (lower is better)
Translates to: PHPSPGRRDQPPAYPNGSSSQKG*KSISLV
Trigger: TACTAAACTGATTGACTTTCAGCCTTTTTGGCTAGA...GCTGCCATTTGGGTAAGCCGGTGGCTGGTCTCGTCTGCCGGGGGAAGGGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR TCA 90 bp GCAGCCCAGAGACCATTTAAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCTTCAGGCCCTGCACCGTCTaGAGGAAAGCACCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: AAQRPFKISPVPVRRVIFRPCTV*RKAPFW
Trigger: CCAGAAAGGTGCTTTCCTTCAGACGGTGCAGGGCCT...GAAGATTACCCTTCGCACCGGCACAGGAGAGATCTTAAATGGTCTCTGGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR TCA 90 bp CCACGTCCTCGTCCAAGGCCTCAGAGGAGCCCTGCCAGGACCTCAGTGCTTTGGTTACAAAAGAATCACTaGCCCCAAGTAGTCGAGTCT +
Preference number: 4 (lower is better)
Translates to: PRPRPRPQRSPARTSVLWLQKNH*PQVVES
Trigger: AGACTCGACTACTTGGGGTCAGTGATTCTTTTGTAA...CCAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGCCTTGGACGAGGACGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR TCA 90 bp CCCCACCCTTCCCCCGGCAGACGAGACCAGCCACCGGCTTACCCAAATGGCAGCCTCAAAGTCACATCATaGAAGACTCGTTACAAAAGA +
Preference number: 4 (lower is better)
Translates to: PHPSPGRRDQPPAYPNGSLKVTS*KTRYKR
Trigger: TCTTTTGTAACGAGTCTTTCATGATGTGACTTTGAG...GCTGCCATTTGGGTAAGCCGGTGGCTGGTCTCGTCTGCCGGGGGAAGGGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp CCTCCACCACGGTGCCCATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGACGATGTTTTTCATCTaGCGTCTGATAGACGAAGTC +
Preference number: 4 (lower is better)
Translates to: PPPRCPSGGSTMAQVQHATMFFI*RLIDEV
Trigger: GACTTCGTCTATCAGACGGCAGATGAAAAACATCGT...CGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGATGGGCACCGTGGTGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp CAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCAGGACTGCCTTCCAACAGCGTAGTCTaGTGTGGGAGAGAGCCATGC +
Preference number: 4 (lower is better)
Translates to: QKVSYGAGASSCPHPGLPSNSVV*CGREPC
Trigger: GCATGGCTCTCTCCCACAGCAGACTACGCTGTTGGA...AGGCAGTCCTGGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp CTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTACAGACGAGAGTCCCTaGTCGGCATCCTCCAGCACA +
Preference number: 4 (lower is better)
Translates to: LIPLIPKLLDPVPQTRVPTDESP*SASSST
Trigger: TGTGCTGGAGGATGCCGAGCAGGGACTCTCGTCTGT...AGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR GCA 90 bp AGCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTACAGACGAGAGTCCCTaGTCGGCATCCTCCAGCACA +
Preference number: 4 (lower is better)
Translates to: SPNTPNPQTLGSRPTDESTDESP*SASSST
Trigger: TGTGCTGGAGGATGCCGAGCAGGGACTCTCGTCTGT...ACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR GCA 90 bp ACCACTTCCCCAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCGTCTTATGGAGCCGGTaGTTCATCGTGTCCACACCC +
Preference number: 4 (lower is better)
Translates to: TTSPKGVLWSRCFIVSTPVLWSR*FIVSTP
Trigger: GGGTGTGGACACGATGAAGCACCGGCTCCATAAGAC...GGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTGGGGAAGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp AATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCGTCTTATGGAGCCGGTaGTTCATCGTGTCCACACCC +
Preference number: 4 (lower is better)
Translates to: NTPNPQTLGSRPTDESPCVLWSR*FIVSTP
Trigger: GGGTGTGGACACGATGAAGCACCGGCTCCATAAGAC...GCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp GCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCGCCCTCGGGACAACTaGCATTTCCACATTATCCCC +
Preference number: 4 (lower is better)
Translates to: ALIPLIPKLLDPVPQTRVRPRDN*HFHIIP
Trigger: GGGGATAATGTGGAAATGGCAGTTGTCCCGAGGGCG...GACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR GCA 90 bp GGGGAGGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCTGGTAATCCCAGCACTTTaGGAAGCTGAAATGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GEDKDKATVPSPGPGNILVIPAL*EAEMGG
Trigger: TCCTCCCATTTCAGCTTCGCAAAGTGCTGGGATTAC...CAGGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395620.6
CDS-3UTR CCA 90 bp GCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCATTTAAGATCCAGCGTAGTCTGCTGTaGGAGAGAGCCATGCTCTTT +
Preference number: 4 (lower is better)
Translates to: AVPTQSLHVPAAQRPFKIQRSLL*ERAMLF
Trigger: AAAGAGCATGGCTCTCTCCCACAGCAGACTACGCTG...GATCTTAAATGGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp ATGGAGGCAGCTGGCTTGGTACCAAACGATGGCCAGGGGTCTGAAGTACTCGCACAGCGTAGTCTGCTGTaGGAGAGAGCCATGCTCTTT +
Preference number: 4 (lower is better)
Translates to: MEAAGLVPNDGQGSEVLAQRSLL*ERAMLF
Trigger: AAAGAGCATGGCTCTCTCCCACAGCAGACTACGCTG...TGCGAGTACTTCAGACCCCTGGCCATCGTTTGGTACCAAGCCAGCTGCCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580579.5
CDS-3UTR CCA 90 bp CTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTTGGAGGCAGCTGGCTTaGTACCAAACGATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LIPLIPKLLDPVPQTRVPWRQLA*YQTMAR
Trigger: CCTGGCCATCGTTTGGTACCAAGCCAGCTGCCTCCA...AGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp AGCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTTGGAGGCAGCTGGCTTaGTACCAAACGATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SPNTPNPQTLGSRPTDESWRQLA*YQTMAR
Trigger: CCTGGCCATCGTTTGGTACCAAGCCAGCTGCCTCCA...ACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp AATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCCTCTTTTCCCAGCACTaGAGGCAGGCTGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: NTPNPQTLGSRPTDESPCLFSQH*RQAAVK
Trigger: CTTCACAGCAGCCTGCCTCCAGTGCTGGGAAAAGAG...GCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp CTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTTTTTCCGGGCACTGCTaGGCTTGCTTGAGGCGACAG +
Preference number: 4 (lower is better)
Translates to: LIPLIPKLLDPVPQTRVPFSGHC*ACLRRQ
Trigger: CTGTCGCCTCAAGCAAGCCCAGCAGTGCCCGGAAAA...AGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp GCAGCCCAGAGACCATTTAAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCTTCGTCAGCGGCTGGGGCTaGTTCACCTGGAAAGGGTTA +
Preference number: 4 (lower is better)
Translates to: AAQRPFKISPVPVRRVIFVSGWG*FTWKGL
Trigger: TAACCCTTTCCAGGTGAACCAGCCCCAGCCGCTGAC...GAAGATTACCCTTCGCACCGGCACAGGAGAGATCTTAAATGGTCTCTGGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp CCCTTAGAGCTAGAGGTGAGAAATTCCCATGGTGGAAAAAGGGCCAGAAACATCGGGCTCCCCCGAAGCTaGTTCAGTGTCAGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: PLELEVRNSHGGKRARNIGLPRS*FSVSGW
Trigger: CCAGCCGCTGACACTGAACCAGCTTCGGGGGAGCCC...GATGTTTCTGGCCCTTTTTCCACCATGGGAATTTCTCACCTCTAGCTCTAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp CTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTCATGGACTCCACTCCTaGGCCAGGCCCAAAGGATGT +
Preference number: 4 (lower is better)
Translates to: LIPLIPKLLDPVPQTRVPHGLHS*ARPKGC
Trigger: ACATCCTTTGGGCCTGGCCCAGGAGTGGAGTCCATG...AGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp GCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCATTGCAGGGCCCAGTaGTGTCAGAGAGGAACCAGT +
Preference number: 4 (lower is better)
Translates to: ALIPLIPKLLDPVPQTRVHCRAQ*CQRGTS
Trigger: ACTGGTTCCTCTCTGACACCACTGGGCCCTGCAATG...GACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp AATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCAGAGAAGGAAAGGGTTaGTTGTGCCAGTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: NTPNPQTLGSRPTDESPCREGKG*LCQWPG
Trigger: CCCAGGCCACTGGCACAACCAACCCTTTCCTTCTCT...GCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp AGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAACCAAAAGGTGTCTTATaGAGCCGGTGCTTCATCGTG +
Preference number: 4 (lower is better)
Translates to: RCNMRGSGRWLHDQCSGQPKGVL*SRCFIV
Trigger: CACGATGAAGCACCGGCTCCATAAGACACCTTTTGG...TTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp CAACATCCTGGAGACCCTCGGGCTGAGGTTAGGGGCAAGGGCAACACTGATGACCCAAAAGGTGTCTTATaGAGCCGGTGCTTCATCGTG +
Preference number: 4 (lower is better)
Translates to: QHPGDPRAEVRGKGNTDDPKGVL*SRCFIV
Trigger: CACGATGAAGCACCGGCTCCATAAGACACCTTTTGG...GTCATCAGTGTTGCCCTTGCCCCTAACCTCAGCCCGAGGGTCTCCAGGATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp GCCCAGGCCCTGCACCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCGGTGAGAAATTCCCATaGTGGAAAAAGGGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: AQALHRLKESTFLGKHPAGEKFP*WKKGQK
Trigger: TTTCTGGCCCTTTTTCCACCATGGGAATTTCTCACC...GGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGTGCAGGGCCTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp CAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCAGGACTGCCTCGAAGGGTAATCTTCTaGAACCAGAGAGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: QKVSYGAGASSCPHPGLPRRVIF*NQRGAG
Trigger: GCCAGCCCCTCTCTGGTTCCAGAAGATTACCCTTCG...AGGCAGTCCTGGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp ACCACTTCCCCAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCCAGGAACAGCATGAGTaGGTGCAGTCCCCACTCAGA +
Preference number: 4 (lower is better)
Translates to: TTSPKGVLWSRCFIVSTPQEQHE*VQSPLR
Trigger: TCTGAGTGGGGACTGCACCCACTCATGCTGTTCCTG...GGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTGGGGAAGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp AGCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTACCGGCTTACCCAAATaGCAGCGGGAGCCTAAGACC +
Preference number: 4 (lower is better)
Translates to: SPNTPNPQTLGSRPTDESTGLPK*QREPKT
Trigger: GGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGT...ACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp CTGGCAGGTGGTCAGCTGCCCTTAGAGCTAGAGGTGAGAAATTCCCATGGTGGAGGACTGAGAAACAGCTaGGTGACTTCCTCCACCACG +
Preference number: 4 (lower is better)
Translates to: LAGGQLPLELEVRNSHGGGLRNS*VTSSTT
Trigger: CGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCC...TCCACCATGGGAATTTCTCACCTCTAGCTCTAAGGGCAGCTGACCACCTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp TCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCTGTCTTTTCACTGCCTaGCAAAAGCCAGCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: SPNSWIPSHRRESLLGILCLFTA*QKPAVE
Trigger: TTCCACAGCTGGCTTTTGCCAGGCAGTGAAAAGACA...GAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395620.6
CDS-3UTR TCA 90 bp AGGGTAATCTTCTGGAACCAGAGAGGGGCTGGCAGGTGGTCAGCTGCCCTTAGATCCACGTCTCTGATATaGGGCTCCTGTCCACAAGTT +
Preference number: 4 (lower is better)
Translates to: RVIFWNQRGAGRWSAALRSTSLI*GSCPQV
Trigger: AACTTGTGGACAGGAGCCTCATATCAGAGACGTGGA...TCTAAGGGCAGCTGACCACCTGCCAGCCCCTCTCTGGTTCCAGAAGATTACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR TCA 90 bp CCAGGCCCTGCACCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCTACCATTCAGATTACTaGAGAGCTCAAAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: PGPAPSEGKHLSGQASCLYHSDY*RAQRTQ
Trigger: CTGGGTCCTTTGAGCTCTTCAGTAATCTGAATGGTA...GAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGTGCAGGGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR TCA 90 bp GCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTACCATTCAGATTACTaGAGAGCTCAAAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: ARWHRCNMRGSGRWLHDQYHSDY*RAQRTQ
Trigger: CTGGGTCCTTTGAGCTCTTCAGTAATCTGAATGGTA...CTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR TCA 90 bp GGGGAGGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCTGTACCATTCAGATTACTaGAGAGCTCAAAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: GEDKDKATVPSPGPGNILYHSDY*RAQRTQ
Trigger: CTGGGTCCTTTGAGCTCTTCAGTAATCTGAATGGTA...CAGGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR TCA 90 bp AGGGTAATCTTCTGGAACCAGAGAGGGGCTGGCAGGTGGTCAGCTGCCCTTAGATTTTACAGTGGTGGGTaGGGTGAGGACAGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: RVIFWNQRGAGRWSAALRFYSGG*GEDSRS
Trigger: ACTCCTACTGTCCTCACCTCACCCACCACTGTAAAA...TCTAAGGGCAGCTGACCACCTGCCAGCCCCTCTCTGGTTCCAGAAGATTACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR TCA 90 bp GGGATGGCCTGTGCCAGAAGATGGGGCAGGGGGCTGTCTTCTTGGGTCCCGGTGCTCAAAGTCACATCATaGAAGACTCGTTACAAAAGA +
Preference number: 4 (lower is better)
Translates to: GMACARRWGRGLSSWVPVLKVTS*KTRYKR
Trigger: TCTTTTGTAACGAGTCTTTCATGATGTGACTTTGAG...CACCGGGACCCAAGAAGACAGCCCCCTGCCCCATCTTCTGGCACAGGCCATCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp AGCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCTGAGGCGTTCTTCCTaGTCAGCCACTTCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SPNTPNPQTLGSRPTDESLRRSS*SATSLL
Trigger: GAGCAGAGAAGTGGCTGAGCAGGAAGAACGCCTCAG...ACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR GCA 90 bp CAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCAGGACTGCCTCACCATGTTCATCATTaGAGGGCCCAGTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: QKVSYGAGASSCPHPGLPHHVHH*RAQWCQ
Trigger: CTGACACCACTGGGCCCTGCAATGATGAACATGGTG...AGGCAGTCCTGGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp AATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCCACCATGTTCATCATTaGAGGGCCCAGTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: NTPNPQTLGSRPTDESPCHHVHH*RAQWCQ
Trigger: CTGACACCACTGGGCCCTGCAATGATGAACATGGTG...GCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp CTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCCATCCCATTGCACCTCAGCGTAGTCTGCTGTaGGAGAGAGCCATGCTCTTT +
Preference number: 4 (lower is better)
Translates to: LKESTFLGKHPASHPIAPQRSLL*ERAMLF
Trigger: AAAGAGCATGGCTCTCTCCCACAGCAGACTACGCTG...AGGTGCAATGGGATGGGAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp ACCACTTCCCCAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCCAGCGTAGTCTGCTGTaGGAGAGAGCCATGCTCTTT +
Preference number: 4 (lower is better)
Translates to: TTSPKGVLWSRCFIVSTPQRSLL*ERAMLF
Trigger: AAAGAGCATGGCTCTCTCCCACAGCAGACTACGCTG...GGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTGGGGAAGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp AATTCAAGAGTTGTCCACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAACAGGGCTCTGCTTTCTaGGCCGCGGGGCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: NSRVVHGGGVYFELTRVKQGSAF*AAGPEL
Trigger: CAGCTCGGGCCCCGCGGCCCAGAAAGCAGAGCCCTG...TTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGTGGACAACTCTTGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp CTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCCATCCCATTGCACCTGTCAATGGAGGCAGCTaGCTTGGTACCAAACGATGG +
Preference number: 4 (lower is better)
Translates to: LKESTFLGKHPASHPIAPVNGGS*LGTKRW
Trigger: CCATCGTTTGGTACCAAGCCAGCTGCCTCCATTGAC...AGGTGCAATGGGATGGGAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp AGCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTTTCAGTGTCAGCGGCTaGGGCTGGTTCACCTGGAAA +
Preference number: 4 (lower is better)
Translates to: SPNTPNPQTLGSRPTDESFSVSG*GWFTWK
Trigger: TTTCCAGGTGAACCAGCCCCAGCCGCTGACACTGAA...ACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp CTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTCATTGCAGGGCCCAGTaGTGTCAGAGAGGAACCAGT +
Preference number: 4 (lower is better)
Translates to: LIPLIPKLLDPVPQTRVPHCRAQ*CQRGTS
Trigger: ACTGGTTCCTCTCTGACACCACTGGGCCCTGCAATG...AGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CCA 90 bp CCCTTAGAGCTAGAGGTGAGAAATTCCCATGGTGGAAAAAGGGCCAGAAACATCGAACCAGAGAGGGGCTaGCAGGTGGTCAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: PLELEVRNSHGGKRARNIEPERG*QVVSCP
Trigger: AGGGCAGCTGACCACCTGCCAGCCCCTCTCTGGTTC...GATGTTTCTGGCCCTTTTTCCACCATGGGAATTTCTCACCTCTAGCTCTAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp GCAGCCCAGAGACCATTTAAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCTTCCAGGAACAGCATGAGTaGGTGCAGTCCCCACTCAGA +
Preference number: 4 (lower is better)
Translates to: AAQRPFKISPVPVRRVIFQEQHE*VQSPLR
Trigger: TCTGAGTGGGGACTGCACCCACTCATGCTGTTCCTG...GAAGATTACCCTTCGCACCGGCACAGGAGAGATCTTAAATGGTCTCTGGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp CCACGTCCTCGTCCAAGGCCTCAGAGGAGCCCTGCCAGGACCTCAGTGCTTTGGACACTTCCACTGGAATaGCTATTTTATGGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: PRPRPRPQRSPARTSVLWTLPLE*LFYGLS
Trigger: AGACAACCCATAAAATAGCCATTCCAGTGGAAGTGT...CCAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGCCTTGGACGAGGACGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395620.6
CDS-3UTR CCA 90 bp TTAATTCAAGAGTTGTCCACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAACACTCGCGGGGAGGTaGCTCTGCTCCTCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: LIQELSTVVVFTLNSHESTLAGR*LCSSGP
Trigger: CGGCCCGGAGGAGCAGAGCCACCTCCCCGCGAGTGT...TGACTCGTGTGAGTTCAAAGTAAACACCACCACCGTGGACAACTCTTGAATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395618.7
CDS-3UTR TCA 90 bp AATTCAAGAGTTGTCCACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAAGGAGGCAGGCTGCTGTaGAGCTGCCCAGGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: NSRVVHGGGVYFELTRVKGGRLL*SCPGVR
Trigger: TCGGACCCCTGGGCAGCTTCACAGCAGCCTGCCTCC...TTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGTGGACAACTCTTGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR TCA 90 bp GGCGAGGGTCTGAGGGTTGGGGCTGTAAAGACAGCCCTTTCATCAGGAAGCTGGTACCATTCAGATTACTaGAGAGCTCAAAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: GEGLRVGAVKTALSSGSWYHSDY*RAQRTQ
Trigger: CTGGGTCCTTTGAGCTCTTCAGTAATCTGAATGGTA...CCAGCTTCCTGATGAAAGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR TCA 90 bp TCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCTGGTGGTGTTTACTTTaGACTCACACGAGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: SPNSWIPSHRRESLLGILWWCLL*THTSQR
Trigger: TCTTTGACTCGTGTGAGTTCAAAGTAAACACCACCA...GAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR TCA 90 bp GCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCAATGGGAGGATTACTTaGGGCCAGCCTGGTCAAAAC +
Preference number: 4 (lower is better)
Translates to: ALIPLIPKLLDPVPQTRVNGRIT*GQPGQN
Trigger: GTTTTGACCAGGCTGGCCTCAAGTAATCCTCCCATT...GACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395620.6
CDS-3UTR GCA 90 bp CCCTTAGAGCTAGAGGTGAGAAATTCCCATGGTGGAAAAAGGGCCAGAAACATCTCCCCACTCAGAGCCTaGATGTCCCAGCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: PLELEVRNSHGGKRARNISPLRA*MSQQPR
Trigger: TCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGA...GATGTTTCTGGCCCTTTTTCCACCATGGGAATTTCTCACCTCTAGCTCTAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp CTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTCAGCGTAGTCTGCTGTaGGAGAGAGCCATGCTCTTT +
Preference number: 4 (lower is better)
Translates to: LIPLIPKLLDPVPQTRVPQRSLL*ERAMLF
Trigger: AAAGAGCATGGCTCTCTCCCACAGCAGACTACGCTG...AGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp ACACGTGCCAACATCTTCATTCAGCCAGACCTGGTAAATTCTATCAAAACTAGACAGGGCTCTGCTTTCTaGGCCGCGGGGCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: TRANIFIQPDLVNSIKTRQGSAF*AAGPEL
Trigger: CAGCTCGGGCCCCGCGGCCCAGAAAGCAGAGCCCTG...TCTAGTTTTGATAGAATTTACCAGGTCTGGCTGAATGAAGATGTTGGCACGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp GAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATAGGACAGTAGGAGTTTaGAAGAGGGAGGTAATATTA +
Preference number: 4 (lower is better)
Translates to: EGARWHRCNMRGSGRWLHRTVGV*KREVIL
Trigger: TAATATTACCTCCCTCTTCCAAACTCCTACTGTCCT...ATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp CAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCAGGACTGCCTTACTTGAGGCCAGCCTaGTCAAAACAGCAATACCCC +
Preference number: 4 (lower is better)
Translates to: QKVSYGAGASSCPHPGLPYLRPA*SKQQYP
Trigger: GGGGTATTGCTGTTTTGACCAGGCTGGCCTCAAGTA...AGGCAGTCCTGGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395620.6
CDS-3UTR CCA 90 bp ACCACTTCCCCAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCGGCAAAAGCCAGCTGTaGAAGAATCGGAAACACTGG +
Preference number: 4 (lower is better)
Translates to: TTSPKGVLWSRCFIVSTPGKSQL*KNRKHW
Trigger: CCAGTGTTTCCGATTCTTCCACAGCTGGCTTTTGCC...GGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTGGGGAAGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395620.6
CDS-3UTR CCA 90 bp CCACGTCCTCGTCCAAGGCCTCAGAGGAGCCCTGCCAGGACCTCAGTGCTTTGGTCAAAACACTTCCACTaGAATGGCTATTTTATGGGT +
Preference number: 4 (lower is better)
Translates to: PRPRPRPQRSPARTSVLWSKHFH*NGYFMG
Trigger: ACCCATAAAATAGCCATTCCAGTGGAAGTGTTTTGA...CCAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGCCTTGGACGAGGACGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395620.6
CDS-3UTR TCA 90 bp TTAATTCAAGAGTTGTCCACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCACGATGGCCAGGGGTCTaGAGTACTCGCAGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: LIQELSTVVVFTLNSHESRWPGV*STRRSR
Trigger: GCGGCTCCTGCGAGTACTTCAGACCCCTGGCCATCG...TGACTCGTGTGAGTTCAAAGTAAACACCACCACCGTGGACAACTCTTGAATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR TCA 90 bp GGCGAGGGTCTGAGGGTTGGGGCTGTAAAGACAGCCCTTTCATCAGGAAGCTGGAAAAGCTGGAAGCCATaGCCTAGAGAAAGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: GEGLRVGAVKTALSSGSWKSWKP*PREREN
Trigger: GTTTTCTCTTTCTCTAGGTCATGGCTTCCAGCTTTT...CCAGCTTCCTGATGAAAGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395620.6
CDS-3UTR GCA 90 bp TTAGGGGCAAGGGCAACACTGATGACTCCACGTCCTCGTCCAAGGCCTCAGAGGACGATGTTTTTCATCTaGCGTCTGATAGACGAAGTC +
Preference number: 4 (lower is better)
Translates to: LGARATLMTPRPRPRPQRTMFFI*RLIDEV
Trigger: GACTTCGTCTATCAGACGGCAGATGAAAAACATCGT...CCTCTGAGGCCTTGGACGAGGACGTGGAGTCATCAGTGTTGCCCTTGCCCCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395620.6
CDS-3UTR GCA 90 bp CTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGGGGTATACCCACACTaGCCACCATGTTCATCATTG +
Preference number: 4 (lower is better)
Translates to: LIPLIPKLLDPVPQTRVPGVYPH*PPCSSL
Trigger: CAATGATGAACATGGTGGGCAGTGTGGGTATACCCC...AGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR GCA 90 bp CCCTTAGAGCTAGAGGTGAGAAATTCCCATGGTGGAAAAAGGGCCAGAAACATCATCCACCAGGCAAGCTaGCCAGACACAGGATTGGGG +
Preference number: 4 (lower is better)
Translates to: PLELEVRNSHGGKRARNIIHQAS*PDTGLG
Trigger: CCCCAATCCTGTGTCTGGGCAGCTTGCCTGGTGGAT...GATGTTTCTGGCCCTTTTTCCACCATGGGAATTTCTCACCTCTAGCTCTAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp GCTCAGATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACCAGGGCTCTGCTTTCTaGGCCGCGGGGCCCGAGCTG +
Preference number: 4 (lower is better)
Translates to: AQISFKARSSGFNSRVVHQGSAF*AAGPEL
Trigger: CAGCTCGGGCCCCGCGGCCCAGAAAGCAGAGCCCTG...GTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAATCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp CCCTTAGAGCTAGAGGTGAGAAATTCCCATGGTGGAAAAAGGGCCAGAAACATCTGGGGCTGGTTCACCTaGAAAGGGTTAACAGGGGCC +
Preference number: 4 (lower is better)
Translates to: PLELEVRNSHGGKRARNIWGWFT*KGLTGA
Trigger: GGCCCCTGTTAACCCTTTCCAGGTGAACCAGCCCCA...GATGTTTCTGGCCCTTTTTCCACCATGGGAATTTCTCACCTCTAGCTCTAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp GTGGGGAGGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCAGGACAGTAGGAGTTTaGAAGAGGGAGGTAATATTA +
Preference number: 4 (lower is better)
Translates to: VGRTKTRPLSQVLGQATSRTVGV*KREVIL
Trigger: TAATATTACCTCCCTCTTCCAAACTCCTACTGTCCT...GGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp TGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGAGAAATTCCCATGGTaGAAAAAGGGCCAGAAACAT +
Preference number: 4 (lower is better)
Translates to: WHRCNMRGSGRWLHDQCSEKFPW*KKGQKH
Trigger: ATGTTTCTGGCCCTTTTTCCACCATGGGAATTTCTC...ACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp AGCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTAGTTCTGGCAGAAGGTaGCTGGTCAGGAACTCTAGA +
Preference number: 4 (lower is better)
Translates to: SPNTPNPQTLGSRPTDESSSGRR*LVRNSR
Trigger: TCTAGAGTTCCTGACCAGCCACCTTCTGCCAGAACT...ACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp GCAGCCCAGAGACCATTTAAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCTTCAGTTCTGGCAGAAGGTaGCTGGTCAGGAACTCTAGA +
Preference number: 4 (lower is better)
Translates to: AAQRPFKISPVPVRRVIFSSGRR*LVRNSR
Trigger: TCTAGAGTTCCTGACCAGCCACCTTCTGCCAGAACT...GAAGATTACCCTTCGCACCGGCACAGGAGAGATCTTAAATGGTCTCTGGGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp CCCTTAGAGCTAGAGGTGAGAAATTCCCATGGTGGAAAAAGGGCCAGAAACATCGACATGCACTCGGGATaGCCTGTGCCAGAAGATGGG +
Preference number: 4 (lower is better)
Translates to: PLELEVRNSHGGKRARNIDMHSG*PVPEDG
Trigger: CCCATCTTCTGGCACAGGCCATCCCGAGTGCATGTC...GATGTTTCTGGCCCTTTTTCCACCATGGGAATTTCTCACCTCTAGCTCTAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp TTAGGGGCAAGGGCAACACTGATGACTCCACGTCCTCGTCCAAGGCCTCAGAGGCCTTCAAAACTGCTTTaGTCCACTGTGTTTCCGAAT +
Preference number: 4 (lower is better)
Translates to: LGARATLMTPRPRPRPQRPSKLL*STVFPN
Trigger: ATTCGGAAACACAGTGGACCAAAGCAGTTTTGAAGG...CCTCTGAGGCCTTGGACGAGGACGTGGAGTCATCAGTGTTGCCCTTGCCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395620.6
CDS-3UTR TCA 90 bp ATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACGGTGGTCTGGTTAGTGGAGGCTaGCGGGCCCCAGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: ISFKARSSGFNSRVVHGGLVSGG*RAPGLC
Trigger: GCAGAGCCCTGGGGCCCGTCAGCCTCCACTAACCAG...ACCACCGTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR TCA 90 bp AATTCAAGAGTTGTCCACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAAAGGCCTGGTCACCAGTaGGTCCAGGTTCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: NSRVVHGGGVYFELTRVKRPGHQ*VQVHQG
Trigger: GCCCTGGTGAACCTGGACTCACTGGTGACCAGGCCT...TTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGTGGACAACTCTTGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp AATTCAAGAGTTGTCCACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAAGGGCACTGCTGGGCTTaGTTGAGGCGACAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: NSRVVHGGGVYFELTRVKGHCWA*LRRQSG
Trigger: CCCTGACTGTCGCCTCAAGCAAGCCCAGCAGTGCCC...TTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGTGGACAACTCTTGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp TTAATTCAAGAGTTGTCCACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAGGGCACTGCTGGGCTTaGTTGAGGCGACAGTCAGGG +
Preference number: 4 (lower is better)
Translates to: LIQELSTVVVFTLNSHESGHCWA*LRRQSG
Trigger: CCCTGACTGTCGCCTCAAGCAAGCCCAGCAGTGCCC...TGACTCGTGTGAGTTCAAAGTAAACACCACCACCGTGGACAACTCTTGAATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp AATTCAAGAGTTGTCCACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAAATCCTCCAGCACAGGTaGTCTGGGTGGGTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: NSRVVHGGGVYFELTRVKILQHR*SGWVPG
Trigger: GCCTGGGACCCACCCAGAGCACCTGTGCTGGAGGAT...TTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGTGGACAACTCTTGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp AATTCAAGAGTTGTCCACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAAACCCAGCCGCAGGCCTaGAGTTCTGGCAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: NSRVVHGGGVYFELTRVKTQPQA*SSGRRW
Trigger: CCACCTTCTGCCAGAACTGCAGGCCTGCGGCTGGGT...TTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGTGGACAACTCTTGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR GCA 90 bp AATTCAAGAGTTGTCCACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAACTTCCTCCACCACGGTaGCCATCAGGAGGGAGCACG +
Preference number: 4 (lower is better)
Translates to: NSRVVHGGGVYFELTRVKLPPPR*PSGGST
Trigger: CGTGCTCCCTCCTGATGGGCACCGTGGTGGAGGAAG...TTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGTGGACAACTCTTGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR GCA 90 bp CAACATCCTGGAGACCCTCGGGCTGAGGTTAGGGGCAAGGGCAACACTGATGACCAATACCTTCAAAACTaGTTTGGTCCACTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: QHPGDPRAEVRGKGNTDDQYLQN*FGPLCF
Trigger: GAAACACAGTGGACCAAAGCAGTTTTGAAGGTATTG...GTCATCAGTGTTGCCCTTGCCCCTAACCTCAGCCCGAGGGTCTCCAGGATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395620.6
CDS-3UTR CCA 90 bp GAGGACAGTAGGAGTTTGGAAGAGGGAGGTAATATTAGTGCATGTTTGTTAAAATGCGGCAGGAAGGGGTaGCGCTGGCTCAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: EDSRSLEEGGNISACLLKCGRKG*RWLSGC
Trigger: GCAGCCACTGAGCCAGCGCCACCCCTTCCTGCCGCA...TTTTAACAAACATGCACTAATATTACCTCCCTCTTCCAAACTCCTACTGTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000395626.5
CDS-3UTR CCA 90 bp CCTCCCTGGGTAAAAGCAAGTCTTTTCTGGTCTTTAATGCACGACGTAATACTTTCGAGGCCACAGCCATaGACTCCACTCCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PPWVKASLFWSLMHDVILSRPQP*TPLLGQ
Trigger: CTGGCCCAGGAGTGGAGTCCATGGCTGTGGCCTCGA...AAGTATTACGTCGTGCATTAAAGACCAGAAAAGACTTGCTTTTACCCAGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp ATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACGGTGGTCCCCAGAGCTGGCTGTaGGGCCGCGGAGGTCATCGA +
Preference number: 4 (lower is better)
Translates to: ISFKARSSGFNSRVVHGGPQSWL*GRGGHR
Trigger: TCGATGACCTCCGCGGCCCCACAGCCAGCTCTGGGG...ACCACCGTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp GGGGAGGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCTGAAAGCAAGTCTTTTCTaGTCTTTAATGCACGACGTA +
Preference number: 4 (lower is better)
Translates to: GEDKDKATVPSPGPGNILKASLF*SLMHDV
Trigger: TACGTCGTGCATTAAAGACCAGAAAAGACTTGCTTT...CAGGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp CCCTTAGAGCTAGAGGTGAGAAATTCCCATGGTGGAAAAAGGGCCAGAAACATCCTGGCAGAAGGTGGCTaGTCAGGAACTCTAGACACG +
Preference number: 4 (lower is better)
Translates to: PLELEVRNSHGGKRARNILAEGG*SGTLDT
Trigger: CGTGTCTAGAGTTCCTGACCAGCCACCTTCTGCCAG...GATGTTTCTGGCCCTTTTTCCACCATGGGAATTTCTCACCTCTAGCTCTAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR TCA 90 bp ACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAAGAAAAATAAAATATGCGGAGGCAGGCTGCTGTaGAGCTGCCCAGGGGTCCGA +
Preference number: 4 (lower is better)
Translates to: TVVVFTLNSHESKKNKICGGRLL*SCPGVR
Trigger: TCGGACCCCTGGGCAGCTTCACAGCAGCCTGCCTCC...GCATATTTTATTTTTCTTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR TCA 90 bp CTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTTACCATTCAGATTACTaGAGAGCTCAAAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: LIPLIPKLLDPVPQTRVPYHSDY*RAQRTQ
Trigger: CTGGGTCCTTTGAGCTCTTCAGTAATCTGAATGGTA...AGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR TCA 90 bp CCAGCAGCCCAGAGACCATTTAAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCTGGTGGTGTTTACTTTaGACTCACACGAGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: PAAQRPFKISPVPVRRVIWWCLL*THTSQR
Trigger: TCTTTGACTCGTGTGAGTTCAAAGTAAACACCACCA...GATTACCCTTCGCACCGGCACAGGAGAGATCTTAAATGGTCTCTGGGCTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR TCA 90 bp CTGGCAGGTGGTCAGCTGCCCTTAGAGCTAGAGGTGAGAAATTCCCATGGTGGATGGTGGTGTTTACTTTaGACTCACACGAGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: LAGGQLPLELEVRNSHGGWWCLL*THTSQR
Trigger: TCTTTGACTCGTGTGAGTTCAAAGTAAACACCACCA...TCCACCATGGGAATTTCTCACCTCTAGCTCTAAGGGCAGCTGACCACCTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR TCA 90 bp GGCGAGGGTCTGAGGGTTGGGGCTGTAAAGACAGCCCTTTCATCAGGAAGCTGGTTTAAACCACTAAAATaGCACGTGCCAACATCTTCA +
Preference number: 4 (lower is better)
Translates to: GEGLRVGAVKTALSSGSWFKPLK*HVPTSS
Trigger: TGAAGATGTTGGCACGTGTCATTTTAGTGGTTTAAA...CCAGCTTCCTGATGAAAGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR TCA 90 bp CAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCAGGACTGCCTTTACAAAAGAATCACTaGCCCCAAGTAGTCGAGTCT +
Preference number: 4 (lower is better)
Translates to: QKVSYGAGASSCPHPGLPLQKNH*PQVVES
Trigger: AGACTCGACTACTTGGGGTCAGTGATTCTTTTGTAA...AGGCAGTCCTGGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR TCA 90 bp ACACGTGCCAACATCTTCATTCAGCCAGACCTGGTAAATTCTATCAAAACTAGAGACGTAAGCCCCCTGTaGGGGTGGGAGACTGTGGTC +
Preference number: 4 (lower is better)
Translates to: TRANIFIQPDLVNSIKTRDVSPL*GWETVV
Trigger: GACCACAGTCTCCCACCCTCACAGGGGGCTTACGTC...TCTAGTTTTGATAGAATTTACCAGGTCTGGCTGAATGAAGATGTTGGCACGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395620.6
CDS-3UTR GCA 90 bp ACCACTTCCCCAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCACGATGTTTTTCATCTaGCGTCTGATAGACGAAGTC +
Preference number: 4 (lower is better)
Translates to: TTSPKGVLWSRCFIVSTPTMFFI*RLIDEV
Trigger: GACTTCGTCTATCAGACGGCAGATGAAAAACATCGT...GGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTGGGGAAGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395620.6
CDS-3UTR GCA 90 bp TTAATTCAAGAGTTGTCCACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAATGTTCTCCCGGCACTaGTGGGCCACACGTTCGGAG +
Preference number: 4 (lower is better)
Translates to: LIQELSTVVVFTLNSHESMFSRH*WATRSE
Trigger: CTCCGAACGTGTGGCCCAGCAGTGCCGGGAGAACAT...TGACTCGTGTGAGTTCAAAGTAAACACCACCACCGTGGACAACTCTTGAATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395620.6
CDS-3UTR GCA 90 bp ACACGTGCCAACATCTTCATTCAGCCAGACCTGGTAAATTCTATCAAAACTAGACAGGCCCAAAGGATGTaGTGGTCCCCAGGACTGGGC +
Preference number: 4 (lower is better)
Translates to: TRANIFIQPDLVNSIKTRQAQRM*WSPGLG
Trigger: GCCCAGTCCTGGGGACCAGCACATCCTTTGGGCCTG...TCTAGTTTTGATAGAATTTACCAGGTCTGGCTGAATGAAGATGTTGGCACGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp TTAATTCAAGAGTTGTCCACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCATCTTCTCCACTAGTCTaGGGCCGGGCTTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LIQELSTVVVFTLNSHESSSPLV*GRACSS
Trigger: GCTGGAGCAAGCCCGGCCCCAGACTAGTGGAGAAGA...TGACTCGTGTGAGTTCAAAGTAAACACCACCACCGTGGACAACTCTTGAATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp ATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACGGTGGTGGGCTCCCCCGAAGCTaGTTCAGTGTCAGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: ISFKARSSGFNSRVVHGGGLPRS*FSVSGW
Trigger: CCAGCCGCTGACACTGAACCAGCTTCGGGGGAGCCC...ACCACCGTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp ACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAAGAAAAATAAAATATGCCCCCAGAGCTGGCTGTaGGGCCGCGGAGGTCATCGA +
Preference number: 4 (lower is better)
Translates to: TVVVFTLNSHESKKNKICPQSWL*GRGGHR
Trigger: TCGATGACCTCCGCGGCCCCACAGCCAGCTCTGGGG...GCATATTTTATTTTTCTTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp TGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTAAAGCAAGTCTTTTCTaGTCTTTAATGCACGACGTA +
Preference number: 4 (lower is better)
Translates to: WHRCNMRGSGRWLHDQCSKASLF*SLMHDV
Trigger: TACGTCGTGCATTAAAGACCAGAAAAGACTTGCTTT...ACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp TTAATTCAAGAGTTGTCCACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAGAGGGGCTGGCAGGTaGTCAGCTGCCCTTAGAGCT +
Preference number: 4 (lower is better)
Translates to: LIQELSTVVVFTLNSHESRGAGR*SAALRA
Trigger: AGCTCTAAGGGCAGCTGACCACCTGCCAGCCCCTCT...TGACTCGTGTGAGTTCAAAGTAAACACCACCACCGTGGACAACTCTTGAATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp CCTCCCTGGGTAAAAGCAAGTCTTTTCTGGTCTTTAATGCACGACGTAATACTTCAGGTGCAACATGCGTaGCAGTGGCCGGTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: PPWVKASLFWSLMHDVILQVQHA*QWPVAS
Trigger: TGAAGCCACCGGCCACTGCCACGCATGTTGCACCTG...AAGTATTACGTCGTGCATTAAAGACCAGAAAAGACTTGCTTTTACCCAGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR TCA 90 bp GCTCAGATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACAGGCCTGGTCACCAGTaGGTCCAGGTTCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: AQISFKARSSGFNSRVVHRPGHQ*VQVHQG
Trigger: GCCCTGGTGAACCTGGACTCACTGGTGACCAGGCCT...GTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAATCTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR TCA 90 bp GCAGCCCAGAGACCATTTAAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCTTCTTACAAAAGAATCACTaGCCCCAAGTAGTCGAGTCT +
Preference number: 4 (lower is better)
Translates to: AAQRPFKISPVPVRRVIFLQKNH*PQVVES
Trigger: AGACTCGACTACTTGGGGTCAGTGATTCTTTTGTAA...GAAGATTACCCTTCGCACCGGCACAGGAGAGATCTTAAATGGTCTCTGGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR TCA 90 bp GCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCTTTCACAAAGAAAACTaGGACCCCTGGCTATCTATT +
Preference number: 4 (lower is better)
Translates to: ALIPLIPKLLDPVPQTRVFHKEN*DPWLSI
Trigger: AATAGATAGCCAGGGGTCTCAGTTTTCTTTGTGAAA...GACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395620.6
CDS-3UTR GCA 90 bp ACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAAGAAAAATAAAATATGCGTCTGGGGCCGGGCTTaGTCCAGCTCGGAGGACACT +
Preference number: 4 (lower is better)
Translates to: TVVVFTLNSHESKKNKICVWGRA*SSSEDT
Trigger: AGTGTCCTCCGAGCTGGAGCAAGCCCGGCCCCAGAC...GCATATTTTATTTTTCTTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp ATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACGGTGGTCTTGGTGGTGGAGACTaGGCCCCACGCGTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: ISFKARSSGFNSRVVHGGLGGGD*APRVRS
Trigger: GCTTCTGACGCGTGGGGCGCAGTCTCCACCACCAAG...ACCACCGTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp ACACGTGCCAACATCTTCATTCAGCCAGACCTGGTAAATTCTATCAAAACTAGAGGAAAGGGTTGGTTGTaGCAGTGGCCTGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TRANIFIQPDLVNSIKTRGKGWL*QWPGLL
Trigger: CAGCAGCCCAGGCCACTGGCACAACCAACCCTTTCC...TCTAGTTTTGATAGAATTTACCAGGTCTGGCTGAATGAAGATGTTGGCACGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp TTAATTCAAGAGTTGTCCACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAATCCACCAGGCAAGCTaGCCAGACACAGGATTGGGG +
Preference number: 4 (lower is better)
Translates to: LIQELSTVVVFTLNSHESIHQAS*PDTGLG
Trigger: CCCCAATCCTGTGTCTGGGCAGCTTGCCTGGTGGAT...TGACTCGTGTGAGTTCAAAGTAAACACCACCACCGTGGACAACTCTTGAATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR GCA 90 bp GCTCAGATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACACCCAGCCGCAGGCCTaGAGTTCTGGCAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: AQISFKARSSGFNSRVVHTQPQA*SSGRRW
Trigger: CCACCTTCTGCCAGAACTGCAGGCCTGCGGCTGGGT...GTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAATCTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp ACACGTGCCAACATCTTCATTCAGCCAGACCTGGTAAATTCTATCAAAACTAGATCTTCTCCACTAGTCTaGGGCCGGGCTTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TRANIFIQPDLVNSIKTRSSPLV*GRACSS
Trigger: GCTGGAGCAAGCCCGGCCCCAGACTAGTGGAGAAGA...TCTAGTTTTGATAGAATTTACCAGGTCTGGCTGAATGAAGATGTTGGCACGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp TCAGGATGTTGGTATATTCGTAAGAAAAATAGCCTCTCAGGATCTAGCCAAAAAGGGCTCCCCCGAAGCTaGTTCAGTGTCAGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: SGCWYIRKKNSLSGSSQKGLPRS*FSVSGW
Trigger: CCAGCCGCTGACACTGAACCAGCTTCGGGGGAGCCC...TTTTTGGCTAGATCCTGAGAGGCTATTTTTCTTACGAATATACCAACATCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp TCAGGATGTTGGTATATTCGTAAGAAAAATAGCCTCTCAGGATCTAGCCAAAAAGCTGGTCCCCAGGACTaGGCTCCCCCGAAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: SGCWYIRKKNSLSGSSQKAGPQD*APPKLV
Trigger: AACCAGCTTCGGGGGAGCCCAGTCCTGGGGACCAGC...TTTTTGGCTAGATCCTGAGAGGCTATTTTTCTTACGAATATACCAACATCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp ACACGTGCCAACATCTTCATTCAGCCAGACCTGGTAAATTCTATCAAAACTAGATCAGAGAGGAACCAGTaGCCCCCAGAGCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TRANIFIQPDLVNSIKTRSERNQ*PPELAV
Trigger: CACAGCCAGCTCTGGGGGCCACTGGTTCCTCTCTGA...TCTAGTTTTGATAGAATTTACCAGGTCTGGCTGAATGAAGATGTTGGCACGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp ATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACGGTGGTGGTTGGTTGTGCCAGTaGCCTGGGCTGCTGATGGGG +
Preference number: 4 (lower is better)
Translates to: ISFKARSSGFNSRVVHGGGWLCQ*PGLLMG
Trigger: CCCCATCAGCAGCCCAGGCCACTGGCACAACCAACC...ACCACCGTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR TCA 90 bp GCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCTTTAAACCACTAAAATaGCACGTGCCAACATCTTCA +
Preference number: 4 (lower is better)
Translates to: ALIPLIPKLLDPVPQTRVFKPLK*HVPTSS
Trigger: TGAAGATGTTGGCACGTGTCATTTTAGTGGTTTAAA...GACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR TCA 90 bp AATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCTAGCCAAAAAGGCTaGAAGTCAATCAGTTTAGTA +
Preference number: 4 (lower is better)
Translates to: NTPNPQTLGSRPTDESPCSSQKG*KSISLV
Trigger: TACTAAACTGATTGACTTTCAGCCTTTTTGGCTAGA...GCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR GCA 90 bp AATTCAAGAGTTGTCCACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAAGCTCAGCCACTTCTCTaGTCATGGCAAGTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: NSRVVHGGGVYFELTRVKAQPLL*SWQVPA
Trigger: AGCTGGCACTTGCCATGAGCAGAGAAGTGGCTGAGC...TTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGTGGACAACTCTTGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp ATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACGGTGGTGCCTCAGAGGAGCCCTaGCAGGACCTCAGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: ISFKARSSGFNSRVVHGGASEEP*QDLSAL
Trigger: CAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGC...ACCACCGTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp GCTCAGATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACGCCTCAGAGGAGCCCTaGCAGGACCTCAGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: AQISFKARSSGFNSRVVHASEEP*QDLSAL
Trigger: CAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGC...GTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAATCTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp GCTCAGATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACTCCCCACTCAGAGCCTaGATGTCCCAGCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: AQISFKARSSGFNSRVVHSPLRA*MSQQPR
Trigger: TCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGA...GTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAATCTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR GCA 90 bp GAGGACAGTAGGAGTTTGGAAGAGGGAGGTAATATTAGTGCATGTTTGTTAAAATGGGCAACAGGGACATaGACTCGGGATGGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: EDSRSLEEGGNISACLLKWATGT*TRDGLC
Trigger: GCACAGGCCATCCCGAGTGCATGTCCCTGTTGCCCA...TTTTAACAAACATGCACTAATATTACCTCCCTCTTCCAAACTCCTACTGTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CCA 90 bp ACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAAGAAAAATAAAATATGCGGCCCCACGGGTCATTaGAGGTGGCTTCCCGGACTT +
Preference number: 4 (lower is better)
Translates to: TVVVFTLNSHESKKNKICGPTGH*RWLPGL
Trigger: AAGTCCGGGAAGCCACCTCCAATGACCCGTGGGGCC...GCATATTTTATTTTTCTTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395620.6
CDS-3UTR CCA 90 bp ATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACGGTGGTTCTTCTCCACTAGTCTaGGGCCGGGCTTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ISFKARSSGFNSRVVHGGSSPLV*GRACSS
Trigger: GCTGGAGCAAGCCCGGCCCCAGACTAGTGGAGAAGA...ACCACCGTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp ACACGTGCCAACATCTTCATTCAGCCAGACCTGGTAAATTCTATCAAAACTAGATTTTCCGGGCACTGCTaGGCTTGCTTGAGGCGACAG +
Preference number: 4 (lower is better)
Translates to: TRANIFIQPDLVNSIKTRFSGHC*ACLRRQ
Trigger: CTGTCGCCTCAAGCAAGCCCAGCAGTGCCCGGAAAA...TCTAGTTTTGATAGAATTTACCAGGTCTGGCTGAATGAAGATGTTGGCACGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp ACACGTGCCAACATCTTCATTCAGCCAGACCTGGTAAATTCTATCAAAACTAGACGAGGGTCTGAGGGTTaGGGCTGTAAAGACAGCCCT +
Preference number: 4 (lower is better)
Translates to: TRANIFIQPDLVNSIKTRRGSEG*GCKDSP
Trigger: AGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCG...TCTAGTTTTGATAGAATTTACCAGGTCTGGCTGAATGAAGATGTTGGCACGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp ACCACTTCCCCAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCAAAGCAAGTCTTTTCTaGTCTTTAATGCACGACGTA +
Preference number: 4 (lower is better)
Translates to: TTSPKGVLWSRCFIVSTPKASLF*SLMHDV
Trigger: TACGTCGTGCATTAAAGACCAGAAAAGACTTGCTTT...GGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTGGGGAAGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp TCAGGATGTTGGTATATTCGTAAGAAAAATAGCCTCTCAGGATCTAGCCAAAAAGAACCAGAGAGGGGCTaGCAGGTGGTCAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SGCWYIRKKNSLSGSSQKEPERG*QVVSCP
Trigger: AGGGCAGCTGACCACCTGCCAGCCCCTCTCTGGTTC...TTTTTGGCTAGATCCTGAGAGGCTATTTTTCTTACGAATATACCAACATCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR TCA 90 bp ACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAAGAAAAATAAAATATGCAGTGGCCTGGGCTGCTaGTGGGGGTATACCCACACT +
Preference number: 4 (lower is better)
Translates to: TVVVFTLNSHESKKNKICSGLGC*WGYTHT
Trigger: AGTGTGGGTATACCCCCATCAGCAGCCCAGGCCACT...GCATATTTTATTTTTCTTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR TCA 90 bp GCAGCCCAGAGACCATTTAAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCTTCTTTAAACCACTAAAATaGCACGTGCCAACATCTTCA +
Preference number: 4 (lower is better)
Translates to: AAQRPFKISPVPVRRVIFFKPLK*HVPTSS
Trigger: TGAAGATGTTGGCACGTGTCATTTTAGTGGTTTAAA...GAAGATTACCCTTCGCACCGGCACAGGAGAGATCTTAAATGGTCTCTGGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR GCA 90 bp ATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACGGTGGTACAGACGAGAGTCCCTaGTCGGCATCCTCCAGCACA +
Preference number: 4 (lower is better)
Translates to: ISFKARSSGFNSRVVHGGTDESP*SASSST
Trigger: TGTGCTGGAGGATGCCGAGCAGGGACTCTCGTCTGT...ACCACCGTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR GCA 90 bp ATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACGGTGGTATCCACCAGGCAAGCTaGCCAGACACAGGATTGGGG +
Preference number: 4 (lower is better)
Translates to: ISFKARSSGFNSRVVHGGIHQAS*PDTGLG
Trigger: CCCCAATCCTGTGTCTGGGCAGCTTGCCTGGTGGAT...ACCACCGTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp ATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACGGTGGTCACTGTCCCAAGTCCTaGGCCAGGCAACATCCTGGA +
Preference number: 4 (lower is better)
Translates to: ISFKARSSGFNSRVVHGGHCPKS*ARQHPG
Trigger: TCCAGGATGTTGCCTGGCCCAGGACTTGGGACAGTG...ACCACCGTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp TCAGGATGTTGGTATATTCGTAAGAAAAATAGCCTCTCAGGATCTAGCCAAAAAGCCTGTGCCAGAAGATaGGGCAGGGGGCTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SGCWYIRKKNSLSGSSQKACARR*GRGLSS
Trigger: AGAAGACAGCCCCCTGCCCCATCTTCTGGCACAGGC...TTTTTGGCTAGATCCTGAGAGGCTATTTTTCTTACGAATATACCAACATCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp ACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAAGAAAAATAAAATATGCGCCTGTGCCAGAAGATaGGGCAGGGGGCTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: TVVVFTLNSHESKKNKICACARR*GRGLSS
Trigger: AGAAGACAGCCCCCTGCCCCATCTTCTGGCACAGGC...GCATATTTTATTTTTCTTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR TCA 90 bp CCTCCCTGGGTAAAAGCAAGTCTTTTCTGGTCTTTAATGCACGACGTAATACTTTCCCCATCTTTAGCCTaGGCGTGGATTAAGACAGAG +
Preference number: 4 (lower is better)
Translates to: PPWVKASLFWSLMHDVILSPSLA*AWIKTE
Trigger: CTCTGTCTTAATCCACGCTCAGGCTAAAGATGGGGA...AAGTATTACGTCGTGCATTAAAGACCAGAAAAGACTTGCTTTTACCCAGGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp CCCTTAGAGCTAGAGGTGAGAAATTCCCATGGTGGAAAAAGGGCCAGAAACATCACGATGTTTTTCATCTaGCGTCTGATAGACGAAGTC +
Preference number: 4 (lower is better)
Translates to: PLELEVRNSHGGKRARNITMFFI*RLIDEV
Trigger: GACTTCGTCTATCAGACGGCAGATGAAAAACATCGT...GATGTTTCTGGCCCTTTTTCCACCATGGGAATTTCTCACCTCTAGCTCTAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR GCA 90 bp GCTCAGATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACCTGAGGCGTTCTTCCTaGTCAGCCACTTCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: AQISFKARSSGFNSRVVHLRRSS*SATSLL
Trigger: GAGCAGAGAAGTGGCTGAGCAGGAAGAACGCCTCAG...GTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAATCTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp GCTCAGATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACAGGGGTCCGAGTTCTTaGGGACAGATTGTACGGTGG +
Preference number: 4 (lower is better)
Translates to: AQISFKARSSGFNSRVVHRGPSS*GQIVRW
Trigger: CCACCGTACAATCTGTCCCCAAGAACTCGGACCCCT...GTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAATCTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp ACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAAGAAAAATAAAATATGCTTTTCCGGGCACTGCTaGGCTTGCTTGAGGCGACAG +
Preference number: 4 (lower is better)
Translates to: TVVVFTLNSHESKKNKICFSGHC*ACLRRQ
Trigger: CTGTCGCCTCAAGCAAGCCCAGCAGTGCCCGGAAAA...GCATATTTTATTTTTCTTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp GCTCAGATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACAGAGAAGGAAAGGGTTaGTTGTGCCAGTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: AQISFKARSSGFNSRVVHREGKG*LCQWPG
Trigger: CCCAGGCCACTGGCACAACCAACCCTTTCCTTCTCT...GTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAATCTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp TTAATTCAAGAGTTGTCCACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCACCAAAAGGTGTCTTATaGAGCCGGTGCTTCATCGTG +
Preference number: 4 (lower is better)
Translates to: LIQELSTVVVFTLNSHESPKGVL*SRCFIV
Trigger: CACGATGAAGCACCGGCTCCATAAGACACCTTTTGG...TGACTCGTGTGAGTTCAAAGTAAACACCACCACCGTGGACAACTCTTGAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp TCAGGATGTTGGTATATTCGTAAGAAAAATAGCCTCTCAGGATCTAGCCAAAAACTTCTTGGGTCCCGGTaGCCCAGTGGCTGTCATGTT +
Preference number: 4 (lower is better)
Translates to: SGCWYIRKKNSLSGSSQKLLGSR*PSGCHV
Trigger: AACATGACAGCCACTGGGCCACCGGGACCCAAGAAG...TTTTTGGCTAGATCCTGAGAGGCTATTTTTCTTACGAATATACCAACATCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR TCA 90 bp ACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAAGAAAAATAAAATATGCTCGAGTCTAGTCTACTaGCCTGTAAGGCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: TVVVFTLNSHESKKNKICSSLVY*PVRLAQ
Trigger: CTGGGCCAGCCTTACAGGTCAGTAGACTAGACTCGA...GCATATTTTATTTTTCTTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp ATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACGGTGGTCAGCGTAGTCTGCTGTaGGAGAGAGCCATGCTCTTT +
Preference number: 4 (lower is better)
Translates to: ISFKARSSGFNSRVVHGGQRSLL*ERAMLF
Trigger: AAAGAGCATGGCTCTCTCCCACAGCAGACTACGCTG...ACCACCGTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp ACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAAGAAAAATAAAATATGCTTCAGTGTCAGCGGCTaGGGCTGGTTCACCTGGAAA +
Preference number: 4 (lower is better)
Translates to: TVVVFTLNSHESKKNKICFSVSG*GWFTWK
Trigger: TTTCCAGGTGAACCAGCCCCAGCCGCTGACACTGAA...GCATATTTTATTTTTCTTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp ACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAAGAAAAATAAAATATGCCATTGCAGGGCCCAGTaGTGTCAGAGAGGAACCAGT +
Preference number: 4 (lower is better)
Translates to: TVVVFTLNSHESKKNKICHCRAQ*CQRGTS
Trigger: ACTGGTTCCTCTCTGACACCACTGGGCCCTGCAATG...GCATATTTTATTTTTCTTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp ACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAAGAAAAATAAAATATGCAGAGAAGGAAAGGGTTaGTTGTGCCAGTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: TVVVFTLNSHESKKNKICREGKG*LCQWPG
Trigger: CCCAGGCCACTGGCACAACCAACCCTTTCCTTCTCT...GCATATTTTATTTTTCTTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp TCAGGATGTTGGTATATTCGTAAGAAAAATAGCCTCTCAGGATCTAGCCAAAAACGAAGGGTAATCTTCTaGAACCAGAGAGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SGCWYIRKKNSLSGSSQKRRVIF*NQRGAG
Trigger: GCCAGCCCCTCTCTGGTTCCAGAAGATTACCCTTCG...TTTTTGGCTAGATCCTGAGAGGCTATTTTTCTTACGAATATACCAACATCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR TCA 90 bp ACACGTGCCAACATCTTCATTCAGCCAGACCTGGTAAATTCTATCAAAACTAGACAACCACTTTTCGCCTaGCCTTCCCTGTTCAAGAAT +
Preference number: 4 (lower is better)
Translates to: TRANIFIQPDLVNSIKTRQPLFA*PSLFKN
Trigger: ATTCTTGAACAGGGAAGGTCAGGCGAAAAGTGGTTG...TCTAGTTTTGATAGAATTTACCAGGTCTGGCTGAATGAAGATGTTGGCACGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395620.6
CDS-3UTR CCA 90 bp AATTCAAGAGTTGTCCACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAATTTGCGAAGCTGAAATaGGAGGATTACTTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: NSRVVHGGGVYFELTRVKFAKLK*EDYLRP
Trigger: TGGCCTCAAGTAATCCTCCCATTTCAGCTTCGCAAA...TTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGTGGACAACTCTTGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395620.6
CDS-3UTR GCA 90 bp ACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAAGAAAAATAAAATATGCGGGGTATACCCACACTaGCCACCATGTTCATCATTG +
Preference number: 4 (lower is better)
Translates to: TVVVFTLNSHESKKNKICGVYPH*PPCSSL
Trigger: CAATGATGAACATGGTGGGCAGTGTGGGTATACCCC...GCATATTTTATTTTTCTTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
3UTR CAA 72 bp GTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTaGTCCACGGTGGTGGTGTTTACTTTGAACTCACAC +
Preference number: 4 (lower is better)
Translates to: VLKLALVDLIQE*STVVVFTLNSH
Trigger: GTGTGAGTTCAAAGTAAACACCACCACCGTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CCA 90 bp ACACGTGCCAACATCTTCATTCAGCCAGACCTGGTAAATTCTATCAAAACTAGAGAGAAATTCCCATGGTaGAAAAAGGGCCAGAAACAT +
Preference number: 4 (lower is better)
Translates to: TRANIFIQPDLVNSIKTREKFPW*KKGQKH
Trigger: ATGTTTCTGGCCCTTTTTCCACCATGGGAATTTCTC...TCTAGTTTTGATAGAATTTACCAGGTCTGGCTGAATGAAGATGTTGGCACGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp TCAGGATGTTGGTATATTCGTAAGAAAAATAGCCTCTCAGGATCTAGCCAAAAAGGTGAGAAATTCCCATaGTGGAAAAAGGGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: SGCWYIRKKNSLSGSSQKGEKFP*WKKGQK
Trigger: TTTCTGGCCCTTTTTCCACCATGGGAATTTCTCACC...TTTTTGGCTAGATCCTGAGAGGCTATTTTTCTTACGAATATACCAACATCCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp GCTCAGATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACGGAATGGCTATTTTATaGGTTGTCTTTTCACTGCCT +
Preference number: 4 (lower is better)
Translates to: AQISFKARSSGFNSRVVHGMAIL*VVFSLP
Trigger: AGGCAGTGAAAAGACAACCCATAAAATAGCCATTCC...GTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAATCTGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395620.6
CDS-3UTR TCA 90 bp ATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACGGTGGTCTCAAAGTCACATCATaGAAGACTCGTTACAAAAGA +
Preference number: 4 (lower is better)
Translates to: ISFKARSSGFNSRVVHGGLKVTS*KTRYKR
Trigger: TCTTTTGTAACGAGTCTTTCATGATGTGACTTTGAG...ACCACCGTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CCA 90 bp ACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAAGAAAAATAAAATATGCAGGACAGTAGGAGTTTaGAAGAGGGAGGTAATATTA +
Preference number: 4 (lower is better)
Translates to: TVVVFTLNSHESKKNKICRTVGV*KREVIL
Trigger: TAATATTACCTCCCTCTTCCAAACTCCTACTGTCCT...GCATATTTTATTTTTCTTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR TCA 90 bp ACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAAGAAAAATAAAATATGCTTTAAACCACTAAAATaGCACGTGCCAACATCTTCA +
Preference number: 4 (lower is better)
Translates to: TVVVFTLNSHESKKNKICFKPLK*HVPTSS
Trigger: TGAAGATGTTGGCACGTGTCATTTTAGTGGTTTAAA...GCATATTTTATTTTTCTTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
3UTR CAA 72 bp TTAATTCAAGAGTTGTCCACGGTGGTGGTGTTTACTTaGAACTCACACGAGTCAAAGAAAAATAAAATATGC +
Preference number: 4 (lower is better)
Translates to: LIQELSTVVVFT*NSHESKKNKIC
Trigger: GCATATTTTATTTTTCTTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGTGGACAACTCTTGAATTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS GCA 90 bp GCGGGGAGGTGGCTCTGCTCCTCCGGGCCGGCGTGGGTGCGCCGCTaGGGCCACCGGCAGCGCTCGAGAGGCGGGAGCGACCGTAGCCCG +
Preference number: 5 (lower is better)
Translates to: AGRWLCSSGPAWVRR*GHRQRSRGGSDRSP
Trigger: CGGGCTACGGTCGCTCCCGCCTCTCGAGCGCTGCCGGTGGCCGCAGCGGCGCACCCACGCCGGCCCGGAGGAGCAGAGCCACCTCCCCGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395618.7
ENST00000494192.6
ENST00000575595.5
ENST00000580579.5
CDS GCA 90 bp GGAAGCCATGACCTCTGCTCCTCCGGGCCGGCGTGGGTGCGCCGCTaGGGCCACCGGCAGCGCTCGAGAGGCGGGAGCGACCGTAGCCCG +
Preference number: 5 (lower is better)
Translates to: GSHDLCSSGPAWVRR*GHRQRSRGGSDRSP
Trigger: CGGGCTACGGTCGCTCCCGCCTCTCGAGCGCTGCCGGTGGCCGCAGCGGCGCACCCACGCCGGCCCGGAGGAGCAGAGGTCATGGCTTCC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577692.5
CDS GCA 90 bp ACATCCATCTCACTCTGCTCCTCCGGGCCGGCGTGGGTGCGCCGCTaGGGCCACCGGCAGCGCTCGAGAGGCGGGAGCGACCGTAGCCCG +
Preference number: 5 (lower is better)
Translates to: TSISLCSSGPAWVRR*GHRQRSRGGSDRSP
Trigger: CGGGCTACGGTCGCTCCCGCCTCTCGAGCGCTGCCGGTGGCCGCAGCGGCGCACCCACGCCGGCCCGGAGGAGCAGAGTGAGATGGATGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577244.5
ENST00000582234.5
CDS GCA 90 bp ATCTCCATCTTCCTCTGCTCCTCCGGGCCGGCGTGGGTGCGCCGCTaGGGCCACCGGCAGCGCTCGAGAGGCGGGAGCGACCGTAGCCCG +
Preference number: 5 (lower is better)
Translates to: ISIFLCSSGPAWVRR*GHRQRSRGGSDRSP
Trigger: CGGGCTACGGTCGCTCCCGCCTCTCGAGCGCTGCCGGTGGCCGCAGCGGCGCACCCACGCCGGCCCGGAGGAGCAGAGGAAGATGGAGAT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582659.5
CDS GCA 90 bp GAGACCTCATTTCTCTGCTCCTCCGGGCCGGCGTGGGTGCGCCGCTaGGGCCACCGGCAGCGCTCGAGAGGCGGGAGCGACCGTAGCCCG +
Preference number: 5 (lower is better)
Translates to: ETSFLCSSGPAWVRR*GHRQRSRGGSDRSP
Trigger: CGGGCTACGGTCGCTCCCGCCTCTCGAGCGCTGCCGGTGGCCGCAGCGGCGCACCCACGCCGGCCCGGAGGAGCAGAGAAATGAGGTCTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583197.5
CDS CCA 90 bp CGCGGGGAGGTGGCTCGGGCTGCGCGGTCACAAGTGAGGCAGGGCTaGGACCAGTCGCCATTTGGGCGGGAGGCCAGCCCCAGGTGCGGC +
Preference number: 5 (lower is better)
Translates to: RGEVARAARSQVRQG*DQSPFGREASPRCG
Trigger: GCCGCACCTGGGGCTGGCCTCCCGCCCAAATGGCGACTGGTCCCAGCCCTGCCTCACTTGTGACCGCGCAGCCCGAGCCACCTCCCCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000395626.5
CDS TCA 90 bp CGGAGGACACTCGCGGGGAGGTGGCTCGGGCTGCGCGGTCACAAGTaGGGCAGGGCTGGGACCAGTCGCCATTTGGGCGGGAGGCCAGCC +
Preference number: 5 (lower is better)
Translates to: RRTLAGRWLGLRGHK*GRAGTSRHLGGRPA
Trigger: GGCTGGCCTCCCGCCCAAATGGCGACTGGTCCCAGCCCTGCCTCACTTGTGACCGCGCAGCCCGAGCCACCTCCCCGCGAGTGTCCTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000395626.5
CDS GCA 90 bp CAGGGCTGGGACCAGTCGCCATTTGGGCGGGAGGCCAGCCCCAGGTaGGGCAGGAAGGGGTGGCGCTGGCTCAGTGGCTGCAGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: QGWDQSPFGREASPR*GRKGWRWLSGCSSS
Trigger: TGAGGAGCTGCAGCCACTGAGCCAGCGCCACCCCTTCCTGCCGCACCTGGGGCTGGCCTCCCGCCCAAATGGCGACTGGTCCCAGCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000395626.5
CDS GCA 90 bp GGCTTGCTCCAGCTCGGAGGACACTCGCGGGGAGGTGGCTCGGGCTaGGCGGTCACAAGTGAGGCAGGGCTGGGACCAGTCGCCATTTGG +
Preference number: 5 (lower is better)
Translates to: GLLQLGGHSRGGGSG*AVTSEAGLGPVAIW
Trigger: CCAAATGGCGACTGGTCCCAGCCCTGCCTCACTTGTGACCGCGCAGCCCGAGCCACCTCCCCGCGAGTGTCCTCCGAGCTGGAGCAAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000395626.5
CDS CCA 90 bp TGGGGCCGCGGAGGTCATCGAGGCCACAGCCATGGACTCCACTCCTaGGCCAGGCCCAAAGGATGTGCTGGTCCCCAGGACTGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: WGRGGHRGHSHGLHS*ARPKGCAGPQDWAP
Trigger: GGGAGCCCAGTCCTGGGGACCAGCACATCCTTTGGGCCTGGCCCAGGAGTGGAGTCCATGGCTGTGGCCTCGATGACCTCCGCGGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000571254.1
ENST00000575595.5
CDS CCA 90 bp GCCGAGGTGGCGGGAGCACCTGGTGCCAGGAAAGGGTTGAGGGACTaGGCTGGTGGGGCAGGCCTGGTCACCAGTGAGTCCAGGTTCACC +
Preference number: 5 (lower is better)
Translates to: AEVAGAPGARKGLRD*AGGAGLVTSESRFT
Trigger: GGTGAACCTGGACTCACTGGTGACCAGGCCTGCCCCACCAGCCCAGTCCCTCAACCCTTTCCTGGCACCAGGTGCTCCCGCCACCTCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000571254.1
ENST00000575595.5
CDS CCA 90 bp TGCAGGGCCCAGTGGTGTCAGAGAGGAACCAGTGGCCCCCAGAGCTaGCTGTGGGGCCGCGGAGGTCATCGAGGCCACAGCCATGGACTC +
Preference number: 5 (lower is better)
Translates to: CRAQWCQRGTSGPQS*LWGRGGHRGHSHGL
Trigger: GAGTCCATGGCTGTGGCCTCGATGACCTCCGCGGCCCCACAGCCAGCTCTGGGGGCCACTGGTTCCTCTCTGACACCACTGGGCCCTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000571254.1
ENST00000575595.5
CDS-3UTR CAA 90 bp CCACCGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCACCACGGTGCCGGCCCGCCCCAGGGGTaGGTCTGGTTAGTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: PPASGTEKQLGDFLHHGAGPPQG*VWLVEA
Trigger: AGCCTCCACTAACCAGACCAACCCCTGGGGCGGGCC...GGCACCGTGGTGGAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CAA 90 bp ATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCAGTCTGGGGCCGGGCTaGCTCCAGCTCGGAGGACAC +
Preference number: 5 (lower is better)
Translates to: MSGCSPHSEPACPSSPETSLGPG*LQLGGH
Trigger: GTGTCCTCCGAGCTGGAGCAAGCCCGGCCCCAGACT...GGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CAA 90 bp GGCTTGGTACCAAACGATGGCCAGGGGTCTGAAGTACTCGCAGGAGCCGCTGGCAGTCTGGGGCCGGGCTaGCTCCAGCTCGGAGGACAC +
Preference number: 5 (lower is better)
Translates to: GLVPNDGQGSEVLAGAAGSLGPG*LQLGGH
Trigger: GTGTCCTCCGAGCTGGAGCAAGCCCGGCCCCAGACT...GCCAGCGGCTCCTGCGAGTACTTCAGACCCCTGGCCATCGTTTGGTACCAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580579.5
CDS-3UTR CAA 90 bp GGCTTGGTACCAAACGATGGCCAGGGGTCTGAAGTACTCGCAGGAGCCGCTGGCGGCCCGCCCCAGGGGTaGGTCTGGTTAGTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: GLVPNDGQGSEVLAGAAGGPPQG*VWLVEA
Trigger: AGCCTCCACTAACCAGACCAACCCCTGGGGCGGGCC...GCCAGCGGCTCCTGCGAGTACTTCAGACCCCTGGCCATCGTTTGGTACCAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580579.5
CDS-3UTR CAA 90 bp ACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCCAGCCGCAGGCCTGCAGTTTCACCAGGGCCGCGTaGGGGCCCAGGAAGGACTCA +
Preference number: 5 (lower is better)
Translates to: TGLPKWQREPKTQPQACSFTRAA*GPRKDS
Trigger: TGAGTCCTTCCTGGGCCCCAACGCGGCCCTGGTGAA...ACTGCAGGCCTGCGGCTGGGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CAA 90 bp CCCCACCCTTCCCCCGGCAGACGAGACCAGCCACCGGCTTACCCAAATGGCAGCGAAGGAAAGGGTTGGTaGTGCCAGTGGCCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: PHPSPGRRDQPPAYPNGSEGKGW*CQWPGL
Trigger: CAGCCCAGGCCACTGGCACAACCAACCCTTTCCTTC...GCTGCCATTTGGGTAAGCCGGTGGCTGGTCTCGTCTGCCGGGGGAAGGGTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS GCA 90 bp CCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCCAGCACAGGTaGTCTGGGTGGGTCCCAGGCCCAGGCACTAGAGAAGGAAAGGGT +
Preference number: 5 (lower is better)
Translates to: PSHRRESLLGILQHR*SGWVPGPGTREGKG
Trigger: ACCCTTTCCTTCTCTAGTGCCTGGGCCTGGGACCCACCCAGAGCACCTGTGCTGGAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000571254.1
ENST00000575595.5
CDS-3UTR CAA 90 bp TCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCGGGCCCCACGGGTCATaGGAGGTGGCTTCCCGGACT +
Preference number: 5 (lower is better)
Translates to: SPNSWIPSHRRESLLGILGPHGS*EVASRT
Trigger: AGTCCGGGAAGCCACCTCCAATGACCCGTGGGGCCC...GAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395620.6
CDS-3UTR CAA 90 bp TCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCAGTCTGGGGCCGGGCTaGCTCCAGCTCGGAGGACAC +
Preference number: 5 (lower is better)
Translates to: SPNSWIPSHRRESLLGILSLGPG*LQLGGH
Trigger: GTGTCCTCCGAGCTGGAGCAAGCCCGGCCCCAGACT...GAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CAA 90 bp TCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCGGCCCGCCCCAGGGGTaGGTCTGGTTAGTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: SPNSWIPSHRRESLLGILGPPQG*VWLVEA
Trigger: AGCCTCCACTAACCAGACCAACCCCTGGGGCGGGCC...GAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CAA 90 bp CCCCACCCTTCCCCCGGCAGACGAGACCAGCCACCGGCTTACCCAAATGGCAGCCAGGGGTCCGAGTTCTaGGGGACAGATTGTACGGTG +
Preference number: 5 (lower is better)
Translates to: PHPSPGRRDQPPAYPNGSQGSEF*GTDCTV
Trigger: CACCGTACAATCTGTCCCCAAGAACTCGGACCCCTG...GCTGCCATTTGGGTAAGCCGGTGGCTGGTCTCGTCTGCCGGGGGAAGGGTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CAA 90 bp ATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCCGGGCACTGCTGGGCTaGCTTGAGGCGACAGTCAGG +
Preference number: 5 (lower is better)
Translates to: MSGCSPHSEPACPSSPETRALLG*LEATVR
Trigger: CCTGACTGTCGCCTCAAGCAAGCCCAGCAGTGCCCG...GGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CAA 90 bp GGGGAGGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCTGCAGGGGGCTGTCTTCTaGGGTCCCGGTGGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: GEDKDKATVPSPGPGNILQGAVF*GPGGPV
Trigger: CACTGGGCCACCGGGACCCAAGAAGACAGCCCCCTG...CAGGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS GCA 90 bp GGGTGGGTCCCAGGCCCAGGCACTAGAGAAGGAAAGGGTTGGTTGTaGCAGTGGCCTGGGCTGCTGATGGGGGTATACCCACACTGCCCA +
Preference number: 5 (lower is better)
Translates to: GWVPGPGTREGKGWL*QWPGLLMGVYPHCP
Trigger: TGGGCAGTGTGGGTATACCCCCATCAGCAGCCCAGGCCACTGGCACAACCAACCCTTTCCTTCTCTAGTGCCTGGGCCTGGGACCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000571254.1
ENST00000575595.5
CDS-3UTR CAA 90 bp CCAGGCAAGCTGCCCAGACACAGGATTGGGGGAATGTCCCCTCCCTGGGTAAAAAGTCTGGGGCCGGGCTaGCTCCAGCTCGGAGGACAC +
Preference number: 5 (lower is better)
Translates to: PGKLPRHRIGGMSPPWVKSLGPG*LQLGGH
Trigger: GTGTCCTCCGAGCTGGAGCAAGCCCGGCCCCAGACT...TTTTACCCAGGGAGGGGACATTCCCCCAATCCTGTGTCTGGGCAGCTTGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CAA 90 bp GGCGAGGGTCTGAGGGTTGGGGCTGTAAAGACAGCCCTTTCATCAGGAAGCTGGAGTCTGGGGCCGGGCTaGCTCCAGCTCGGAGGACAC +
Preference number: 5 (lower is better)
Translates to: GEGLRVGAVKTALSSGSWSLGPG*LQLGGH
Trigger: GTGTCCTCCGAGCTGGAGCAAGCCCGGCCCCAGACT...CCAGCTTCCTGATGAAAGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CAA 90 bp GGCGAGGGTCTGAGGGTTGGGGCTGTAAAGACAGCCCTTTCATCAGGAAGCTGGGGCCCGCCCCAGGGGTaGGTCTGGTTAGTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: GEGLRVGAVKTALSSGSWGPPQG*VWLVEA
Trigger: AGCCTCCACTAACCAGACCAACCCCTGGGGCGGGCC...CCAGCTTCCTGATGAAAGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CAA 90 bp CCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCCAGGAGACAGACACGGGCTaGGTGGTGGAGACTGCGCCC +
Preference number: 5 (lower is better)
Translates to: PNSWIPSHRRESLLGILQETDTG*VVETAP
Trigger: GGGCGCAGTCTCCACCACCAAGCCCGTGTCTGTCTC...CTGGAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CAA 90 bp CCAGGCCCTGCACCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCCGGGCACTGCTGGGCTaGCTTGAGGCGACAGTCAGG +
Preference number: 5 (lower is better)
Translates to: PGPAPSEGKHLSGQASCLRALLG*LEATVR
Trigger: CCTGACTGTCGCCTCAAGCAAGCCCAGCAGTGCCCG...GAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGTGCAGGGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CAA 90 bp TCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCTTCACCAGGGCCGCGTaGGGGCCCAGGAAGGACTCA +
Preference number: 5 (lower is better)
Translates to: SPNSWIPSHRRESLLGILFTRAA*GPRKDS
Trigger: TGAGTCCTTCCTGGGCCCCAACGCGGCCCTGGTGAA...GAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CAA 90 bp CCACGTCCTCGTCCAAGGCCTCAGAGGAGCCCTGCCAGGACCTCAGTGCTTTGGTGCCCAGACACAGGATaGGGGGAATGTCCCCTCCCT +
Preference number: 5 (lower is better)
Translates to: PRPRPRPQRSPARTSVLWCPDTG*GECPLP
Trigger: AGGGAGGGGACATTCCCCCAATCCTGTGTCTGGGCA...CCAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGCCTTGGACGAGGACGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CAA 90 bp CGGTGCCCATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGTGCCCAGACACAGGATaGGGGGAATGTCCCCTCCCT +
Preference number: 5 (lower is better)
Translates to: RCPSGGSTMAQVQHAWQWCPDTG*GECPLP
Trigger: AGGGAGGGGACATTCCCCCAATCCTGTGTCTGGGCA...CCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGATGGGCACCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS GCA 90 bp GAGCTCAAAGGACCCAGAGACAGACACGGGCTTGGTGGTGGAGACTaGGCCCCACGCGTCAGAAGCTCTTTTCCCAGCACTGGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: ELKGPRDRHGLGGGD*APRVRSSFPSTGGR
Trigger: CCTGCCTCCAGTGCTGGGAAAAGAGCTTCTGACGCGTGGGGCGCAGTCTCCACCACCAAGCCCGTGTCTGTCTCTGGGTCCTTTGAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000395626.5
ENST00000395628.6
ENST00000494192.6
ENST00000571254.1
ENST00000572627.6
ENST00000575595.5
ENST00000585097.1
CDS CCA 90 bp GGGTATACCCACACTGCCCACCATGTTCATCATTGCAGGGCCCAGTaGTGTCAGAGAGGAACCAGTGGCCCCCAGAGCTGGCTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: GYTHTAHHVHHCRAQ*CQRGTSGPQSWLWG
Trigger: GCCCCACAGCCAGCTCTGGGGGCCACTGGTTCCTCTCTGACACCACTGGGCCCTGCAATGATGAACATGGTGGGCAGTGTGGGTATACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000571254.1
ENST00000575595.5
CDS-3UTR CAA 90 bp CGGTGCCCATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGATGGAGGCAGCTGGCTaGGTACCAAACGATGGCCAG +
Preference number: 5 (lower is better)
Translates to: RCPSGGSTMAQVQHAWQWMEAAG*VPNDGQ
Trigger: CTGGCCATCGTTTGGTACCAAGCCAGCTGCCTCCAT...CCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGATGGGCACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CAA 90 bp TGGTACCAAACGATGGCCAGGGGTCTGAAGTACTCGCAGGAGCCGCTGGCCCGCATGGAGGCAGCTGGCTaGGTACCAAACGATGGCCAG +
Preference number: 5 (lower is better)
Translates to: WYQTMARGLKYSQEPLARMEAAG*VPNDGQ
Trigger: CTGGCCATCGTTTGGTACCAAGCCAGCTGCCTCCAT...GCGGGCCAGCGGCTCCTGCGAGTACTTCAGACCCCTGGCCATCGTTTGGTACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580579.5
CDS-3UTR CAA 90 bp CGGCAGACGAGACCAGCCACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCGTTCTTGGGGACAGATaGTACGGTGGCTCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: RQTRPATGLPKWQREPKTVLGDR*YGGSSG
Trigger: CCCACTGGAGCCACCGTACAATCTGTCCCCAAGAAC...GGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGTGGCTGGTCTCGTCTGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CAA 90 bp CGTCCAAGGCCTCAGAGGAGCCCTGCCAGGACCTCAGTGCTTTGGAGGAGGTGGCAGGGGTCCGAGTTCTaGGGGACAGATTGTACGGTG +
Preference number: 5 (lower is better)
Translates to: RPRPQRSPARTSVLWRRWQGSEF*GTDCTV
Trigger: CACCGTACAATCTGTCCCCAAGAACTCGGACCCCTG...CCACCTCCTCCAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGCCTTGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CAA 90 bp CCAGGCAAGCTGCCCAGACACAGGATTGGGGGAATGTCCCCTCCCTGGGTAAAAGAGACAGACACGGGCTaGGTGGTGGAGACTGCGCCC +
Preference number: 5 (lower is better)
Translates to: PGKLPRHRIGGMSPPWVKETDTG*VVETAP
Trigger: GGGCGCAGTCTCCACCACCAAGCCCGTGTCTGTCTC...TTTTACCCAGGGAGGGGACATTCCCCCAATCCTGTGTCTGGGCAGCTTGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CAA 90 bp TTAGGGGCAAGGGCAACACTGATGACTCCACGTCCTCGTCCAAGGCCTCAGAGGTTCACCAGGGCCGCGTaGGGGCCCAGGAAGGACTCA +
Preference number: 5 (lower is better)
Translates to: LGARATLMTPRPRPRPQRFTRAA*GPRKDS
Trigger: TGAGTCCTTCCTGGGCCCCAACGCGGCCCTGGTGAA...CCTCTGAGGCCTTGGACGAGGACGTGGAGTCATCAGTGTTGCCCTTGCCCCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CAA 90 bp GTTCAAAACCAGCCACCGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCAGGGGGCTGTCTTCTaGGGTCCCGGTGGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: VQNQPPASGTEKQLGDFLQGAVF*GPGGPV
Trigger: CACTGGGCCACCGGGACCCAAGAAGACAGCCCCCTG...GAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGGTGGCTGGTTTTGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS CCA 90 bp CTCAAGGAGGAGGGCAAGGGCCAGTTGGATATCACTGCTGAGGGCTaGAGGAGCCTGGACACCCACCACAATCGACCAGACCCAAGTGGG +
Preference number: 5 (lower is better)
Translates to: LKEEGKGQLDITAEG*RSLDTHHNRPDPSG
Trigger: CCCACTTGGGTCTGGTCGATTGTGGTGGGTGTCCAGGCTCCTCCAGCCCTCAGCAGTGATATCCAACTGGCCCTTGCCCTCCTCCTTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495155.5
CDS CCA 90 bp GGGAACACCATGCCACCATCCTCAAGGAGGAGGGCAAGGGCCAGTTaGATATCACTGCTGAGGGCTGGAGGAGCCTGGACACCCACCACA +
Preference number: 5 (lower is better)
Translates to: GNTMPPSSRRRARAS*ISLLRAGGAWTPTT
Trigger: TGTGGTGGGTGTCCAGGCTCCTCCAGCCCTCAGCAGTGATATCCAACTGGCCCTTGCCCTCCTCCTTGAGGATGGTGGCATGGTGTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495155.5
CDS CCA 90 bp TACCTCATGGAGGAGAATTCTGAGAGCCAAAGAGGCAAGACAGCCTaGGGTCACCAGCACGCTGGGAGGGGAGACAGGGAGCCTGGCCTC +
Preference number: 5 (lower is better)
Translates to: YLMEENSESQRGKTA*GHQHAGRGDREPGL
Trigger: GAGGCCAGGCTCCCTGTCTCCCCTCCCAGCGTGCTGGTGACCCCAGGCTGTCTTGCCTCTTTGGCTCTCAGAATTCTCCTCCATGAGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584954.1
CDS CCA 90 bp ACTTCATGGCAACTCCACTGCCCAGTGCACACCCTCAGGATGGGCTaGCAACAGGGGCCTCTCCCCGCTTACCCTACCTCATGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: TSWQLHCPVHTLRMG*QQGPLPAYPTSWRR
Trigger: TCTCCTCCATGAGGTAGGGTAAGCGGGGAGAGGCCCCTGTTGCCAGCCCATCCTGAGGGTGTGCACTGGGCAGTGGAGTTGCCATGAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584954.1
CDS CCA 90 bp ACAGGACTTCATGGCAACTCCACTGCCCAGTGCACACCCTCAGGATaGGCTGGCAACAGGGGCCTCTCCCCGCTTACCCTACCTCATGGA +
Preference number: 5 (lower is better)
Translates to: TGLHGNSTAQCTPSG*AGNRGLSPLTLPHG
Trigger: TCCATGAGGTAGGGTAAGCGGGGAGAGGCCCCTGTTGCCAGCCCATCCTGAGGGTGTGCACTGGGCAGTGGAGTTGCCATGAAGTCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584954.1
CDS-3UTR CAA 90 bp CTGGCAGGTGGTCAGCTGCCCTTAGAGCTAGAGGTGAGAAATTCCCATGGTGGAGGGCCCCACGGGTCATaGGAGGTGGCTTCCCGGACT +
Preference number: 5 (lower is better)
Translates to: LAGGQLPLELEVRNSHGGGPHGS*EVASRT
Trigger: AGTCCGGGAAGCCACCTCCAATGACCCGTGGGGCCC...TCCACCATGGGAATTTCTCACCTCTAGCTCTAAGGGCAGCTGACCACCTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CAA 90 bp CAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCAGGACTGCCTAGTCTGGGGCCGGGCTaGCTCCAGCTCGGAGGACAC +
Preference number: 5 (lower is better)
Translates to: QKVSYGAGASSCPHPGLPSLGPG*LQLGGH
Trigger: GTGTCCTCCGAGCTGGAGCAAGCCCGGCCCCAGACT...AGGCAGTCCTGGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CAA 90 bp GCCCAGGCCCTGCACCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCCAGGGGTCCGAGTTCTaGGGGACAGATTGTACGGTG +
Preference number: 5 (lower is better)
Translates to: AQALHRLKESTFLGKHPAQGSEF*GTDCTV
Trigger: CACCGTACAATCTGTCCCCAAGAACTCGGACCCCTG...GGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGTGCAGGGCCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CAA 90 bp CCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCCAGGGCGACAGTCAGGGGTaGAGACTCAAAGGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: PNSWIPSHRRESLLGILQGDSQG*RLKGVR
Trigger: CCTGACCCCTTTGAGTCTCAACCCCTGACTGTCGCC...CTGGAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CAA 90 bp GGGGAGGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCTGGGCGACAGTCAGGGGTaGAGACTCAAAGGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: GEDKDKATVPSPGPGNILGDSQG*RLKGVR
Trigger: CCTGACCCCTTTGAGTCTCAACCCCTGACTGTCGCC...CAGGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CAA 90 bp TCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTCTAATCCCCAAACTCTaGGATCCCGTCCCACAGACG +
Preference number: 5 (lower is better)
Translates to: SGGSTMAQVQHAWQWPVALIPKL*DPVPQT
Trigger: CGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAG...AGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CAA 90 bp AATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCCAGGGGGCTGTCTTCTaGGGTCCCGGTGGCCCAGTG +
Preference number: 5 (lower is better)
Translates to: NTPNPQTLGSRPTDESPCQGAVF*GPGGPV
Trigger: CACTGGGCCACCGGGACCCAAGAAGACAGCCCCCTG...GCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS TCA 90 bp GCTGGCAGTGGTGGAGGTGCATCAAGCTGGGTCTGGTTGCTTGGATaGGGGTCTGTAGGAAGTCACCAGAAGGAGTGCCTGGAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: AGSGGGASSWVWLLG*GSVGSHQKECLEAS
Trigger: GCTGGCCTCCAGGCACTCCTTCTGGTGACTTCCTACAGACCCTCATCCAAGCAACCAGACCCAGCTTGATGCACCTCCACCACTGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584954.1
CDS CCA 90 bp GGGTGCTGGCAGTGGTGGAGGTGCATCAAGCTGGGTCTGGTTGCTTaGATGAGGGTCTGTAGGAAGTCACCAGAAGGAGTGCCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: GCWQWWRCIKLGLVA*MRVCRKSPEGVPGG
Trigger: GCCTCCAGGCACTCCTTCTGGTGACTTCCTACAGACCCTCATCCAAGCAACCAGACCCAGCTTGATGCACCTCCACCACTGCCAGCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584954.1
CDS-3UTR CAA 90 bp GCAGCCCAGAGACCATTTAAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCTTCGGGCCCCACGGGTCATaGGAGGTGGCTTCCCGGACT +
Preference number: 5 (lower is better)
Translates to: AAQRPFKISPVPVRRVIFGPHGS*EVASRT
Trigger: AGTCCGGGAAGCCACCTCCAATGACCCGTGGGGCCC...GAAGATTACCCTTCGCACCGGCACAGGAGAGATCTTAAATGGTCTCTGGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CAA 90 bp AGCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTGGGCCCCACGGGTCATaGGAGGTGGCTTCCCGGACT +
Preference number: 5 (lower is better)
Translates to: SPNTPNPQTLGSRPTDESGPHGS*EVASRT
Trigger: AGTCCGGGAAGCCACCTCCAATGACCCGTGGGGCCC...ACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395620.6
CDS-3UTR CAA 90 bp AGCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTGGCCCGCCCCAGGGGTaGGTCTGGTTAGTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: SPNTPNPQTLGSRPTDESGPPQG*VWLVEA
Trigger: AGCCTCCACTAACCAGACCAACCCCTGGGGCGGGCC...ACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CAA 90 bp CTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGGCCCGCCCCAGGGGTaGGTCTGGTTAGTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: LIPLIPKLLDPVPQTRVPGPPQG*VWLVEA
Trigger: AGCCTCCACTAACCAGACCAACCCCTGGGGCGGGCC...AGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CAA 90 bp GTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGGGCAACAGGGACATGCACATGGAGGCAGCTGGCTaGGTACCAAACGATGGCCAG +
Preference number: 5 (lower is better)
Translates to: VAVAGGFMISAVGNRDMHMEAAG*VPNDGQ
Trigger: CTGGCCATCGTTTGGTACCAAGCCAGCTGCCTCCAT...GTGCATGTCCCTGTTGCCCACTGCACTGATCATGAAGCCACCGGCCACTGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CAA 90 bp CCAGGCCCTGCACCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCTCATGGAGGCAGCTGGCTaGGTACCAAACGATGGCCAG +
Preference number: 5 (lower is better)
Translates to: PGPAPSEGKHLSGQASCLMEAAG*VPNDGQ
Trigger: CTGGCCATCGTTTGGTACCAAGCCAGCTGCCTCCAT...GAGGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGTGCAGGGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CAA 90 bp CAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCAGGACTGCCTGAGACAGACACGGGCTaGGTGGTGGAGACTGCGCCC +
Preference number: 5 (lower is better)
Translates to: QKVSYGAGASSCPHPGLPETDTG*VVETAP
Trigger: GGGCGCAGTCTCCACCACCAAGCCCGTGTCTGTCTC...AGGCAGTCCTGGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CAA 90 bp AATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCGAGACAGACACGGGCTaGGTGGTGGAGACTGCGCCC +
Preference number: 5 (lower is better)
Translates to: NTPNPQTLGSRPTDESPCETDTG*VVETAP
Trigger: GGGCGCAGTCTCCACCACCAAGCCCGTGTCTGTCTC...GCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CAA 90 bp ACCACTTCCCCAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCCGGGCACTGCTGGGCTaGCTTGAGGCGACAGTCAGG +
Preference number: 5 (lower is better)
Translates to: TTSPKGVLWSRCFIVSTPRALLG*LEATVR
Trigger: CCTGACTGTCGCCTCAAGCAAGCCCAGCAGTGCCCG...GGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTGGGGAAGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CAA 90 bp CAACATCCTGGAGACCCTCGGGCTGAGGTTAGGGGCAAGGGCAACACTGATGACGAAGGAAAGGGTTGGTaGTGCCAGTGGCCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: QHPGDPRAEVRGKGNTDDEGKGW*CQWPGL
Trigger: CAGCCCAGGCCACTGGCACAACCAACCCTTTCCTTC...GTCATCAGTGTTGCCCTTGCCCCTAACCTCAGCCCGAGGGTCTCCAGGATGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CAA 90 bp GGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCTGGAGACGAAGGAAAGGGTTGGTaGTGCCAGTGGCCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: GQRQGHCPKSWARQHPGDEGKGW*CQWPGL
Trigger: CAGCCCAGGCCACTGGCACAACCAACCCTTTCCTTC...GTCTCCAGGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CAA 90 bp ATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCCCAGAGACCCCAGTGGCTGTCATGTaGGGGCCTCAAAGTCACATC +
Preference number: 5 (lower is better)
Translates to: MSGCSPHSEPACPSSPETPVAVM*GPQSHI
Trigger: GATGTGACTTTGAGGCCCCAACATGACAGCCACTGG...GGTCTCTGGGCTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CAA 90 bp CCTCCACCACGGTGCCCATCAGGAGGGAGCACGATGGCACAGGTGCAACATGCGCTCCTGTCCACAAGTTaGGTAACCTTCATCTGCCTC +
Preference number: 5 (lower is better)
Translates to: PPPRCPSGGSTMAQVQHALLSTS*VTFICL
Trigger: GAGGCAGATGAAGGTTACCAAACTTGTGGACAGGAG...CGCATGTTGCACCTGTGCCATCGTGCTCCCTCCTGATGGGCACCGTGGTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CAA 90 bp GCAGCCCAGAGACCATTTAAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCTTCGAGACAGACACGGGCTaGGTGGTGGAGACTGCGCCC +
Preference number: 5 (lower is better)
Translates to: AAQRPFKISPVPVRRVIFETDTG*VVETAP
Trigger: GGGCGCAGTCTCCACCACCAAGCCCGTGTCTGTCTC...GAAGATTACCCTTCGCACCGGCACAGGAGAGATCTTAAATGGTCTCTGGGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CAA 90 bp GCCCAGGCCCTGCACCGTCTGAAGGAAAGCACCTTTCTGGGCAAGCATCCTGCCGGGCTGGTAGTTCCATaGTTTTGGGATGGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: AQALHRLKESTFLGKHPAGLVVP*FWDGRE
Trigger: CTCTCTGCCATCCCAAAACAATGGAACTACCAGCCC...GGCAGGATGCTTGCCCAGAAAGGTGCTTTCCTTCAGACGGTGCAGGGCCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CAA 90 bp AGCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCGGGCACTGCTGGGCTaGCTTGAGGCGACAGTCAGG +
Preference number: 5 (lower is better)
Translates to: SPNTPNPQTLGSRPTDESRALLG*LEATVR
Trigger: CCTGACTGTCGCCTCAAGCAAGCCCAGCAGTGCCCG...ACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CAA 90 bp AGCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTTTCACCAGGGCCGCGTaGGGGCCCAGGAAGGACTCA +
Preference number: 5 (lower is better)
Translates to: SPNTPNPQTLGSRPTDESFTRAA*GPRKDS
Trigger: TGAGTCCTTCCTGGGCCCCAACGCGGCCCTGGTGAA...ACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CAA 90 bp GTGGGGAGGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCCCACCATGTTCATCATaGCAGGGCCCAGTGGTGTCA +
Preference number: 5 (lower is better)
Translates to: VGRTKTRPLSQVLGQATSPPCSS*QGPVVS
Trigger: TGACACCACTGGGCCCTGCAATGATGAACATGGTGG...GGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CAA 90 bp TCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCCCACCATGTTCATCATaGCAGGGCCCAGTGGTGTCA +
Preference number: 5 (lower is better)
Translates to: SPNSWIPSHRRESLLGILPPCSS*QGPVVS
Trigger: TGACACCACTGGGCCCTGCAATGATGAACATGGTGG...GAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CAA 90 bp CAGGAACAGCATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGCTAATCCCCAAACTCTaGGATCCCGTCCCACAGACG +
Preference number: 5 (lower is better)
Translates to: QEQHEWVQSPLRACMSQQLIPKL*DPVPQT
Trigger: CGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAG...CTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTCATGCTGTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CAA 90 bp GGGATGGCCTGTGCCAGAAGATGGGGCAGGGGGCTGTCTTCTTGGGTCCCGGTGAAGCATAGAGCCACGTaGGGGGTTATGCTCAGATTA +
Preference number: 5 (lower is better)
Translates to: GMACARRWGRGLSSWVPVKHRAT*GVMLRL
Trigger: TAATCTGAGCATAACCCCCAACGTGGCTCTATGCTT...CACCGGGACCCAAGAAGACAGCCCCCTGCCCCATCTTCTGGCACAGGCCATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CAA 90 bp CAGGAACAGCATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGGGGCTGGTAGTTCCATaGTTTTGGGATGGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: QEQHEWVQSPLRACMSQQGLVVP*FWDGRE
Trigger: CTCTCTGCCATCCCAAAACAATGGAACTACCAGCCC...CTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTCATGCTGTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CAA 90 bp CCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCCAGGGGCTGGTAGTTCCATaGTTTTGGGATGGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: PNSWIPSHRRESLLGILQGLVVP*FWDGRE
Trigger: CTCTCTGCCATCCCAAAACAATGGAACTACCAGCCC...CTGGAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CAA 90 bp GCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCGGCGACAGTCAGGGGTaGAGACTCAAAGGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: ALIPLIPKLLDPVPQTRVGDSQG*RLKGVR
Trigger: CCTGACCCCTTTGAGTCTCAACCCCTGACTGTCGCC...GACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CAA 90 bp AATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCGAAGGAAAGGGTTGGTaGTGCCAGTGGCCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: NTPNPQTLGSRPTDESPCEGKGW*CQWPGL
Trigger: CAGCCCAGGCCACTGGCACAACCAACCCTTTCCTTC...GCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CAA 90 bp GGCGAGGGTCTGAGGGTTGGGGCTGTAAAGACAGCCCTTTCATCAGGAAGCTGGCTAATCCCCAAACTCTaGGATCCCGTCCCACAGACG +
Preference number: 5 (lower is better)
Translates to: GEGLRVGAVKTALSSGSWLIPKL*DPVPQT
Trigger: CGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAG...CCAGCTTCCTGATGAAAGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS TCA 90 bp GCACTAGAGAAGGAAAGGGTTGGTTGTGCCAGTGGCCTGGGCTGCTaGTGGGGGTATACCCACACTGCCCACCATGTTCATCATTGCAGG +
Preference number: 5 (lower is better)
Translates to: ALEKERVGCASGLGC*WGYTHTAHHVHHCR
Trigger: CCTGCAATGATGAACATGGTGGGCAGTGTGGGTATACCCCCATCAGCAGCCCAGGCCACTGGCACAACCAACCCTTTCCTTCTCTAGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000571254.1
ENST00000575595.5
CDS CCA 90 bp ACTGAAGAGCTCAAAGGACCCTGGGTGGACACAGAAGCCAATGACTaGGGGCATCTCACAGGACTTCATGGCAACTCCACTGCCCAGTGC +
Preference number: 5 (lower is better)
Translates to: TEELKGPWVDTEAND*GHLTGLHGNSTAQC
Trigger: GCACTGGGCAGTGGAGTTGCCATGAAGTCCTGTGAGATGCCCCCAGTCATTGGCTTCTGTGTCCACCCAGGGTCCTTTGAGCTCTTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584954.1
CDS-3UTR CAA 90 bp CCCTTAGAGCTAGAGGTGAGAAATTCCCATGGTGGAAAAAGGGCCAGAAACATCGGCCCGCCCCAGGGGTaGGTCTGGTTAGTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: PLELEVRNSHGGKRARNIGPPQG*VWLVEA
Trigger: AGCCTCCACTAACCAGACCAACCCCTGGGGCGGGCC...GATGTTTCTGGCCCTTTTTCCACCATGGGAATTTCTCACCTCTAGCTCTAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CAA 90 bp AATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCATGGAGGCAGCTGGCTaGGTACCAAACGATGGCCAG +
Preference number: 5 (lower is better)
Translates to: NTPNPQTLGSRPTDESPCMEAAG*VPNDGQ
Trigger: CTGGCCATCGTTTGGTACCAAGCCAGCTGCCTCCAT...GCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CAA 90 bp AATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCGTTCTTGGGGACAGATaGTACGGTGGCTCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: NTPNPQTLGSRPTDESPCVLGDR*YGGSSG
Trigger: CCCACTGGAGCCACCGTACAATCTGTCCCCAAGAAC...GCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CAA 90 bp GCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCAGGGGTCCGAGTTCTaGGGGACAGATTGTACGGTG +
Preference number: 5 (lower is better)
Translates to: ALIPLIPKLLDPVPQTRVQGSEF*GTDCTV
Trigger: CACCGTACAATCTGTCCCCAAGAACTCGGACCCCTG...GACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CAA 90 bp GGCGAGGGTCTGAGGGTTGGGGCTGTAAAGACAGCCCTTTCATCAGGAAGCTGGGGGCTGGTAGTTCCATaGTTTTGGGATGGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: GEGLRVGAVKTALSSGSWGLVVP*FWDGRE
Trigger: CTCTCTGCCATCCCAAAACAATGGAACTACCAGCCC...CCAGCTTCCTGATGAAAGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CAA 90 bp CTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGGCGACAGTCAGGGGTaGAGACTCAAAGGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: LIPLIPKLLDPVPQTRVPGDSQG*RLKGVR
Trigger: CCTGACCCCTTTGAGTCTCAACCCCTGACTGTCGCC...AGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CAA 90 bp GTTCAAAACCAGCCACCGGCCTCTGGGACTGAGAAACAGCTGGGTGACTTCCTCCCAGTGGCTGTCATGTaGGGGCCTCAAAGTCACATC +
Preference number: 5 (lower is better)
Translates to: VQNQPPASGTEKQLGDFLPVAVM*GPQSHI
Trigger: GATGTGACTTTGAGGCCCCAACATGACAGCCACTGG...GAGGAAGTCACCCAGCTGTTTCTCAGTCCCAGAGGCCGGTGGCTGGTTTTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CAA 90 bp TGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTCTCCTGTCCACAAGTTaGGTAACCTTCATCTGCCTC +
Preference number: 5 (lower is better)
Translates to: WHRCNMRGSGRWLHDQCSLLSTS*VTFICL
Trigger: GAGGCAGATGAAGGTTACCAAACTTGTGGACAGGAG...ACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CAA 90 bp GCAGCCCAGAGACCATTTAAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCTTCGTTCTTGGGGACAGATaGTACGGTGGCTCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: AAQRPFKISPVPVRRVIFVLGDR*YGGSSG
Trigger: CCCACTGGAGCCACCGTACAATCTGTCCCCAAGAAC...GAAGATTACCCTTCGCACCGGCACAGGAGAGATCTTAAATGGTCTCTGGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CAA 90 bp CCCTTAGAGCTAGAGGTGAGAAATTCCCATGGTGGAAAAAGGGCCAGAAACATCTTCACCAGGGCCGCGTaGGGGCCCAGGAAGGACTCA +
Preference number: 5 (lower is better)
Translates to: PLELEVRNSHGGKRARNIFTRAA*GPRKDS
Trigger: TGAGTCCTTCCTGGGCCCCAACGCGGCCCTGGTGAA...GATGTTTCTGGCCCTTTTTCCACCATGGGAATTTCTCACCTCTAGCTCTAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CAA 90 bp ACCACTTCCCCAAAAGGTGTCTTATGGAGCCGGTGCTTCATCGTGTCCACACCCCCACCATGTTCATCATaGCAGGGCCCAGTGGTGTCA +
Preference number: 5 (lower is better)
Translates to: TTSPKGVLWSRCFIVSTPPPCSS*QGPVVS
Trigger: TGACACCACTGGGCCCTGCAATGATGAACATGGTGG...GGGTGTGGACACGATGAAGCACCGGCTCCATAAGACACCTTTTGGGGAAGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CAA 90 bp AATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCGAAACCTTCCTGTCCTaGGTAAGTGCGCACCCTATG +
Preference number: 5 (lower is better)
Translates to: NTPNPQTLGSRPTDESPCETFLS*VSAHPM
Trigger: CATAGGGTGCGCACTTACCAAGGACAGGAAGGTTTC...GCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395620.6
CDS-3UTR CAA 90 bp GCAGCCCAGAGACCATTTAAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCTTCCCACCATGTTCATCATaGCAGGGCCCAGTGGTGTCA +
Preference number: 5 (lower is better)
Translates to: AAQRPFKISPVPVRRVIFPPCSS*QGPVVS
Trigger: TGACACCACTGGGCCCTGCAATGATGAACATGGTGG...GAAGATTACCCTTCGCACCGGCACAGGAGAGATCTTAAATGGTCTCTGGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CAA 90 bp CTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTCCACCATGTTCATCATaGCAGGGCCCAGTGGTGTCA +
Preference number: 5 (lower is better)
Translates to: LIPLIPKLLDPVPQTRVPPPCSS*QGPVVS
Trigger: TGACACCACTGGGCCCTGCAATGATGAACATGGTGG...AGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CAA 90 bp GGGGAGGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCTGGTGGTGGTGTTTACTTaGAACTCACACGAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: GEDKDKATVPSPGPGNILVVVFT*NSHESK
Trigger: CTTTGACTCGTGTGAGTTCAAAGTAAACACCACCAC...CAGGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CAA 90 bp GGCGAGGGTCTGAGGGTTGGGGCTGTAAAGACAGCCCTTTCATCAGGAAGCTGGAAGCATAGAGCCACGTaGGGGGTTATGCTCAGATTA +
Preference number: 5 (lower is better)
Translates to: GEGLRVGAVKTALSSGSWKHRAT*GVMLRL
Trigger: TAATCTGAGCATAACCCCCAACGTGGCTCTATGCTT...CCAGCTTCCTGATGAAAGGGCTGTCTTTACAGCCCCAACCCTCAGACCCTCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CAA 90 bp AGCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCAGTGGCTGTCATGTaGGGGCCTCAAAGTCACATC +
Preference number: 5 (lower is better)
Translates to: SPNTPNPQTLGSRPTDESPVAVM*GPQSHI
Trigger: GATGTGACTTTGAGGCCCCAACATGACAGCCACTGG...ACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CAA 90 bp GGGGAGGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCTGACCTTCAAAACTGCTTaGGTCCACTGTGTTTCCGAA +
Preference number: 5 (lower is better)
Translates to: GEDKDKATVPSPGPGNILTFKTA*VHCVSE
Trigger: TTCGGAAACACAGTGGACCAAAGCAGTTTTGAAGGT...CAGGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395620.6
CDS-3UTR CAA 90 bp CGTCCAAGGCCTCAGAGGAGCCCTGCCAGGACCTCAGTGCTTTGGAGGAGGTGGTTTGAAGTCCGAAGGTaGTCAAATTCAGAAAAGTCA +
Preference number: 5 (lower is better)
Translates to: RPRPQRSPARTSVLWRRWFEVRR*SNSEKS
Trigger: TGACTTTTCTGAATTTGACAACCTTCGGACTTCAAA...CCACCTCCTCCAAAGCACTGAGGTCCTGGCAGGGCTCCTCTGAGGCCTTGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CAA 90 bp ACCGGCTTACCCAAATGGCAGCGGGAGCCTAAGACCCAGCCGCAGGCCTGCAGTTTTGAAGTCCGAAGGTaGTCAAATTCAGAAAAGTCA +
Preference number: 5 (lower is better)
Translates to: TGLPKWQREPKTQPQACSFEVRR*SNSEKS
Trigger: TGACTTTTCTGAATTTGACAACCTTCGGACTTCAAA...ACTGCAGGCCTGCGGCTGGGTCTTAGGCTCCCGCTGCCATTTGGGTAAGCCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CAA 90 bp CAGGAACAGCATGAGTGGGTGCAGTCCCCACTCAGAGCCTGCATGTCCCAGCAGGATTTAATTCAAGAGTaGTCCACGGTGGTGGTGTTT +
Preference number: 5 (lower is better)
Translates to: QEQHEWVQSPLRACMSQQDLIQE*STVVVF
Trigger: AAACACCACCACCGTGGACAACTCTTGAATTAAATC...CTGCTGGGACATGCAGGCTCTGAGTGGGGACTGCACCCACTCATGCTGTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CAA 90 bp GTGGGGAGGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCGATTTAATTCAAGAGTaGTCCACGGTGGTGGTGTTT +
Preference number: 5 (lower is better)
Translates to: VGRTKTRPLSQVLGQATSDLIQE*STVVVF
Trigger: AAACACCACCACCGTGGACAACTCTTGAATTAAATC...GGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CAA 90 bp GAGCCTAAGACCCAGCCGCAGGCCTGCAGTTCTGGCAGAAGGTGGCTGGTCAGGAATATTAGTGCATGTTaGTTAAAAATCCCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: EPKTQPQACSSGRRWLVRNISAC*LKIPPR
Trigger: CCTGGGAGGGATTTTTAACAAACATGCACTAATATT...CCTGACCAGCCACCTTCTGCCAGAACTGCAGGCCTGCGGCTGGGTCTTAGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS CCA 90 bp TGGGAAAGGGGTACACCCCACCTTTCCCACAGTGTTCCACCAGTGTaGTCCATCAACCAGATACATCAGAACTTCCTGGGAGTCTGTTCA +
Preference number: 5 (lower is better)
Translates to: WERGTPHLSHSVPPV*SINQIHQNFLGVCS
Trigger: TGAACAGACTCCCAGGAAGTTCTGATGTATCTGGTTGATGGACCACACTGGTGGAACACTGTGGGAAAGGTGGGGTGTACCCCTTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441293.2
CDS-3UTR CAA 90 bp CCCTTAGAGCTAGAGGTGAGAAATTCCCATGGTGGAAAAAGGGCCAGAAACATCCAGGGGTCCGAGTTCTaGGGGACAGATTGTACGGTG +
Preference number: 5 (lower is better)
Translates to: PLELEVRNSHGGKRARNIQGSEF*GTDCTV
Trigger: CACCGTACAATCTGTCCCCAAGAACTCGGACCCCTG...GATGTTTCTGGCCCTTTTTCCACCATGGGAATTTCTCACCTCTAGCTCTAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CAA 90 bp TGGCACAGGTGCAACATGCGTGGCAGTGGCCGGTGGCTTCATGATCAGTGCAGTGATTTAATTCAAGAGTaGTCCACGGTGGTGGTGTTT +
Preference number: 5 (lower is better)
Translates to: WHRCNMRGSGRWLHDQCSDLIQE*STVVVF
Trigger: AAACACCACCACCGTGGACAACTCTTGAATTAAATC...ACTGCACTGATCATGAAGCCACCGGCCACTGCCACGCATGTTGCACCTGTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CAA 90 bp CAACATCCTGGAGACCCTCGGGCTGAGGTTAGGGGCAAGGGCAACACTGATGACGATTTAATTCAAGAGTaGTCCACGGTGGTGGTGTTT +
Preference number: 5 (lower is better)
Translates to: QHPGDPRAEVRGKGNTDDDLIQE*STVVVF
Trigger: AAACACCACCACCGTGGACAACTCTTGAATTAAATC...GTCATCAGTGTTGCCCTTGCCCCTAACCTCAGCCCGAGGGTCTCCAGGATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CAA 90 bp GGGGAGGACAAAGACAAGGCCACTGTCCCAAGTCCTGGGCCAGGCAACATCCTGTTTGAAGTCCGAAGGTaGTCAAATTCAGAAAAGTCA +
Preference number: 5 (lower is better)
Translates to: GEDKDKATVPSPGPGNILFEVRR*SNSEKS
Trigger: TGACTTTTCTGAATTTGACAACCTTCGGACTTCAAA...CAGGATGTTGCCTGGCCCAGGACTTGGGACAGTGGCCTTGTCTTTGTCCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CAA 90 bp TCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGCTCGGCATCCTCTTTGAAGTCCGAAGGTaGTCAAATTCAGAAAAGTCA +
Preference number: 5 (lower is better)
Translates to: SPNSWIPSHRRESLLGILFEVRR*SNSEKS
Trigger: TGACTTTTCTGAATTTGACAACCTTCGGACTTCAAA...GAGGATGCCGAGCAGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000575595.5
CDS-3UTR CAA 90 bp GCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCTCCAGAAAATTCTCCTaGACAACCACTTTTCGCCTG +
Preference number: 5 (lower is better)
Translates to: ALIPLIPKLLDPVPQTRVSRKFS*TTTFRL
Trigger: CAGGCGAAAAGTGGTTGTCAAGGAGAATTTTCTGGA...GACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395620.6
CDS-3UTR CAA 90 bp TTAGGGGCAAGGGCAACACTGATGACTCCACGTCCTCGTCCAAGGCCTCAGAGGTGGGGGAAGCTGATCTaGGCAGATTTAAAATTACAT +
Preference number: 5 (lower is better)
Translates to: LGARATLMTPRPRPRPQRWGKLI*ADLKLH
Trigger: ATGTAATTTTAAATCTGCCAAGATCAGCTTCCCCCA...CCTCTGAGGCCTTGGACGAGGACGTGGAGTCATCAGTGTTGCCCTTGCCCCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395620.6
CDS-3UTR CAA 90 bp GCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCTGGCTATTTTATGGGTaGTCTTTTCACTGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: ALIPLIPKLLDPVPQTRVWLFYG*SFHCLA
Trigger: TGCCAGGCAGTGAAAAGACAACCCATAAAATAGCCA...GACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000395620.6
CDS CCA 90 bp GTGTTCCACCAGTGTGGTCCATCAACCAGATACATCAGAACTTCCTaGGAGTCTGTTCAAAAATCCAGTCATTCTGGGGGCAGAGCTGAG +
Preference number: 5 (lower is better)
Translates to: VFHQCGPSTRYIRTS*ESVQKSSHSGGRAE
Trigger: CTCAGCTCTGCCCCCAGAATGACTGGATTTTTGAACAGACTCCCAGGAAGTTCTGATGTATCTGGTTGATGGACCACACTGGTGGAACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000441293.2
ENST00000582659.5
CDS-3UTR CAA 90 bp ACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAAGAAAAATAAAATATGCAGTCTGGGGCCGGGCTaGCTCCAGCTCGGAGGACAC +
Preference number: 5 (lower is better)
Translates to: TVVVFTLNSHESKKNKICSLGPG*LQLGGH
Trigger: GTGTCCTCCGAGCTGGAGCAAGCCCGGCCCCAGACT...GCATATTTTATTTTTCTTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CAA 90 bp CTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCCCTGTGGTGGTGTTTACTTaGAACTCACACGAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: LIPLIPKLLDPVPQTRVPVVVFT*NSHESK
Trigger: CTTTGACTCGTGTGAGTTCAAAGTAAACACCACCAC...AGGGACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS GCA 90 bp CAATACTCCGCAATCCTCAATTCACTGGCTTTATCTTTCCTGAGGTaGAGTCCACGAGTGAGGAAACATCTCCATCTTCCTCTGCTCCTC +
Preference number: 5 (lower is better)
Translates to: QYSAILNSLALSFLR*SPRVRKHLHLPLLL
Trigger: GAGGAGCAGAGGAAGATGGAGATGTTTCCTCACTCGTGGACTGCACCTCAGGAAAGATAAAGCCAGTGAATTGAGGATTGCGGAGTATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582659.5
CDS-3UTR CAA 90 bp AATTCAAGAGTTGTCCACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAAAGTTCTTGGGGACAGATaGTACGGTGGCTCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: NSRVVHGGGVYFELTRVKVLGDR*YGGSSG
Trigger: CCCACTGGAGCCACCGTACAATCTGTCCCCAAGAAC...TTTGACTCGTGTGAGTTCAAAGTAAACACCACCACCGTGGACAACTCTTGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CAA 90 bp ACACGTGCCAACATCTTCATTCAGCCAGACCTGGTAAATTCTATCAAAACTAGAGAAGGAAAGGGTTGGTaGTGCCAGTGGCCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: TRANIFIQPDLVNSIKTREGKGW*CQWPGL
Trigger: CAGCCCAGGCCACTGGCACAACCAACCCTTTCCTTC...TCTAGTTTTGATAGAATTTACCAGGTCTGGCTGAATGAAGATGTTGGCACGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS CCA 90 bp AGCTTGATTTGGATGTTCCATGCTGTGTATTTTGGTTCCTTCAGCTaGGACGCTGGGTGTAACGCTGAGGCTGCAAGAGTTGAAACATGT +
Preference number: 5 (lower is better)
Translates to: SLIWMFHAVYFGSFS*DAGCNAEAARVETC
Trigger: ACATGTTTCAACTCTTGCAGCCTCAGCGTTACACCCAGCGTCCCAGCTGAAGGAACCAAAATACACAGCATGGAACATCCAAATCAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495155.5
CDS-3UTR CAA 90 bp ACACGTGCCAACATCTTCATTCAGCCAGACCTGGTAAATTCTATCAAAACTAGACAGGGGTCCGAGTTCTaGGGGACAGATTGTACGGTG +
Preference number: 5 (lower is better)
Translates to: TRANIFIQPDLVNSIKTRQGSEF*GTDCTV
Trigger: CACCGTACAATCTGTCCCCAAGAACTCGGACCCCTG...TCTAGTTTTGATAGAATTTACCAGGTCTGGCTGAATGAAGATGTTGGCACGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CAA 90 bp GCCCTAATACCCCTAATCCCCAAACTCTTGGATCCCGTCCCACAGACGAGAGTCAATATTAGTGCATGTTaGTTAAAAATCCCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: ALIPLIPKLLDPVPQTRVNISAC*LKIPPR
Trigger: CCTGGGAGGGATTTTTAACAAACATGCACTAATATT...GACTCTCGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAGGGGTATTAGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CAA 90 bp ATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACGGTGGTATGGAGGCAGCTGGCTaGGTACCAAACGATGGCCAG +
Preference number: 5 (lower is better)
Translates to: ISFKARSSGFNSRVVHGGMEAAG*VPNDGQ
Trigger: CTGGCCATCGTTTGGTACCAAGCCAGCTGCCTCCAT...ACCACCGTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CAA 90 bp ATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACGGTGGTGTTCTTGGGGACAGATaGTACGGTGGCTCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: ISFKARSSGFNSRVVHGGVLGDR*YGGSSG
Trigger: CCCACTGGAGCCACCGTACAATCTGTCCCCAAGAAC...ACCACCGTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CAA 90 bp GCAGCCCAGAGACCATTTAAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCTTCTTTGAAGTCCGAAGGTaGTCAAATTCAGAAAAGTCA +
Preference number: 5 (lower is better)
Translates to: AAQRPFKISPVPVRRVIFFEVRR*SNSEKS
Trigger: TGACTTTTCTGAATTTGACAACCTTCGGACTTCAAA...GAAGATTACCCTTCGCACCGGCACAGGAGAGATCTTAAATGGTCTCTGGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CAA 90 bp CCCTTAGAGCTAGAGGTGAGAAATTCCCATGGTGGAAAAAGGGCCAGAAACATCGTGGTGGTGTTTACTTaGAACTCACACGAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: PLELEVRNSHGGKRARNIVVVFT*NSHESK
Trigger: CTTTGACTCGTGTGAGTTCAAAGTAAACACCACCAC...GATGTTTCTGGCCCTTTTTCCACCATGGGAATTTCTCACCTCTAGCTCTAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000347697.6
CDS-3UTR CAA 90 bp GCAGCCCAGAGACCATTTAAGATCTCTCCTGTGCCGGTGCGAAGGGTAATCTTCAATATTAGTGCATGTTaGTTAAAAATCCCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: AAQRPFKISPVPVRRVIFNISAC*LKIPPR
Trigger: CCTGGGAGGGATTTTTAACAAACATGCACTAATATT...GAAGATTACCCTTCGCACCGGCACAGGAGAGATCTTAAATGGTCTCTGGGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395626.5
CDS-3UTR CAA 90 bp ATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACGGTGGTCTAATCCCCAAACTCTaGGATCCCGTCCCACAGACG +
Preference number: 5 (lower is better)
Translates to: ISFKARSSGFNSRVVHGGLIPKL*DPVPQT
Trigger: CGTCTGTGGGACGGGATCCAAGAGTTTGGGGATTAG...ACCACCGTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CAA 90 bp TTAATTCAAGAGTTGTCCACGGTGGTGGTGTTTACTTTGAACTCACACGAGTCAGATAAAGACCTCCACTaGGCTTTCAGAAGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: LIQELSTVVVFTLNSHESDKDLH*AFRSLQ
Trigger: CTGGAGGCTTCTGAAAGCCAAGTGGAGGTCTTTATC...TGACTCGTGTGAGTTCAAAGTAAACACCACCACCGTGGACAACTCTTGAATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395620.6
CDS-3UTR CAA 90 bp ATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACGGTGGTGAAACCTTCCTGTCCTaGGTAAGTGCGCACCCTATG +
Preference number: 5 (lower is better)
Translates to: ISFKARSSGFNSRVVHGGETFLS*VSAHPM
Trigger: CATAGGGTGCGCACTTACCAAGGACAGGAAGGTTTC...ACCACCGTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395620.6
CDS-3UTR CAA 90 bp GCTCAGATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACCTCCTGTCCACAAGTTaGGTAACCTTCATCTGCCTC +
Preference number: 5 (lower is better)
Translates to: AQISFKARSSGFNSRVVHLLSTS*VTFICL
Trigger: GAGGCAGATGAAGGTTACCAAACTTGTGGACAGGAG...GTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAATCTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395620.6
CDS-3UTR CAA 90 bp ACACGTGCCAACATCTTCATTCAGCCAGACCTGGTAAATTCTATCAAAACTAGAAAGCATAGAGCCACGTaGGGGGTTATGCTCAGATTA +
Preference number: 5 (lower is better)
Translates to: TRANIFIQPDLVNSIKTRKHRAT*GVMLRL
Trigger: TAATCTGAGCATAACCCCCAACGTGGCTCTATGCTT...TCTAGTTTTGATAGAATTTACCAGGTCTGGCTGAATGAAGATGTTGGCACGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CAA 90 bp ACACGTGCCAACATCTTCATTCAGCCAGACCTGGTAAATTCTATCAAAACTAGAAAATGGGAGGATTACTaGAGGCCAGCCTGGTCAAAA +
Preference number: 5 (lower is better)
Translates to: TRANIFIQPDLVNSIKTRKWEDY*RPAWSK
Trigger: TTTTGACCAGGCTGGCCTCAAGTAATCCTCCCATTT...TCTAGTTTTGATAGAATTTACCAGGTCTGGCTGAATGAAGATGTTGGCACGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395620.6
CDS-3UTR CAA 90 bp ATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACGGTGGTAAGCATAGAGCCACGTaGGGGGTTATGCTCAGATTA +
Preference number: 5 (lower is better)
Translates to: ISFKARSSGFNSRVVHGGKHRAT*GVMLRL
Trigger: TAATCTGAGCATAACCCCCAACGTGGCTCTATGCTT...ACCACCGTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CAA 90 bp GCTCAGATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACGTGGTGGTGTTTACTTaGAACTCACACGAGTCAAAG +
Preference number: 5 (lower is better)
Translates to: AQISFKARSSGFNSRVVHVVVFT*NSHESK
Trigger: CTTTGACTCGTGTGAGTTCAAAGTAAACACCACCAC...GTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAATCTGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS-3UTR CAA 90 bp GCTCAGATTAGTTTTAAAGCTCGCTCTAGTGGATTTAATTCAAGAGTTGTCCACTTTGAAGTCCGAAGGTaGTCAAATTCAGAAAAGTCA +
Preference number: 5 (lower is better)
Translates to: AQISFKARSSGFNSRVVHFEVRR*SNSEKS
Trigger: TGACTTTTCTGAATTTGACAACCTTCGGACTTCAAA...GTGGACAACTCTTGAATTAAATCCACTAGAGCGAGCTTTAAAACTAATCTGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
CDS CCA 72 bp GTGGCTCGGGCTGCGCGGTCACAAGTGAGGCAGGGCTaGGACCAGTCGCCATTTGGGCGGGAGGCCAGCCCC +
Preference number: 6 (lower is better)
Translates to: VARAARSQVRQG*DQSPFGREASP
Trigger: GGGGCTGGCCTCCCGCCCAAATGGCGACTGGTCCCAGCCCTGCCTCACTTGTGACCGCGCAGCCCGAGCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000395626.5
CDS GCA 72 bp CAGCTCGGAGGACACTCGCGGGGAGGTGGCTCGGGCTaGGCGGTCACAAGTGAGGCAGGGCTGGGACCAGTC +
Preference number: 6 (lower is better)
Translates to: QLGGHSRGGGSG*AVTSEAGLGPV
Trigger: GACTGGTCCCAGCCCTGCCTCACTTGTGACCGCGCAGCCCGAGCCACCTCCCCGCGAGTGTCCTCCGAGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314728.9
ENST00000395626.5
CDS CCA 72 bp GCTGTGGGGCCGCGGAGGTCATCGAGGCCACAGCCATaGACTCCACTCCTGGGCCAGGCCCAAAGGATGTGC +
Preference number: 6 (lower is better)
Translates to: AVGPRRSSRPQP*TPLLGQAQRMC
Trigger: GCACATCCTTTGGGCCTGGCCCAGGAGTGGAGTCCATGGCTGTGGCCTCGATGACCTCCGCGGCCCCACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000571254.1
ENST00000575595.5
CDS CAA 72 bp CTGAAGCTCCTCTTCTCCACTAGTCTGGGGCCGGGCTaGCTCCAGCTCGGAGGACACTCGCGGGGAGGTGGA +
Preference number: 6 (lower is better)
Translates to: LKLLFSTSLGPG*LQLGGHSRGGG
Trigger: TCCACCTCCCCGCGAGTGTCCTCCGAGCTGGAGCAAGCCCGGCCCCAGACTAGTGGAGAAGAGGAGCTTCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347697.6
ENST00000395620.6
ENST00000395628.6
ENST00000495155.5
ENST00000571254.1
CDS GCA 72 bp AGACGAGAGTCCCTGCTCGGCATCCTCCAGCACAGGTaGTCTGGGTGGGTCCCAGGCCCAGGCACTAGAGAA +
Preference number: 6 (lower is better)
Translates to: RRESLLGILQHR*SGWVPGPGTRE
Trigger: TTCTCTAGTGCCTGGGCCTGGGACCCACCCAGAGCACCTGTGCTGGAGGATGCCGAGCAGGGACTCTCGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000571254.1
ENST00000575595.5
CDS CCA 72 bp AGCTGGTTCAGTGTCAGCGGCTGGGGCTGGTTCACCTaGAAAGGGTTAACAGGGGCCGAGGTGGCGGGAGCA +
Preference number: 6 (lower is better)
Translates to: SWFSVSGWGWFT*KGLTGAEVAGA
Trigger: TGCTCCCGCCACCTCGGCCCCTGTTAACCCTTTCCAGGTGAACCAGCCCCAGCCGCTGACACTGAACCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000571254.1
ENST00000575595.5
CDS CCA 72 bp ACTGGGCTCCCCCGAAGCTGGTTCAGTGTCAGCGGCTaGGGCTGGTTCACCTGGAAAGGGTTAACAGGGGCC +
Preference number: 6 (lower is better)
Translates to: TGLPRSWFSVSG*GWFTWKGLTGA
Trigger: GGCCCCTGTTAACCCTTTCCAGGTGAACCAGCCCCAGCCGCTGACACTGAACCAGCTTCGGGGGAGCCCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000571254.1
ENST00000575595.5
CDS CCA 72 bp CATGGCAACTCCACTGCCCAGTGCACACCCTCAGGATaGGCTGGCAACAGGGGCCTCTCCCCGCTTACCCTA +
Preference number: 6 (lower is better)
Translates to: HGNSTAQCTPSG*AGNRGLSPLTL
Trigger: TAGGGTAAGCGGGGAGAGGCCCCTGTTGCCAGCCCATCCTGAGGGTGTGCACTGGGCAGTGGAGTTGCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584954.1
CDS CAA 72 bp GCAGGCTGCTGTGAAGCTGCCCAGGGGTCCGAGTTCTaGGGGACAGATTGTACGGTGGCTCCAGTGGGCACC +
Preference number: 6 (lower is better)
Translates to: AGCCEAAQGSEF*GTDCTVAPVGT
Trigger: GGTGCCCACTGGAGCCACCGTACAATCTGTCCCCAAGAACTCGGACCCCTGGGCAGCTTCACAGCAGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000395626.5
ENST00000395628.6
ENST00000494192.6
ENST00000571254.1
ENST00000572627.6
ENST00000575595.5
ENST00000585097.1
CDS GCA 72 bp GGACCCAGAGACAGACACGGGCTTGGTGGTGGAGACTaGGCCCCACGCGTCAGAAGCTCTTTTCCCAGCACT +
Preference number: 6 (lower is better)
Translates to: GPRDRHGLGGGD*APRVRSSFPST
Trigger: AGTGCTGGGAAAAGAGCTTCTGACGCGTGGGGCGCAGTCTCCACCACCAAGCCCGTGTCTGTCTCTGGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000395626.5
ENST00000395628.6
ENST00000494192.6
ENST00000571254.1
ENST00000572627.6
ENST00000575595.5
ENST00000585097.1
CDS CCA 72 bp GTGGGCCCAGGGCAGTCTTCTCTCTCAACACCCAGGTaGAAGCCCCCTCAATTTGGAGGGAGGTACCAGCGC +
Preference number: 6 (lower is better)
Translates to: VGPGQSSLSTPR*KPPQFGGRYQR
Trigger: GCGCTGGTACCTCCCTCCAAATTGAGGGGGCTTCCACCTGGGTGTTGAGAGAGAAGACTGCCCTGGGCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584954.1
CDS GCA 72 bp CAGTGGCCTGGGCTGCTGATGGGGGTATACCCACACTaGCCACCATGTTCATCATTGCAGGGCCCAGTGGTG +
Preference number: 6 (lower is better)
Translates to: QWPGLLMGVYPH*PPCSSLQGPVV
Trigger: CACCACTGGGCCCTGCAATGATGAACATGGTGGGCAGTGTGGGTATACCCCCATCAGCAGCCCAGGCCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000571254.1
ENST00000575595.5
CDS GCA 72 bp CCAGGCCCAGGCACTAGAGAAGGAAAGGGTTGGTTGTaGCAGTGGCCTGGGCTGCTGATGGGGGTATACCCA +
Preference number: 6 (lower is better)
Translates to: PGPGTREGKGWL*QWPGLLMGVYP
Trigger: TGGGTATACCCCCATCAGCAGCCCAGGCCACTGGCACAACCAACCCTTTCCTTCTCTAGTGCCTGGGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000571254.1
ENST00000575595.5
CDS GCA 72 bp CATCTCACAGGACTTCATGGCAACTCCACTGCCCAGTaGACACCCTCAGGATGGGCTGGCAACAGGGGCCTC +
Preference number: 6 (lower is better)
Translates to: HLTGLHGNSTAQ*TPSGWAGNRGL
Trigger: GAGGCCCCTGTTGCCAGCCCATCCTGAGGGTGTGCACTGGGCAGTGGAGTTGCCATGAAGTCCTGTGAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584954.1
CDS GCA 72 bp CTGGGGGCATCTCACAGGACTTCATGGCAACTCCACTaGCCAGTGCACACCCTCAGGATGGGCTGGCAACAG +
Preference number: 6 (lower is better)
Translates to: LGASHRTSWQLH*PVHTLRMGWQQ
Trigger: CTGTTGCCAGCCCATCCTGAGGGTGTGCACTGGGCAGTGGAGTTGCCATGAAGTCCTGTGAGATGCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584954.1
CDS CCA 72 bp GCTCAAAGGACCCAGAGACAGACACGGGCTTGGTGGTaGAGACTGCGCCCCACGCGTCAGAAGCTCTTTTCC +
Preference number: 6 (lower is better)
Translates to: AQRTQRQTRAWW*RLRPTRQKLFS
Trigger: GGAAAAGAGCTTCTGACGCGTGGGGCGCAGTCTCCACCACCAAGCCCGTGTCTGTCTCTGGGTCCTTTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000395626.5
ENST00000395628.6
ENST00000494192.6
ENST00000571254.1
ENST00000572627.6
ENST00000575595.5
ENST00000585097.1
CDS CCA 72 bp CACACTGCCCACCATGTTCATCATTGCAGGGCCCAGTaGTGTCAGAGAGGAACCAGTGGCCCCCAGAGCTGG +
Preference number: 6 (lower is better)
Translates to: HTAHHVHHCRAQ*CQRGTSGPQSW
Trigger: CCAGCTCTGGGGGCCACTGGTTCCTCTCTGACACCACTGGGCCCTGCAATGATGAACATGGTGGGCAGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000571254.1
ENST00000575595.5
CDS CCA 72 bp GAGGGCAAGGGCCAGTTGGATATCACTGCTGAGGGCTaGAGGAGCCTGGACACCCACCACAATCGACCAGAC +
Preference number: 6 (lower is better)
Translates to: EGKGQLDITAEG*RSLDTHHNRPD
Trigger: GTCTGGTCGATTGTGGTGGGTGTCCAGGCTCCTCCAGCCCTCAGCAGTGATATCCAACTGGCCCTTGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495155.5
CDS CCA 72 bp AGAGCTCAAAGGACCCAGAGACAGACACGGGCTTGGTaGTGGAGACTGCGCCCCACGCGTCAGAAGCTCTTT +
Preference number: 6 (lower is better)
Translates to: RAQRTQRQTRAW*WRLRPTRQKLF
Trigger: AAAGAGCTTCTGACGCGTGGGGCGCAGTCTCCACCACCAAGCCCGTGTCTGTCTCTGGGTCCTTTGAGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000395626.5
ENST00000395628.6
ENST00000494192.6
ENST00000571254.1
ENST00000572627.6
ENST00000575595.5
ENST00000585097.1
CDS CCA 72 bp CCAGGCACTAGAGAAGGAAAGGGTTGGTTGTGCCAGTaGCCTGGGCTGCTGATGGGGGTATACCCACACTGC +
Preference number: 6 (lower is better)
Translates to: PGTREGKGWLCQ*PGLLMGVYPHC
Trigger: GCAGTGTGGGTATACCCCCATCAGCAGCCCAGGCCACTGGCACAACCAACCCTTTCCTTCTCTAGTGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000571254.1
ENST00000575595.5
CDS CCA 72 bp ATGCCACCATCCTCAAGGAGGAGGGCAAGGGCCAGTTaGATATCACTGCTGAGGGCTGGAGGAGCCTGGACA +
Preference number: 6 (lower is better)
Translates to: MPPSSRRRARAS*ISLLRAGGAWT
Trigger: TGTCCAGGCTCCTCCAGCCCTCAGCAGTGATATCCAACTGGCCCTTGCCCTCCTCCTTGAGGATGGTGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495155.5
CDS TCA 72 bp GCACTGCTGGGCTTGCTTGAGGCGACAGTCAGGGGTTaGGACTCAAAGGGGTCAGGGCTGGTAGTTCCATTG +
Preference number: 6 (lower is better)
Translates to: ALLGLLEATVRG*DSKGSGLVVPL
Trigger: CAATGGAACTACCAGCCCTGACCCCTTTGAGTCTCAACCCCTGACTGTCGCCTCAAGCAAGCCCAGCAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000494192.6
ENST00000571254.1
ENST00000575595.5
ENST00000585097.1
CDS GCA 72 bp GGAAGGACTCAGGTGTTTTCCGGGCACTGCTGGGCTTaGTTGAGGCGACAGTCAGGGGTTGAGACTCAAAGG +
Preference number: 6 (lower is better)
Translates to: GRTQVFSGHCWA*LRRQSGVETQR
Trigger: CCTTTGAGTCTCAACCCCTGACTGTCGCCTCAAGCAAGCCCAGCAGTGCCCGGAAAACACCTGAGTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000494192.6
ENST00000571254.1
ENST00000575595.5
CDS GCA 72 bp TGGGGGTATACCCACACTGCCCACCATGTTCATCATTaGAGGGCCCAGTGGTGTCAGAGAGGAACCAGTGGC +
Preference number: 6 (lower is better)
Translates to: WGYTHTAHHVHH*RAQWCQRGTSG
Trigger: GCCACTGGTTCCTCTCTGACACCACTGGGCCCTGCAATGATGAACATGGTGGGCAGTGTGGGTATACCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000571254.1
ENST00000575595.5
CDS TCA 72 bp AAGGAAAGGGTTGGTTGTGCCAGTGGCCTGGGCTGCTaGTGGGGGTATACCCACACTGCCCACCATGTTCAT +
Preference number: 6 (lower is better)
Translates to: KERVGCASGLGC*WGYTHTAHHVH
Trigger: ATGAACATGGTGGGCAGTGTGGGTATACCCCCATCAGCAGCCCAGGCCACTGGCACAACCAACCCTTTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000571254.1
ENST00000575595.5
CDS TCA 72 bp TTGCAGGGACTGGTGGTAGTGATGGTTGATGTCCGCTaGGCCTCATCTAAGCAGCACTGCGGGATGGGCAGT +
Preference number: 6 (lower is better)
Translates to: LQGLVVVMVDVR*ASSKQHCGMGS
Trigger: ACTGCCCATCCCGCAGTGCTGCTTAGATGAGGCTCAGCGGACATCAACCATCACTACCACCAGTCCCTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441293.2
CDS TCA 72 bp GGTGGAGGTGCATCAAGCTGGGTCTGGTTGCTTGGATaGGGGTCTGTAGGAAGTCACCAGAAGGAGTGCCTG +
Preference number: 6 (lower is better)
Translates to: GGGASSWVWLLG*GSVGSHQKECL
Trigger: CAGGCACTCCTTCTGGTGACTTCCTACAGACCCTCATCCAAGCAACCAGACCCAGCTTGATGCACCTCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584954.1
CDS TCA 72 bp CTCTCCCCGCTTACCCTACCTCATGGAGGAGAATTCTaGGAGCCAAAGAGGCAAGACAGCCTGGGGTCACCA +
Preference number: 6 (lower is better)
Translates to: LSPLTLPHGGEF*EPKRQDSLGSP
Trigger: TGGTGACCCCAGGCTGTCTTGCCTCTTTGGCTCTCAGAATTCTCCTCCATGAGGTAGGGTAAGCGGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584954.1
CDS CCA 72 bp TGGCAACAGGGGCCTCTCCCCGCTTACCCTACCTCATaGAGGAGAATTCTGAGAGCCAAAGAGGCAAGACAG +
Preference number: 6 (lower is better)
Translates to: WQQGPLPAYPTS*RRILRAKEARQ
Trigger: CTGTCTTGCCTCTTTGGCTCTCAGAATTCTCCTCCATGAGGTAGGGTAAGCGGGGAGAGGCCCCTGTTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584954.1
CDS TCA 72 bp GAGCTGAGGGGGTGCCACTCTCTTAAGCCCCCATGGTaGTTTCTAGGCATGCTGGAGTCAGTGTCATGGTGT +
Preference number: 6 (lower is better)
Translates to: ELRGCHSLKPPW*FLGMLESVSWC
Trigger: ACACCATGACACTGACTCCAGCATGCCTAGAAATCACCATGGGGGCTTAAGAGAGTGGCACCCCCTCAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000441293.2
ENST00000582659.5
CDS CCA 72 bp CAGTGGTGGAGGTGCATCAAGCTGGGTCTGGTTGCTTaGATGAGGGTCTGTAGGAAGTCACCAGAAGGAGTG +
Preference number: 6 (lower is better)
Translates to: QWWRCIKLGLVA*MRVCRKSPEGV
Trigger: CACTCCTTCTGGTGACTTCCTACAGACCCTCATCCAAGCAACCAGACCCAGCTTGATGCACCTCCACCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584954.1
CDS GCA 72 bp TCCCAGGATCTGAGAGCCACTCTGCCTTCCCACCTGTaGCTCCAGGAGGTCACATCTAACTCTTTCCATAGT +
Preference number: 6 (lower is better)
Translates to: SQDLRATLPSHL*LQEVTSNSFHS
Trigger: ACTATGGAAAGAGTTAGATGTGACCTCCTGGAGGCACAGGTGGGAAGGCAGAGTGGCTCTCAGATCCTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441293.2
CDS CCA 72 bp GGTACACCCCACCTTTCCCACAGTGTTCCACCAGTGTaGTCCATCAACCAGATACATCAGAACTTCCTGGGA +
Preference number: 6 (lower is better)
Translates to: GTPHLSHSVPPV*SINQIHQNFLG
Trigger: TCCCAGGAAGTTCTGATGTATCTGGTTGATGGACCACACTGGTGGAACACTGTGGGAAAGGTGGGGTGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441293.2
CDS CCA 72 bp TGGATGTTCCATGCTGTGTATTTTGGTTCCTTCAGCTaGGACGCTGGGTGTAACGCTGAGGCTGCAAGAGTT +
Preference number: 6 (lower is better)
Translates to: WMFHAVYFGSFS*DAGCNAEAARV
Trigger: AACTCTTGCAGCCTCAGCGTTACACCCAGCGTCCCAGCTGAAGGAACCAAAATACACAGCATGGAACATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495155.5
CDS TCA 72 bp CTGGAGTCAGTGTCATGGTGTCCACTGCAGGACACCTaGATGTGTGCAATACTCCGCAATCCTCAATTCACT +
Preference number: 6 (lower is better)
Translates to: LESVSWCPLQDT*MCAILRNPQFT
Trigger: AGTGAATTGAGGATTGCGGAGTATTGCACACATTCAGGTGTCCTGCAGTGGACACCATGACACTGACTCCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441293.2
ENST00000582659.5
CDS CCA 72 bp GACTCAAAGGGGTCAGGGCTGGTAGTTCCATTGTTTTaGGATGGCAGAGAGGTCACAGATTCGGCTGTTTTT +
Preference number: 6 (lower is better)
Translates to: DSKGSGLVVPLF*DGREVTDSAVF
Trigger: AAAAACAGCCGAATCTGTGACCTCTCTGCCATCCCAAAACAATGGAACTACCAGCCCTGACCCCTTTGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000494192.6
ENST00000571254.1
ENST00000575595.5
ENST00000585097.1
CDS CAA 72 bp AGACTCAAAGGGGTCAGGGCTGGTAGTTCCATTGTTTaGGGATGGCAGAGAGGTCACAGATTCGGCTGTTTT +
Preference number: 6 (lower is better)
Translates to: RLKGVRAGSSIV*GWQRGHRFGCF
Trigger: AAAACAGCCGAATCTGTGACCTCTCTGCCATCCCAAAACAATGGAACTACCAGCCCTGACCCCTTTGAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000314728.9
ENST00000347697.6
ENST00000395618.7
ENST00000395620.6
ENST00000494192.6
ENST00000571254.1
ENST00000575595.5
ENST00000585097.1
CDS TCA 72 bp AGAAGGCACAAGCCATTTCTGATGCAAATGGGAGGTTaGGGGGAGGTTGACTTTCCTTCTCCCAAAGCAGAA +
Preference number: 6 (lower is better)
Translates to: RRHKPFLMQMGG*GEVDFPSPKAE
Trigger: TTCTGCTTTGGGAGAAGGAAAGTCAACCTCCCCTCAACCTCCCATTTGCATCAGAAATGGCTTGTGCCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495155.5
CDS GCA 72 bp GCAATCCTCAATTCACTGGCTTTATCTTTCCTGAGGTaGAGTCCACGAGTGAGGAAACATCTCCATCTTCCT +
Preference number: 6 (lower is better)
Translates to: AILNSLALSFLR*SPRVRKHLHLP
Trigger: AGGAAGATGGAGATGTTTCCTCACTCGTGGACTGCACCTCAGGAAAGATAAAGCCAGTGAATTGAGGATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441293.2
ENST00000582659.5
CDS GCA 72 bp AGTGTCATGGTGTCCACTGCAGGACACCTGAATGTGTaGAATACTCCGCAATCCTCAATTCACTGGCTTTAT +
Preference number: 6 (lower is better)
Translates to: SVMVSTAGHLNV*NTPQSSIHWLY
Trigger: ATAAAGCCAGTGAATTGAGGATTGCGGAGTATTGCACACATTCAGGTGTCCTGCAGTGGACACCATGACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441293.2
ENST00000582659.5
CDS CCA 72 bp ATCTCACATCTGCTGCAGTCATTACAATTTAGGGTGTaGGGAGGAACTTGGCTAGCAAGCTTGAGAGAACAG +
Preference number: 6 (lower is better)
Translates to: ISHLLQSLQFRV*GGTWLASLREQ
Trigger: CTGTTCTCTCAAGCTTGCTAGCCAAGTTCCTCCCCACACCCTAAATTGTAATGACTGCAGCAGATGTGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584150.5