RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPHX4 (Homo sapiens)

Ensembl gene IDs: ENSG00000172031

Ensembl transcript IDs: ENST00000370383.5, ENST00000480758.1

Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp ATTGGGAGGCGGCGGCGGGGCCCACTGCCCTTCCTCGGGAGCGGGTaGGCGAGCGCCGCAGCGCGCCAGGCCAGCCCGCCGTCGCCTCTC +
Preference number: 5 (lower is better)
Translates to: IGRRRRGPLPFLGSG*ASAAARQASPPSPL
Trigger: GAGAGGCGACGGCGGGCTGGCCTGGCGCGCTGCGGCGCTCGCTCACCCGCTCCCGAGGAAGGGCAGTGGGCCCCGCCGCCGCCTCCCAAT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370383.5
CDS CCA 90 bp GAGCGTGAGCATCAGGCGGGGCAGGCAATCCCGCAGCCTCGCCATTaGGAGGCGGCGGCGGGGCCCACTGCCCTTCCTCGGGAGCGGGTG +
Preference number: 5 (lower is better)
Translates to: EREHQAGQAIPQPRH*EAAAGPTALPRERV
Trigger: CACCCGCTCCCGAGGAAGGGCAGTGGGCCCCGCCGCCGCCTCCCAATGGCGAGGCTGCGGGATTGCCTGCCCCGCCTGATGCTCACGCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370383.5
CDS GCA 90 bp CTCAGGCACGCGGGAGGGTGCTCCCGGGCGGGCCGCCGGAAGGTCTaGGCCGGCCCCTTGCCGAGGCTCCACAAAAGTTTGAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: LRHAGGCSRAGRRKV*AGPLPRLHKSLSRW
Trigger: CCACCTGCTCAAACTTTTGTGGAGCCTCGGCAAGGGGCCGGCGCAGACCTTCCGGCGGCCCGCCCGGGAGCACCCTCCCGCGTGCCTGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370383.5
CDS TCA 90 bp CGCAGTAGCAGTAGACCAGGGACCAGAAGAGCAGGGACCGGAGCGTaGGCATCAGGCGGGGCAGGCAATCCCGCAGCCTCGCCATTGGGA +
Preference number: 5 (lower is better)
Translates to: RSSSRPGTRRAGTGA*ASGGAGNPAASPLG
Trigger: TCCCAATGGCGAGGCTGCGGGATTGCCTGCCCCGCCTGATGCTCACGCTCCGGTCCCTGCTCTTCTGGTCCCTGGTCTACTGCTACTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370383.5
CDS TCA 90 bp GCCGGAAGGTCTGCGCCGGCCCCTTGCCGAGGCTCCACAAAAGTTTaGGCAGGTGGATGGAGGCGCAGAGCCCGCAGTAGCAGTAGACCA +
Preference number: 5 (lower is better)
Translates to: AGRSAPAPCRGSTKV*AGGWRRRARSSSRP
Trigger: TGGTCTACTGCTACTGCGGGCTCTGCGCCTCCATCCACCTGCTCAAACTTTTGTGGAGCCTCGGCAAGGGGCCGGCGCAGACCTTCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370383.5
CDS TCA 90 bp TCCTCTGTTGTTAATTGGCATCCTTTTCTTCCAATGCCAGTGCTGTaGCTGGTAAACAGATGTTTCAAAACCTTGAAATCATTTATTGAG +
Preference number: 5 (lower is better)
Translates to: SSVVNWHPFLPMPVL*LVNRCFKTLKSFIE
Trigger: CTCAATAAATGATTTCAAGGTTTTGAAACATCTGTTTACCAGTCACAGCACTGGCATTGGAAGAAAAGGATGCCAATTAACAACAGAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370383.5
CDS GCA 72 bp GCAGCCTCGCCATTGGGAGGCGGCGGCGGGGCCCACTaGCCTTCCTCGGGAGCGGGTGAGCGAGCGCCGCAG +
Preference number: 6 (lower is better)
Translates to: AASPLGGGGGAH*PSSGAGERAPQ
Trigger: CTGCGGCGCTCGCTCACCCGCTCCCGAGGAAGGGCAGTGGGCCCCGCCGCCGCCTCCCAATGGCGAGGCTGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370383.5
CDS GCA 72 bp GCGGGAGGGTGCTCCCGGGCGGGCCGCCGGAAGGTCTaGGCCGGCCCCTTGCCGAGGCTCCACAAAAGTTTG +
Preference number: 6 (lower is better)
Translates to: AGGCSRAGRRKV*AGPLPRLHKSL
Trigger: CAAACTTTTGTGGAGCCTCGGCAAGGGGCCGGCGCAGACCTTCCGGCGGCCCGCCCGGGAGCACCCTCCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370383.5
CDS CAA 90 bp GGAGGGTGCTCCCGGGCGGGCCGCCGGAAGGTCTGCGCCGGCCCCTaGCCGAGGCTCCACAAAAGTTTGAGCAGGTGGATGGAGGCGCAG +
Preference number: 6 (lower is better)
Translates to: GGCSRAGRRKVCAGP*PRLHKSLSRWMEAQ
Trigger: CTGCGCCTCCATCCACCTGCTCAAACTTTTGTGGAGCCTCGGCAAGGGGCCGGCGCAGACCTTCCGGCGGCCCGCCCGGGAGCACCCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370383.5
CDS CAA 72 bp TCCCGGGCGGGCCGCCGGAAGGTCTGCGCCGGCCCCTaGCCGAGGCTCCACAAAAGTTTGAGCAGGTGGATG +
Preference number: 6 (lower is better)
Translates to: SRAGRRKVCAGP*PRLHKSLSRWM
Trigger: CATCCACCTGCTCAAACTTTTGTGGAGCCTCGGCAAGGGGCCGGCGCAGACCTTCCGGCGGCCCGCCCGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370383.5
CDS TCA 72 bp TCTGCGCCGGCCCCTTGCCGAGGCTCCACAAAAGTTTaGGCAGGTGGATGGAGGCGCAGAGCCCGCAGTAGC +
Preference number: 6 (lower is better)
Translates to: SAPAPCRGSTKV*AGGWRRRARSS
Trigger: GCTACTGCGGGCTCTGCGCCTCCATCCACCTGCTCAAACTTTTGTGGAGCCTCGGCAAGGGGCCGGCGCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370383.5
CDS TCA 72 bp TCTCCCCACAGTAGTAGTGTTGGAGTGGTCACCATGTaGTGTTTGAGAGGCAGGCAGCTGAAGATATTTCGG +
Preference number: 6 (lower is better)
Translates to: SPHSSSVGVVTM*CLRGRQLKIFR
Trigger: CCGAAATATCTTCAGCTGCCTGCCTCTCAAACATCACATGGTGACCACTCCAACACTACTACTGTGGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370383.5
CDS CCA 72 bp CCAGAATTCTGGAAATCCATGAAGCAGCAGCATAAGTaGTTTGCCTCTTTCTCCAGCAGCAACATAGTGAAA +
Preference number: 6 (lower is better)
Translates to: PEFWKSMKQQHK*FASFSSSNIVK
Trigger: TTTCACTATGTTGCTGCTGGAGAAAGAGGCAAACCACTTATGCTGCTGCTTCATGGATTTCCAGAATTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370383.5
CDS CCA 72 bp AAAAATGGTTATGACCCTATGCCACCGAATCTGGGGTaGTTTGTTCCACAATATTATGTGGTTCTAACTGAT +
Preference number: 6 (lower is better)
Translates to: KNGYDPMPPNLG*FVPQYYVVLTD
Trigger: ATCAGTTAGAACCACATAATATTGTGGAACAAACCACCCCAGATTCGGTGGCATAGGGTCATAACCATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480758.1
CDS TCA 72 bp GTTAATTGGCATCCTTTTCTTCCAATGCCAGTGCTGTaGCTGGTAAACAGATGTTTCAAAACCTTGAAATCA +
Preference number: 6 (lower is better)
Translates to: VNWHPFLPMPVL*LVNRCFKTLKS
Trigger: TGATTTCAAGGTTTTGAAACATCTGTTTACCAGTCACAGCACTGGCATTGGAAGAAAAGGATGCCAATTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370383.5
CDS CAA 72 bp TGCTACAACTCGATATTCACTTTTAAATTCTCTCAGTaGGTAACGCCAAGAATACCAGAATTCTGGAAATCC +
Preference number: 6 (lower is better)
Translates to: CYNSIFTFKFSQ*VTPRIPEFWKS
Trigger: GGATTTCCAGAATTCTGGTATTCTTGGCGTTACCAACTGAGAGAATTTAAAAGTGAATATCGAGTTGTAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370383.5
ENST00000480758.1