RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000063245

Ensembl transcript IDs: ENST00000085079.11, ENST00000270460.11, ENST00000411543.6, ENST00000586194.1, ENST00000587937.1, ENST00000589704.1, ENST00000591743.1

Found 770 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCACAAGCGCGCACGGGATCCCAGCGTCTTCCCACAACCCCGCCTaGGGCTCCGTCCGCTCTCCGGCGCCCTCTGCTGGGCCAGCAGCC +
Preference number: 1 (lower is better)
Translates to: STSAHGIPASSHNPA*GSVRSPAPSAGPAA
Trigger: GGCTGCTGGCCCAGCAGAGGGCGCCGGAGAGCGGACGGAGCCGCAGGCGGGGTTGTGGGAAGACGCTGGGATCCCGTGCGCGCTTGTGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp CCACAACCCCGCCTGCGGCTCCGTCCGCTCTCCGGCGCCCTCTGCTaGGCCAGCAGCCGAAACGCAGGGGAGCGCTTTCCAGCTTCCTCC +
Preference number: 1 (lower is better)
Translates to: PQPRLRLRPLSGALC*ASSRNAGERFPASS
Trigger: GGAGGAAGCTGGAAAGCGCTCCCCTGCGTTTCGGCTGCTGGCCCAGCAGAGGGCGCCGGAGAGCGGACGGAGCCGCAGGCGGGGTTGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 90 bp TTCCCACAACCCCGCCTGCGGCTCCGTCCGCTCTCCGGCGCCCTCTaGTGGGCCAGCAGCCGAAACGCAGGGGAGCGCTTTCCAGCTTCC +
Preference number: 1 (lower is better)
Translates to: FPQPRLRLRPLSGAL*WASSRNAGERFPAS
Trigger: GGAAGCTGGAAAGCGCTCCCCTGCGTTTCGGCTGCTGGCCCAGCAGAGGGCGCCGGAGAGCGGACGGAGCCGCAGGCGGGGTTGTGGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 90 bp GGGCGGGTGAGCAAGGGGCGCTGGAGAAAGAGCGTGGAGAGCACGTaGCGTCTAGTGTGCGCGCTGGGCTGGAAGGTGGGGACCAGGAGG +
Preference number: 1 (lower is better)
Translates to: GRVSKGRWRKSVEST*RLVCALGWKVGTRR
Trigger: CCTCCTGGTCCCCACCTTCCAGCCCAGCGCGCACACTAGACGGCACGTGCTCTCCACGCTCTTTCTCCAGCGCCCCTTGCTCACCCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp CTCCTGCACCGGAAGCGTCTGGCCATGAGTGGCCTCCCGACCACCTaGACCTGTGTGGGCTACAGCTCCGCCAGGCCTCGCACAGTCCAC +
Preference number: 1 (lower is better)
Translates to: LLHRKRLAMSGLPTT*TCVGYSSARPRTVH
Trigger: GTGGACTGTGCGAGGCCTGGCGGAGCTGTAGCCCACACAGGTCCAGGTGGTCGGGAGGCCACTCATGGCCAGACGCTTCCGGTGCAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp GGTGGCCACGACGCTGCTCGGACACCGCAGTCATGTCCCTCTCAGTaGCCTCCAACACTCCACTGGCTGGGTGCTCCCTGGACCCCGACC +
Preference number: 1 (lower is better)
Translates to: GGHDAARTPQSCPSQ*PPTLHWLGAPWTPT
Trigger: GGTCGGGGTCCAGGGAGCACCCAGCCAGTGGAGTGTTGGAGGCCACTGAGAGGGACATGACTGCGGTGTCCGAGCAGCGTCGTGGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 90 bp CACACCACCCTGGCCGTCTGGAGCTTGTCCCAGCCCGGCTCCCCGTaGCATCGGGACCTGGCCACTCCTGGACGTGATGCCCTAAGCTTG +
Preference number: 1 (lower is better)
Translates to: HTTLAVWSLSQPGSP*HRDLATPGRDALSL
Trigger: CAAGCTTAGGGCATCACGTCCAGGAGTGGCCAGGTCCCGATGTCACGGGGAGCCGGGCTGGGACAAGCTCCAGACGGCCAGGGTGGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 90 bp AAGGGGCGCTGGAGAAAGAGCGTGGAGAGCACGTGCCGTCTAGTGTaGGCGCTGGGCTGGAAGGTGGGGACCAGGAGGAGACCGGGACCA +
Preference number: 1 (lower is better)
Translates to: KGRWRKSVESTCRLV*ALGWKVGTRRRPGP
Trigger: TGGTCCCGGTCTCCTCCTGGTCCCCACCTTCCAGCCCAGCGCGCACACTAGACGGCACGTGCTCTCCACGCTCTTTCTCCAGCGCCCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 90 bp TGGTGGGCCTGGACTCTGGTGGGCGGGGTGACCCAGGAGCTCGGATaGAGCTCCTACGGGCTCCAGGAAGGTTCCCTCAAGTGCCTTCCC +
Preference number: 1 (lower is better)
Translates to: WWAWTLVGGVTQELG*SSYGLQEGSLKCLP
Trigger: GGGAAGGCACTTGAGGGAACCTTCCTGGAGCCCGTAGGAGCTTCATCCGAGCTCCTGGGTCACCCCGCCCACCAGAGTCCAGGCCCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 90 bp GTCCACTCAGCTCAGCCGGCAGAGGCTGACCCGGCTTTCCAGGAGTaGAGGGATGGATTAGTGATGCTTGCGGTGGGCCCGGGCGATGGC +
Preference number: 1 (lower is better)
Translates to: VHSAQPAEADPAFQE*RDGLVMLAVGPGDG
Trigger: GCCATCGCCCGGGCCCACCGCAAGCATCACTAATCCATCCCTGCACTCCTGGAAAGCCGGGTCAGCCTCTGCCGGCTGAGCTGAGTGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 90 bp CCAGCCCGGCTCCCCGTGACATCGGGACCTGGCCACTCCTGGACGTaGTGCCCTAAGCTTGCCTCCCCTGCGGATGGATGTAGTGATGCT +
Preference number: 1 (lower is better)
Translates to: PARLPVTSGPGHSWT*CPKLASPADGCSDA
Trigger: AGCATCACTACATCCATCCGCAGGGGAGGCAAGCTTAGGGCATCACGTCCAGGAGTGGCCAGGTCCCGATGTCACGGGGAGCCGGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp GGACAGAAACACACGTGGCCACACACACGCCCTCCCCTCCATTTATaGCTGGCCCAGAGCTGCCCAGCCAGAGAGAGACCACGCAGGGCC +
Preference number: 1 (lower is better)
Translates to: GQKHTWPHTRPPLHL*LAQSCPARERPRRA
Trigger: GGCCCTGCGTGGTCTCTCTCTGGCTGGGCAGCTCTGGGCCAGCCATAAATGGAGGGGAGGGCGTGTGTGTGGCCACGTGTGTTTCTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 90 bp CCAAGATTGGCAAGAGGGAGGCTCGGCTCGCCTCCCCTTTCCATGTaGTCCCACCCAGAGCTGCCGCCTTCAGCTGGCTCTCTGTGCCCT +
Preference number: 1 (lower is better)
Translates to: PRLARGRLGSPPLSM*SHPELPPSAGSLCP
Trigger: AGGGCACAGAGAGCCAGCTGAAGGCGGCAGCTCTGGGTGGGATCACATGGAAAGGGGAGGCGAGCCGAGCCTCCCTCTTGCCAATCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 90 bp AACCAGGAGGCGCCTGGTGGTCCACTCAGCTCAGCCGGCAGAGGCTaGCCCGGCTTTCCAGGAGTGCAGGGATGGATTAGTGATGCTTGC +
Preference number: 1 (lower is better)
Translates to: NQEAPGGPLSSAGRG*PGFPGVQGWISDAC
Trigger: GCAAGCATCACTAATCCATCCCTGCACTCCTGGAAAGCCGGGTCAGCCTCTGCCGGCTGAGCTGAGTGGACCACCAGGCGCCTCCTGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 90 bp TCACGCCACACCCGGGAAGCTAGAAGCACGTGTGGGGGAGATGCCTaGGGCTGCAAGAAGGTGCCTGGGAATGGGCACAGAAACTCTCCC +
Preference number: 1 (lower is better)
Translates to: SRHTREARSTCGGDA*GCKKVPGNGHRNSP
Trigger: GGGAGAGTTTCTGTGCCCATTCCCAGGCACCTTCTTGCAGCCGCAGGCATCTCCCCCACACGTGCTTCTAGCTTCCCGGGTGTGGCGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp ACACAGAGGAAAACAGCACACAGAGGACAACCAGGAGGCGCCTGGTaGTCCACTCAGCTCAGCCGGCAGAGGCTGACCCGGCTTTCCAGG +
Preference number: 1 (lower is better)
Translates to: TQRKTAHRGQPGGAW*STQLSRQRLTRLSR
Trigger: CCTGGAAAGCCGGGTCAGCCTCTGCCGGCTGAGCTGAGTGGACCACCAGGCGCCTCCTGGTTGTCCTCTGTGTGCTGTTTTCCTCTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp AGCACACAGAGGAAAACAGCACACAGAGGACAACCAGGAGGCGCCTaGTGGTCCACTCAGCTCAGCCGGCAGAGGCTGACCCGGCTTTCC +
Preference number: 1 (lower is better)
Translates to: STQRKTAHRGQPGGA*WSTQLSRQRLTRLS
Trigger: GGAAAGCCGGGTCAGCCTCTGCCGGCTGAGCTGAGTGGACCACCAGGCGCCTCCTGGTTGTCCTCTGTGTGCTGTTTTCCTCTGTGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp CGGACACCGCAGTCATGTCCCTCTCAGTGGCCTCCAACACTCCACTaGCTGGGTGCTCCCTGGACCCCGACCCATAACAAGTGTCCCTGT +
Preference number: 1 (lower is better)
Translates to: RTPQSCPSQWPPTLH*LGAPWTPTHNKCPC
Trigger: ACAGGGACACTTGTTATGGGTCGGGGTCCAGGGAGCACCCAGCCAGTGGAGTGTTGGAGGCCACTGAGAGGGACATGACTGCGGTGTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp TTTGCTCTGCAATCCCCAGGTGACGTAGGTCTGTCCACCAGGGAGTaGGCACACAGGGTGGCCACGACGCTGCTCGGACACCGCAGTCAT +
Preference number: 1 (lower is better)
Translates to: FALQSPGDVGLSTRE*AHRVATTLLGHRSH
Trigger: ATGACTGCGGTGTCCGAGCAGCGTCGTGGCCACCCTGTGTGCCCACTCCCTGGTGGACAGACCTACGTCACCTGGGGATTGCAGAGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp CAGCAAAGGGAGCGATTTCTCGGCGGAAAGCATGCTGGAACCCTGTaGAAGCGTGGGCTGTCCCAGGACGTGCAGGCAGGCCTTAGACCC +
Preference number: 1 (lower is better)
Translates to: QQRERFLGGKHAGTL*KRGLSQDVQAGLRP
Trigger: GGGTCTAAGGCCTGCCTGCACGTCCTGGGACAGCCCACGCTTCCACAGGGTTCCAGCATGCTTTCCGCCGAGAAATCGCTCCCTTTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp AGAAACACACGTGGCCACACACACGCCCTCCCCTCCATTTATGGCTaGCCCAGAGCTGCCCAGCCAGAGAGAGACCACGCAGGGCCAAAG +
Preference number: 1 (lower is better)
Translates to: RNTRGHTHALPSIYG*PRAAQPERDHAGPK
Trigger: CTTTGGCCCTGCGTGGTCTCTCTCTGGCTGGGCAGCTCTGGGCCAGCCATAAATGGAGGGGAGGGCGTGTGTGTGGCCACGTGTGTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 90 bp AGAGCTGTCGGAGTCACTGAGGGAGCGAACCCAGCCGTCAGGACTTaGCCCCAGGGGATCACGGAGGGAGACTCCACATGGAAGAACAGC +
Preference number: 1 (lower is better)
Translates to: RAVGVTEGANPAVRT*PQGITEGDSTWKNS
Trigger: GCTGTTCTTCCATGTGGAGTCTCCCTCCGTGATCCCCTGGGGTCAAGTCCTGACGGCTGGGTTCGCTCCCTCAGTGACTCCGACAGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 90 bp CAATTCCTCCATCAAGCCCCCGACAACCCTCCAGACACCCTGGTCTaGAGGGGCAAGTGGAGGCCAGAGAACGCTCCGACACAGGTCATG +
Preference number: 1 (lower is better)
Translates to: QFLHQAPDNPPDTLV*RGKWRPENAPTQVM
Trigger: CATGACCTGTGTCGGAGCGTTCTCTGGCCTCCACTTGCCCCTGCAGACCAGGGTGTCTGGAGGGTTGTCGGGGGCTTGATGGAGGAATTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 90 bp CCGGCTGACCCCAAAGTTCCTGTGTCCCTGGGACCCACCTCTTCCTaGATGGTGTGGTCAGCAATTCCTCCATCAAGCCCCCGACAACCC +
Preference number: 1 (lower is better)
Translates to: PADPKVPVSLGPTSS*MVWSAIPPSSPRQP
Trigger: GGGTTGTCGGGGGCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGACACAGGAACTTTGGGGTCAGCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp CACCGCAGTCATGTCCCTCTCAGTGGCCTCCAACACTCCACTGGCTaGGTGCTCCCTGGACCCCGACCCATAACAAGTGTCCCTGTGATG +
Preference number: 1 (lower is better)
Translates to: HRSHVPLSGLQHSTG*VLPGPRPITSVPVM
Trigger: CATCACAGGGACACTTGTTATGGGTCGGGGTCCAGGGAGCACCCAGCCAGTGGAGTGTTGGAGGCCACTGAGAGGGACATGACTGCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp CACTTAGGCCCCTCCGGACAGTGTTGTCCAGGACAGAAACACACGTaGCCACACACACGCCCTCCCCTCCATTTATGGCTGGCCCAGAGC +
Preference number: 1 (lower is better)
Translates to: HLGPSGQCCPGQKHT*PHTRPPLHLWLAQS
Trigger: GCTCTGGGCCAGCCATAAATGGAGGGGAGGGCGTGTGTGTGGCCACGTGTGTTTCTGTCCTGGACAACACTGTCCGGAGGGGCCTAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 90 bp TTCCTCCTGGGAAATGACTCTCCCACAACATACCCAGGCCGGGTGTaGGAAGAGGGCTTCCCCTCCCTGGCTAAGCAAGGGGGATGCTCC +
Preference number: 1 (lower is better)
Translates to: FLLGNDSPTTYPGRV*EEGFPSLAKQGGCS
Trigger: GGAGCATCCCCCTTGCTTAGCCAGGGAGGGGAAGCCCTCTTCTCACACCCGGCCTGGGTATGTTGTGGGAGAGTCATTTCCCAGGAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp AGTAAGAGCCCGCGAGAGGTACGTGTGAGAGCGACTGTCTCCGTGTaGGCGAGAAGCCTGGAAACGGAGGAACTGGGTTTCCGAGGGACT +
Preference number: 1 (lower is better)
Translates to: SKSPREVRVRATVSV*ARSLETEELGFRGT
Trigger: AGTCCCTCGGAAACCCAGTTCCTCCGTTTCCAGGCTTCTCGCCCACACGGAGACAGTCGCTCTCACACGTACCTCTCGCGGGCTCTTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 90 bp GGATGGATTAGTGATGCTTGCGGTGGGCCCGGGCGATGGCGACGGTaGCCTGTGTTGCACATGTGCCATCTCTCAGGATTCTTCTCCTCC +
Preference number: 1 (lower is better)
Translates to: GWISDACGGPGRWRR*PVLHMCHLSGFFSS
Trigger: GGAGGAGAAGAATCCTGAGAGATGGCACATGTGCAACACAGGTCACCGTCGCCATCGCCCGGGCCCACCGCAAGCATCACTAATCCATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 90 bp GTGGGCGAGAAGCCTGGAAACGGAGGAACTGGGTTTCCGAGGGACTaGATACCTCGGTTGATAGTCTGCGCGCTGGCCCAGAAGGAAGGA +
Preference number: 1 (lower is better)
Translates to: VGEKPGNGGTGFPRD*IPRLIVCALAQKEG
Trigger: TCCTTCCTTCTGGGCCAGCGCGCAGACTATCAACCGAGGTATTCAGTCCCTCGGAAACCCAGTTCCTCCGTTTCCAGGCTTCTCGCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 90 bp GCACATCTGCTCCTGAGAGCCAGCCGGGAGCACCACCATGACTCTTaGTTAGCCAAACCTGAGGGATCTGAACCTCCTCCTAGGCCCATC +
Preference number: 1 (lower is better)
Translates to: AHLLLRASREHHHDS*LAKPEGSEPPPRPI
Trigger: GATGGGCCTAGGAGGAGGTTCAGATCCCTCAGGTTTGGCTAAGCAAGAGTCATGGTGGTGCTCCCGGCTGGCTCTCAGGAGCAGATGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp CCCAAAGTTCCTGTGTCCCTGGGACCCACCTCTTCCTGCATGGTGTaGTCAGCAATTCCTCCATCAAGCCCCCGACAACCCTCCAGACAC +
Preference number: 1 (lower is better)
Translates to: PKVPVSLGPTSSCMV*SAIPPSSPRQPSRH
Trigger: GTGTCTGGAGGGTTGTCGGGGGCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGACACAGGAACTTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp CTGACCCCAAAGTTCCTGTGTCCCTGGGACCCACCTCTTCCTGCATaGTGTGGTCAGCAATTCCTCCATCAAGCCCCCGACAACCCTCCA +
Preference number: 1 (lower is better)
Translates to: LTPKFLCPWDPPLPA*CGQQFLHQAPDNPP
Trigger: TGGAGGGTTGTCGGGGGCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGACACAGGAACTTTGGGGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp GAGCGACTGTCTCCGTGTGGGCGAGAAGCCTGGAAACGGAGGAACTaGGTTTCCGAGGGACTGAATACCTCGGTTGATAGTCTGCGCGCT +
Preference number: 1 (lower is better)
Translates to: ERLSPCGREAWKRRN*VSEGLNTSVDSLRA
Trigger: AGCGCGCAGACTATCAACCGAGGTATTCAGTCCCTCGGAAACCCAGTTCCTCCGTTTCCAGGCTTCTCGCCCACACGGAGACAGTCGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 90 bp CCAGCATTCTCCCAGCGTTCAACCGTGTATGTCACTAAGCTCAGGTaGTTGGGCCTCATGGGGGACTCCTACACAGCAGCTCCTGCTGAG +
Preference number: 1 (lower is better)
Translates to: PAFSQRSTVYVTKLR*LGLMGDSYTAAPAE
Trigger: CTCAGCAGGAGCTGCTGTGTAGGAGTCCCCCATGAGGCCCAAGCACCTGAGCTTAGTGACATACACGGTTGAACGCTGGGAGAATGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 90 bp CCATCTCTCAGGATTCTTCTCCTCCCTGAACCCCAGTGCACTCTCTaGCCTCATCCTGGTGTCCCCTCAACACAAGAGCAAGGCCTCCTG +
Preference number: 1 (lower is better)
Translates to: PSLRILLLPEPQCTL*PHPGVPSTQEQGLL
Trigger: CAGGAGGCCTTGCTCTTGTGTTGAGGGGACACCAGGATGAGGTCAGAGAGTGCACTGGGGTTCAGGGAGGAGAAGAATCCTGAGAGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 90 bp CCAACCACACACAACACACACACACACAGCAGCTATCTCCTTGGTTaGGGGCACTTCCCACTTAGGCCCCTCCGGACAGTGTTGTCCAGG +
Preference number: 1 (lower is better)
Translates to: PTTHNTHTHSSYLLG*GHFPLRPLRTVLSR
Trigger: CCTGGACAACACTGTCCGGAGGGGCCTAAGTGGGAAGTGCCCTCAACCAAGGAGATAGCTGCTGTGTGTGTGTGTGTTGTGTGTGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 90 bp CCCAGGCTGAGTGGCTTGAGTAGCACATTCACTGTGTGGCAGAACTaGGAGTCTGCCCAGGCTTTTCATTTCTTCTGGGCTCCCTGGTGC +
Preference number: 1 (lower is better)
Translates to: PRLSGLSSTFTVWQN*ESAQAFHFFWAPWC
Trigger: GCACCAGGGAGCCCAGAAGAAATGAAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCCACTCAGCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp GGGTCCCTGGATGAAGGGGCTCTGGGGGACACACGAAATCACAGATaGGAATCTGGGAGTGCCAAGCCCGTGGGAATTGCCATTTATTCC +
Preference number: 1 (lower is better)
Translates to: GSLDEGALGDTRNHR*ESGSAKPVGIAIYS
Trigger: GGAATAAATGGCAATTCCCACGGGCTTGGCACTCCCAGATTCCCATCTGTGATTTCGTGTGTCCCCCAGAGCCCCTTCATCCAGGGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp CATTCTCCCAGCGTTCAACCGTGTATGTCACTAAGCTCAGGTGCTTaGGCCTCATGGGGGACTCCTACACAGCAGCTCCTGCTGAGCACT +
Preference number: 1 (lower is better)
Translates to: HSPSVQPCMSLSSGA*ASWGTPTQQLLLST
Trigger: AGTGCTCAGCAGGAGCTGCTGTGTAGGAGTCCCCCATGAGGCCCAAGCACCTGAGCTTAGTGACATACACGGTTGAACGCTGGGAGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 90 bp GACCTGTGTTGCACATGTGCCATCTCTCAGGATTCTTCTCCTCCCTaGACCCCAGTGCACTCTCTGACCTCATCCTGGTGTCCCCTCAAC +
Preference number: 1 (lower is better)
Translates to: DLCCTCAISQDSSPP*TPVHSLTSSWCPLN
Trigger: GTTGAGGGGACACCAGGATGAGGTCAGAGAGTGCACTGGGGTTCAGGGAGGAGAAGAATCCTGAGAGATGGCACATGTGCAACACAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 90 bp ACATCTGATAGGCTTCTTCAGCCTCCACCATCCCCAGGTGACCTCTaGTCACCCTGGCCTGCCTTCAGCAAGAATCCTGCTAGGTGGGTT +
Preference number: 1 (lower is better)
Translates to: TSDRLLQPPPSPGDL*SPWPAFSKNPARWV
Trigger: AACCCACCTAGCAGGATTCTTGCTGAAGGCAGGCCAGGGTGATCAGAGGTCACCTGGGGATGGTGGAGGCTGAAGAAGCCTATCAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp CACAGTTCTGGAAACCAGAAATTCAAGATGAAGGTGCTGCAGGGTTaGCTTCCGCCAAGGCCTCTCTCCTTGGCTCCCAGACGGCTGTCT +
Preference number: 1 (lower is better)
Translates to: HSSGNQKFKMKVLQG*LPPRPLSLAPRRLS
Trigger: AGACAGCCGTCTGGGAGCCAAGGAGAGAGGCCTTGGCGGAAGCCAACCCTGCAGCACCTTCATCTTGAATTTCTGGTTTCCAGAACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp CCTCTGCAGCCCAGGCTGAGTGGCTTGAGTAGCACATTCACTGTGTaGCAGAACTGCGAGTCTGCCCAGGCTTTTCATTTCTTCTGGGCT +
Preference number: 1 (lower is better)
Translates to: PLQPRLSGLSSTFTV*QNCESAQAFHFFWA
Trigger: AGCCCAGAAGAAATGAAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCCACTCAGCCTGGGCTGCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 90 bp GTTTCTCACCACAGTGAAGGGCCTGGCAGGATGGCGCTTGAGGGATaGGCTGGACAACCCACAGTCATCACAGAGACAGACAAGTTCTCA +
Preference number: 1 (lower is better)
Translates to: VSHHSEGPGRMALEG*AGQPTVITETDKFS
Trigger: TGAGAACTTGTCTGTCTCTGTGATGACTGTGGGTTGTCCAGCTCATCCCTCAAGCGCCATCCTGCCAGGCCCTTCACTGTGGTGAGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp CAGAACTGCGAGTCTGCCCAGGCTTTTCATTTCTTCTGGGCTCCCTaGTGCCTCCCACGTGCATGTGTAGAACAGCATTCAGCCAGAGAT +
Preference number: 1 (lower is better)
Translates to: QNCESAQAFHFFWAP*CLPRACVEQHSARD
Trigger: ATCTCTGGCTGAATGCTGTTCTACACATGCACGTGGGAGGCACCAGGGAGCCCAGAAGAAATGAAAAGCCTGGGCAGACTCGCAGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 90 bp AGGGGCTCTGGGGGACACACGAAATCACAGATGGGAATCTGGGAGTaGCAAGCCCGTGGGAATTGCCATTTATTCCCAAAGTTGCCAAAA +
Preference number: 1 (lower is better)
Translates to: RGSGGHTKSQMGIWE*QARGNCHLFPKLPK
Trigger: TTTTGGCAACTTTGGGAATAAATGGCAATTCCCACGGGCTTGGCACTCCCAGATTCCCATCTGTGATTTCGTGTGTCCCCCAGAGCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 90 bp CAGGTGCTTGGGCCTCATGGGGGACTCCTACACAGCAGCTCCTGCTaGGCACTTTGGTGGCTGGAATATTCTAGAAAGAGGAATAAAGTA +
Preference number: 1 (lower is better)
Translates to: QVLGPHGGLLHSSSC*ALWWLEYSRKRNKV
Trigger: TACTTTATTCCTCTTTCTAGAATATTCCAGCCACCAAAGTGCTCAGCAGGAGCTGCTGTGTAGGAGTCCCCCATGAGGCCCAAGCACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp AACAGGGAGAAGTTCTCATTAATGTCAGCTCCTTCTGAGAACTGCTaGGGTCAGAATAGTCCGGGAAAGGGGAGAGGAGACACAAGGTCC +
Preference number: 1 (lower is better)
Translates to: NREKFSLMSAPSENC*GQNSPGKGRGDTRS
Trigger: GGACCTTGTGTCTCCTCTCCCCTTTCCCGGACTATTCTGACCCCAGCAGTTCTCAGAAGGAGCTGACATTAATGAGAACTTCTCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 90 bp ACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGATaGAGGTGCTGCAGGGTTGGCTTCCGCCAAGGCCTCTCTCCTTGG +
Preference number: 1 (lower is better)
Translates to: TSMDFLTVLETRNSR*RCCRVGFRQGLSPW
Trigger: CCAAGGAGAGAGGCCTTGGCGGAAGCCAACCCTGCAGCACCTTCATCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 90 bp TTCCAGTGGAAAGAAGAACCAAGGAGTTTGCCACGGCCATGTGGGTaGGAATCTTGTGTGTGGGCCTCATTTGATGCTCAGTCAAGATGG +
Preference number: 1 (lower is better)
Translates to: FQWKEEPRSLPRPCG*ESCVWASFDAQSRW
Trigger: CCATCTTGACTGAGCATCAAATGAGGCCCACACACAAGATTCTCACCCACATGGCCGTGGCAAACTCCTTGGTTCTTCTTTCCACTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 90 bp TCTAACAGGGAGAAGTTCTCATTAATGTCAGCTCCTTCTGAGAACTaGTGGGGTCAGAATAGTCCGGGAAAGGGGAGAGGAGACACAAGG +
Preference number: 1 (lower is better)
Translates to: SNREKFSLMSAPSEN*WGQNSPGKGRGDTR
Trigger: CCTTGTGTCTCCTCTCCCCTTTCCCGGACTATTCTGACCCCAGCAGTTCTCAGAAGGAGCTGACATTAATGAGAACTTCTCCCTGTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp CCAGCTGGGAGCGCTATAGAACGTCAATGGATTTTCTCACAGTTCTaGAAACCAGAAATTCAAGATGAAGGTGCTGCAGGGTTGGCTTCC +
Preference number: 1 (lower is better)
Translates to: PAGSAIERQWIFSQF*KPEIQDEGAAGLAS
Trigger: GGAAGCCAACCCTGCAGCACCTTCATCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCGCTCCCAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp TACGGATCACTTGCGATGCTTATTTCCCAGGGAACAGAAATGAAGTaGGGCCAGGCCATCTCCTGTCTCTGTTGTCTGTATTACAGAAGG +
Preference number: 1 (lower is better)
Translates to: YGSLAMLISQGTEMK*GQAISCLCCLYYRR
Trigger: CCTTCTGTAATACAGACAACAGAGACAGGAGATGGCCTGGCCCCACTTCATTTCTGTTCCCTGGGAAATAAGCATCGCAAGTGATCCGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 90 bp CATTCTACGGATCACTTGCGATGCTTATTTCCCAGGGAACAGAAATaGAGTGGGGCCAGGCCATCTCCTGTCTCTGTTGTCTGTATTACA +
Preference number: 1 (lower is better)
Translates to: HSTDHLRCLFPREQK*SGARPSPVSVVCIT
Trigger: TGTAATACAGACAACAGAGACAGGAGATGGCCTGGCCCCACTTCATTTCTGTTCCCTGGGAAATAAGCATCGCAAGTGATCCGTAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp ATAAAGTCTTCCTCACGGCCATTTAACAAGCTCGCCATCCCACTGTaGGGAGAGAGACACATCTGCTGTAGAAAGAGTGATACACACACA +
Preference number: 1 (lower is better)
Translates to: IKSSSRPFNKLAIPL*GERHICCRKSDTHT
Trigger: TGTGTGTGTATCACTCTTTCTACAGCAGATGTGTCTCTCTCCCCACAGTGGGATGGCGAGCTTGTTAAATGGCCGTGAGGAAGACTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp CCACAGCACCCAGGCGAAACAGTATCATTTCTAACCCTTTTCATGTaGCTGTCAGGACATGTTTCAAGCACCGAGTCCAGCATCTTGATA +
Preference number: 1 (lower is better)
Translates to: PQHPGETVSFLTLFM*LSGHVSSTESSILI
Trigger: TATCAAGATGCTGGACTCGGTGCTTGAAACATGTCCTGACAGCCACATGAAAAGGGTTAGAAATGATACTGTTTCGCCTGGGTGCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 90 bp AAGTGGATGAGAACAGCATTCAGCCAGAGATGCTTGGGAAGTGGATaGTGTCTACCATTCTACGGATCACTTGCGATGCTTATTTCCCAG +
Preference number: 1 (lower is better)
Translates to: KWMRTAFSQRCLGSG*CLPFYGSLAMLISQ
Trigger: CTGGGAAATAAGCATCGCAAGTGATCCGTAGAATGGTAGACATCATCCACTTCCCAAGCATCTCTGGCTGAATGCTGTTCTCATCCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 90 bp CATTGTTCTGAAAAGACATGGGGAGGGTTTCCAGGTGGTCTGAACTaGAGAGCTGGCTATGTCTGTGATGAGATCAGCACTCTTAGCTTT +
Preference number: 1 (lower is better)
Translates to: HCSEKTWGGFPGGLN*RAGYVCDEISTLSF
Trigger: AAAGCTAAGAGTGCTGATCTCATCACAGACATAGCCAGCTCTTCAGTTCAGACCACCTGGAAACCCTCCCCATGTCTTTTCAGAACAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp TGGGAAGTGGATGAGAACAGCATTCAGCCAGAGATGCTTGGGAAGTaGATGATGTCTACCATTCTACGGATCACTTGCGATGCTTATTTC +
Preference number: 1 (lower is better)
Translates to: WEVDENSIQPEMLGK*MMSTILRITCDAYF
Trigger: GAAATAAGCATCGCAAGTGATCCGTAGAATGGTAGACATCATCCACTTCCCAAGCATCTCTGGCTGAATGCTGTTCTCATCCACTTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp TTTGATGCTCAGTCAAGATGGGAAAGATATTATGGAAGAACAGAATaGCATTGGCCAGAGTCCCCACCCCAGTCTGCAAAGGAAAGATGG +
Preference number: 1 (lower is better)
Translates to: FDAQSRWERYYGRTE*HWPESPPQSAKERW
Trigger: CCATCTTTCCTTTGCAGACTGGGGTGGGGACTCTGGCCAATGCCATTCTGTTCTTCCATAATATCTTTCCCATCTTGACTGAGCATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 90 bp TTTGCCACGGCCATGTGGGTGAGAATCTTGTGTGTGGGCCTCATTTaGTGCTCAGTCAAGATGGGAAAGATATTATGGAAGAACAGAATG +
Preference number: 1 (lower is better)
Translates to: FATAMWVRILCVGLI*CSVKMGKILWKNRM
Trigger: CATTCTGTTCTTCCATAATATCTTTCCCATCTTGACTGAGCATCAAATGAGGCCCACACACAAGATTCTCACCCACATGGCCGTGGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp TGTCATAACAAAGTACCGCCAGCTGGGAGCGCTATAGAACGTCAATaGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGATGAAGGT +
Preference number: 1 (lower is better)
Translates to: CHNKVPPAGSAIERQ*IFSQFWKPEIQDEG
Trigger: ACCTTCATCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCGCTCCCAGCTGGCGGTACTTTGTTATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 90 bp CCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTaGGAGGCTGAATTTTCTATAATCTTCAATGTAGAGTGCTCGCAC +
Preference number: 1 (lower is better)
Translates to: PTLGSLGTLLDSLDI*EAEFSIIFNVECSH
Trigger: GTGCGAGCACTCTACATTGAAGATTATAGAAAATTCAGCCTCCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 90 bp TGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGAGGCTaGATTTTCTATAATCTTCAATGTAGAGTGCTCGCACTTACTTGC +
Preference number: 1 (lower is better)
Translates to: WISWHTPGFFGYLGG*IFYNLQCRVLALTC
Trigger: GCAAGTAAGTGCGAGCACTCTACATTGAAGATTATAGAAAATTCAGCCTCCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 90 bp GGTTGTAAATGGAAGAGGCTGAATATTGGTAATTGTAGAAGTTGGTaGTGGGTACATGAATTCATTATATTAGTGTCTCTGAGAAAAGCT +
Preference number: 1 (lower is better)
Translates to: GCKWKRLNIGNCRSW*WVHEFIILVSLRKA
Trigger: AGCTTTTCTCAGAGACACTAATATAATGAATTCATGTACCCATCACCAACTTCTACAATTACCAATATTCAGCCTCTTCCATTTACAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp GAGGGCGGGAGTAGAGCGAGGGGTAAGGCTAGGGTGAGCACAGGTGGCAGGGGACCCTGGGTCCCTGGATaGAGGGGCTCTGGGGGACAC +
Preference number: 2 (lower is better)
Translates to: EGGSRARGKARVSTGGRGPWVPG*RGSGGH
Trigger: GTGTCCCCCAGAGCCCCTTCATCCAGGGACCCAGGG...TCCCCTGCCACCTGTGCTCACCCTAGCCTTACCCCTCGCTCTACTCCCGCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp CCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCGAAGAGGGTGTAGTGTaGGTGGGCCCCAGGAAGGGG +
Preference number: 2 (lower is better)
Translates to: PRIHRGCVSGCVRGTRRLEEGVV*VGPRKG
Trigger: CCCCTTCCTGGGGCCCACTCACACTACACCCTCTTC...GAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
3UTR-3UTR TCA 90 bp CTCAATCGGGGACAACAGCAGGCTCCCAGCATTCTCCCAGCGTTCAACCGTGTATGTCTGGCCCCACCCTaGGCCCAGAGCGTCCCCCGG +
Preference number: 2 (lower is better)
Translates to: LNRGQQQAPSILPAFNRVCLAPP*AQSVPR
Trigger: CCGGGGGACGCTCTGGGCTCAGGGTGGGGCCAGACA...TACACGGTTGAACGCTGGGAGAATGCTGGGAGCCTGCTGTTGTCCCCGATTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGAATGGGGCAGCCGGATaGAGCCAGGCCCCCTTCCGC +
Preference number: 2 (lower is better)
Translates to: IITKDSPRVRERVREGNENGAAG*SQAPFR
Trigger: GCGGAAGGGGGCCTGGCTCCATCCGGCTGCCCCATT...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
3UTR-3UTR CCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGCCCAGGGAGCCGGAATaGGGCAGCCGGATGGAGCCA +
Preference number: 2 (lower is better)
Translates to: AKIITKDSPRVRERVREGPREPE*GSRMEP
Trigger: TGGCTCCATCCGGCTGCCCCATTCCGGCTCCCTGGG...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
3UTR-3UTR CCA 90 bp CTCAATCGGGGACAACAGCAGGCTCCCAGCATTCTCCCAGCGTTCAACCGTGTACCAGGAGGCGCCTGGTaGTCCACTCAGCTCAGCCGG +
Preference number: 2 (lower is better)
Translates to: LNRGQQQAPSILPAFNRVPGGAW*STQLSR
Trigger: CCGGCTGAGCTGAGTGGACCACCAGGCGCCTCCTGG...TACACGGTTGAACGCTGGGAGAATGCTGGGAGCCTGCTGTTGTCCCCGATTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp GAGGGCGGGAGTAGAGCGAGGGGTAAGGCTAGGGTGAGCACAGGTGGCAGGGGATCATGTCCCTCTCAGTaGCCTCCAACACTCCACTGG +
Preference number: 2 (lower is better)
Translates to: EGGSRARGKARVSTGGRGSCPSQ*PPTLHW
Trigger: CCAGTGGAGTGTTGGAGGCCACTGAGAGGGACATGA...TCCCCTGCCACCTGTGCTCACCCTAGCCTTACCCCTCGCTCTACTCCCGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp GAGGGCGGGAGTAGAGCGAGGGGTAAGGCTAGGGTGAGCACAGGTGGCAGGGGAAAGTTCCTGTGTCCCTaGGACCCACCTCTTCCTGCA +
Preference number: 2 (lower is better)
Translates to: EGGSRARGKARVSTGGRGKFLCP*DPPLPA
Trigger: TGCAGGAAGAGGTGGGTCCCAGGGACACAGGAACTT...TCCCCTGCCACCTGTGCTCACCCTAGCCTTACCCCTCGCTCTACTCCCGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp GAGAGCGACTGTCTCCGTGTGGGCGAGAAGCCTGGAAACGGAGGAACTGGGTTTTCTGGCCGGACGCAATaGCTCACGCCACACCCGGGA +
Preference number: 2 (lower is better)
Translates to: ESDCLRVGEKPGNGGTGFSGRTQ*LTPHPG
Trigger: TCCCGGGTGTGGCGTGAGCCATTGCGTCCGGCCAGA...AAACCCAGTTCCTCCGTTTCCAGGCTTCTCGCCCACACGGAGACAGTCGCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp TCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGATGCACTCACAACACTaGTCTCCCAGGGAGCCGGAA +
Preference number: 2 (lower is better)
Translates to: SPRIHRGCVSGCVRGTRRMHSQH*SPREPE
Trigger: TTCCGGCTCCCTGGGAGATCAGTGTTGTGAGTGCAT...CCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
3UTR-3UTR CCA 90 bp TCCCTGGGACCCACCTCTTCCTGCATGGTGTGGTCAGCAATTCCTCCATCAAGCAGTGGGCACACAGGGTaGCCACGACGCTGCTCGGAC +
Preference number: 2 (lower is better)
Translates to: SLGPTSSCMVWSAIPPSSSGHTG*PRRCSD
Trigger: GTCCGAGCAGCGTCGTGGCCACCCTGTGTGCCCACT...GCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR GCA 90 bp TCCCTGGGACCCACCTCTTCCTGCATGGTGTGGTCAGCAATTCCTCCATCAAGCCCAGACACCCTGGTCTaGAGGGGCAAGTGGAGGCCA +
Preference number: 2 (lower is better)
Translates to: SLGPTSSCMVWSAIPPSSPDTLV*RGKWRP
Trigger: TGGCCTCCACTTGCCCCTGCAGACCAGGGTGTCTGG...GCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAAGGGCACTGGGGGTaGGGATCCCCCATTTCACAT +
Preference number: 2 (lower is better)
Translates to: IITKDSPRVRERVREGNEEGHWG*GSPISH
Trigger: ATGTGAAATGGGGGATCCCCACCCCCAGTGCCCTTC...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
3UTR-3UTR TCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGATGCACTCACAACACTaGTCTCCCAGGGAGCCGGAA +
Preference number: 2 (lower is better)
Translates to: AKIITKDSPRVRERVREGMHSQH*SPREPE
Trigger: TTCCGGCTCCCTGGGAGATCAGTGTTGTGAGTGCAT...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
3UTR-3UTR TCA 90 bp GGCTTGAGTAGCACATTCACTGTGTGGCAGAACTGCGAGTCTGCCCAGGCTTTTCCAGCCGTCAGGACTTaGCCCCAGGGGATCACGGAG +
Preference number: 2 (lower is better)
Translates to: GLSSTFTVWQNCESAQAFPAVRT*PQGITE
Trigger: CTCCGTGATCCCCTGGGGTCAAGTCCTGACGGCTGG...AAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp GTGCTCCAGGGGAGGGGCCATGAGGAGGCTGTAGGTGAAACAGGAGTGGTTCAATCTGCAATCCCCAGGTaGCGTAGGTCTGTCCACCAG +
Preference number: 2 (lower is better)
Translates to: VLQGRGHEEAVGETGVVQSAIPR*RRSVHQ
Trigger: CTGGTGGACAGACCTACGTCACCTGGGGATTGCAGA...TTGAACCACTCCTGTTTCACCTACAGCCTCCTCATGGCCCCTCCCCTGGAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp GGCTTGAGTAGCACATTCACTGTGTGGCAGAACTGCGAGTCTGCCCAGGCTTTTTACCCAGGCCGGGTGTaGGAAGAGGGCTTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: GLSSTFTVWQNCESAQAFYPGRV*EEGFPS
Trigger: GGAGGGGAAGCCCTCTTCTCACACCCGGCCTGGGTA...AAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp GGCTTGAGTAGCACATTCACTGTGTGGCAGAACTGCGAGTCTGCCCAGGCTTTTCTCTGGTGGGCGGGGTaGCCCAGGAGCTCGGATGAA +
Preference number: 2 (lower is better)
Translates to: GLSSTFTVWQNCESAQAFLWWAG*PRSSDE
Trigger: TTCATCCGAGCTCCTGGGTCACCCCGCCCACCAGAG...AAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR GCA 90 bp GGCTTGAGTAGCACATTCACTGTGTGGCAGAACTGCGAGTCTGCCCAGGCTTTTGGGTGGCCACGACGCTaGTCGGACACCGCAGTCATG +
Preference number: 2 (lower is better)
Translates to: GLSSTFTVWQNCESAQAFGWPRR*SDTAVM
Trigger: CATGACTGCGGTGTCCGAGCAGCGTCGTGGCCACCC...AAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR GCA 90 bp GGCTTGAGTAGCACATTCACTGTGTGGCAGAACTGCGAGTCTGCCCAGGCTTTTCCGGGAGGTGGAGGTTaGGGTGAGCCGAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: GLSSTFTVWQNCESAQAFPGGGG*GEPRSC
Trigger: GCACGATCTCGGCTCACCGCAACCTCCACCTCCCGG...AAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR GCA 90 bp GGCTTGAGTAGCACATTCACTGTGTGGCAGAACTGCGAGTCTGCCCAGGCTTTTGGCTGTCCCAGGACGTaGAGGCAGGCCTTAGACCCC +
Preference number: 2 (lower is better)
Translates to: GLSSTFTVWQNCESAQAFGCPRT*RQALDP
Trigger: GGGGTCTAAGGCCTGCCTGCACGTCCTGGGACAGCC...AAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CAA 90 bp GCATTCTCCCAGCGTTCAACCGTGTATGTCACTAAGCTCAGGTGCTaGGGCCTCATGGGGGACTCCTACACAGCAGCTCCTGCTGAGCAC +
Preference number: 2 (lower is better)
Translates to: AFSQRSTVYVTKLRC*GLMGDSYTAAPAEH
Trigger: GTGCTCAGCAGGAGCTGCTGTGTAGGAGTCCCCCATGAGGCCCAAGCACCTGAGCTTAGTGACATACACGGTTGAACGCTGGGAGAATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp GTGCTCCAGGGGAGGGGCCATGAGGAGGCTGTAGGTGAAACAGGAGTGGTTCAAGATTCTTCTCCTCCCTaGACCCCAGTGCACTCTCTG +
Preference number: 2 (lower is better)
Translates to: VLQGRGHEEAVGETGVVQDSSPP*TPVHSL
Trigger: CAGAGAGTGCACTGGGGTTCAGGGAGGAGAAGAATC...TTGAACCACTCCTGTTTCACCTACAGCCTCCTCATGGCCCCTCCCCTGGAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp GTGCTCCAGGGGAGGGGCCATGAGGAGGCTGTAGGTGAAACAGGAGTGGTTCAAGAATCTGGAACCGGCTaGCCCCAAAGTTCCTGTGTC +
Preference number: 2 (lower is better)
Translates to: VLQGRGHEEAVGETGVVQESGTG*PQSSCV
Trigger: GACACAGGAACTTTGGGGTCAGCCGGTTCCAGATTC...TTGAACCACTCCTGTTTCACCTACAGCCTCCTCATGGCCCCTCCCCTGGAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR GCA 90 bp AAGGTGCCTGGGAATGGGCACAGAAACTCTCCCTCCCCTTTTAGCACACGCAGATGGATTAGTGATGCTTaGGGTGGGCCCGGGCGATGG +
Preference number: 2 (lower is better)
Translates to: KVPGNGHRNSPSPFSTRRWISDA*GGPGRW
Trigger: CCATCGCCCGGGCCCACCGCAAGCATCACTAATCCA...TCTGCGTGTGCTAAAAGGGGAGGGAGAGTTTCTGTGCCCATTCCCAGGCACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR GCA 90 bp ACGCAGAAAACCAACGCAGAGCAGCACAAACTAAGGGCCTGGGGGAGGCGGGAGGGACCCACCTCTTCCTaGATGGTGTGGTCAGCAATT +
Preference number: 2 (lower is better)
Translates to: TQKTNAEQHKLRAWGRREGPTSS*MVWSAI
Trigger: AATTGCTGACCACACCATGCAGGAAGAGGTGGGTCC...CTCCCGCCTCCCCCAGGCCCTTAGTTTGTGCTGCTCTGCGTTGGTTTTCTGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR GCA 90 bp AAGGTGCCTGGGAATGGGCACAGAAACTCTCCCTCCCCTTTTAGCACACGCAGAAGCGTAAGGGACGCTTaGTGCTGCCTGGGGACAGCA +
Preference number: 2 (lower is better)
Translates to: KVPGNGHRNSPSPFSTRRSVRDA*CCLGTA
Trigger: TGCTGTCCCCAGGCAGCAGCAAGCGTCCCTTACGCT...TCTGCGTGTGCTAAAAGGGGAGGGAGAGTTTCTGTGCCCATTCCCAGGCACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR GCA 90 bp ATGCTTGGGAAGTGGATGAGAACAGCATTCAGCCAGAGATGCTTGGGAAGTGGACCGGGAGGCGGAGGTTaGAGTGAGCCGAGATCGCGC +
Preference number: 2 (lower is better)
Translates to: MLGKWMRTAFSQRCLGSGPGGGG*SEPRSR
Trigger: GCGCGATCTCGGCTCACTGCAACCTCCGCCTCCCGG...TCCACTTCCCAAGCATCTCTGGCTGAATGCTGTTCTCATCCACTTCCCAAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR GCA 90 bp GGCTTGAGTAGCACATTCACTGTGTGGCAGAACTGCGAGTCTGCCCAGGCTTTTCGTGGGGGAGATGCCTaGAGCTGCACGAAGGTGCCT +
Preference number: 2 (lower is better)
Translates to: GLSSTFTVWQNCESAQAFRGGDA*SCTKVP
Trigger: AGGCACCTTCGTGCAGCTGCAGGCATCTCCCCCACG...AAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR GCA 90 bp GGCTTGAGTAGCACATTCACTGTGTGGCAGAACTGCGAGTCTGCCCAGGCTTTTTGGCTGGCCCAGAGCTaGCCAGCCAGAGAGAGACCA +
Preference number: 2 (lower is better)
Translates to: GLSSTFTVWQNCESAQAFWLAQS*PARERP
Trigger: TGGTCTCTCTCTGGCTGGGCAGCTCTGGGCCAGCCA...AAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp ATGCTTGGGAAGTGGATGAGAACAGCATTCAGCCAGAGATGCTTGGGAAGTGGACCCAGGGAGCCGGAATaGGGCAGCCGGATGGAGCCA +
Preference number: 2 (lower is better)
Translates to: MLGKWMRTAFSQRCLGSGPREPE*GSRMEP
Trigger: TGGCTCCATCCGGCTGCCCCATTCCGGCTCCCTGGG...TCCACTTCCCAAGCATCTCTGGCTGAATGCTGTTCTCATCCACTTCCCAAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp GGCTTGAGTAGCACATTCACTGTGTGGCAGAACTGCGAGTCTGCCCAGGCTTTTCTGAGGCCCTGGCTGTaGGGCCTGCAACAAGCTGTC +
Preference number: 2 (lower is better)
Translates to: GLSSTFTVWQNCESAQAFLRPWL*GLQQAV
Trigger: GACAGCTTGTTGCAGGCCCCACAGCCAGGGCCTCAG...AAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp GGCTTGAGTAGCACATTCACTGTGTGGCAGAACTGCGAGTCTGCCCAGGCTTTTCAACACTCCACTGGCTaGGTGCTCCCTGGACCCCGA +
Preference number: 2 (lower is better)
Translates to: GLSSTFTVWQNCESAQAFQHSTG*VLPGPR
Trigger: TCGGGGTCCAGGGAGCACCCAGCCAGTGGAGTGTTG...AAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp CTCAATCGGGGACAACAGCAGGCTCCCAGCATTCTCCCAGCGTTCAACCGTGTACTAAGCTCAGGTGCTTaGGCCTCATGGGGGACTCCT +
Preference number: 2 (lower is better)
Translates to: LNRGQQQAPSILPAFNRVLSSGA*ASWGTP
Trigger: AGGAGTCCCCCATGAGGCCCAAGCACCTGAGCTTAG...TACACGGTTGAACGCTGGGAGAATGCTGGGAGCCTGCTGTTGTCCCCGATTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp CTCAATCGGGGACAACAGCAGGCTCCCAGCATTCTCCCAGCGTTCAACCGTGTAAGGAGGCTCAAACACTaGCTGGGGGTTGGGAGTTTG +
Preference number: 2 (lower is better)
Translates to: LNRGQQQAPSILPAFNRVRRLKH*LGVGSL
Trigger: CAAACTCCCAACCCCCAGTCAGTGTTTGAGCCTCCT...TACACGGTTGAACGCTGGGAGAATGCTGGGAGCCTGCTGTTGTCCCCGATTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp GGCTTGAGTAGCACATTCACTGTGTGGCAGAACTGCGAGTCTGCCCAGGCTTTTGGTGAATGGAGGGTCTaGCAAGTGAGGGGCCCAGGA +
Preference number: 2 (lower is better)
Translates to: GLSSTFTVWQNCESAQAFGEWRV*QVRGPG
Trigger: TCCTGGGCCCCTCACTTGTCAGACCCTCCATTCACC...AAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp ATGCTTGGGAAGTGGATGAGAACAGCATTCAGCCAGAGATGCTTGGGAAGTGGAGGGGTAAGGCTAGGGTaGGCACAGGTGGCAGGGGAC +
Preference number: 2 (lower is better)
Translates to: MLGKWMRTAFSQRCLGSGGVRLG*AQVAGD
Trigger: GTCCCCTGCCACCTGTGCTCACCCTAGCCTTACCCC...TCCACTTCCCAAGCATCTCTGGCTGAATGCTGTTCTCATCCACTTCCCAAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTCTGGTCTCGAACTCCTaGCCTCGTGATCCGCCCGCC +
Preference number: 2 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLLVSNS*PRDPPA
Trigger: GGCGGGCGGATCACGAGGTCAGGAGTTCGAGACCAG...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGAATGGGGCAGCCGGATaGAGCCAGGCCCCCTTCCGC +
Preference number: 2 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGNGAAG*SQAPFR
Trigger: GCGGAAGGGGGCCTGGCTCCATCCGGCTGCCCCATT...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp GTGCTCCAGGGGAGGGGCCATGAGGAGGCTGTAGGTGAAACAGGAGTGGTTCAATGGATGAAGGGGCTCTaGGGGACACACGAAATCACA +
Preference number: 2 (lower is better)
Translates to: VLQGRGHEEAVGETGVVQWMKGL*GTHEIT
Trigger: TGTGATTTCGTGTGTCCCCCAGAGCCCCTTCATCCA...TTGAACCACTCCTGTTTCACCTACAGCCTCCTCATGGCCCCTCCCCTGGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTCTGAGACAGAGGGGCTaGTTGCCAGCCACCCCCGAG +
Preference number: 2 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLLRQRG*LPATPE
Trigger: CTCGGGGGTGGCTGGCAACCAGCCCCTCTGTCTCAG...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTGGCCTCCCGACCACCTaGACCTGTGTGGGCTACAGC +
Preference number: 2 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLGLPTT*TCVGYS
Trigger: GCTGTAGCCCACACAGGTCCAGGTGGTCGGGAGGCC...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp GTGCTCCAGGGGAGGGGCCATGAGGAGGCTGTAGGTGAAACAGGAGTGGTTCAACCACCTCTTCCTGCATaGTGTGGTCAGCAATTCCTC +
Preference number: 2 (lower is better)
Translates to: VLQGRGHEEAVGETGVVQPPLPA*CGQQFL
Trigger: GAGGAATTGCTGACCACACCATGCAGGAAGAGGTGG...TTGAACCACTCCTGTTTCACCTACAGCCTCCTCATGGCCCCTCCCCTGGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp GGCTTGAGTAGCACATTCACTGTGTGGCAGAACTGCGAGTCTGCCCAGGCTTTTCGGCGGAAAGCATGCTaGAACCCTGTGGAAGCGTGG +
Preference number: 2 (lower is better)
Translates to: GLSSTFTVWQNCESAQAFRRKAC*NPVEAW
Trigger: CCACGCTTCCACAGGGTTCCAGCATGCTTTCCGCCG...AAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CAA 90 bp TCACAGTTCTGGAAACCAGAAATTCAAGATGAAGGTGCTGCAGGGTaGGCTTCCGCCAAGGCCTCTCTCCTTGGCTCCCAGACGGCTGTC +
Preference number: 2 (lower is better)
Translates to: SQFWKPEIQDEGAAG*ASAKASLLGSQTAV
Trigger: GACAGCCGTCTGGGAGCCAAGGAGAGAGGCCTTGGCGGAAGCCAACCCTGCAGCACCTTCATCTTGAATTTCTGGTTTCCAGAACTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR GCA 90 bp TCCCTGGGACCCACCTCTTCCTGCATGGTGTGGTCAGCAATTCCTCCATCAAGCGACGGTGACCTGTGTTaGACATGTGCCATCTCTCAG +
Preference number: 2 (lower is better)
Translates to: SLGPTSSCMVWSAIPPSSDGDLC*TCAISQ
Trigger: CTGAGAGATGGCACATGTGCAACACAGGTCACCGTC...GCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR GCA 90 bp GTGCTCCAGGGGAGGGGCCATGAGGAGGCTGTAGGTGAAACAGGAGTGGTTCAAAGCCAATCCTTGGGCTaGAGTTTGAGAAACTCCAGG +
Preference number: 2 (lower is better)
Translates to: VLQGRGHEEAVGETGVVQSQSLG*SLRNSR
Trigger: CCTGGAGTTTCTCAAACTGCAGCCCAAGGATTGGCT...TTGAACCACTCCTGTTTCACCTACAGCCTCCTCATGGCCCCTCCCCTGGAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR GCA 90 bp ATGCTTGGGAAGTGGATGAGAACAGCATTCAGCCAGAGATGCTTGGGAAGTGGAAGCGCGTGGGGGAGATaGCTGCAGCTGCACGAAGGT +
Preference number: 2 (lower is better)
Translates to: MLGKWMRTAFSQRCLGSGSAWGR*LQLHEG
Trigger: ACCTTCGTGCAGCTGCAGGCATCTCCCCCACGCGCT...TCCACTTCCCAAGCATCTCTGGCTGAATGCTGTTCTCATCCACTTCCCAAGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTCCTCCAACACTCCACTaGCTGGGTGCTCCCTGGACC +
Preference number: 2 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLPPTLH*LGAPWT
Trigger: GGTCCAGGGAGCACCCAGCCAGTGGAGTGTTGGAGG...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp GGCTTGAGTAGCACATTCACTGTGTGGCAGAACTGCGAGTCTGCCCAGGCTTTTTGGGGAGACCAAGATTaGCAAGAGGGAGGCTCGGCT +
Preference number: 2 (lower is better)
Translates to: GLSSTFTVWQNCESAQAFWGDQD*QEGGSA
Trigger: AGCCGAGCCTCCCTCTTGCCAATCTTGGTCTCCCCA...AAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp AAGGTGCCTGGGAATGGGCACAGAAACTCTCCCTCCCCTTTTAGCACACGCAGAAAACCCCCGGACCCCTaGGGTTTGCTCTTAGTGATT +
Preference number: 2 (lower is better)
Translates to: KVPGNGHRNSPSPFSTRRKPPDP*GLLLVI
Trigger: AATCACTAAGAGCAAACCTCAGGGGTCCGGGGGTTT...TCTGCGTGTGCTAAAAGGGGAGGGAGAGTTTCTGTGCCCATTCCCAGGCACCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTAGGCCACTCCTGGACGTaGTGCCCTAAGCTTGCCTCC +
Preference number: 2 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILGHSWT*CPKLAS
Trigger: GGAGGCAAGCTTAGGGCATCACGTCCAGGAGTGGCC...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR GCA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGAGCGTGGAGAGCACGTaGCGTCTAGTGTGCGCGCTG +
Preference number: 2 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGSVEST*RLVCAL
Trigger: CAGCGCGCACACTAGACGGCACGTGCTCTCCACGCT...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTACAACCAGGAGGCGCCTaGTGGTCCACTCAGCTCAGC +
Preference number: 2 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILQPGGA*WSTQLS
Trigger: GCTGAGCTGAGTGGACCACCAGGCGCCTCCTGGTTG...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp GGCTTGAGTAGCACATTCACTGTGTGGCAGAACTGCGAGTCTGCCCAGGCTTTTGAGGGAGACTCCACATaGAAGAACAGCCTGTTCGGC +
Preference number: 2 (lower is better)
Translates to: GLSSTFTVWQNCESAQAFEGDST*KNSLFG
Trigger: GCCGAACAGGCTGTTCTTCCATGTGGAGTCTCCCTC...AAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTTGGCTGGGTGCTCCCTaGACCCCGACCCATAACAAG +
Preference number: 2 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLWLGAP*TPTHNK
Trigger: CTTGTTATGGGTCGGGGTCCAGGGAGCACCCAGCCA...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp ATGCTTGGGAAGTGGATGAGAACAGCATTCAGCCAGAGATGCTTGGGAAGTGGAGGTGCTTGGGCCTCATaGGGGACTCCTACACAGCAG +
Preference number: 2 (lower is better)
Translates to: MLGKWMRTAFSQRCLGSGGAWAS*GTPTQQ
Trigger: CTGCTGTGTAGGAGTCCCCCATGAGGCCCAAGCACC...TCCACTTCCCAAGCATCTCTGGCTGAATGCTGTTCTCATCCACTTCCCAAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTCACAGCAGCTCCTGCTaGGCACTTTGGTGGCTGGAA +
Preference number: 2 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLHSSSC*ALWWLE
Trigger: TTCCAGCCACCAAAGTGCTCAGCAGGAGCTGCTGTG...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTATGGCAGGATGGCGCTTaGGGGATGAGCTGGACAACC +
Preference number: 2 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILWQDGA*GMSWTT
Trigger: GGTTGTCCAGCTCATCCCTCAAGCGCCATCCTGCCA...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTAGGGGCACCTGTGATGTaGGTAGGCCGGTTTCTCACC +
Preference number: 2 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILGAPVM*VGRFLT
Trigger: GGTGAGAAACCGGCCTACTCACATCACAGGTGCCCC...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGGGCAGGAGAATGGCGTaGACACAGGAGGCGGAGCTT +
Preference number: 2 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGGRRMA*TQEAEL
Trigger: AAGCTCCGCCTCCTGTGTTCACGCCATTCTCCTGCC...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGTCACCCCAGCACCTCTaGGACAAGAGCTGTCGGAGT +
Preference number: 2 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGSPQHL*DKSCRS
Trigger: ACTCCGACAGCTCTTGTCTCAGAGGTGCTGGGGTGA...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR GCA 90 bp TTCATGTGGCTGTCAGGACATGTTTCAAGCACCGAGTCCAGCATCTTGATAAGAAAGAGCAAGGCCTCCTaGACCGGAAGCGTCTGGCCA +
Preference number: 2 (lower is better)
Translates to: FMWLSGHVSSTESSILIRKSKAS*TGSVWP
Trigger: TGGCCAGACGCTTCCGGTGCAGGAGGCCTTGCTCTT...TCTTATCAAGATGCTGGACTCGGTGCTTGAAACATGTCCTGACAGCCACATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR GCA 90 bp GTGCTCCAGGGGAGGGGCCATGAGGAGGCTGTAGGTGAAACAGGAGTGGTTCAAGGAGAGAGACACATCTaGTGTAGAAAGAGTGATACA +
Preference number: 2 (lower is better)
Translates to: VLQGRGHEEAVGETGVVQGERHI*CRKSDT
Trigger: TGTATCACTCTTTCTACAGCAGATGTGTCTCTCTCC...TTGAACCACTCCTGTTTCACCTACAGCCTCCTCATGGCCCCTCCCCTGGAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR GCA 90 bp TTCATGTGGCTGTCAGGACATGTTTCAAGCACCGAGTCCAGCATCTTGATAAGATGTGGGGGAGATGCCTaGGGCTGCAAGAAGGTGCCT +
Preference number: 2 (lower is better)
Translates to: FMWLSGHVSSTESSILIRCGGDA*GCKKVP
Trigger: AGGCACCTTCTTGCAGCCGCAGGCATCTCCCCCACA...TCTTATCAAGATGCTGGACTCGGTGCTTGAAACATGTCCTGACAGCCACATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTAGCCATCCCTTGACCTaGGAGGGTCAGGGAAATCAG +
Preference number: 2 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLSHPLT*EGQGNQ
Trigger: CTGATTTCCCTGACCCTCCCAGGTCAAGGGATGGCT...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp GTGCTCCAGGGGAGGGGCCATGAGGAGGCTGTAGGTGAAACAGGAGTGGTTCAAGAGCACTTTGGTGGCTaGAATATTCTAGAAAGAGGA +
Preference number: 2 (lower is better)
Translates to: VLQGRGHEEAVGETGVVQEHFGG*NILERG
Trigger: TCCTCTTTCTAGAATATTCCAGCCACCAAAGTGCTC...TTGAACCACTCCTGTTTCACCTACAGCCTCCTCATGGCCCCTCCCCTGGAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGGTGATACACACACAGTaGGGGGAGCCCTCAATCGGG +
Preference number: 2 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGVIHTQ*GEPSIG
Trigger: CCCGATTGAGGGCTCCCCCCACTGTGTGTGTATCAC...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTATTTGGAAGGCCGAGGTaGGCAGATCACGAGGTCAGG +
Preference number: 2 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILFGRPR*ADHEVR
Trigger: CCTGACCTCGTGATCTGCCCACCTCGGCCTTCCAAA...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp TTCATGTGGCTGTCAGGACATGTTTCAAGCACCGAGTCCAGCATCTTGATAAGAGGAAATCAGGGCTTCTaGGACAGAGGGGCTGGTTGC +
Preference number: 2 (lower is better)
Translates to: FMWLSGHVSSTESSILIRGNQGF*DRGAGC
Trigger: GCAACCAGCCCCTCTGTCTCAGAAGCCCTGATTTCC...TCTTATCAAGATGCTGGACTCGGTGCTTGAAACATGTCCTGACAGCCACATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGCCTTTCATTCCCCTCTaGGCACGCAGGGTTAACTGC +
Preference number: 2 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGPFIPL*ARRVNC
Trigger: GCAGTTAACCCTGCGTGCTCAGAGGGGAATGAAAGG...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp GGCTTGAGTAGCACATTCACTGTGTGGCAGAACTGCGAGTCTGCCCAGGCTTTTCTTGATTTGGGTGGATaGGAACATTCCCCACAACAC +
Preference number: 2 (lower is better)
Translates to: GLSSTFTVWQNCESAQAFLDLGG*EHSPQH
Trigger: GTGTTGTGGGGAATGTTCTCATCCACCCAAATCAAG...AAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR GCA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTGGGACACTCGGTCTCTaGCACACTCAATGTCACCAT +
Preference number: 2 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLGTLGL*HTQCHH
Trigger: ATGGTGACATTGAGTGTGGCAGAGACCGAGTGTCCC...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTGGAGTGCCAAGCCCGTaGGAATTGCCATTTATTCCC +
Preference number: 2 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLGVPSP*ELPFIP
Trigger: GGGAATAAATGGCAATTCCCACGGGCTTGGCACTCC...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp GGCTTGAGTAGCACATTCACTGTGTGGCAGAACTGCGAGTCTGCCCAGGCTTTTTCTTCCTGCATGGTGTaGTCAGCAATTCCTCCATCA +
Preference number: 2 (lower is better)
Translates to: GLSSTFTVWQNCESAQAFSSCMV*SAIPPS
Trigger: TGATGGAGGAATTGCTGACCACACCATGCAGGAAGA...AAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTAGAAGGTGCCTGGGAATaGGCACAGAAACTCTCCCTC +
Preference number: 2 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILEGAWE*AQKLSL
Trigger: GAGGGAGAGTTTCTGTGCCCATTCCCAGGCACCTTC...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGATCCGGCGCCCTCTGCTaGGCCAGCAGCCGAAACGCA +
Preference number: 2 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRSGALC*ASSRNA
Trigger: TGCGTTTCGGCTGCTGGCCCAGCAGAGGGCGCCGGA...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGAAGGCGGAGGTTGCAGTaGGCCGAGATCGCGCCACTG +
Preference number: 2 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRRRRLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCGGCTCACTGCAACCTCCGCCT...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp ATGCTTGGGAAGTGGATGAGAACAGCATTCAGCCAGAGATGCTTGGGAAGTGGAACCAGAAATTCAAGATaGAGGTGCTGCAGGGTTGGC +
Preference number: 2 (lower is better)
Translates to: MLGKWMRTAFSQRCLGSGTRNSR*RCCRVG
Trigger: GCCAACCCTGCAGCACCTTCATCTTGAATTTCTGGT...TCCACTTCCCAAGCATCTCTGGCTGAATGCTGTTCTCATCCACTTCCCAAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGACCACCTGGACCTGTGTaGGCTACAGCTCCGCCAGGC +
Preference number: 2 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRPPGPV*ATAPPG
Trigger: GCCTGGCGGAGCTGTAGCCCACACAGGTCCAGGTGG...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGTCCCATGGTGAGCTATaGTCACACACTGCAATGCAG +
Preference number: 2 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGSHGEL*SHTAMQ
Trigger: CTGCATTGCAGTGTGTGATCATAGCTCACCATGGGA...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR GCA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGGCTAAGCAAGGGGGATaGTCCTCTGCAACTGAATCT +
Preference number: 2 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGAKQGG*SSATES
Trigger: AGATTCAGTTGCAGAGGAGCATCCCCCTTGCTTAGC...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR GCA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGCACAAACGAAGGGCCTaGCTGCAGGATCAAAGAATG +
Preference number: 2 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGHKRRA*LQDQRM
Trigger: CATTCTTTGATCCTGCAGGCAGGCCCTTCGTTTGTG...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR GCA 90 bp ATGCTTGGGAAGTGGATGAGAACAGCATTCAGCCAGAGATGCTTGGGAAGTGGAACGGATCACTTGCGATaGTTATTTCCCAGGGAACAG +
Preference number: 2 (lower is better)
Translates to: MLGKWMRTAFSQRCLGSGTDHLR*LFPREQ
Trigger: CTGTTCCCTGGGAAATAAGCATCGCAAGTGATCCGT...TCCACTTCCCAAGCATCTCTGGCTGAATGCTGTTCTCATCCACTTCCCAAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp ATGCTTGGGAAGTGGATGAGAACAGCATTCAGCCAGAGATGCTTGGGAAGTGGAACACGAAATCACAGATaGGAATCTGGGAGTGCCAAG +
Preference number: 2 (lower is better)
Translates to: MLGKWMRTAFSQRCLGSGTRNHR*ESGSAK
Trigger: CTTGGCACTCCCAGATTCCCATCTGTGATTTCGTGT...TCCACTTCCCAAGCATCTCTGGCTGAATGCTGTTCTCATCCACTTCCCAAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGACCCGAGAAAGAGATGTaGCCTGAGCCCTGGGTCCCT +
Preference number: 2 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRPEKEM*PEPWVP
Trigger: AGGGACCCAGGGCTCAGGTCACATCTCTTTCTCGGG...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGGCCACAATGTCAGTATaGCTGTTGAAGAACCTGACC +
Preference number: 2 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGATMSV*LLKNLT
Trigger: GGTCAGGTTCTTCAACAGTCATACTGACATTGTGGC...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGAAATCCTTTCAGCAAATaGACCCCGCCGCCATCCCCC +
Preference number: 2 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRNPFSK*TPPPSP
Trigger: GGGGGATGGCGGCGGGGTTCATTTGCTGAAAGGATT...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGAAGGCGGAGGTTGCAGTaGGCCAAGATGACACCACTG +
Preference number: 2 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRRRRLQ*AKMTPL
Trigger: CAGTGGTGTCATCTTGGCTCACTGCAACCTCCGCCT...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR GCA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGAACAGGAGGCGGAGCTTaGAGTGAGCAGAGATCGAGC +
Preference number: 2 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRTGGGA*SEQRSS
Trigger: GCTCGATCTCTGCTCACTGCAAGCTCCGCCTCCTGT...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR GCA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTTGCCTATTAAACTCCTaGTCCAAATCTCACTCTGTG +
Preference number: 2 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLCLLNS*SKSHSV
Trigger: CACAGAGTGAGATTTGGAGCAGGAGTTTAATAGGCA...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR GCA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGAAGCAGCTTAGAAATTaGTCCCTTTCTCACCACACC +
Preference number: 2 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGKQLRN*SLSHHT
Trigger: GGTGTGGTGAGAAAGGGAGCAATTTCTAAGCTGCTT...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGAATGCTCCTCTGCAACTaGATCTGGAACCGGCTGACC +
Preference number: 2 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRMLLCN*IWNRLT
Trigger: GGTCAGCCGGTTCCAGATTCAGTTGCAGAGGAGCAT...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR GCA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGACTGATCACCCTGGCCTaGCTTCAGCAAGAATCCTGC +
Preference number: 2 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRLITLA*LQQESC
Trigger: GCAGGATTCTTGCTGAAGGCAGGCCAGGGTGATCAG...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR GCA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGACTGAGGCACGAGAATTaGTTGAACCTGGGAGGCGGA +
Preference number: 2 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRLRHEN*LNLGGG
Trigger: TCCGCCTCCCAGGTTCAAGCAATTCTCGTGCCTCAG...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CCA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGAGAAGGTGCCTGGGAATaGGCACAGAAACACTCCCTC +
Preference number: 2 (lower is better)
Translates to: RYRTSMDFLTVLETRNSREGAWE*AQKHSL
Trigger: GAGGGAGTGTTTCTGTGCCCATTCCCAGGCACCTTC...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR TCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTATTATCCTTAATTTGGTaGATGGAGGGTCTGACAAGT +
Preference number: 2 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILLSLIW*MEGLTS
Trigger: ACTTGTCAGACCCTCCATTCACCAAATTAAGGATAA...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 72 bp CCCCGCCTGCGGCTCCGTCCGCTCTCCGGCGCCCTCTaGTGGGCCAGCAGCCGAAACGCAGGGGAGCGCTTT +
Preference number: 3 (lower is better)
Translates to: PRLRLRPLSGAL*WASSRNAGERF
Trigger: AAAGCGCTCCCCTGCGTTTCGGCTGCTGGCCCAGCAGAGGGCGCCGGAGAGCGGACGGAGCCGCAGGCGGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 72 bp CTGGCCGTCTGGAGCTTGTCCCAGCCCGGCTCCCCGTaGCATCGGGACCTGGCCACTCCTGGACGTGATGCC +
Preference number: 3 (lower is better)
Translates to: LAVWSLSQPGSP*HRDLATPGRDA
Trigger: GGCATCACGTCCAGGAGTGGCCAGGTCCCGATGTCACGGGGAGCCGGGCTGGGACAAGCTCCAGACGGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 72 bp GCTCGCCTCCCCTTTCCATGTGATCCCACCCAGAGCTaGCGCCTTCAGCTGGCTCTCTGTGCCCTGTGGGGC +
Preference number: 3 (lower is better)
Translates to: ARLPFPCDPTQS*RLQLALCALWG
Trigger: GCCCCACAGGGCACAGAGAGCCAGCTGAAGGCGGCAGCTCTGGGTGGGATCACATGGAAAGGGGAGGCGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 72 bp AGCAAGGGGCGCTGGAGAAAGAGCGTGGAGAGCACGTaGCGTCTAGTGTGCGCGCTGGGCTGGAAGGTGGGG +
Preference number: 3 (lower is better)
Translates to: SKGRWRKSVEST*RLVCALGWKVG
Trigger: CCCCACCTTCCAGCCCAGCGCGCACACTAGACGGCACGTGCTCTCCACGCTCTTTCTCCAGCGCCCCTTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 72 bp CTGGTTGCCAGCCACCCCCGAGAAAGAGATGTGACCTaGGCCCTGGGTCCCTGGATGAAGGGGCTCTGGGGG +
Preference number: 3 (lower is better)
Translates to: LVASHPRERDVT*ALGPWMKGLWG
Trigger: CCCCCAGAGCCCCTTCATCCAGGGACCCAGGGCTCAGGTCACATCTCTTTCTCGGGGGTGGCTGGCAACCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 72 bp CCGGGACCACGAGTAAGAGCCCGCGAGAGGTACGTGTaGGAGCGACTGTCTCCGTGTGGGCGAGAAGCCTGG +
Preference number: 3 (lower is better)
Translates to: PGPRVRARERYV*ERLSPCGREAW
Trigger: CCAGGCTTCTCGCCCACACGGAGACAGTCGCTCTCACACGTACCTCTCGCGGGCTCTTACTCGTGGTCCCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 72 bp GCTCAGCCGGCAGAGGCTGACCCGGCTTTCCAGGAGTaGAGGGATGGATTAGTGATGCTTGCGGTGGGCCCG +
Preference number: 3 (lower is better)
Translates to: AQPAEADPAFQE*RDGLVMLAVGP
Trigger: CGGGCCCACCGCAAGCATCACTAATCCATCCCTGCACTCCTGGAAAGCCGGGTCAGCCTCTGCCGGCTGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 72 bp GACGCTGCTCGGACACCGCAGTCATGTCCCTCTCAGTaGCCTCCAACACTCCACTGGCTGGGTGCTCCCTGG +
Preference number: 3 (lower is better)
Translates to: DAARTPQSCPSQ*PPTLHWLGAPW
Trigger: CCAGGGAGCACCCAGCCAGTGGAGTGTTGGAGGCCACTGAGAGGGACATGACTGCGGTGTCCGAGCAGCGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 72 bp GGAGTCACTGAGGGAGCGAACCCAGCCGTCAGGACTTaGCCCCAGGGGATCACGGAGGGAGACTCCACATGG +
Preference number: 3 (lower is better)
Translates to: GVTEGANPAVRT*PQGITEGDSTW
Trigger: CCATGTGGAGTCTCCCTCCGTGATCCCCTGGGGTCAAGTCCTGACGGCTGGGTTCGCTCCCTCAGTGACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 72 bp TGGACTCTGGTGGGCGGGGTGACCCAGGAGCTCGGATaGAGCTCCTACGGGCTCCAGGAAGGTTCCCTCAAG +
Preference number: 3 (lower is better)
Translates to: WTLVGGVTQELG*SSYGLQEGSLK
Trigger: CTTGAGGGAACCTTCCTGGAGCCCGTAGGAGCTTCATCCGAGCTCCTGGGTCACCCCGCCCACCAGAGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 72 bp CTCCCCGTGACATCGGGACCTGGCCACTCCTGGACGTaGTGCCCTAAGCTTGCCTCCCCTGCGGATGGATGT +
Preference number: 3 (lower is better)
Translates to: LPVTSGPGHSWT*CPKLASPADGC
Trigger: ACATCCATCCGCAGGGGAGGCAAGCTTAGGGCATCACGTCCAGGAGTGGCCAGGTCCCGATGTCACGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 72 bp CATCAAGCCCCCGACAACCCTCCAGACACCCTGGTCTaGAGGGGCAAGTGGAGGCCAGAGAACGCTCCGACA +
Preference number: 3 (lower is better)
Translates to: HQAPDNPPDTLV*RGKWRPENAPT
Trigger: TGTCGGAGCGTTCTCTGGCCTCCACTTGCCCCTGCAGACCAGGGTGTCTGGAGGGTTGTCGGGGGCTTGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 72 bp GGCACACTAAGGGAAGCTGGAAGCGCGTGGGGGAGATaGCTGCAGCTGCACGAAGGTGCCTGGGAATGGGCA +
Preference number: 3 (lower is better)
Translates to: GTLREAGSAWGR*LQLHEGAWEWA
Trigger: TGCCCATTCCCAGGCACCTTCGTGCAGCTGCAGGCATCTCCCCCACGCGCTTCCAGCTTCCCTTAGTGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 72 bp GGCCCAGGAGCTATGACCCTGTGGGGAGACCAAGATTaGCAAGAGGGAGGCTCGGCTCGCCTCCCCTTTCCA +
Preference number: 3 (lower is better)
Translates to: GPGAMTLWGDQD*QEGGSARLPFP
Trigger: TGGAAAGGGGAGGCGAGCCGAGCCTCCCTCTTGCCAATCTTGGTCTCCCCACAGGGTCATAGCTCCTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 72 bp GAGCGATTTCTCGGCGGAAAGCATGCTGGAACCCTGTaGAAGCGTGGGCTGTCCCAGGACGTGCAGGCAGGC +
Preference number: 3 (lower is better)
Translates to: ERFLGGKHAGTL*KRGLSQDVQAG
Trigger: GCCTGCCTGCACGTCCTGGGACAGCCCACGCTTCCACAGGGTTCCAGCATGCTTTCCGCCGAGAAATCGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 72 bp CACACGTGGCCACACACACGCCCTCCCCTCCATTTATaGCTGGCCCAGAGCTGCCCAGCCAGAGAGAGACCA +
Preference number: 3 (lower is better)
Translates to: HTWPHTRPPLHL*LAQSCPARERP
Trigger: TGGTCTCTCTCTGGCTGGGCAGCTCTGGGCCAGCCATAAATGGAGGGGAGGGCGTGTGTGTGGCCACGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CAA 90 bp ACGCAGAAAACCAACGCAGAGCAGCACAAACTAAGGGCCTGGGGGAGGCGGGAGGTGGGGAGACCAAGATaGGCAAGAGGGAGGCTCGGC +
Preference number: 3 (lower is better)
Translates to: TQKTNAEQHKLRAWGRREVGRPR*ARGRLG
Trigger: GCCGAGCCTCCCTCTTGCCAATCTTGGTCTCCCCAC...CTCCCGCCTCCCCCAGGCCCTTAGTTTGTGCTGCTCTGCGTTGGTTTTCTGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 72 bp GCACGTGTGGGGGAGATGCCTGCGGCTGCAAGAAGGTaGCTGGGAATGGGCACAGAAACTCTCCCTCCCCTT +
Preference number: 3 (lower is better)
Translates to: ARVGEMPAAARR*LGMGTETLPPL
Trigger: AAGGGGAGGGAGAGTTTCTGTGCCCATTCCCAGGCACCTTCTTGCAGCCGCAGGCATCTCCCCCACACGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 72 bp GGCTGTCCCAGGACGTGCAGGCAGGCCTTAGACCCCTaGCACATACAAGCAATCACCGGGGGTCAGCACACT +
Preference number: 3 (lower is better)
Translates to: GCPRTCRQALDP*HIQAITGGQHT
Trigger: AGTGTGCTGACCCCCGGTGATTGCTTGTATGTGGCAGGGGTCTAAGGCCTGCCTGCACGTCCTGGGACAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 72 bp ATAAGCAGCAGCGCAGAGCAGCACAAACGAAGGGCCTaGCTGCAGGATCAAAGAATGGGGTGGGGGCCCGGC +
Preference number: 3 (lower is better)
Translates to: ISSSAEQHKRRA*LQDQRMGWGPG
Trigger: GCCGGGCCCCCACCCCATTCTTTGATCCTGCAGGCAGGCCCTTCGTTTGTGCTGCTCTGCGCTGCTGCTTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 72 bp AAGCGCGTGGGGGAGATGCCTGCAGCTGCACGAAGGTaGCTGGGAATGGGCACAGAAACACTCCCTCCCCTT +
Preference number: 3 (lower is better)
Translates to: KRVGEMPAAARR*LGMGTETLPPL
Trigger: AAGGGGAGGGAGTGTTTCTGTGCCCATTCCCAGGCACCTTCGTGCAGCTGCAGGCATCTCCCCCACGCGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 72 bp TGGGGGAAGACGTCGGGTCAGAAGCACATCTGCTCCTaGGAGCCAGCCGGGAGCACCACCATGACTCTTGCT +
Preference number: 3 (lower is better)
Translates to: WGKTSGQKHICS*EPAGSTTMTLA
Trigger: AGCAAGAGTCATGGTGGTGCTCCCGGCTGGCTCTCAGGAGCAGATGTGCTTCTGACCCGACGTCTTCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 72 bp GCAGGACCCTCCAGGGACTCGGGAGAGACACATGCGTaGGCTTTTGCGATACGGGGTGAGACAGCAAGGGTG +
Preference number: 3 (lower is better)
Translates to: AGPSRDSGETHA*AFAIRGETARV
Trigger: CACCCTTGCTGTCTCACCCCGTATCGCAAAAGCTCACGCATGTGTCTCTCCCGAGTCCCTGGAGGGTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 72 bp CATGTCCCTCTCAGTGGCCTCCAACACTCCACTGGCTaGGTGCTCCCTGGACCCCGACCCATAACAAGTGTC +
Preference number: 3 (lower is better)
Translates to: HVPLSGLQHSTG*VLPGPRPITSV
Trigger: GACACTTGTTATGGGTCGGGGTCCAGGGAGCACCCAGCCAGTGGAGTGTTGGAGGCCACTGAGAGGGACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 72 bp CCTGTGTCCCTGGGACCCACCTCTTCCTGCATGGTGTaGTCAGCAATTCCTCCATCAAGCCCCCGACAACCC +
Preference number: 3 (lower is better)
Translates to: PVSLGPTSSCMV*SAIPPSSPRQP
Trigger: GGGTTGTCGGGGGCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGACACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 72 bp ACCCAGGCCGGGTGTGAGAAGAGGGCTTCCCCTCCCTaGCTAAGCAAGGGGGATGCTCCTCTGCAACTGAAT +
Preference number: 3 (lower is better)
Translates to: TQAGCEKRASPP*LSKGDAPLQLN
Trigger: ATTCAGTTGCAGAGGAGCATCCCCCTTGCTTAGCCAGGGAGGGGAAGCCCTCTTCTCACACCCGGCCTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 72 bp CCGCGAGAGGTACGTGTGAGAGCGACTGTCTCCGTGTaGGCGAGAAGCCTGGAAACGGAGGAACTGGGTTTC +
Preference number: 3 (lower is better)
Translates to: PREVRVRATVSV*ARSLETEELGF
Trigger: GAAACCCAGTTCCTCCGTTTCCAGGCTTCTCGCCCACACGGAGACAGTCGCTCTCACACGTACCTCTCGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 72 bp GGAAATGACTCTCCCACAACATACCCAGGCCGGGTGTaGGAAGAGGGCTTCCCCTCCCTGGCTAAGCAAGGG +
Preference number: 3 (lower is better)
Translates to: GNDSPTTYPGRV*EEGFPSLAKQG
Trigger: CCCTTGCTTAGCCAGGGAGGGGAAGCCCTCTTCTCACACCCGGCCTGGGTATGTTGTGGGAGAGTCATTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 72 bp CAGTGGCCTCCAACACTCCACTGGCTGGGTGCTCCCTaGACCCCGACCCATAACAAGTGTCCCTGTGATGTA +
Preference number: 3 (lower is better)
Translates to: QWPPTLHWLGAP*TPTHNKCPCDV
Trigger: TACATCACAGGGACACTTGTTATGGGTCGGGGTCCAGGGAGCACCCAGCCAGTGGAGTGTTGGAGGCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 72 bp CCCTCCGGACAGTGTTGTCCAGGACAGAAACACACGTaGCCACACACACGCCCTCCCCTCCATTTATGGCTG +
Preference number: 3 (lower is better)
Translates to: PSGQCCPGQKHT*PHTRPPLHLWL
Trigger: CAGCCATAAATGGAGGGGAGGGCGTGTGTGTGGCCACGTGTGTTTCTGTCCTGGACAACACTGTCCGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 72 bp ACCTCCCGAGCCTCTGAGCTACCTTTCATTCCCCTCTaGGCACGCAGGGTTAACTGCTGTAGGGGTTACCCC +
Preference number: 3 (lower is better)
Translates to: TSRASELPFIPL*ARRVNCCRGYP
Trigger: GGGGTAACCCCTACAGCAGTTAACCCTGCGTGCTCAGAGGGGAATGAAAGGTAGCTCAGAGGCTCGGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 72 bp AAGCCTGGAAACGGAGGAACTGGGTTTCCGAGGGACTaGATACCTCGGTTGATAGTCTGCGCGCTGGCCCAG +
Preference number: 3 (lower is better)
Translates to: KPGNGGTGFPRD*IPRLIVCALAQ
Trigger: CTGGGCCAGCGCGCAGACTATCAACCGAGGTATTCAGTCCCTCGGAAACCCAGTTCCTCCGTTTCCAGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 72 bp GATTGGGTCAGAGCTTACTCAGAAACCTCAGGCCAGTaGGGCTTCCAACCTCTGCAGCCCAGGCTGAGTGGC +
Preference number: 3 (lower is better)
Translates to: DWVRAYSETSGQ*GFQPLQPRLSG
Trigger: GCCACTCAGCCTGGGCTGCAGAGGTTGGAAGCCTCACTGGCCTGAGGTTTCTGAGTAAGCTCTGACCCAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 72 bp AAGTTGCCAAAATCATCACCAAGGATTCACCGAGGGTaGGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTC +
Preference number: 3 (lower is better)
Translates to: KLPKSSPRIHRG*VSGCVRGTRRL
Trigger: GAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGCAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
3UTR GCA 72 bp GAAGCTAGAAGCACGTGTGGGGGAGATGCCTGCGGCTaGAAGAAGGTGCCTGGGAATGGGCACAGAAACTCT +
Preference number: 3 (lower is better)
Translates to: EARSTCGGDACG*KKVPGNGHRNS
Trigger: AGAGTTTCTGTGCCCATTCCCAGGCACCTTCTTGCAGCCGCAGGCATCTCCCCCACACGTGCTTCTAGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 72 bp GGGACACTCGGTCTCTGCCACACTCAATGTCACCATTaGCACTGTAGTGCAGAAGCAGCCGTGGCTGCACTC +
Preference number: 3 (lower is better)
Translates to: GTLGLCHTQCHH*HCSAEAAVAAL
Trigger: GAGTGCAGCCACGGCTGCTTCTGCACTACAGTGGCAATGGTGACATTGAGTGTGGCAGAGACCGAGTGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 72 bp CACAACACACACACACACAGCAGCTATCTCCTTGGTTaGGGGCACTTCCCACTTAGGCCCCTCCGGACAGTG +
Preference number: 3 (lower is better)
Translates to: HNTHTHSSYLLG*GHFPLRPLRTV
Trigger: CACTGTCCGGAGGGGCCTAAGTGGGAAGTGCCCTCAACCAAGGAGATAGCTGCTGTGTGTGTGTGTGTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 72 bp TCCCAGCGTTCAACCGTGTATGTCACTAAGCTCAGGTaGTTGGGCCTCATGGGGGACTCCTACACAGCAGCT +
Preference number: 3 (lower is better)
Translates to: SQRSTVYVTKLR*LGLMGDSYTAA
Trigger: AGCTGCTGTGTAGGAGTCCCCCATGAGGCCCAAGCACCTGAGCTTAGTGACATACACGGTTGAACGCTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 72 bp CTTTCAGGAGGGCGCAGTTCAGCTAGTGACAGTGACTaGAGGTGTCTAAGCGGAGAGGATGGGCCACTCCAA +
Preference number: 3 (lower is better)
Translates to: LSGGRSSASDSD*RCLSGEDGPLQ
Trigger: TTGGAGTGGCCCATCCTCTCCGCTTAGACACCTGCAGTCACTGTCACTAGCTGAACTGCGCCCTCCTGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 72 bp AGCGTTCAACCGTGTATGTCACTAAGCTCAGGTGCTTaGGCCTCATGGGGGACTCCTACACAGCAGCTCCTG +
Preference number: 3 (lower is better)
Translates to: SVQPCMSLSSGA*ASWGTPTQQLL
Trigger: CAGGAGCTGCTGTGTAGGAGTCCCCCATGAGGCCCAAGCACCTGAGCTTAGTGACATACACGGTTGAACGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 72 bp GGGCCTCATGGGGGACTCCTACACAGCAGCTCCTGCTaGGCACTTTGGTGGCTGGAATATTCTAGAAAGAGG +
Preference number: 3 (lower is better)
Translates to: GPHGGLLHSSSC*ALWWLEYSRKR
Trigger: CCTCTTTCTAGAATATTCCAGCCACCAAAGTGCTCAGCAGGAGCTGCTGTGTAGGAGTCCCCCATGAGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 72 bp ACACAAGCCATTTTGCAACCTCACCTCCCGAGCCTCTaGGCTACCTTTCATTCCCCTCTGAGCACGCAGGGT +
Preference number: 3 (lower is better)
Translates to: TQAILQPHLPSL*ATFHSPLSTQG
Trigger: ACCCTGCGTGCTCAGAGGGGAATGAAAGGTAGCTCAGAGGCTCGGGAGGTGAGGTTGCAAAATGGCTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 72 bp TCTGCCCAGGCTTTTCATTTCTTCTGGGCTCCCTGGTaGCTCCCACGTGCATGTGTAGAACAGCATTCAGCC +
Preference number: 3 (lower is better)
Translates to: SAQAFHFFWAPW*LPRACVEQHSA
Trigger: GGCTGAATGCTGTTCTACACATGCACGTGGGAGGCACCAGGGAGCCCAGAAGAAATGAAAAGCCTGGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 72 bp TCTCCGTGTGGGCGAGAAGCCTGGAAACGGAGGAACTaGGTTTCCGAGGGACTGAATACCTCGGTTGATAGT +
Preference number: 3 (lower is better)
Translates to: SPCGREAWKRRN*VSEGLNTSVDS
Trigger: ACTATCAACCGAGGTATTCAGTCCCTCGGAAACCCAGTTCCTCCGTTTCCAGGCTTCTCGCCCACACGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 72 bp GGAAACCAGAAATTCAAGATGAAGGTGCTGCAGGGTTaGCTTCCGCCAAGGCCTCTCTCCTTGGCTCCCAGA +
Preference number: 3 (lower is better)
Translates to: GNQKFKMKVLQG*LPPRPLSLAPR
Trigger: TCTGGGAGCCAAGGAGAGAGGCCTTGGCGGAAGCCAACCCTGCAGCACCTTCATCTTGAATTTCTGGTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 72 bp GGCTCTGGGGGACACACGAAATCACAGATGGGAATCTaGGAGTGCCAAGCCCGTGGGAATTGCCATTTATTC +
Preference number: 3 (lower is better)
Translates to: GSGGHTKSQMGI*ECQARGNCHLF
Trigger: GAATAAATGGCAATTCCCACGGGCTTGGCACTCCCAGATTCCCATCTGTGATTTCGTGTGTCCCCCAGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 72 bp CCCAGGCTGAGTGGCTTGAGTAGCACATTCACTGTGTaGCAGAACTGCGAGTCTGCCCAGGCTTTTCATTTC +
Preference number: 3 (lower is better)
Translates to: PRLSGLSSTFTV*QNCESAQAFHF
Trigger: GAAATGAAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCCACTCAGCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CAA 90 bp CTCAATCGGGGACAACAGCAGGCTCCCAGCATTCTCCCAGCGTTCAACCGTGTATCGTCCTCAGCTTTTTaGAAGAGAAAGGGAGTGCAG +
Preference number: 3 (lower is better)
Translates to: LNRGQQQAPSILPAFNRVSSSAF*KRKGVQ
Trigger: CTGCACTCCCTTTCTCTTCAAAAAAGCTGAGGACGA...TACACGGTTGAACGCTGGGAGAATGCTGGGAGCCTGCTGTTGTCCCCGATTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CAA 90 bp GAGAGCGACTGTCTCCGTGTGGGCGAGAAGCCTGGAAACGGAGGAACTGGGTTTCAAGCCTCTGGGTTTTaGTCTTGTTTTTCAATCCTG +
Preference number: 3 (lower is better)
Translates to: ESDCLRVGEKPGNGGTGFQASGF*SCFSIL
Trigger: CAGGATTGAAAAACAAGACAAAAACCCAGAGGCTTG...AAACCCAGTTCCTCCGTTTCCAGGCTTCTCGCCCACACGGAGACAGTCGCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CAA 90 bp GGCTTGAGTAGCACATTCACTGTGTGGCAGAACTGCGAGTCTGCCCAGGCTTTTCCAAGCCCGTGGGAATaGCCATTTATTCCCAAAGTT +
Preference number: 3 (lower is better)
Translates to: GLSSTFTVWQNCESAQAFPSPWE*PFIPKV
Trigger: AACTTTGGGAATAAATGGCAATTCCCACGGGCTTGG...AAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CAA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGAACTCGGGCACAGACTaGGGAGGTTCCTGGGTAATC +
Preference number: 3 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGNSGTD*GGSWVI
Trigger: GATTACCCAGGAACCTCCCAAGTCTGTGCCCGAGTT...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 72 bp AGTGGCTTGAGTAGCACATTCACTGTGTGGCAGAACTaGGAGTCTGCCCAGGCTTTTCATTTCTTCTGGGCT +
Preference number: 3 (lower is better)
Translates to: SGLSSTFTVWQN*ESAQAFHFFWA
Trigger: AGCCCAGAAGAAATGAAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 72 bp TCCTCACGGCCATTTAACAAGCTCGCCATCCCACTGTaGGGAGAGAGACACATCTGCTGTAGAAAGAGTGAT +
Preference number: 3 (lower is better)
Translates to: SSRPFNKLAIPL*GERHICCRKSD
Trigger: ATCACTCTTTCTACAGCAGATGTGTCTCTCTCCCCACAGTGGGATGGCGAGCTTGTTAAATGGCCGTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CAA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTAAACAGAAAAATGAGTaGGCTGTGGTCGCACGCACC +
Preference number: 3 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLKQKNE*AVVART
Trigger: GGTGCGTGCGACCACAGCCAACTCATTTTTCTGTTT...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CAA 90 bp GAGAGCGACTGTCTCCGTGTGGGCGAGAAGCCTGGAAACGGAGGAACTGGGTTTCATGAGTTATACCTTTaGACAGTAACACACAACGAT +
Preference number: 3 (lower is better)
Translates to: ESDCLRVGEKPGNGGTGFHELYL*TVTHND
Trigger: ATCGTTGTGTGTTACTGTCAAAAGGTATAACTCATG...AAACCCAGTTCCTCCGTTTCCAGGCTTCTCGCCCACACGGAGACAGTCGCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 72 bp AAGCTTGCCTCCCCTGCGGATGGATGTAGTGATGCTTaGTTTGGGTGGATGAGAACATTCCCCACAACACAA +
Preference number: 3 (lower is better)
Translates to: KLASPADGCSDA*FGWMRTFPTTQ
Trigger: TTGTGTTGTGGGGAATGTTCTCATCCACCCAAATCAAGCATCACTACATCCATCCGCAGGGGAGGCAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 72 bp GATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGATaGAGGTGCTGCAGGGTTGGCTTCCGCCAAGGCCTC +
Preference number: 3 (lower is better)
Translates to: DFLTVLETRNSR*RCCRVGFRQGL
Trigger: GAGGCCTTGGCGGAAGCCAACCCTGCAGCACCTTCATCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 72 bp AAAGAAGAACCAAGGAGTTTGCCACGGCCATGTGGGTaGGAATCTTGTGTGTGGGCCTCATTTGATGCTCAG +
Preference number: 3 (lower is better)
Translates to: KEEPRSLPRPCG*ESCVWASFDAQ
Trigger: CTGAGCATCAAATGAGGCCCACACACAAGATTCTCACCCACATGGCCGTGGCAAACTCCTTGGTTCTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 72 bp CATGCTGGCCACATTTCAACTGTTCTACGTGGCATGTaGCTAGTGGCATCCCTTTTGTACAGCACAGAGAAC +
Preference number: 3 (lower is better)
Translates to: HAGHISTVLRGM*LVASLLYSTEN
Trigger: GTTCTCTGTGCTGTACAAAAGGGATGCCACTAGCCACATGCCACGTAGAACAGTTGAAATGTGGCCAGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 72 bp ATGGCCACTTCCCCTATGGTTCTTAGGACATTGTTCTaGAAAGACATGGGGAGGGTTTCCAGGTGGTCTGAA +
Preference number: 3 (lower is better)
Translates to: MATSPMVLRTLF*KDMGRVSRWSE
Trigger: TTCAGACCACCTGGAAACCCTCCCCATGTCTTTTCAGAACAATGTCCTAAGAACCATAGGGGAAGTGGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 72 bp CCAGGCGAAACAGTATCATTTCTAACCCTTTTCATGTaGCTGTCAGGACATGTTTCAAGCACCGAGTCCAGC +
Preference number: 3 (lower is better)
Translates to: PGETVSFLTLFM*LSGHVSSTESS
Trigger: GCTGGACTCGGTGCTTGAAACATGTCCTGACAGCCACATGAAAAGGGTTAGAAATGATACTGTTTCGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CAA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGAAGTCAGGAGAATCGCTaGAACCCGGGAGGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRSQENR*NPGGGG
Trigger: ACCTCCGCCTCCCGGGTTCAAGCGATTCTCCTGACT...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 72 bp AGAACAGCATTCAGCCAGAGATGCTTGGGAAGTGGATaGTGTCTACCATTCTACGGATCACTTGCGATGCTT +
Preference number: 3 (lower is better)
Translates to: RTAFSQRCLGSG*CLPFYGSLAML
Trigger: AAGCATCGCAAGTGATCCGTAGAATGGTAGACATCATCCACTTCCCAAGCATCTCTGGCTGAATGCTGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 72 bp CTGGACAGGTTTACAAAACATATCTCCCCATCTCCCTaGAGTCAGCAGCTATCGGTATCTATGCTAAGTTCC +
Preference number: 3 (lower is better)
Translates to: LDRFTKHISPSP*SQQLSVSMLSS
Trigger: GGAACTTAGCATAGATACCGATAGCTGCTGACTGCAGGGAGATGGGGAGATATGTTTTGTAAACCTGTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 72 bp GATGAGAACAGCATTCAGCCAGAGATGCTTGGGAAGTaGATGATGTCTACCATTCTACGGATCACTTGCGAT +
Preference number: 3 (lower is better)
Translates to: DENSIQPEMLGK*MMSTILRITCD
Trigger: ATCGCAAGTGATCCGTAGAATGGTAGACATCATCCACTTCCCAAGCATCTCTGGCTGAATGCTGTTCTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR GCA 72 bp GGGAAGTGGATGATGTCTACCATTCTACGGATCACTTaGGATGCTTATTTCCCAGGGAACAGAAATGAAGTG +
Preference number: 3 (lower is better)
Translates to: GKWMMSTILRIT*DAYFPGNRNEV
Trigger: CACTTCATTTCTGTTCCCTGGGAAATAAGCATCGCAAGTGATCCGTAGAATGGTAGACATCATCCACTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CAA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGGGAGACACAAGGTCCTaGTTCAAATCATGTATTTCT +
Preference number: 3 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGGDTRS*FKSCIS
Trigger: AGAAATACATGATTTGAACAAGGACCTTGTGTCTCC...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 72 bp AGCGCTATAGAACGTCAATGGATTTTCTCACAGTTCTaGAAACCAGAAATTCAAGATGAAGGTGCTGCAGGG +
Preference number: 3 (lower is better)
Translates to: SAIERQWIFSQF*KPEIQDEGAAG
Trigger: CCCTGCAGCACCTTCATCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR-3UTR CAA 90 bp TTCATGTGGCTGTCAGGACATGTTTCAAGCACCGAGTCCAGCATCTTGATAAGAAAACTTATCCTTAATTaGGTGAATGGAGGGTCTGAC +
Preference number: 3 (lower is better)
Translates to: FMWLSGHVSSTESSILIRKLILN*VNGGSD
Trigger: GTCAGACCCTCCATTCACCAAATTAAGGATAAGTTT...TCTTATCAAGATGCTGGACTCGGTGCTTGAAACATGTCCTGACAGCCACATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CCA 72 bp ATTGTGGACCTACTCTTGGATCTCTTGGCACACTCCTaGATTCTTTGGATATTTGGGAGGCTGAATTTTCTA +
Preference number: 3 (lower is better)
Translates to: IVDLLLDLLAHS*ILWIFGRLNFL
Trigger: TAGAAAATTCAGCCTCCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR TCA 72 bp TGCTATGCAGACCTCTGGCTTCCCATCCAGCATACCTaGACTAAGACTTATTTTGTCTTACACTTTATACTC +
Preference number: 3 (lower is better)
Translates to: CYADLWLPIQHT*TKTYFVLHFIL
Trigger: GAGTATAAAGTGTAAGACAAAATAAGTCTTAGTTCAGGTATGCTGGATGGGAAGCCAGAGGTCTGCATAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp TCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGTGGCGGTCAGCCCCCTaGCCCGCTCGGCCTCGGTGT +
Preference number: 4 (lower is better)
Translates to: SPRIHRGCVSGCVRGTRRWRSAP*PARPRC
Trigger: ACACCGAGGCCGAGCGGGGCAGGGGGCTGACCGCCA...CCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR TCA 90 bp CCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACACTGACTAGGCTGAGGGCCCACTaGCCGGGACCCCACCATCGG +
Preference number: 4 (lower is better)
Translates to: PRVRERVREGNEEAQTLTRLRAH*PGPHHR
Trigger: CCGATGGTGGGGTCCCGGTCAGTGGGCCCTCAGCCT...AGTCAGTGTTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR TCA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGGGAGCTGGTTCAGGGTaGGCGTCGCGGGAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGGAGSG*ASREAR
Trigger: CCGCGCCTCCCGCGACGCTCACCCTGAACCAGCTCC...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR GCA 90 bp CCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCCTCCCGGACGAAGGCTaGGGCAGGTGCTGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: PRIHRGCVSGCVRGTRRLLPDEG*GRCWQV
Trigger: GACCTGCCAGCACCTGCCGCAGCCTTCGTCCGGGAG...GAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR GCA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAATCCTCCCCGCTGCTCTaGGGCCACGCCTGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKSSPLL*GHACSA
Trigger: GGCGGAGCAGGCGTGGCCGCAGAGCAGCGGGGAGGA...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp CCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACACTGACTAGGTGGGGGCAGCCGTaGGGACGGCAGCAGCCATGG +
Preference number: 4 (lower is better)
Translates to: PRVRERVREGNEEAQTLTRWGQP*GRQQPW
Trigger: CCATGGCTGCTGCCGTCCCCACGGCTGCCCCCACCT...AGTCAGTGTTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp TCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGAGGGGTTGGAGGCCTTaGCTCCAGGCGGCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: SPRIHRGCVSGCVRGTRRRGWRP*LQAAWG
Trigger: GCCCCACGCCGCCTGGAGCCAAGGCCTCCAACCCCT...CCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp CCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCGGAAGGGCCAGTGGCTaGGCCTCCGCCTGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: PRIHRGCVSGCVRGTRRLGRASG*ASAWQE
Trigger: TTCCTGCCAGGCGGAGGCCCAGCCACTGGCCCTTCC...GAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR TCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGGGAGCTGGTTCAGGGTaGGCGTCGCGGGAGGCGCGG +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGGAGSG*ASREAR
Trigger: CCGCGCCTCCCGCGACGCTCACCCTGAACCAGCTCC...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR TCA 90 bp CCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACACTGACTCCCTGGGTCCCTGGATaGAGGGGCTCTGGGGGACAC +
Preference number: 4 (lower is better)
Translates to: PRVRERVREGNEEAQTLTPWVPG*RGSGGH
Trigger: GTGTCCCCCAGAGCCCCTTCATCCAGGGACCCAGGG...AGTCAGTGTTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp CCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACACTGACTCCAGCTCTCCTGCGCTaGTCCCGGAGGTCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: PRVRERVREGNEEAQTLTPALLR*SRRSAV
Trigger: CACTGCCGACCTCCGGGAGCAGCGCAGGAGAGCTGG...AGTCAGTGTTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR GCA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAATCCCACAACCCCGCCTaGGGCTCCGTCCGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKSHNPA*GSVRSP
Trigger: CGGAGAGCGGACGGAGCCGCAGGCGGGGTTGTGGGA...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGCCTCACGCCGGGCTCTaGGGGGTCATGGCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGPHAGL*GVMAVS
Trigger: GCTGACCGCCATGACCCCCCAGAGCCCGGCGTGAGG...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAAAGGGGTTGGAGGCCTTaGCTCCAGGCGGCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKRGWRP*LQAAWG
Trigger: GCCCCACGCCGCCTGGAGCCAAGGCCTCCAACCCCT...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp CCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCCCACCTGGACCTGTGTaGGCTACAGCTCCGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PRIHRGCVSGCVRGTRRLPPGPV*ATAPPG
Trigger: GCCTGGCGGAGCTGTAGCCCACACAGGTCCAGGTGG...GAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACACTGACTGGACTCTGGTGGGCCTaGACTCTGGTGGGCGGGGTG +
Preference number: 4 (lower is better)
Translates to: PRVRERVREGNEEAQTLTGLWWA*TLVGGV
Trigger: CACCCCGCCCACCAGAGTCCAGGCCCACCAGAGTCC...AGTCAGTGTTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CAA 72 bp GTGCTGCAGGGTTGGCTTCCGCCAAGGCCTCTCTCCTaGGCTCCCAGACGGCTGTCTTCTCCCGGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: VLQGWLPPRPLS*APRRLSSPGVL
Trigger: GAGGACGCCGGGAGAAGACAGCCGTCTGGGAGCCAAGGAGAGAGGCCTTGGCGGAAGCCAACCCTGCAGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp CCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCCAGGAGCTGGGGCCGTaGAGACGTCAGCAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: PRIHRGCVSGCVRGTRRLQELGP*RRQQGP
Trigger: TGGACCTTGCTGACGTCTTCACGGCCCCAGCTCCTG...GAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR TCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGCCAGGGATCGGAGGCTaGGGGCCCACTGACCGGGAC +
Preference number: 4 (lower is better)
Translates to: IITKDSPRVRERVREGNEPGIGG*GPTDRD
Trigger: GTCCCGGTCAGTGGGCCCTCAGCCTCCGATCCCTGG...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR TCA 90 bp ACGCAGAAAACCAACGCAGAGCAGCACAAACTAAGGGCCTGGGGGAGGCGGGAGCCAGGGATCGGAGGCTaGGGGCCCACTGACCGGGAC +
Preference number: 4 (lower is better)
Translates to: TQKTNAEQHKLRAWGRREPGIGG*GPTDRD
Trigger: GTCCCGGTCAGTGGGCCCTCAGCCTCCGATCCCTGG...CTCCCGCCTCCCCCAGGCCCTTAGTTTGTGCTGCTCTGCGTTGGTTTTCTGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGCCCTCCCCAGGGATCTaGGAAGGCCGGGGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: IITKDSPRVRERVREGNEPSPGI*EGRGRC
Trigger: ACACCGGCCCCGGCCTTCTCAGATCCCTGGGGAGGG...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR TCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGCCCTCCCCAGGGATCTaGGAAGGCCGGGGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGPSPGI*EGRGRC
Trigger: ACACCGGCCCCGGCCTTCTCAGATCCCTGGGGAGGG...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR TCA 90 bp CCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACACTGACTCGGGAGGCACAGGACTaGGACGGAGCTGGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: PRVRERVREGNEEAQTLTREAQD*DGAGSG
Trigger: CCCTGAACCAGCTCCGTCTCAGTCCTGTGCCTCCCG...AGTCAGTGTTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR TCA 90 bp CCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAGCTGTCGGAGTCACTaGGGGAGCGAACCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: PRIHRGCVSGCVRGTRRLSCRSH*GSEPSR
Trigger: ACGGCTGGGTTCGCTCCCTCAGTGACTCCGACAGCT...GAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp GAGGGCGGGAGTAGAGCGAGGGGTAAGGCTAGGGTGAGCACAGGTGGCAGGGGACCTCCCCTTTCCATGTaGTCCCACCCAGAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: EGGSRARGKARVSTGGRGPPLSM*SHPELP
Trigger: CGGCAGCTCTGGGTGGGATCACATGGAAAGGGGAGG...TCCCCTGCCACCTGTGCTCACCCTAGCCTTACCCCTCGCTCTACTCCCGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GTGCTCCAGGGGAGGGGCCATGAGGAGGCTGTAGGTGAAACAGGAGTGGTTCAATGGCGGTCAGCCCCCTaGCCCGCTCGGCCTCGGTGT +
Preference number: 4 (lower is better)
Translates to: VLQGRGHEEAVGETGVVQWRSAP*PARPRC
Trigger: ACACCGAGGCCGAGCGGGGCAGGGGGCTGACCGCCA...TTGAACCACTCCTGTTTCACCTACAGCCTCCTCATGGCCCCTCCCCTGGAGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp CCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACACTGACTGACATGGTGCCCGGCTaGAGCAGCAAGGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: PRVRERVREGNEEAQTLTDMVPG*SSKGHR
Trigger: CCTGTGCCCCTTGCTGCTGCAGCCGGGCACCATGTC...AGTCAGTGTTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR GCA 90 bp CCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCCCCCGGCTGCTGTTGTaGCATTGGTGCTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PRIHRGCVSGCVRGTRRLPRLLL*HWCWAW
Trigger: CCAAGCCCAGCACCAATGGCACAACAGCAGCCGGGG...GAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GAGGGCGGGAGTAGAGCGAGGGGTAAGGCTAGGGTGAGCACAGGTGGCAGGGGACCAGACACCCTGGTCTaGAGGGGCAAGTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: EGGSRARGKARVSTGGRGPDTLV*RGKWRP
Trigger: TGGCCTCCACTTGCCCCTGCAGACCAGGGTGTCTGG...TCCCCTGCCACCTGTGCTCACCCTAGCCTTACCCCTCGCTCTACTCCCGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp CCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACACTGACTGGCTGTCCCAGGACGTaGAGGCAGGCCTTAGACCCC +
Preference number: 4 (lower is better)
Translates to: PRVRERVREGNEEAQTLTGCPRT*RQALDP
Trigger: GGGGTCTAAGGCCTGCCTGCACGTCCTGGGACAGCC...AGTCAGTGTTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGGGCTGCGGCAGGTGCTaGCAGGTCACCGCATCTCGG +
Preference number: 4 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGGCGRC*QVTASR
Trigger: CCGAGATGCGGTGACCTGCCAGCACCTGCCGCAGCC...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGAGGTGGGGGCAGCCGTaGGGACGGCAGCAGCCATGG +
Preference number: 4 (lower is better)
Translates to: IITKDSPRVRERVREGNERWGQP*GRQQPW
Trigger: CCATGGCTGCTGCCGTCCCCACGGCTGCCCCCACCT...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGCCCATGGATCAGGCGTaGGCCCCTCCCCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGPMDQA*APPQLQ
Trigger: CTGCAGCTGGGGAGGGGCCCACGCCTGATCCATGGG...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGGCGGGAGGCGCGGGCTaGAAGGGGTTGGTGACGGAA +
Preference number: 4 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGAGGAG*KGLVTE
Trigger: TTCCGTCACCAACCCCTTCCAGCCCGCGCCTCCCGC...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGAATGGGGCAGCCGGATaGAGCCAGGCCCCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGNGAAG*SQAPFR
Trigger: GCGGAAGGGGGCCTGGCTCCATCCGGCTGCCCCATT...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGCCGCAGGACGGGGGCTaGTCGGCCTCCTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: IITKDSPRVRERVREGNEPQDGG*SASSLL
Trigger: GAGCAAGGAGGAGGCCGACCAGCCCCCGTCCTGCGG...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp AAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGGCCAGCTGGAGCTaGGCGTCGTCCTCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: KSSPRIHRGCVSGCVRGTRASWS*ASSSGP
Trigger: CGGCCCCGAGGACGACGCCCAGCTCCAGCTGGCCCT...CGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCCTGAGGCCCTGGCTGTaGGGCCTGCAACAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: PRIHRGCVSGCVRGTRRLLRPWL*GLQQAV
Trigger: GACAGCTTGTTGCAGGCCCCACAGCCAGGGCCTCAG...GAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CAA 72 bp GGGCCCAGGAGCTATGACCCTGTGGGGAGACCAAGATaGGCAAGAGGGAGGCTCGGCTCGCCTCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: GPRSYDPVGRPR*ARGRLGSPPLS
Trigger: GGAAAGGGGAGGCGAGCCGAGCCTCCCTCTTGCCAATCTTGGTCTCCCCACAGGGTCATAGCTCCTGGGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp AAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGCTGAGGGCCCACTaGCCGGGACCCCACCATCGG +
Preference number: 4 (lower is better)
Translates to: KSSPRIHRGCVSGCVRGTRLRAH*PGPHHR
Trigger: CCGATGGTGGGGTCCCGGTCAGTGGGCCCTCAGCCT...CGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR TCA 90 bp GAGGGCGGGAGTAGAGCGAGGGGTAAGGCTAGGGTGAGCACAGGTGGCAGGGGAGGCAGGAGAATGGCGTaGACACAGGAGGCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: EGGSRARGKARVSTGGRGGRRMA*TQEAEL
Trigger: AAGCTCCGCCTCCTGTGTTCACGCCATTCTCCTGCC...TCCCCTGCCACCTGTGCTCACCCTAGCCTTACCCCTCGCTCTACTCCCGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGGGCACAGGGCCCCGATaGGTGGAGAGATGGGGCGAC +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGGTGPR*VERWGD
Trigger: GTCGCCCCATCTCTCCACGCATCGGGGCCCTGTGCC...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR GCA 90 bp TCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGTTCTCCTTGCACTGCTaGGACACGCGCTCCGAGCCG +
Preference number: 4 (lower is better)
Translates to: SPRIHRGCVSGCVRGTRRFSLHC*DTRSEP
Trigger: CGGCTCGGAGCGCGTGTCGCAGCAGTGCAAGGAGAA...CCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR GCA 90 bp TCCCTGGGACCCACCTCTTCCTGCATGGTGTGGTCAGCAATTCCTCCATCAAGCTCCTCCCCGCTGCTCTaGGGCCACGCCTGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: SLGPTSSCMVWSAIPPSSSSPLL*GHACSA
Trigger: GGCGGAGCAGGCGTGGCCGCAGAGCAGCGGGGAGGA...GCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGCCCGGAGGTCGGCAGTaGCGTGCGGAGTCGGTCAAA +
Preference number: 4 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGPGGRQ*RAESVK
Trigger: TTTGACCGACTCCGCACGGCACTGCCGACCTCCGGG...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR GCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGCAGCTCCAGCTCTCCTaGGCTGCTCCCGGAGGTCGG +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGQLQLS*AAPGGR
Trigger: CCGACCTCCGGGAGCAGCGCAGGAGAGCTGGAGCTG...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR GCA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGCCGGGAGGTGGAGGTTaGGGTGAGCCGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGPGGGG*GEPRSC
Trigger: GCACGATCTCGGCTCACCGCAACCTCCACCTCCCGG...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp CCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACACTGACTAGCGCGTGGGGGAGATaGCTGCAGCTGCACGAAGGT +
Preference number: 4 (lower is better)
Translates to: PRVRERVREGNEEAQTLTSAWGR*LQLHEG
Trigger: ACCTTCGTGCAGCTGCAGGCATCTCCCCCACGCGCT...AGTCAGTGTTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp CCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCGCTGTGGGGTGTGTGTaGCTTCCCCCAGACAGTGTG +
Preference number: 4 (lower is better)
Translates to: PRIHRGCVSGCVRGTRRLAVGCV*LPPDSV
Trigger: CACACTGTCTGGGGGAAGGCACACACACCCCACAGC...GAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp ACGCAGAAAACCAACGCAGAGCAGCACAAACTAAGGGCCTGGGGGAGGCGGGAGGGCTGCGGCAGGTGCTaGCAGGTCACCGCATCTCGG +
Preference number: 4 (lower is better)
Translates to: TQKTNAEQHKLRAWGRREGCGRC*QVTASR
Trigger: CCGAGATGCGGTGACCTGCCAGCACCTGCCGCAGCC...CTCCCGCCTCCCCCAGGCCCTTAGTTTGTGCTGCTCTGCGTTGGTTTTCTGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACACTGACTCGATGCGTGGAGAGATaGGGCGACTCCCGGACGAAG +
Preference number: 4 (lower is better)
Translates to: PRVRERVREGNEEAQTLTRCVER*GDSRTK
Trigger: CTTCGTCCGGGAGTCGCCCCATCTCTCCACGCATCG...AGTCAGTGTTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACGGATCCGCTCCTCCTaGTCGGCCTCCTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKRIRSS*SASSLL
Trigger: GAGCAAGGAGGAGGCCGACCAGGAGGAGCGGATCCG...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000085079.11
CDS-3UTR CCA 90 bp TCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGAGAGATGTACGTGGGTaGCGCTCCAGGGACGGGAGG +
Preference number: 4 (lower is better)
Translates to: SPRIHRGCVSGCVRGTRRRDVRG*RSRDGR
Trigger: CCTCCCGTCCCTGGAGCGCCACCCACGTACATCTCT...CCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAAGGGGAGAGATGTACGTaGGTGGCGCTCCAGGGACGG +
Preference number: 4 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKGERCT*VALQGR
Trigger: CCGTCCCTGGAGCGCCACCCACGTACATCTCTCCCC...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGACCACCCTGGCCGTCTaGAGCTTGTCCCAGCCCGGC +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGTTLAV*SLSQPG
Trigger: GCCGGGCTGGGACAAGCTCCAGACGGCCAGGGTGGT...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCCCTCCCCTCCATTTATaGCTGGCCCAGAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PRIHRGCVSGCVRGTRRLPPLHL*LAQSCP
Trigger: TGGGCAGCTCTGGGCCAGCCATAAATGGAGGGGAGG...GAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCGTGAGCAAGGGGCGCTaGAGAAAGAGCGTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: PRIHRGCVSGCVRGTRRLVSKGR*RKSVES
Trigger: GCTCTCCACGCTCTTTCTCCAGCGCCCCTTGCTCAC...GAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGCAGGAGCTGGGGCCGTaGAGACGTCAGCAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGQELGP*RRQQGP
Trigger: TGGACCTTGCTGACGTCTTCACGGCCCCAGCTCCTG...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR TCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGCTGGAAGGGGTTGGTaGCGGAAGGGCCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: IITKDSPRVRERVREGNEAGRGW*RKGQWL
Trigger: CAGCCACTGGCCCTTCCGTCACCAACCCCTTCCAGC...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR TCA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAAGAAGAGGGTGTAGTGTaGGTGGGCCCCAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKEEGVV*VGPRKG
Trigger: CCCCTTCCTGGGGCCCACTCACACTACACCCTCTTC...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR TCA 90 bp ACGCAGAAAACCAACGCAGAGCAGCACAAACTAAGGGCCTGGGGGAGGCGGGAGCCAGCCGTCAGGACTTaGCCCCAGGGGATCACGGAG +
Preference number: 4 (lower is better)
Translates to: TQKTNAEQHKLRAWGRREPAVRT*PQGITE
Trigger: CTCCGTGATCCCCTGGGGTCAAGTCCTGACGGCTGG...CTCCCGCCTCCCCCAGGCCCTTAGTTTGTGCTGCTCTGCGTTGGTTTTCTGCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp GAGGGCGGGAGTAGAGCGAGGGGTAAGGCTAGGGTGAGCACAGGTGGCAGGGGATCTGCAATCCCCAGGTaGCGTAGGTCTGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: EGGSRARGKARVSTGGRGSAIPR*RRSVHQ
Trigger: CTGGTGGACAGACCTACGTCACCTGGGGATTGCAGA...TCCCCTGCCACCTGTGCTCACCCTAGCCTTACCCCTCGCTCTACTCCCGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp CCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCATGGCGCTTGAGGGATaGGCTGGACAACCCACAGTC +
Preference number: 4 (lower is better)
Translates to: PRIHRGCVSGCVRGTRRLMALEG*AGQPTV
Trigger: GACTGTGGGTTGTCCAGCTCATCCCTCAAGCGCCAT...GAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAAACGAGGTCGACATGGTaGCCGGCTGCAGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKTRSTW*PAAAAR
Trigger: CCTTGCTGCTGCAGCCGGGCACCATGTCGACCTCGT...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR GCA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAAGGGACGACTCCTCCTTaGCCCCAGTCTCCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKGTTPP*PQSPSC
Trigger: GCAAGAGGGAGACTGGGGGCAAGGAGGAGTCGTCCC...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR GCA 90 bp GAGAGCGACTGTCTCCGTGTGGGCGAGAAGCCTGGAAACGGAGGAACTGGGTTTCCAGCTCTCCTGCGCTaGTCCCGGAGGTCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: ESDCLRVGEKPGNGGTGFPALLR*SRRSAV
Trigger: CACTGCCGACCTCCGGGAGCAGCGCAGGAGAGCTGG...AAACCCAGTTCCTCCGTTTCCAGGCTTCTCGCCCACACGGAGACAGTCGCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGGACAGAGGGGCTGGTTaGCAGCCACCCCCGAGAAAG +
Preference number: 4 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGDRGAG*QPPPRK
Trigger: CTTTCTCGGGGGTGGCTGGCAACCAGCCCCTCTGTC...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 24 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGACTCCACTGGCTGGGTaGTCCCTGGACCCCGACCCA +
Preference number: 4 (lower is better)
Translates to: IITKDSPRVRERVREGNETPLAG*SLDPDP
Trigger: TGGGTCGGGGTCCAGGGAGCACCCAGCCAGTGGAGT...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGTCAGCTGGCTCTCTGTaGCCTGTGGGGCTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGSAGSL*PVGLPH
Trigger: ATGGGGGAGCCCCACAGGGCACAGAGAGCCAGCTGA...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp AAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGCTCTCCGGCGCCCTCTaGTGGGCCAGCAGCCGAAAC +
Preference number: 4 (lower is better)
Translates to: KSSPRIHRGCVSGCVRGTLSGAL*WASSRN
Trigger: GTTTCGGCTGCTGGCCCAGCAGAGGGCGCCGGAGAG...CGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp AAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGCAGGGCCCCGATGCGTaGAGAGATGGGGCGACTCCC +
Preference number: 4 (lower is better)
Translates to: KSSPRIHRGCVSGCVRGTQGPDA*RDGATP
Trigger: GGGAGTCGCCCCATCTCTCCACGCATCGGGGCCCTG...CGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACGACGAGGGCTGCATTaGGCCCCAGGAATGACTCCG +
Preference number: 4 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKRRGLH*APGMTP
Trigger: CGGAGTCATTCCTGGGGCCCAATGCAGCCCTCGTCG...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGCTGGCAGGAAGGGGTTaGAGGCCTTGGCTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGLAGRG*RPWLQA
Trigger: CGCCTGGAGCCAAGGCCTCCAACCCCTTCCTGCCAG...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp GTGCTCCAGGGGAGGGGCCATGAGGAGGCTGTAGGTGAAACAGGAGTGGTTCAAGGAAGGGCCAGTGGCTaGGCCTCCGCCTGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: VLQGRGHEEAVGETGVVQGRASG*ASAWQE
Trigger: TTCCTGCCAGGCGGAGGCCCAGCCACTGGCCCTTCC...TTGAACCACTCCTGTTTCACCTACAGCCTCCTCATGGCCCCTCCCCTGGAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAAGGACTGAGACGGAGCTaGTTCAGGGTGAGCGTCGCG +
Preference number: 4 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKGLRRS*FRVSVA
Trigger: CGCGACGCTCACCCTGAACCAGCTCCGTCTCAGTCC...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp AAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGCCCAGGGAGCCGGAATaGGGCAGCCGGATGGAGCCA +
Preference number: 4 (lower is better)
Translates to: KSSPRIHRGCVSGCVRGTPREPE*GSRMEP
Trigger: TGGCTCCATCCGGCTGCCCCATTCCGGCTCCCTGGG...CGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp GAGAGCGACTGTCTCCGTGTGGGCGAGAAGCCTGGAAACGGAGGAACTGGGTTTCCCAGGGAGCCGGAATaGGGCAGCCGGATGGAGCCA +
Preference number: 4 (lower is better)
Translates to: ESDCLRVGEKPGNGGTGFPREPE*GSRMEP
Trigger: TGGCTCCATCCGGCTGCCCCATTCCGGCTCCCTGGG...AAACCCAGTTCCTCCGTTTCCAGGCTTCTCGCCCACACGGAGACAGTCGCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GAGGGCGGGAGTAGAGCGAGGGGTAAGGCTAGGGTGAGCACAGGTGGCAGGGGATCACAGATGGGAATCTaGGAGTGCCAAGCCCGTGGG +
Preference number: 4 (lower is better)
Translates to: EGGSRARGKARVSTGGRGSQMGI*ECQARG
Trigger: CCCACGGGCTTGGCACTCCCAGATTCCCATCTGTGA...TCCCCTGCCACCTGTGCTCACCCTAGCCTTACCCCTCGCTCTACTCCCGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp TCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGTGGCTGGGTGCTCCCTaGACCCCGACCCATAACAAG +
Preference number: 4 (lower is better)
Translates to: SPRIHRGCVSGCVRGTRRWLGAP*TPTHNK
Trigger: CTTGTTATGGGTCGGGGTCCAGGGAGCACCCAGCCA...CCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGAGTGGGCACACAGGGTaGCCACGACGCTGCTCGGAC +
Preference number: 4 (lower is better)
Translates to: IITKDSPRVRERVREGNESGHTG*PRRCSD
Trigger: GTCCGAGCAGCGTCGTGGCCACCCTGTGTGCCCACT...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GAGGGCGGGAGTAGAGCGAGGGGTAAGGCTAGGGTGAGCACAGGTGGCAGGGGAGTGATACACACACAGTaGGGGGAGCCCTCAATCGGG +
Preference number: 4 (lower is better)
Translates to: EGGSRARGKARVSTGGRGVIHTQ*GEPSIG
Trigger: CCCGATTGAGGGCTCCCCCCACTGTGTGTGTATCAC...TCCCCTGCCACCTGTGCTCACCCTAGCCTTACCCCTCGCTCTACTCCCGCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGGTGGCAGGGGACTCTaGTGGGCCTGGACTCTGGTG +
Preference number: 4 (lower is better)
Translates to: IITKDSPRVRERVREGNEGGRGL*WAWTLV
Trigger: CACCAGAGTCCAGGCCCACCAGAGTCCCCTGCCACC...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACACAAACTAAGGGCCTaGGGGAGGCGGGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKHKLRA*GRREGR
Trigger: CCTTCCCTCCCGCCTCCCCCAGGCCCTTAGTTTGTG...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACACTGACTCATGCTGGAACCCTGTaGAAGCGTGGGCTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: PRVRERVREGNEEAQTLTHAGTL*KRGLSQ
Trigger: CTGGGACAGCCCACGCTTCCACAGGGTTCCAGCATG...AGTCAGTGTTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp TCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGAAACCCACACCACCCTaGCCGTCTGGAGCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: SPRIHRGCVSGCVRGTRRKPTPP*PSGACP
Trigger: GGGACAAGCTCCAGACGGCCAGGGTGGTGTGGGTTT...CCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp AAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGTCCGGCGCCCTCTGCTaGGCCAGCAGCCGAAACGCA +
Preference number: 4 (lower is better)
Translates to: KSSPRIHRGCVSGCVRGTSGALC*ASSRNA
Trigger: TGCGTTTCGGCTGCTGGCCCAGCAGAGGGCGCCGGA...CGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGGCTTTTCCTTGGTCTTaGGCGCGTGCGCCCGCTCTT +
Preference number: 4 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGAFPWS*ARAPAL
Trigger: AAGAGCGGGCGCACGCGCTCAAGACCAAGGAAAAGC...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR TCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGATTGGGCCCCAGGAATaGCTCCGGCGTCTTCCGGGT +
Preference number: 4 (lower is better)
Translates to: IITKDSPRVRERVREGNEIGPQE*LRRLPG
Trigger: ACCCGGAAGACGCCGGAGTCATTCCTGGGGCCCAAT...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR TCA 90 bp GAGAGCGACTGTCTCCGTGTGGGCGAGAAGCCTGGAAACGGAGGAACTGGGTTTCGGGAGGCACAGGACTaGGACGGAGCTGGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: ESDCLRVGEKPGNGGTGFREAQD*DGAGSG
Trigger: CCCTGAACCAGCTCCGTCTCAGTCCTGTGCCTCCCG...AAACCCAGTTCCTCCGTTTCCAGGCTTCTCGCCCACACGGAGACAGTCGCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp GAGGGCGGGAGTAGAGCGAGGGGTAAGGCTAGGGTGAGCACAGGTGGCAGGGGAGATTCTTCTCCTCCCTaGACCCCAGTGCACTCTCTG +
Preference number: 4 (lower is better)
Translates to: EGGSRARGKARVSTGGRGDSSPP*TPVHSL
Trigger: CAGAGAGTGCACTGGGGTTCAGGGAGGAGAAGAATC...TCCCCTGCCACCTGTGCTCACCCTAGCCTTACCCCTCGCTCTACTCCCGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAAGGTGAATGGAGGGTCTaGCAAGTGAGGGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKGEWRV*QVRGPG
Trigger: TCCTGGGCCCCTCACTTGTCAGACCCTCCATTCACC...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGGTCAGGAGAATCGCTTaGACCCGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGVRRIA*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCAAGCGATTCTCCTGAC...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp GAGGGCGGGAGTAGAGCGAGGGGTAAGGCTAGGGTGAGCACAGGTGGCAGGGGACTGGTCTCAAACTCCTaGCCTGAGGTAATCCGCCTG +
Preference number: 4 (lower is better)
Translates to: EGGSRARGKARVSTGGRGLVSNS*PEVIRL
Trigger: CAGGCGGATTACCTCAGGTCAGGAGTTTGAGACCAG...TCCCCTGCCACCTGTGCTCACCCTAGCCTTACCCCTCGCTCTACTCCCGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGGAAGGCTGCGGCAGGTaGTGGCAGGTCACCGCATCT +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGEGCGR*WQVTAS
Trigger: AGATGCGGTGACCTGCCAGCACCTGCCGCAGCCTTC...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR GCA 90 bp TCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGATGTTCTCCTTGCACTaGTGCGACACGCGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: SPRIHRGCVSGCVRGTRRMFSLH*CDTRSE
Trigger: CTCGGAGCGCGTGTCGCAGCAGTGCAAGGAGAACAT...CCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR GCA 90 bp TCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGGGCCGTGGCGGTCTGTaGCAGCTTTTCCTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: SPRIHRGCVSGCVRGTRRGRGGL*QLFLGL
Trigger: AAGACCAAGGAAAAGCTGGCACAGACCGCCACGGCC...CCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR GCA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAATCCTCGATTGCCATCTaGAGCCGCAGGTCATCCCCG +
Preference number: 4 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKSSIAI*SRRSSP
Trigger: CGGGGATGACCTGCGGCTGCAGATGGCAATCGAGGA...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR GCA 90 bp TCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTGTTGTGCCATTGGTaGTGGGCTTGGCAGGTGACC +
Preference number: 4 (lower is better)
Translates to: SPRIHRGCVSGCVRGTRRLLCHW*WAWQVT
Trigger: GGTCACCTGCCAAGCCCAGCACCAATGGCACAACAG...CCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR GCA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAAAGGTCGGCAGTGCCGTaGGGAGTCGGTCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKRSAVP*GVGQSQ
Trigger: CTGACTTTGACCGACTCCGCACGGCACTGCCGACCT...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR GCA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGAAGAGCAAGGCCTCCTaGACCGGAAGCGTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGKSKAS*TGSVWP
Trigger: TGGCCAGACGCTTCCGGTGCAGGAGGCCTTGCTCTT...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGTGGCTGGCCCAGAGCTaGCCAGCCAGAGAGAGACCA +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGWLAQS*PARERP
Trigger: TGGTCTCTCTCTGGCTGGGCAGCTCTGGGCCAGCCA...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GAGAGCGACTGTCTCCGTGTGGGCGAGAAGCCTGGAAACGGAGGAACTGGGTTTGTGAGGATCCCAGGCTaGGCCCAGTGGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: ESDCLRVGEKPGNGGTGFVRIPG*AQWLTP
Trigger: AGGCGTGAGCCACTGGGCGCAGCCTGGGATCCTCAC...AAACCCAGTTCCTCCGTTTCCAGGCTTCTCGCCCACACGGAGACAGTCGCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GAGGGCGGGAGTAGAGCGAGGGGTAAGGCTAGGGTGAGCACAGGTGGCAGGGGAGCTCACTGCAGCCTCTaGCTCTGGGTTCAAGCGATT +
Preference number: 4 (lower is better)
Translates to: EGGSRARGKARVSTGGRGAHCSL*LWVQAI
Trigger: AATCGCTTGAACCCAGAGGCAGAGGCTGCAGTGAGC...TCCCCTGCCACCTGTGCTCACCCTAGCCTTACCCCTCGCTCTACTCCCGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp TCCCTGGGACCCACCTCTTCCTGCATGGTGTGGTCAGCAATTCCTCCATCAAGCCCCATGGATCAGGCGTaGGCCCCTCCCCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SLGPTSSCMVWSAIPPSSPMDQA*APPQLQ
Trigger: CTGCAGCTGGGGAGGGGCCCACGCCTGATCCATGGG...GCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGATCGGAACTTCCCCATaGATCAGGCGTGGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGIGTSP*IRRGPL
Trigger: GAGGGGCCCACGCCTGATCCATGGGGAAGTTCCGAT...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGGGACTGAGACGGAGCTaGTTCAGGGTGAGCGTCGCG +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGGLRRS*FRVSVA
Trigger: CGCGACGCTCACCCTGAACCAGCTCCGTCTCAGTCC...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp CTCAATCGGGGACAACAGCAGGCTCCCAGCATTCTCCCAGCGTTCAACCGTGTAAATGGGGCAGCCGGATaGAGCCAGGCCCCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: LNRGQQQAPSILPAFNRVNGAAG*SQAPFR
Trigger: GCGGAAGGGGGCCTGGCTCCATCCGGCTGCCCCATT...TACACGGTTGAACGCTGGGAGAATGCTGGGAGCCTGCTGTTGTCCCCGATTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp TCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGGAAGGGCACTGGGGGTaGGGATCCCCCATTTCACAT +
Preference number: 4 (lower is better)
Translates to: SPRIHRGCVSGCVRGTRREGHWG*GSPISH
Trigger: ATGTGAAATGGGGGATCCCCACCCCCAGTGCCCTTC...CCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGCAACCAGGAGGCGCCTaGTGGTCCACTCAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: IITKDSPRVRERVREGNEQPGGA*WSTQLS
Trigger: GCTGAGCTGAGTGGACCACCAGGCGCCTCCTGGTTG...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGCAACACTCCACTGGCTaGGTGCTCCCTGGACCCCGA +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGQHSTG*VLPGPR
Trigger: TCGGGGTCCAGGGAGCACCCAGCCAGTGGAGTGTTG...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGCCTCCAACACTCCACTaGCTGGGTGCTCCCTGGACC +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGPPTLH*LGAPWT
Trigger: GGTCCAGGGAGCACCCAGCCAGTGGAGTGTTGGAGG...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAAACCCTCCAGACACCCTaGTCTGCAGGGGCAAGTGGA +
Preference number: 4 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKTLQTP*SAGASG
Trigger: TCCACTTGCCCCTGCAGACCAGGGTGTCTGGAGGGT...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACACTTCAGCCCTCTCTaGGGGAAGACGTCGGGTCAG +
Preference number: 4 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKHFSPL*GKTSGQ
Trigger: CTGACCCGACGTCTTCCCCCAGAGAGGGCTGAAGTG...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GAGGGCGGGAGTAGAGCGAGGGGTAAGGCTAGGGTGAGCACAGGTGGCAGGGGACATGCTGGAGTGCAATaGTGCGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: EGGSRARGKARVSTGGRGHAGVQ*CDLGSL
Trigger: CAGTGAGCCGAGATCGCACCATTGCACTCCAGCATG...TCCCCTGCCACCTGTGCTCACCCTAGCCTTACCCCTCGCTCTACTCCCGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGCGTCAGCAAGGTCCATaGGGGACGACTCCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGRQQGP*GTTPPC
Trigger: GCAAGGAGGAGTCGTCCCTCATGGACCTTGCTGACG...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR TCA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGGAAAGAGATGTGACCTaGGCCCTGGGTCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGERDVT*ALGPWM
Trigger: CATCCAGGGACCCAGGGCTCAGGTCACATCTCTTTC...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp TCCCTGGGACCCACCTCTTCCTGCATGGTGTGGTCAGCAATTCCTCCATCAAGCTCAGCCGGCAGAGGCTaGCCCGGCTTTCCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: SLGPTSSCMVWSAIPPSSSAGRG*PGFPGV
Trigger: CACTCCTGGAAAGCCGGGTCAGCCTCTGCCGGCTGA...GCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGCACAGCAGCTCCTGCTaGGCACTTTGGTGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGHSSSC*ALWWLE
Trigger: TTCCAGCCACCAAAGTGCTCAGCAGGAGCTGCTGTG...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAAAATCCTTTCAGCAAATaGACCCCGCCGCCATCCCCC +
Preference number: 4 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKNPFSK*TPPPSP
Trigger: GGGGGATGGCGGCGGGGTTCATTTGCTGAAAGGATT...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGTGGCAGGATGGCGCTTaGGGGATGAGCTGGACAACC +
Preference number: 4 (lower is better)
Translates to: IITKDSPRVRERVREGNEWQDGA*GMSWTT
Trigger: GGTTGTCCAGCTCATCCCTCAAGCGCCATCCTGCCA...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GAGAGCGACTGTCTCCGTGTGGGCGAGAAGCCTGGAAACGGAGGAACTGGGTTTGAAGGCTGCGGCAGGTaGTGGCAGGTCACCGCATCT +
Preference number: 4 (lower is better)
Translates to: ESDCLRVGEKPGNGGTGFEGCGR*WQVTAS
Trigger: AGATGCGGTGACCTGCCAGCACCTGCCGCAGCCTTC...AAACCCAGTTCCTCCGTTTCCAGGCTTCTCGCCCACACGGAGACAGTCGCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp AAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGTTCTCCTTGCACTGCTaGGACACGCGCTCCGAGCCG +
Preference number: 4 (lower is better)
Translates to: KSSPRIHRGCVSGCVRGTFSLHC*DTRSEP
Trigger: CGGCTCGGAGCGCGTGTCGCAGCAGTGCAAGGAGAA...CGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR GCA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGAGCAGGGCCACCAGCTaGTTAGCTTTCTCACGCACG +
Preference number: 4 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGSRATS*LAFSRT
Trigger: CGTGCGTGAGAAAGCTAAGCAGCTGGTGGCCCTGCT...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR GCA 90 bp TCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCCCCAGTCTCCCTCTTaGTCTCCTCGATTGCCATCT +
Preference number: 4 (lower is better)
Translates to: SPRIHRGCVSGCVRGTRRPQSPS*SPRLPS
Trigger: AGATGGCAATCGAGGAGAGCAAGAGGGAGACTGGGG...CCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR GCA 90 bp AAGGTGCCTGGGAATGGGCACAGAAACTCTCCCTCCCCTTTTAGCACACGCAGACCGAGATCGCGCCACTaGACTCCAGCCTGGGGGACG +
Preference number: 4 (lower is better)
Translates to: KVPGNGHRNSPSPFSTRRPRSRH*TPAWGT
Trigger: CGTCCCCCAGGCTGGAGTGCAGTGGCGCGATCTCGG...TCTGCGTGTGCTAAAAGGGGAGGGAGAGTTTCTGTGCCCATTCCCAGGCACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp CCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACACTGACTGCACGCAGGGTTAACTaGTGTAGGGGTTACCCCCAT +
Preference number: 4 (lower is better)
Translates to: PRVRERVREGNEEAQTLTARRVN*CRGYPH
Trigger: ATGGGGGTAACCCCTACAGCAGTTAACCCTGCGTGC...AGTCAGTGTTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACCTCGGTTGATAGTCTaGGCGCTGGCCCAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKPRLIV*ALAQKE
Trigger: TTCCTTCTGGGCCAGCGCGCAGACTATCAACCGAGG...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp AAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGACGAGGTCGACATaGTGCCCGGCTGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: KSSPRIHRGCVSGCVRGTRTRST*CPAAAA
Trigger: TGCTGCTGCAGCCGGGCACCATGTCGACCTCGTCCT...CGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp GTGCTCCAGGGGAGGGGCCATGAGGAGGCTGTAGGTGAAACAGGAGTGGTTCAAAGGACGAGGTCGACATaGTGCCCGGCTGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VLQGRGHEEAVGETGVVQRTRST*CPAAAA
Trigger: TGCTGCTGCAGCCGGGCACCATGTCGACCTCGTCCT...TTGAACCACTCCTGTTTCACCTACAGCCTCCTCATGGCCCCTCCCCTGGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGATCGGAACTTCCCCATaGATCAGGCGTGGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGIGTSP*IRRGPL
Trigger: GAGGGGCCCACGCCTGATCCATGGGGAAGTTCCGAT...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp AAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGCATTGGTGCTGGGCTTaGCAGGTGACCCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: KSSPRIHRGCVSGCVRGTHWCWA*QVTLPR
Trigger: CCTGGGGAGGGTCACCTGCCAAGCCCAGCACCAATG...CGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGCGGCTGTTGTGCCATTaGTGCTGGGCTTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: IITKDSPRVRERVREGNERLLCH*CWAWQV
Trigger: CACCTGCCAAGCCCAGCACCAATGGCACAACAGCCG...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000085079.11
CDS-3UTR CCA 90 bp AAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGCGACGAGGGCTGCATTaGGCCCCAGGAATGACTCCG +
Preference number: 4 (lower is better)
Translates to: KSSPRIHRGCVSGCVRGTRRGLH*APGMTP
Trigger: CGGAGTCATTCCTGGGGCCCAATGCAGCCCTCGTCG...CGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp TCCCTGGGACCCACCTCTTCCTGCATGGTGTGGTCAGCAATTCCTCCATCAAGCGGGGAGAGATGTACGTaGGTGGCGCTCCAGGGACGG +
Preference number: 4 (lower is better)
Translates to: SLGPTSSCMVWSAIPPSSGERCT*VALQGR
Trigger: CCGTCCCTGGAGCGCCACCCACGTACATCTCTCCCC...GCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACCCTGTGGAAGCGTaGGCTGTCCCAGGACGTGCA +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGNPVEA*AVPGRA
Trigger: TGCACGTCCTGGGACAGCCCACGCTTCCACAGGGTT...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAATTTGGAAGGCCGAGGTaGGCAGATCACGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKFGRPR*ADHEVR
Trigger: CCTGACCTCGTGATCTGCCCACCTCGGCCTTCCAAA...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp TCCCTGGGACCCACCTCTTCCTGCATGGTGTGGTCAGCAATTCCTCCATCAAGCGATCAAAGAATGGGGTaGGGGCCCGGCGCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SLGPTSSCMVWSAIPPSSDQRMG*GPGAVA
Trigger: AGCCACCGCGCCGGGCCCCCACCCCATTCTTTGATC...GCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GAGAGCGACTGTCTCCGTGTGGGCGAGAAGCCTGGAAACGGAGGAACTGGGTTTGAAGCTGGAAGCGCGTaGGGGAGATGCCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: ESDCLRVGEKPGNGGTGFEAGSA*GRCLQL
Trigger: CAGCTGCAGGCATCTCCCCCACGCGCTTCCAGCTTC...AAACCCAGTTCCTCCGTTTCCAGGCTTCTCGCCCACACGGAGACAGTCGCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp ACGCAGAAAACCAACGCAGAGCAGCACAAACTAAGGGCCTGGGGGAGGCGGGAGGCGACTGTCTCCGTGTaGGCGAGAAGCCTGGAAACG +
Preference number: 4 (lower is better)
Translates to: TQKTNAEQHKLRAWGRREATVSV*ARSLET
Trigger: CGTTTCCAGGCTTCTCGCCCACACGGAGACAGTCGC...CTCCCGCCTCCCCCAGGCCCTTAGTTTGTGCTGCTCTGCGTTGGTTTTCTGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CAA 72 bp CCTCCAGGGACTCGGGAGAGACACATGCGTGAGCTTTaGCGATACGGGGTGAGACAGCAAGGGTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: PPGTRERHMREL*RYGVRQQGCCG
Trigger: CCCACAGCACCCTTGCTGTCTCACCCCGTATCGCAAAAGCTCACGCATGTGTCTCTCCCGAGTCCCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp CCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCCTTGATCTCCGCCTCTaGGTAGTTGTGGACGATGTT +
Preference number: 4 (lower is better)
Translates to: PRIHRGCVSGCVRGTRRLLDLRL*VVVDDV
Trigger: AACATCGTCCACAACTACTCAGAGGCGGAGATCAAG...GAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR TCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGCAGCCAGAGATCCCCTaGCCCCACTCATGTCAAACG +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGQPEIP*PHSCQT
Trigger: CGTTTGACATGAGTGGGGTCAGGGGATCTCTGGCTG...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR TCA 90 bp AAGGTGCCTGGGAATGGGCACAGAAACTCTCCCTCCCCTTTTAGCACACGCAGAGCTGGAAGGGGTTGGTaGCGGAAGGGCCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KVPGNGHRNSPSPFSTRRAGRGW*RKGQWL
Trigger: CAGCCACTGGCCCTTCCGTCACCAACCCCTTCCAGC...TCTGCGTGTGCTAAAAGGGGAGGGAGAGTTTCTGTGCCCATTCCCAGGCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAAATGCACTCACAACACTaGTCTCCCAGGGAGCCGGAA +
Preference number: 4 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKMHSQH*SPREPE
Trigger: TTCCGGCTCCCTGGGAGATCAGTGTTGTGAGTGCAT...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR TCA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGAGGAGGCTCAAACACTaGCTGGGGGTTGGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGRRLKH*LGVGSL
Trigger: CAAACTCCCAACCCCCAGTCAGTGTTTGAGCCTCCT...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR TCA 90 bp TCCCTGGGACCCACCTCTTCCTGCATGGTGTGGTCAGCAATTCCTCCATCAAGCGGGCGATGGCGACGGTaGCCTGTGTTGCACATGTGC +
Preference number: 4 (lower is better)
Translates to: SLGPTSSCMVWSAIPPSSGRWRR*PVLHMC
Trigger: GCACATGTGCAACACAGGTCACCGTCGCCATCGCCC...GCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp TCCCTGGGACCCACCTCTTCCTGCATGGTGTGGTCAGCAATTCCTCCATCAAGCTCCACCATCCCCAGGTaGCCTCTGATCACCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SLGPTSSCMVWSAIPPSSSTIPR*PLITLA
Trigger: GGCCAGGGTGATCAGAGGTCACCTGGGGATGGTGGA...GCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGCCTTGGGCTGCAGTTTaGGAAACTCCAGGGGCACCT +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGPWAAV*ETPGAP
Trigger: AGGTGCCCCTGGAGTTTCTCAAACTGCAGCCCAAGG...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGAGGCGGAGGTTGCAGTaGGCCAAGATGACACCACTG +
Preference number: 4 (lower is better)
Translates to: IITKDSPRVRERVREGNERRRLQ*AKMTPL
Trigger: CAGTGGTGTCATCTTGGCTCACTGCAACCTCCGCCT...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp GTGCTCCAGGGGAGGGGCCATGAGGAGGCTGTAGGTGAAACAGGAGTGGTTCAACGCGAGAGGTACGTGTaGGAGCGACTGTCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: VLQGRGHEEAVGETGVVQRERYV*ERLSPC
Trigger: ACACGGAGACAGTCGCTCTCACACGTACCTCTCGCG...TTGAACCACTCCTGTTTCACCTACAGCCTCCTCATGGCCCCTCCCCTGGAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAAGGAGAGACACATGCGTaGGCTTTTGCGATACGGGGT +
Preference number: 4 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKGETHA*AFAIRG
Trigger: ACCCCGTATCGCAAAAGCTCACGCATGTGTCTCTCC...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp AAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGTCCTCGATTGCCATCTaGAGCCGCAGGTCATCCCCG +
Preference number: 4 (lower is better)
Translates to: KSSPRIHRGCVSGCVRGTSSIAI*SRRSSP
Trigger: CGGGGATGACCTGCGGCTGCAGATGGCAATCGAGGA...CGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR GCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGCTTGCTCTCCTCGATTaGCATCTGCAGCCGCAGGTC +
Preference number: 4 (lower is better)
Translates to: IITKDSPRVRERVREGNELALLD*HLQPQV
Trigger: GACCTGCGGCTGCAGATGGCAATCGAGGAGAGCAAG...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR GCA 90 bp GTGCTCCAGGGGAGGGGCCATGAGGAGGCTGTAGGTGAAACAGGAGTGGTTCAAAGGTCGGCAGTGCCGTaGGGAGTCGGTCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: VLQGRGHEEAVGETGVVQRSAVP*GVGQSQ
Trigger: CTGACTTTGACCGACTCCGCACGGCACTGCCGACCT...TTGAACCACTCCTGTTTCACCTACAGCCTCCTCATGGCCCCTCCCCTGGAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp AAGGTGCCTGGGAATGGGCACAGAAACTCTCCCTCCCCTTTTAGCACACGCAGAGGGTGGCCACGACGCTaGTCGGACACCGCAGTCATG +
Preference number: 4 (lower is better)
Translates to: KVPGNGHRNSPSPFSTRRGWPRR*SDTAVM
Trigger: CATGACTGCGGTGTCCGAGCAGCGTCGTGGCCACCC...TCTGCGTGTGCTAAAAGGGGAGGGAGAGTTTCTGTGCCCATTCCCAGGCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp AAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGCGTAAGGGACGCTTaGTGCTGCCTGGGGACAGCA +
Preference number: 4 (lower is better)
Translates to: KSSPRIHRGCVSGCVRGTSVRDA*CCLGTA
Trigger: TGCTGTCCCCAGGCAGCAGCAAGCGTCCCTTACGCT...CGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGGCGGCTGCAAGAAGGTaGCTGGGAATGGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGAAARR*LGMGTE
Trigger: TTCTGTGCCCATTCCCAGGCACCTTCTTGCAGCCGC...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp CTCAATCGGGGACAACAGCAGGCTCCCAGCATTCTCCCAGCGTTCAACCGTGTAACGTGCCGTCTAGTGTaGGCGCTGGGCTGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: LNRGQQQAPSILPAFNRVTCRLV*ALGWKV
Trigger: CACCTTCCAGCCCAGCGCGCACACTAGACGGCACGT...TACACGGTTGAACGCTGGGAGAATGCTGGGAGCCTGCTGTTGTCCCCGATTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGTTCTGGGCTCCCTGGTaGCTCCCACGTGCATGTGTA +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGFWAPW*LPRACV
Trigger: TACACATGCACGTGGGAGGCACCAGGGAGCCCAGAA...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGCCCGGCCTCCCAAACTaGTGGAATTACAGGCTCACG +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGPGLPN*WNYRLT
Trigger: CGTGAGCCTGTAATTCCAGCAGTTTGGGAGGCCGGG...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGCTGCTGATGAGGCCGTaGCGGTCTGTGCCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGLLMRP*RSVPAF
Trigger: AAAAGCTGGCACAGACCGCCACGGCCTCATCAGCAG...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGCTGCTGATGAGGCCGTaGCGGTCTGTGCCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: IITKDSPRVRERVREGNELLMRP*RSVPAF
Trigger: AAAAGCTGGCACAGACCGCCACGGCCTCATCAGCAG...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp TCCCTGGGACCCACCTCTTCCTGCATGGTGTGGTCAGCAATTCCTCCATCAAGCCATTGGTGCTGGGCTTaGCAGGTGACCCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SLGPTSSCMVWSAIPPSSHWCWA*QVTLPR
Trigger: CCTGGGGAGGGTCACCTGCCAAGCCCAGCACCAATG...GCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGTTGTGCCATTGGTGCTaGGCTTGGCAGGTGACCCTC +
Preference number: 4 (lower is better)
Translates to: IITKDSPRVRERVREGNELCHWC*AWQVTL
Trigger: GAGGGTCACCTGCCAAGCCCAGCACCAATGGCACAA...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp CTCAATCGGGGACAACAGCAGGCTCCCAGCATTCTCCCAGCGTTCAACCGTGTAAGAGATGTACGTGGGTaGCGCTCCAGGGACGGGAGG +
Preference number: 4 (lower is better)
Translates to: LNRGQQQAPSILPAFNRVRDVRG*RSRDGR
Trigger: CCTCCCGTCCCTGGAGCGCCACCCACGTACATCTCT...TACACGGTTGAACGCTGGGAGAATGCTGGGAGCCTGCTGTTGTCCCCGATTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGGGCTCAAACACTGACTaGGGGTTGGGAGTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGGSNTD*GLGVWR
Trigger: CCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGAGCCATCCCTTGACCTaGGAGGGTCAGGGAAATCAG +
Preference number: 4 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGSHPLT*EGQGNQ
Trigger: CTGATTTCCCTGACCCTCCCAGGTCAAGGGATGGCT...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GTGCTCCAGGGGAGGGGCCATGAGGAGGCTGTAGGTGAAACAGGAGTGGTTCAAAGGGCTTCCCCTCCCTaGCTAAGCAAGGGGGATGCT +
Preference number: 4 (lower is better)
Translates to: VLQGRGHEEAVGETGVVQRASPP*LSKGDA
Trigger: AGCATCCCCCTTGCTTAGCCAGGGAGGGGAAGCCCT...TTGAACCACTCCTGTTTCACCTACAGCCTCCTCATGGCCCCTCCCCTGGAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp AAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGCGGCGGAAAGCATGCTaGAACCCTGTGGAAGCGTGG +
Preference number: 4 (lower is better)
Translates to: KSSPRIHRGCVSGCVRGTRRKAC*NPVEAW
Trigger: CCACGCTTCCACAGGGTTCCAGCATGCTTTCCGCCG...CGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAGCATCTTGATAAGATaGGAACCAGGGAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: PRIHRGCVSGCVRGTRRLSILIR*EPGSPQ
Trigger: CTGAGGGCTCCCTGGTTCCCATCTTATCAAGATGCT...GAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp AAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGCCCTCCATTTATGGCTaGCCCAGAGCTGCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: KSSPRIHRGCVSGCVRGTPSIYG*PRAAQP
Trigger: TGGCTGGGCAGCTCTGGGCCAGCCATAAATGGAGGG...CGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp TCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTTTTTGGCTCAGTCTaGAGGGCAGTGGTGCCATCA +
Preference number: 4 (lower is better)
Translates to: SPRIHRGCVSGCVRGTRRLFGSV*RAVVPS
Trigger: TGATGGCACCACTGCCCTCCAGACTGAGCCAAAAAG...CCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAATTTCCTTGGCCACAGTaGGACCTTCACCTGGCACCT +
Preference number: 4 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKFPWPQ*DLHLAP
Trigger: AGGTGCCAGGTGAAGGTCCCACTGTGGCCAAGGAAA...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CAA 72 bp CGGGACCTGGCCACTCCTGGACGTGATGCCCTAAGCTaGCCTCCCCTGCGGATGGATGTAGTGATGCTTGAT +
Preference number: 4 (lower is better)
Translates to: RDLATPGRDALS*PPLRMDVVMLD
Trigger: ATCAAGCATCACTACATCCATCCGCAGGGGAGGCAAGCTTAGGGCATCACGTCCAGGAGTGGCCAGGTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGTGTCTGGCCCCACCCTaGGCCCAGAGCGTCCCCCGG +
Preference number: 4 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGCLAPP*AQSVPR
Trigger: CCGGGGGACGCTCTGGGCTCAGGGTGGGGCCAGACA...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp AAGGTGCCTGGGAATGGGCACAGAAACTCTCCCTCCCCTTTTAGCACACGCAGACCAACCCCTAGGCCCTaGACAGAGTCGAGACCCAGG +
Preference number: 4 (lower is better)
Translates to: KVPGNGHRNSPSPFSTRRPTPRP*TESRPR
Trigger: CCTGGGTCTCGACTCTGTTCAGGGCCTAGGGGTTGG...TCTGCGTGTGCTAAAAGGGGAGGGAGAGTTTCTGTGCCCATTCCCAGGCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp GAGAGCGACTGTCTCCGTGTGGGCGAGAAGCCTGGAAACGGAGGAACTGGGTTTGGCACGAGAATTGCTTaGACCTGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: ESDCLRVGEKPGNGGTGFGTRIA*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGCAATTCTCGTGCC...AAACCCAGTTCCTCCGTTTCCAGGCTTCTCGCCCACACGGAGACAGTCGCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGGGTTTCCAGGTGGTCTaGACTGAAGAGCTGGCTATG +
Preference number: 4 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGGFQVV*TEELAM
Trigger: CATAGCCAGCTCTTCAGTTCAGACCACCTGGAAACC...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GGCTTGAGTAGCACATTCACTGTGTGGCAGAACTGCGAGTCTGCCCAGGCTTTTGACATGGTGCCCGGCTaGAGCAGCAAGGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: GLSSTFTVWQNCESAQAFDMVPG*SSKGHR
Trigger: CCTGTGCCCCTTGCTGCTGCAGCCGGGCACCATGTC...AAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGCGTACATGTTCTCCTTaGACTGCTGCGACACGCGCT +
Preference number: 4 (lower is better)
Translates to: IITKDSPRVRERVREGNERTCSP*TAATRA
Trigger: AGCGCGTGTCGCAGCAGTGCAAGGAGAACATGTACG...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR GCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGCCCCAGTCTCCCTCTTaGTCTCCTCGATTGCCATCT +
Preference number: 4 (lower is better)
Translates to: IITKDSPRVRERVREGNEPQSPS*SPRLPS
Trigger: AGATGGCAATCGAGGAGAGCAAGAGGGAGACTGGGG...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR GCA 90 bp TCCCTGGGACCCACCTCTTCCTGCATGGTGTGGTCAGCAATTCCTCCATCAAGCTGGATTAGTGATGCTTaGGGTGGGCCCGGGCGATGG +
Preference number: 4 (lower is better)
Translates to: SLGPTSSCMVWSAIPPSSWISDA*GGPGRW
Trigger: CCATCGCCCGGGCCCACCGCAAGCATCACTAATCCA...GCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAAGGACCCACCTCTTCCTaGATGGTGTGGTCAGCAATT +
Preference number: 4 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKGPTSS*MVWSAI
Trigger: AATTGCTGACCACACCATGCAGGAAGAGGTGGGTCC...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GTGCTCCAGGGGAGGGGCCATGAGGAGGCTGTAGGTGAAACAGGAGTGGTTCAAACAGGAGGCGGAGCTTaGAGTGAGCAGAGATCGAGC +
Preference number: 4 (lower is better)
Translates to: VLQGRGHEEAVGETGVVQTGGGA*SEQRSS
Trigger: GCTCGATCTCTGCTCACTGCAAGCTCCGCCTCCTGT...TTGAACCACTCCTGTTTCACCTACAGCCTCCTCATGGCCCCTCCCCTGGAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp ACGCAGAAAACCAACGCAGAGCAGCACAAACTAAGGGCCTGGGGGAGGCGGGAGCTGAGGCACGAGAATTaGTTGAACCTGGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: TQKTNAEQHKLRAWGRRELRHEN*LNLGGG
Trigger: TCCGCCTCCCAGGTTCAAGCAATTCTCGTGCCTCAG...CTCCCGCCTCCCCCAGGCCCTTAGTTTGTGCTGCTCTGCGTTGGTTTTCTGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp CCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACACTGACTCACAAACGAAGGGCCTaGCTGCAGGATCAAAGAATG +
Preference number: 4 (lower is better)
Translates to: PRVRERVREGNEEAQTLTHKRRA*LQDQRM
Trigger: CATTCTTTGATCCTGCAGGCAGGCCCTTCGTTTGTG...AGTCAGTGTTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp AAGGTGCCTGGGAATGGGCACAGAAACTCTCCCTCCCCTTTTAGCACACGCAGACGTGGGGGAGATGCCTaGAGCTGCACGAAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: KVPGNGHRNSPSPFSTRRRGGDA*SCTKVP
Trigger: AGGCACCTTCGTGCAGCTGCAGGCATCTCCCCCACG...TCTGCGTGTGCTAAAAGGGGAGGGAGAGTTTCTGTGCCCATTCCCAGGCACCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp CCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACACTGACTAAAACAGTACGCCACTaGATTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: PRVRERVREGNEEAQTLTKTVRH*IPAWVT
Trigger: TGTCACCCAGGCTGGAATGCAGTGGCGTACTGTTTT...AGTCAGTGTTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGACGATGTTCTTCATCTaGCGCCTCAAGGACGAGGTC +
Preference number: 4 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGTMFFI*RLKDEV
Trigger: GACCTCGTCCTTGAGGCGCCAGATGAAGAACATCGT...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp AAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGTTGTGCCATTGGTGCTaGGCTTGGCAGGTGACCCTC +
Preference number: 4 (lower is better)
Translates to: KSSPRIHRGCVSGCVRGTLCHWC*AWQVTL
Trigger: GAGGGTCACCTGCCAAGCCCAGCACCAATGGCACAA...CGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp AAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGGGCCCCCTTCCGCCCTaGATTATAGGAGGAAGGGAT +
Preference number: 4 (lower is better)
Translates to: KSSPRIHRGCVSGCVRGTGPLPP*IIGGRD
Trigger: ATCCCTTCCTCCTATAATCCAGGGCGGAAGGGGGCC...CGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGGCTCAAACACTGACTaGGGGTTGGGAGTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: IITKDSPRVRERVREGNEGSNTD*GLGVWR
Trigger: CCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CCA 90 bp GGCTTGAGTAGCACATTCACTGTGTGGCAGAACTGCGAGTCTGCCCAGGCTTTTGCGTCTGGCCATGAGTaGCCTCCCGACCACCTGGAC +
Preference number: 4 (lower is better)
Translates to: GLSSTFTVWQNCESAQAFASGHE*PPDHLD
Trigger: GTCCAGGTGGTCGGGAGGCCACTCATGGCCAGACGC...AAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp ACGCAGAAAACCAACGCAGAGCAGCACAAACTAAGGGCCTGGGGGAGGCGGGAGGAGGGAGACTCCACATaGAAGAACAGCCTGTTCGGC +
Preference number: 4 (lower is better)
Translates to: TQKTNAEQHKLRAWGRREEGDST*KNSLFG
Trigger: GCCGAACAGGCTGTTCTTCCATGTGGAGTCTCCCTC...CTCCCGCCTCCCCCAGGCCCTTAGTTTGTGCTGCTCTGCGTTGGTTTTCTGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGCCACCTCTTCCTGCATaGTGTGGTCAGCAATTCCTC +
Preference number: 4 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGPPLPA*CGQQFL
Trigger: GAGGAATTGCTGACCACACCATGCAGGAAGAGGTGG...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CTCAATCGGGGACAACAGCAGGCTCCCAGCATTCTCCCAGCGTTCAACCGTGTAGGTGCTTGGGCCTCATaGGGGACTCCTACACAGCAG +
Preference number: 4 (lower is better)
Translates to: LNRGQQQAPSILPAFNRVGAWAS*GTPTQQ
Trigger: CTGCTGTGTAGGAGTCCCCCATGAGGCCCAAGCACC...TACACGGTTGAACGCTGGGAGAATGCTGGGAGCCTGCTGTTGTCCCCGATTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACTGCAAGAAGGTGCCTaGGAATGGGCACAGAAACTC +
Preference number: 4 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKLQEGA*EWAQKL
Trigger: GAGTTTCTGTGCCCATTCCCAGGCACCTTCTTGCAG...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGGAAGGTGCCTGGGAATaGGCACAGAAACACTCCCTC +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGEGAWE*AQKHSL
Trigger: GAGGGAGTGTTTCTGTGCCCATTCCCAGGCACCTTC...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGTGTGGGCGAGAAGCCTaGAAACGGAGGAACTGGGTT +
Preference number: 4 (lower is better)
Translates to: IITKDSPRVRERVREGNECGREA*KRRNWV
Trigger: AACCCAGTTCCTCCGTTTCCAGGCTTCTCGCCCACA...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp TCCCTGGGACCCACCTCTTCCTGCATGGTGTGGTCAGCAATTCCTCCATCAAGCGGGGTCGGTGCAGGGTaGGGGGTAGGGTTTCAACAT +
Preference number: 4 (lower is better)
Translates to: SLGPTSSCMVWSAIPPSSGVGAG*GVGFQH
Trigger: ATGTTGAAACCCTACCCCCCACCCTGCACCGACCCC...GCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAAAGCACATTCACTGTGTaGCAGAACTGCGAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKSTFTV*QNCESA
Trigger: GGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCT...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GAGAGCGACTGTCTCCGTGTGGGCGAGAAGCCTGGAAACGGAGGAACTGGGTTTTGCAGCCTCTGCCTCTaGGTTCAAGCGATTCTCCCG +
Preference number: 4 (lower is better)
Translates to: ESDCLRVGEKPGNGGTGFCSLCL*VQAILP
Trigger: CGGGAGAATCGCTTGAACCCAGAGGCAGAGGCTGCA...AAACCCAGTTCCTCCGTTTCCAGGCTTCTCGCCCACACGGAGACAGTCGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGTTTCCCAGGCTGGTCTaGTACTCCTGGCTTCAAGTG +
Preference number: 4 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGFPRLV*YSWLQV
Trigger: CACTTGAAGCCAGGAGTACCAGACCAGCCTGGGAAA...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAATCAGGGTCTGCTTTTTaGCTCAGTCTGGAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKSGSAF*LSLEGS
Trigger: ACTGCCCTCCAGACTGAGCCAAAAAGCAGACCCTGA...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCTTGTGGACCTACTCTTaGATCTCTTGGCACACTCCT +
Preference number: 4 (lower is better)
Translates to: PRIHRGCVSGCVRGTRRLLWTYS*ISWHTP
Trigger: AGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCACAA...GAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GAGGGCGGGAGTAGAGCGAGGGGTAAGGCTAGGGTGAGCACAGGTGGCAGGGGAAGTGGGACCTTCACCTaGCACCTCTATCCTGTAATT +
Preference number: 4 (lower is better)
Translates to: EGGSRARGKARVSTGGRGSGTFT*HLYPVI
Trigger: AATTACAGGATAGAGGTGCCAGGTGAAGGTCCCACT...TCCCCTGCCACCTGTGCTCACCCTAGCCTTACCCCTCGCTCTACTCCCGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACTTGATCTCCGCCTCTaGGTAGTTGTGGACGATGTT +
Preference number: 4 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKLDLRL*VVVDDV
Trigger: AACATCGTCCACAACTACTCAGAGGCGGAGATCAAG...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR TCA 90 bp AAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACACTaGCTGGGGGTTGGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: KSSPRIHRGCVSGCVRGTRRLKH*LGVGSL
Trigger: CAAACTCCCAACCCCCAGTCAGTGTTTGAGCCTCCT...CGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR TCA 90 bp TCCCTGGGACCCACCTCTTCCTGCATGGTGTGGTCAGCAATTCCTCCATCAAGCGGAAATCAGGGCTTCTaGGACAGAGGGGCTGGTTGC +
Preference number: 4 (lower is better)
Translates to: SLGPTSSCMVWSAIPPSSGNQGF*DRGAGC
Trigger: GCAACCAGCCCCTCTGTCTCAGAAGCCCTGATTTCC...GCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp GAGAGCGACTGTCTCCGTGTGGGCGAGAAGCCTGGAAACGGAGGAACTGGGTTTCCTTTCATTCCCCTCTaGGCACGCAGGGTTAACTGC +
Preference number: 4 (lower is better)
Translates to: ESDCLRVGEKPGNGGTGFPFIPL*ARRVNC
Trigger: GCAGTTAACCCTGCGTGCTCAGAGGGGAATGAAAGG...AAACCCAGTTCCTCCGTTTCCAGGCTTCTCGCCCACACGGAGACAGTCGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp TCCCTGGGACCCACCTCTTCCTGCATGGTGTGGTCAGCAATTCCTCCATCAAGCCCCAGGGAACAGAAATaGAGTGGGGCCAGGCCATCT +
Preference number: 4 (lower is better)
Translates to: SLGPTSSCMVWSAIPPSSPREQK*SGARPS
Trigger: AGATGGCCTGGCCCCACTTCATTTCTGTTCCCTGGG...GCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGCTGGTCTCGAACTCCTaGCCTCAAGTCATCCATTCG +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGLVSNS*PQVIHS
Trigger: CGAATGGATGACTTGAGGTCAGGAGTTCGAGACCAG...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp ACGCAGAAAACCAACGCAGAGCAGCACAAACTAAGGGCCTGGGGGAGGCGGGAGCCAGGTGGTCTGAACTaGAGAGCTGGCTATGTCTGT +
Preference number: 4 (lower is better)
Translates to: TQKTNAEQHKLRAWGRREPGGLN*RAGYVC
Trigger: ACAGACATAGCCAGCTCTTCAGTTCAGACCACCTGG...CTCCCGCCTCCCCCAGGCCCTTAGTTTGTGCTGCTCTGCGTTGGTTTTCTGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GGCTTGAGTAGCACATTCACTGTGTGGCAGAACTGCGAGTCTGCCCAGGCTTTTACGAGGTCGACATGGTaGCCGGCTGCAGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: GLSSTFTVWQNCESAQAFTRSTW*PAAAAR
Trigger: CCTTGCTGCTGCAGCCGGGCACCATGTCGACCTCGT...AAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp TCCCTGGGACCCACCTCTTCCTGCATGGTGTGGTCAGCAATTCCTCCATCAAGCAGCAGGGCCACCAGCTaGTTAGCTTTCTCACGCACG +
Preference number: 4 (lower is better)
Translates to: SLGPTSSCMVWSAIPPSSSRATS*LAFSRT
Trigger: CGTGCGTGAGAAAGCTAAGCAGCTGGTGGCCCTGCT...GCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp TCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCGCTCCTCCTTATCATaGTCTTCTCGGCTCAAACTA +
Preference number: 4 (lower is better)
Translates to: SPRIHRGCVSGCVRGTRRRSSLS*SSRLKL
Trigger: TAGTTTGAGCCGAGAAGAGCATGATAAGGAGGAGCG...CCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGGTGCAGGCTCCGCAGTaGGAAATCGTGAAACTTATC +
Preference number: 4 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGVQAPQ*EIVKLI
Trigger: GATAAGTTTCACGATTTCGCACTGCGGAGCCTGCAC...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp ACGCAGAAAACCAACGCAGAGCAGCACAAACTAAGGGCCTGGGGGAGGCGGGAGGGGACACTCGGTCTCTaGCACACTCAATGTCACCAT +
Preference number: 4 (lower is better)
Translates to: TQKTNAEQHKLRAWGRREGTLGL*HTQCHH
Trigger: ATGGTGACATTGAGTGTGGCAGAGACCGAGTGTCCC...CTCCCGCCTCCCCCAGGCCCTTAGTTTGTGCTGCTCTGCGTTGGTTTTCTGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGCAGGCCTTAGACCCCTaGCACATACAAGCAATCACC +
Preference number: 4 (lower is better)
Translates to: IITKDSPRVRERVREGNEQALDP*HIQAIT
Trigger: GGTGATTGCTTGTATGTGGCAGGGGTCTAAGGCCTG...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGTTGTCCATGCTGGAGTaGAATGGTGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGLSMLE*NGAISA
Trigger: AGCCGAGATCGCACCATTGCACTCCAGCATGGACAA...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp CCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCTCTAAGAAAGGGTCTTaGTCTGTTGTCCATGCTGGA +
Preference number: 4 (lower is better)
Translates to: PRIHRGCVSGCVRGTRRLSKKGS*SVVHAG
Trigger: TCCAGCATGGACAACAGAGCAAGACCCTTTCTTAGA...GAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGGCCATCATAGCTCACTaGAGCCTTGAACTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGAIIAH*SLELLG
Trigger: ACCCAGGAGTTCAAGGCTGCAGTGAGCTATGATGGC...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp ATGCTTGGGAAGTGGATGAGAACAGCATTCAGCCAGAGATGCTTGGGAAGTGGACAGGGCCCCGATGCGTaGAGAGATGGGGCGACTCCC +
Preference number: 4 (lower is better)
Translates to: MLGKWMRTAFSQRCLGSGQGPDA*RDGATP
Trigger: GGGAGTCGCCCCATCTCTCCACGCATCGGGGCCCTG...TCCACTTCCCAAGCATCTCTGGCTGAATGCTGTTCTCATCCACTTCCCAAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp TCCCTGGGACCCACCTCTTCCTGCATGGTGTGGTCAGCAATTCCTCCATCAAGCGAAGGGCACTGGGGGTaGGGATCCCCCATTTCACAT +
Preference number: 4 (lower is better)
Translates to: SLGPTSSCMVWSAIPPSSEGHWG*GSPISH
Trigger: ATGTGAAATGGGGGATCCCCACCCCCAGTGCCCTTC...GCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GAGAGCGACTGTCTCCGTGTGGGCGAGAAGCCTGGAAACGGAGGAACTGGGTTTAAGTTCCTGTGTCCCTaGGACCCACCTCTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: ESDCLRVGEKPGNGGTGFKFLCP*DPPLPA
Trigger: TGCAGGAAGAGGTGGGTCCCAGGGACACAGGAACTT...AAACCCAGTTCCTCCGTTTCCAGGCTTCTCGCCCACACGGAGACAGTCGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp AAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGGAAGGTGCCTGGGAATaGGCACAGAAACTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: KSSPRIHRGCVSGCVRGTEGAWE*AQKLSL
Trigger: GAGGGAGAGTTTCTGTGCCCATTCCCAGGCACCTTC...CGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAAGACACCATTGTGTaGGGGATTCCAGTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: PRIHRGCVSGCVRGTRRLKDTIV*GIPVER
Trigger: TCTTTCCACTGGAATCCCCCACACAATGGTGTCTTT...GAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp AAGGTGCCTGGGAATGGGCACAGAAACTCTCCCTCCCCTTTTAGCACACGCAGATCACCCCAGCACCTCTaGGACAAGAGCTGTCGGAGT +
Preference number: 4 (lower is better)
Translates to: KVPGNGHRNSPSPFSTRRSPQHL*DKSCRS
Trigger: ACTCCGACAGCTCTTGTCTCAGAGGTGCTGGGGTGA...TCTGCGTGTGCTAAAAGGGGAGGGAGAGTTTCTGTGCCCATTCCCAGGCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp GGCTTGAGTAGCACATTCACTGTGTGGCAGAACTGCGAGTCTGCCCAGGCTTTTGGGGCACCTGTGATGTaGGTAGGCCGGTTTCTCACC +
Preference number: 4 (lower is better)
Translates to: GLSSTFTVWQNCESAQAFGAPVM*VGRFLT
Trigger: GGTGAGAAACCGGCCTACTCACATCACAGGTGCCCC...AAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp TCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGGGATGTAGTGATGCTTaGTTTGGGTGGATGAGAACA +
Preference number: 4 (lower is better)
Translates to: SPRIHRGCVSGCVRGTRRGCSDA*FGWMRT
Trigger: TGTTCTCATCCACCCAAATCAAGCATCACTACATCC...CCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGAATGTCAGCTCCTTCTaGGAACTGCTGGGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: IITKDSPRVRERVREGNENVSSF*ELLGSE
Trigger: TTCTGACCCCAGCAGTTCTCAGAAGGAGCTGACATT...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTAGGCACAGGGCCCCGATaGGTGGAGAGATGGGGCGAC +
Preference number: 4 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILGTGPR*VERWGD
Trigger: GTCGCCCCATCTCTCCACGCATCGGGGCCCTGTGCC...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp CCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACACTGACTCAAGCCCGTGGGAATTaGCATTTATTCCCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: PRVRERVREGNEEAQTLTQARGN*HLFPKL
Trigger: CAACTTTGGGAATAAATGGCAATTCCCACGGGCTTG...AGTCAGTGTTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR GCA 90 bp TCCCTGGGACCCACCTCTTCCTGCATGGTGTGGTCAGCAATTCCTCCATCAAGCCTGATCACCCTGGCCTaGCTTCAGCAAGAATCCTGC +
Preference number: 4 (lower is better)
Translates to: SLGPTSSCMVWSAIPPSSLITLA*LQQESC
Trigger: GCAGGATTCTTGCTGAAGGCAGGCCAGGGTGATCAG...GCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTCGCCAGCCCTCCCACTaGAAACCCACACCACCCTGG +
Preference number: 4 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLRQPSH*KPTPPW
Trigger: CCAGGGTGGTGTGGGTTTGCAGTGGGAGGGCTGGCG...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GAGGGCGGGAGTAGAGCGAGGGGTAAGGCTAGGGTGAGCACAGGTGGCAGGGGATGCCTATTAAACTCCTaGTCCAAATCTCACTCTGTG +
Preference number: 4 (lower is better)
Translates to: EGGSRARGKARVSTGGRGCLLNS*SKSHSV
Trigger: CACAGAGTGAGATTTGGAGCAGGAGTTTAATAGGCA...TCCCCTGCCACCTGTGCTCACCCTAGCCTTACCCCTCGCTCTACTCCCGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GTGCTCCAGGGGAGGGGCCATGAGGAGGCTGTAGGTGAAACAGGAGTGGTTCAAAACGAAGGGCCTGCCTaGAGGATCAAAGAATGGGGT +
Preference number: 4 (lower is better)
Translates to: VLQGRGHEEAVGETGVVQNEGPA*RIKEWG
Trigger: ACCCCATTCTTTGATCCTGCAGGCAGGCCCTTCGTT...TTGAACCACTCCTGTTTCACCTACAGCCTCCTCATGGCCCCTCCCCTGGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp CCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACACTGACTAAGCAGCTTAGAAATTaGTCCCTTTCTCACCACACC +
Preference number: 4 (lower is better)
Translates to: PRVRERVREGNEEAQTLTKQLRN*SLSHHT
Trigger: GGTGTGGTGAGAAAGGGAGCAATTTCTAAGCTGCTT...AGTCAGTGTTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp AAGGTGCCTGGGAATGGGCACAGAAACTCTCCCTCCCCTTTTAGCACACGCAGACCGGGAGGCAGAGGTTaGAGTGAGCCGAAATCACAC +
Preference number: 4 (lower is better)
Translates to: KVPGNGHRNSPSPFSTRRPGGRG*SEPKSH
Trigger: GTGTGATTTCGGCTCACTGCAACCTCTGCCTCCCGG...TCTGCGTGTGCTAAAAGGGGAGGGAGAGTTTCTGTGCCCATTCCCAGGCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp AAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGCTCGGGAGAGACACATaGGTGAGCTTTTGCGATACG +
Preference number: 4 (lower is better)
Translates to: KSSPRIHRGCVSGCVRGTLGRDT*VSFCDT
Trigger: CGTATCGCAAAAGCTCACGCATGTGTCTCTCCCGAG...CGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GAGGGCGGGAGTAGAGCGAGGGGTAAGGCTAGGGTGAGCACAGGTGGCAGGGGAAGGCATCTGCCATCATaGCCGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: EGGSRARGKARVSTGGRGRHLPS*PANFCI
Trigger: AATACAAAAATTAGCCGGGCATGATGGCAGATGCCT...TCCCCTGCCACCTGTGCTCACCCTAGCCTTACCCCTCGCTCTACTCCCGCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp TCCCTGGGACCCACCTCTTCCTGCATGGTGTGGTCAGCAATTCCTCCATCAAGCTCTGGAGGGCAGTGGTaGCATCATAGCTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: SLGPTSSCMVWSAIPPSSSGGQW*HHSSLQ
Trigger: CTGCAGTGAGCTATGATGGCACCACTGCCCTCCAGA...GCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp TTCATGTGGCTGTCAGGACATGTTTCAAGCACCGAGTCCAGCATCTTGATAAGACCTCACGCCGGGCTCTaGGGGGTCATGGCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: FMWLSGHVSSTESSILIRPHAGL*GVMAVS
Trigger: GCTGACCGCCATGACCCCCCAGAGCCCGGCGTGAGG...TCTTATCAAGATGCTGGACTCGGTGCTTGAAACATGTCCTGACAGCCACATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGTCTCTGACCTCATCCTaGTGTCCCCTCAACACAAGA +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGSLTSS*CPLNTR
Trigger: TCTTGTGTTGAGGGGACACCAGGATGAGGTCAGAGA...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTACCAGGAGGCGCCTGGTaGTCCACTCAGCTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILPGGAW*STQLSR
Trigger: CCGGCTGAGCTGAGTGGACCACCAGGCGCCTCCTGG...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp AAGGTGCCTGGGAATGGGCACAGAAACTCTCCCTCCCCTTTTAGCACACGCAGACTCGCCATCCCACTGTaGGGAGAGAGACACATCTGC +
Preference number: 4 (lower is better)
Translates to: KVPGNGHRNSPSPFSTRRLAIPL*GERHIC
Trigger: GCAGATGTGTCTCTCTCCCCACAGTGGGATGGCGAG...TCTGCGTGTGCTAAAAGGGGAGGGAGAGTTTCTGTGCCCATTCCCAGGCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp AAGGTGCCTGGGAATGGGCACAGAAACTCTCCCTCCCCTTTTAGCACACGCAGACAAGGCCTCTCTCCTTaGCTCCCAGACGGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: KVPGNGHRNSPSPFSTRRQGLSP*LPDGCL
Trigger: AAGACAGCCGTCTGGGAGCCAAGGAGAGAGGCCTTG...TCTGCGTGTGCTAAAAGGGGAGGGAGAGTTTCTGTGCCCATTCCCAGGCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp AAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGGGAACAGAAATGAAGTaGGGCCAGGCCATCTCCTGT +
Preference number: 4 (lower is better)
Translates to: KSSPRIHRGCVSGCVRGTGTEMK*GQAISC
Trigger: ACAGGAGATGGCCTGGCCCCACTTCATTTCTGTTCC...CGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GAGAGCGACTGTCTCCGTGTGGGCGAGAAGCCTGGAAACGGAGGAACTGGGTTTTGCTATGCAGACCTCTaGCTTCCCATCCAGCATACC +
Preference number: 4 (lower is better)
Translates to: ESDCLRVGEKPGNGGTGFCYADL*LPIQHT
Trigger: GGTATGCTGGATGGGAAGCCAGAGGTCTGCATAGCA...AAACCCAGTTCCTCCGTTTCCAGGCTTCTCGCCCACACGGAGACAGTCGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGTTTGCCACGGCCATGTaGGTGAGAATCTTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGFATAM*VRILCV
Trigger: CACACACAAGATTCTCACCCACATGGCCGTGGCAAA...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACACTGACTCTCTTGGCACACTCCTaGATTCTTTGGATATTTGGG +
Preference number: 4 (lower is better)
Translates to: PRVRERVREGNEEAQTLTLLAHS*ILWIFG
Trigger: CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAG...AGTCAGTGTTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCTACTCTTGGATCTCTTaGCACACTCCTGGATTCTTT +
Preference number: 4 (lower is better)
Translates to: PRIHRGCVSGCVRGTRRLYSWIS*HTPGFF
Trigger: AAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTA...GAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CAA 72 bp CAGCGTTCAACCGTGTATGTCACTAAGCTCAGGTGCTaGGGCCTCATGGGGGACTCCTACACAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QRSTVYVTKLRC*GLMGDSYTAAP
Trigger: AGGAGCTGCTGTGTAGGAGTCCCCCATGAGGCCCAAGCACCTGAGCTTAGTGACATACACGGTTGAACGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTATACCCAGGCCGGGTGTaGGAAGAGGGCTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILYPGRV*EEGFPS
Trigger: GGAGGGGAAGCCCTCTTCTCACACCCGGCCTGGGTA...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTACCCAGGAGCTCGGATaGAGCTCCTACGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLTQELG*SSYGLQ
Trigger: CTGGAGCCCGTAGGAGCTTCATCCGAGCTCCTGGGT...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTACTCTGGTGGGCGGGGTaGCCCAGGAGCTCGGATGAA +
Preference number: 4 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILLWWAG*PRSSDE
Trigger: TTCATCCGAGCTCCTGGGTCACCCCGCCCACCAGAG...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTAGGGGTAAGGCTAGGGTaGGCACAGGTGGCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILGVRLG*AQVAGD
Trigger: GTCCCCTGCCACCTGTGCTCACCCTAGCCTTACCCC...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp TCCCTGGGACCCACCTCTTCCTGCATGGTGTGGTCAGCAATTCCTCCATCAAGCAGCTATCTCCTTGGTTaGGGGCACTTCCCACTTAGG +
Preference number: 4 (lower is better)
Translates to: SLGPTSSCMVWSAIPPSSSYLLG*GHFPLR
Trigger: CCTAAGTGGGAAGTGCCCTCAACCAAGGAGATAGCT...GCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp AAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGTGCTTGGGAAGTGGATaGGAACAGCATTCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: KSSPRIHRGCVSGCVRGTCLGSG*EQHSAR
Trigger: TCTGGCTGAATGCTGTTCTCATCCACTTCCCAAGCA...CGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGTCAAGAATCCCATGGTaGGCTATGATCACACACTGC +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGSRIPW*AMITHC
Trigger: GCAGTGTGTGATCATAGCTCACCATGGGATTCTTGA...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTGGGACGACTCCTCCTTaGCCCCAGTCTCCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLGTTPP*PQSPSC
Trigger: GCAAGAGGGAGACTGGGGGCAAGGAGGAGTCGTCCC...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GTGCTCCAGGGGAGGGGCCATGAGGAGGCTGTAGGTGAAACAGGAGTGGTTCAAGCTAAGCAAGGGGGATaGTCCTCTGCAACTGAATCT +
Preference number: 4 (lower is better)
Translates to: VLQGRGHEEAVGETGVVQAKQGG*SSATES
Trigger: AGATTCAGTTGCAGAGGAGCATCCCCCTTGCTTAGC...TTGAACCACTCCTGTTTCACCTACAGCCTCCTCATGGCCCCTCCCCTGGAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp CCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCGTCTATAGTTTTGTGTaGTTCAAGATGTCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: PRIHRGCVSGCVRGTRRLVYSFV*FKMSLR
Trigger: TCTGAGGGACATCTTGAAGCACACAAAACTATAGAC...GAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGACGGATCACTTGCGATaGTTATTTCCCAGGGAACAG +
Preference number: 4 (lower is better)
Translates to: IITKDSPRVRERVREGNETDHLR*LFPREQ
Trigger: CTGTTCCCTGGGAAATAAGCATCGCAAGTGATCCGT...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp TCCCTGGGACCCACCTCTTCCTGCATGGTGTGGTCAGCAATTCCTCCATCAAGCATCTCCCCATCTCCCTaGAGTCAGCAGCTATCGGTA +
Preference number: 4 (lower is better)
Translates to: SLGPTSSCMVWSAIPPSSISPSP*SQQLSV
Trigger: TACCGATAGCTGCTGACTGCAGGGAGATGGGGAGAT...GCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGCTCTCTTTCCTGCAATaGTGCAATCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: IITKDSPRVRERVREGNELSFLQ*CNLGSL
Trigger: CAGTGAGCCAAGATTGCAGCATTGCAGGAAAGAGAG...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp ACGCAGAAAACCAACGCAGAGCAGCACAAACTAAGGGCCTGGGGGAGGCGGGAGCATGCTGATTGTCTTTaGCTCGGTCCTATATCCCCT +
Preference number: 4 (lower is better)
Translates to: TQKTNAEQHKLRAWGRREHADCL*LGPISP
Trigger: AGGGGATATAGGACCGAGGCAAAGACAATCAGCATG...CTCCCGCCTCCCCCAGGCCCTTAGTTTGTGCTGCTCTGCGTTGGTTTTCTGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp TCCCTGGGACCCACCTCTTCCTGCATGGTGTGGTCAGCAATTCCTCCATCAAGCGGAGTGCCAAGCCCGTaGGAATTGCCATTTATTCCC +
Preference number: 4 (lower is better)
Translates to: SLGPTSSCMVWSAIPPSSGVPSP*ELPFIP
Trigger: GGGAATAAATGGCAATTCCCACGGGCTTGGCACTCC...GCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGCTGAGACAGAGGGGCTaGTTGCCAGCCACCCCCGAG +
Preference number: 4 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGLRQRG*LPATPE
Trigger: CTCGGGGGTGGCTGGCAACCAGCCCCTCTGTCTCAG...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGGGCCTCCCGACCACCTaGACCTGTGTGGGCTACAGC +
Preference number: 4 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGGLPTT*TCVGYS
Trigger: GCTGTAGCCCACACAGGTCCAGGTGGTCGGGAGGCC...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp ATGCTTGGGAAGTGGATGAGAACAGCATTCAGCCAGAGATGCTTGGGAAGTGGACCATCCCTGAGGCCCTaGCTGTGGGGCCTGCAACAA +
Preference number: 4 (lower is better)
Translates to: MLGKWMRTAFSQRCLGSGPSLRP*LWGLQQ
Trigger: TTGTTGCAGGCCCCACAGCCAGGGCCTCAGGGATGG...TCCACTTCCCAAGCATCTCTGGCTGAATGCTGTTCTCATCCACTTCCCAAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GGCTTGAGTAGCACATTCACTGTGTGGCAGAACTGCGAGTCTGCCCAGGCTTTTCTAAGCTCAGGTGCTTaGGCCTCATGGGGGACTCCT +
Preference number: 4 (lower is better)
Translates to: GLSSTFTVWQNCESAQAFLSSGA*ASWGTP
Trigger: AGGAGTCCCCCATGAGGCCCAAGCACCTGAGCTTAG...AAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTATCTGGCCGGACGCAATaGCTCACGCCACACCCGGGA +
Preference number: 4 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILSGRTQ*LTPHPG
Trigger: TCCCGGGTGTGGCGTGAGCCATTGCGTCCGGCCAGA...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGGTGCAGAAGCAGCCGTaGCTGCACTCTAATAAAACA +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGVQKQP*LHSNKT
Trigger: TGTTTTATTAGAGTGCAGCCACGGCTGCTTCTGCAC...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GAGAGCGACTGTCTCCGTGTGGGCGAGAAGCCTGGAAACGGAGGAACTGGGTTTAAAATGAGTTGGCTGTaGTCGCACGCACCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: ESDCLRVGEKPGNGGTGFKMSWL*SHAPVV
Trigger: GACTACAGGTGCGTGCGACCACAGCCAACTCATTTT...AAACCCAGTTCCTCCGTTTCCAGGCTTCTCGCCCACACGGAGACAGTCGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp TCCCTGGGACCCACCTCTTCCTGCATGGTGTGGTCAGCAATTCCTCCATCAAGCCCTTCTGAGAACTGCTaGGGTCAGAATAGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: SLGPTSSCMVWSAIPPSSPSENC*GQNSPG
Trigger: TCCCGGACTATTCTGACCCCAGCAGTTCTCAGAAGG...GCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTGCTTTTCCTTGGTCTTaGGCGCGTGCGCCCGCTCTT +
Preference number: 4 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLAFPWS*ARAPAL
Trigger: AAGAGCGGGCGCACGCGCTCAAGACCAAGGAAAAGC...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGGAAGAGGGTGTAGTGTaGGTGGGCCCCAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGEEGVV*VGPRKG
Trigger: CCCCTTCCTGGGGCCCACTCACACTACACCCTCTTC...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp TCCCTGGGACCCACCTCTTCCTGCATGGTGTGGTCAGCAATTCCTCCATCAAGCCTCCGACACAGGTCATaGCCCAATTCACAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: SLGPTSSCMVWSAIPPSSLRHRS*PNSQQE
Trigger: TTCTTGCTGTGAATTGGGTCATGACCTGTGTCGGAG...GCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp GGCTTGAGTAGCACATTCACTGTGTGGCAGAACTGCGAGTCTGCCCAGGCTTTTATGCTCCTCTGCAACTaGATCTGGAACCGGCTGACC +
Preference number: 4 (lower is better)
Translates to: GLSSTFTVWQNCESAQAFMLLCN*IWNRLT
Trigger: GGTCAGCCGGTTCCAGATTCAGTTGCAGAGGAGCAT...AAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGCTCTGTTTTGCCAAATaGGGAAATGGTGGGGAGAAT +
Preference number: 4 (lower is better)
Translates to: IITKDSPRVRERVREGNELCFAK*GNGGEN
Trigger: ATTCTCCCCACCATTTCCTCATTTGGCAAAACAGAG...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp CCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCTTTCTTCCTATTCAATaGGAACATGAGGAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: PRIHRGCVSGCVRGTRRLFLPIQ*EHEEKA
Trigger: TGCCTTTTCCTCATGTTCTCATTGAATAGGAAGAAA...GAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp GGCTTGAGTAGCACATTCACTGTGTGGCAGAACTGCGAGTCTGCCCAGGCTTTTTTTTGCGATACGGGGTaGGACAGCAAGGGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: GLSSTFTVWQNCESAQAFFCDTG*DSKGAV
Trigger: CACAGCACCCTTGCTGTCTCACCCCGTATCGCAAAA...AAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCC
54% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp AAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGTGCTTGGGAAGTGGATaGTGTCTACCATTCTACGGA +
Preference number: 4 (lower is better)
Translates to: KSSPRIHRGCVSGCVRGTCLGSG*CLPFYG
Trigger: TCCGTAGAATGGTAGACATCATCCACTTCCCAAGCA...CGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp AAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGGCCACAATGTCAGTATaGCTGTTGAAGAACCTGACC +
Preference number: 4 (lower is better)
Translates to: KSSPRIHRGCVSGCVRGTATMSV*LLKNLT
Trigger: GGTCAGGTTCTTCAACAGTCATACTGACATTGTGGC...CGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp CTCAATCGGGGACAACAGCAGGCTCCCAGCATTCTCCCAGCGTTCAACCGTGTATGTGTGGGCCTCATTTaGTGCTCAGTCAAGATGGGA +
Preference number: 4 (lower is better)
Translates to: LNRGQQQAPSILPAFNRVCVGLI*CSVKMG
Trigger: TCCCATCTTGACTGAGCATCAAATGAGGCCCACACA...TACACGGTTGAACGCTGGGAGAATGCTGGGAGCCTGCTGTTGTCCCCGATTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTCCACGGCCATGTGGGTaGGAATCTTGTGTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLPRPCG*ESCVWA
Trigger: GGCCCACACACAAGATTCTCACCCACATGGCCGTGG...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp ACGCAGAAAACCAACGCAGAGCAGCACAAACTAAGGGCCTGGGGGAGGCGGGAGCAATCCGGATACTTCTaGCACAGAAGTGATGCTAGA +
Preference number: 4 (lower is better)
Translates to: TQKTNAEQHKLRAWGRREQSGYF*HRSDAR
Trigger: TCTAGCATCACTTCTGTGTCAGAAGTATCCGGATTG...CTCCCGCCTCCCCCAGGCCCTTAGTTTGTGCTGCTCTGCGTTGGTTTTCTGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp ACGCAGAAAACCAACGCAGAGCAGCACAAACTAAGGGCCTGGGGGAGGCGGGAGATGTGCCAGGGCATATaGACATCAGATGAATGGAAG +
Preference number: 4 (lower is better)
Translates to: TQKTNAEQHKLRAWGRREMCQGI*TSDEWK
Trigger: CTTCCATTCATCTGATGTTCATATGCCCTGGCACAT...CTCCCGCCTCCCCCAGGCCCTTAGTTTGTGCTGCTCTGCGTTGGTTTTCTGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp ACGCAGAAAACCAACGCAGAGCAGCACAAACTAAGGGCCTGGGGGAGGCGGGAGCAAGCCCGTGGGAATTaGCATTTATTCCCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: TQKTNAEQHKLRAWGRREQARGN*HLFPKL
Trigger: CAACTTTGGGAATAAATGGCAATTCCCACGGGCTTG...CTCCCGCCTCCCCCAGGCCCTTAGTTTGTGCTGCTCTGCGTTGGTTTTCTGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGGTAAGGGACGCTTGCTaGTGCCTGGGGACAGCACCC +
Preference number: 4 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGVRDAC*CLGTAP
Trigger: GGGTGCTGTCCCCAGGCAGCAGCAAGCGTCCCTTAC...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTAGATCCCACCCAGAGCTaGCGCCTTCAGCTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILDPTQS*RLQLAL
Trigger: GAGAGCCAGCTGAAGGCGGCAGCTCTGGGTGGGATC...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAAACACGAGATCTGTGGTaGTACTTTGTAATTCGCACT +
Preference number: 4 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKTRDLW*YFVIRT
Trigger: AGTGCGAATTACAAAGTAGCACCACAGATCTCGTGT...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGATTCTACGGATCACTTaGGATGCTTATTTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: IITKDSPRVRERVREGNEILRIT*DAYFPG
Trigger: CCCTGGGAAATAAGCATCGCAAGTGATCCGTAGAAT...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GGCTTGAGTAGCACATTCACTGTGTGGCAGAACTGCGAGTCTGCCCAGGCTTTTTCATGTCCCTCTCAGTaGCCTCCAACACTCCACTGG +
Preference number: 4 (lower is better)
Translates to: GLSSTFTVWQNCESAQAFSCPSQ*PPTLHW
Trigger: CCAGTGGAGTGTTGGAGGCCACTGAGAGGGACATGA...AAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAAATAAAACATTTCTaGCCGGACGCAATGGCTCAC +
Preference number: 4 (lower is better)
Translates to: IITKDSPRVRERVREGNEEIKHF*PDAMAH
Trigger: GTGAGCCATTGCGTCCGGCCAGAAATGTTTTATTTC...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp AAGGTGCCTGGGAATGGGCACAGAAACTCTCCCTCCCCTTTTAGCACACGCAGACTATGTTTCCCAGGCTaGTCTGGTACTCCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: KVPGNGHRNSPSPFSTRRLCFPG*SGTPGF
Trigger: GAAGCCAGGAGTACCAGACCAGCCTGGGAAACATAG...TCTGCGTGTGCTAAAAGGGGAGGGAGAGTTTCTGTGCCCATTCCCAGGCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GAGAGCGACTGTCTCCGTGTGGGCGAGAAGCCTGGAAACGGAGGAACTGGGTTTTATGGAAGAACAGAATaGCATTGGCCAGAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: ESDCLRVGEKPGNGGTGFYGRTE*HWPESP
Trigger: TGGGGACTCTGGCCAATGCCATTCTGTTCTTCCATA...AAACCCAGTTCCTCCGTTTCCAGGCTTCTCGCCCACACGGAGACAGTCGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCGATGCTCAGTCAAGATaGGAAAGATATTATGGAAGA +
Preference number: 4 (lower is better)
Translates to: PRIHRGCVSGCVRGTRRLDAQSR*ERYYGR
Trigger: TCTTCCATAATATCTTTCCCATCTTGACTGAGCATC...GAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp ACGCAGAAAACCAACGCAGAGCAGCACAAACTAAGGGCCTGGGGGAGGCGGGAGAACTTTAAAGAATGCTaGCATAGGCCAGGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: TQKTNAEQHKLRAWGRRENFKEC*HRPGVV
Trigger: CACCACTCCTGGCCTATGCCAGCATTCTTTAAAGTT...CTCCCGCCTCCCCCAGGCCCTTAGTTTGTGCTGCTCTGCGTTGGTTTTCTGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAATTATCCTTAATTTGGTaGATGGAGGGTCTGACAAGT +
Preference number: 4 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKLSLIW*MEGLTS
Trigger: ACTTGTCAGACCCTCCATTCACCAAATTAAGGATAA...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGCGCAGTGCGAAATCGTaGAACTTATCCTTAATTTGG +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGRSAKS*NLSLIW
Trigger: CCAAATTAAGGATAAGTTTCACGATTTCGCACTGCG...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTAGGTTTCTCACCACAGTaGAGGGCCTGGCAGGATGGC +
Preference number: 4 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILGFSPQ*RAWQDG
Trigger: GCCATCCTGCCAGGCCCTTCACTGTGGTGAGAAACC...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp TCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGAAGAACCTGACCTTATaGTTGACATGTCATTTTCTC +
Preference number: 4 (lower is better)
Translates to: SPRIHRGCVSGCVRGTRRKNLTL*LTCHFL
Trigger: GAGAAAATGACATGTCAATCATAAGGTCAGGTTCTT...CCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGTGTGGGGGAGATGCCTaGGGCTGCAAGAAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGCGGDA*GCKKVP
Trigger: AGGCACCTTCTTGCAGCCGCAGGCATCTCCCCCACA...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp TTCATGTGGCTGTCAGGACATGTTTCAAGCACCGAGTCCAGCATCTTGATAAGAAGCGTGGAGAGCACGTaGCGTCTAGTGTGCGCGCTG +
Preference number: 4 (lower is better)
Translates to: FMWLSGHVSSTESSILIRSVEST*RLVCAL
Trigger: CAGCGCGCACACTAGACGGCACGTGCTCTCCACGCT...TCTTATCAAGATGCTGGACTCGGTGCTTGAAACATGTCCTGACAGCCACATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp ACGCAGAAAACCAACGCAGAGCAGCACAAACTAAGGGCCTGGGGGAGGCGGGAGGATCACACACTGCAATaGAGCTTTAGTGATAGAGCA +
Preference number: 4 (lower is better)
Translates to: TQKTNAEQHKLRAWGRREDHTLQ*SFSDRA
Trigger: TGCTCTATCACTAAAGCTGCATTGCAGTGTGTGATC...CTCCCGCCTCCCCCAGGCCCTTAGTTTGTGCTGCTCTGCGTTGGTTTTCTGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp AAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGTTTAGAGTCAGGGTCTaGTTTTTGGCTCAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: KSSPRIHRGCVSGCVRGTFRVRV*FLAQSG
Trigger: TCCAGACTGAGCCAAAAAGCAGACCCTGACTCTAAA...CGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGGTGCTCGCACTTACTTaGTTAATTTTACTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGVLALT*LILLPG
Trigger: ACCTGGAAGTAAAATTAAGCAAGTAAGTGCGAGCAC...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTAAAACTAAGGGCCAGCTaGAGCTGGGCGTCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILKLRAS*SWASSS
Trigger: CGAGGACGACGCCCAGCTCCAGCTGGCCCTTAGTTT...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GGCTTGAGTAGCACATTCACTGTGTGGCAGAACTGCGAGTCTGCCCAGGCTTTTCCAGGAGTGCAGGGATaGATTAGTGATGCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: GLSSTFTVWQNCESAQAFPGVQG*ISDACG
Trigger: ACCGCAAGCATCACTAATCCATCCCTGCACTCCTGG...AAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp ATGCTTGGGAAGTGGATGAGAACAGCATTCAGCCAGAGATGCTTGGGAAGTGGATGTGATGTAGCTGTCTaGCCCCACCCTGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: MLGKWMRTAFSQRCLGSGCDVAV*PHPEPR
Trigger: TCTGGGCTCAGGGTGGGGCCAGACAGCTACATCACA...TCCACTTCCCAAGCATCTCTGGCTGAATGCTGTTCTCATCCACTTCCCAAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGAAGGGCCTGGCAGGATaGCGCTTGAGGGATGAGCTG +
Preference number: 4 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGKGLAG*RLRDEL
Trigger: CAGCTCATCCCTCAAGCGCCATCCTGCCAGGCCCTT...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGCTAACCCTTTTCATGTaGCTGTCAGGACATGTTTCA +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGLTLFM*LSGHVS
Trigger: TGAAACATGTCCTGACAGCCACATGAAAAGGGTTAG...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTAAAGGTGCTGCAGGGTTaGCTTCCGCCAAGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILKVLQG*LPPRPL
Trigger: GAGAGGCCTTGGCGGAAGCCAACCCTGCAGCACCTT...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTTTCTTCTGGGCTCCCTaGTGCCTCCCACGTGCATGT +
Preference number: 4 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLFFWAP*CLPRAC
Trigger: ACATGCACGTGGGAGGCACCAGGGAGCCCAGAAGAA...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp AAGGTGCCTGGGAATGGGCACAGAAACTCTCCCTCCCCTTTTAGCACACGCAGACTCTGTTGTCCATGCTaGAGTGCAATGGTGCGATCT +
Preference number: 4 (lower is better)
Translates to: KVPGNGHRNSPSPFSTRRLCCPC*SAMVRS
Trigger: AGATCGCACCATTGCACTCCAGCATGGACAACAGAG...TCTGCGTGTGCTAAAAGGGGAGGGAGAGTTTCTGTGCCCATTCCCAGGCACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGTGGGCAGGTTGTAAATaGAAGAGGCTGAATATTGGT +
Preference number: 4 (lower is better)
Translates to: IITKDSPRVRERVREGNEWAGCK*KRLNIG
Trigger: ACCAATATTCAGCCTCTTCCATTTACAACCTGCCCA...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp GAGAGCGACTGTCTCCGTGTGGGCGAGAAGCCTGGAAACGGAGGAACTGGGTTTTGGTTCAAATGTAAATaGTGGCTGAACACGAGTGAG +
Preference number: 4 (lower is better)
Translates to: ESDCLRVGEKPGNGGTGFWFKCK*WLNTSE
Trigger: CTCACTCGTGTTCAGCCATCATTTACATTTGAACCA...AAACCCAGTTCCTCCGTTTCCAGGCTTCTCGCCCACACGGAGACAGTCGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGACAGCCCGGCTCCCCGTaGCATCGGGACCTGGCCACT +
Preference number: 4 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRQPGSP*HRDLAT
Trigger: AGTGGCCAGGTCCCGATGTCACGGGGAGCCGGGCTG...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTAATGTTCTCCTTGCACTaGTGCGACACGCGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILMFSLH*CDTRSE
Trigger: CTCGGAGCGCGTGTCGCAGCAGTGCAAGGAGAACAT...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGCTTGCTCTCCTCGATTaGCATCTGCAGCCGCAGGTC +
Preference number: 4 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGLALLD*HLQPQV
Trigger: GACCTGCGGCTGCAGATGGCAATCGAGGAGAGCAAG...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp TTCATGTGGCTGTCAGGACATGTTTCAAGCACCGAGTCCAGCATCTTGATAAGACCTGGCTGTGGGGCCTaGAACAAGCTGTCACCTAGC +
Preference number: 4 (lower is better)
Translates to: FMWLSGHVSSTESSILIRPGCGA*NKLSPS
Trigger: GCTAGGTGACAGCTTGTTGCAGGCCCCACAGCCAGG...TCTTATCAAGATGCTGGACTCGGTGCTTGAAACATGTCCTGACAGCCACATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTAGCAGCTGCACGAAGGTaGCTGGGAATGGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILAAARR*LGMGTE
Trigger: TTCTGTGCCCATTCCCAGGCACCTTCGTGCAGCTGC...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp AAGGTGCCTGGGAATGGGCACAGAAACTCTCCCTCCCCTTTTAGCACACGCAGATCTTCCTGCATGGTGTaGTCAGCAATTCCTCCATCA +
Preference number: 4 (lower is better)
Translates to: KVPGNGHRNSPSPFSTRRSSCMV*SAIPPS
Trigger: TGATGGAGGAATTGCTGACCACACCATGCAGGAAGA...TCTGCGTGTGCTAAAAGGGGAGGGAGAGTTTCTGTGCCCATTCCCAGGCACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp TTCATGTGGCTGTCAGGACATGTTTCAAGCACCGAGTCCAGCATCTTGATAAGACGTGACATCGGGACCTaGCCACTCCTGGACGTGATG +
Preference number: 4 (lower is better)
Translates to: FMWLSGHVSSTESSILIRRDIGT*PLLDVM
Trigger: CATCACGTCCAGGAGTGGCCAGGTCCCGATGTCACG...TCTTATCAAGATGCTGGACTCGGTGCTTGAAACATGTCCTGACAGCCACATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GGCTTGAGTAGCACATTCACTGTGTGGCAGAACTGCGAGTCTGCCCAGGCTTTTTGGAAACGGAGGAACTaGGTTTCCGAGGGACTGAAT +
Preference number: 4 (lower is better)
Translates to: GLSSTFTVWQNCESAQAFWKRRN*VSEGLN
Trigger: ATTCAGTCCCTCGGAAACCCAGTTCCTCCGTTTCCA...AAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTAGGAGAGAGATGTAGGTaGCAGGACCCTCCAGGGACT +
Preference number: 4 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILGERCR*QDPPGT
Trigger: AGTCCCTGGAGGGTCCTGCCACCTACATCTCTCTCC...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTAGTAATTCCAGCACTTTaGGAGGTCCACGCGGGCGGA +
Preference number: 4 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILVIPAL*EVHAGG
Trigger: TCCGCCCGCGTGGACCTCCCAAAGTGCTGGAATTAC...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGATGCACTCACAACACTaGTCTCCCAGGGAGCCGGAA +
Preference number: 4 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGMHSQH*SPREPE
Trigger: TTCCGGCTCCCTGGGAGATCAGTGTTGTGAGTGCAT...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTAAACCCCCGGACCCCTaGGGTTTGCTCTTAGTGATT +
Preference number: 4 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLKPPDP*GLLLVI
Trigger: AATCACTAAGAGCAAACCTCAGGGGTCCGGGGGTTT...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp AAGGTGCCTGGGAATGGGCACAGAAACTCTCCCTCCCCTTTTAGCACACGCAGACTAAAAACAGAAAAATaGGTTGGCTGTGGTCGCACG +
Preference number: 4 (lower is better)
Translates to: KVPGNGHRNSPSPFSTRRLKTEK*VGCGRT
Trigger: CGTGCGACCACAGCCAACTCATTTTTCTGTTTTTAG...TCTGCGTGTGCTAAAAGGGGAGGGAGAGTTTCTGTGCCCATTCCCAGGCACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTAATGGCTGAACACGAGTaGGGCATTTGCAGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILMAEHE*GICRGG
Trigger: ACCACCCCTGCAAATGCCTCACTCGTGTTCAGCCAT...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGCGGGACCCGTCTCTGTaGCAGAGCTGTTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGRDPSL*QSCFFL
Trigger: AAGGAAGAAACAGCTCTGTCACAGAGACGGGTCCCG...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGTATGATTATGGAGTGTaGTTCAGTGTACATGCTGAT +
Preference number: 4 (lower is better)
Translates to: AKIITKDSPRVRERVREGYDYGV*FSVHAD
Trigger: ATCAGCATGTACACTGAATCACACTCCATAATCATA...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp ATGCTTGGGAAGTGGATGAGAACAGCATTCAGCCAGAGATGCTTGGGAAGTGGAGACGGTGACCTGTGTTaGACATGTGCCATCTCTCAG +
Preference number: 4 (lower is better)
Translates to: MLGKWMRTAFSQRCLGSGDGDLC*TCAISQ
Trigger: CTGAGAGATGGCACATGTGCAACACAGGTCACCGTC...TCCACTTCCCAAGCATCTCTGGCTGAATGCTGTTCTCATCCACTTCCCAAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp TTCATGTGGCTGTCAGGACATGTTTCAAGCACCGAGTCCAGCATCTTGATAAGATCTCGGCGGAAAGCATaGTGGAACCCTGTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: FMWLSGHVSSTESSILIRSRRKA*WNPVEA
Trigger: CGCTTCCACAGGGTTCCAGCATGCTTTCCGCCGAGA...TCTTATCAAGATGCTGGACTCGGTGCTTGAAACATGTCCTGACAGCCACATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp ATGCTTGGGAAGTGGATGAGAACAGCATTCAGCCAGAGATGCTTGGGAAGTGGAGCTCCTTCTGAGAACTaGTGGGGTCAGAATAGTCCG +
Preference number: 4 (lower is better)
Translates to: MLGKWMRTAFSQRCLGSGAPSEN*WGQNSP
Trigger: CGGACTATTCTGACCCCAGCAGTTCTCAGAAGGAGC...TCCACTTCCCAAGCATCTCTGGCTGAATGCTGTTCTCATCCACTTCCCAAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp ATGCTTGGGAAGTGGATGAGAACAGCATTCAGCCAGAGATGCTTGGGAAGTGGAGCTAGTGACAGTGACTaGAGGTGTCTAAGCGGAGAG +
Preference number: 4 (lower is better)
Translates to: MLGKWMRTAFSQRCLGSGASDSD*RCLSGE
Trigger: CTCTCCGCTTAGACACCTGCAGTCACTGTCACTAGC...TCCACTTCCCAAGCATCTCTGGCTGAATGCTGTTCTCATCCACTTCCCAAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GGCTTGAGTAGCACATTCACTGTGTGGCAGAACTGCGAGTCTGCCCAGGCTTTTTTCAGCCTCTCAAACTaGTGGGATTACAGGCACAAG +
Preference number: 4 (lower is better)
Translates to: GLSSTFTVWQNCESAQAFFSLSN*WDYRHK
Trigger: CTTGTGCCTGTAATCCCAGCAGTTTGAGAGGCTGAA...AAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTGCTTTTCATTTCTTCTaGGCTCCCTGGTGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLAFHFF*APWCLP
Trigger: TGGGAGGCACCAGGGAGCCCAGAAGAAATGAAAAGC...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTAGGCCTCCCAAACTGCTaGAATTACAGGCTCACGCCA +
Preference number: 4 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILGLPNC*NYRLTP
Trigger: TGGCGTGAGCCTGTAATTCCAGCAGTTTGGGAGGCC...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CTCAATCGGGGACAACAGCAGGCTCCCAGCATTCTCCCAGCGTTCAACCGTGTATTGTTCCCCAACCAATaGACATTCTATGGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: LNRGQQQAPSILPAFNRVLFPNQ*TFYGPF
Trigger: AAAGGGACCATAGAATGTCCATTGGTTGGGGAACAA...TACACGGTTGAACGCTGGGAGAATGCTGGGAGCCTGCTGTTGTCCCCGATTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTAAGAACAGAATGGCATTaGCCAGAGTCCCCACCCCAG +
Preference number: 4 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILRTEWH*PESPPQ
Trigger: CTGGGGTGGGGACTCTGGCCAATGCCATTCTGTTCT...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GAGAGCGACTGTCTCCGTGTGGGCGAGAAGCCTGGAAACGGAGGAACTGGGTTTATTTCACATGGACCTTaGATTGACGAGGAATACAAG +
Preference number: 4 (lower is better)
Translates to: ESDCLRVGEKPGNGGTGFISHGP*IDEEYK
Trigger: CTTGTATTCCTCGTCAATCCAAGGTCCATGTGAAAT...AAACCCAGTTCCTCCGTTTCCAGGCTTCTCGCCCACACGGAGACAGTCGCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTAGGGTTTCCGAGGGACTaGATACCTCGGTTGATAGTC +
Preference number: 4 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILGFPRD*IPRLIV
Trigger: GACTATCAACCGAGGTATTCAGTCCCTCGGAAACCC...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp ATGCTTGGGAAGTGGATGAGAACAGCATTCAGCCAGAGATGCTTGGGAAGTGGACCTACGGTAAATTGCTaGTGCCTTATTGGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: MLGKWMRTAFSQRCLGSGPTVNC*CLIGLV
Trigger: GACCAGGCCAATAAGGCATCAGCAATTTACCGTAGG...TCCACTTCCCAAGCATCTCTGGCTGAATGCTGTTCTCATCCACTTCCCAAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGACCCGGAGGTCGGCAGTaGCGTGCGGAGTCGGTCAAA +
Preference number: 4 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRPGGRQ*RAESVK
Trigger: TTTGACCGACTCCGCACGGCACTGCCGACCTCCGGG...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGAGGTGCATGCCACTATaGATGACTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: IITKDSPRVRERVREGNERCMPL*MTNFCI
Trigger: AATACAAAAATTAGTCATGCATAGTGGCATGCACCT...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGAAGAACCAAGGAGTTTaGCACGGCCATGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGKNQGV*HGHVGE
Trigger: CTCACCCACATGGCCGTGGCAAACTCCTTGGTTCTT...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGTGGATGAAGGGGCTCTaGGGGACACACGAAATCACA +
Preference number: 4 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGWMKGL*GTHEIT
Trigger: TGTGATTTCGTGTGTCCCCCAGAGCCCCTTCATCCA...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGGGAGCTATGACCCTGTaGGGAGACCAAGATTGGCAA +
Preference number: 4 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGGAMTL*GDQDWQ
Trigger: TTGCCAATCTTGGTCTCCCCACAGGGTCATAGCTCC...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTACAGCAGCTATCTCCTTaGTTGAGGGCACTTCCCACT +
Preference number: 4 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILQQLSP*LRALPT
Trigger: AGTGGGAAGTGCCCTCAACCAAGGAGATAGCTGCTG...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp TTCATGTGGCTGTCAGGACATGTTTCAAGCACCGAGTCCAGCATCTTGATAAGACACTGCATTCCAGCCTaGGTGACAGAGCGAAACACG +
Preference number: 4 (lower is better)
Translates to: FMWLSGHVSSTESSILIRHCIPA*VTERNT
Trigger: CGTGTTTCGCTCTGTCACCCAGGCTGGAATGCAGTG...TCTTATCAAGATGCTGGACTCGGTGCTTGAAACATGTCCTGACAGCCACATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CAA 72 bp TTTACAAAAGCAAGCAGCCAATCCTTGGGCTGCAGTTaGAGAAACTCCAGGGGCACCTGTGATGTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: FTKASSQSLGCS*RNSRGTCDVSR
Trigger: CCTACTCACATCACAGGTGCCCCTGGAGTTTCTCAAACTGCAGCCCAAGGATTGGCTGCTTGCTTTTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGAATTGGGCCCCAGGAATaGCTCCGGCGTCTTCCGGGT +
Preference number: 4 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRIGPQE*LRRLPG
Trigger: ACCCGGAAGACGCCGGAGTCATTCCTGGGGCCCAAT...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTATCCCATGGTGAGCTATaGTCACACACTGCAATGCAG +
Preference number: 4 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILSHGEL*SHTAMQ
Trigger: CTGCATTGCAGTGTGTGATCATAGCTCACCATGGGA...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp CTCAATCGGGGACAACAGCAGGCTCCCAGCATTCTCCCAGCGTTCAACCGTGTACATATGAACATCAGATaGATGGAAGTTATCCTGTGT +
Preference number: 4 (lower is better)
Translates to: LNRGQQQAPSILPAFNRVHMNIR*MEVILC
Trigger: ACACAGGATAACTTCCATTCATCTGATGTTCATATG...TACACGGTTGAACGCTGGGAGAATGCTGGGAGCCTGCTGTTGTCCCCGATTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTACACGAAATCACAGATaGGAATCTGGGAGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLTRNHR*ESGSAK
Trigger: CTTGGCACTCCCAGATTCCCATCTGTGATTTCGTGT...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTAGTCCCCATTTCCTCCTaGGAAATGACTCTCCCACAA +
Preference number: 4 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILVPISS*EMTLPQ
Trigger: TTGTGGGAGAGTCATTTCCCAGGAGGAAATGGGGAC...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTAAAATTAGCTGGGCATaGTGGTGGGCATCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLKISWA*WWASVV
Trigger: GACTACAGATGCCCACCACCATGCCCAGCTAATTTT...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp ATGCTTGGGAAGTGGATGAGAACAGCATTCAGCCAGAGATGCTTGGGAAGTGGAAACAGAAAAATGAGTTaGCTGTGGTCGCACGCACCT +
Preference number: 4 (lower is better)
Translates to: MLGKWMRTAFSQRCLGSGNRKMS*LWSHAP
Trigger: AGGTGCGTGCGACCACAGCCAACTCATTTTTCTGTT...TCCACTTCCCAAGCATCTCTGGCTGAATGCTGTTCTCATCCACTTCCCAAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTTCAGCCAGAGATGCTTaGGAAGTGGATGATGTCTAC +
Preference number: 4 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLSARDA*EVDDVY
Trigger: GTAGACATCATCCACTTCCCAAGCATCTCTGGCTGA...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp ATGCTTGGGAAGTGGATGAGAACAGCATTCAGCCAGAGATGCTTGGGAAGTGGAGAGATGCTTGGGAAGTaGATGAGAACAGCATTCAGC +
Preference number: 4 (lower is better)
Translates to: MLGKWMRTAFSQRCLGSGEMLGK*MRTAFS
Trigger: GCTGAATGCTGTTCTCATCCACTTCCCAAGCATCTC...TCCACTTCCCAAGCATCTCTGGCTGAATGCTGTTCTCATCCACTTCCCAAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CAA 72 bp ACTGTTCTACGTGGCATGTGGCTAGTGGCATCCCTTTaGTACAGCACAGAGAACATTTCCGGCATCTCAGAA +
Preference number: 4 (lower is better)
Translates to: TVLRGMWLVASL*YSTENISGISE
Trigger: TTCTGAGATGCCGGAAATGTTCTCTGTGCTGTACAAAAGGGATGCCACTAGCCACATGCCACGTAGAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp TTCATGTGGCTGTCAGGACATGTTTCAAGCACCGAGTCCAGCATCTTGATAAGAAGCCAATCCTTGGGCTaGAGTTTGAGAAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: FMWLSGHVSSTESSILIRSQSLG*SLRNSR
Trigger: CCTGGAGTTTCTCAAACTGCAGCCCAAGGATTGGCT...TCTTATCAAGATGCTGGACTCGGTGCTTGAAACATGTCCTGACAGCCACATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTAGCAGAACTGCGAGTCTaGCCAGGCTTTTCATTTCTT +
Preference number: 4 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILAELRV*PGFSFL
Trigger: AAGAAATGAAAAGCCTGGGCAGACTCGCAGTTCTGC...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp ATGCTTGGGAAGTGGATGAGAACAGCATTCAGCCAGAGATGCTTGGGAAGTGGATGGTGTGTAGGAGCATaGATTTGTAGGCACCACAAT +
Preference number: 4 (lower is better)
Translates to: MLGKWMRTAFSQRCLGSGWCVGA*ICRHHN
Trigger: ATTGTGGTGCCTACAAATGCATGCTCCTACACACCA...TCCACTTCCCAAGCATCTCTGGCTGAATGCTGTTCTCATCCACTTCCCAAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGACAGCCAGAGATCCCCTaGCCCCACTCATGTCAAACG +
Preference number: 4 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRQPEIP*PHSCQT
Trigger: CGTTTGACATGAGTGGGGTCAGGGGATCTCTGGCTG...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGACCGGGAGCACCACCATaGCTCTTGCTTAGCCAAACC +
Preference number: 4 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRPGAPP*LLLSQT
Trigger: GGTTTGGCTAAGCAAGAGTCATGGTGGTGCTCCCGG...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGACAATCTGCGAAAAAGTaGGGATCCCAGGCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRQSAKK*GSQAAP
Trigger: GGGCGCAGCCTGGGATCCTCACTTTTTCGCAGATTG...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGAGGCCGTGGCGGTCTGTaGCAGCTTTTCCTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRGRGGL*QLFLGL
Trigger: AAGACCAAGGAAAAGCTGGCACAGACCGCCACGGCC...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTGCTGTTTCTTCCTTTTaGCTATTAAACTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLAVSSF*LLNSCS
Trigger: GGAGCAGGAGTTTAATAGGCAAAAGGAAGAAACAGC...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp TTCATGTGGCTGTCAGGACATGTTTCAAGCACCGAGTCCAGCATCTTGATAAGAGTCCCCACCCCAGTCTaGAAAGGAAAGATGGTTTTT +
Preference number: 4 (lower is better)
Translates to: FMWLSGHVSSTESSILIRVPTPV*KGKMVF
Trigger: AAAAACCATCTTTCCTTTGCAGACTGGGGTGGGGAC...TCTTATCAAGATGCTGGACTCGGTGCTTGAAACATGTCCTGACAGCCACATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGATGGGGAGACCAAGATTaGCAAGAGGGAGGCTCGGCT +
Preference number: 4 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRWGDQD*QEGGSA
Trigger: AGCCGAGCCTCCCTCTTGCCAATCTTGGTCTCCCCA...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGGAGACACGAGATCTGTaGTGCTACTTTGTAATTCGC +
Preference number: 4 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGETRDL*CYFVIR
Trigger: GCGAATTACAAAGTAGCACCACAGATCTCGTGTCTC...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp ATGCTTGGGAAGTGGATGAGAACAGCATTCAGCCAGAGATGCTTGGGAAGTGGAGAGCACTTTGGTGGCTaGAATATTCTAGAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: MLGKWMRTAFSQRCLGSGEHFGG*NILERG
Trigger: TCCTCTTTCTAGAATATTCCAGCCACCAAAGTGCTC...TCCACTTCCCAAGCATCTCTGGCTGAATGCTGTTCTCATCCACTTCCCAAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp TTCATGTGGCTGTCAGGACATGTTTCAAGCACCGAGTCCAGCATCTTGATAAGAAGCCACATACATAGATaGGCCCCAGTGAAAACAGTG +
Preference number: 4 (lower is better)
Translates to: FMWLSGHVSSTESSILIRSHIHR*APVKTV
Trigger: CACTGTTTTCACTGGGGCCCATCTATGTATGTGGCT...TCTTATCAAGATGCTGGACTCGGTGCTTGAAACATGTCCTGACAGCCACATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGAGTAATCCCAGTACTTTaGGGGGCCGAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRVIPVL*GAEAGG
Trigger: TCCACCTGCCTCGGCCCCCCAAAGTACTGGGATTAC...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp TTCATGTGGCTGTCAGGACATGTTTCAAGCACCGAGTCCAGCATCTTGATAAGAGTGATTTTGTCATGTTaGCCAGGCTGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: FMWLSGHVSSTESSILIRVILSC*PGWSRT
Trigger: AGTTCGAGACCAGCCTGGCCAACATGACAAAATCAC...TCTTATCAAGATGCTGGACTCGGTGCTTGAAACATGTCCTGACAGCCACATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTTCTGCAAAGGAAAGATaGTTTTTATGGCCACTTCCC +
Preference number: 4 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLSAKER*FLWPLP
Trigger: GGGAAGTGGCCATAAAAACCATCTTTCCTTTGCAGA...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGAACTCCTGGCTTCAAGTaGTCCTCCCACTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRTPGFK*SSHFSL
Trigger: GAGGCTGAAGTGGGAGGATCACTTGAAGCCAGGAGT...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGGGAGAGAGACACATCTaGTGTAGAAAGAGTGATACA +
Preference number: 4 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGGERHI*CRKSDT
Trigger: TGTATCACTCTTTCTACAGCAGATGTGTCTCTCTCC...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTAAATCTCACTCTGTGTaGATCCACATCCTTGATTTC +
Preference number: 4 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLKSHSV*IHILDF
Trigger: GAAATCAAGGATGTGGATGCACACAGAGTGAGATTT...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTTTTTTCTCTCTTTCCTaGAATGCTGCAATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLFFSLS*NAAILA
Trigger: AGCCAAGATTGCAGCATTGCAGGAAAGAGAGAAAAA...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTATCTATTTTCCCAGGCTaGACAAATCTGGCTTTGATG +
Preference number: 4 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILSIFPG*TNLALM
Trigger: CATCAAAGCCAGATTTGTGCAGCCTGGGAAAATAGA...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGGAGATGCTTGGGAAGTaGATGATGTCTACCATTCTA +
Preference number: 4 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGEMLGK*MMSTIL
Trigger: TAGAATGGTAGACATCATCCACTTCCCAAGCATCTC...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGCACTCCTGGATTCTTTaGATATTTGGGAGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGHSWIL*IFGRLN
Trigger: ATTCAGCCTCCCAAATATCCAAAGAATCCAGGAGTG...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CAA 72 bp TCCAACTGTATCATTTTATCTTCGTCCTCAGCTTTTTaGAAGAGAAAGGGAGTGCAGGCTCCGCAGTGCGAA +
Preference number: 4 (lower is better)
Translates to: SNCIILSSSSAF*KRKGVQAPQCE
Trigger: TTCGCACTGCGGAGCCTGCACTCCCTTTCTCTTCAAAAAAGCTGAGGACGAAGATAAAATGATACAGTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGAACGATGTTCTTCATCTaGCGCCTCAAGGACGAGGTC +
Preference number: 4 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRTMFFI*RLKDEV
Trigger: GACCTCGTCCTTGAGGCGCCAGATGAAGAACATCGT...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGAGTAATCCCAACACTTTaGAAGGCCGAGGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRVIPTL*KAEVGR
Trigger: TCTGCCCACCTCGGCCTTCCAAAGTGTTGGGATTAC...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGACATTGCACTCTAGCCTaGGTGACGACAGTGAAACTC +
Preference number: 4 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRHCTLA*VTTVKL
Trigger: GAGTTTCACTGTCGTCACCCAGGCTAGAGTGCAATG...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGACTTGATTTGGGTGGATaGGAACATTCCCCACAACAC +
Preference number: 4 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRLDLGG*EHSPQH
Trigger: GTGTTGTGGGGAATGTTCTCATCCACCCAAATCAAG...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp TTCATGTGGCTGTCAGGACATGTTTCAAGCACCGAGTCCAGCATCTTGATAAGACACCAGTTTCACATTTaGCTGGTTTTTGGGTATTTA +
Preference number: 4 (lower is better)
Translates to: FMWLSGHVSSTESSILIRHQFHI*LVFGYL
Trigger: TAAATACCCAAAAACCAGTCAAATGTGAAACTGGTG...TCTTATCAAGATGCTGGACTCGGTGCTTGAAACATGTCCTGACAGCCACATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGAGGCCTTCTTTGTAACTaGTATGCAGACCTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRGLLCN*YADLWL
Trigger: AAGCCAGAGGTCTGCATAGCAGTTACAAAGAAGGCC...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGTTGCTGATGCCTTATTaGCCTGGTCTAAAATTTTTA +
Preference number: 4 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGLLMPY*PGLKFL
Trigger: TAAAAATTTTAGACCAGGCCAATAAGGCATCAGCAA...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CAA 72 bp ACGAGTGAGGCATTTGCAGGGGTGGTTATGATAATATaGTCTATAGTTTTGTGTGCTTCAAGATGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: TSEAFAGVVMII*SIVLCASRCPS
Trigger: TGAGGGACATCTTGAAGCACACAAAACTATAGACAATATTATCATAACCACCCCTGCAAATGCCTCACTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR GCA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGACACAACTTTAAAGAATaGTGGCATAGGCCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRHNFKE*WHRPGV
Trigger: CACTCCTGGCCTATGCCAGCATTCTTTAAAGTTGTG...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR TCA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGAACCCCCATCAATGCATaGGTTATACCTTTTGACAGT +
Preference number: 4 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRTPINA*VIPFDS
Trigger: ACTGTCAAAAGGTATAACTCATGCATTGATGGGGGT...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CCA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGAGTTTACACTCAAGACTaGACAAGGGTTTCCATAGGA +
Preference number: 4 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRVYTQD*TRVSIG
Trigger: TCCTATGGAAACCCTTGTCCAGTCTTGAGTGTAAAC...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
3UTR CAA 72 bp GTCATAATTAAACATTCCCTAGTTCCCTACGGTAAATaGCTGATGCCTTATTGGCCTGGTCTAAAATTTTTA +
Preference number: 4 (lower is better)
Translates to: VIIKHSLVPYGK*LMPYWPGLKFL
Trigger: TAAAAATTTTAGACCAGGCCAATAAGGCATCAGCAATTTACCGTAGGGAACTAGGGAATGTTTAATTATGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS GCA 90 bp TGGCGGTCAGCCCCCTGCCCCGCTCGGCCTCGGTGTCGCGGGACGTaGGCCGGGCCACGGGCGCACGCACGAACGCAAGGAGGGCCGCAC +
Preference number: 5 (lower is better)
Translates to: WRSAPCPARPRCRGT*AGPRAHARTQGGPH
Trigger: GTGCGGCCCTCCTTGCGTTCGTGCGTGCGCCCGTGGCCCGGCGCACGTCCCGCGACACCGAGGCCGAGCGGGGCAGGGGGCTGACCGCCA
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS CCA 90 bp GGCCAGTGGCTGGGCCTCCGCCTGGCAGGAAGGGGTTGGAGGCCTTaGCTCCAGGCGGCGTGGGGCCCGGCCGGCTCACCAGCGAGTCCA +
Preference number: 5 (lower is better)
Translates to: GQWLGLRLAGRGWRP*LQAAWGPAGSPASP
Trigger: TGGACTCGCTGGTGAGCCGGCCGGGCCCCACGCCGCCTGGAGCCAAGGCCTCCAACCCCTTCCTGCCAGGCGGAGGCCCAGCCACTGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000085079.11
ENST00000270460.11
ENST00000411543.6
CDS CCA 90 bp CTCCGCCTGGCAGGAAGGGGTTGGAGGCCTTGGCTCCAGGCGGCGTaGGGCCCGGCCGGCTCACCAGCGAGTCCAGGTCGACGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: LRLAGRGWRPWLQAA*GPAGSPASPGRRGL
Trigger: CAGCCCTCGTCGACCTGGACTCGCTGGTGAGCCGGCCGGGCCCCACGCCGCCTGGAGCCAAGGCCTCCAACCCCTTCCTGCCAGGCGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000085079.11
ENST00000270460.11
ENST00000411543.6
CDS CCA 90 bp CCGGCTGCAGCAGCAAGGGGCACAGGGCCCCGATGCGTGGAGAGATaGGGCGACTCCCGGACGAAGGCTGCGGCAGGTGCTGGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: PAAAARGTGPRCVER*GDSRTKAAAGAGRS
Trigger: TGACCTGCCAGCACCTGCCGCAGCCTTCGTCCGGGAGTCGCCCCATCTCTCCACGCATCGGGGCCCTGTGCCCCTTGCTGCTGCAGCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000085079.11
ENST00000270460.11
ENST00000411543.6
CDS CCA 90 bp CTGAGACGGAGCTGGTTCAGGGTGAGCGTCGCGGGAGGCGCGGGCTaGAAGGGGTTGGTGACGGAAGGGCCAGTGGCTGGGCCTCCGCCT +
Preference number: 5 (lower is better)
Translates to: LRRSWFRVSVAGGAG*KGLVTEGPVAGPPP
Trigger: AGGCGGAGGCCCAGCCACTGGCCCTTCCGTCACCAACCCCTTCCAGCCCGCGCCTCCCGCGACGCTCACCCTGAACCAGCTCCGTCTCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000085079.11
ENST00000270460.11
ENST00000411543.6
CDS GCA 90 bp AGGGCCCCGATGCGTGGAGAGATGGGGCGACTCCCGGACGAAGGCTaGGGCAGGTGCTGGCAGGTCACCGCATCCAGGGCGGCAGGAAGA +
Preference number: 5 (lower is better)
Translates to: RAPMRGEMGRLPDEG*GRCWQVTASRAAGR
Trigger: TCTTCCTGCCGCCCTGGATGCGGTGACCTGCCAGCACCTGCCGCAGCCTTCGTCCGGGAGTCGCCCCATCTCTCCACGCATCGGGGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411543.6
CDS-3UTR CAA 90 bp TCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGAAGGGGTTGGAGGCCTaGGCTCCAGGCGGCGTGGGG +
Preference number: 5 (lower is better)
Translates to: SPRIHRGCVSGCVRGTRRKGLEA*APGGVG
Trigger: CCCCACGCCGCCTGGAGCCAAGGCCTCCAACCCCTT...CCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CAA 90 bp GAGGGCGGGAGTAGAGCGAGGGGTAAGGCTAGGGTGAGCACAGGTGGCAGGGGACCTGGCAGGAAGGGGTaGGAGGCCTTGGCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: EGGSRARGKARVSTGGRGPGRKG*EALAPG
Trigger: GCCTGGAGCCAAGGCCTCCAACCCCTTCCTGCCAGG...TCCCCTGCCACCTGTGCTCACCCTAGCCTTACCCCTCGCTCTACTCCCGCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS GCA 90 bp GCAGCTCCAGCTCTCCTGCGCTGCTCCCGGAGGTCGGCAGTGCCGTaGGGAGTCGGTCAAAGTCAGAGAACTCGTCGGGCTCCGTGTCGA +
Preference number: 5 (lower is better)
Translates to: AAPALLRCSRRSAVP*GVGQSQRTRRAPCR
Trigger: TCGACACGGAGCCCGACGAGTTCTCTGACTTTGACCGACTCCGCACGGCACTGCCGACCTCCGGGAGCAGCGCAGGAGAGCTGGAGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000085079.11
ENST00000270460.11
ENST00000411543.6
CDS CCA 90 bp TCCTTATCATGCTCTTCTCGGCTCAAACTAAGGGCCAGCTGGAGCTaGGCGTCGTCCTCGGGGCCGCAGGACGGGGGCTGGTCGGCCTCC +
Preference number: 5 (lower is better)
Translates to: SLSCSSRLKLRASWS*ASSSGPQDGGWSAS
Trigger: GGAGGCCGACCAGCCCCCGTCCTGCGGCCCCGAGGACGACGCCCAGCTCCAGCTGGCCCTTAGTTTGAGCCGAGAAGAGCATGATAAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270460.11
ENST00000591743.1
CDS CCA 90 bp CGCTCCTCCTTATCATGCTCTTCTCGGCTCAAACTAAGGGCCAGCTaGAGCTGGGCGTCGTCCTCGGGGCCGCAGGACGGGGGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: RSSLSCSSRLKLRAS*SWASSSGPQDGGWS
Trigger: CGACCAGCCCCCGTCCTGCGGCCCCGAGGACGACGCCCAGCTCCAGCTGGCCCTTAGTTTGAGCCGAGAAGAGCATGATAAGGAGGAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270460.11
ENST00000591743.1
CDS GCA 90 bp TTCTTCATCTGGCGCCTCAAGGACGAGGTCGACATGGTGCCCGGCTaGAGCAGCAAGGGGCACAGGGCCCCGATGCGTGGAGAGATGGGG +
Preference number: 5 (lower is better)
Translates to: FFIWRLKDEVDMVPG*SSKGHRAPMRGEMG
Trigger: CCCCATCTCTCCACGCATCGGGGCCCTGTGCCCCTTGCTGCTGCAGCCGGGCACCATGTCGACCTCGTCCTTGAGGCGCCAGATGAAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000085079.11
ENST00000270460.11
ENST00000411543.6
CDS-3UTR CAA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGTGGTCGGCCTCCTCCTaGCTCATGGCCAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGWSASS*LMARAS
Trigger: GCTGGCCCTGGCCATGAGCAAGGAGGAGGCCGACCA...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS GCA 90 bp GTCGTGTCCAGTAAGCTGCGCTGCTCCCGGAGGTCGGCAGTGCCGTaGGGAGTCGGTCAAAGTCAGAGAACTCGTCGGGCTCCGTGTCGA +
Preference number: 5 (lower is better)
Translates to: VVSSKLRCSRRSAVP*GVGQSQRTRRAPCR
Trigger: TCGACACGGAGCCCGACGAGTTCTCTGACTTTGACCGACTCCGCACGGCACTGCCGACCTCCGGGAGCAGCGCAGCTTACTGGACACGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589704.1
CDS-3UTR CAA 90 bp CCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAGCTTTTCCTTGGTCTaGAGCGCGTGCGCCCGCTCT +
Preference number: 5 (lower is better)
Translates to: PRIHRGCVSGCVRGTRRLSFSLV*SACARS
Trigger: AGAGCGGGCGCACGCGCTCAAGACCAAGGAAAAGCT...GAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CAA 90 bp TCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCCGGCTGTTGTGCCATaGGTGCTGGGCTTGGCAGGT +
Preference number: 5 (lower is better)
Translates to: SPRIHRGCVSGCVRGTRRPAVVP*VLGLAG
Trigger: ACCTGCCAAGCCCAGCACCAATGGCACAACAGCCGG...CCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000085079.11
CDS-3UTR CAA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGCCTGGCAGGAAGGGGTaGGAGGCCTTGGCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: AKIITKDSPRVRERVREGPGRKG*EALAPG
Trigger: GCCTGGAGCCAAGGCCTCCAACCCCTTCCTGCCAGG...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CAA 90 bp TCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGGTGGGGAGACCAAGATaGGCAAGAGGGAGGCTCGGC +
Preference number: 5 (lower is better)
Translates to: SPRIHRGCVSGCVRGTRRVGRPR*ARGRLG
Trigger: GCCGAGCCTCCCTCTTGCCAATCTTGGTCTCCCCAC...CCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS GCA 90 bp AGGAAGTCGTGTCCAGTAAGCTGCGCTGCTCCCGGAGGTCGGCAGTaGCGTGCGGAGTCGGTCAAAGTCAGAGAACTCGTCGGGCTCCGT +
Preference number: 5 (lower is better)
Translates to: RKSCPVSCAAPGGRQ*RAESVKVRELVGLR
Trigger: ACGGAGCCCGACGAGTTCTCTGACTTTGACCGACTCCGCACGGCACTGCCGACCTCCGGGAGCAGCGCAGCTTACTGGACACGACTTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589704.1
CDS-3UTR CAA 90 bp TCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCGCTCCGAGCCGGTCTaGATGAGGTACTCCATCAGC +
Preference number: 5 (lower is better)
Translates to: SPRIHRGCVSGCVRGTRRRSEPV*MRYSIS
Trigger: GCTGATGGAGTACCTCATCAAGACCGGCTCGGAGCG...CCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CAA 90 bp TCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCCCCCAGTCTCCCTCTaGCTCTCCTCGATTGCCATC +
Preference number: 5 (lower is better)
Translates to: SPRIHRGCVSGCVRGTRRPPVSL*LSSIAI
Trigger: GATGGCAATCGAGGAGAGCAAGAGGGAGACTGGGGG...CCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS GCA 90 bp GCTGTTGAGGGAGTAGAAGCCAGGAGGAAGTCGTGTCCAGTAAGCTaGGCTGCTCCCGGAGGTCGGCAGTGCCGTGCGGAGTCGGTCAAA +
Preference number: 5 (lower is better)
Translates to: AVEGVEARRKSCPVS*AAPGGRQCRAESVK
Trigger: TTTGACCGACTCCGCACGGCACTGCCGACCTCCGGGAGCAGCGCAGCTTACTGGACACGACTTCCTCCTGGCTTCTACTCCCTCAACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589704.1
CDS-3UTR CAA 90 bp TCCCTGGGACCCACCTCTTCCTGCATGGTGTGGTCAGCAATTCCTCCATCAAGCTGGTCGGCCTCCTCCTaGCTCATGGCCAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: SLGPTSSCMVWSAIPPSSWSASS*LMARAS
Trigger: GCTGGCCCTGGCCATGAGCAAGGAGGAGGCCGACCA...GCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp CCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACACTGACTTCTTGCTCTCCTCGATaGCCATCTGCAGCCGCAGGT +
Preference number: 5 (lower is better)
Translates to: PRVRERVREGNEEAQTLTSCSPR*PSAAAG
Trigger: ACCTGCGGCTGCAGATGGCAATCGAGGAGAGCAAGA...AGTCAGTGTTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CAA 90 bp TCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGTCTTGCTCTCCTCGATaGCCATCTGCAGCCGCAGGT +
Preference number: 5 (lower is better)
Translates to: SPRIHRGCVSGCVRGTRRSCSPR*PSAAAG
Trigger: ACCTGCGGCTGCAGATGGCAATCGAGGAGAGCAAGA...CCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CAA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAGGGACGACTCCTCCTaGCCCCCAGTCTCCCTCTTG +
Preference number: 5 (lower is better)
Translates to: AKIITKDSPRVRERVREGRDDSS*PPVSLL
Trigger: CAAGAGGGAGACTGGGGGCAAGGAGGAGTCGTCCCT...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CAA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGCGAATCCCCCGGCTGTaGTGCCATTGGTGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: AKIITKDSPRVRERVREGRIPRL*CHWCWA
Trigger: AGCCCAGCACCAATGGCACAACAGCCGGGGGATTCG...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000085079.11
CDS-3UTR CAA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGTCGACGAGGGCTGCATaGGGCCCCAGGAATGACTCC +
Preference number: 5 (lower is better)
Translates to: IITKDSPRVRERVREGNESTRAA*GPRNDS
Trigger: GGAGTCATTCCTGGGGCCCAATGCAGCCCTCGTCGA...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CAA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGACTAAGCTCAGGTGCTaGGGCCTCATGGGGGACTCC +
Preference number: 5 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGTKLRC*GLMGDS
Trigger: GGAGTCCCCCATGAGGCCCAAGCACCTGAGCTTAGT...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACGTGATGCCCTAAGCTaGCCTCCCCTGCGGATGGAT +
Preference number: 5 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKRDALS*PPLRMD
Trigger: ATCCATCCGCAGGGGAGGCAAGCTTAGGGCATCACG...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGGCGTACATGTTCTCCTaGCACTGCTGCGACACGCGC +
Preference number: 5 (lower is better)
Translates to: AKIITKDSPRVRERVREGAYMFS*HCCDTR
Trigger: GCGCGTGTCGCAGCAGTGCAAGGAGAACATGTACGC...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CAA 90 bp GCCAAAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGTGTGCCAGCTTTTCCTaGGTCTTGAGCGCGTGCGCC +
Preference number: 5 (lower is better)
Translates to: AKIITKDSPRVRERVREGCASFS*VLSACA
Trigger: GGCGCACGCGCTCAAGACCAAGGAAAAGCTGGCACA...CCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CAA 90 bp CCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACACTGACTGCCGAAATCACACCATaGCACTCTAGCCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: PRVRERVREGNEEAQTLTAEITP*HSSLGD
Trigger: GTCACCCAGGCTAGAGTGCAATGGTGTGATTTCGGC...AGTCAGTGTTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp CCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACACTGACTCACATGCGTGAGCTTTaGCGATACGGGGTGAGACAG +
Preference number: 5 (lower is better)
Translates to: PRVRERVREGNEEAQTLTHMREL*RYGVRQ
Trigger: CTGTCTCACCCCGTATCGCAAAAGCTCACGCATGTG...AGTCAGTGTTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS TCA 90 bp CAGGTGCTTGGGCCTCATGGGGGACTCCTACACAGCAGCTCCTGCTaGGCACTTTGGTGGCTGGAATATTCAGGTGTGGTCCAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: QVLGPHGGLLHSSSC*ALWWLEYSGVVQPR
Trigger: CCTGGGCTGGACCACACCTGAATATTCCAGCCACCAAAGTGCTCAGCAGGAGCTGCTGTGTAGGAGTCCCCCATGAGGCCCAAGCACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587937.1
CDS-3UTR CAA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGTCCTTGGGCTGCAGTTaGAGAAACTCCAGGGGCACC +
Preference number: 5 (lower is better)
Translates to: IITKDSPRVRERVREGNESLGCS*RNSRGT
Trigger: GGTGCCCCTGGAGTTTCTCAAACTGCAGCCCAAGGA...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS GCA 90 bp CCACTCTACCCAACTGAACTTTTCATCCCTAAGTCCAGCCGGCCCTaGCTGGAGTGGGACAAAGACAGCAAGGGACGGGGCTCCCGAAGA +
Preference number: 5 (lower is better)
Translates to: PLYPTELFIPKSSRP*LEWDKDSKGRGSRR
Trigger: TCTTCGGGAGCCCCGTCCCTTGCTGTCTTTGTCCCACTCCAGGCAGGGCCGGCTGGACTTAGGGATGAAAAGTTCAGTTGGGTAGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586194.1
CDS-3UTR CAA 90 bp GAGAGCGACTGTCTCCGTGTGGGCGAGAAGCCTGGAAACGGAGGAACTGGGTTTAGGCACGAGAATTGCTaGAACCTGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: ESDCLRVGEKPGNGGTGFRHENC*NLGGGG
Trigger: ACCTCCGCCTCCCAGGTTCAAGCAATTCTCGTGCCT...AAACCCAGTTCCTCCGTTTCCAGGCTTCTCGCCCACACGGAGACAGTCGCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp GGCTCAAACACTGACTGGGGGTTGGGAGTTTGGAGGGAGGGGGAATGGGTGGGGGGTGATTTTGTCATGTaGGCCAGGCTGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: GSNTDWGLGVWREGEWVGGDFVM*ARLVSN
Trigger: GTTCGAGACCAGCCTGGCCAACATGACAAAATCACC...CCCCACCCATTCCCCCTCCCTCCAAACTCCCAACCCCCAGTCAGTGTTTGAGCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS CCA 90 bp TCTACCCAACTGAACTTTTCATCCCTAAGTCCAGCCGGCCCTGCCTaGAGTGGGACAAAGACAGCAAGGGACGGGGCTCCCGAAGAGCTA +
Preference number: 5 (lower is better)
Translates to: STQLNFSSLSPAGPA*SGTKTARDGAPEEL
Trigger: TAGCTCTTCGGGAGCCCCGTCCCTTGCTGTCTTTGTCCCACTCCAGGCAGGGCCGGCTGGACTTAGGGATGAAAAGTTCAGTTGGGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586194.1
CDS-3UTR CAA 90 bp GAGAGCGACTGTCTCCGTGTGGGCGAGAAGCCTGGAAACGGAGGAACTGGGTTTCCAACAGCACTCCTTTaGCTCTGCAATCCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: ESDCLRVGEKPGNGGTGFPTALL*LCNPQV
Trigger: CACCTGGGGATTGCAGAGCAAAAGGAGTGCTGTTGG...AAACCCAGTTCCTCCGTTTCCAGGCTTCTCGCCCACACGGAGACAGTCGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp TTCATGTGGCTGTCAGGACATGTTTCAAGCACCGAGTCCAGCATCTTGATAAGACTGGCCGTCTGGAGCTaGTCCCAGCCCGGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: FMWLSGHVSSTESSILIRLAVWS*SQPGSP
Trigger: CGGGGAGCCGGGCTGGGACAAGCTCCAGACGGCCAG...TCTTATCAAGATGCTGGACTCGGTGCTTGAAACATGTCCTGACAGCCACATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp GTGCTCCAGGGGAGGGGCCATGAGGAGGCTGTAGGTGAAACAGGAGTGGTTCAAACAGCAGCTATCTCCTaGGTTGAGGGCACTTCCCAC +
Preference number: 5 (lower is better)
Translates to: VLQGRGHEEAVGETGVVQTAAIS*VEGTSH
Trigger: GTGGGAAGTGCCCTCAACCAAGGAGATAGCTGCTGT...TTGAACCACTCCTGTTTCACCTACAGCCTCCTCATGGCCCCTCCCCTGGAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp GAGGGCGGGAGTAGAGCGAGGGGTAAGGCTAGGGTGAGCACAGGTGGCAGGGGAACACTCCTGGATTCTTaGGATATTTGGGAGGCTGAA +
Preference number: 5 (lower is better)
Translates to: EGGSRARGKARVSTGGRGTLLDS*DIWEAE
Trigger: TTCAGCCTCCCAAATATCCAAAGAATCCAGGAGTGT...TCCCCTGCCACCTGTGCTCACCCTAGCCTTACCCCTCGCTCTACTCCCGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAAATTGTGGACCTACTCTaGGATCTCTTGGCACACTCC +
Preference number: 5 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKIVDLL*DLLAHS
Trigger: GGAGTGTGCCAAGAGATCCAAGAGTAGGTCCACAAT...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACCAAGCCCGTGGGAATaGCCATTTATTCCCAAAGTT +
Preference number: 5 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKPSPWE*PFIPKV
Trigger: AACTTTGGGAATAAATGGCAATTCCCACGGGCTTGG...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS-3UTR CAA 90 bp AAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGGCAAGCAGCCAATCCTaGGGCTGCAGTTTGAGAAAC +
Preference number: 5 (lower is better)
Translates to: KSSPRIHRGCVSGCVRGTASSQS*GCSLRN
Trigger: GTTTCTCAAACTGCAGCCCAAGGATTGGCTGCTTGC...CGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGAAACAGAAAAATGAGTaGGCTGTGGTCGCACGCACC +
Preference number: 5 (lower is better)
Translates to: IITKDSPRVRERVREGNEKQKNE*AVVART
Trigger: GGTGCGTGCGACCACAGCCAACTCATTTTTCTGTTT...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp GAGAGCGACTGTCTCCGTGTGGGCGAGAAGCCTGGAAACGGAGGAACTGGGTTTACCGAGTCCAGCATCTaGATAAGATGGGAACCAGGG +
Preference number: 5 (lower is better)
Translates to: ESDCLRVGEKPGNGGTGFTESSI*IRWEPG
Trigger: CCCTGGTTCCCATCTTATCAAGATGCTGGACTCGGT...AAACCCAGTTCCTCCGTTTCCAGGCTTCTCGCCCACACGGAGACAGTCGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp TCCCTGGGACCCACCTCTTCCTGCATGGTGTGGTCAGCAATTCCTCCATCAAGCAAGAACAGAATGGCATaGGCCAGAGTCCCCACCCCA +
Preference number: 5 (lower is better)
Translates to: SLGPTSSCMVWSAIPPSSKNRMA*ARVPTP
Trigger: TGGGGTGGGGACTCTGGCCAATGCCATTCTGTTCTT...GCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTTCGACGAGGGCTGCATaGGGCCCCAGGAATGACTCC +
Preference number: 5 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLSTRAA*GPRNDS
Trigger: GGAGTCATTCCTGGGGCCCAATGCAGCCCTCGTCGA...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTATCCCCCGGCTGCTGTaGTGCCATTGGTGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLIPRLL*CHWCWA
Trigger: AGCCCAGCACCAATGGCACAACAGCAGCCGGGGGAT...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp CTCAATCGGGGACAACAGCAGGCTCCCAGCATTCTCCCAGCGTTCAACCGTGTAACAACACAAGCCATTTaGCAACCTCACCTCCCGAGC +
Preference number: 5 (lower is better)
Translates to: LNRGQQQAPSILPAFNRVTTQAI*QPHLPS
Trigger: GCTCGGGAGGTGAGGTTGCAAAATGGCTTGTGTTGT...TACACGGTTGAACGCTGGGAGAATGCTGGGAGCCTGCTGTTGTCCCCGATTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp CCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCGGAGACACAAGGTCCTaGTTCAAATCATGTATTTCT +
Preference number: 5 (lower is better)
Translates to: PRIHRGCVSGCVRGTRRLGDTRS*FKSCIS
Trigger: AGAAATACATGATTTGAACAAGGACCTTGTGTCTCC...GAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS GCA 90 bp AGAGATAAGGAACCTAACAGCCCCACTGCCTGGGTCCCTGCTGTGTaGCAGGTGCTCGCTCAGCACAAGAGGGACATTACCTTTTTCAAC +
Preference number: 5 (lower is better)
Translates to: RDKEPNSPTAWVPAV*QVLAQHKRDITFFN
Trigger: GTTGAAAAAGGTAATGTCCCTCTTGTGCTGAGCGAGCACCTGGCACACAGCAGGGACCCAGGCAGTGGGGCTGTTAGGTTCCTTATCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411543.6
CDS-3UTR CAA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTGCGTACATGTTCTCCTaGCACTGCTGCGACACGCGC +
Preference number: 5 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLAYMFS*HCCDTR
Trigger: GCGCGTGTCGCAGCAGTGCAAGGAGAACATGTACGC...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp GAGAGCGACTGTCTCCGTGTGGGCGAGAAGCCTGGAAACGGAGGAACTGGGTTTCATTCTACGGATCACTaGCGATGCTTATTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: ESDCLRVGEKPGNGGTGFHSTDH*RCLFPR
Trigger: CCTGGGAAATAAGCATCGCAAGTGATCCGTAGAATG...AAACCCAGTTCCTCCGTTTCCAGGCTTCTCGCCCACACGGAGACAGTCGCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp AAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGGTTCCCTACGGTAAATaGCTGATGCCTTATTGGCCT +
Preference number: 5 (lower is better)
Translates to: KSSPRIHRGCVSGCVRGTVPYGK*LMPYWP
Trigger: AGGCCAATAAGGCATCAGCAATTTACCGTAGGGAAC...CGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS CCA 90 bp CAGCACAAGAGGGACATTACCTTTTTCAACACTGCATGCAAAGACTaGGCTCCTTACTCCTGGAGCAGCCTGGTTCCAGAGCCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: QHKRDITFFNTACKD*APYSWSSLVPEPAL
Trigger: CAGAGCTGGCTCTGGAACCAGGCTGCTCCAGGAGTAAGGAGCCCAGTCTTTGCATGCAGTGTTGAAAAAGGTAATGTCCCTCTTGTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411543.6
CDS CCA 90 bp TGTTCTTTGAGACACCTGGAGAGTTTGCAAGGCACTCAAGCAACGTaGAGGCAGAGACGGGTCAGAGGTCAACATTCGGGTGGGAAACCT +
Preference number: 5 (lower is better)
Translates to: CSLRHLESLQGTQAT*RQRRVRGQHSGGKP
Trigger: AGGTTTCCCACCCGAATGTTGACCTCTGACCCGTCTCTGCCTCCACGTTGCTTGAGTGCCTTGCAAACTCTCCAGGTGTCTCAAAGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586194.1
CDS-3UTR CAA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTACGCTCCGAGCCGGTCTaGATGAGGTACTCCATCAGC +
Preference number: 5 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILRSEPV*MRYSIS
Trigger: GCTGATGGAGTACCTCATCAAGACCGGCTCGGAGCG...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp GTGGACCTACTCTTGGATCTCTTGGCACACTCCTGGATTCTTTGGATATTTGGGTGTGCCAGCTTTTCCTaGGTCTTGAGCGCGTGCGCC +
Preference number: 5 (lower is better)
Translates to: VDLLLDLLAHSWILWIFGCASFS*VLSACA
Trigger: GGCGCACGCGCTCAAGACCAAGGAAAAGCTGGCACA...CCCAAATATCCAAAGAATCCAGGAGTGTGCCAAGAGATCCAAGAGTAGGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp CTCAATCGGGGACAACAGCAGGCTCCCAGCATTCTCCCAGCGTTCAACCGTGTACCAAGCCCGTGGGAATaGCCATTTATTCCCAAAGTT +
Preference number: 5 (lower is better)
Translates to: LNRGQQQAPSILPAFNRVPSPWE*PFIPKV
Trigger: AACTTTGGGAATAAATGGCAATTCCCACGGGCTTGG...TACACGGTTGAACGCTGGGAGAATGCTGGGAGCCTGCTGTTGTCCCCGATTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp TCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGATATTGTCTATAGTTTaGTGTGCTTCAAGATGTCCC +
Preference number: 5 (lower is better)
Translates to: SPRIHRGCVSGCVRGTRRILSIV*CASRCP
Trigger: GGGACATCTTGAAGCACACAAAACTATAGACAATAT...CCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp AAATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGCTAGTGGCATCCCTTTaGTACAGCACAGAGAACATT +
Preference number: 5 (lower is better)
Translates to: KSSPRIHRGCVSGCVRGTLVASL*YSTENI
Trigger: AATGTTCTCTGTGCTGTACAAAAGGGATGCCACTAG...CGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp TTCATGTGGCTGTCAGGACATGTTTCAAGCACCGAGTCCAGCATCTTGATAAGACCAAGGCCTCTCTCCTaGGCTCCCAGACGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: FMWLSGHVSSTESSILIRPRPLS*APRRLS
Trigger: AGACAGCCGTCTGGGAGCCAAGGAGAGAGGCCTTGG...TCTTATCAAGATGCTGGACTCGGTGCTTGAAACATGTCCTGACAGCCACATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp TCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGTCTTGGAAAGTTATTTaGGTCTTTCCTTTACCCGAA +
Preference number: 5 (lower is better)
Translates to: SPRIHRGCVSGCVRGTRRSWKVI*VFPLPE
Trigger: TTCGGGTAAAGGAAAGACCAAAATAACTTTCCAAGA...CCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp TCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGATTGCTGATGCCTTATaGGCCTGGTCTAAAATTTTT +
Preference number: 5 (lower is better)
Translates to: SPRIHRGCVSGCVRGTRRIADAL*AWSKIF
Trigger: AAAAATTTTAGACCAGGCCAATAAGGCATCAGCAAT...CCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGAAAGGGGTTGGAGGCCTaGGCTCCAGGCGGCGTGGGG +
Preference number: 5 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRKGLEA*APGGVG
Trigger: CCCCACGCCGCCTGGAGCCAAGGCCTCCAACCCCTT...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp TTCATGTGGCTGTCAGGACATGTTTCAAGCACCGAGTCCAGCATCTTGATAAGAAGTCAGGAGAATCGCTaGAACCCGGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: FMWLSGHVSSTESSILIRSQENR*NPGGGG
Trigger: ACCTCCGCCTCCCGGGTTCAAGCGATTCTCCTGACT...TCTTATCAAGATGCTGGACTCGGTGCTTGAAACATGTCCTGACAGCCACATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp AGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGGAGGCTCAAACATGAGTTATACCTTTaGACAGTAACACACAACGAT +
Preference number: 5 (lower is better)
Translates to: RIHRGCVSGCVRGTRRLKHELYL*TVTHND
Trigger: ATCGTTGTGTGTTACTGTCAAAAGGTATAACTCATG...TTTGAGCCTCCTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp GAGAGCGACTGTCTCCGTGTGGGCGAGAAGCCTGGAAACGGAGGAACTGGGTTTAGCTGTTTCTTCCTTTaGCCTATTAAACTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: ESDCLRVGEKPGNGGTGFSCFFL*PIKLLL
Trigger: GAGCAGGAGTTTAATAGGCAAAAGGAAGAAACAGCT...AAACCCAGTTCCTCCGTTTCCAGGCTTCTCGCCCACACGGAGACAGTCGCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp TTCTACAACTTCACAACCCGTTCGGGACCCGTCTCTGTGACAGAGCTGTTTCTTAACTCGGGCACAGACTaGGGAGGTTCCTGGGTAATC +
Preference number: 5 (lower is better)
Translates to: FYNFTTRSGPVSVTELFLNSGTD*GGSWVI
Trigger: GATTACCCAGGAACCTCCCAAGTCTGTGCCCGAGTT...AAGAAACAGCTCTGTCACAGAGACGGGTCCCGAACGGGTTGTGAAGTTGTAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp ATCATCACCAAGGATTCACCGAGGGTGCGTGAGCGGGTGCGTGAGGGGAACGAGTTGGCCTTTATTAACTaGACTCTGATAATGTTCGGG +
Preference number: 5 (lower is better)
Translates to: IITKDSPRVRERVREGNELAFIN*TLIMFG
Trigger: CCCGAACATTATCAGAGTCAAGTTAATAAAGGCCAA...CTCGTTCCCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp TCCCTGGGACCCACCTCTTCCTGCATGGTGTGGTCAGCAATTCCTCCATCAAGCCAAGCCTCTGGGTTTTaGTCTTGTTTTTCAATCCTG +
Preference number: 5 (lower is better)
Translates to: SLGPTSSCMVWSAIPPSSQASGF*SCFSIL
Trigger: CAGGATTGAAAAACAAGACAAAAACCCAGAGGCTTG...GCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp TCCCTGGGACCCACCTCTTCCTGCATGGTGTGGTCAGCAATTCCTCCATCAAGCAAACTTATCCTTAATTaGGTGAATGGAGGGTCTGAC +
Preference number: 5 (lower is better)
Translates to: SLGPTSSCMVWSAIPPSSKLILN*VNGGSD
Trigger: GTCAGACCCTCCATTCACCAAATTAAGGATAAGTTT...GCTTGATGGAGGAATTGCTGACCACACCATGCAGGAAGAGGTGGGTCCCAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp CTCAATCGGGGACAACAGCAGGCTCCCAGCATTCTCCCAGCGTTCAACCGTGTAGGTTTGTTTTCGTTTTaGTGTGTTTCCGTAGGCAAA +
Preference number: 5 (lower is better)
Translates to: LNRGQQQAPSILPAFNRVGLFSF*CVSVGK
Trigger: TTTGCCTACGGAAACACACAAAAACGAAAACAAACC...TACACGGTTGAACGCTGGGAGAATGCTGGGAGCCTGCTGTTGTCCCCGATTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp GTGCTCCAGGGGAGGGGCCATGAGGAGGCTGTAGGTGAAACAGGAGTGGTTCAAACACCAGTTTCACATTaGACTGGTTTTTGGGTATTT +
Preference number: 5 (lower is better)
Translates to: VLQGRGHEEAVGETGVVQTPVSH*TGFWVF
Trigger: AAATACCCAAAAACCAGTCAAATGTGAAACTGGTGT...TTGAACCACTCCTGTTTCACCTACAGCCTCCTCATGGCCCCTCCCCTGGAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp ATGCTTGGGAAGTGGATGAGAACAGCATTCAGCCAGAGATGCTTGGGAAGTGGATCGTCCTCAGCTTTTTaGAAGAGAAAGGGAGTGCAG +
Preference number: 5 (lower is better)
Translates to: MLGKWMRTAFSQRCLGSGSSSAF*KRKGVQ
Trigger: CTGCACTCCCTTTCTCTTCAAAAAAGCTGAGGACGA...TCCACTTCCCAAGCATCTCTGGCTGAATGCTGTTCTCATCCACTTCCCAAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp GGCTTGAGTAGCACATTCACTGTGTGGCAGAACTGCGAGTCTGCCCAGGCTTTTAGTGCTCGCACTTACTaGCTTAATTTTACTTCCAGG +
Preference number: 5 (lower is better)
Translates to: GLSSTFTVWQNCESAQAFSARTY*LNFTSR
Trigger: CCTGGAAGTAAAATTAAGCAAGTAAGTGCGAGCACT...AAAAGCCTGGGCAGACTCGCAGTTCTGCCACACAGTGAATGTGCTACTCAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS CCA 90 bp TCAAGCAACGTGGAGGCAGAGACGGGTCAGAGGTCAACATTCGGGTaGGAAACCTTGAGAACAATTCTCAGTTTTTCTCTAAGTCTGCAA +
Preference number: 5 (lower is better)
Translates to: SSNVEAETGQRSTFG*ETLRTILSFSLSLQ
Trigger: TTGCAGACTTAGAGAAAAACTGAGAATTGTTCTCAAGGTTTCCCACCCGAATGTTGACCTCTGACCCGTCTCTGCCTCCACGTTGCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586194.1
CDS-3UTR CAA 90 bp CAAGACCGTTTTACAGGAACAAGCCAGGCAGGGTCCCGAAAGCTCAGTATTTTAGGGTCAGCACACTTTTaGTTGAAGAGCCAGATAGTA +
Preference number: 5 (lower is better)
Translates to: QDRFTGTSQAGSRKLSILGSAHF*LKSQIV
Trigger: TACTATCTGGCTCTTCAACAAAAAGTGTGCTGACCC...TAAAATACTGAGCTTTCGGGACCCTGCCTGGCTTGTTCCTGTAAAACGGTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp ATGCTTGGGAAGTGGATGAGAACAGCATTCAGCCAGAGATGCTTGGGAAGTGGATCAGCACACTTTTTGTaGAAGAGCCAGATAGTAAAT +
Preference number: 5 (lower is better)
Translates to: MLGKWMRTAFSQRCLGSGSAHFL*KSQIVN
Trigger: ATTTACTATCTGGCTCTTCAACAAAAAGTGTGCTGA...TCCACTTCCCAAGCATCTCTGGCTGAATGCTGTTCTCATCCACTTCCCAAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS-3UTR CAA 90 bp CGCTATAGAACGTCAATGGATTTTCTCACAGTTCTGGAAACCAGAAATTCAAGAGGACAAAAGACACCATaGTGTGGGGGATTCCAGTGG +
Preference number: 5 (lower is better)
Translates to: RYRTSMDFLTVLETRNSRGQKTP*CGGFQW
Trigger: CCACTGGAATCCCCCACACAATGGTGTCTTTTGTCC...TCTTGAATTTCTGGTTTCCAGAACTGTGAGAAAATCCATTGACGTTCTATAGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270460.11
CDS GCA 72 bp GCCCCCTGCCCCGCTCGGCCTCGGTGTCGCGGGACGTaGGCCGGGCCACGGGCGCACGCACGAACGCAAGGA +
Preference number: 6 (lower is better)
Translates to: APCPARPRCRGT*AGPRAHARTQG
Trigger: TCCTTGCGTTCGTGCGTGCGCCCGTGGCCCGGCGCACGTCCCGCGACACCGAGGCCGAGCGGGGCAGGGGGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS CCA 72 bp CTGGGCCTCCGCCTGGCAGGAAGGGGTTGGAGGCCTTaGCTCCAGGCGGCGTGGGGCCCGGCCGGCTCACCA +
Preference number: 6 (lower is better)
Translates to: LGLRLAGRGWRP*LQAAWGPAGSP
Trigger: TGGTGAGCCGGCCGGGCCCCACGCCGCCTGGAGCCAAGGCCTCCAACCCCTTCCTGCCAGGCGGAGGCCCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000085079.11
ENST00000270460.11
ENST00000411543.6
CDS CCA 72 bp ATGGGGCGACTCCCGGACGAAGGCTGCGGCAGGTGCTaGCAGGTCACCGCATCTCGGCCCCCTCACGCCGGG +
Preference number: 6 (lower is better)
Translates to: MGRLPDEGCGRC*QVTASRPPHAG
Trigger: CCCGGCGTGAGGGGGCCGAGATGCGGTGACCTGCCAGCACCTGCCGCAGCCTTCGTCCGGGAGTCGCCCCAT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS CCA 72 bp GCAGGAAGGGGTTGGAGGCCTTGGCTCCAGGCGGCGTaGGGCCCGGCCGGCTCACCAGCGAGTCCAGGTCGA +
Preference number: 6 (lower is better)
Translates to: AGRGWRPWLQAA*GPAGSPASPGR
Trigger: TCGACCTGGACTCGCTGGTGAGCCGGCCGGGCCCCACGCCGCCTGGAGCCAAGGCCTCCAACCCCTTCCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000085079.11
ENST00000270460.11
ENST00000411543.6
CDS CAA 72 bp AGGGTGAGCGTCGCGGGAGGCGCGGGCTGGAAGGGGTaGGTGACGGAAGGGCCAGTGGCTGGGCCTCCGCCT +
Preference number: 6 (lower is better)
Translates to: RVSVAGGAGWKG*VTEGPVAGPPP
Trigger: AGGCGGAGGCCCAGCCACTGGCCCTTCCGTCACCAACCCCTTCCAGCCCGCGCCTCCCGCGACGCTCACCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000085079.11
ENST00000270460.11
ENST00000411543.6
CDS GCA 72 bp GAGATGGGGCGACTCCCGGACGAAGGCTGCGGCAGGTaGTGGCAGGTCACCGCATCTCGGCCCCCTCACGCC +
Preference number: 6 (lower is better)
Translates to: EMGRLPDEGCGR*WQVTASRPPHA
Trigger: GGCGTGAGGGGGCCGAGATGCGGTGACCTGCCAGCACCTGCCGCAGCCTTCGTCCGGGAGTCGCCCCATCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS CAA 90 bp AGCTGGTTCAGGGTGAGCGTCGCGGGAGGCGCGGGCTGGAAGGGGTaGGTGACGGAAGGGCCAGTGGCTGGGCCTCCGCCTGGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: SWFRVSVAGGAGWKG*VTEGPVAGPPPGRK
Trigger: CTTCCTGCCAGGCGGAGGCCCAGCCACTGGCCCTTCCGTCACCAACCCCTTCCAGCCCGCGCCTCCCGCGACGCTCACCCTGAACCAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000085079.11
ENST00000270460.11
ENST00000411543.6
CDS CCA 72 bp GCAGCAAGGGGCACAGGGCCCCGATGCGTGGAGAGATaGGGCGACTCCCGGACGAAGGCTGCGGCAGGTGCT +
Preference number: 6 (lower is better)
Translates to: AARGTGPRCVER*GDSRTKAAAGA
Trigger: AGCACCTGCCGCAGCCTTCGTCCGGGAGTCGCCCCATCTCTCCACGCATCGGGGCCCTGTGCCCCTTGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000085079.11
ENST00000270460.11
ENST00000411543.6
CDS CCA 72 bp AGCTGGTTCAGGGTGAGCGTCGCGGGAGGCGCGGGCTaGAAGGGGTTGGTGACGGAAGGGCCAGTGGCTGGG +
Preference number: 6 (lower is better)
Translates to: SWFRVSVAGGAG*KGLVTEGPVAG
Trigger: CCCAGCCACTGGCCCTTCCGTCACCAACCCCTTCCAGCCCGCGCCTCCCGCGACGCTCACCCTGAACCAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000085079.11
ENST00000270460.11
ENST00000411543.6
CDS CCA 72 bp GCCAGGGCCCCCGCCAAGGGGAGAGATGTACGTGGGTaGCGCTCCAGGGACGGGAGGCACAGGACTGAGACG +
Preference number: 6 (lower is better)
Translates to: ARAPAKGRDVRG*RSRDGRHRTET
Trigger: CGTCTCAGTCCTGTGCCTCCCGTCCCTGGAGCGCCACCCACGTACATCTCTCCCCTTGGCGGGGGCCCTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000085079.11
ENST00000270460.11
ENST00000411543.6
CDS GCA 72 bp ATGCGTGGAGAGATGGGGCGACTCCCGGACGAAGGCTaGGGCAGGTGCTGGCAGGTCACCGCATCTCGGCCC +
Preference number: 6 (lower is better)
Translates to: MRGEMGRLPDEG*GRCWQVTASRP
Trigger: GGGCCGAGATGCGGTGACCTGCCAGCACCTGCCGCAGCCTTCGTCCGGGAGTCGCCCCATCTCTCCACGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000085079.11
ENST00000270460.11
CDS GCA 72 bp GAGATGGGGCGACTCCCGGACGAAGGCTGCGGCAGGTaGTGGCAGGTCACCGCATCCAGGGCGGCAGGAAGA +
Preference number: 6 (lower is better)
Translates to: EMGRLPDEGCGR*WQVTASRAAGR
Trigger: TCTTCCTGCCGCCCTGGATGCGGTGACCTGCCAGCACCTGCCGCAGCCTTCGTCCGGGAGTCGCCCCATCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411543.6
CDS GCA 72 bp ATGCGTGGAGAGATGGGGCGACTCCCGGACGAAGGCTaGGGCAGGTGCTGGCAGGTCACCGCATCCAGGGCG +
Preference number: 6 (lower is better)
Translates to: MRGEMGRLPDEG*GRCWQVTASRA
Trigger: CGCCCTGGATGCGGTGACCTGCCAGCACCTGCCGCAGCCTTCGTCCGGGAGTCGCCCCATCTCTCCACGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411543.6
CDS CCA 72 bp CATTGGGCCCCAGGAATGACTCCGGCGTCTTCCGGGTaGGGGGCGTGGGAGTTGGTGTGGCTGCAGGTGGGG +
Preference number: 6 (lower is better)
Translates to: HWAPGMTPASSG*GAWELVWLQVG
Trigger: CCCCACCTGCAGCCACACCAACTCCCACGCCCCCCACCCGGAAGACGCCGGAGTCATTCCTGGGGCCCAATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000085079.11
ENST00000270460.11
ENST00000411543.6
CDS CAA 72 bp GAGGCCGTGGCGGTCTGTGCCAGCTTTTCCTTGGTCTaGAGCGCGTGCGCCCGCTCTTCCCGCAGCCGGTCC +
Preference number: 6 (lower is better)
Translates to: EAVAVCASFSLV*SACARSSRSRS
Trigger: GGACCGGCTGCGGGAAGAGCGGGCGCACGCGCTCAAGACCAAGGAAAAGCTGGCACAGACCGCCACGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000085079.11
ENST00000270460.11
ENST00000411543.6
ENST00000591743.1
CDS CAA 90 bp CCCACAGCTGCTGATGAGGCCGTGGCGGTCTGTGCCAGCTTTTCCTaGGTCTTGAGCGCGTGCGCCCGCTCTTCCCGCAGCCGGTCCTCG +
Preference number: 6 (lower is better)
Translates to: PTAADEAVAVCASFS*VLSACARSSRSRSS
Trigger: CGAGGACCGGCTGCGGGAAGAGCGGGCGCACGCGCTCAAGACCAAGGAAAAGCTGGCACAGACCGCCACGGCCTCATCAGCAGCTGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000085079.11
ENST00000270460.11
ENST00000411543.6
ENST00000591743.1
CDS TCA 72 bp GGGCCGGTGTCCAGGGATCGGAGGCTGAGGGCCCACTaGCCGGGACCCCACCATCGGAACTTCCCCATGGAT +
Preference number: 6 (lower is better)
Translates to: GPVSRDRRLRAH*PGPHHRNFPMD
Trigger: ATCCATGGGGAAGTTCCGATGGTGGGGTCCCGGTCAGTGGGCCCTCAGCCTCCGATCCCTGGACACCGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000085079.11
ENST00000270460.11
ENST00000411543.6
CDS CCA 72 bp GGCTCACCAGCGAGTCCAGGTCGACGAGGGCTGCATTaGGCCCCAGGAATGACTCCGGCGTCTTCCGGGTGG +
Preference number: 6 (lower is better)
Translates to: GSPASPGRRGLH*APGMTPASSGW
Trigger: CCACCCGGAAGACGCCGGAGTCATTCCTGGGGCCCAATGCAGCCCTCGTCGACCTGGACTCGCTGGTGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000085079.11
ENST00000270460.11
ENST00000411543.6
CDS CAA 72 bp CGGCTCACCAGCGAGTCCAGGTCGACGAGGGCTGCATaGGGCCCCAGGAATGACTCCGGCGTCTTCCGGGTG +
Preference number: 6 (lower is better)
Translates to: RLTSESRSTRAA*GPRNDSGVFRV
Trigger: CACCCGGAAGACGCCGGAGTCATTCCTGGGGCCCAATGCAGCCCTCGTCGACCTGGACTCGCTGGTGAGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000085079.11
ENST00000270460.11
ENST00000411543.6
CDS GCA 72 bp TCTTCATCTGGCGCCTCAAGGACGAGGTCGACATGGTaGCCGGCTGCAGCAGCAAGGGGCACAGGGCCCCGA +
Preference number: 6 (lower is better)
Translates to: SSSGASRTRSTW*PAAAARGTGPR
Trigger: TCGGGGCCCTGTGCCCCTTGCTGCTGCAGCCGGGCACCATGTCGACCTCGTCCTTGAGGCGCCAGATGAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000085079.11
ENST00000270460.11
ENST00000411543.6
CDS GCA 72 bp CCCCCAGTCTCCCTCTTGCTCTCCTCGATTGCCATCTaGAGCCGCAGGTCATCCCCGCGACGGATCCGCTCC +
Preference number: 6 (lower is better)
Translates to: PPVSLLLSSIAI*SRRSSPRRIRS
Trigger: GGAGCGGATCCGTCGCGGGGATGACCTGCGGCTGCAGATGGCAATCGAGGAGAGCAAGAGGGAGACTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000085079.11
ENST00000270460.11
ENST00000411543.6
CDS GCA 72 bp GCTCTCCTGCGCTGCTCCCGGAGGTCGGCAGTGCCGTaGGGAGTCGGTCAAAGTCAGAGAACTCGTCGGGCT +
Preference number: 6 (lower is better)
Translates to: ALLRCSRRSAVP*GVGQSQRTRRA
Trigger: AGCCCGACGAGTTCTCTGACTTTGACCGACTCCGCACGGCACTGCCGACCTCCGGGAGCAGCGCAGGAGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000085079.11
ENST00000270460.11
ENST00000411543.6
CDS GCA 72 bp GCTCACCTGCGCTGCTCCCGGAGGTCGGCAGTGCCGTaGGGAGTCGGTCAAAGTCAGAGAACTCGTCGGGCT +
Preference number: 6 (lower is better)
Translates to: AHLRCSRRSAVP*GVGQSQRTRRA
Trigger: AGCCCGACGAGTTCTCTGACTTTGACCGACTCCGCACGGCACTGCCGACCTCCGGGAGCAGCGCAGGTGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586194.1
CDS GCA 72 bp CAGGGGCTCACCTGCGCTGCTCCCGGAGGTCGGCAGTaGCGTGCGGAGTCGGTCAAAGTCAGAGAACTCGTC +
Preference number: 6 (lower is better)
Translates to: QGLTCAAPGGRQ*RAESVKVRELV
Trigger: GACGAGTTCTCTGACTTTGACCGACTCCGCACGGCACTGCCGACCTCCGGGAGCAGCGCAGGTGAGCCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586194.1
CDS CCA 72 bp TGCGGGATAGAAGTGGTCAGCCAGGAAGGGAGGCGCTaGCTAGACGTGGACCCAGGGACCCCCTCCTGGACC +
Preference number: 6 (lower is better)
Translates to: CGIEVVSQEGRR*LDVDPGTPSWT
Trigger: GGTCCAGGAGGGGGTCCCTGGGTCCACGTCTAGCCAGCGCCTCCCTTCCTGGCTGACCACTTCTATCCCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591743.1
CDS CAA 72 bp GCTGATGAGGCCGTGGCGGTCTGTGCCAGCTTTTCCTaGGTCTTGAGCGCGTGCGCCCGCTCTTCCCGCAGC +
Preference number: 6 (lower is better)
Translates to: ADEAVAVCASFS*VLSACARSSRS
Trigger: GCTGCGGGAAGAGCGGGCGCACGCGCTCAAGACCAAGGAAAAGCTGGCACAGACCGCCACGGCCTCATCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000085079.11
ENST00000270460.11
ENST00000411543.6
ENST00000591743.1
CDS GCA 72 bp CTCCAGCTCTCCTGCGCTGCTCCCGGAGGTCGGCAGTaGCGTGCGGAGTCGGTCAAAGTCAGAGAACTCGTC +
Preference number: 6 (lower is better)
Translates to: LQLSCAAPGGRQ*RAESVKVRELV
Trigger: GACGAGTTCTCTGACTTTGACCGACTCCGCACGGCACTGCCGACCTCCGGGAGCAGCGCAGGAGAGCTGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000085079.11
ENST00000270460.11
ENST00000411543.6
CDS GCA 72 bp GGAGTAGAAGCCAGGAGGAAGTCGTGTCCAGTAAGCTaGGCTGCTCCCGGAGGTCGGCAGTGCCGTGCGGAG +
Preference number: 6 (lower is better)
Translates to: GVEARRKSCPVS*AAPGGRQCRAE
Trigger: CTCCGCACGGCACTGCCGACCTCCGGGAGCAGCGCAGCTTACTGGACACGACTTCCTCCTGGCTTCTACTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589704.1
CDS CCA 72 bp TGTTCTTCATCTGGCGCCTCAAGGACGAGGTCGACATaGTGCCCGGCTGCAGCAGCAAGGGGCACAGGGCCC +
Preference number: 6 (lower is better)
Translates to: CSSSGASRTRST*CPAAAARGTGP
Trigger: GGGCCCTGTGCCCCTTGCTGCTGCAGCCGGGCACCATGTCGACCTCGTCCTTGAGGCGCCAGATGAAGAACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000085079.11
ENST00000270460.11
ENST00000411543.6
CDS GCA 72 bp AGTAAGCTGCGCTGCTCCCGGAGGTCGGCAGTGCCGTaGGGAGTCGGTCAAAGTCAGAGAACTCGTCGGGCT +
Preference number: 6 (lower is better)
Translates to: SKLRCSRRSAVP*GVGQSQRTRRA
Trigger: AGCCCGACGAGTTCTCTGACTTTGACCGACTCCGCACGGCACTGCCGACCTCCGGGAGCAGCGCAGCTTACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589704.1
CDS CCA 72 bp TTATCATGCTCTTCTCGGCTCAAACTAAGGGCCAGCTaGAGCTGGGCGTCGTCCTCGGGGCCGCAGGACGGG +
Preference number: 6 (lower is better)
Translates to: LSCSSRLKLRAS*SWASSSGPQDG
Trigger: CCCGTCCTGCGGCCCCGAGGACGACGCCCAGCTCCAGCTGGCCCTTAGTTTGAGCCGAGAAGAGCATGATAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270460.11
ENST00000591743.1
CDS CAA 90 bp GCAAGGTCCATGAGGGACGACTCCTCCTTGCCCCCAGTCTCCCTCTaGCTCTCCTCGATTGCCATCTGCAGCCGCAGGTCATCCCCGCGA +
Preference number: 6 (lower is better)
Translates to: ARSMRDDSSLPPVSL*LSSIAICSRRSSPR
Trigger: TCGCGGGGATGACCTGCGGCTGCAGATGGCAATCGAGGAGAGCAAGAGGGAGACTGGGGGCAAGGAGGAGTCGTCCCTCATGGACCTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000085079.11
ENST00000270460.11
ENST00000411543.6
CDS GCA 72 bp TGTCCAGTAAGCTGCGCTGCTCCCGGAGGTCGGCAGTaGCGTGCGGAGTCGGTCAAAGTCAGAGAACTCGTC +
Preference number: 6 (lower is better)
Translates to: CPVSCAAPGGRQ*RAESVKVRELV
Trigger: GACGAGTTCTCTGACTTTGACCGACTCCGCACGGCACTGCCGACCTCCGGGAGCAGCGCAGCTTACTGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589704.1
CDS GCA 72 bp GGTACTCCATCAGCGTCATGGCTTCCAGAAGGGGACTaGGGGATAGAAGTGGTCAGCCAGGAAGGGAGGCGC +
Preference number: 6 (lower is better)
Translates to: GTPSASWLPEGD*GIEVVSQEGRR
Trigger: GCGCCTCCCTTCCTGGCTGACCACTTCTATCCCGCAGTCCCCTTCTGGAAGCCATGACGCTGATGGAGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591743.1
CDS CCA 72 bp CTTTTCATCCCTAAGTCCAGCCGGCCCTGCCTGGAGTaGGACAAAGACAGCAAGGGACGGGGCTCCCGAAGA +
Preference number: 6 (lower is better)
Translates to: LFIPKSSRPCLE*DKDSKGRGSRR
Trigger: TCTTCGGGAGCCCCGTCCCTTGCTGTCTTTGTCCCACTCCAGGCAGGGCCGGCTGGACTTAGGGATGAAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586194.1
CDS CCA 72 bp CTGAACTTTTCATCCCTAAGTCCAGCCGGCCCTGCCTaGAGTGGGACAAAGACAGCAAGGGACGGGGCTCCC +
Preference number: 6 (lower is better)
Translates to: LNFSSLSPAGPA*SGTKTARDGAP
Trigger: GGGAGCCCCGTCCCTTGCTGTCTTTGTCCCACTCCAGGCAGGGCCGGCTGGACTTAGGGATGAAAAGTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586194.1
CDS CAA 72 bp ATGAGGGACGACTCCTCCTTGCCCCCAGTCTCCCTCTaGCTCTCCTCGATTGCCATCTGCAGCCGCAGGTCA +
Preference number: 6 (lower is better)
Translates to: MRDDSSLPPVSL*LSSIAICSRRS
Trigger: TGACCTGCGGCTGCAGATGGCAATCGAGGAGAGCAAGAGGGAGACTGGGGGCAAGGAGGAGTCGTCCCTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000085079.11
ENST00000270460.11
ENST00000411543.6
CDS GCA 72 bp CCAACTGAACTTTTCATCCCTAAGTCCAGCCGGCCCTaGCTGGAGTGGGACAAAGACAGCAAGGGACGGGGC +
Preference number: 6 (lower is better)
Translates to: PTELFIPKSSRP*LEWDKDSKGRG
Trigger: GCCCCGTCCCTTGCTGTCTTTGTCCCACTCCAGGCAGGGCCGGCTGGACTTAGGGATGAAAAGTTCAGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586194.1
CDS CAA 72 bp TCCTTGCACTGCTGCGACACGCGCTCCGAGCCGGTCTaGATGAGGTACTCCATCAGCGTCATGGCTTCCAGA +
Preference number: 6 (lower is better)
Translates to: SLHCCDTRSEPV*MRYSISVMASR
Trigger: TCTGGAAGCCATGACGCTGATGGAGTACCTCATCAAGACCGGCTCGGAGCGCGTGTCGCAGCAGTGCAAGGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591743.1
CDS CAA 90 bp TACATGTTCTCCTTGCACTGCTGCGACACGCGCTCCGAGCCGGTCTaGATGAGGTACTCCATCAGCGTCATGGCTTCCAGAAGGGGACTG +
Preference number: 6 (lower is better)
Translates to: YMFSLHCCDTRSEPV*MRYSISVMASRRGL
Trigger: CAGTCCCCTTCTGGAAGCCATGACGCTGATGGAGTACCTCATCAAGACCGGCTCGGAGCGCGTGTCGCAGCAGTGCAAGGAGAACATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591743.1
CDS TCA 72 bp GGGCCTCATGGGGGACTCCTACACAGCAGCTCCTGCTaGGCACTTTGGTGGCTGGAATATTCAGGTGTGGTC +
Preference number: 6 (lower is better)
Translates to: GPHGGLLHSSSC*ALWWLEYSGVV
Trigger: GACCACACCTGAATATTCCAGCCACCAAAGTGCTCAGCAGGAGCTGCTGTGTAGGAGTCCCCCATGAGGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587937.1
CDS TCA 72 bp CTTACTCCTGGAGCAGCCTGGTTCCAGAGCCAGCTCTaGTCACCCATCTATGCGGCTCCAAGAAGCCACAGA +
Preference number: 6 (lower is better)
Translates to: LTPGAAWFQSQL*SPIYAAPRSHR
Trigger: TCTGTGGCTTCTTGGAGCCGCATAGATGGGTGATCAGAGCTGGCTCTGGAACCAGGCTGCTCCAGGAGTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411543.6
CDS CCA 72 bp AGACACCTGGAGAGTTTGCAAGGCACTCAAGCAACGTaGAGGCAGAGACGGGTCAGAGGTCAACATTCGGGT +
Preference number: 6 (lower is better)
Translates to: RHLESLQGTQAT*RQRRVRGQHSG
Trigger: ACCCGAATGTTGACCTCTGACCCGTCTCTGCCTCCACGTTGCTTGAGTGCCTTGCAAACTCTCCAGGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586194.1
CDS CAA 90 bp TGCACAGGACAAGACAGTCCGTGTTCTTTGAGACACCTGGAGAGTTaGCAAGGCACTCAAGCAACGTGGAGGCAGAGACGGGTCAGAGGT +
Preference number: 6 (lower is better)
Translates to: CTGQDSPCSLRHLES*QGTQATWRQRRVRG
Trigger: ACCTCTGACCCGTCTCTGCCTCCACGTTGCTTGAGTGCCTTGCAAACTCTCCAGGTGTCTCAAAGAACACGGACTGTCTTGTCCTGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586194.1
CDS CAA 72 bp CAAGACAGTCCGTGTTCTTTGAGACACCTGGAGAGTTaGCAAGGCACTCAAGCAACGTGGAGGCAGAGACGG +
Preference number: 6 (lower is better)
Translates to: QDSPCSLRHLES*QGTQATWRQRR
Trigger: CCGTCTCTGCCTCCACGTTGCTTGAGTGCCTTGCAAACTCTCCAGGTGTCTCAAAGAACACGGACTGTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586194.1
CDS CAA 72 bp GCAGCTCACTGCACAGGACAAGACAGTCCGTGTTCTTaGAGACACCTGGAGAGTTTGCAAGGCACTCAAGCA +
Preference number: 6 (lower is better)
Translates to: AAHCTGQDSPCS*RHLESLQGTQA
Trigger: TGCTTGAGTGCCTTGCAAACTCTCCAGGTGTCTCAAAGAACACGGACTGTCTTGTCCTGTGCAGTGAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586194.1
CDS TCA 72 bp CAGCTCACTGCACAGGACAAGACAGTCCGTGTTCTTTaGGACACCTGGAGAGTTTGCAAGGCACTCAAGCAA +
Preference number: 6 (lower is better)
Translates to: QLTAQDKTVRVL*DTWRVCKALKQ
Trigger: TTGCTTGAGTGCCTTGCAAACTCTCCAGGTGTCTCAAAGAACACGGACTGTCTTGTCCTGTGCAGTGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586194.1
CDS GCA 72 bp CAGCACAAGAGGGACATTACCTTTTTCAACACTGCATaGAAAGACTGGGCTCCTTACTCCTGGAGCAGCCTG +
Preference number: 6 (lower is better)
Translates to: QHKRDITFFNTA*KDWAPYSWSSL
Trigger: CAGGCTGCTCCAGGAGTAAGGAGCCCAGTCTTTGCATGCAGTGTTGAAAAAGGTAATGTCCCTCTTGTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411543.6
CDS CCA 72 bp AGGGACATTACCTTTTTCAACACTGCATGCAAAGACTaGGCTCCTTACTCCTGGAGCAGCCTGGTTCCAGAG +
Preference number: 6 (lower is better)
Translates to: RDITFFNTACKD*APYSWSSLVPE
Trigger: CTCTGGAACCAGGCTGCTCCAGGAGTAAGGAGCCCAGTCTTTGCATGCAGTGTTGAAAAAGGTAATGTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411543.6
CDS CAA 72 bp TCCTGGCCACATCAGCTACCTGCAGCGCACACCTCCTaGAGACACAGTTTGCTCAACTCTGAAATGAAAGAA +
Preference number: 6 (lower is better)
Translates to: SWPHQLPAAHTS*RHSLLNSEMKE
Trigger: TTCTTTCATTTCAGAGTTGAGCAAACTGTGTCTCAAGGAGGTGTGCGCTGCAGGTAGCTGATGTGGCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411543.6
CDS CCA 72 bp TCTAAAATAAAGATGCACACTTCTTTTAAAGACAGGTaGATGGTTCTGGCCCACTCTACCCAACTGAACTTT +
Preference number: 6 (lower is better)
Translates to: SKIKMHTSFKDR*MVLAHSTQLNF
Trigger: AAAGTTCAGTTGGGTAGAGTGGGCCAGAACCATCCACCTGTCTTTAAAAGAAGTGTGCATCTTTATTTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586194.1