RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPHX3 (Homo sapiens)

Ensembl gene IDs: ENSG00000105131

Ensembl transcript IDs: ENST00000221730.8, ENST00000435261.5, ENST00000594042.1, ENST00000602233.5

Found 229 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGAAGGCAGGGACAGGAAGGTCAGGGTTTAAGGTCTGTGCAGCTATaGCAGAGAAGCGACTTTGGCAAAGCGCAGAGTGAGGCCCCAGGA +
Preference number: 1 (lower is better)
Translates to: RRQGQEGQGLRSVQL*QRSDFGKAQSEAPG
Trigger: TCCTGGGGCCTCACTCTGCGCTTTGCCAAAGTCGCTTCTCTGCCATAGCTGCACAGACCTTAAACCCTGACCTTCCTGTCCCTGCCTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
3UTR GCA 90 bp CTGTGTGTGAGTATAGGGGTTGGTGTGTCCCGAGGCACCCATAGGTaGGCTTGTGTGGGATCCAGGAGTCCCATGCCTATGAGCGATTCA +
Preference number: 1 (lower is better)
Translates to: LCVSIGVGVSRGTHR*ACVGSRSPMPMSDS
Trigger: TGAATCGCTCATAGGCATGGGACTCCTGGATCCCACACAAGCGCACCTATGGGTGCCTCGGGACACACCAACCCCTATACTCACACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
3UTR CCA 90 bp AGGAAGGGAGGAGGTGGGACACTCGGTCTCGGCATCTGGCTCCACTaGAAGAGAGGTATACCCAGTTCCCAGGGTCAAAGTGTTTGTTAC +
Preference number: 1 (lower is better)
Translates to: RKGGGGTLGLGIWLH*KRGIPSSQGQSVCY
Trigger: GTAACAAACACTTTGACCCTGGGAACTGGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTCCCACCTCCTCCCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
3UTR TCA 90 bp GCACCCATAGGTGCGCTTGTGTGGGATCCAGGAGTCCCATGCCTATaGGCGATTCAAGAGTTCACCCATGTATGGACATTGTATGGACTC +
Preference number: 1 (lower is better)
Translates to: APIGALVWDPGVPCL*AIQEFTHVWTLYGL
Trigger: GAGTCCATACAATGTCCATACATGGGTGAACTCTTGAATCGCTCATAGGCATGGGACTCCTGGATCCCACACAAGCGCACCTATGGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
3UTR CCA 90 bp ATGCCTATGAGCGATTCAAGAGTTCACCCATGTATGGACATTGTATaGACTCCCAGGCACACACAGATAATGGGTGTGTGTTCCTTCCTG +
Preference number: 1 (lower is better)
Translates to: MPMSDSRVHPCMDIV*TPRHTQIMGVCSFL
Trigger: CAGGAAGGAACACACACCCATTATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACTCTTGAATCGCTCATAGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
3UTR-3UTR GCA 90 bp TCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGGTATACCCAGTTCCCAGGGTCCTTCCTGAGTATCCATaGCTCCTGGGCAGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: SVSASGSTGREVYPVPRVLPEYP*LLGRPA
Trigger: TGCTGGCCTGCCCAGGAGGCATGGATACTCAGGAAG...GACCCTGGGAACTGGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
3UTR-3UTR GCA 90 bp AGGTCTGTGCAGCTATGGCAGAGAAGCGACTTTGGCAAAGCGCAGAGTGAGGCCCTTCCTGAGTATCCATaGCTCCTGGGCAGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: RSVQLWQRSDFGKAQSEALPEYP*LLGRPA
Trigger: TGCTGGCCTGCCCAGGAGGCATGGATACTCAGGAAG...GGCCTCACTCTGCGCTTTGCCAAAGTCGCTTCTCTGCCATAGCTGCACAGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
3UTR-3UTR GCA 90 bp GGAAGGGAGGAGGTGGGACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGACACACATGCATCCATaGCTGTGTGTGAGTATAGGG +
Preference number: 2 (lower is better)
Translates to: GREEVGHSVSASGSTGRETHMHP*LCVSIG
Trigger: CCCTATACTCACACACAGGCATGGATGCATGTGTGT...CTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTCCCACCTCCTCCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
3UTR-3UTR CCA 90 bp GACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGGTATACCCAGTTCCCATGTGAGTATAGGGGTTaGTGTGTCCCGAGGCACCCA +
Preference number: 2 (lower is better)
Translates to: DTRSRHLAPLEERYTQFPCEYRG*CVPRHP
Trigger: TGGGTGCCTCGGGACACACCAACCCCTATACTCACA...TGGGAACTGGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
3UTR-3UTR TCA 90 bp GACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGGTATACCCAGTTCCCAGGAGTCCCATGCCTATaGGCGATTCAAGAGTTCACC +
Preference number: 2 (lower is better)
Translates to: DTRSRHLAPLEERYTQFPGVPCL*AIQEFT
Trigger: GGTGAACTCTTGAATCGCTCATAGGCATGGGACTCC...TGGGAACTGGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
3UTR-3UTR GCA 90 bp TGCGCTTGTGTGGGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGAGTTCACCTTCCTGAGTATCCATaGCTCCTGGGCAGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: CACVGSRSPMPMSDSRVHLPEYP*LLGRPA
Trigger: TGCTGGCCTGCCCAGGAGGCATGGATACTCAGGAAG...GTGAACTCTTGAATCGCTCATAGGCATGGGACTCCTGGATCCCACACAAGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
3UTR-3UTR GCA 90 bp GGAGGTGGGACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGGTATACCCACACACATGCATCCATaGCTGTGTGTGAGTATAGGG +
Preference number: 2 (lower is better)
Translates to: GGGTLGLGIWLHWKRGIPTHMHP*LCVSIG
Trigger: CCCTATACTCACACACAGGCATGGATGCATGTGTGT...GGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTCCCACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
3UTR-3UTR CCA 90 bp TCGAAGGCAGGGACAGGAAGGTCAGGGTTTAAGGTCTGTGCAGCTATGGCAGAGATAGGTGCGCTTGTGTaGGATCCAGGAGTCCCATGC +
Preference number: 2 (lower is better)
Translates to: SKAGTGRSGFKVCAAMAEIGALV*DPGVPC
Trigger: GCATGGGACTCCTGGATCCCACACAAGCGCACCTAT...CTCTGCCATAGCTGCACAGACCTTAAACCCTGACCTTCCTGTCCCTGCCTTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
3UTR-3UTR TCA 90 bp GGGTTTAAGGTCTGTGCAGCTATGGCAGAGAAGCGACTTTGGCAAAGCGCAGAGGTGTGTGTTCCTTCCTaGGTATCCATGCCTCCTGGG +
Preference number: 2 (lower is better)
Translates to: GFKVCAAMAEKRLWQSAEVCVPS*VSMPPG
Trigger: CCCAGGAGGCATGGATACTCAGGAAGGAACACACAC...CTCTGCGCTTTGCCAAAGTCGCTTCTCTGCCATAGCTGCACAGACCTTAAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
3UTR-3UTR TCA 90 bp CATAGGTGCGCTTGTGTGGGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGAGTGTGTGTTCCTTCCTaGGTATCCATGCCTCCTGGG +
Preference number: 2 (lower is better)
Translates to: HRCACVGSRSPMPMSDSRVCVPS*VSMPPG
Trigger: CCCAGGAGGCATGGATACTCAGGAAGGAACACACAC...TCTTGAATCGCTCATAGGCATGGGACTCCTGGATCCCACACAAGCGCACCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
3UTR-3UTR CCA 90 bp AGGTCTGTGCAGCTATGGCAGAGAAGCGACTTTGGCAAAGCGCAGAGTGAGGCCTGTATGGACATTGTATaGACTCCCAGGCACACACAG +
Preference number: 2 (lower is better)
Translates to: RSVQLWQRSDFGKAQSEACMDIV*TPRHTQ
Trigger: CTGTGTGTGCCTGGGAGTCCATACAATGTCCATACA...GGCCTCACTCTGCGCTTTGCCAAAGTCGCTTCTCTGCCATAGCTGCACAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
3UTR-3UTR CCA 90 bp GACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGGTATACCCAGTTCCCATGTATGGACATTGTATaGACTCCCAGGCACACACAG +
Preference number: 2 (lower is better)
Translates to: DTRSRHLAPLEERYTQFPCMDIV*TPRHTQ
Trigger: CTGTGTGTGCCTGGGAGTCCATACAATGTCCATACA...TGGGAACTGGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
3UTR-3UTR TCA 90 bp GCGATTCAAGAGTTCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACGTGTGTGTTCCTTCCTaGGTATCCATGCCTCCTGGG +
Preference number: 2 (lower is better)
Translates to: AIQEFTHVWTLYGLPGTHVCVPS*VSMPPG
Trigger: CCCAGGAGGCATGGATACTCAGGAAGGAACACACAC...GTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACTCTTGAATCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
3UTR-3UTR CCA 90 bp TCGAAGGCAGGGACAGGAAGGTCAGGGTTTAAGGTCTGTGCAGCTATGGCAGAGTGTATGGACATTGTATaGACTCCCAGGCACACACAG +
Preference number: 2 (lower is better)
Translates to: SKAGTGRSGFKVCAAMAECMDIV*TPRHTQ
Trigger: CTGTGTGTGCCTGGGAGTCCATACAATGTCCATACA...CTCTGCCATAGCTGCACAGACCTTAAACCCTGACCTTCCTGTCCCTGCCTTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
3UTR GCA 72 bp AGTATAGGGGTTGGTGTGTCCCGAGGCACCCATAGGTaGGCTTGTGTGGGATCCAGGAGTCCCATGCCTATG +
Preference number: 3 (lower is better)
Translates to: SIGVGVSRGTHR*ACVGSRSPMPM
Trigger: CATAGGCATGGGACTCCTGGATCCCACACAAGCGCACCTATGGGTGCCTCGGGACACACCAACCCCTATACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
3UTR CCA 72 bp GGAGGTGGGACACTCGGTCTCGGCATCTGGCTCCACTaGAAGAGAGGTATACCCAGTTCCCAGGGTCAAAGT +
Preference number: 3 (lower is better)
Translates to: GGGTLGLGIWLH*KRGIPSSQGQS
Trigger: ACTTTGACCCTGGGAACTGGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTCCCACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
3UTR-3UTR CAA 90 bp GGAGGTGGGACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGGTATACCCACCCATGTATGGACATaGTATGGACTCCCAGGCACA +
Preference number: 3 (lower is better)
Translates to: GGGTLGLGIWLHWKRGIPTHVWT*YGLPGT
Trigger: TGTGCCTGGGAGTCCATACAATGTCCATACATGGGT...GGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTCCCACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
3UTR TCA 72 bp GGTGCGCTTGTGTGGGATCCAGGAGTCCCATGCCTATaGGCGATTCAAGAGTTCACCCATGTATGGACATTG +
Preference number: 3 (lower is better)
Translates to: GALVWDPGVPCL*AIQEFTHVWTL
Trigger: CAATGTCCATACATGGGTGAACTCTTGAATCGCTCATAGGCATGGGACTCCTGGATCCCACACAAGCGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
3UTR-3UTR CAA 90 bp AGGTGCGCTTGTGTGGGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGAGTTACCCATGTATGGACATaGTATGGACTCCCAGGCACA +
Preference number: 3 (lower is better)
Translates to: RCACVGSRSPMPMSDSRVTHVWT*YGLPGT
Trigger: TGTGCCTGGGAGTCCATACAATGTCCATACATGGGT...AACTCTTGAATCGCTCATAGGCATGGGACTCCTGGATCCCACACAAGCGCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
3UTR CCA 72 bp AGCGATTCAAGAGTTCACCCATGTATGGACATTGTATaGACTCCCAGGCACACACAGATAATGGGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: SDSRVHPCMDIV*TPRHTQIMGVC
Trigger: ACACACACCCATTATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACTCTTGAATCGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp GGAAGGGAGGAGGTGGGACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGATGCCTGGCAGGATGTaGGCCTCCAAGCGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: GREEVGHSVSASGSTGREMPGRM*ASKRPG
Trigger: GCCGGGCCGCTTGGAGGCCCACATCCTGCCAGGCAT...CTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTCCCACCTCCTCCCTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp GGAGGTGGGACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGGTATACCCGGCCGGCACAGCACGTaGGTGAGCGCTATGCAGCCG +
Preference number: 4 (lower is better)
Translates to: GGGTLGLGIWLHWKRGIPGRHST*VSAMQP
Trigger: CGGCTGCATAGCGCTCACGCACGTGCTGTGCCGGCC...GGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTCCCACCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp GGAAGGGAGGAGGTGGGACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGCCGGCACAAAGCGGCTaGCGATGGCTTCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: GREEVGHSVSASGSTGREPAQSG*RWLPPA
Trigger: GGCTGGTGGAAGCCATCGGCAGCCGCTTTGTGCCGG...CTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTCCCACCTCCTCCCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp GGGTTGGTGTGTCCCGAGGCACCCATAGGTGCGCTTGTGTGGGATCCAGGAGTCCCGGCACAAAGCGGCTaGCGATGGCTTCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: GLVCPEAPIGALVWDPGVPAQSG*RWLPPA
Trigger: GGCTGGTGGAAGCCATCGGCAGCCGCTTTGTGCCGG...GACTCCTGGATCCCACACAAGCGCACCTATGGGTGCCTCGGGACACACCAACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR TCA 90 bp GGAAGGGAGGAGGTGGGACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGTGGCAAAGCGCAGAGTaGGGCCCCAGGAAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GREEVGHSVSASGSTGREWQSAE*GPRKGG
Trigger: TCCTCCCTTCCTGGGGCCTCACTCTGCGCTTTGCCA...CTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTCCCACCTCCTCCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp GTGAGTATAGGGGTTGGTGTGTCCCGAGGCACCCATAGGTGCGCTTGTGTGGGAGGCCGGCACAGCACGTaGGTGAGCGCTATGCAGCCG +
Preference number: 4 (lower is better)
Translates to: VSIGVGVSRGTHRCACVGGRHST*VSAMQP
Trigger: CGGCTGCATAGCGCTCACGCACGTGCTGTGCCGGCC...TCCCACACAAGCGCACCTATGGGTGCCTCGGGACACACCAACCCCTATACTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp GGAGGTGGGACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGGTATACCCCCGGCACAAAGCGGCTaGCGATGGCTTCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: GGGTLGLGIWLHWKRGIPPAQSG*RWLPPA
Trigger: GGCTGGTGGAAGCCATCGGCAGCCGCTTTGTGCCGG...GGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTCCCACCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp GGAAGGGAGGAGGTGGGACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGGAGGGGCGGGGCATATaGAGAGTAGGTGCGGCCTAC +
Preference number: 4 (lower is better)
Translates to: GREEVGHSVSASGSTGREEGRGI*RVGAAY
Trigger: GTAGGCCGCACCTACTCTGCATATGCCCCGCCCCTC...CTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTCCCACCTCCTCCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435261.5
CDS-3UTR GCA 90 bp GGGTTGGTGTGTCCCGAGGCACCCATAGGTGCGCTTGTGTGGGATCCAGGAGTCCGAGGCACCCATAGGTaGGCTTGTGTGGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: GLVCPEAPIGALVWDPGVRGTHR*ACVGSR
Trigger: CCTGGATCCCACACAAGCGCACCTATGGGTGCCTCG...GACTCCTGGATCCCACACAAGCGCACCTATGGGTGCCTCGGGACACACCAACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp GGGACAGGAAGGTCAGGGTTTAAGGTCTGTGCAGCTATGGCAGAGAAGCGACTTCCATCGCCCTTGGCCTaGGGCCCCTCCGTGCCGTCG +
Preference number: 4 (lower is better)
Translates to: GTGRSGFKVCAAMAEKRLPSPLA*GPSVPS
Trigger: CGACGGCACGGAGGGGCCCCAGGCCAAGGGCGATGG...AAGTCGCTTCTCTGCCATAGCTGCACAGACCTTAAACCCTGACCTTCCTGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221730.8
CDS-3UTR CCA 90 bp GGAAGGGAGGAGGTGGGACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGCAGGAAGGGAGGAGGTaGGACACTCGGTCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: GREEVGHSVSASGSTGREQEGRR*DTRSRH
Trigger: ATGCCGAGACCGAGTGTCCCACCTCCTCCCTTCCTG...CTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTCCCACCTCCTCCCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR TCA 90 bp GGGTTGGTGTGTCCCGAGGCACCCATAGGTGCGCTTGTGTGGGATCCAGGAGTCCGTGCAGAAACAGCATaGGGGGTCCGTTACCTCGTC +
Preference number: 4 (lower is better)
Translates to: GLVCPEAPIGALVWDPGVRAETA*GVRYLV
Trigger: GACGAGGTAACGGACCCCTCATGCTGTTTCTGCACG...GACTCCTGGATCCCACACAAGCGCACCTATGGGTGCCTCGGGACACACCAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp GGGTTGGTGTGTCCCGAGGCACCCATAGGTGCGCTTGTGTGGGATCCAGGAGTCCTTCCTGAGTATCCATaGCTCCTGGGCAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GLVCPEAPIGALVWDPGVLPEYP*LLGRPA
Trigger: TGCTGGCCTGCCCAGGAGGCATGGATACTCAGGAAG...GACTCCTGGATCCCACACAAGCGCACCTATGGGTGCCTCGGGACACACCAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp TCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGGTATACCCAGTTCCCAGGGTCAGGCCTCGAGCTCGCTaGGGGTCAAGCATGGGATGC +
Preference number: 4 (lower is better)
Translates to: SVSASGSTGREVYPVPRVRPRAR*GSSMGC
Trigger: GCATCCCATGCTTGACCCCCAGCGAGCTCGAGGCCT...GACCCTGGGAACTGGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp AGGTGGGACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGGTATACCCAGCAAAGCGGCTGCCGATaGCTTCCACCAGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: RWDTRSRHLAPLEERYTQQSGCR*LPPAPA
Trigger: AGCTGGGGCTGGTGGAAGCCATCGGCAGCCGCTTTG...CTGGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTCCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp GGGTTGGTGTGTCCCGAGGCACCCATAGGTGCGCTTGTGTGGGATCCAGGAGTCCTGGGGGTTGCTCTGTaGGATCCAATGCCCTATGCC +
Preference number: 4 (lower is better)
Translates to: GLVCPEAPIGALVWDPGVLGVAL*DPMPYA
Trigger: GGCATAGGGCATTGGATCCCACAGAGCAACCCCCAG...GACTCCTGGATCCCACACAAGCGCACCTATGGGTGCCTCGGGACACACCAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR TCA 90 bp GGAGGTGGGACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGGTATACCCCGTGCAGAAACAGCATaGGGGGTCCGTTACCTCGTC +
Preference number: 4 (lower is better)
Translates to: GGGTLGLGIWLHWKRGIPRAETA*GVRYLV
Trigger: GACGAGGTAACGGACCCCTCATGCTGTTTCTGCACG...GGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTCCCACCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp TGCGCTTGTGTGGGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGAGTTCACCCTGGGGCCCCTCCGTaGCGTCGGGATTTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: CACVGSRSPMPMSDSRVHPGAPP*RRDLWD
Trigger: GTCCCACAAATCCCGACGGCACGGAGGGGCCCCAGG...GTGAACTCTTGAATCGCTCATAGGCATGGGACTCCTGGATCCCACACAAGCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221730.8
CDS-3UTR GCA 90 bp GGAAGGGAGGAGGTGGGACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGCTCTGTGGGATCCAATaGCCTATGCCTGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: GREEVGHSVSASGSTGRELCGIQ*PMPGRM
Trigger: CATCCTGCCAGGCATAGGGCATTGGATCCCACAGAG...CTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTCCCACCTCCTCCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp AGGTGGGACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGGTATACCCAGGCTGGGGGTCAAGCATaGGATGCCTGTCTTGCGGTG +
Preference number: 4 (lower is better)
Translates to: RWDTRSRHLAPLEERYTQAGGQA*DACLAV
Trigger: CACCGCAAGACAGGCATCCCATGCTTGACCCCCAGC...CTGGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTCCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp AGGTGGGACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGGTATACCCAGGGTGTGGTCAGCTCCTaGGGTTCCAGGGGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: RWDTRSRHLAPLEERYTQGVVSS*GSRGKF
Trigger: GAACTTCCCCCTGGAACCCCAGGAGCTGACCACACC...CTGGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTCCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp GGGACAGGAAGGTCAGGGTTTAAGGTCTGTGCAGCTATGGCAGAGAAGCGACTTATGCCTGGCAGGATGTaGGCCTCCAAGCGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: GTGRSGFKVCAAMAEKRLMPGRM*ASKRPG
Trigger: GCCGGGCCGCTTGGAGGCCCACATCCTGCCAGGCAT...AAGTCGCTTCTCTGCCATAGCTGCACAGACCTTAAACCCTGACCTTCCTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp GGAAGGGAGGAGGTGGGACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGTTCTCAGGGAAGCCGTaGAGAAACAGCATGAGGGGT +
Preference number: 4 (lower is better)
Translates to: GREEVGHSVSASGSTGREFSGKP*RNSMRG
Trigger: ACCCCTCATGCTGTTTCTGCACGGCTTCCCTGAGAA...CTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTCCCACCTCCTCCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp GGAGGTGGGACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGGTATACCCCATGGGCCACAAGGATaGACTTCGAGTAACCCAGGC +
Preference number: 4 (lower is better)
Translates to: GGGTLGLGIWLHWKRGIPHGPQG*TSSNPG
Trigger: GCCTGGGTTACTCGAAGTGCATCCTTGTGGCCCATG...GGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTCCCACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp AGGTGGGACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGGTATACCCAGGCATCTCCTGGGGGTTaGTCTGTGGGATCCAATGCC +
Preference number: 4 (lower is better)
Translates to: RWDTRSRHLAPLEERYTQASPGG*SVGSNA
Trigger: GGCATTGGATCCCACAGAGCAACCCCCAGGAGATGC...CTGGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTCCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp AGGTGGGACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGGTATACCCAGGCCCACATGTACTGGTaGATCTCCTGGGGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: RWDTRSRHLAPLEERYTQAHMYW*ISWGLL
Trigger: GAGCAACCCCCAGGAGATGCACCAGTACATGTGGGC...CTGGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTCCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp GACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGGTATACCCAGTTCCCAGGTGTGGTCAGCTCCTaGGGTTCCAGGGGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: DTRSRHLAPLEERYTQFPGVVSS*GSRGKF
Trigger: GAACTTCCCCCTGGAACCCCAGGAGCTGACCACACC...TGGGAACTGGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp GGGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGAGTTCACCCATGTATGGAATGCCTGGCAGGATGTaGGCCTCCAAGCGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: GIQESHAYERFKSSPMYGMPGRM*ASKRPG
Trigger: GCCGGGCCGCTTGGAGGCCCACATCCTGCCAGGCAT...TCCATACATGGGTGAACTCTTGAATCGCTCATAGGCATGGGACTCCTGGATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp GGGTTGGTGTGTCCCGAGGCACCCATAGGTGCGCTTGTGTGGGATCCAGGAGTCGGATCTTCAGTTAAGTaGGCGACACCTGGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: GLVCPEAPIGALVWDPGVGSSVK*ATPGVR
Trigger: CCTCACTCCAGGTGTCGCCCACTTAACTGAAGATCC...GACTCCTGGATCCCACACAAGCGCACCTATGGGTGCCTCGGGACACACCAACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435261.5
ENST00000602233.5
CDS-3UTR TCA 90 bp ATGCATCCATGCCTGTGTGTGAGTATAGGGGTTGGTGTGTCCCGAGGCACCCATACATGGGGGCACCACTaGCCACAACCATCCGCTCGA +
Preference number: 4 (lower is better)
Translates to: MHPCLCVSIGVGVSRGTHTWGHH*PQPSAR
Trigger: TCGAGCGGATGGTTGTGGTCAGTGGTGCCCCCATGT...ATGGGTGCCTCGGGACACACCAACCCCTATACTCACACACAGGCATGGATGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR TCA 90 bp CATAGGTGCGCTTGTGTGGGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGATGGCAAAGCGCAGAGTaGGGCCCCAGGAAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: HRCACVGSRSPMPMSDSRWQSAE*GPRKGG
Trigger: TCCTCCCTTCCTGGGGCCTCACTCTGCGCTTTGCCA...TCTTGAATCGCTCATAGGCATGGGACTCCTGGATCCCACACAAGCGCACCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp AGGTCTGTGCAGCTATGGCAGAGAAGCGACTTTGGCAAAGCGCAGAGTGAGGCCCACCACTCACCTGAGTaGCAGGTAAACACCTGGGCG +
Preference number: 4 (lower is better)
Translates to: RSVQLWQRSDFGKAQSEAHHSPE*QVNTWA
Trigger: CGCCCAGGTGTTTACCTGGCACTCAGGTGAGTGGTG...GGCCTCACTCTGCGCTTTGCCAAAGTCGCTTCTCTGCCATAGCTGCACAGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000221730.8
CDS-3UTR GCA 90 bp ACACATGCATCCATGCCTGTGTGTGAGTATAGGGGTTGGTGTGTCCCGAGGCACAGGTTCAGGAAACCGTaGTCACCCAGCGAGGGGTCG +
Preference number: 4 (lower is better)
Translates to: THASMPVCEYRGWCVPRHRFRKP*SPSEGS
Trigger: CGACCCCTCGCTGGGTGAGCACGGTTTCCTGAACCT...GTGCCTCGGGACACACCAACCCCTATACTCACACACAGGCATGGATGCATGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp GACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGGTATACCCAGTTCCCAGCCCACATGTACTGGTaGATCTCCTGGGGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: DTRSRHLAPLEERYTQFPAHMYW*ISWGLL
Trigger: GAGCAACCCCCAGGAGATGCACCAGTACATGTGGGC...TGGGAACTGGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp ATGCATCCATGCCTGTGTGTGAGTATAGGGGTTGGTGTGTCCCGAGGCACCCATCGAGGCACCCATAGGTaGGCTTGTGTGGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: MHPCLCVSIGVGVSRGTHRGTHR*ACVGSR
Trigger: CCTGGATCCCACACAAGCGCACCTATGGGTGCCTCG...ATGGGTGCCTCGGGACACACCAACCCCTATACTCACACACAGGCATGGATGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp GGGACAGGAAGGTCAGGGTTTAAGGTCTGTGCAGCTATGGCAGAGAAGCGACTTAGGCCTCGAGCTCGCTaGGGGTCAAGCATGGGATGC +
Preference number: 4 (lower is better)
Translates to: GTGRSGFKVCAAMAEKRLRPRAR*GSSMGC
Trigger: GCATCCCATGCTTGACCCCCAGCGAGCTCGAGGCCT...AAGTCGCTTCTCTGCCATAGCTGCACAGACCTTAAACCCTGACCTTCCTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp AGGTCTGTGCAGCTATGGCAGAGAAGCGACTTTGGCAAAGCGCAGAGTGAGGCCCCAATGCCCTATGCCTaGCAGGATGTGGGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: RSVQLWQRSDFGKAQSEAPMPYA*QDVGLQ
Trigger: TTGGAGGCCCACATCCTGCCAGGCATAGGGCATTGG...GGCCTCACTCTGCGCTTTGCCAAAGTCGCTTCTCTGCCATAGCTGCACAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp AGGTCTGTGCAGCTATGGCAGAGAAGCGACTTTGGCAAAGCGCAGAGTGAGGCCCTGGGGGTTGCTCTGTaGGATCCAATGCCCTATGCC +
Preference number: 4 (lower is better)
Translates to: RSVQLWQRSDFGKAQSEALGVAL*DPMPYA
Trigger: GGCATAGGGCATTGGATCCCACAGAGCAACCCCCAG...GGCCTCACTCTGCGCTTTGCCAAAGTCGCTTCTCTGCCATAGCTGCACAGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp GGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGAGTTCACCCATGTATGGACGTCCACATCCCGAGGTaGATCCGAGGGGCCATAGCC +
Preference number: 4 (lower is better)
Translates to: GSRSPMPMSDSRVHPCMDVHIPR*IRGAIA
Trigger: GGCTATGGCCCCTCGGATGCACCTCGGGATGTGGAC...GTCCATACATGGGTGAACTCTTGAATCGCTCATAGGCATGGGACTCCTGGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp GACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGGTATACCCAGTTCCCACTCTGTGGGATCCAATaGCCTATGCCTGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: DTRSRHLAPLEERYTQFPLCGIQ*PMPGRM
Trigger: CATCCTGCCAGGCATAGGGCATTGGATCCCACAGAG...TGGGAACTGGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp GGGTTTAAGGTCTGTGCAGCTATGGCAGAGAAGCGACTTTGGCAAAGCGCAGAGCGAGGCACCCATAGGTaGGCTTGTGTGGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: GFKVCAAMAEKRLWQSAERGTHR*ACVGSR
Trigger: CCTGGATCCCACACAAGCGCACCTATGGGTGCCTCG...CTCTGCGCTTTGCCAAAGTCGCTTCTCTGCCATAGCTGCACAGACCTTAAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp CATTGTATGGACTCCCAGGCACACACAGATAATGGGTGTGTGTTCCTTCCTGAGCATATGCAGAGTAGGTaGGGCCCAGGGGCGCGCGAC +
Preference number: 4 (lower is better)
Translates to: HCMDSQAHTDNGCVFLPEHMQSR*GPGARD
Trigger: GTCGCGCGCCCCTGGGCCGCACCTACTCTGCATATG...CTCAGGAAGGAACACACACCCATTATCTGTGTGTGCCTGGGAGTCCATACAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602233.5
CDS-3UTR GCA 90 bp TGGACTCCCAGGCACACACAGATAATGGGTGTGTGTTCCTTCCTGAGTATCCATGAGGGGCGGGGCATATaGAGAGTAGGTGCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: WTPRHTQIMGVCSFLSIHEGRGI*RVGAAQ
Trigger: CTGGGCCGCACCTACTCTGCATATGCCCCGCCCCTC...ATGGATACTCAGGAAGGAACACACACCCATTATCTGTGTGTGCCTGGGAGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602233.5
CDS-3UTR CCA 90 bp GACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGGTATACCCAGTTCCCATCCACAGCCACAACATaGAAGCGGCTCTGGAACTCC +
Preference number: 4 (lower is better)
Translates to: DTRSRHLAPLEERYTQFPSTATT*KRLWNS
Trigger: GGAGTTCCAGAGCCGCTTCCATGTTGTGGCTGTGGA...TGGGAACTGGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp ACACATGCATCCATGCCTGTGTGTGAGTATAGGGGTTGGTGTGTCCCGAGGCACAGGGCACCCCAGTCATaGGCCACAAGGATGCACTTC +
Preference number: 4 (lower is better)
Translates to: THASMPVCEYRGWCVPRHRAPQS*ATRMHF
Trigger: GAAGTGCATCCTTGTGGCCCATGACTGGGGTGCCCT...GTGCCTCGGGACACACCAACCCCTATACTCACACACAGGCATGGATGCATGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp GTGAGTATAGGGGTTGGTGTGTCCCGAGGCACCCATAGGTGCGCTTGTGTGGGACCGCTCGACCAGGGATaGGTAGTAGATGGAGAAATG +
Preference number: 4 (lower is better)
Translates to: VSIGVGVSRGTHRCACVGPLDQG*VVDGEM
Trigger: CATTTCTCCATCTACTACCCATCCCTGGTCGAGCGG...TCCCACACAAGCGCACCTATGGGTGCCTCGGGACACACCAACCCCTATACTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp AGGTGGGACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGGTATACCCAGTGGGAACGGAAGAACTaGCTGATGTGGTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: RWDTRSRHLAPLEERYTQWERKN*LMWCRE
Trigger: TTCCCTGCACCACATCAGCCAGTTCTTCCGTTCCCA...CTGGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTCCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp AGGTGCGCTTGTGTGGGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGAGTTGGTGTGGTCAGCTCCTaGGGTTCCAGGGGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: RCACVGSRSPMPMSDSRVGVVSS*GSRGKF
Trigger: GAACTTCCCCCTGGAACCCCAGGAGCTGACCACACC...AACTCTTGAATCGCTCATAGGCATGGGACTCCTGGATCCCACACAAGCGCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp ACACATGCATCCATGCCTGTGTGTGAGTATAGGGGTTGGTGTGTCCCGAGGCACGCAGCAATGTGGGTGTaGTCAGCTCCTGGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: THASMPVCEYRGWCVPRHAAMWV*SAPGVP
Trigger: TGGAACCCCAGGAGCTGACCACACCCACATTGCTGC...GTGCCTCGGGACACACCAACCCCTATACTCACACACAGGCATGGATGCATGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp GACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGGTATACCCAGTTCCCAATAGGTGCGCTTGTGTaGGATCCAGGAGTCCCATGC +
Preference number: 4 (lower is better)
Translates to: DTRSRHLAPLEERYTQFPIGALV*DPGVPC
Trigger: GCATGGGACTCCTGGATCCCACACAAGCGCACCTAT...TGGGAACTGGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp GTGAGTATAGGGGTTGGTGTGTCCCGAGGCACCCATAGGTGCGCTTGTGTGGGAGGCATCTGGCTCCACTaGAAGAGAGGTATACCCAGT +
Preference number: 4 (lower is better)
Translates to: VSIGVGVSRGTHRCACVGGIWLH*KRGIPS
Trigger: ACTGGGTATACCTCTCTTCCAGTGGAGCCAGATGCC...TCCCACACAAGCGCACCTATGGGTGCCTCGGGACACACCAACCCCTATACTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp TCGAAGGCAGGGACAGGAAGGTCAGGGTTTAAGGTCTGTGCAGCTATGGCAGAGCTCGGTCTCGGCATCTaGCTCCACTGGAAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: SKAGTGRSGFKVCAAMAELGLGI*LHWKRG
Trigger: ACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAG...CTCTGCCATAGCTGCACAGACCTTAAACCCTGACCTTCCTGTCCCTGCCTTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp GGGACAGGAAGGTCAGGGTTTAAGGTCTGTGCAGCTATGGCAGAGAAGCGACTTCAGGAAGGGAGGAGGTaGGACACTCGGTCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: GTGRSGFKVCAAMAEKRLQEGRR*DTRSRH
Trigger: ATGCCGAGACCGAGTGTCCCACCTCCTCCCTTCCTG...AAGTCGCTTCTCTGCCATAGCTGCACAGACCTTAAACCCTGACCTTCCTGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR TCA 90 bp GCGATTCAAGAGTTCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACGGCACAGCACGTGCGTaGGCGCTATGCAGCCGTAGA +
Preference number: 4 (lower is better)
Translates to: AIQEFTHVWTLYGLPGTHGTARA*ALCSRR
Trigger: TCTACGGCTGCATAGCGCTCACGCACGTGCTGTGCC...GTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACTCTTGAATCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR TCA 90 bp GAGCGATTCAAGAGTTCACCCATGTATGGACATTGTATGGACTCCCAGGCACACGGCACAGCACGTGCGTaGGCGCTATGCAGCCGTAGA +
Preference number: 4 (lower is better)
Translates to: ERFKSSPMYGHCMDSQAHGTARA*ALCSRR
Trigger: TCTACGGCTGCATAGCGCTCACGCACGTGCTGTGCC...GTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACTCTTGAATCGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR TCA 90 bp ACACATGCATCCATGCCTGTGTGTGAGTATAGGGGTTGGTGTGTCCCGAGGCACGTGTGTGTTCCTTCCTaGGTATCCATGCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: THASMPVCEYRGWCVPRHVCVPS*VSMPPG
Trigger: CCCAGGAGGCATGGATACTCAGGAAGGAACACACAC...GTGCCTCGGGACACACCAACCCCTATACTCACACACAGGCATGGATGCATGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp TTCAAGAGTTCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACAGATGGCCGGCACAGCACGTaGGTGAGCGCTATGCAGCCG +
Preference number: 4 (lower is better)
Translates to: FKSSPMYGHCMDSQAHTDGRHST*VSAMQP
Trigger: CGGCTGCATAGCGCTCACGCACGTGCTGTGCCGGCC...ATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACTCTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp TGTGGGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGAGTTCACCCATGTATGTCCACATCCCGAGGTaGATCCGAGGGGCCATAGCC +
Preference number: 4 (lower is better)
Translates to: CGIQESHAYERFKSSPMYVHIPR*IRGAIA
Trigger: GGCTATGGCCCCTCGGATGCACCTCGGGATGTGGAC...ATACATGGGTGAACTCTTGAATCGCTCATAGGCATGGGACTCCTGGATCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp CATAGGTGCGCTTGTGTGGGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGATGCCGTCGGGATTTGTaGGACGCGCTGAAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: HRCACVGSRSPMPMSDSRCRRDL*DALKEE
Trigger: CTCTTCCTTCAGCGCGTCCCACAAATCCCGACGGCA...TCTTGAATCGCTCATAGGCATGGGACTCCTGGATCCCACACAAGCGCACCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000221730.8
CDS-3UTR CCA 90 bp GGGACAGGAAGGTCAGGGTTTAAGGTCTGTGCAGCTATGGCAGAGAAGCGACTTAGGGCACCCCAGTCATaGGCCACAAGGATGCACTTC +
Preference number: 4 (lower is better)
Translates to: GTGRSGFKVCAAMAEKRLRAPQS*ATRMHF
Trigger: GAAGTGCATCCTTGTGGCCCATGACTGGGGTGCCCT...AAGTCGCTTCTCTGCCATAGCTGCACAGACCTTAAACCCTGACCTTCCTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp GCGATTCAAGAGTTCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACCAAAGCGGCTGCCGATaGCTTCCACCAGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: AIQEFTHVWTLYGLPGTHQSGCR*LPPAPA
Trigger: AGCTGGGGCTGGTGGAAGCCATCGGCAGCCGCTTTG...GTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACTCTTGAATCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp GGGTTTAAGGTCTGTGCAGCTATGGCAGAGAAGCGACTTTGGCAAAGCGCAGAGCCAATGCCCTATGCCTaGCAGGATGTGGGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: GFKVCAAMAEKRLWQSAEPMPYA*QDVGLQ
Trigger: TTGGAGGCCCACATCCTGCCAGGCATAGGGCATTGG...CTCTGCGCTTTGCCAAAGTCGCTTCTCTGCCATAGCTGCACAGACCTTAAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp GGGTTTAAGGTCTGTGCAGCTATGGCAGAGAAGCGACTTTGGCAAAGCGCAGAGCTGGGGGTTGCTCTGTaGGATCCAATGCCCTATGCC +
Preference number: 4 (lower is better)
Translates to: GFKVCAAMAEKRLWQSAELGVAL*DPMPYA
Trigger: GGCATAGGGCATTGGATCCCACAGAGCAACCCCCAG...CTCTGCGCTTTGCCAAAGTCGCTTCTCTGCCATAGCTGCACAGACCTTAAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp TCGAAGGCAGGGACAGGAAGGTCAGGGTTTAAGGTCTGTGCAGCTATGGCAGAGTGTGAGTATAGGGGTTaGTGTGTCCCGAGGCACCCA +
Preference number: 4 (lower is better)
Translates to: SKAGTGRSGFKVCAAMAECEYRG*CVPRHP
Trigger: TGGGTGCCTCGGGACACACCAACCCCTATACTCACA...CTCTGCCATAGCTGCACAGACCTTAAACCCTGACCTTCCTGTCCCTGCCTTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp CATAGGTGCGCTTGTGTGGGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGACTCGGTCTCGGCATCTaGCTCCACTGGAAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: HRCACVGSRSPMPMSDSRLGLGI*LHWKRG
Trigger: ACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAG...TCTTGAATCGCTCATAGGCATGGGACTCCTGGATCCCACACAAGCGCACCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp AGGTGCGCTTGTGTGGGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGAGTTCTCGGTCTCGGCATCTaGCTCCACTGGAAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: RCACVGSRSPMPMSDSRVLGLGI*LHWKRG
Trigger: ACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAG...AACTCTTGAATCGCTCATAGGCATGGGACTCCTGGATCCCACACAAGCGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp AGGTCTGTGCAGCTATGGCAGAGAAGCGACTTTGGCAAAGCGCAGAGTGAGGCCAGGTCTGTGCAGCTATaGCAGAGAAGCGACTTTGGC +
Preference number: 4 (lower is better)
Translates to: RSVQLWQRSDFGKAQSEARSVQL*QRSDFG
Trigger: GCCAAAGTCGCTTCTCTGCCATAGCTGCACAGACCT...GGCCTCACTCTGCGCTTTGCCAAAGTCGCTTCTCTGCCATAGCTGCACAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp GGGTTTAAGGTCTGTGCAGCTATGGCAGAGAAGCGACTTTGGCAAAGCGCAGAGACCCTCCCTTCGGTCTaGCTCCAAAGACCTAGCAGC +
Preference number: 4 (lower is better)
Translates to: GFKVCAAMAEKRLWQSAETLPSV*LQRPSS
Trigger: GCTGCTAGGTCTTTGGAGCCAGACCGAAGGGAGGGT...CTCTGCGCTTTGCCAAAGTCGCTTCTCTGCCATAGCTGCACAGACCTTAAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602233.5
CDS-3UTR TCA 90 bp CATTGTATGGACTCCCAGGCACACACAGATAATGGGTGTGTGTTCCTTCCTGAGACACCAGGCTCCACATaGAGGCGCGCAGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: HCMDSQAHTDNGCVFLPETPGST*RRAAAS
Trigger: TGAAGCTGCTGCGCGCCTTCATGTGGAGCCTGGTGT...CTCAGGAAGGAACACACACCCATTATCTGTGTGTGCCTGGGAGTCCATACAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR TCA 90 bp GAGCGATTCAAGAGTTCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACATGGGGGCACCACTaGCCACAACCATCCGCTCGA +
Preference number: 4 (lower is better)
Translates to: ERFKSSPMYGHCMDSQAHTWGHH*PQPSAR
Trigger: TCGAGCGGATGGTTGTGGTCAGTGGTGCCCCCATGT...GTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACTCTTGAATCGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR TCA 90 bp GGAGGTGGGACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGGTATACCCGTGGTCTTCAGAATCTaGAAGTCAGACATAGACAGC +
Preference number: 4 (lower is better)
Translates to: GGGTLGLGIWLHWKRGIPVVFRI*KSDIDS
Trigger: GCTGTCTATGTCTGACTTTCAGATTCTGAAGACCAC...GGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTCCCACCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp ATGCATCCATGCCTGTGTGTGAGTATAGGGGTTGGTGTGTCCCGAGGCACCCATTTCTCAGGGAAGCCGTaGAGAAACAGCATGAGGGGT +
Preference number: 4 (lower is better)
Translates to: MHPCLCVSIGVGVSRGTHFSGKP*RNSMRG
Trigger: ACCCCTCATGCTGTTTCTGCACGGCTTCCCTGAGAA...ATGGGTGCCTCGGGACACACCAACCCCTATACTCACACACAGGCATGGATGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp TCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACAGATAATGGGTGTGTCCACATCCCGAGGTaGATCCGAGGGGCCATAGCC +
Preference number: 4 (lower is better)
Translates to: SPMYGHCMDSQAHTDNGCVHIPR*IRGAIA
Trigger: GGCTATGGCCCCTCGGATGCACCTCGGGATGTGGAC...ACACCCATTATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp TGCGCTTGTGTGGGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGAGTTCACCATGGGCCACAAGGATaGACTTCGAGTAACCCAGGC +
Preference number: 4 (lower is better)
Translates to: CACVGSRSPMPMSDSRVHHGPQG*TSSNPG
Trigger: GCCTGGGTTACTCGAAGTGCATCCTTGTGGCCCATG...GTGAACTCTTGAATCGCTCATAGGCATGGGACTCCTGGATCCCACACAAGCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp GGGACAGGAAGGTCAGGGTTTAAGGTCTGTGCAGCTATGGCAGAGAAGCGACTTCTCTGTGGGATCCAATaGCCTATGCCTGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: GTGRSGFKVCAAMAEKRLLCGIQ*PMPGRM
Trigger: CATCCTGCCAGGCATAGGGCATTGGATCCCACAGAG...AAGTCGCTTCTCTGCCATAGCTGCACAGACCTTAAACCCTGACCTTCCTGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp GGGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGAGTTCACCCATGTATGGAGCCCACATGTACTGGTaGATCTCCTGGGGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: GIQESHAYERFKSSPMYGAHMYW*ISWGLL
Trigger: GAGCAACCCCCAGGAGATGCACCAGTACATGTGGGC...TCCATACATGGGTGAACTCTTGAATCGCTCATAGGCATGGGACTCCTGGATCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp CATTGTATGGACTCCCAGGCACACACAGATAATGGGTGTGTGTTCCTTCCTGAGGCTGGGGGTCAAGCATaGGATGCCTGTCTTGCGGTG +
Preference number: 4 (lower is better)
Translates to: HCMDSQAHTDNGCVFLPEAGGQA*DACLAV
Trigger: CACCGCAAGACAGGCATCCCATGCTTGACCCCCAGC...CTCAGGAAGGAACACACACCCATTATCTGTGTGTGCCTGGGAGTCCATACAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp AGTTCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACAGATAATGGGCAAAGCGGCTGCCGATaGCTTCCACCAGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SSPMYGHCMDSQAHTDNGQSGCR*LPPAPA
Trigger: AGCTGGGGCTGGTGGAAGCCATCGGCAGCCGCTTTG...CCCATTATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp GGGTTTAAGGTCTGTGCAGCTATGGCAGAGAAGCGACTTTGGCAAAGCGCAGAGTACTGGTGCATCTCCTaGGGGTTGCTCTGTGGGATC +
Preference number: 4 (lower is better)
Translates to: GFKVCAAMAEKRLWQSAEYWCIS*GLLCGI
Trigger: GATCCCACAGAGCAACCCCCAGGAGATGCACCAGTA...CTCTGCGCTTTGCCAAAGTCGCTTCTCTGCCATAGCTGCACAGACCTTAAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp AGGTGCGCTTGTGTGGGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGAGTTTACTGGTGCATCTCCTaGGGGTTGCTCTGTGGGATC +
Preference number: 4 (lower is better)
Translates to: RCACVGSRSPMPMSDSRVYWCIS*GLLCGI
Trigger: GATCCCACAGAGCAACCCCCAGGAGATGCACCAGTA...AACTCTTGAATCGCTCATAGGCATGGGACTCCTGGATCCCACACAAGCGCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp GGGTTTAAGGTCTGTGCAGCTATGGCAGAGAAGCGACTTTGGCAAAGCGCAGAGAAGGCCCACATGTACTaGTGCATCTCCTGGGGGTTG +
Preference number: 4 (lower is better)
Translates to: GFKVCAAMAEKRLWQSAEKAHMY*CISWGL
Trigger: CAACCCCCAGGAGATGCACCAGTACATGTGGGCCTT...CTCTGCGCTTTGCCAAAGTCGCTTCTCTGCCATAGCTGCACAGACCTTAAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp TGCGCTTGTGTGGGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGAGTTCACAAGGCCCACATGTACTaGTGCATCTCCTGGGGGTTG +
Preference number: 4 (lower is better)
Translates to: CACVGSRSPMPMSDSRVHKAHMY*CISWGL
Trigger: CAACCCCCAGGAGATGCACCAGTACATGTGGGCCTT...GTGAACTCTTGAATCGCTCATAGGCATGGGACTCCTGGATCCCACACAAGCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp AGGTGGGACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGGTATACCCAGTGTATGGACATTGTATaGACTCCCAGGCACACACAG +
Preference number: 4 (lower is better)
Translates to: RWDTRSRHLAPLEERYTQCMDIV*TPRHTQ
Trigger: CTGTGTGTGCCTGGGAGTCCATACAATGTCCATACA...CTGGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTCCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp AGGTGCGCTTGTGTGGGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGAGTTATAGGTGCGCTTGTGTaGGATCCAGGAGTCCCATGC +
Preference number: 4 (lower is better)
Translates to: RCACVGSRSPMPMSDSRVIGALV*DPGVPC
Trigger: GCATGGGACTCCTGGATCCCACACAAGCGCACCTAT...AACTCTTGAATCGCTCATAGGCATGGGACTCCTGGATCCCACACAAGCGCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp AGGTGCGCTTGTGTGGGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGAGTTTGTGAGTATAGGGGTTaGTGTGTCCCGAGGCACCCA +
Preference number: 4 (lower is better)
Translates to: RCACVGSRSPMPMSDSRVCEYRG*CVPRHP
Trigger: TGGGTGCCTCGGGACACACCAACCCCTATACTCACA...AACTCTTGAATCGCTCATAGGCATGGGACTCCTGGATCCCACACAAGCGCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp ATGCATCCATGCCTGTGTGTGAGTATAGGGGTTGGTGTGTCCCGAGGCACCCATGGATCTTCAGTTAAGTaGGCGACACCTGGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: MHPCLCVSIGVGVSRGTHGSSVK*ATPGVR
Trigger: CCTCACTCCAGGTGTCGCCCACTTAACTGAAGATCC...ATGGGTGCCTCGGGACACACCAACCCCTATACTCACACACAGGCATGGATGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435261.5
ENST00000602233.5
CDS-3UTR TCA 90 bp CACCCATGTATGGACATTGTATGGACTCCCAGGCACACACAGATAATGGGTGTGCGTGCAGAAACAGCATaGGGGGTCCGTTACCTCGTC +
Preference number: 4 (lower is better)
Translates to: HPCMDIVWTPRHTQIMGVRAETA*GVRYLV
Trigger: GACGAGGTAACGGACCCCTCATGCTGTTTCTGCACG...CACACCCATTATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR TCA 90 bp ACACATGCATCCATGCCTGTGTGTGAGTATAGGGGTTGGTGTGTCCCGAGGCACAACGGAAGAACTGGCTaGTGTGGTGCAGGGAATAGT +
Preference number: 4 (lower is better)
Translates to: THASMPVCEYRGWCVPRHNGRTG*CGAGNS
Trigger: ACTATTCCCTGCACCACATCAGCCAGTTCTTCCGTT...GTGCCTCGGGACACACCAACCCCTATACTCACACACAGGCATGGATGCATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR TCA 90 bp GGGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGAGTTCACCCATGTATGGACTGTCTTGCGGTGGGTaGGGGTGGTCTTCAGAATCT +
Preference number: 4 (lower is better)
Translates to: GIQESHAYERFKSSPMYGLSCGG*GWSSES
Trigger: AGATTCTGAAGACCACCCTCACCCACCGCAAGACAG...TCCATACATGGGTGAACTCTTGAATCGCTCATAGGCATGGGACTCCTGGATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR TCA 90 bp GGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGAGTTCACCCATGTATGGACGTGTGTGTTCCTTCCTaGGTATCCATGCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GSRSPMPMSDSRVHPCMDVCVPS*VSMPPG
Trigger: CCCAGGAGGCATGGATACTCAGGAAGGAACACACAC...GTCCATACATGGGTGAACTCTTGAATCGCTCATAGGCATGGGACTCCTGGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp GGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGAGTTCACCCATGTATGGACCATGGGCCACAAGGATaGACTTCGAGTAACCCAGGC +
Preference number: 4 (lower is better)
Translates to: GSRSPMPMSDSRVHPCMDHGPQG*TSSNPG
Trigger: GCCTGGGTTACTCGAAGTGCATCCTTGTGGCCCATG...GTCCATACATGGGTGAACTCTTGAATCGCTCATAGGCATGGGACTCCTGGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp TGTGGGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGAGTTCACCCATGTATGGATCCAATGCCCTATaGCTGGCAGGATGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: CGIQESHAYERFKSSPMYGSNAL*LAGCGP
Trigger: AGGCCCACATCCTGCCAGGCATAGGGCATTGGATCC...ATACATGGGTGAACTCTTGAATCGCTCATAGGCATGGGACTCCTGGATCCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp TGGACTCCCAGGCACACACAGATAATGGGTGTGTGTTCCTTCCTGAGTATCCATGGATCCAATGCCCTATaGCTGGCAGGATGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: WTPRHTQIMGVCSFLSIHGSNAL*LAGCGP
Trigger: AGGCCCACATCCTGCCAGGCATAGGGCATTGGATCC...ATGGATACTCAGGAAGGAACACACACCCATTATCTGTGTGTGCCTGGGAGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp GCGATTCAAGAGTTCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACTGCCAGGTAAACACCTaGGCGCGACAGGGACAGGAA +
Preference number: 4 (lower is better)
Translates to: AIQEFTHVWTLYGLPGTHCQVNT*ARQGQE
Trigger: TTCCTGTCCCTGTCGCGCCCAGGTGTTTACCTGGCA...GTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACTCTTGAATCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000221730.8
CDS-3UTR CCA 90 bp CATTGTATGGACTCCCAGGCACACACAGATAATGGGTGTGTGTTCCTTCCTGAGAGGGCACCCCAGTCATaGGCCACAAGGATGCACTTC +
Preference number: 4 (lower is better)
Translates to: HCMDSQAHTDNGCVFLPERAPQS*ATRMHF
Trigger: GAAGTGCATCCTTGTGGCCCATGACTGGGGTGCCCT...CTCAGGAAGGAACACACACCCATTATCTGTGTGTGCCTGGGAGTCCATACAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp GGGACAGGAAGGTCAGGGTTTAAGGTCTGTGCAGCTATGGCAGAGAAGCGACTTCCGCTCGACCAGGGATaGGTAGTAGATGGAGAAATG +
Preference number: 4 (lower is better)
Translates to: GTGRSGFKVCAAMAEKRLPLDQG*VVDGEM
Trigger: CATTTCTCCATCTACTACCCATCCCTGGTCGAGCGG...AAGTCGCTTCTCTGCCATAGCTGCACAGACCTTAAACCCTGACCTTCCTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp GGGTTTAAGGTCTGTGCAGCTATGGCAGAGAAGCGACTTTGGCAAAGCGCAGAGTGGGAACGGAAGAACTaGCTGATGTGGTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GFKVCAAMAEKRLWQSAEWERKN*LMWCRE
Trigger: TTCCCTGCACCACATCAGCCAGTTCTTCCGTTCCCA...CTCTGCGCTTTGCCAAAGTCGCTTCTCTGCCATAGCTGCACAGACCTTAAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp TATGGACATTGTATGGACTCCCAGGCACACACAGATAATGGGTGTGTGTTCCTTAGGCCTCGAGCTCGCTaGGGGTCAAGCATGGGATGC +
Preference number: 4 (lower is better)
Translates to: YGHCMDSQAHTDNGCVFLRPRAR*GSSMGC
Trigger: GCATCCCATGCTTGACCCCCAGCGAGCTCGAGGCCT...AAGGAACACACACCCATTATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp TGGACTCCCAGGCACACACAGATAATGGGTGTGTGTTCCTTCCTGAGTATCCATGCAGCAATGTGGGTGTaGTCAGCTCCTGGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: WTPRHTQIMGVCSFLSIHAAMWV*SAPGVP
Trigger: TGGAACCCCAGGAGCTGACCACACCCACATTGCTGC...ATGGATACTCAGGAAGGAACACACACCCATTATCTGTGTGTGCCTGGGAGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp CACCCATGTATGGACATTGTATGGACTCCCAGGCACACACAGATAATGGGTGTGGCAGCAATGTGGGTGTaGTCAGCTCCTGGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: HPCMDIVWTPRHTQIMGVAAMWV*SAPGVP
Trigger: TGGAACCCCAGGAGCTGACCACACCCACATTGCTGC...CACACCCATTATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp GGGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGAGTTCACCCATGTATGGATACTGGTGCATCTCCTaGGGGTTGCTCTGTGGGATC +
Preference number: 4 (lower is better)
Translates to: GIQESHAYERFKSSPMYGYWCIS*GLLCGI
Trigger: GATCCCACAGAGCAACCCCCAGGAGATGCACCAGTA...TCCATACATGGGTGAACTCTTGAATCGCTCATAGGCATGGGACTCCTGGATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp GGGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGAGTTCACCCATGTATGGAATAGGTGCGCTTGTGTaGGATCCAGGAGTCCCATGC +
Preference number: 4 (lower is better)
Translates to: GIQESHAYERFKSSPMYGIGALV*DPGVPC
Trigger: GCATGGGACTCCTGGATCCCACACAAGCGCACCTAT...TCCATACATGGGTGAACTCTTGAATCGCTCATAGGCATGGGACTCCTGGATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp GGGTTTAAGGTCTGTGCAGCTATGGCAGAGAAGCGACTTTGGCAAAGCGCAGAGGGCATCTGGCTCCACTaGAAGAGAGGTATACCCAGT +
Preference number: 4 (lower is better)
Translates to: GFKVCAAMAEKRLWQSAEGIWLH*KRGIPS
Trigger: ACTGGGTATACCTCTCTTCCAGTGGAGCCAGATGCC...CTCTGCGCTTTGCCAAAGTCGCTTCTCTGCCATAGCTGCACAGACCTTAAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR TCA 90 bp TTCAAGAGTTCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACAGATACACCAGGCTCCACATaGAGGCGCGCAGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: FKSSPMYGHCMDSQAHTDTPGST*RRAAAS
Trigger: TGAAGCTGCTGCGCGCCTTCATGTGGAGCCTGGTGT...ATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACTCTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR TCA 90 bp TATGGACATTGTATGGACTCCCAGGCACACACAGATAATGGGTGTGTGTTCCTTACACCAGGCTCCACATaGAGGCGCGCAGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: YGHCMDSQAHTDNGCVFLTPGST*RRAAAS
Trigger: TGAAGCTGCTGCGCGCCTTCATGTGGAGCCTGGTGT...AAGGAACACACACCCATTATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR TCA 90 bp TTCAAGAGTTCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACAGATACATGGGGGCACCACTaGCCACAACCATCCGCTCGA +
Preference number: 4 (lower is better)
Translates to: FKSSPMYGHCMDSQAHTDTWGHH*PQPSAR
Trigger: TCGAGCGGATGGTTGTGGTCAGTGGTGCCCCCATGT...ATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACTCTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR TCA 90 bp AGGTGCGCTTGTGTGGGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGAGTTAACGGAAGAACTGGCTaGTGTGGTGCAGGGAATAGT +
Preference number: 4 (lower is better)
Translates to: RCACVGSRSPMPMSDSRVNGRTG*CGAGNS
Trigger: ACTATTCCCTGCACCACATCAGCCAGTTCTTCCGTT...AACTCTTGAATCGCTCATAGGCATGGGACTCCTGGATCCCACACAAGCGCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR TCA 90 bp TGGACTCCCAGGCACACACAGATAATGGGTGTGTGTTCCTTCCTGAGTATCCATCTGTCTTGCGGTGGGTaGGGGTGGTCTTCAGAATCT +
Preference number: 4 (lower is better)
Translates to: WTPRHTQIMGVCSFLSIHLSCGG*GWSSES
Trigger: AGATTCTGAAGACCACCCTCACCCACCGCAAGACAG...ATGGATACTCAGGAAGGAACACACACCCATTATCTGTGTGTGCCTGGGAGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp AGAGTTCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACAGATAATGAGGTTCAGGAAACCGTaGTCACCCAGCGAGGGGTCG +
Preference number: 4 (lower is better)
Translates to: RVHPCMDIVWTPRHTQIMRFRKP*SPSEGS
Trigger: CGACCCCTCGCTGGGTGAGCACGGTTTCCTGAACCT...CATTATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp TTCAAGAGTTCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACAGATAGGTTCAGGAAACCGTaGTCACCCAGCGAGGGGTCG +
Preference number: 4 (lower is better)
Translates to: FKSSPMYGHCMDSQAHTDRFRKP*SPSEGS
Trigger: CGACCCCTCGCTGGGTGAGCACGGTTTCCTGAACCT...ATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACTCTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp TCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACAGATAATGGGTGTGGATCCAATGCCCTATaGCTGGCAGGATGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SPMYGHCMDSQAHTDNGCGSNAL*LAGCGP
Trigger: AGGCCCACATCCTGCCAGGCATAGGGCATTGGATCC...ACACCCATTATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp TCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACAGATAATGGGTGTGCATCTCCTGGGGGTTaGTCTGTGGGATCCAATGCC +
Preference number: 4 (lower is better)
Translates to: SPMYGHCMDSQAHTDNGCASPGG*SVGSNA
Trigger: GGCATTGGATCCCACAGAGCAACCCCCAGGAGATGC...ACACCCATTATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp AGTTCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACAGATAATGGGCTTCCTGAGTATCCATaGCTCCTGGGCAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SSPMYGHCMDSQAHTDNGLPEYP*LLGRPA
Trigger: TGCTGGCCTGCCCAGGAGGCATGGATACTCAGGAAG...CCCATTATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp TGGACTCCCAGGCACACACAGATAATGGGTGTGTGTTCCTTCCTGAGTATCCATTCCACAGCCACAACATaGAAGCGGCTCTGGAACTCC +
Preference number: 4 (lower is better)
Translates to: WTPRHTQIMGVCSFLSIHSTATT*KRLWNS
Trigger: GGAGTTCCAGAGCCGCTTCCATGTTGTGGCTGTGGA...ATGGATACTCAGGAAGGAACACACACCCATTATCTGTGTGTGCCTGGGAGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp TTCAAGAGTTCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACAGATGCTGGGGGTCAAGCATaGGATGCCTGTCTTGCGGTG +
Preference number: 4 (lower is better)
Translates to: FKSSPMYGHCMDSQAHTDAGGQA*DACLAV
Trigger: CACCGCAAGACAGGCATCCCATGCTTGACCCCCAGC...ATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACTCTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp TGGACTCCCAGGCACACACAGATAATGGGTGTGTGTTCCTTCCTGAGTATCCATAAGGCCCACATGTACTaGTGCATCTCCTGGGGGTTG +
Preference number: 4 (lower is better)
Translates to: WTPRHTQIMGVCSFLSIHKAHMY*CISWGL
Trigger: CAACCCCCAGGAGATGCACCAGTACATGTGGGCCTT...ATGGATACTCAGGAAGGAACACACACCCATTATCTGTGTGTGCCTGGGAGTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp GACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGGTATACCCAGTTCCCAGAGTTCACCCATGTATaGACATTGTATGGACTCCCA +
Preference number: 4 (lower is better)
Translates to: DTRSRHLAPLEERYTQFPEFTHV*TLYGLP
Trigger: TGGGAGTCCATACAATGTCCATACATGGGTGAACTC...TGGGAACTGGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp GGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGAGTTCACCCATGTATGGACGGCATCTGGCTCCACTaGAAGAGAGGTATACCCAGT +
Preference number: 4 (lower is better)
Translates to: GSRSPMPMSDSRVHPCMDGIWLH*KRGIPS
Trigger: ACTGGGTATACCTCTCTTCCAGTGGAGCCAGATGCC...GTCCATACATGGGTGAACTCTTGAATCGCTCATAGGCATGGGACTCCTGGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR TCA 90 bp ATGCATCCATGCCTGTGTGTGAGTATAGGGGTTGGTGTGTCCCGAGGCACCCATGTGGTCTTCAGAATCTaGAAGTCAGACATAGACAGC +
Preference number: 4 (lower is better)
Translates to: MHPCLCVSIGVGVSRGTHVVFRI*KSDIDS
Trigger: GCTGTCTATGTCTGACTTTCAGATTCTGAAGACCAC...ATGGGTGCCTCGGGACACACCAACCCCTATACTCACACACAGGCATGGATGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR TCA 90 bp GCGATTCAAGAGTTCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACGGAGTCCCATGCCTATaGGCGATTCAAGAGTTCACC +
Preference number: 4 (lower is better)
Translates to: AIQEFTHVWTLYGLPGTHGVPCL*AIQEFT
Trigger: GGTGAACTCTTGAATCGCTCATAGGCATGGGACTCC...GTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACTCTTGAATCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR TCA 90 bp CACCCATGTATGGACATTGTATGGACTCCCAGGCACACACAGATAATGGGTGTGGGAGTCCCATGCCTATaGGCGATTCAAGAGTTCACC +
Preference number: 4 (lower is better)
Translates to: HPCMDIVWTPRHTQIMGVGVPCL*AIQEFT
Trigger: GGTGAACTCTTGAATCGCTCATAGGCATGGGACTCC...CACACCCATTATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp GCGATTCAAGAGTTCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACTTCTCAGGGAAGCCGTaGAGAAACAGCATGAGGGGT +
Preference number: 4 (lower is better)
Translates to: AIQEFTHVWTLYGLPGTHFSGKP*RNSMRG
Trigger: ACCCCTCATGCTGTTTCTGCACGGCTTCCCTGAGAA...GTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACTCTTGAATCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp AGAGTTCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACAGATAATGGCATCTCCTGGGGGTTaGTCTGTGGGATCCAATGCC +
Preference number: 4 (lower is better)
Translates to: RVHPCMDIVWTPRHTQIMASPGG*SVGSNA
Trigger: GGCATTGGATCCCACAGAGCAACCCCCAGGAGATGC...CATTATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp CATAGGTGCGCTTGTGTGGGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGAACACACATGCATCCATaGCTGTGTGTGAGTATAGGG +
Preference number: 4 (lower is better)
Translates to: HRCACVGSRSPMPMSDSRTHMHP*LCVSIG
Trigger: CCCTATACTCACACACAGGCATGGATGCATGTGTGT...TCTTGAATCGCTCATAGGCATGGGACTCCTGGATCCCACACAAGCGCACCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp CATTGTATGGACTCCCAGGCACACACAGATAATGGGTGTGTGTTCCTTCCTGAGCCGCTCGACCAGGGATaGGTAGTAGATGGAGAAATG +
Preference number: 4 (lower is better)
Translates to: HCMDSQAHTDNGCVFLPEPLDQG*VVDGEM
Trigger: CATTTCTCCATCTACTACCCATCCCTGGTCGAGCGG...CTCAGGAAGGAACACACACCCATTATCTGTGTGTGCCTGGGAGTCCATACAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp CATTGTATGGACTCCCAGGCACACACAGATAATGGGTGTGTGTTCCTTCCTGAGAGGTCTGTGCAGCTATaGCAGAGAAGCGACTTTGGC +
Preference number: 4 (lower is better)
Translates to: HCMDSQAHTDNGCVFLPERSVQL*QRSDFG
Trigger: GCCAAAGTCGCTTCTCTGCCATAGCTGCACAGACCT...CTCAGGAAGGAACACACACCCATTATCTGTGTGTGCCTGGGAGTCCATACAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp ACACATGCATCCATGCCTGTGTGTGAGTATAGGGGTTGGTGTGTCCCGAGGCACAAAAGGAGAAAGAGTTaGAATGGTGGGCCTGGCTTA +
Preference number: 4 (lower is better)
Translates to: THASMPVCEYRGWCVPRHKRRKS*NGGPGL
Trigger: TAAGCCAGGCCCACCATTCCAACTCTTTCTCCTTTT...GTGCCTCGGGACACACCAACCCCTATACTCACACACAGGCATGGATGCATGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435261.5
CDS-3UTR TCA 90 bp CATTGTATGGACTCCCAGGCACACACAGATAATGGGTGTGTGTTCCTTCCTGAGAACGGAAGAACTGGCTaGTGTGGTGCAGGGAATAGT +
Preference number: 4 (lower is better)
Translates to: HCMDSQAHTDNGCVFLPENGRTG*CGAGNS
Trigger: ACTATTCCCTGCACCACATCAGCCAGTTCTTCCGTT...CTCAGGAAGGAACACACACCCATTATCTGTGTGTGCCTGGGAGTCCATACAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR TCA 90 bp TATGGACATTGTATGGACTCCCAGGCACACACAGATAATGGGTGTGTGTTCCTTCTGTCTTGCGGTGGGTaGGGGTGGTCTTCAGAATCT +
Preference number: 4 (lower is better)
Translates to: YGHCMDSQAHTDNGCVFLLSCGG*GWSSES
Trigger: AGATTCTGAAGACCACCCTCACCCACCGCAAGACAG...AAGGAACACACACCCATTATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp AGAGTTCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACAGATAATGTGTGAGTATAGGGGTTaGTGTGTCCCGAGGCACCCA +
Preference number: 4 (lower is better)
Translates to: RVHPCMDIVWTPRHTQIMCEYRG*CVPRHP
Trigger: TGGGTGCCTCGGGACACACCAACCCCTATACTCACA...CATTATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR TCA 90 bp TATGGACATTGTATGGACTCCCAGGCACACACAGATAATGGGTGTGTGTTCCTTGGAGTCCCATGCCTATaGGCGATTCAAGAGTTCACC +
Preference number: 4 (lower is better)
Translates to: YGHCMDSQAHTDNGCVFLGVPCL*AIQEFT
Trigger: GGTGAACTCTTGAATCGCTCATAGGCATGGGACTCC...AAGGAACACACACCCATTATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp TGGACTCCCAGGCACACACAGATAATGGGTGTGTGTTCCTTCCTGAGTATCCATACACACATGCATCCATaGCTGTGTGTGAGTATAGGG +
Preference number: 4 (lower is better)
Translates to: WTPRHTQIMGVCSFLSIHTHMHP*LCVSIG
Trigger: CCCTATACTCACACACAGGCATGGATGCATGTGTGT...ATGGATACTCAGGAAGGAACACACACCCATTATCTGTGTGTGCCTGGGAGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp CACCCATGTATGGACATTGTATGGACTCCCAGGCACACACAGATAATGGGTGTGTGTATGGACATTGTATaGACTCCCAGGCACACACAG +
Preference number: 4 (lower is better)
Translates to: HPCMDIVWTPRHTQIMGVCMDIV*TPRHTQ
Trigger: CTGTGTGTGCCTGGGAGTCCATACAATGTCCATACA...CACACCCATTATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp GGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGAGTTCACCCATGTATGGACGAGTTCACCCATGTATaGACATTGTATGGACTCCCA +
Preference number: 4 (lower is better)
Translates to: GSRSPMPMSDSRVHPCMDEFTHV*TLYGLP
Trigger: TGGGAGTCCATACAATGTCCATACATGGGTGAACTC...GTCCATACATGGGTGAACTCTTGAATCGCTCATAGGCATGGGACTCCTGGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp TTCAAGAGTTCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACAGATAGGTCTGTGCAGCTATaGCAGAGAAGCGACTTTGGC +
Preference number: 4 (lower is better)
Translates to: FKSSPMYGHCMDSQAHTDRSVQL*QRSDFG
Trigger: GCCAAAGTCGCTTCTCTGCCATAGCTGCACAGACCT...ATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACTCTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp TCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACAGATAATGGGTGTTGTATGGACATTGTATaGACTCCCAGGCACACACAG +
Preference number: 4 (lower is better)
Translates to: SPMYGHCMDSQAHTDNGCCMDIV*TPRHTQ
Trigger: CTGTGTGTGCCTGGGAGTCCATACAATGTCCATACA...ACACCCATTATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CCA 90 bp GAGCGATTCAAGAGTTCACCCATGTATGGACATTGTATGGACTCCCAGGCACACGAGTTCACCCATGTATaGACATTGTATGGACTCCCA +
Preference number: 4 (lower is better)
Translates to: ERFKSSPMYGHCMDSQAHEFTHV*TLYGLP
Trigger: TGGGAGTCCATACAATGTCCATACATGGGTGAACTC...GTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACTCTTGAATCGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp AGAGTTCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACAGATAATGACACACATGCATCCATaGCTGTGTGTGAGTATAGGG +
Preference number: 4 (lower is better)
Translates to: RVHPCMDIVWTPRHTQIMTHMHP*LCVSIG
Trigger: CCCTATACTCACACACAGGCATGGATGCATGTGTGT...CATTATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR GCA 90 bp TTCAAGAGTTCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACAGATCATATGCAGAGTAGGTaGGGCCTACAAGCCAAAAAG +
Preference number: 4 (lower is better)
Translates to: FKSSPMYGHCMDSQAHTDHMQSR*GLQAKK
Trigger: CTTTTTGGCTTGTAGGCCGCACCTACTCTGCATATG...ATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACTCTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435261.5
CDS-3UTR TCA 90 bp AGAGTTCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACAGATAATGGTGGTCTTCAGAATCTaGAAGTCAGACATAGACAGC +
Preference number: 4 (lower is better)
Translates to: RVHPCMDIVWTPRHTQIMVVFRI*KSDIDS
Trigger: GCTGTCTATGTCTGACTTTCAGATTCTGAAGACCAC...CATTATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS GCA 90 bp TCGCCGCGCTCCGGGACCACGGCGGCGCTGCCGGCCAGGGGCACCTaGAGCAGCGGCGAAGCGGTGTCAGGGCTCAGGGGCCCATCGCCC +
Preference number: 5 (lower is better)
Translates to: SPRSGTTAALPARGT*SSGEAVSGLRGPSP
Trigger: GGGCGATGGGCCCCTGAGCCCTGACACCGCTTCGCCGCTGCTGCAGGTGCCCCTGGCCGGCAGCGCCGCCGTGGTCCCGGAGCGCGGCGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221730.8
CDS CCA 90 bp AGCGGCGAAGCGGTGTCAGGGCTCAGGGGCCCATCGCCCTTGGCCTaGGGCCCCTCCGTGCCGTCGGGATTTGTGGGACGCGCTGAAGGA +
Preference number: 5 (lower is better)
Translates to: SGEAVSGLRGPSPLA*GPSVPSGFVGRAEG
Trigger: TCCTTCAGCGCGTCCCACAAATCCCGACGGCACGGAGGGGCCCCAGGCCAAGGGCGATGGGCCCCTGAGCCCTGACACCGCTTCGCCGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221730.8
CDS CCA 90 bp TGGGGGTTGCTCTGTGGGATCCAATGCCCTATGCCTGGCAGGATGTaGGCCTCCAAGCGGCCCGGCACAAAGCGGCTGCCGATGGCTTCC +
Preference number: 5 (lower is better)
Translates to: WGLLCGIQCPMPGRM*ASKRPGTKRLPMAS
Trigger: GGAAGCCATCGGCAGCCGCTTTGTGCCGGGCCGCTTGGAGGCCCACATCCTGCCAGGCATAGGGCATTGGATCCCACAGAGCAACCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS CCA 90 bp GTGCATCTCCTGGGGGTTGCTCTGTGGGATCCAATGCCCTATGCCTaGCAGGATGTGGGCCTCCAAGCGGCCCGGCACAAAGCGGCTGCC +
Preference number: 5 (lower is better)
Translates to: VHLLGVALWDPMPYA*QDVGLQAARHKAAA
Trigger: GGCAGCCGCTTTGTGCCGGGCCGCTTGGAGGCCCACATCCTGCCAGGCATAGGGCATTGGATCCCACAGAGCAACCCCCAGGAGATGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS GCA 90 bp TGCCTGGCAGGATGTGGGCCTCCAAGCGGCCCGGCACAAAGCGGCTaGCGATGGCTTCCACCAGCCCCAGCTCCAAGTAAGTGTCCTTCT +
Preference number: 5 (lower is better)
Translates to: CLAGCGPPSGPAQSG*RWLPPAPAPSKCPS
Trigger: AGAAGGACACTTACTTGGAGCTGGGGCTGGTGGAAGCCATCGGCAGCCGCTTTGTGCCGGGCCGCTTGGAGGCCCACATCCTGCCAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS GCA 90 bp ACTGGTGCATCTCCTGGGGGTTGCTCTGTGGGATCCAATGCCCTATaGCTGGCAGGATGTGGGCCTCCAAGCGGCCCGGCACAAAGCGGC +
Preference number: 5 (lower is better)
Translates to: TGASPGGCSVGSNAL*LAGCGPPSGPAQSG
Trigger: GCCGCTTTGTGCCGGGCCGCTTGGAGGCCCACATCCTGCCAGGCATAGGGCATTGGATCCCACAGAGCAACCCCCAGGAGATGCACCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS CCA 90 bp TGCAGAGTAGGTGCGGCCCAGGGGCGCGCGACCCTCCCTTCGGTCTaGCTCCAAAGACCTAGCAGCACTGACTTCACCCAGCTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: CRVGAAQGRATLPSV*LQRPSSTDFTQLWF
Trigger: GAACCACAGCTGGGTGAAGTCAGTGCTGCTAGGTCTTTGGAGCCAGACCGAAGGGAGGGTCGCGCGCCCCTGGGCCGCACCTACTCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602233.5
CDS-3UTR CAA 90 bp GGGTTGGTGTGTCCCGAGGCACCCATAGGTGCGCTTGTGTGGGATCCAGGAGTCCGCAGGCCCGAGCTCTaGAGGTTCAGGAAACCGTGC +
Preference number: 5 (lower is better)
Translates to: GLVCPEAPIGALVWDPGVRRPEL*RFRKPC
Trigger: GCACGGTTTCCTGAACCTCAAGAGCTCGGGCCTGCG...GACTCCTGGATCCCACACAAGCGCACCTATGGGTGCCTCGGGACACACCAACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS TCA 90 bp AGGCGGGCGGCTCCGACAGAAAACAGCCAGAGCGCACCACTCACCTaGGTGCCAGGTAAACACCTGGGCGCGACAGGGACAGGAAACAAG +
Preference number: 5 (lower is better)
Translates to: RRAAPTENSQSAPLT*VPGKHLGATGTGNK
Trigger: CTTGTTTCCTGTCCCTGTCGCGCCCAGGTGTTTACCTGGCACTCAGGTGAGTGGTGCGCTCTGGCTGTTTTCTGTCGGAGCCGCCCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221730.8
CDS GCA 90 bp CACATGTACTGGTGCATCTCCTGGGGGTTGCTCTGTGGGATCCAATaGCCTATGCCTGGCAGGATGTGGGCCTCCAAGCGGCCCGGCACA +
Preference number: 5 (lower is better)
Translates to: HMYWCISWGLLCGIQ*PMPGRMWASKRPGT
Trigger: TGTGCCGGGCCGCTTGGAGGCCCACATCCTGCCAGGCATAGGGCATTGGATCCCACAGAGCAACCCCCAGGAGATGCACCAGTACATGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CAA 90 bp GTGAGTATAGGGGTTGGTGTGTCCCGAGGCACCCATAGGTGCGCTTGTGTGGGACGCAGGCCCGAGCTCTaGAGGTTCAGGAAACCGTGC +
Preference number: 5 (lower is better)
Translates to: VSIGVGVSRGTHRCACVGRRPEL*RFRKPC
Trigger: GCACGGTTTCCTGAACCTCAAGAGCTCGGGCCTGCG...TCCCACACAAGCGCACCTATGGGTGCCTCGGGACACACCAACCCCTATACTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CAA 90 bp GGGTTGGTGTGTCCCGAGGCACCCATAGGTGCGCTTGTGTGGGATCCAGGAGTCGGCAGAGAAGCGACTTaGGCAAAGCGCAGAGTGAGG +
Preference number: 5 (lower is better)
Translates to: GLVCPEAPIGALVWDPGVGREAT*AKRRVR
Trigger: CCTCACTCTGCGCTTTGCCAAAGTCGCTTCTCTGCC...GACTCCTGGATCCCACACAAGCGCACCTATGGGTGCCTCGGGACACACCAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS GCA 90 bp GGTCTTGCAAGAAGGCCCACATGTACTGGTGCATCTCCTGGGGGTTaGTCTGTGGGATCCAATGCCCTATGCCTGGCAGGATGTGGGCCT +
Preference number: 5 (lower is better)
Translates to: GLARRPTCTGASPGG*SVGSNALCLAGCGP
Trigger: AGGCCCACATCCTGCCAGGCATAGGGCATTGGATCCCACAGAGCAACCCCCAGGAGATGCACCAGTACATGTGGGCCTTCTTGCAAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CAA 90 bp AGGTGGGACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGGTATACCCAGGTGCAGGGAATAGTCTaGGTACACCGACATGGGGGC +
Preference number: 5 (lower is better)
Translates to: RWDTRSRHLAPLEERYTQVQGIV*VHRHGG
Trigger: GCCCCCATGTCGGTGTACCAAGACTATTCCCTGCAC...CTGGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTCCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CAA 90 bp TCGAAGGCAGGGACAGGAAGGTCAGGGTTTAAGGTCTGTGCAGCTATGGCAGAGCATGGGATGCCTGTCTaGCGGTGGGTGAGGGTGGTC +
Preference number: 5 (lower is better)
Translates to: SKAGTGRSGFKVCAAMAEHGMPV*RWVRVV
Trigger: GACCACCCTCACCCACCGCAAGACAGGCATCCCATG...CTCTGCCATAGCTGCACAGACCTTAAACCCTGACCTTCCTGTCCCTGCCTTCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CAA 90 bp TCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGGTATACCCAGTTCCCAGGGTCTGCATCTCCTGGGGGTaGCTCTGTGGGATCCAATGC +
Preference number: 5 (lower is better)
Translates to: SVSASGSTGREVYPVPRVCISWG*LCGIQC
Trigger: GCATTGGATCCCACAGAGCAACCCCCAGGAGATGCA...GACCCTGGGAACTGGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CAA 90 bp GTGAGTATAGGGGTTGGTGTGTCCCGAGGCACCCATAGGTGCGCTTGTGTGGGAGGCAGAGAAGCGACTTaGGCAAAGCGCAGAGTGAGG +
Preference number: 5 (lower is better)
Translates to: VSIGVGVSRGTHRCACVGGREAT*AKRRVR
Trigger: CCTCACTCTGCGCTTTGCCAAAGTCGCTTCTCTGCC...TCCCACACAAGCGCACCTATGGGTGCCTCGGGACACACCAACCCCTATACTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS TCA 90 bp AACGCCAGGAGAACCAGTTCTCAGGGAAGCCGTGCAGAAACAGCATaGGGGGTCCGTTACCTCGTCCAGCCGAGACATAGTGCAGACGCA +
Preference number: 5 (lower is better)
Translates to: NARRTSSQGSRAETA*GVRYLVQPRHSADA
Trigger: TGCGTCTGCACTATGTCTCGGCTGGACGAGGTAACGGACCCCTCATGCTGTTTCTGCACGGCTTCCCTGAGAACTGGTTCTCCTGGCGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000594042.1
ENST00000602233.5
CDS TCA 90 bp GAGGTTTCGGTAGTAGTTGAGGGGCCCAGTGAGGCCACCAGGCTGTaGGAAGTTATAAAGGAAGGCCTCGAGCTCGCTGGGGGTCAAGCA +
Preference number: 5 (lower is better)
Translates to: EVSVVVEGPSEATRL*EVIKEGLELAGGQA
Trigger: TGCTTGACCCCCAGCGAGCTCGAGGCCTTCCTTTATAACTTCTCACAGCCTGGTGGCCTCACTGGGCCCCTCAACTACTACCGAAACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS CCA 90 bp TCCAGCAGGTCTTGCAAGAAGGCCCACATGTACTGGTGCATCTCCTaGGGGTTGCTCTGTGGGATCCAATGCCCTATGCCTGGCAGGATG +
Preference number: 5 (lower is better)
Translates to: SSRSCKKAHMYWCIS*GLLCGIQCPMPGRM
Trigger: CATCCTGCCAGGCATAGGGCATTGGATCCCACAGAGCAACCCCCAGGAGATGCACCAGTACATGTGGGCCTTCTTGCAAGACCTGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CAA 90 bp GACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGGTATACCCAGTTCCCAGTGCAGGGAATAGTCTaGGTACACCGACATGGGGGC +
Preference number: 5 (lower is better)
Translates to: DTRSRHLAPLEERYTQFPVQGIV*VHRHGG
Trigger: GCCCCCATGTCGGTGTACCAAGACTATTCCCTGCAC...TGGGAACTGGGTATACCTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CAA 90 bp GGAAGGGAGGAGGTGGGACACTCGGTCTCGGCATCTGGCTCCACTGGAAGAGAGACCCATGTATGGACATaGTATGGACTCCCAGGCACA +
Preference number: 5 (lower is better)
Translates to: GREEVGHSVSASGSTGRETHVWT*YGLPGT
Trigger: TGTGCCTGGGAGTCCATACAATGTCCATACATGGGT...CTCTCTTCCAGTGGAGCCAGATGCCGAGACCGAGTGTCCCACCTCCTCCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS TCA 90 bp TGTGGTGCAGGGAATAGTCTTGGTACACCGACATGGGGGCACCACTaGCCACAACCATCCGCTCGACCAGGGATGGGTAGTAGATGGAGA +
Preference number: 5 (lower is better)
Translates to: CGAGNSLGTPTWGHH*PQPSARPGMGSRWR
Trigger: TCTCCATCTACTACCCATCCCTGGTCGAGCGGATGGTTGTGGTCAGTGGTGCCCCCATGTCGGTGTACCAAGACTATTCCCTGCACCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CAA 90 bp ACACATGCATCCATGCCTGTGTGTGAGTATAGGGGTTGGTGTGTCCCGAGGCACGTGCAGGGAATAGTCTaGGTACACCGACATGGGGGC +
Preference number: 5 (lower is better)
Translates to: THASMPVCEYRGWCVPRHVQGIV*VHRHGG
Trigger: GCCCCCATGTCGGTGTACCAAGACTATTCCCTGCAC...GTGCCTCGGGACACACCAACCCCTATACTCACACACAGGCATGGATGCATGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS TCA 90 bp AGGGCAGCTGGAACAGGAACATGTAGTGGGAACGGAAGAACTGGCTaGTGTGGTGCAGGGAATAGTCTTGGTACACCGACATGGGGGCAC +
Preference number: 5 (lower is better)
Translates to: RAAGTGTCSGNGRTG*CGAGNSLGTPTWGH
Trigger: GTGCCCCCATGTCGGTGTACCAAGACTATTCCCTGCACCACATCAGCCAGTTCTTCCGTTCCCACTACATGTTCCTGTTCCAGCTGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS GCA 90 bp CAGGCACACACAGATAATGGGTGTGTGTTCCTTCCTGAGTATCCATaGCTCCTGGGCAGGCCAGCAAGGACCACTAGTCCAGCAGGTCTT +
Preference number: 5 (lower is better)
Translates to: QAHTDNGCVFLPEYP*LLGRPARTTSPAGL
Trigger: AAGACCTGCTGGACTAGTGGTCCTTGCTGGCCTGCCCAGGAGGCATGGATACTCAGGAAGGAACACACACCCATTATCTGTGTGTGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CAA 90 bp GCGATTCAAGAGTTCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACCCGTGCCGTCGGGATTaGTGGGACGCGCTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: AIQEFTHVWTLYGLPGTHPCRRD*WDALKE
Trigger: TTCCTTCAGCGCGTCCCACAAATCCCGACGGCACGG...GTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACTCTTGAATCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000221730.8
CDS-3UTR CAA 90 bp TGTGGGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGAGTTCACCCATGTATCGCAGGCCCGAGCTCTaGAGGTTCAGGAAACCGTGC +
Preference number: 5 (lower is better)
Translates to: CGIQESHAYERFKSSPMYRRPEL*RFRKPC
Trigger: GCACGGTTTCCTGAACCTCAAGAGCTCGGGCCTGCG...ATACATGGGTGAACTCTTGAATCGCTCATAGGCATGGGACTCCTGGATCCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CAA 90 bp AGGTGCGCTTGTGTGGGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGAGTTCCAGCAGCAGGTCGATaGTGTAGCAGTCCACATCCC +
Preference number: 5 (lower is better)
Translates to: RCACVGSRSPMPMSDSRVPAAGR*CSSPHP
Trigger: GGGATGTGGACTGCTACACAATCGACCTGCTGCTGG...AACTCTTGAATCGCTCATAGGCATGGGACTCCTGGATCCCACACAAGCGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CAA 90 bp GAGCGATTCAAGAGTTCACCCATGTATGGACATTGTATGGACTCCCAGGCACACCATGGGATGCCTGTCTaGCGGTGGGTGAGGGTGGTC +
Preference number: 5 (lower is better)
Translates to: ERFKSSPMYGHCMDSQAHHGMPV*RWVRVV
Trigger: GACCACCCTCACCCACCGCAAGACAGGCATCCCATG...GTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACTCTTGAATCGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CAA 90 bp AGAGTTCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACAGATAATGCATGGGATGCCTGTCTaGCGGTGGGTGAGGGTGGTC +
Preference number: 5 (lower is better)
Translates to: RVHPCMDIVWTPRHTQIMHGMPV*RWVRVV
Trigger: GACCACCCTCACCCACCGCAAGACAGGCATCCCATG...CATTATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CAA 90 bp AGGTGCGCTTGTGTGGGATCCAGGAGTCCCATGCCTATGAGCGATTCAAGAGTTCTAGTCCAGCAGGTCTaGCAAGAAGGCCCACATGTA +
Preference number: 5 (lower is better)
Translates to: RCACVGSRSPMPMSDSRVLVQQV*QEGPHV
Trigger: TACATGTGGGCCTTCTTGCAAGACCTGCTGGACTAG...AACTCTTGAATCGCTCATAGGCATGGGACTCCTGGATCCCACACAAGCGCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CAA 90 bp GGGACAGGAAGGTCAGGGTTTAAGGTCTGTGCAGCTATGGCAGAGAAGCGACTTCTAGTCCAGCAGGTCTaGCAAGAAGGCCCACATGTA +
Preference number: 5 (lower is better)
Translates to: GTGRSGFKVCAAMAEKRLLVQQV*QEGPHV
Trigger: TACATGTGGGCCTTCTTGCAAGACCTGCTGGACTAG...AAGTCGCTTCTCTGCCATAGCTGCACAGACCTTAAACCCTGACCTTCCTGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CAA 90 bp ATGCATCCATGCCTGTGTGTGAGTATAGGGGTTGGTGTGTCCCGAGGCACCCATACCCATGTATGGACATaGTATGGACTCCCAGGCACA +
Preference number: 5 (lower is better)
Translates to: MHPCLCVSIGVGVSRGTHTHVWT*YGLPGT
Trigger: TGTGCCTGGGAGTCCATACAATGTCCATACATGGGT...ATGGGTGCCTCGGGACACACCAACCCCTATACTCACACACAGGCATGGATGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CAA 90 bp AGTTCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACAGATAATGGGTGCATCTCCTGGGGGTaGCTCTGTGGGATCCAATGC +
Preference number: 5 (lower is better)
Translates to: SSPMYGHCMDSQAHTDNGCISWG*LCGIQC
Trigger: GCATTGGATCCCACAGAGCAACCCCCAGGAGATGCA...CCCATTATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CAA 90 bp AGTTCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACAGATAATGGGGGCAGAGAAGCGACTTaGGCAAAGCGCAGAGTGAGG +
Preference number: 5 (lower is better)
Translates to: SSPMYGHCMDSQAHTDNGGREAT*AKRRVR
Trigger: CCTCACTCTGCGCTTTGCCAAAGTCGCTTCTCTGCC...CCCATTATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CAA 90 bp TTCAAGAGTTCACCCATGTATGGACATTGTATGGACTCCCAGGCACACACAGATTGCATCTCCTGGGGGTaGCTCTGTGGGATCCAATGC +
Preference number: 5 (lower is better)
Translates to: FKSSPMYGHCMDSQAHTDCISWG*LCGIQC
Trigger: GCATTGGATCCCACAGAGCAACCCCCAGGAGATGCA...ATCTGTGTGTGCCTGGGAGTCCATACAATGTCCATACATGGGTGAACTCTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS-3UTR CAA 90 bp TGGACTCCCAGGCACACACAGATAATGGGTGTGTGTTCCTTCCTGAGTATCCATACCCATGTATGGACATaGTATGGACTCCCAGGCACA +
Preference number: 5 (lower is better)
Translates to: WTPRHTQIMGVCSFLSIHTHVWT*YGLPGT
Trigger: TGTGCCTGGGAGTCCATACAATGTCCATACATGGGT...ATGGATACTCAGGAAGGAACACACACCCATTATCTGTGTGTGCCTGGGAGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS CCA 72 bp GCGGTGTCAGGGCTCAGGGGCCCATCGCCCTTGGCCTaGGGCCCCTCCGTGCCGTCGGGATTTGTGGGACGC +
Preference number: 6 (lower is better)
Translates to: AVSGLRGPSPLA*GPSVPSGFVGR
Trigger: GCGTCCCACAAATCCCGACGGCACGGAGGGGCCCCAGGCCAAGGGCGATGGGCCCCTGAGCCCTGACACCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221730.8
CDS CCA 72 bp CCTTGGCCTGGGGCCCCTCCGTGCCGTCGGGATTTGTaGGACGCGCTGAAGGAAGAGGCGGGCGGCTCCGAC +
Preference number: 6 (lower is better)
Translates to: PWPGAPPCRRDL*DALKEEAGGSD
Trigger: GTCGGAGCCGCCCGCCTCTTCCTTCAGCGCGTCCCACAAATCCCGACGGCACGGAGGGGCCCCAGGCCAAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221730.8
CDS TCA 72 bp CGGCCACCAGCGCCACCGAGAACACCAGGCTCCACATaGAGGCGCGCAGCAGCTTCAGCGACAGGCGCGACG +
Preference number: 6 (lower is better)
Translates to: RPPAPPRTPGST*RRAAASATGAT
Trigger: CGTCGCGCCTGTCGCTGAAGCTGCTGCGCGCCTTCATGTGGAGCCTGGTGTTCTCGGTGGCGCTGGTGGCCG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000594042.1
ENST00000602233.5
CDS TCA 72 bp GGGCCCCTCCGTGCCGTCGGGATTTGTGGGACGCGCTaGAGGAAGAGGCGGGCGGCTCCGACAGAAAACAGC +
Preference number: 6 (lower is better)
Translates to: GPLRAVGICGTR*RKRRAAPTENS
Trigger: GCTGTTTTCTGTCGGAGCCGCCCGCCTCTTCCTTCAGCGCGTCCCACAAATCCCGACGGCACGGAGGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221730.8
CDS CCA 72 bp GGTGCGGCCCAGGGGCGCGCGACCCTCCCTTCGGTCTaGCTCCAAAGACCTAGCAGCACTGACTTCACCCAG +
Preference number: 6 (lower is better)
Translates to: GAAQGRATLPSV*LQRPSSTDFTQ
Trigger: CTGGGTGAAGTCAGTGCTGCTAGGTCTTTGGAGCCAGACCGAAGGGAGGGTCGCGCGCCCCTGGGCCGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602233.5
CDS GCA 72 bp GGATGTGGGCCTCCAAGCGGCCCGGCACAAAGCGGCTaGCGATGGCTTCCACCAGCCCCAGCTCCAAGTAAG +
Preference number: 6 (lower is better)
Translates to: GCGPPSGPAQSG*RWLPPAPAPSK
Trigger: CTTACTTGGAGCTGGGGCTGGTGGAAGCCATCGGCAGCCGCTTTGTGCCGGGCCGCTTGGAGGCCCACATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS CCA 72 bp GGGCCTCCAAGCGGCCCGGCACAAAGCGGCTGCCGATaGCTTCCACCAGCCCCAGCTCCAAGTAAGTGTCCT +
Preference number: 6 (lower is better)
Translates to: GPPSGPAQSGCR*LPPAPAPSKCP
Trigger: AGGACACTTACTTGGAGCTGGGGCTGGTGGAAGCCATCGGCAGCCGCTTTGTGCCGGGCCGCTTGGAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS CCA 72 bp CTCTGTGGGATCCAATGCCCTATGCCTGGCAGGATGTaGGCCTCCAAGCGGCCCGGCACAAAGCGGCTGCCG +
Preference number: 6 (lower is better)
Translates to: LCGIQCPMPGRM*ASKRPGTKRLP
Trigger: CGGCAGCCGCTTTGTGCCGGGCCGCTTGGAGGCCCACATCCTGCCAGGCATAGGGCATTGGATCCCACAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS GCA 72 bp TCTCCTGGGGGTTGCTCTGTGGGATCCAATGCCCTATaGCTGGCAGGATGTGGGCCTCCAAGCGGCCCGGCA +
Preference number: 6 (lower is better)
Translates to: SPGGCSVGSNAL*LAGCGPPSGPA
Trigger: TGCCGGGCCGCTTGGAGGCCCACATCCTGCCAGGCATAGGGCATTGGATCCCACAGAGCAACCCCCAGGAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS CCA 72 bp CTGGGGGTTGCTCTGTGGGATCCAATGCCCTATGCCTaGCAGGATGTGGGCCTCCAAGCGGCCCGGCACAAA +
Preference number: 6 (lower is better)
Translates to: LGVALWDPMPYA*QDVGLQAARHK
Trigger: TTTGTGCCGGGCCGCTTGGAGGCCCACATCCTGCCAGGCATAGGGCATTGGATCCCACAGAGCAACCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS TCA 72 bp GCTCCGACAGAAAACAGCCAGAGCGCACCACTCACCTaGGTGCCAGGTAAACACCTGGGCGCGACAGGGACA +
Preference number: 6 (lower is better)
Translates to: APTENSQSAPLT*VPGKHLGATGT
Trigger: TGTCCCTGTCGCGCCCAGGTGTTTACCTGGCACTCAGGTGAGTGGTGCGCTCTGGCTGTTTTCTGTCGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221730.8
CDS GCA 72 bp CAGCAGGTCGATTGTGTAGCAGTCCACATCCCGAGGTaGATCCGAGGGGCCATAGCCTCGCAAGTCCACAGC +
Preference number: 6 (lower is better)
Translates to: QQVDCVAVHIPR*IRGAIASQVHS
Trigger: GCTGTGGACTTGCGAGGCTATGGCCCCTCGGATGCACCTCGGGATGTGGACTGCTACACAATCGACCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS TCA 72 bp ATCCTGGATCTTCAGTTAAGTGGGCGACACCTGGAGTaGGGGGCGGGGCATATGCAGAGTAGGTGCGGCCCA +
Preference number: 6 (lower is better)
Translates to: ILDLQLSGRHLE*GAGHMQSRCGP
Trigger: TGGGCCGCACCTACTCTGCATATGCCCCGCCCCTCACTCCAGGTGTCGCCCACTTAACTGAAGATCCAGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602233.5
CDS GCA 72 bp CGACAGAAAACAGCCAGAGCGCACCACTCACCTGAGTaGCAGGTAAACACCTGGGCGCGACAGGGACAGGAA +
Preference number: 6 (lower is better)
Translates to: RQKTARAHHSPE*QVNTWARQGQE
Trigger: TTCCTGTCCCTGTCGCGCCCAGGTGTTTACCTGGCACTCAGGTGAGTGGTGCGCTCTGGCTGTTTTCTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221730.8
CDS CCA 72 bp ATAAAGGAAGGCCTCGAGCTCGCTGGGGGTCAAGCATaGGATGCCTGTCTTGCGGTGGGTGAGGGTGGTCTT +
Preference number: 6 (lower is better)
Translates to: IKEGLELAGGQA*DACLAVGEGGL
Trigger: AAGACCACCCTCACCCACCGCAAGACAGGCATCCCATGCTTGACCCCCAGCGAGCTCGAGGCCTTCCTTTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS CCA 72 bp CCACATGTACTGGTGCATCTCCTGGGGGTTGCTCTGTaGGATCCAATGCCCTATGCCTGGCAGGATGTGGGC +
Preference number: 6 (lower is better)
Translates to: PHVLVHLLGVAL*DPMPYAWQDVG
Trigger: GCCCACATCCTGCCAGGCATAGGGCATTGGATCCCACAGAGCAACCCCCAGGAGATGCACCAGTACATGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS CAA 90 bp AGGTCTTGCAAGAAGGCCCACATGTACTGGTGCATCTCCTGGGGGTaGCTCTGTGGGATCCAATGCCCTATGCCTGGCAGGATGTGGGCC +
Preference number: 6 (lower is better)
Translates to: RSCKKAHMYWCISWG*LCGIQCPMPGRMWA
Trigger: GGCCCACATCCTGCCAGGCATAGGGCATTGGATCCCACAGAGCAACCCCCAGGAGATGCACCAGTACATGTGGGCCTTCTTGCAAGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS TCA 72 bp GGGAATAGTCTTGGTACACCGACATGGGGGCACCACTaGCCACAACCATCCGCTCGACCAGGGATGGGTAGT +
Preference number: 6 (lower is better)
Translates to: GNSLGTPTWGHH*PQPSARPGMGS
Trigger: ACTACCCATCCCTGGTCGAGCGGATGGTTGTGGTCAGTGGTGCCCCCATGTCGGTGTACCAAGACTATTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS TCA 72 bp ATCCTGGATCTTCAGTTAAGTGGGCGACACCTGGAGTaGGGGGCGGGGCATATGCAGAGTAGGTGCGGCCTA +
Preference number: 6 (lower is better)
Translates to: ILDLQLSGRHLE*GAGHMQSRCGL
Trigger: TAGGCCGCACCTACTCTGCATATGCCCCGCCCCTCACTCCAGGTGTCGCCCACTTAACTGAAGATCCAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435261.5
ENST00000594042.1
CDS GCA 72 bp AGAAGGCCCACATGTACTGGTGCATCTCCTGGGGGTTaGTCTGTGGGATCCAATGCCCTATGCCTGGCAGGA +
Preference number: 6 (lower is better)
Translates to: RRPTCTGASPGG*SVGSNALCLAG
Trigger: TCCTGCCAGGCATAGGGCATTGGATCCCACAGAGCAACCCCCAGGAGATGCACCAGTACATGTGGGCCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS CCA 72 bp GCTGTGAGAAGTTATAAAGGAAGGCCTCGAGCTCGCTaGGGGTCAAGCATGGGATGCCTGTCTTGCGGTGGG +
Preference number: 6 (lower is better)
Translates to: AVRSYKGRPRAR*GSSMGCLSCGG
Trigger: CCCACCGCAAGACAGGCATCCCATGCTTGACCCCCAGCGAGCTCGAGGCCTTCCTTTATAACTTCTCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS CAA 72 bp AAGAAGGCCCACATGTACTGGTGCATCTCCTGGGGGTaGCTCTGTGGGATCCAATGCCCTATGCCTGGCAGG +
Preference number: 6 (lower is better)
Translates to: KKAHMYWCISWG*LCGIQCPMPGR
Trigger: CCTGCCAGGCATAGGGCATTGGATCCCACAGAGCAACCCCCAGGAGATGCACCAGTACATGTGGGCCTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS GCA 72 bp TCCAGCAGGTCTTGCAAGAAGGCCCACATGTACTGGTaGATCTCCTGGGGGTTGCTCTGTGGGATCCAATGC +
Preference number: 6 (lower is better)
Translates to: SSRSCKKAHMYW*ISWGLLCGIQC
Trigger: GCATTGGATCCCACAGAGCAACCCCCAGGAGATGCACCAGTACATGTGGGCCTTCTTGCAAGACCTGCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS TCA 72 bp AGAACCAGTTCTCAGGGAAGCCGTGCAGAAACAGCATaGGGGGTCCGTTACCTCGTCCAGCCGAGACATAGT +
Preference number: 6 (lower is better)
Translates to: RTSSQGSRAETA*GVRYLVQPRHS
Trigger: ACTATGTCTCGGCTGGACGAGGTAACGGACCCCTCATGCTGTTTCTGCACGGCTTCCCTGAGAACTGGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000594042.1
ENST00000602233.5
CDS CCA 72 bp TCTTGCAAGAAGGCCCACATGTACTGGTGCATCTCCTaGGGGTTGCTCTGTGGGATCCAATGCCCTATGCCT +
Preference number: 6 (lower is better)
Translates to: SCKKAHMYWCIS*GLLCGIQCPMP
Trigger: AGGCATAGGGCATTGGATCCCACAGAGCAACCCCCAGGAGATGCACCAGTACATGTGGGCCTTCTTGCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5
CDS TCA 72 bp GGAACAGGAACATGTAGTGGGAACGGAAGAACTGGCTaGTGTGGTGCAGGGAATAGTCTTGGTACACCGACA +
Preference number: 6 (lower is better)
Translates to: GTGTCSGNGRTG*CGAGNSLGTPT
Trigger: TGTCGGTGTACCAAGACTATTCCCTGCACCACATCAGCCAGTTCTTCCGTTCCCACTACATGTTCCTGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221730.8
ENST00000435261.5
ENST00000602233.5