RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPHX2 (Homo sapiens)

Ensembl gene IDs: ENSG00000120915

Ensembl transcript IDs: ENST00000380476.7, ENST00000517536.5, ENST00000518328.5, ENST00000518379.5, ENST00000520623.5, ENST00000520666.1, ENST00000521400.6, ENST00000521684.1, ENST00000521780.5, ENST00000521924.1, ENST00000523326.1, ENST00000523827.1

Found 393 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCGGCAAGACCCGTGAGGAGGCTGCTGCTCCAGGACTCTGGGGCTaGAAGCAGGGCAGGGGAGAGACCACTGCAGGAGACACATCAGTG +
Preference number: 1 (lower is better)
Translates to: GGKTREEAAAPGLWG*KQGRGETTAGDTSV
Trigger: CACTGATGTGTCTCCTGCAGTGGTCTCTCCCCTGCCCTGCTTCCAGCCCCAGAGTCCTGGAGCAGCAGCCTCCTCACGGGTCTTGCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521400.6
3UTR CCA 90 bp CATGTGGGCGGCAAGACCCGTGAGGAGGCTGCTGCTCCAGGACTCTaGGGCTGGAAGCAGGGCAGGGGAGAGACCACTGCAGGAGACACA +
Preference number: 1 (lower is better)
Translates to: HVGGKTREEAAAPGL*GWKQGRGETTAGDT
Trigger: TGTGTCTCCTGCAGTGGTCTCTCCCCTGCCCTGCTTCCAGCCCCAGAGTCCTGGAGCAGCAGCCTCCTCACGGGTCTTGCCGCCCACATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
3UTR GCA 90 bp CCTGTGGCCAGTGACTGCTCTAGGGGACAGAGCACAAGACACCACTaGCATCCCCATAGGATTGTCTCCTGGCCAGCACGGCCTAGATCA +
Preference number: 1 (lower is better)
Translates to: PVASDCSRGQSTRHH*HPHRIVSWPARPRS
Trigger: TGATCTAGGCCGTGCTGGCCAGGAGACAATCCTATGGGGATGGCAGTGGTGTCTTGTGCTCTGTCCCCTAGAGCAGTCACTGGCCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521400.6
3UTR CCA 90 bp GGACAGAGCACAAGACACCACTGCCATCCCCATAGGATTGTCTCCTaGCCAGCACGGCCTAGATCATACAGCACCTTGGAGCCCAGAACA +
Preference number: 1 (lower is better)
Translates to: GQSTRHHCHPHRIVS*PARPRSYSTLEPRT
Trigger: TGTTCTGGGCTCCAAGGTGCTGTATGATCTAGGCCGTGCTGGCCAGGAGACAATCCTATGGGGATGGCAGTGGTGTCTTGTGCTCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
3UTR TCA 90 bp CAAAAGCAGAGGGAAAGGGTTCATCCCCATGCCGTGCATTCTCCGTaGACAGTCACTCCACCTCTCCAAGAACAAAGACAGCCAGCAGCA +
Preference number: 1 (lower is better)
Translates to: QKQRERVHPHAVHSP*TVTPPLQEQRQPAA
Trigger: TGCTGCTGGCTGTCTTTGTTCTTGGAGAGGTGGAGTGACTGTTCACGGAGAATGCACGGCATGGGGATGAACCCTTTCCCTCTGCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521400.6
3UTR TCA 90 bp AGCCTCACTAGCACATTTCAAATGCTCCAGGTGCACATTTGTGCCTaGGCAAACTCTGCTAGGGAAGCCGGGAGAAAGGCAGGTGGCTAC +
Preference number: 1 (lower is better)
Translates to: SLTSTFQMLQVHICA*ANSAREAGRKAGGY
Trigger: GTAGCCACCTGCCTTTCTCCCGGCTTCCCTAGCAGAGTTTGCTCAGGCACAAATGTGCACCTGGAGCATTTGAAATGTGCTAGTGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521400.6
3UTR GCA 90 bp AGAACAGGGCTCAAAAGCAGAGGGAAAGGGTTCATCCCCATGCCGTaGATTCTCCGTGAACAGTCACTCCACCTCTCCAAGAACAAAGAC +
Preference number: 1 (lower is better)
Translates to: RTGLKSRGKGFIPMP*ILREQSLHLSKNKD
Trigger: GTCTTTGTTCTTGGAGAGGTGGAGTGACTGTTCACGGAGAATGCACGGCATGGGGATGAACCCTTTCCCTCTGCTTTTGAGCCCTGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521400.6
3UTR-3UTR CCA 90 bp GGCGGCAAGACCCGTGAGGAGGCTGCTGCTCCAGGACTCTGGGGCTGGAAGCAGCATAGGATTGTCTCCTaGCCAGCACGGCCTAGATCA +
Preference number: 2 (lower is better)
Translates to: GGKTREEAAAPGLWGWKQHRIVS*PARPRS
Trigger: TGATCTAGGCCGTGCTGGCCAGGAGACAATCCTATG...CTGCTTCCAGCCCCAGAGTCCTGGAGCAGCAGCCTCCTCACGGGTCTTGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
3UTR CAA 90 bp GCTCTAGGGGACAGAGCACAAGACACCACTGCCATCCCCATAGGATaGTCTCCTGGCCAGCACGGCCTAGATCATACAGCACCTTGGAGC +
Preference number: 2 (lower is better)
Translates to: ALGDRAQDTTAIPIG*SPGQHGLDHTAPWS
Trigger: GCTCCAAGGTGCTGTATGATCTAGGCCGTGCTGGCCAGGAGACAATCCTATGGGGATGGCAGTGGTGTCTTGTGCTCTGTCCCCTAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521400.6
3UTR-3UTR TCA 90 bp GGATTGTCTCCTGGCCAGCACGGCCTAGATCATACAGCACCTTGGAGCCCAGAAGCCGTGCATTCTCCGTaGACAGTCACTCCACCTCTC +
Preference number: 2 (lower is better)
Translates to: GLSPGQHGLDHTAPWSPEAVHSP*TVTPPL
Trigger: GAGAGGTGGAGTGACTGTTCACGGAGAATGCACGGC...TTCTGGGCTCCAAGGTGCTGTATGATCTAGGCCGTGCTGGCCAGGAGACAATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521400.6
3UTR-3UTR CCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCATGGTGCCCCAGCAGGTaGAAGGATGGCACACCTGCT +
Preference number: 2 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSWCPSR*KDGTPA
Trigger: AGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCA...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
3UTR-3UTR GCA 90 bp CACGGCCTAGATCATACAGCACCTTGGAGCCCAGAACAGGGCTCAAAAGCAGAGACCCCTTCAGAACAATaGTGCCATCCATGCAAGATG +
Preference number: 2 (lower is better)
Translates to: HGLDHTAPWSPEQGSKAETPSEQ*CHPCKM
Trigger: CATCTTGCATGGATGGCAGCATTGTTCTGAAGGGGT...CTCTGCTTTTGAGCCCTGTTCTGGGCTCCAAGGTGCTGTATGATCTAGGCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521400.6
3UTR-3UTR TCA 90 bp AAAGGGTTCATCCCCATGCCGTGCATTCTCCGTGAACAGTCACTCCACCTCTCCAGAACTAATCACACCTaGTTTCTCTGGGATCTAAAA +
Preference number: 2 (lower is better)
Translates to: KGFIPMPCILREQSLHLSRTNHT*FLWDLK
Trigger: TTTTAGATCCCAGAGAAATCAGGTGTGATTAGTTCT...GGAGAGGTGGAGTGACTGTTCACGGAGAATGCACGGCATGGGGATGAACCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
3UTR-3UTR GCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCACAATGCTGCCATCCATaGAAGATGTGTGTAAGGCCA +
Preference number: 2 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSQCCHP*KMCVRP
Trigger: TGGCCTTACACACATCTTGCATGGATGGCAGCATTG...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
3UTR-3UTR GCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCAACCCCTTCAGAACAATaGTGCCATCCATGCAAGATG +
Preference number: 2 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSTPSEQ*CHPCKM
Trigger: CATCTTGCATGGATGGCAGCATTGTTCTGAAGGGGT...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
3UTR-3UTR GCA 90 bp TCTTCCTCAGCCTCACTAGCACATTTCAAATGCTCCAGGTGCACATTTGTGCCTCAGATAAAGGGACGATaGATTCATGCCTGGAGAACT +
Preference number: 2 (lower is better)
Translates to: SSSASLAHFKCSRCTFVPQIKGR*IHAWRT
Trigger: AGTTCTCCAGGCATGAATGCATCGTCCCTTTATCTG...AGGCACAAATGTGCACCTGGAGCATTTGAAATGTGCTAGTGAGGCTGAGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521400.6
3UTR-3UTR GCA 90 bp AAAGGGTTCATCCCCATGCCGTGCATTCTCCGTGAACAGTCACTCCACCTCTCCTTTTCTGCCAAACTATaGATTGGTCAAAGAGAAATC +
Preference number: 2 (lower is better)
Translates to: KGFIPMPCILREQSLHLSFSAKL*IGQREI
Trigger: GATTTCTCTTTGACCAATGCATAGTTTGGCAGAAAA...GGAGAGGTGGAGTGACTGTTCACGGAGAATGCACGGCATGGGGATGAACCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521400.6
3UTR-3UTR TCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCAAGAACTAATCACACCTaGTTTCTCTGGGATCTAAAA +
Preference number: 2 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSRTNHT*FLWDLK
Trigger: TTTTAGATCCCAGAGAAATCAGGTGTGATTAGTTCT...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
3UTR GCA 72 bp CGGGAGAAAGGCAGGTGGCTACCTGTGGCCAGTGACTaGTCTAGGGGACAGAGCACAAGACACCACTGCCAT +
Preference number: 3 (lower is better)
Translates to: REKGRWLPVASD*SRGQSTRHHCH
Trigger: ATGGCAGTGGTGTCTTGTGCTCTGTCCCCTAGAGCAGTCACTGGCCACAGGTAGCCACCTGCCTTTCTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
3UTR CCA 72 bp ACAAGACACCACTGCCATCCCCATAGGATTGTCTCCTaGCCAGCACGGCCTAGATCATACAGCACCTTGGAG +
Preference number: 3 (lower is better)
Translates to: TRHHCHPHRIVS*PARPRSYSTLE
Trigger: CTCCAAGGTGCTGTATGATCTAGGCCGTGCTGGCCAGGAGACAATCCTATGGGGATGGCAGTGGTGTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
3UTR GCA 72 bp CTCAAAAGCAGAGGGAAAGGGTTCATCCCCATGCCGTaGATTCTCCGTGAACAGTCACTCCACCTCTCCAAG +
Preference number: 3 (lower is better)
Translates to: LKSRGKGFIPMP*ILREQSLHLSK
Trigger: CTTGGAGAGGTGGAGTGACTGTTCACGGAGAATGCACGGCATGGGGATGAACCCTTTCCCTCTGCTTTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521400.6
3UTR TCA 72 bp AGGGAAAGGGTTCATCCCCATGCCGTGCATTCTCCGTaGACAGTCACTCCACCTCTCCAAGAACAAAGACAG +
Preference number: 3 (lower is better)
Translates to: RERVHPHAVHSP*TVTPPLQEQRQ
Trigger: CTGTCTTTGTTCTTGGAGAGGTGGAGTGACTGTTCACGGAGAATGCACGGCATGGGGATGAACCCTTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
3UTR-3UTR CAA 90 bp TCTTCCTCAGCCTCACTAGCACATTTCAAATGCTCCAGGTGCACATTTGTGCCTAGATCATACAGCACCTaGGAGCCCAGAACAGGGCTC +
Preference number: 3 (lower is better)
Translates to: SSSASLAHFKCSRCTFVPRSYST*EPRTGL
Trigger: GAGCCCTGTTCTGGGCTCCAAGGTGCTGTATGATCT...AGGCACAAATGTGCACCTGGAGCATTTGAAATGTGCTAGTGAGGCTGAGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521400.6
3UTR TCA 72 bp AGCACATTTCAAATGCTCCAGGTGCACATTTGTGCCTaGGCAAACTCTGCTAGGGAAGCCGGGAGAAAGGCA +
Preference number: 3 (lower is better)
Translates to: STFQMLQVHICA*ANSAREAGRKA
Trigger: TGCCTTTCTCCCGGCTTCCCTAGCAGAGTTTGCTCAGGCACAAATGTGCACCTGGAGCATTTGAAATGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521400.6
3UTR GCA 72 bp TCCTCAGCCTCACTAGCACATTTCAAATGCTCCAGGTaGACATTTGTGCCTGAGCAAACTCTGCTAGGGAAG +
Preference number: 3 (lower is better)
Translates to: SSASLAHFKCSR*TFVPEQTLLGK
Trigger: CTTCCCTAGCAGAGTTTGCTCAGGCACAAATGTGCACCTGGAGCATTTGAAATGTGCTAGTGAGGCTGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521400.6
3UTR GCA 72 bp TTTCTGCAAACCCCTTCAGAACAATGCTGCCATCCATaGAAGATGTGTGTAAGGCCACCTCTGTATACTAAG +
Preference number: 3 (lower is better)
Translates to: FLQTPSEQCCHP*KMCVRPPLYTK
Trigger: CTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAAGGGGTTTGCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp GGCGGCAAGACCCGTGAGGAGGCTGCTGCTCCAGGACTCTGGGGCTGGAAGCAGCCCAGTCATGGCCAATaGACACTGCTTGAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GGKTREEAAAPGLWGWKQPSHGQ*TLLERG
Trigger: GCCTCTCTCAAGCAGTGTTCATTGGCCATGACTGGG...CTGCTTCCAGCCCCAGAGTCCTGGAGCAGCAGCCTCCTCACGGGTCTTGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR GCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGCCAGGGCCTCCTCCGTaGGGCCGAGGACGCCGAACA +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLPGPPP*GRGRRT
Trigger: TGTTCGGCGTCCTCGGCCGCACGGAGGAGGCCCTGG...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CCCATGCCGTGCATTCTCCGTGAACAGTCACTCCACCTCTCCAAGAACAAAGACCCGCGCGCAGCGTCATaGCGGCGGGTCTGCAGCCTA +
Preference number: 4 (lower is better)
Translates to: PMPCILREQSLHLSKNKDPRAAS*RRVCSL
Trigger: TAGGCTGCAGACCCGCCGCCATGACGCTGCGCGCGG...GTCTTTGTTCTTGGAGAGGTGGAGTGACTGTTCACGGAGAATGCACGGCATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CCA 90 bp GGCGGCAAGACCCGTGAGGAGGCTGCTGCTCCAGGACTCTGGGGCTGGAAGCAGGGGGTATTGAGAAGCTaGATTCCGGTCACTTTCTCC +
Preference number: 4 (lower is better)
Translates to: GGKTREEAAAPGLWGWKQGVLRS*IPVTFS
Trigger: GGAGAAAGTGACCGGAATCCAGCTTCTCAATACCCC...CTGCTTCCAGCCCCAGAGTCCTGGAGCAGCAGCCTCCTCACGGGTCTTGCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR GCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGTCATGGCGGCGGGTCTaGAGCCTAGCACCCGGACAC +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLSWRRV*SLAPGH
Trigger: GTGTCCGGGTGCTAGGCTGCAGACCCGCCGCCATGA...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGCGACCTCACTGGGGCTaGCCTTCAGGGTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLRPHWG*PSGCPA
Trigger: TGCTGGACACCCTGAAGGCCAGCCCCAGTGAGGTCG...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGAGTCCTTCTCCGCCGTaGCCATCAGGGCCGGAATCA +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLSPSPP*PSGPES
Trigger: TGATTCCGGCCCTGATGGTCACGGCGGAGAAGGACT...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp TGCATTCTCCGTGAACAGTCACTCCACCTCTCCAAGAACAAAGACAGCCAGCAGTCATGGCGGCGGGTCTaGAGCCTAGCACCCGGACAC +
Preference number: 4 (lower is better)
Translates to: CILREQSLHLSKNKDSQQSWRRV*SLAPGH
Trigger: GTGTCCGGGTGCTAGGCTGCAGACCCGCCGCCATGA...CTGCTGGCTGTCTTTGTTCTTGGAGAGGTGGAGTGACTGTTCACGGAGAATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR GCA 90 bp CACGGCCTAGATCATACAGCACCTTGGAGCCCAGAACAGGGCTCAAAAGCAGAGCCTGAGCATGAGAGCTaGCTGGAGCATGGGGCGGTT +
Preference number: 4 (lower is better)
Translates to: HGLDHTAPWSPEQGSKAEPEHES*LEHGAV
Trigger: AACCGCCCCATGCTCCAGGCAGCTCTCATGCTCAGG...CTCTGCTTTTGAGCCCTGTTCTGGGCTCCAAGGTGCTGTATGATCTAGGCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR GCA 90 bp GGCGGCAAGACCCGTGAGGAGGCTGCTGCTCCAGGACTCTGGGGCTGGAAGCAGATCAGGAAGTCAAAGTaGATCTTCAGCTCACACATC +
Preference number: 4 (lower is better)
Translates to: GGKTREEAAAPGLWGWKQIRKSK*IFSSHI
Trigger: GATGTGTGAGCTGAAGATGCACTTTGACTTCCTGAT...CTGCTTCCAGCCCCAGAGTCCTGGAGCAGCAGCCTCCTCACGGGTCTTGCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCACCGCGCGCAGCGTCATaGCGGCGGGTCTGCAGCCTA +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPPRAAS*RRVCSL
Trigger: TAGGCTGCAGACCCGCCGCCATGACGCTGCGCGCGG...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCAGACGCCGAACACCGCTaGCAGCGCCAGCACCCCGTC +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSDAEHR*QRQHPV
Trigger: GACGGGGTGCTGGCGCTGCCAGCGGTGTTCGGCGTC...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGTGGTGCCCCAGCAGGTaGAAGGATGGCACACCTGCT +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLWCPSR*KDGTPA
Trigger: AGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCA...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CACGGCCTAGATCATACAGCACCTTGGAGCCCAGAACAGGGCTCAAAAGCAGAGTGGTGCCCCAGCAGGTaGAAGGATGGCACACCTGCT +
Preference number: 4 (lower is better)
Translates to: HGLDHTAPWSPEQGSKAEWCPSR*KDGTPA
Trigger: AGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCA...CTCTGCTTTTGAGCCCTGTTCTGGGCTCCAAGGTGCTGTATGATCTAGGCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CCA 90 bp CACGGCCTAGATCATACAGCACCTTGGAGCCCAGAACAGGGCTCAAAAGCAGAGCATTCAGAAGTCCTCTaGGCAGCGCCAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: HGLDHTAPWSPEQGSKAEHSEVL*AAPGPP
Trigger: AGGAGGCCCTGGCGCTGCCCAGAGGACTTCTGAATG...CTCTGCTTTTGAGCCCTGTTCTGGGCTCCAAGGTGCTGTATGATCTAGGCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGGACACGCAGCTAACCTaGGAGATGCGCGAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLDTQLT*EMREGQ
Trigger: CTGGCCTTCGCGCATCTCCCAGGTTAGCTGCGTGTC...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517536.5
ENST00000521400.6
CDS-3UTR CCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGATGAGTGGTATCCACTaGGCAGCGCCAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLMSGIH*AAPGPP
Trigger: AGGAGGCCCTGGCGCTGCCCAGTGGATACCACTCAT...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521780.5
CDS-3UTR CCA 90 bp CACGGCCTAGATCATACAGCACCTTGGAGCCCAGAACAGGGCTCAAAAGCAGAGCGGGAGAAAGGCAGGTaGCTACCTGTGGCCAGTGAC +
Preference number: 4 (lower is better)
Translates to: HGLDHTAPWSPEQGSKAEREKGR*LPVASD
Trigger: GTCACTGGCCACAGGTAGCCACCTGCCTTTCTCCCG...CTCTGCTTTTGAGCCCTGTTCTGGGCTCCAAGGTGCTGTATGATCTAGGCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR TCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGGCCGTGCATTCTCCGTaGACAGTCACTCCACCTCTC +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLAVHSP*TVTPPL
Trigger: GAGAGGTGGAGTGACTGTTCACGGAGAATGCACGGC...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR GCA 90 bp AAAGGGTTCATCCCCATGCCGTGCATTCTCCGTGAACAGTCACTCCACCTCTCCCCTGTGGCCAGTGACTaGTCTAGGGGACAGAGCACA +
Preference number: 4 (lower is better)
Translates to: KGFIPMPCILREQSLHLSPVASD*SRGQST
Trigger: TGTGCTCTGTCCCCTAGAGCAGTCACTGGCCACAGG...GGAGAGGTGGAGTGACTGTTCACGGAGAATGCACGGCATGGGGATGAACCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR GCA 90 bp AAAGGGTTCATCCCCATGCCGTGCATTCTCCGTGAACAGTCACTCCACCTCTCCAGTTGGGGGAGGCCCTaGGAGTTTCAGGATCCAACC +
Preference number: 4 (lower is better)
Translates to: KGFIPMPCILREQSLHLSSWGRP*EFQDPT
Trigger: GGTTGGATCCTGAAACTCGCAGGGCCTCCCCCAACT...GGAGAGGTGGAGTGACTGTTCACGGAGAATGCACGGCATGGGGATGAACCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CCA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACCCGCGCGCAGCGTCATaGCGGCGGGTCTGCAGCCTA +
Preference number: 4 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYPRAAS*RRVCSL
Trigger: TAGGCTGCAGACCCGCCGCCATGACGCTGCGCGCGG...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACGACGCCGAACACCGCTaGCAGCGCCAGCACCCCGTC +
Preference number: 4 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYDAEHR*QRQHPV
Trigger: GACGGGGTGCTGGCGCTGCCAGCGGTGTTCGGCGTC...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCAGGTAGTGGCACCCTCTaGGCAGCGCCAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPGSGTL*AAPGPP
Trigger: AGGAGGCCCTGGCGCTGCCCAGAGGGTGCCACTACC...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380476.7
CDS-3UTR CCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGAGCATGAGAGCTGCCTaGAGCATGGGGCGGTTGATC +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLSMRAA*SMGRLI
Trigger: GATCAACCGCCCCATGCTCCAGGCAGCTCTCATGCT...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGCTCTCGGGAAATCCATaGCAGAGGCACACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLLSGNP*QRHTAG
Trigger: CCCTGCTGTGTGCCTCTGCCATGGATTTCCCGAGAG...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp AAAGGGTTCATCCCCATGCCGTGCATTCTCCGTGAACAGTCACTCCACCTCTCCCTCTCGGGAAATCCATaGCAGAGGCACACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: KGFIPMPCILREQSLHLSLSGNP*QRHTAG
Trigger: CCCTGCTGTGTGCCTCTGCCATGGATTTCCCGAGAG...GGAGAGGTGGAGTGACTGTTCACGGAGAATGCACGGCATGGGGATGAACCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR TCA 90 bp GGATTGTCTCCTGGCCAGCACGGCCTAGATCATACAGCACCTTGGAGCCCAGAATCTGAGGTTCAGGTTTaGCCATTCCCACCTGACACG +
Preference number: 4 (lower is better)
Translates to: GLSPGQHGLDHTAPWSPESEVQV*PFPPDT
Trigger: CGTGTCAGGTGGGAATGGTCAAACCTGAACCTCAGA...TTCTGGGCTCCAAGGTGCTGTATGATCTAGGCCGTGCTGGCCAGGAGACAATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR TCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGCCCAGTCATGGCCAATaGACACTGCTTGAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLPSHGQ*TLLERG
Trigger: GCCTCTCTCAAGCAGTGTTCATTGGCCATGACTGGG...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGATGTGCTGGGACATCTaGGGAACGAGCACGAAGTCC +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLMCWDI*GTSTKS
Trigger: GGACTTCGTGCTCGTTCCTCAGATGTCCCAGCACAT...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGTGCGTTCTACATCTTTaGGACCACCGGTGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLCVLHL*DHRWVP
Trigger: CGGAACCCACCGGTGGTCTCAAAGATGTAGAACGCA...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCATCATGGCGGCGGGTCTaGAGCCTAGCACCCGGACAC +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSSWRRV*SLAPGH
Trigger: GTGTCCGGGTGCTAGGCTGCAGACCCGCCGCCATGA...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCATCATGGCGGCGGGTCTaGAGCCTAGCACCCGGACAC +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPSWRRV*SLAPGH
Trigger: GTGTCCGGGTGCTAGGCTGCAGACCCGCCGCCATGA...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGCCCAGCTCCACAAAATaGAGACGGACCCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLPSSTK*RRTLGF
Trigger: AAAGCCCAGGGTCCGTCTGCATTTTGTGGAGCTGGG...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380476.7
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGTGTACCACACCAGCATaGCACCCCAGTCATGGCCAA +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLCTTPA*HPSHGQ
Trigger: TTGGCCATGACTGGGGTGGCATGCTGGTGTGGTACA...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CCCATGCCGTGCATTCTCCGTGAACAGTCACTCCACCTCTCCAAGAACAAAGACAGCATGAGAGCTGCCTaGAGCATGGGGCGGTTGATC +
Preference number: 4 (lower is better)
Translates to: PMPCILREQSLHLSKNKDSMRAA*SMGRLI
Trigger: GATCAACCGCCCCATGCTCCAGGCAGCTCTCATGCT...GTCTTTGTTCTTGGAGAGGTGGAGTGACTGTTCACGGAGAATGCACGGCATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGGCCGTGTCAGTGTCCTaGACCAGGATGGTGACCATT +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLAVSVS*TRMVTI
Trigger: AATGGTCACCATCCTGGTCCAGGACACTGACACGGC...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGAGAGAAATCACCACCTaGCCACCCCATTCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLREITT*PPHSVP
Trigger: GGGGACAGAATGGGGTGGCCAGGTGGTGATTTCTCT...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp TGCATTCTCCGTGAACAGTCACTCCACCTCTCCAAGAACAAAGACAGCCAGCAGGCAGGTGGCTACCTGTaGCCAGTGACTGCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: CILREQSLHLSKNKDSQQAGGYL*PVTALG
Trigger: CCCTAGAGCAGTCACTGGCCACAGGTAGCCACCTGC...CTGCTGGCTGTCTTTGTTCTTGGAGAGGTGGAGTGACTGTTCACGGAGAATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CCA 90 bp CACGGCCTAGATCATACAGCACCTTGGAGCCCAGAACAGGGCTCAAAAGCAGAGGAGGGGAAGATGAGCTaGATCTGCCTGAGCCTCATG +
Preference number: 4 (lower is better)
Translates to: HGLDHTAPWSPEQGSKAEEGKMS*ICLSLM
Trigger: CATGAGGCTCAGGCAGATCCAGCTCATCTTCCCCTC...CTCTGCTTTTGAGCCCTGTTCTGGGCTCCAAGGTGCTGTATGATCTAGGCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CCA 90 bp TGCATTCTCCGTGAACAGTCACTCCACCTCTCCAAGAACAAAGACAGCCAGCAGCAGGATCCAACCATGTaGGCGGCAAGACCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: CILREQSLHLSKNKDSQQQDPTM*AARPVR
Trigger: CCTCACGGGTCTTGCCGCCCACATGGTTGGATCCTG...CTGCTGGCTGTCTTTGTTCTTGGAGAGGTGGAGTGACTGTTCACGGAGAATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CCA 90 bp TCTTCCTCAGCCTCACTAGCACATTTCAAATGCTCCAGGTGCACATTTGTGCCTGTGGGCAGGGGCAGTTaGGGGAGGCCCTGCGAGTTT +
Preference number: 4 (lower is better)
Translates to: SSSASLAHFKCSRCTFVPVGRGS*GRPCEF
Trigger: AAACTCGCAGGGCCTCCCCCAACTGCCCCTGCCCAC...AGGCACAAATGTGCACCTGGAGCATTTGAAATGTGCTAGTGAGGCTGAGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521400.6
3UTR CAA 72 bp GACAGAGCACAAGACACCACTGCCATCCCCATAGGATaGTCTCCTGGCCAGCACGGCCTAGATCATACAGCA +
Preference number: 4 (lower is better)
Translates to: DRAQDTTAIPIG*SPGQHGLDHTA
Trigger: TGCTGTATGATCTAGGCCGTGCTGGCCAGGAGACAATCCTATGGGGATGGCAGTGGTGTCTTGTGCTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR TCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGTCTGAGGTTCAGGTTTaGCCATTCCCACCTGACACG +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLSEVQV*PFPPDT
Trigger: CGTGTCAGGTGGGAATGGTCAAACCTGAACCTCAGA...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp AAAGGGTTCATCCCCATGCCGTGCATTCTCCGTGAACAGTCACTCCACCTCTCCTCATGTCACTTGGATTaGAAGAGGTCGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: KGFIPMPCILREQSLHLSSCHLD*KRSAEG
Trigger: CCCCTCTGCCGACCTCTTGCAATCCAAGTGACATGA...GGAGAGGTGGAGTGACTGTTCACGGAGAATGCACGGCATGGGGATGAACCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR GCA 90 bp GGATTGTCTCCTGGCCAGCACGGCCTAGATCATACAGCACCTTGGAGCCCAGAATTCATCCCCATGCCGTaGATTCTCCGTGAACAGTCA +
Preference number: 4 (lower is better)
Translates to: GLSPGQHGLDHTAPWSPEFIPMP*ILREQS
Trigger: TGACTGTTCACGGAGAATGCACGGCATGGGGATGAA...TTCTGGGCTCCAAGGTGCTGTATGATCTAGGCCGTGCTGGCCAGGAGACAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGAGCCTCAGCCACTCCTaGTTCTTGGAAGTAGAGCTG +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLSLSHS*FLEVEL
Trigger: CAGCTCTACTTCCAAGAACCAGGAGTGGCTGAGGCT...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CACGGCCTAGATCATACAGCACCTTGGAGCCCAGAACAGGGCTCAAAAGCAGAGAGCCTCAGCCACTCCTaGTTCTTGGAAGTAGAGCTG +
Preference number: 4 (lower is better)
Translates to: HGLDHTAPWSPEQGSKAESLSHS*FLEVEL
Trigger: CAGCTCTACTTCCAAGAACCAGGAGTGGCTGAGGCT...CTCTGCTTTTGAGCCCTGTTCTGGGCTCCAAGGTGCTGTATGATCTAGGCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGTGTCCCCTTTTCAGGTaGGGAATCCAGTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLCPLFR*GIQSSM
Trigger: CATGGAGGACTGGATTCCCCACCTGAAAAGGGGACA...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CACGGCCTAGATCATACAGCACCTTGGAGCCCAGAACAGGGCTCAAAAGCAGAGGATCATACAGCACCTTaGAGCCCAGAACAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: HGLDHTAPWSPEQGSKAEDHTAP*SPEQGS
Trigger: TGAGCCCTGTTCTGGGCTCCAAGGTGCTGTATGATC...CTCTGCTTTTGAGCCCTGTTCTGGGCTCCAAGGTGCTGTATGATCTAGGCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CCA 90 bp AAAGGGTTCATCCCCATGCCGTGCATTCTCCGTGAACAGTCACTCCACCTCTCCCATAGGATTGTCTCCTaGCCAGCACGGCCTAGATCA +
Preference number: 4 (lower is better)
Translates to: KGFIPMPCILREQSLHLSHRIVS*PARPRS
Trigger: TGATCTAGGCCGTGCTGGCCAGGAGACAATCCTATG...GGAGAGGTGGAGTGACTGTTCACGGAGAATGCACGGCATGGGGATGAACCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR TCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCACCTGGACCAGGATGGTaGCCATTCCCAAGTCACGGG +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSPGPGW*PFPSHG
Trigger: CCCGTGACTTGGGAATGGTCACCATCCTGGTCCAGG...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCACCTGGACCAGGATGGTaGCCATTCCCAAGTCACGGG +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPPGPGW*PFPSHG
Trigger: CCCGTGACTTGGGAATGGTCACCATCCTGGTCCAGG...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCAGAGGGGCCGGGGTATTaGGAAGCTGGATTCCGGTCA +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSEGPGY*EAGFRS
Trigger: TGACCGGAATCCAGCTTCTCAATACCCCGGCCCCTC...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCAAGTCCTTCTCCGCCGTaGCCATCAGGGCCGGAATCA +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSSPSPP*PSGPES
Trigger: TGATTCCGGCCCTGATGGTCACGGCGGAGAAGGACT...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp TGCATTCTCCGTGAACAGTCACTCCACCTCTCCAAGAACAAAGACAGCCAGCAGTGCGTTCTACATCTTTaGGACCACCGGTGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: CILREQSLHLSKNKDSQQCVLHL*DHRWVP
Trigger: CGGAACCCACCGGTGGTCTCAAAGATGTAGAACGCA...CTGCTGGCTGTCTTTGTTCTTGGAGAGGTGGAGTGACTGTTCACGGAGAATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR TCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGTGCAGTTTTCTTCCATaGGTGGTATCCACTGGGCAG +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLCSFLP*VVSTGQ
Trigger: CTGCCCAGTGGATACCACTCATGGAAGAAAACTGCA...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521780.5
CDS-3UTR GCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCACCTGAGCATGAGAGCTaGCTGGAGCATGGGGCGGTT +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSPEHES*LEHGAV
Trigger: AACCGCCCCATGCTCCAGGCAGCTCTCATGCTCAGG...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCACCCAGCTCCACAAAATaGAGACGGACCCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSPSSTK*RRTLGW
Trigger: CCAGCCCAGGGTCCGTCTGCATTTTGTGGAGCTGGG...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517536.5
CDS-3UTR GCA 90 bp CCCATGCCGTGCATTCTCCGTGAACAGTCACTCCACCTCTCCAAGAACAAAGACAAGGGTTCATCCCCATaGCGTGCATTCTCCGTGAAC +
Preference number: 4 (lower is better)
Translates to: PMPCILREQSLHLSKNKDKGSSP*RAFSVN
Trigger: GTTCACGGAGAATGCACGGCATGGGGATGAACCCTT...GTCTTTGTTCTTGGAGAGGTGGAGTGACTGTTCACGGAGAATGCACGGCATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTCGACCTCACTGGGGCTaGCCTTCAGGGTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGRPHWG*PSGCPA
Trigger: TGCTGGACACCCTGAAGGCCAGCCCCAGTGAGGTCG...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp TGCATTCTCCGTGAACAGTCACTCCACCTCTCCAAGAACAAAGACAGCCAGCAGTCCCAAGTCACGGGCTaGCTTCAGATTAGCCCCGAT +
Preference number: 4 (lower is better)
Translates to: CILREQSLHLSKNKDSQQSQVTG*LQISPD
Trigger: ATCGGGGCTAATCTGAAGCCAGCCCGTGACTTGGGA...CTGCTGGCTGTCTTTGTTCTTGGAGAGGTGGAGTGACTGTTCACGGAGAATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGGGGGTATTGAGAAGCTaGATTCCGGTCACTTTCTCC +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLGVLRS*IPVTFS
Trigger: GGAGAAAGTGACCGGAATCCAGCTTCTCAATACCCC...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGATGGCTCATGTCACTTaGATTGCAAGAGGTCGGCAG +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLMAHVT*IARGRQ
Trigger: CTGCCGACCTCTTGCAATCCAAGTGACATGAGCCAT...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGGCCAGAGCAGGGATCTaGTACCTCCAAGAATACCAA +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLARAGI*YLQEYQ
Trigger: TTGGTATTCTTGGAGGTACCAGATCCCTGCTCTGGC...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CCCATGCCGTGCATTCTCCGTGAACAGTCACTCCACCTCTCCAAGAACAAAGACAGGGAGTATTCAAACTaGCCACCGCCCTCACTCTCT +
Preference number: 4 (lower is better)
Translates to: PMPCILREQSLHLSKNKDREYSN*PPPSLS
Trigger: AGAGAGTGAGGGCGGTGGCCAGTTTGAATACTCCCT...GTCTTTGTTCTTGGAGAGGTGGAGTGACTGTTCACGGAGAATGCACGGCATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CCA 90 bp CCCATGCCGTGCATTCTCCGTGAACAGTCACTCCACCTCTCCAAGAACAAAGACTGTCCCCTTTTCAGGTaGGGAATCCAGTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: PMPCILREQSLHLSKNKDCPLFR*GIQSSM
Trigger: CATGGAGGACTGGATTCCCCACCTGAAAAGGGGACA...GTCTTTGTTCTTGGAGAGGTGGAGTGACTGTTCACGGAGAATGCACGGCATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCACATTCAGAAGTCCTCTaGGCAGCGCCAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPHSEVL*AAPGPP
Trigger: AGGAGGCCCTGGCGCTGCCCAGAGGACTTCTGAATG...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
CDS-3UTR CCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCACATTCAGAAGTCCTCTaGGCAGCGCCAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSHSEVL*AAPGPP
Trigger: AGGAGGCCCTGGCGCTGCCCAGAGGACTTCTGAATG...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
CDS-3UTR CCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCAGACACGCAGCTAACCTaGGAGATGCGCGAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSDTQLT*EMREGQ
Trigger: CTGGCCTTCGCGCATCTCCCAGGTTAGCTGCGTGTC...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517536.5
ENST00000521400.6
CDS-3UTR TCA 90 bp GGATTGTCTCCTGGCCAGCACGGCCTAGATCATACAGCACCTTGGAGCCCAGAATGCAGTTTTCTTCCATaGGTGGTATCCACTGGGAAA +
Preference number: 4 (lower is better)
Translates to: GLSPGQHGLDHTAPWSPECSFLP*VVSTGK
Trigger: TTTCCCAGTGGATACCACTCATGGAAGAAAACTGCA...TTCTGGGCTCCAAGGTGCTGTATGATCTAGGCCGTGCTGGCCAGGAGACAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR TCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTCCTGGACCAGGATGGTaGCCATTCCCAAGTCACGGG +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGPGPGW*PFPSHG
Trigger: CCCGTGACTTGGGAATGGTCACCATCCTGGTCCAGG...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACGAGGGGCCGGGGTATTaGGAAGCTGGATTCCGGTCA +
Preference number: 4 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYEGPGY*EAGFRS
Trigger: TGACCGGAATCCAGCTTCTCAATACCCCGGCCCCTC...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTAGTCCTTCTCCGCCGTaGCCATCAGGGCCGGAATCA +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGSPSPP*PSGPES
Trigger: TGATTCCGGCCCTGATGGTCACGGCGGAGAAGGACT...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACAGTCCTTCTCCGCCGTaGCCATCAGGGCCGGAATCA +
Preference number: 4 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYSPSPP*PSGPES
Trigger: TGATTCCGGCCCTGATGGTCACGGCGGAGAAGGACT...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACCCTGAGCATGAGAGCTaGCTGGAGCATGGGGCGGTT +
Preference number: 4 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYPEHES*LEHGAV
Trigger: AACCGCCCCATGCTCCAGGCAGCTCTCATGCTCAGG...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGATGGCCAATGAACACTaGTTGAGAGAGGCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLMANEH*LREAQF
Trigger: AAACTGGGCCTCTCTCAAGCAGTGTTCATTGGCCAT...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp CACGGCCTAGATCATACAGCACCTTGGAGCCCAGAACAGGGCTCAAAAGCAGAGATGGCCAATGAACACTaGTTGAGAGAGGCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: HGLDHTAPWSPEQGSKAEMANEH*LREAQF
Trigger: AAACTGGGCCTCTCTCAAGCAGTGTTCATTGGCCAT...CTCTGCTTTTGAGCCCTGTTCTGGGCTCCAAGGTGCTGTATGATCTAGGCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR GCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGCAATGCTGCCATCCATaGAAGATGTGTGTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLQCCHP*KMCVRP
Trigger: TGGCCTTACACACATCTTGCATGGATGGCAGCATTG...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGACCCCTTCAGAACAATaGTGCCATCCATGCAAGATG +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLTPSEQ*CHPCKM
Trigger: CATCTTGCATGGATGGCAGCATTGTTCTGAAGGGGT...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CCCATGCCGTGCATTCTCCGTGAACAGTCACTCCACCTCTCCAAGAACAAAGACATGGCTCATGTCACTTaGATTGCAAGAGGTCGGCAG +
Preference number: 4 (lower is better)
Translates to: PMPCILREQSLHLSKNKDMAHVT*IARGRQ
Trigger: CTGCCGACCTCTTGCAATCCAAGTGACATGAGCCAT...GTCTTTGTTCTTGGAGAGGTGGAGTGACTGTTCACGGAGAATGCACGGCATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCACTCTCGGGAAATCCATaGCAGAGGCACACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPLSGNP*QRHTAG
Trigger: CCCTGCTGTGTGCCTCTGCCATGGATTTCCCGAGAG...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTTGGTGCCCCAGCAGGTaGAAGGATGGCACACCTGCT +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGWCPSR*KDGTPA
Trigger: AGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCA...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCAGGTAGTGGCACCCTCTaGTCCCCCTTTCTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPGSGTL*SPFLES
Trigger: GCTTTCCAGAAAGGGGGACCAGAGGGTGCCACTACC...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
CDS-3UTR CCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCAGGTAGTGGCACCCTCTaGTCCCCCTTTCTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSGSGTL*SPFLES
Trigger: GCTTTCCAGAAAGGGGGACCAGAGGGTGCCACTACC...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
CDS-3UTR TCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCAGGAGCATGGGGCGGTTaGTCTTTCTGGCTGAAATCG +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPGAWGG*SFWLKS
Trigger: CGATTTCAGCCAGAAAGATCAACCGCCCCATGCTCC...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCACCCAGTCATGGCCAATaGACACTGCTTGAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPPSHGQ*TLLERG
Trigger: GCCTCTCTCAAGCAGTGTTCATTGGCCATGACTGGG...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGTGGGATTTGCTGGTATaGAGGGAGTATTCAAACTGG +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLWDLLV*REYSNW
Trigger: CCAGTTTGAATACTCCCTTCATACCAGCAAATCCCA...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCAATGTGCTGGGACATCTaGGGAACGAGCACGAAGTCC +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPMCWDI*GTSTKS
Trigger: GGACTTCGTGCTCGTTCCTCAGATGTCCCAGCACAT...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp TCTTCCTCAGCCTCACTAGCACATTTCAAATGCTCCAGGTGCACATTTGTGCCTATGTGCTGGGACATCTaGGGAACGAGCACGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SSSASLAHFKCSRCTFVPMCWDI*GTSTKS
Trigger: GGACTTCGTGCTCGTTCCTCAGATGTCCCAGCACAT...AGGCACAAATGTGCACCTGGAGCATTTGAAATGTGCTAGTGAGGCTGAGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR TCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCAATGTGCTGGGACATCTaGGGAACGAGCACGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSMCWDI*GTSTKS
Trigger: GGACTTCGTGCTCGTTCCTCAGATGTCCCAGCACAT...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCACCCAGCTCCACAAAATaGAGACGGACCCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPPSSTK*RRTLGF
Trigger: AAAGCCCAGGGTCCGTCTGCATTTTGTGGAGCTGGG...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380476.7
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCATGTACCACACCAGCATaGCACCCCAGTCATGGCCAA +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSCTTPA*HPSHGQ
Trigger: TTGGCCATGACTGGGGTGGCATGCTGGTGTGGTACA...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCATGTACCACACCAGCATaGCACCCCAGTCATGGCCAA +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPCTTPA*HPSHGQ
Trigger: TTGGCCATGACTGGGGTGGCATGCTGGTGTGGTACA...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp TGCATTCTCCGTGAACAGTCACTCCACCTCTCCAAGAACAAAGACAGCCAGCAGTCCATCTGTGTCCAGTaGCCACAGTCCTCAATGTGT +
Preference number: 4 (lower is better)
Translates to: CILREQSLHLSKNKDSQQSICVQ*PQSSMC
Trigger: ACACATTGAGGACTGTGGGCACTGGACACAGATGGA...CTGCTGGCTGTCTTTGTTCTTGGAGAGGTGGAGTGACTGTTCACGGAGAATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR GCA 90 bp AAAGGGTTCATCCCCATGCCGTGCATTCTCCGTGAACAGTCACTCCACCTCTCCCAGATAAAGGGACGATaGATTCATGCCTGGAGAACT +
Preference number: 4 (lower is better)
Translates to: KGFIPMPCILREQSLHLSQIKGR*IHAWRT
Trigger: AGTTCTCCAGGCATGAATGCATCGTCCCTTTATCTG...GGAGAGGTGGAGTGACTGTTCACGGAGAATGCACGGCATGGGGATGAACCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR GCA 90 bp TCTTCCTCAGCCTCACTAGCACATTTCAAATGCTCCAGGTGCACATTTGTGCCTCAGGGGAGAGACCACTaGAGGAGACACATCAGTGAG +
Preference number: 4 (lower is better)
Translates to: SSSASLAHFKCSRCTFVPQGRDH*RRHISE
Trigger: CTCACTGATGTGTCTCCTGCAGTGGTCTCTCCCCTG...AGGCACAAATGTGCACCTGGAGCATTTGAAATGTGCTAGTGAGGCTGAGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGATGAGTGGTATCCACTaGGAAAGTGTGATCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLMSGIH*ESVISP
Trigger: AGGAGAGATCACACTTTCCCAGTGGATACCACTCAT...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
CDS-3UTR CCA 90 bp GGATTGTCTCCTGGCCAGCACGGCCTAGATCATACAGCACCTTGGAGCCCAGAAGTTTTCTTCCATGAGTaGTATCCACTGGGAAAGTGT +
Preference number: 4 (lower is better)
Translates to: GLSPGQHGLDHTAPWSPEVFFHE*YPLGKC
Trigger: ACACTTTCCCAGTGGATACCACTCATGGAAGAAAAC...TTCTGGGCTCCAAGGTGCTGTATGATCTAGGCCGTGCTGGCCAGGAGACAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CCA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACAGCATGAGAGCTGCCTaGAGCATGGGGCGGTTGATC +
Preference number: 4 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYSMRAA*SMGRLI
Trigger: GATCAACCGCCCCATGCTCCAGGCAGCTCTCATGCT...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCATCCCAAGTCACGGGCTaGCTTCAGATTAGCCCCGAT +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSSQVTG*LQISPD
Trigger: ATCGGGGCTAATCTGAAGCCAGCCCGTGACTTGGGA...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCAGCCGTGTCAGTGTCCTaGACCAGGATGGTGACCATT +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPAVSVS*TRMVTI
Trigger: AATGGTCACCATCCTGGTCCAGGACACTGACACGGC...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCAGCCGTGTCAGTGTCCTaGACCAGGATGGTGACCATT +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSAVSVS*TRMVTI
Trigger: AATGGTCACCATCCTGGTCCAGGACACTGACACGGC...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CCCATGCCGTGCATTCTCCGTGAACAGTCACTCCACCTCTCCAAGAACAAAGACGAGGCTGGGCTCTTCTaGGCTATTTACAAAAAGTCC +
Preference number: 4 (lower is better)
Translates to: PMPCILREQSLHLSKNKDEAGLF*AIYKKS
Trigger: GGACTTTTTGTAAATAGCCCAGAAGAGCCCAGCCTC...GTCTTTGTTCTTGGAGAGGTGGAGTGACTGTTCACGGAGAATGCACGGCATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCAAGAGAAATCACCACCTaGCCACCCCATTCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPREITT*PPHSVP
Trigger: GGGGACAGAATGGGGTGGCCAGGTGGTGATTTCTCT...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACGGTAGTGGCACCCTCTaGTCCCCCTTTCTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYGSGTL*SPFLES
Trigger: GCTTTCCAGAAAGGGGGACCAGAGGGTGCCACTACC...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
CDS-3UTR TCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGGAGCATGGGGCGGTTaGTCTTTCTGGCTGAAATCG +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGGAWGG*SFWLKS
Trigger: CGATTTCAGCCAGAAAGATCAACCGCCCCATGCTCC...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACGGAGCATGGGGCGGTTaGTCTTTCTGGCTGAAATCG +
Preference number: 4 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYGAWGG*SFWLKS
Trigger: CGATTTCAGCCAGAAAGATCAACCGCCCCATGCTCC...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCATCTGAGGTTCAGGTTTaGCCATTCCCACCTGACACG +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSSEVQV*PFPPDT
Trigger: CGTGTCAGGTGGGAATGGTCAAACCTGAACCTCAGA...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACCCCAGTCATGGCCAATaGACACTGCTTGAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYPSHGQ*TLLERG
Trigger: GCCTCTCTCAAGCAGTGTTCATTGGCCATGACTGGG...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACATGTGCTGGGACATCTaGGGAACGAGCACGAAGTCC +
Preference number: 4 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYMCWDI*GTSTKS
Trigger: GGACTTCGTGCTCGTTCCTCAGATGTCCCAGCACAT...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTTGCGTTCTACATCTTTaGGACCACCGGTGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGCVLHL*DHRWVP
Trigger: CGGAACCCACCGGTGGTCTCAAAGATGTAGAACGCA...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTGCGTTCTACATCTTTaGGACCACCGGTGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYCVLHL*DHRWVP
Trigger: CGGAACCCACCGGTGGTCTCAAAGATGTAGAACGCA...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTCAGGAGACACATCAGTaGGATGGGAGCCTAACCGGA +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGQETHQ*DGSLTG
Trigger: TCCGGTTAGGCTCCCATCTCACTGATGTGTCTCCTG...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR GCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGATCAGGAAGTCAAAGTaGATCTTCAGCTCACACATC +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLIRKSK*IFSSHI
Trigger: GATGTGTGAGCTGAAGATGCACTTTGACTTCCTGAT...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCATCATGTCACTTGGATTaGAAGAGGTCGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSSCHLD*KRSAEG
Trigger: CCCCTCTGCCGACCTCTTGCAATCCAAGTGACATGA...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACCCCAGCTCCACAAAATaGAGACGGACCCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYPSSTK*RRTLGF
Trigger: AAAGCCCAGGGTCCGTCTGCATTTTGTGGAGCTGGG...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380476.7
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGGGACATGTTGGGATTTaGTGGTATGAAGGGAGTATT +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLGHVGI*WYEGSI
Trigger: AATACTCCCTTCATACCAGCAAATCCCAACATGTCC...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGAACACTCTCATCGCTTaGTCTGAAGAGGCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLNTLIA*SEEAFE
Trigger: TTCAAAAGCCTCTTCAGAGCAAGCGATGAGAGTGTT...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp TCTTCCTCAGCCTCACTAGCACATTTCAAATGCTCCAGGTGCACATTTGTGCCTAAGATGAGCTGGATCTaGCTGAGCCTCATGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SSSASLAHFKCSRCTFVPKMSWI*LSLMAA
Trigger: AGCTGCCATGAGGCTCAGGCAGATCCAGCTCATCTT...AGGCACAAATGTGCACCTGGAGCATTTGAAATGTGCTAGTGAGGCTGAGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CCA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTCCCAAGTCACGGGCTaGCTTCAGATTAGCCCCGAT +
Preference number: 4 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYSQVTG*LQISPD
Trigger: ATCGGGGCTAATCTGAAGCCAGCCCGTGACTTGGGA...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTTCCCAAGTCACGGGCTaGCTTCAGATTAGCCCCGAT +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGSQVTG*LQISPD
Trigger: ATCGGGGCTAATCTGAAGCCAGCCCGTGACTTGGGA...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCAAGGGAGTATTCAAACTaGCCACCGCCCTCACTCTCT +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSREYSN*PPPSLS
Trigger: AGAGAGTGAGGGCGGTGGCCAGTTTGAATACTCCCT...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCAAGCCTCAGCCACTCCTaGTTCTTGGAAGTAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSSLSHS*FLEVEL
Trigger: CAGCTCTACTTCCAAGAACCAGGAGTGGCTGAGGCT...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACAGAGAAATCACCACCTaGCCACCCCATTCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYREITT*PPHSVP
Trigger: GGGGACAGAATGGGGTGGCCAGGTGGTGATTTCTCT...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTAGACGGACCCTGGGCTaGGAAAGTGTGATCTCTCCT +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGRRTLG*ESVISP
Trigger: AGGAGAGATCACACTTTCCCAGCCCAGGGTCCGTCT...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517536.5
CDS-3UTR TCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCATTGACCATTCCCACCTaGCACGACTCTATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSLTIPT*HDSIRK
Trigger: CTTCCTGATAGAGTCGTGTCAGGTGGGAATGGTCAA...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCATTGACCATTCCCACCTaGCACGACTCTATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPLTIPT*HDSIRK
Trigger: CTTCCTGATAGAGTCGTGTCAGGTGGGAATGGTCAA...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTCTGAGGTTCAGGTTTaGCCATTCCCACCTGACACG +
Preference number: 4 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYSEVQV*PFPPDT
Trigger: CGTGTCAGGTGGGAATGGTCAAACCTGAACCTCAGA...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCATTCGGGAGGAGCAGATaGCTCTCCATAGCCTTTCAT +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPFGRSR*LSIAFH
Trigger: ATGAAAGGCTATGGAGAGTCATCTGCTCCTCCCGAA...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCAGTGCACATTTGTGCCTaGGCAAACTCTGCTAGGGAA +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPVHICA*ANSARE
Trigger: TTCCCTAGCAGAGTTTGCTCAGGCACAAATGTGCAC...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR GCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTTCATGTCACTTGGATTaGAAGAGGTCGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGSCHLD*KRSAEG
Trigger: CCCCTCTGCCGACCTCTTGCAATCCAAGTGACATGA...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCATCCATCTGTGTCCAGTaGCCACAGTCCTCAATGTGT +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSSICVQ*PQSSMC
Trigger: ACACATTGAGGACTGTGGGCACTGGACACAGATGGA...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCAAGCACAAGACACCACTaGCATCCCCATAGGATTGTC +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSSTRHH*HPHRIV
Trigger: GACAATCCTATGGGGATGGCAGTGGTGTCTTGTGCT...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CCA 90 bp TGCATTCTCCGTGAACAGTCACTCCACCTCTCCAAGAACAAAGACAGCCAGCAGATGAGTGGTATCCACTaGGAAAGTGTGATCTCTCCT +
Preference number: 4 (lower is better)
Translates to: CILREQSLHLSKNKDSQQMSGIH*ESVISP
Trigger: AGGAGAGATCACACTTTCCCAGTGGATACCACTCAT...CTGCTGGCTGTCTTTGTTCTTGGAGAGGTGGAGTGACTGTTCACGGAGAATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCAGGGGTATTGAGAAGCTaGATTCCGGTCACTTTCTCC +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPGVLRS*IPVTFS
Trigger: GGAGAAAGTGACCGGAATCCAGCTTCTCAATACCCC...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCAGGGGTATTGAGAAGCTaGATTCCGGTCACTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSGVLRS*IPVTFS
Trigger: GGAGAAAGTGACCGGAATCCAGCTTCTCAATACCCC...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCAATGGCTCATGTCACTTaGATTGCAAGAGGTCGGCAG +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPMAHVT*IARGRQ
Trigger: CTGCCGACCTCTTGCAATCCAAGTGACATGAGCCAT...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCAGCCAGAGCAGGGATCTaGTACCTCCAAGAATACCAA +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPARAGI*YLQEYQ
Trigger: TTGGTATTCTTGGAGGTACCAGATCCCTGCTCTGGC...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCAGCCAGAGCAGGGATCTaGTACCTCCAAGAATACCAA +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSARAGI*YLQEYQ
Trigger: TTGGTATTCTTGGAGGTACCAGATCCCTGCTCTGGC...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTAGGGAGTATTCAAACTaGCCACCGCCCTCACTCTCT +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGREYSN*PPPSLS
Trigger: AGAGAGTGAGGGCGGTGGCCAGTTTGAATACTCCCT...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTAGCCTCAGCCACTCCTaGTTCTTGGAAGTAGAGCTG +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGSLSHS*FLEVEL
Trigger: CAGCTCTACTTCCAAGAACCAGGAGTGGCTGAGGCT...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGCACAGACTTTATGCATaGATAAAACACTCTCATCGC +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLHRLYA*IKHSHR
Trigger: GCGATGAGAGTGTTTTATCCATGCATAAAGTCTGTG...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTGTCCCCTTTTCAGGTaGGGAATCCAGTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYCPLFR*GIQSSM
Trigger: CATGGAGGACTGGATTCCCCACCTGAAAAGGGGACA...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGTTTTCTTCCATGAGTaGTATCCACTGGGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGVFFHE*YPLGSA
Trigger: GGCGCTGCCCAGTGGATACCACTCATGGAAGAAAAC...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521780.5
CDS-3UTR TCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTTTGACCATTCCCACCTaGCACGACTCTATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGLTIPT*HDSIRK
Trigger: CTTCCTGATAGAGTCGTGTCAGGTGGGAATGGTCAA...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTTGACCATTCCCACCTaGCACGACTCTATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYLTIPT*HDSIRK
Trigger: CTTCCTGATAGAGTCGTGTCAGGTGGGAATGGTCAA...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTTCGGGAGGAGCAGATaGCTCTCCATAGCCTTTCAT +
Preference number: 4 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYFGRSR*LSIAFH
Trigger: ATGAAAGGCTATGGAGAGTCATCTGCTCCTCCCGAA...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCAATACTGGGTTGGCTTTaGTACTCTCCAAAGGGGACA +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSILGWL*YSPKGT
Trigger: TGTCCCCTTTGGAGAGTATCAAAGCCAACCCAGTAT...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCAATACTGGGTTGGCTTTaGTACTCTCCAAAGGGGACA +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPILGWL*YSPKGT
Trigger: TGTCCCCTTTGGAGAGTATCAAAGCCAACCCAGTAT...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCACACTTAATGAGGATCTaGTTCACCTCGGTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPHLMRI*FTSVGL
Trigger: CAAGCCAACCGAGGTGAATCAGATCCTCATTAAGTG...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGAGAACTAATCACACCTaGTTTCTCTGGGATCTAAAA +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLRTNHT*FLWDLK
Trigger: TTTTAGATCCCAGAGAAATCAGGTGTGATTAGTTCT...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGGCTTCACAGACTTTATaGATGGATAAAACACTCTCA +
Preference number: 4 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLASQTL*MDKTLS
Trigger: TGAGAGTGTTTTATCCATGCATAAAGTCTGTGAAGC...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTTCCATCTGTGTCCAGTaGCCACAGTCCTCAATGTGT +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGSICVQ*PQSSMC
Trigger: ACACATTGAGGACTGTGGGCACTGGACACAGATGGA...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCACAATGCTGCCATCCATaGAAGATGTGTGTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPQCCHP*KMCVRP
Trigger: TGGCCTTACACACATCTTGCATGGATGGCAGCATTG...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCAACCCCTTCAGAACAATaGTGCCATCCATGCAAGATG +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPTPSEQ*CHPCKM
Trigger: CATCTTGCATGGATGGCAGCATTGTTCTGAAGGGGT...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp AAAGGGTTCATCCCCATGCCGTGCATTCTCCGTGAACAGTCACTCCACCTCTCCCAAAGATTTCTTTTATaGAGAAATTCTTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: KGFIPMPCILREQSLHLSQRFLL*RNSWGG
Trigger: GCCTCCCCAAGAATTTCTCCATAAAAGAAATCTTTG...GGAGAGGTGGAGTGACTGTTCACGGAGAATGCACGGCATGGGGATGAACCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTATGGCTCATGTCACTTaGATTGCAAGAGGTCGGCAG +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGMAHVT*IARGRQ
Trigger: CTGCCGACCTCTTGCAATCCAAGTGACATGAGCCAT...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCAACTGTCACGTACCCATaGCTCATGTCACTTGGATTG +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPTVTYP*LMSLGL
Trigger: CAATCCAAGTGACATGAGCCATGGGTACGTGACAGT...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp TCTTCCTCAGCCTCACTAGCACATTTCAAATGCTCCAGGTGCACATTTGTGCCTACTGTCACGTACCCATaGCTCATGTCACTTGGATTG +
Preference number: 4 (lower is better)
Translates to: SSSASLAHFKCSRCTFVPTVTYP*LMSLGL
Trigger: CAATCCAAGTGACATGAGCCATGGGTACGTGACAGT...AGGCACAAATGTGCACCTGGAGCATTTGAAATGTGCTAGTGAGGCTGAGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CCA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACGCCAGAGCAGGGATCTaGTACCTCCAAGAATACCAA +
Preference number: 4 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYARAGI*YLQEYQ
Trigger: TTGGTATTCTTGGAGGTACCAGATCCCTGCTCTGGC...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCAGAGGCTGGGCTCTTCTaGGCTATTTACAAAAAGTCC +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPEAGLF*AIYKKS
Trigger: GGACTTTTTGTAAATAGCCCAGAAGAGCCCAGCCTC...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCATGCAGTTTTCTTCCATaGGTGGTATCCACTGGGAAA +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSCSFLP*VVSTGK
Trigger: TTTCCCAGTGGATACCACTCATGGAAGAAAACTGCA...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
CDS-3UTR TCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCATGGGATTTGCTGGTATaGAGGGAGTATTCAAACTGG +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPWDLLV*REYSNW
Trigger: CCAGTTTGAATACTCCCTTCATACCAGCAAATCCCA...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCATGGGATTTGCTGGTATaGAGGGAGTATTCAAACTGG +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSWDLLV*REYSNW
Trigger: CCAGTTTGAATACTCCCTTCATACCAGCAAATCCCA...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACATACTGGGTTGGCTTTaGTACTCTCCAAAGGGGACA +
Preference number: 4 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYILGWL*YSPKGT
Trigger: TGTCCCCTTTGGAGAGTATCAAAGCCAACCCAGTAT...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTATACTGGGTTGGCTTTaGTACTCTCCAAAGGGGACA +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGILGWL*YSPKGT
Trigger: TGTCCCCTTTGGAGAGTATCAAAGCCAACCCAGTAT...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACCACTTAATGAGGATCTaGTTCACCTCGGTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYHLMRI*FTSVGL
Trigger: CAAGCCAACCGAGGTGAATCAGATCCTCATTAAGTG...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTCACTTAATGAGGATCTaGTTCACCTCGGTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGHLMRI*FTSVGL
Trigger: CAAGCCAACCGAGGTGAATCAGATCCTCATTAAGTG...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTATGGCCAATGAACACTaGTTGAGAGAGGCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGMANEH*LREAQF
Trigger: AAACTGGGCCTCTCTCAAGCAGTGTTCATTGGCCAT...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTCAATGCTGCCATCCATaGAAGATGTGTGTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGQCCHP*KMCVRP
Trigger: TGGCCTTACACACATCTTGCATGGATGGCAGCATTG...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACCAATGCTGCCATCCATaGAAGATGTGTGTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYQCCHP*KMCVRP
Trigger: TGGCCTTACACACATCTTGCATGGATGGCAGCATTG...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTACCCCTTCAGAACAATaGTGCCATCCATGCAAGATG +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGTPSEQ*CHPCKM
Trigger: CATCTTGCATGGATGGCAGCATTGTTCTGAAGGGGT...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCACAGATAAAGGGACGATaGATTCATGCCTGGAGAACT +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSQIKGR*IHAWRT
Trigger: AGTTCTCCAGGCATGAATGCATCGTCCCTTTATCTG...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp TCTTCCTCAGCCTCACTAGCACATTTCAAATGCTCCAGGTGCACATTTGTGCCTTTCAAATGCTCCAGGTaGACATTTGTGCCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: SSSASLAHFKCSRCTFVPFKCSR*TFVPEQ
Trigger: TTGCTCAGGCACAAATGTGCACCTGGAGCATTTGAA...AGGCACAAATGTGCACCTGGAGCATTTGAAATGTGCTAGTGAGGCTGAGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CCA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACACTGTCACGTACCCATaGCTCATGTCACTTGGATTG +
Preference number: 4 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYTVTYP*LMSLGL
Trigger: CAATCCAAGTGACATGAGCCATGGGTACGTGACAGT...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTACTGTCACGTACCCATaGCTCATGTCACTTGGATTG +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGTVTYP*LMSLGL
Trigger: CAATCCAAGTGACATGAGCCATGGGTACGTGACAGT...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp TGCATTCTCCGTGAACAGTCACTCCACCTCTCCAAGAACAAAGACAGCCAGCAGCATGTTGGGATTTGCTaGTATGAAGGGAGTATTCAA +
Preference number: 4 (lower is better)
Translates to: CILREQSLHLSKNKDSQQHVGIC*YEGSIQ
Trigger: TTGAATACTCCCTTCATACCAGCAAATCCCAACATG...CTGCTGGCTGTCTTTGTTCTTGGAGAGGTGGAGTGACTGTTCACGGAGAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGAGGCTGGGCTCTTCTaGGCTATTTACAAAAAGTCC +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGEAGLF*AIYKKS
Trigger: GGACTTTTTGTAAATAGCCCAGAAGAGCCCAGCCTC...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACGAGGCTGGGCTCTTCTaGGCTATTTACAAAAAGTCC +
Preference number: 4 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYEAGLF*AIYKKS
Trigger: GGACTTTTTGTAAATAGCCCAGAAGAGCCCAGCCTC...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTGCAGTTTTCTTCCATaGGTGGTATCCACTGGGAAA +
Preference number: 4 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYCSFLP*VVSTGK
Trigger: TTTCCCAGTGGATACCACTCATGGAAGAAAACTGCA...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
CDS-3UTR TCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCAGTTGATCTTTCTGGCTaGAATCGCCTTGTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSVDLSG*NRLVKD
Trigger: ATCTTTGACAAGGCGATTTCAGCCAGAAAGATCAAC...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTTGGGATTTGCTGGTATaGAGGGAGTATTCAAACTGG +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGWDLLV*REYSNW
Trigger: CCAGTTTGAATACTCCCTTCATACCAGCAAATCCCA...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCAGGACATGTTGGGATTTaGTGGTATGAAGGGAGTATT +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPGHVGI*WYEGSI
Trigger: AATACTCCCTTCATACCAGCAAATCCCAACATGTCC...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCAGGACATGTTGGGATTTaGTGGTATGAAGGGAGTATT +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSGHVGI*WYEGSI
Trigger: AATACTCCCTTCATACCAGCAAATCCCAACATGTCC...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCAAACACTCTCATCGCTTaGTCTGAAGAGGCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSNTLIA*SEEAFE
Trigger: TTCAAAAGCCTCTTCAGAGCAAGCGATGAGAGTGTT...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCAAACACTCTCATCGCTTaGTCTGAAGAGGCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPNTLIA*SEEAFE
Trigger: TTCAAAAGCCTCTTCAGAGCAAGCGATGAGAGTGTT...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp TCTTCCTCAGCCTCACTAGCACATTTCAAATGCTCCAGGTGCACATTTGTGCCTAACACTCTCATCGCTTaGTCTGAAGAGGCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: SSSASLAHFKCSRCTFVPNTLIA*SEEAFE
Trigger: TTCAAAAGCCTCTTCAGAGCAAGCGATGAGAGTGTT...AGGCACAAATGTGCACCTGGAGCATTTGAAATGTGCTAGTGAGGCTGAGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR GCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTCAGATAAAGGGACGATaGATTCATGCCTGGAGAACT +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGQIKGR*IHAWRT
Trigger: AGTTCTCCAGGCATGAATGCATCGTCCCTTTATCTG...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCAGTTTTCTTCCATGAGTaGTATCCACTGGGAAAGTGT +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSVFFHE*YPLGKC
Trigger: ACACTTTCCCAGTGGATACCACTCATGGAAGAAAAC...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
CDS-3UTR TCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGTTGATCTTTCTGGCTaGAATCGCCTTGTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGVDLSG*NRLVKD
Trigger: ATCTTTGACAAGGCGATTTCAGCCAGAAAGATCAAC...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTATCAGGAAGTCAAAGTaGATCTTCAGCTCACACATC +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGIRKSK*IFSSHI
Trigger: GATGTGTGAGCTGAAGATGCACTTTGACTTCCTGAT...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGGACATGTTGGGATTTaGTGGTATGAAGGGAGTATT +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGGHVGI*WYEGSI
Trigger: AATACTCCCTTCATACCAGCAAATCCCAACATGTCC...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGTTTTCTTCCATGAGTaGTATCCACTGGGAAAGTGT +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGVFFHE*YPLGKC
Trigger: ACACTTTCCCAGTGGATACCACTCATGGAAGAAAAC...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
CDS-3UTR CCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCACATGTTGGGATTTGCTaGTATGAAGGGAGTATTCAA +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSHVGIC*YEGSIQ
Trigger: TTGAATACTCCCTTCATACCAGCAAATCCCAACATG...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCACACAGACTTTATGCATaGATAAAACACTCTCATCGC +
Preference number: 4 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSHRLYA*IKHSHR
Trigger: GCGATGAGAGTGTTTTATCCATGCATAAAGTCTGTG...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
3UTR CAA 72 bp CTAAATGAACGGCTGATTTTTCTGCCAAACTATGCATaGGTCAAAGAGAAATCACCACCTGGCCACCCCATT +
Preference number: 4 (lower is better)
Translates to: LNERLIFLPNYA*VKEKSPPGHPI
Trigger: AATGGGGTGGCCAGGTGGTGATTTCTCTTTGACCAATGCATAGTTTGGCAGAAAAATCAGCCGTTCATTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCAAGAACTAATCACACCTaGTTTCTCTGGGATCTAAAA +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPRTNHT*FLWDLK
Trigger: TTTTAGATCCCAGAGAAATCAGGTGTGATTAGTTCT...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCAGCTTCACAGACTTTATaGATGGATAAAACACTCTCA +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPASQTL*MDKTLS
Trigger: TGAGAGTGTTTTATCCATGCATAAAGTCTGTGAAGC...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCACAAAGATTTCTTTTATaGAGAAATTCTTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPQRFLL*RNSWGG
Trigger: GCCTCCCCAAGAATTTCTCCATAAAAGAAATCTTTG...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACCATGTTGGGATTTGCTaGTATGAAGGGAGTATTCAA +
Preference number: 4 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYHVGIC*YEGSIQ
Trigger: TTGAATACTCCCTTCATACCAGCAAATCCCAACATG...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTCATGTTGGGATTTGCTaGTATGAAGGGAGTATTCAA +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGHVGIC*YEGSIQ
Trigger: TTGAATACTCCCTTCATACCAGCAAATCCCAACATG...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTCACAGACTTTATGCATaGATAAAACACTCTCATCGC +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGHRLYA*IKHSHR
Trigger: GCGATGAGAGTGTTTTATCCATGCATAAAGTCTGTG...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR TCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTAGAACTAATCACACCTaGTTTCTCTGGGATCTAAAA +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGRTNHT*FLWDLK
Trigger: TTTTAGATCCCAGAGAAATCAGGTGTGATTAGTTCT...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCTTCACAGACTTTATaGATGGATAAAACACTCTCA +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGASQTL*MDKTLS
Trigger: TGAGAGTGTTTTATCCATGCATAAAGTCTGTGAAGC...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCATTTTCTGCCAAACTATaGATTGGTCAAAGAGAAATC +
Preference number: 4 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPFSAKL*IGQREI
Trigger: GATTTCTCTTTGACCAATGCATAGTTTGGCAGAAAA...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTCAAAGATTTCTTTTATaGAGAAATTCTTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGQRFLL*RNSWGG
Trigger: GCCTCCCCAAGAATTTCTCCATAAAAGAAATCTTTG...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
3UTR CAA 72 bp ACAAAGACAGCCAGCAGCATAGTCATCTTAGCTTTATaGAGTAAGGCATCCCAATCTCTGCTAAGATTCTTC +
Preference number: 4 (lower is better)
Translates to: TKTASSIVILAL*SKASQSLLRFF
Trigger: GAAGAATCTTAGCAGAGATTGGGATGCCTTACTCAATAAAGCTAAGATGACTATGCTGCTGGCTGTCTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR GCA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTTTTTCTGCCAAACTATaGATTGGTCAAAGAGAAATC +
Preference number: 4 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGFSAKL*IGQREI
Trigger: GATTTCTCTTTGACCAATGCATAGTTTGGCAGAAAA...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR GCA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTTTTCTGCCAAACTATaGATTGGTCAAAGAGAAATC +
Preference number: 4 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYFSAKL*IGQREI
Trigger: GATTTCTCTTTGACCAATGCATAGTTTGGCAGAAAA...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS CCA 90 bp CAGCGCCAGGGCCTCCTCCGTGCGGCCGAGGACGCCGAACACCGCTaGCAGCGCCAGCACCCCGTCAAGGTCGAAGACGGCCGCGCGCAG +
Preference number: 5 (lower is better)
Translates to: QRQGLLRAAEDAEHR*QRQHPVKVEDGRAQ
Trigger: CTGCGCGCGGCCGTCTTCGACCTTGACGGGGTGCTGGCGCTGCCAGCGGTGTTCGGCGTCCTCGGCCGCACGGAGGAGGCCCTGGCGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518328.5
ENST00000518379.5
ENST00000520623.5
ENST00000520666.1
ENST00000521400.6
ENST00000521684.1
ENST00000521780.5
CDS GCA 90 bp AAGCCGGGTAGTGGCACCCTCTGGGCAGCGCCAGGGCCTCCTCCGTaGGGCCGAGGACGCCGAACACCGCTGGCAGCGCCAGCACCCCGT +
Preference number: 5 (lower is better)
Translates to: KPGSGTLWAAPGPPP*GRGRRTPLAAPAPR
Trigger: ACGGGGTGCTGGCGCTGCCAGCGGTGTTCGGCGTCCTCGGCCGCACGGAGGAGGCCCTGGCGCTGCCCAGAGGGTGCCACTACCCGGCTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380476.7
CDS GCA 90 bp CGTCAAGGTCGAAGACGGCCGCGCGCAGCGTCATGGCGGCGGGTCTaGAGCCTAGCACCCGGACACGCAGCTAACCCAGGCCCGGGCCTT +
Preference number: 5 (lower is better)
Translates to: RQGRRRPRAASWRRV*SLAPGHAANPGPGL
Trigger: AAGGCCCGGGCCTGGGTTAGCTGCGTGTCCGGGTGCTAGGCTGCAGACCCGCCGCCATGACGCTGCGCGCGGCCGTCTTCGACCTTGACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518328.5
CDS CCA 90 bp GCGCCAGCACCCCGTCAAGGTCGAAGACGGCCGCGCGCAGCGTCATaGCGGCGGGTCTGCAGCCTAGCACCCGGACACGCAGCTAACCCA +
Preference number: 5 (lower is better)
Translates to: APAPRQGRRRPRAAS*RRVCSLAPGHAANP
Trigger: TGGGTTAGCTGCGTGTCCGGGTGCTAGGCTGCAGACCCGCCGCCATGACGCTGCGCGCGGCCGTCTTCGACCTTGACGGGGTGCTGGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518328.5
CDS CCA 90 bp GCGCCAGCACCCCGTCAAGGTCGAAGACGGCCGCGCGCAGCGTCATaGCGGCGGGTCTGCAGCCTAGCACCCGGACACGCAGCTAACCTG +
Preference number: 5 (lower is better)
Translates to: APAPRQGRRRPRAAS*RRVCSLAPGHAANL
Trigger: CAGGTTAGCTGCGTGTCCGGGTGCTAGGCTGCAGACCCGCCGCCATGACGCTGCGCGCGGCCGTCTTCGACCTTGACGGGGTGCTGGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517536.5
ENST00000520623.5
ENST00000521400.6
ENST00000521780.5
CDS GCA 90 bp TCTTCCATGAGTGGTATCCACTGGGCAGCGCCAGGGCCTCCTCCGTaGGGCCGAGGACGCCGAACACCGCTGGCAGCGCCAGCACCCCGT +
Preference number: 5 (lower is better)
Translates to: SSMSGIHWAAPGPPP*GRGRRTPLAAPAPR
Trigger: ACGGGGTGCTGGCGCTGCCAGCGGTGTTCGGCGTCCTCGGCCGCACGGAGGAGGCCCTGGCGCTGCCCAGTGGATACCACTCATGGAAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521780.5
CDS GCA 90 bp AAGCATCATTCAGAAGTCCTCTGGGCAGCGCCAGGGCCTCCTCCGTaGGGCCGAGGACGCCGAACACCGCTGGCAGCGCCAGCACCCCGT +
Preference number: 5 (lower is better)
Translates to: KHHSEVLWAAPGPPP*GRGRRTPLAAPAPR
Trigger: ACGGGGTGCTGGCGCTGCCAGCGGTGTTCGGCGTCCTCGGCCGCACGGAGGAGGCCCTGGCGCTGCCCAGAGGACTTCTGAATGATGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000517536.5
ENST00000518328.5
ENST00000518379.5
ENST00000520623.5
ENST00000521400.6
ENST00000521684.1
CDS GCA 90 bp CGTCAAGGTCGAAGACGGCCGCGCGCAGCGTCATGGCGGCGGGTCTaGAGCCTAGCACCCGGACACGCAGCTAACCTGGGAGATGCGCGA +
Preference number: 5 (lower is better)
Translates to: RQGRRRPRAASWRRV*SLAPGHAANLGDAR
Trigger: TCGCGCATCTCCCAGGTTAGCTGCGTGTCCGGGTGCTAGGCTGCAGACCCGCCGCCATGACGCTGCGCGCGGCCGTCTTCGACCTTGACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000517536.5
ENST00000520623.5
ENST00000521400.6
ENST00000521780.5
CDS GCA 90 bp GAAAGCATCATTCAGAAGTCCTGGGCAGCGCCAGGGCCTCCTCCGTaGGGCCGAGGACGCCGAACACCGCTGGCAGCGCCAGCACCCCGT +
Preference number: 5 (lower is better)
Translates to: ESIIQKSWAAPGPPP*GRGRRTPLAAPAPR
Trigger: ACGGGGTGCTGGCGCTGCCAGCGGTGTTCGGCGTCCTCGGCCGCACGGAGGAGGCCCTGGCGCTGCCCAGGACTTCTGAATGATGCTTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520666.1
CDS CCA 90 bp GAGACAAGGATGAGCTCCAGGTGGGGGAATTGGAAACATGGCGCCTaGATGGAGAGGGGCCAGTGGACTGCAATGGAGGAGACCTGGGCA +
Preference number: 5 (lower is better)
Translates to: ETRMSSRWGNWKHGA*MERGQWTAMEETWA
Trigger: TGCCCAGGTCTCCTCCATTGCAGTCCACTGGCCCCTCTCCATCCAGGCGCCATGTTTCCAATTCCCCCACCTGGAGCTCATCCTTGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520623.5
CDS CCA 90 bp CAGGAGGGAGACAAGGATGAGCTCCAGGTGGGGGAATTGGAAACATaGCGCCTGGATGGAGAGGGGCCAGTGGACTGCAATGGAGGAGAC +
Preference number: 5 (lower is better)
Translates to: QEGDKDELQVGELET*RLDGEGPVDCNGGD
Trigger: GTCTCCTCCATTGCAGTCCACTGGCCCCTCTCCATCCAGGCGCCATGTTTCCAATTCCCCCACCTGGAGCTCATCCTTGTCTCCCTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520623.5
CDS CCA 90 bp ACCCAACCCAGGAGGGAGACAAGGATGAGCTCCAGGTGGGGGAATTaGAAACATGGCGCCTGGATGGAGAGGGGCCAGTGGACTGCAATG +
Preference number: 5 (lower is better)
Translates to: TQPRRETRMSSRWGN*KHGAWMERGQWTAM
Trigger: CATTGCAGTCCACTGGCCCCTCTCCATCCAGGCGCCATGTTTCCAATTCCCCCACCTGGAGCTCATCCTTGTCTCCCTCCTGGGTTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520623.5
CDS CCA 90 bp TCTCCTTTCATAAGCCGGGTAGTGGCACCCTCTGGTCCCCCTTTCTaGAAAGCATCATTCAGAAGTCCTCTGGGCAGCGCCAGGGCCTCC +
Preference number: 5 (lower is better)
Translates to: SPFISRVVAPSGPPF*KASFRSPLGSARAS
Trigger: GGAGGCCCTGGCGCTGCCCAGAGGACTTCTGAATGATGCTTTCCAGAAAGGGGGACCAGAGGGTGCCACTACCCGGCTTATGAAAGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000517536.5
ENST00000518328.5
ENST00000518379.5
ENST00000520623.5
ENST00000521400.6
ENST00000521684.1
CDS CCA 90 bp TTCACTCATACCCAACCCAGGAGGGAGACAAGGATGAGCTCCAGGTaGGGGAATTGGAAACATGGCGCCTGGATGGAGAGGGGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: FTHTQPRRETRMSSR*GNWKHGAWMERGQW
Trigger: CCACTGGCCCCTCTCCATCCAGGCGCCATGTTTCCAATTCCCCCACCTGGAGCTCATCCTTGTCTCCCTCCTGGGTTGGGTATGAGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520623.5
CDS CCA 90 bp TCTCCTTTCATAAGCCGGGTAGTGGCACCCTCTGGTCCCCCTTTCTaGAAAGCATCATTCAGAAGTCCTGGGCAGCGCCAGGGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: SPFISRVVAPSGPPF*KASFRSPGQRQGLL
Trigger: GAGGAGGCCCTGGCGCTGCCCAGGACTTCTGAATGATGCTTTCCAGAAAGGGGGACCAGAGGGTGCCACTACCCGGCTTATGAAAGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520666.1
CDS-3UTR CAA 90 bp GGCGGCAAGACCCGTGAGGAGGCTGCTGCTCCAGGACTCTGGGGCTGGAAGCAGTTTATGGAGAAATTCTaGGGGAGGCAGACTTTAGCG +
Preference number: 5 (lower is better)
Translates to: GGKTREEAAAPGLWGWKQFMEKF*GRQTLA
Trigger: CGCTAAAGTCTGCCTCCCCAAGAATTTCTCCATAAA...CTGCTTCCAGCCCCAGAGTCCTGGAGCAGCAGCCTCCTCACGGGTCTTGCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CAA 90 bp AAAGGGTTCATCCCCATGCCGTGCATTCTCCGTGAACAGTCACTCCACCTCTCCGCCATCCCCATAGGATaGTCTCCTGGCCAGCACGGC +
Preference number: 5 (lower is better)
Translates to: KGFIPMPCILREQSLHLSAIPIG*SPGQHG
Trigger: GCCGTGCTGGCCAGGAGACAATCCTATGGGGATGGC...GGAGAGGTGGAGTGACTGTTCACGGAGAATGCACGGCATGGGGATGAACCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS TCA 90 bp TGTGCTGGGACATCTGAGGAACGAGCACGAAGTCCTTCTCCGCCGTaGCCATCAGGGCCGGAATCAGGATCTTCCGTCCCAAGCTTTTGC +
Preference number: 5 (lower is better)
Translates to: CAGTSEERARSPSPP*PSGPESGSSVPSFC
Trigger: GCAAAAGCTTGGGACGGAAGATCCTGATTCCGGCCCTGATGGTCACGGCGGAGAAGGACTTCGTGCTCGTTCCTCAGATGTCCCAGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS GCA 90 bp GAACTCCAGGCTGTGTGCTCAGGCCTGGGGTTAGAGTCAGCCCTATaGATGCCGAGGGGACCCTGGTTGGGCAACTTAAAGTTCAGAGCT +
Preference number: 5 (lower is better)
Translates to: ELQAVCSGLGLESAL*MPRGPWLGNLKFRA
Trigger: AGCTCTGAACTTTAAGTTGCCCAACCAGGGTCCCCTCGGCATGCATAGGGCTGACTCTAACCCCAGGCCTGAGCACACAGCCTGGAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520623.5
CDS CCA 90 bp TCAGGCCTGGGGTTAGAGTCAGCCCTATGCATGCCGAGGGGACCCTaGTTGGGCAACTTAAAGTTCAGAGCTGGAGAGCTCAGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: SGLGLESALCMPRGP*LGNLKFRAGELRAS
Trigger: AGAAGCCCTGAGCTCTCCAGCTCTGAACTTTAAGTTGCCCAACCAGGGTCCCCTCGGCATGCATAGGGCTGACTCTAACCCCAGGCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520623.5
CDS CCA 90 bp CACTTCCCAGGCTCAGGTTCAGGTGATCCTCACAGCTCAGCCTCTTaGGTGTCTCTGCTGGTCGTTTTAGGTGACCTGGTGGGAGAGCAC +
Preference number: 5 (lower is better)
Translates to: HFPGSGSGDPHSSAS*VSLLVVLGDLVGEH
Trigger: GTGCTCTCCCACCAGGTCACCTAAAACGACCAGCAGAGACACCCAAGAGGCTGAGCTGTGAGGATCACCTGAACCTGAGCCTGGGAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521924.1
CDS-3UTR CAA 90 bp AAAGGGTTCATCCCCATGCCGTGCATTCTCCGTGAACAGTCACTCCACCTCTCCAGAGGGGCCGGGGTATaGAGAAGCTGGATTCCGGTC +
Preference number: 5 (lower is better)
Translates to: KGFIPMPCILREQSLHLSRGAGV*RSWIPV
Trigger: GACCGGAATCCAGCTTCTCAATACCCCGGCCCCTCT...GGAGAGGTGGAGTGACTGTTCACGGAGAATGCACGGCATGGGGATGAACCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS TCA 90 bp ATGGCACACCTGCTGAGCGTGGGCACACGCTGCGTTCTACATCTTTaGGACCACCGGTGGGTTCCGGGCATCAGAATCCAGCCACTTAAT +
Preference number: 5 (lower is better)
Translates to: MAHLLSVGTRCVLHL*DHRWVPGIRIQPLN
Trigger: ATTAAGTGGCTGGATTCTGATGCCCGGAACCCACCGGTGGTCTCAAAGATGTAGAACGCAGCGTGTGCCCACGCTCAGCAGGTGTGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS TCA 90 bp ATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTaGGCGTGGGCACACGCTGCGTTCTACATCTTTGAGACCACCGGT +
Preference number: 5 (lower is better)
Translates to: ILRMVPQQVEGWHTC*AWAHAAFYIFETTG
Trigger: ACCGGTGGTCTCAAAGATGTAGAACGCAGCGTGTGCCCACGCTCAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS GCA 90 bp CAGGCCCCACAGCGTCTGCAGAATGCCAGGGCCGTTTCAGTCCGTTaGTGGATTGTGCATGACCCAGATTTCTCAGTGAAAGACCCCAGT +
Preference number: 5 (lower is better)
Translates to: QAPQRLQNARAVSVR*WIVHDPDFSVKDPS
Trigger: ACTGGGGTCTTTCACTGAGAAATCTGGGTCATGCACAATCCAGCAACGGACTGAAACGGCCCTGGCATTCTGCAGACGCTGTGGGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523326.1
CDS-3UTR CAA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGTCGTCCAGCCAGGTGTaGGTGAGGATGGCAGTAGTG +
Preference number: 5 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLSSSQV*VRMAVV
Trigger: CACTACTGCCATCCTCACCAACACCTGGCTGGACGA...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS TCA 90 bp AACTCTGACCCTTCACTCATACCCAACCCAGGAGGGAGACAAGGATaGGCTCCAGGTGGGGGAATTGGAAACATGGCGCCTGGATGGAGA +
Preference number: 5 (lower is better)
Translates to: NSDPSLIPNPGGRQG*APGGGIGNMAPGWR
Trigger: TCTCCATCCAGGCGCCATGTTTCCAATTCCCCCACCTGGAGCTCATCCTTGTCTCCCTCCTGGGTTGGGTATGAGTGAAGGGTCAGAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520623.5
CDS CCA 90 bp GCCCCACAGCGTCTGCAGAATGCCAGGGCCGTTTCAGTCCGTTGCTaGATTGTGCATGACCCAGATTTCTCAGTGAAAGACCCCAGTGTT +
Preference number: 5 (lower is better)
Translates to: APQRLQNARAVSVRC*IVHDPDFSVKDPSV
Trigger: AACACTGGGGTCTTTCACTGAGAAATCTGGGTCATGCACAATCCAGCAACGGACTGAAACGGCCCTGGCATTCTGCAGACGCTGTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523326.1
CDS-3UTR CAA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGCTCATGTCACTTGGATaGCAAGAGGTCGGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLLMSLG*QEVGRG
Trigger: CCCTCTGCCGACCTCTTGCAATCCAAGTGACATGAG...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGTTCACCTCGGTTGGCTaGTCCATCTGTGTCCAGTGC +
Preference number: 5 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLFTSVG*SICVQC
Trigger: GCACTGGACACAGATGGACAAGCCAACCGAGGTGAA...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp CACGGCCTAGATCATACAGCACCTTGGAGCCCAGAACAGGGCTCAAAAGCAGAGGCTCCAGGTGCACATTaGTGCCTGAGCAAACTCTGC +
Preference number: 5 (lower is better)
Translates to: HGLDHTAPWSPEQGSKAEAPGAH*CLSKLC
Trigger: GCAGAGTTTGCTCAGGCACAAATGTGCACCTGGAGC...CTCTGCTTTTGAGCCCTGTTCTGGGCTCCAAGGTGCTGTATGATCTAGGCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS TCA 90 bp TCCTCACAGCTCAGCCTCTTGGGTGTCTCTGCTGGTCGTTTTAGGTaGCCTGGTGGGAGAGCACTTAGCCGACTGAGAGACAAAACTGAC +
Preference number: 5 (lower is better)
Translates to: SSQLSLLGVSAGRFR*PGGRALSRLRDKTD
Trigger: GTCAGTTTTGTCTCTCAGTCGGCTAAGTGCTCTCCCACCAGGTCACCTAAAACGACCAGCAGAGACACCCAAGAGGCTGAGCTGTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521924.1
CDS-3UTR CAA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGCATGGCTCATGTCACTaGGATTGCAAGAGGTCGGCA +
Preference number: 5 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLHGSCH*DCKRSA
Trigger: TGCCGACCTCTTGCAATCCAAGTGACATGAGCCATG...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGTCTGATTCACCTCGGTaGGCTTGTCCATCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLSDSPR*ACPSVS
Trigger: GGACACAGATGGACAAGCCAACCGAGGTGAATCAGA...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS TCA 90 bp AGAGAGCCATGTACCACACCAGCATGCCACCCCAGTCATGGCCAATaGACACTGCTTGAGAGAGGCCCAGTTTATCCAGGAAGGTTACCA +
Preference number: 5 (lower is better)
Translates to: REPCTTPACHPSHGQ*TLLERGPVYPGRLP
Trigger: TGGTAACCTTCCTGGATAAACTGGGCCTCTCTCAAGCAGTGTTCATTGGCCATGACTGGGGTGGCATGCTGGTGTGGTACATGGCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000520623.5
ENST00000521400.6
ENST00000521684.1
ENST00000521780.5
CDS CCA 90 bp GGAAAGTGTGATCTCTCCTTTCATAAGCCGGGTAGTGGCACCCTCTaGTCCCCCTTTCTGGAAAGCATCATTCAGAAGTCCTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: GKCDLSFHKPGSGTL*SPFLESIIQKSSGQ
Trigger: CTGCCCAGAGGACTTCTGAATGATGCTTTCCAGAAAGGGGGACCAGAGGGTGCCACTACCCGGCTTATGAAAGGAGAGATCACACTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000517536.5
ENST00000518328.5
ENST00000518379.5
ENST00000520623.5
ENST00000521400.6
ENST00000521684.1
CDS-3UTR CAA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCAAGAGGGGCCGGGGTATaGAGAAGCTGGATTCCGGTC +
Preference number: 5 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPRGAGV*RSWIPV
Trigger: GACCGGAATCCAGCTTCTCAATACCCCGGCCCCTCT...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGGCCAATGAACACTGCTaGAGAGAGGCCCAGTTTATC +
Preference number: 5 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLANEHC*REAQFI
Trigger: GATAAACTGGGCCTCTCTCAAGCAGTGTTCATTGGC...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp TGCATTCTCCGTGAACAGTCACTCCACCTCTCCAAGAACAAAGACAGCCAGCAGCTGCGTTCTACATCTTaGAGACCACCGGTGGGTTCC +
Preference number: 5 (lower is better)
Translates to: CILREQSLHLSKNKDSQQLRSTS*RPPVGS
Trigger: GGAACCCACCGGTGGTCTCAAAGATGTAGAACGCAG...CTGCTGGCTGTCTTTGTTCTTGGAGAGGTGGAGTGACTGTTCACGGAGAATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS TCA 90 bp CTGCTGGTCGTTTTAGGTGACCTGGTGGGAGAGCACTTAGCCGACTaGGAGACAAAACTGACTCACCTTTACTGTCACGTACCCATGGCT +
Preference number: 5 (lower is better)
Translates to: LLVVLGDLVGEHLAD*ETKLTHLYCHVPMA
Trigger: AGCCATGGGTACGTGACAGTAAAGGTGAGTCAGTTTTGTCTCTCAGTCGGCTAAGTGCTCTCCCACCAGGTCACCTAAAACGACCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521924.1
CDS CCA 90 bp AGGATGGCAGTAGTGAATCCTTTCTTCCTGAGCATGAGAGCTGCCTaGAGCATGGGGCGGTTGATCTTTCTGGCTGAAATCGCCTTGTCA +
Preference number: 5 (lower is better)
Translates to: RMAVVNPFFLSMRAA*SMGRLIFLAEIALS
Trigger: TGACAAGGCGATTTCAGCCAGAAAGATCAACCGCCCCATGCTCCAGGCAGCTCTCATGCTCAGGAAGAAAGGATTCACTACTGCCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000380476.7
ENST00000518328.5
ENST00000518379.5
ENST00000520623.5
ENST00000520666.1
ENST00000521400.6
ENST00000521684.1
ENST00000521780.5
CDS-3UTR CAA 90 bp TGCATTCTCCGTGAACAGTCACTCCACCTCTCCAAGAACAAAGACAGCCAGCAGTGGAGCATGGGGCGGTaGATCTTTCTGGCTGAAATC +
Preference number: 5 (lower is better)
Translates to: CILREQSLHLSKNKDSQQWSMGR*IFLAEI
Trigger: GATTTCAGCCAGAAAGATCAACCGCCCCATGCTCCA...CTGCTGGCTGTCTTTGTTCTTGGAGAGGTGGAGTGACTGTTCACGGAGAATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CAA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCATCGTCCAGCCAGGTGTaGGTGAGGATGGCAGTAGTG +
Preference number: 5 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPSSSQV*VRMAVV
Trigger: CACTACTGCCATCCTCACCAACACCTGGCTGGACGA...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACAGAGGGGCCGGGGTATaGAGAAGCTGGATTCCGGTC +
Preference number: 5 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYRGAGV*RSWIPV
Trigger: GACCGGAATCCAGCTTCTCAATACCCCGGCCCCTCT...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGTCCAAAGGGGACATGTaGGGATTTGCTGGTATGAAG +
Preference number: 5 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLSKGDM*GFAGMK
Trigger: CTTCATACCAGCAAATCCCAACATGTCCCCTTTGGA...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGAATACTGGGTTGGCTTaGATACTCTCCAAAGGGGAC +
Preference number: 5 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLNTGLA*ILSKGD
Trigger: GTCCCCTTTGGAGAGTATCAAAGCCAACCCAGTATT...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS TCA 90 bp TGGACAAGCTCTAAGACTCCTCCAAGCTCTTACTGCTTAAGATCTTaGAGCCACAGCTCCCTAGAGGGTAGGAACTCCAGGCTGTGTGCT +
Preference number: 5 (lower is better)
Translates to: WTSSKTPPSSYCLRS*SHSSLEGRNSRLCA
Trigger: AGCACACAGCCTGGAGTTCCTACCCTCTAGGGAGCTGTGGCTTCAAGATCTTAAGCAGTAAGAGCTTGGAGGAGTCTTAGAGCTTGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520623.5
CDS CCA 90 bp TGGGTTGGCTTTGATACTCTCCAAAGGGGACATGTTGGGATTTGCTaGTATGAAGGGAGTATTCAAACTGGCCACCGCCCTCACTCTCTC +
Preference number: 5 (lower is better)
Translates to: WVGFDTLQRGHVGIC*YEGSIQTGHRPHSL
Trigger: GAGAGAGTGAGGGCGGTGGCCAGTTTGAATACTCCCTTCATACCAGCAAATCCCAACATGTCCCCTTTGGAGAGTATCAAAGCCAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000520623.5
ENST00000521400.6
ENST00000521780.5
CDS CCA 90 bp GGAAAGTGTGATCTCTCCTTTCATAAGCCGGGTAGTGGCACCCTCTaGTCCCCCTTTCTGGAAAGCATCATTCAGAAGTCCTCTTCAGTC +
Preference number: 5 (lower is better)
Translates to: GKCDLSFHKPGSGTL*SPFLESIIQKSSSV
Trigger: GACTGAAGAGGACTTCTGAATGATGCTTTCCAGAAAGGGGGACCAGAGGGTGCCACTACCCGGCTTATGAAAGGAGAGATCACACTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523827.1
CDS-3UTR CAA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTCGTCCAGCCAGGTGTaGGTGAGGATGGCAGTAGTG +
Preference number: 5 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYSSSQV*VRMAVV
Trigger: CACTACTGCCATCCTCACCAACACCTGGCTGGACGA...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCACTCATGTCACTTGGATaGCAAGAGGTCGGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPLMSLG*QEVGRG
Trigger: CCCTCTGCCGACCTCTTGCAATCCAAGTGACATGAG...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp TGCATTCTCCGTGAACAGTCACTCCACCTCTCCAAGAACAAAGACAGCCAGCAGGCTCTGAAGAGGCTTTaGAAAGTCCGACTCAGGTTC +
Preference number: 5 (lower is better)
Translates to: CILREQSLHLSKNKDSQQALKRL*KVRLRF
Trigger: GAACCTGAGTCGGACTTTCAAAAGCCTCTTCAGAGC...CTGCTGGCTGTCTTTGTTCTTGGAGAGGTGGAGTGACTGTTCACGGAGAATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS-3UTR CAA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCATTCACCTCGGTTGGCTaGTCCATCTGTGTCCAGTGC +
Preference number: 5 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPFTSVG*SICVQC
Trigger: GCACTGGACACAGATGGACAAGCCAACCGAGGTGAA...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCATTCACCTCGGTTGGCTaGTCCATCTGTGTCCAGTGC +
Preference number: 5 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSFTSVG*SICVQC
Trigger: GCACTGGACACAGATGGACAAGCCAACCGAGGTGAA...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCACTGCGTTCTACATCTTaGAGACCACCGGTGGGTTCC +
Preference number: 5 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPLRSTS*RPPVGS
Trigger: GGAACCCACCGGTGGTCTCAAAGATGTAGAACGCAG...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCACTGCGTTCTACATCTTaGAGACCACCGGTGGGTTCC +
Preference number: 5 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSLRSTS*RPPVGS
Trigger: GGAACCCACCGGTGGTCTCAAAGATGTAGAACGCAG...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCAAGATCATACAGCACCTaGGAGCCCAGAACAGGGCTC +
Preference number: 5 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPRSYST*EPRTGL
Trigger: GAGCCCTGTTCTGGGCTCCAAGGTGCTGTATGATCT...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS CCA 90 bp CTGGATTTCCTCCTCAGTGACCATCCTGCTGAGGCTGGGCTCTTCTaGGCTATTTACAAAAAGTCCTCCCGCTTCACAGACTTTATGCAT +
Preference number: 5 (lower is better)
Translates to: LDFLLSDHPAEAGLF*AIYKKSSRFTDFMH
Trigger: ATGCATAAAGTCTGTGAAGCGGGAGGACTTTTTGTAAATAGCCCAGAAGAGCCCAGCCTCAGCAGGATGGTCACTGAGGAGGAAATCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCATGGAGCATGGGGCGGTaGATCTTTCTGGCTGAAATC +
Preference number: 5 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSWSMGR*IFLAEI
Trigger: GATTTCAGCCAGAAAGATCAACCGCCCCATGCTCCA...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACCTCATGTCACTTGGATaGCAAGAGGTCGGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYLMSLG*QEVGRG
Trigger: CCCTCTGCCGACCTCTTGCAATCCAAGTGACATGAG...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTCTCATGTCACTTGGATaGCAAGAGGTCGGCAGAGGG +
Preference number: 5 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGLMSLG*QEVGRG
Trigger: CCCTCTGCCGACCTCTTGCAATCCAAGTGACATGAG...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCACATGGCTCATGTCACTaGGATTGCAAGAGGTCGGCA +
Preference number: 5 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPHGSCH*DCKRSA
Trigger: TGCCGACCTCTTGCAATCCAAGTGACATGAGCCATG...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCACATGGCTCATGTCACTaGGATTGCAAGAGGTCGGCA +
Preference number: 5 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSHGSCH*DCKRSA
Trigger: TGCCGACCTCTTGCAATCCAAGTGACATGAGCCATG...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCATTCCGTCCCAAGCTTTaGCAAGCCCACTTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPFRPKL*QAHFQF
Trigger: GAACTGGAAGTGGGCTTGCAAAAGCTTGGGACGGAA...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCATTCCGTCCCAAGCTTTaGCAAGCCCACTTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSFRPKL*QAHFQF
Trigger: GAACTGGAAGTGGGCTTGCAAAAGCTTGGGACGGAA...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTTCACCTCGGTTGGCTaGTCCATCTGTGTCCAGTGC +
Preference number: 5 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYFTSVG*SICVQC
Trigger: GCACTGGACACAGATGGACAAGCCAACCGAGGTGAA...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCATCTGATTCACCTCGGTaGGCTTGTCCATCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPSDSPR*ACPSVS
Trigger: GGACACAGATGGACAAGCCAACCGAGGTGAATCAGA...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCATCTGATTCACCTCGGTaGGCTTGTCCATCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSSDSPR*ACPSVS
Trigger: GGACACAGATGGACAAGCCAACCGAGGTGAATCAGA...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp CCTCTGTATACTAAGAATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTGCTGCCAAACTATGCATaGGTCAAAGAGAAATCACCA +
Preference number: 5 (lower is better)
Translates to: PLYTKNGAPAGGRMAHLLLPNYA*VKEKSP
Trigger: TGGTGATTTCTCTTTGACCAATGCATAGTTTGGCAG...CAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCATTCTTAGTATACAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp CACGGCCTAGATCATACAGCACCTTGGAGCCCAGAACAGGGCTCAAAAGCAGAGCTGCCAAACTATGCATaGGTCAAAGAGAAATCACCA +
Preference number: 5 (lower is better)
Translates to: HGLDHTAPWSPEQGSKAELPNYA*VKEKSP
Trigger: TGGTGATTTCTCTTTGACCAATGCATAGTTTGGCAG...CTCTGCTTTTGAGCCCTGTTCTGGGCTCCAAGGTGCTGTATGATCTAGGCCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521400.6
CDS TCA 90 bp CCTTCAGGGTGTCCAGCAGAAACTTGTAGATCTGAGGTTCAGGTTTaGCCATTCCCACCTGACACGACTCTATCAGGAAGTCAAAGTGCA +
Preference number: 5 (lower is better)
Translates to: PSGCPAETCRSEVQV*PFPPDTTLSGSQSA
Trigger: TGCACTTTGACTTCCTGATAGAGTCGTGTCAGGTGGGAATGGTCAAACCTGAACCTCAGATCTACAAGTTTCTGCTGGACACCCTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000520623.5
ENST00000520666.1
ENST00000521400.6
ENST00000521684.1
ENST00000521780.5
CDS TCA 90 bp TCTGCAGAATGCCAGGGCCGTTTCAGTCCGTTGCTGGATTGTGCATaGCCCAGATTTCTCAGTGAAAGACCCCAGTGTTACATGAAAATG +
Preference number: 5 (lower is better)
Translates to: SAECQGRFSPLLDCA*PRFLSERPQCYMKM
Trigger: CATTTTCATGTAACACTGGGGTCTTTCACTGAGAAATCTGGGTCATGCACAATCCAGCAACGGACTGAAACGGCCCTGGCATTCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523326.1
CDS CCA 90 bp CTGCCCATAGCAGTCAGAGACAGAAACATCCCTTTAACATTCAGCTaGTTCCAGATATGGCTCTCCCAAGCATGTCTCTTACCCGCTTCA +
Preference number: 5 (lower is better)
Translates to: LPIAVRDRNIPLTFS*FQIWLSQACLLPAS
Trigger: TGAAGCGGGTAAGAGACATGCTTGGGAGAGCCATATCTGGAACCAGCTGAATGTTAAAGGGATGTTTCTGTCTCTGACTGCTATGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520623.5
CDS-3UTR CAA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTTGGAGCATGGGGCGGTaGATCTTTCTGGCTGAAATC +
Preference number: 5 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGWSMGR*IFLAEI
Trigger: GATTTCAGCCAGAAAGATCAACCGCCCCATGCTCCA...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCAAGCCACTCCTGGTTCTaGGAAGTAGAGCTGGTAATC +
Preference number: 5 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPSHSWF*EVELVI
Trigger: GATTACCAGCTCTACTTCCAAGAACCAGGAGTGGCT...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCAGCTCTGAAGAGGCTTTaGAAAGTCCGACTCAGGTTC +
Preference number: 5 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSALKRL*KVRLRF
Trigger: GAACCTGAGTCGGACTTTCAAAAGCCTCTTCAGAGC...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTTCCGTCCCAAGCTTTaGCAAGCCCACTTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYFRPKL*QAHFQF
Trigger: GAACTGGAAGTGGGCTTGCAAAAGCTTGGGACGGAA...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTTTCCGTCCCAAGCTTTaGCAAGCCCACTTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGFRPKL*QAHFQF
Trigger: GAACTGGAAGTGGGCTTGCAAAAGCTTGGGACGGAA...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTCTGATTCACCTCGGTaGGCTTGTCCATCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYSDSPR*ACPSVS
Trigger: GGACACAGATGGACAAGCCAACCGAGGTGAATCAGA...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCAATGAACACTGCTaGAGAGAGGCCCAGTTTATC +
Preference number: 5 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGANEHC*REAQFI
Trigger: GATAAACTGGGCCTCTCTCAAGCAGTGTTCATTGGC...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACGCCAATGAACACTGCTaGAGAGAGGCCCAGTTTATC +
Preference number: 5 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYANEHC*REAQFI
Trigger: GATAAACTGGGCCTCTCTCAAGCAGTGTTCATTGGC...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCATCCAAAGGGGACATGTaGGGATTTGCTGGTATGAAG +
Preference number: 5 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSSKGDM*GFAGMK
Trigger: CTTCATACCAGCAAATCCCAACATGTCCCCTTTGGA...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCAAATACTGGGTTGGCTTaGATACTCTCCAAAGGGGAC +
Preference number: 5 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPNTGLA*ILSKGD
Trigger: GTCCCCTTTGGAGAGTATCAAAGCCAACCCAGTATT...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACAGCCACTCCTGGTTCTaGGAAGTAGAGCTGGTAATC +
Preference number: 5 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYSHSWF*EVELVI
Trigger: GATTACCAGCTCTACTTCCAAGAACCAGGAGTGGCT...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTAGCCACTCCTGGTTCTaGGAAGTAGAGCTGGTAATC +
Preference number: 5 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGSHSWF*EVELVI
Trigger: GATTACCAGCTCTACTTCCAAGAACCAGGAGTGGCT...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACGCTCTGAAGAGGCTTTaGAAAGTCCGACTCAGGTTC +
Preference number: 5 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYALKRL*KVRLRF
Trigger: GAACCTGAGTCGGACTTTCAAAAGCCTCTTCAGAGC...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCTCTGAAGAGGCTTTaGAAAGTCCGACTCAGGTTC +
Preference number: 5 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGALKRL*KVRLRF
Trigger: GAACCTGAGTCGGACTTTCAAAAGCCTCTTCAGAGC...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS CCA 90 bp GTCAGAGACAGAAACATCCCTTTAACATTCAGCTGGTTCCAGATATaGCTCTCCCAAGCATGTCTCTTACCCGCTTCACAGACTTTATGC +
Preference number: 5 (lower is better)
Translates to: VRDRNIPLTFSWFQI*LSQACLLPASQTLC
Trigger: GCATAAAGTCTGTGAAGCGGGTAAGAGACATGCTTGGGAGAGCCATATCTGGAACCAGCTGAATGTTAAAGGGATGTTTCTGTCTCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520623.5
CDS-3UTR CAA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCATTTATGGAGAAATTCTaGGGGAGGCAGACTTTAGCG +
Preference number: 5 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPFMEKF*GRQTLA
Trigger: CGCTAAAGTCTGCCTCCCCAAGAATTTCTCCATAAA...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCATTTATGGAGAAATTCTaGGGGAGGCAGACTTTAGCG +
Preference number: 5 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSFMEKF*GRQTLA
Trigger: CGCTAAAGTCTGCCTCCCCAAGAATTTCTCCATAAA...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTCCAAAGGGGACATGTaGGGATTTGCTGGTATGAAG +
Preference number: 5 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYSKGDM*GFAGMK
Trigger: CTTCATACCAGCAAATCCCAACATGTCCCCTTTGGA...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTTCCAAAGGGGACATGTaGGGATTTGCTGGTATGAAG +
Preference number: 5 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGSKGDM*GFAGMK
Trigger: CTTCATACCAGCAAATCCCAACATGTCCCCTTTGGA...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTAATACTGGGTTGGCTTaGATACTCTCCAAAGGGGAC +
Preference number: 5 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGNTGLA*ILSKGD
Trigger: GTCCCCTTTGGAGAGTATCAAAGCCAACCCAGTATT...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACAATACTGGGTTGGCTTaGATACTCTCCAAAGGGGAC +
Preference number: 5 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYNTGLA*ILSKGD
Trigger: GTCCCCTTTGGAGAGTATCAAAGCCAACCCAGTATT...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCACTGCCAAACTATGCATaGGTCAAAGAGAAATCACCA +
Preference number: 5 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPLPNYA*VKEKSP
Trigger: TGGTGATTTCTCTTTGACCAATGCATAGTTTGGCAG...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCACTGCCAAACTATGCATaGGTCAAAGAGAAATCACCA +
Preference number: 5 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSLPNYA*VKEKSP
Trigger: TGGTGATTTCTCTTTGACCAATGCATAGTTTGGCAG...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp CATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGCCCCACTGGCTGAAATCGCCTaGTCAAAGATTTCTTTTATG +
Preference number: 5 (lower is better)
Translates to: HPCKMCVRPPLYTKNGAPLAEIA*SKISFM
Trigger: CATAAAAGAAATCTTTGACAAGGCGATTTCAGCCAG...TGGGGCACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp CTGTCCCCCTACAGGACACTAAGGGTTCTTACAGATAAAGGGACGATGCATTCAGTCATCTTAGCTTTATaGAGTAAGGCATCCCAATCT +
Preference number: 5 (lower is better)
Translates to: LSPYRTLRVLTDKGTMHSVILAL*SKASQS
Trigger: AGATTGGGATGCCTTACTCAATAAAGCTAAGATGAC...TGAATGCATCGTCCCTTTATCTGTAAGAACCCTTAGTGTCCTGTAGGGGGACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000517536.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACCTGGCTGAAATCGCCTaGTCAAAGATTTCTTTTATG +
Preference number: 5 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYLAEIA*SKISFM
Trigger: CATAAAAGAAATCTTTGACAAGGCGATTTCAGCCAG...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp TGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACTAAGAATGGTGTCATCTTAGCTTTATaGAGTAAGGCATCCCAATCT +
Preference number: 5 (lower is better)
Translates to: CCHPCKMCVRPPLYTKNGVILAL*SKASQS
Trigger: AGATTGGGATGCCTTACTCAATAAAGCTAAGATGAC...ACCATTCTTAGTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517536.5
ENST00000521400.6
ENST00000521780.5
CDS-3UTR CAA 90 bp TTCAGAACAATGCTGCCATCCATGCAAGATGTGTGTAAGGCCACCTCTGTATACGTCATCTTAGCTTTATaGAGTAAGGCATCCCAATCT +
Preference number: 5 (lower is better)
Translates to: FRTMLPSMQDVCKATSVYVILAL*SKASQS
Trigger: AGATTGGGATGCCTTACTCAATAAAGCTAAGATGAC...GTATACAGAGGTGGCCTTACACACATCTTGCATGGATGGCAGCATTGTTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517536.5
ENST00000521400.6
ENST00000521780.5
CDS GCA 72 bp AGTGGCACCCTCTGGGCAGCGCCAGGGCCTCCTCCGTaGGGCCGAGGACGCCGAACACCGCTGGCAGCGCCA +
Preference number: 6 (lower is better)
Translates to: SGTLWAAPGPPP*GRGRRTPLAAP
Trigger: TGGCGCTGCCAGCGGTGTTCGGCGTCCTCGGCCGCACGGAGGAGGCCCTGGCGCTGCCCAGAGGGTGCCACT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380476.7
CDS CCA 72 bp GGCCTCCTCCGTGCGGCCGAGGACGCCGAACACCGCTaGCAGCGCCAGCACCCCGTCAAGGTCGAAGACGGC +
Preference number: 6 (lower is better)
Translates to: GLLRAAEDAEHR*QRQHPVKVEDG
Trigger: GCCGTCTTCGACCTTGACGGGGTGCTGGCGCTGCCAGCGGTGTTCGGCGTCCTCGGCCGCACGGAGGAGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518328.5
ENST00000518379.5
ENST00000520623.5
ENST00000520666.1
ENST00000521400.6
ENST00000521684.1
ENST00000521780.5
CDS GCA 72 bp CGAAGACGGCCGCGCGCAGCGTCATGGCGGCGGGTCTaGAGCCTAGCACCCGGACACGCAGCTAACCCAGGC +
Preference number: 6 (lower is better)
Translates to: RRRPRAASWRRV*SLAPGHAANPG
Trigger: GCCTGGGTTAGCTGCGTGTCCGGGTGCTAGGCTGCAGACCCGCCGCCATGACGCTGCGCGCGGCCGTCTTCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518328.5
CDS GCA 72 bp AGTGGTATCCACTGGGCAGCGCCAGGGCCTCCTCCGTaGGGCCGAGGACGCCGAACACCGCTGGCAGCGCCA +
Preference number: 6 (lower is better)
Translates to: SGIHWAAPGPPP*GRGRRTPLAAP
Trigger: TGGCGCTGCCAGCGGTGTTCGGCGTCCTCGGCCGCACGGAGGAGGCCCTGGCGCTGCCCAGTGGATACCACT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521780.5
CDS CCA 72 bp CCCCGTCAAGGTCGAAGACGGCCGCGCGCAGCGTCATaGCGGCGGGTCTGCAGCCTAGCACCCGGACACGCA +
Preference number: 6 (lower is better)
Translates to: PRQGRRRPRAAS*RRVCSLAPGHA
Trigger: TGCGTGTCCGGGTGCTAGGCTGCAGACCCGCCGCCATGACGCTGCGCGCGGCCGTCTTCGACCTTGACGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518328.5
ENST00000520623.5
ENST00000521400.6
ENST00000521780.5
CDS GCA 72 bp CGAAGACGGCCGCGCGCAGCGTCATGGCGGCGGGTCTaGAGCCTAGCACCCGGACACGCAGCTAACCTGGGA +
Preference number: 6 (lower is better)
Translates to: RRRPRAASWRRV*SLAPGHAANLG
Trigger: TCCCAGGTTAGCTGCGTGTCCGGGTGCTAGGCTGCAGACCCGCCGCCATGACGCTGCGCGCGGCCGTCTTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000517536.5
ENST00000520623.5
ENST00000521400.6
ENST00000521780.5
CDS GCA 72 bp GGCCCAGTGGACCCAGGCCCCACAGCGTCTGCAGAATaGCAGGGCCGTTTCAGTCCGTTGCTGGATTGTGCA +
Preference number: 6 (lower is better)
Translates to: GPVDPGPTASAE*QGRFSPLLDCA
Trigger: TGCACAATCCAGCAACGGACTGAAACGGCCCTGGCATTCTGCAGACGCTGTGGGGCCTGGGTCCACTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523326.1
CDS CAA 72 bp CAGGAGGGAGACAAGGATGAGCTCCAGGTGGGGGAATaGGAAACATGGCGCCTGGATGGAGAGGGGCCAGTG +
Preference number: 6 (lower is better)
Translates to: QEGDKDELQVGE*ETWRLDGEGPV
Trigger: CACTGGCCCCTCTCCATCCAGGCGCCATGTTTCCAATTCCCCCACCTGGAGCTCATCCTTGTCTCCCTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520623.5
CDS CAA 90 bp GGCCTGGGGTTAGAGTCAGCCCTATGCATGCCGAGGGGACCCTGGTaGGGCAACTTAAAGTTCAGAGCTGGAGAGCTCAGGGCTTCTGCC +
Preference number: 6 (lower is better)
Translates to: GLGLESALCMPRGPW*GNLKFRAGELRASA
Trigger: GGCAGAAGCCCTGAGCTCTCCAGCTCTGAACTTTAAGTTGCCCAACCAGGGTCCCCTCGGCATGCATAGGGCTGACTCTAACCCCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520623.5
CDS TCA 72 bp AGGTGGGGAATCCAGTCCTCCATGTGCTGGGACATCTaGGGAACGAGCACGAAGTCCTTCTCCGCCGTGACC +
Preference number: 6 (lower is better)
Translates to: RWGIQSSMCWDI*GTSTKSFSAVT
Trigger: GGTCACGGCGGAGAAGGACTTCGTGCTCGTTCCTCAGATGTCCCAGCACATGGAGGACTGGATTCCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS TCA 72 bp CTGCTGAGCGTGGGCACACGCTGCGTTCTACATCTTTaGGACCACCGGTGGGTTCCGGGCATCAGAATCCAG +
Preference number: 6 (lower is better)
Translates to: LLSVGTRCVLHL*DHRWVPGIRIQ
Trigger: CTGGATTCTGATGCCCGGAACCCACCGGTGGTCTCAAAGATGTAGAACGCAGCGTGTGCCCACGCTCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS TCA 72 bp ATGGTGCCCCAGCAGGTGGAAGGATGGCACACCTGCTaGGCGTGGGCACACGCTGCGTTCTACATCTTTGAG +
Preference number: 6 (lower is better)
Translates to: MVPQQVEGWHTC*AWAHAAFYIFE
Trigger: CTCAAAGATGTAGAACGCAGCGTGTGCCCACGCTCAGCAGGTGTGCCATCCTTCCACCTGCTGGGGCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS GCA 72 bp GCTGTGTGCTCAGGCCTGGGGTTAGAGTCAGCCCTATaGATGCCGAGGGGACCCTGGTTGGGCAACTTAAAG +
Preference number: 6 (lower is better)
Translates to: AVCSGLGLESAL*MPRGPWLGNLK
Trigger: CTTTAAGTTGCCCAACCAGGGTCCCCTCGGCATGCATAGGGCTGACTCTAACCCCAGGCCTGAGCACACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520623.5
CDS CCA 72 bp ATGAGCTCCAGGTGGGGGAATTGGAAACATGGCGCCTaGATGGAGAGGGGCCAGTGGACTGCAATGGAGGAG +
Preference number: 6 (lower is better)
Translates to: MSSRWGNWKHGA*MERGQWTAMEE
Trigger: CTCCTCCATTGCAGTCCACTGGCCCCTCTCCATCCAGGCGCCATGTTTCCAATTCCCCCACCTGGAGCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520623.5
CDS CAA 72 bp CCTGCTGAGCGTGGGCACACGCTGCGTTCTACATCTTaGAGACCACCGGTGGGTTCCGGGCATCAGAATCCA +
Preference number: 6 (lower is better)
Translates to: PAERGHTLRSTS*RPPVGSGHQNP
Trigger: TGGATTCTGATGCCCGGAACCCACCGGTGGTCTCAAAGATGTAGAACGCAGCGTGTGCCCACGCTCAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS CAA 90 bp TACCCAACCCAGGAGGGAGACAAGGATGAGCTCCAGGTGGGGGAATaGGAAACATGGCGCCTGGATGGAGAGGGGCCAGTGGACTGCAAT +
Preference number: 6 (lower is better)
Translates to: YPTQEGDKDELQVGE*ETWRLDGEGPVDCN
Trigger: ATTGCAGTCCACTGGCCCCTCTCCATCCAGGCGCCATGTTTCCAATTCCCCCACCTGGAGCTCATCCTTGTCTCCCTCCTGGGTTGGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520623.5
CDS TCA 72 bp ACATCTGAGGAACGAGCACGAAGTCCTTCTCCGCCGTaGCCATCAGGGCCGGAATCAGGATCTTCCGTCCCA +
Preference number: 6 (lower is better)
Translates to: TSEERARSPSPP*PSGPESGSSVP
Trigger: TGGGACGGAAGATCCTGATTCCGGCCCTGATGGTCACGGCGGAGAAGGACTTCGTGCTCGTTCCTCAGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS CCA 72 bp ATAAGCCGGGTAGTGGCACCCTCTGGTCCCCCTTTCTaGAAAGCATCATTCAGAAGTCCTCTGGGCAGCGCC +
Preference number: 6 (lower is better)
Translates to: ISRVVAPSGPPF*KASFRSPLGSA
Trigger: GGCGCTGCCCAGAGGACTTCTGAATGATGCTTTCCAGAAAGGGGGACCAGAGGGTGCCACTACCCGGCTTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000517536.5
ENST00000518328.5
ENST00000518379.5
ENST00000520623.5
ENST00000521400.6
ENST00000521684.1
CDS CCA 72 bp GACAAGGATGAGCTCCAGGTGGGGGAATTGGAAACATaGCGCCTGGATGGAGAGGGGCCAGTGGACTGCAAT +
Preference number: 6 (lower is better)
Translates to: DKDELQVGELET*RLDGEGPVDCN
Trigger: ATTGCAGTCCACTGGCCCCTCTCCATCCAGGCGCCATGTTTCCAATTCCCCCACCTGGAGCTCATCCTTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520623.5
CDS CAA 90 bp AGCTGGGCCAGGCCATCTCTCTCAGCACGGTCGTCCAGCCAGGTGTaGGTGAGGATGGCAGTAGTGAATCCTTTCTTCCTGAGCATGAGA +
Preference number: 6 (lower is better)
Translates to: SWARPSLSARSSSQV*VRMAVVNPFFLSMR
Trigger: TCTCATGCTCAGGAAGAAAGGATTCACTACTGCCATCCTCACCAACACCTGGCTGGACGACCGTGCTGAGAGAGATGGCCTGGCCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380476.7
ENST00000518328.5
ENST00000518379.5
ENST00000520623.5
ENST00000520666.1
ENST00000521400.6
ENST00000521684.1
ENST00000521780.5
CDS CAA 90 bp ACCCTGGGCTTTACTGTCACGTACCCATGGCTCATGTCACTTGGATaGCAAGAGGTCGGCAGAGGGGCCGGGGTATTGAGAAGCTCACTG +
Preference number: 6 (lower is better)
Translates to: TLGFTVTYPWLMSLG*QEVGRGAGVLRSSL
Trigger: CAGTGAGCTTCTCAATACCCCGGCCCCTCTGCCGACCTCTTGCAATCCAAGTGACATGAGCCATGGGTACGTGACAGTAAAGCCCAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521684.1
CDS TCA 72 bp CCTTCACTCATACCCAACCCAGGAGGGAGACAAGGATaGGCTCCAGGTGGGGGAATTGGAAACATGGCGCCT +
Preference number: 6 (lower is better)
Translates to: PSLIPNPGGRQG*APGGGIGNMAP
Trigger: AGGCGCCATGTTTCCAATTCCCCCACCTGGAGCTCATCCTTGTCTCCCTCCTGGGTTGGGTATGAGTGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520623.5
CDS TCA 72 bp CTCAGCCTCTTGGGTGTCTCTGCTGGTCGTTTTAGGTaGCCTGGTGGGAGAGCACTTAGCCGACTGAGAGAC +
Preference number: 6 (lower is better)
Translates to: LSLLGVSAGRFR*PGGRALSRLRD
Trigger: GTCTCTCAGTCGGCTAAGTGCTCTCCCACCAGGTCACCTAAAACGACCAGCAGAGACACCCAAGAGGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521924.1
CDS CCA 72 bp GGGTTAGAGTCAGCCCTATGCATGCCGAGGGGACCCTaGTTGGGCAACTTAAAGTTCAGAGCTGGAGAGCTC +
Preference number: 6 (lower is better)
Translates to: GLESALCMPRGP*LGNLKFRAGEL
Trigger: GAGCTCTCCAGCTCTGAACTTTAAGTTGCCCAACCAGGGTCCCCTCGGCATGCATAGGGCTGACTCTAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520623.5
CDS CAA 72 bp TGGGCTTTACTGTCACGTACCCATGGCTCATGTCACTaGGATTGCAAGAGGTCGGCAGAGGGGCCGGGGTAT +
Preference number: 6 (lower is better)
Translates to: WALLSRTHGSCH*DCKRSAEGPGY
Trigger: ATACCCCGGCCCCTCTGCCGACCTCTTGCAATCCAAGTGACATGAGCCATGGGTACGTGACAGTAAAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000520623.5
ENST00000521400.6
ENST00000521684.1
ENST00000521780.5
CDS CAA 90 bp ACCCTGGGCTTTACTGTCACGTACCCATGGCTCATGTCACTTGGATaGCAAGAGGTCGGCAGAGGGGCCGGGGTATTGAGAAGCTGGATT +
Preference number: 6 (lower is better)
Translates to: TLGFTVTYPWLMSLG*QEVGRGAGVLRSWI
Trigger: AATCCAGCTTCTCAATACCCCGGCCCCTCTGCCGACCTCTTGCAATCCAAGTGACATGAGCCATGGGTACGTGACAGTAAAGCCCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380476.7
ENST00000520623.5
ENST00000521400.6
ENST00000521780.5
CDS CCA 72 bp TGCAGACGGACCCTGGGCTTTACTGTCACGTACCCATaGCTCATGTCACTTGGATTGCAAGAGGTCGGCAGA +
Preference number: 6 (lower is better)
Translates to: CRRTLGFTVTYP*LMSLGLQEVGR
Trigger: TCTGCCGACCTCTTGCAATCCAAGTGACATGAGCCATGGGTACGTGACAGTAAAGCCCAGGGTCCGTCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000520623.5
ENST00000521400.6
ENST00000521684.1
ENST00000521780.5
CDS CAA 72 bp AGGCCATCTCTCTCAGCACGGTCGTCCAGCCAGGTGTaGGTGAGGATGGCAGTAGTGAATCCTTTCTTCCTG +
Preference number: 6 (lower is better)
Translates to: RPSLSARSSSQV*VRMAVVNPFFL
Trigger: CAGGAAGAAAGGATTCACTACTGCCATCCTCACCAACACCTGGCTGGACGACCGTGCTGAGAGAGATGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380476.7
ENST00000518328.5
ENST00000518379.5
ENST00000520623.5
ENST00000520666.1
ENST00000521400.6
ENST00000521684.1
ENST00000521780.5
CDS CAA 72 bp GGATCTTTACTGTCACGTACCCATGGCTCATGTCACTaGGATTGCAAGAGGTCGGCAGAGGGGCCGGGGTAT +
Preference number: 6 (lower is better)
Translates to: GSLLSRTHGSCH*DCKRSAEGPGY
Trigger: ATACCCCGGCCCCTCTGCCGACCTCTTGCAATCCAAGTGACATGAGCCATGGGTACGTGACAGTAAAGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518379.5
CDS CAA 72 bp TTAGAGTCAGCCCTATGCATGCCGAGGGGACCCTGGTaGGGCAACTTAAAGTTCAGAGCTGGAGAGCTCAGG +
Preference number: 6 (lower is better)
Translates to: LESALCMPRGPW*GNLKFRAGELR
Trigger: CCTGAGCTCTCCAGCTCTGAACTTTAAGTTGCCCAACCAGGGTCCCCTCGGCATGCATAGGGCTGACTCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520623.5
CDS CAA 72 bp TCACCTTTACTGTCACGTACCCATGGCTCATGTCACTaGGATTGCAAGAGGTCGGCAGAGGGGCCGGGGTAT +
Preference number: 6 (lower is better)
Translates to: SPLLSRTHGSCH*DCKRSAEGPGY
Trigger: ATACCCCGGCCCCTCTGCCGACCTCTTGCAATCCAAGTGACATGAGCCATGGGTACGTGACAGTAAAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521924.1
CDS CAA 90 bp GCAGGGATCTTTACTGTCACGTACCCATGGCTCATGTCACTTGGATaGCAAGAGGTCGGCAGAGGGGCCGGGGTATTGAGAAGCTGGATT +
Preference number: 6 (lower is better)
Translates to: AGIFTVTYPWLMSLG*QEVGRGAGVLRSWI
Trigger: AATCCAGCTTCTCAATACCCCGGCCCCTCTGCCGACCTCTTGCAATCCAAGTGACATGAGCCATGGGTACGTGACAGTAAAGATCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518379.5
CDS TCA 72 bp TGTACCACACCAGCATGCCACCCCAGTCATGGCCAATaGACACTGCTTGAGAGAGGCCCAGTTTATCCAGGA +
Preference number: 6 (lower is better)
Translates to: CTTPACHPSHGQ*TLLERGPVYPG
Trigger: TCCTGGATAAACTGGGCCTCTCTCAAGCAGTGTTCATTGGCCATGACTGGGGTGGCATGCTGGTGTGGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000520623.5
ENST00000521400.6
ENST00000521684.1
ENST00000521780.5
ENST00000523326.1
CDS CCA 72 bp CTCCTCAGTGACCATCCTGCTGAGGCTGGGCTCTTCTaGGCTATTTACAAAAAGTCCTCCCGCTTCACAGAC +
Preference number: 6 (lower is better)
Translates to: LLSDHPAEAGLF*AIYKKSSRFTD
Trigger: GTCTGTGAAGCGGGAGGACTTTTTGTAAATAGCCCAGAAGAGCCCAGCCTCAGCAGGATGGTCACTGAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS CCA 72 bp TGGGCCAGAGCAGGGATCTTTACTGTCACGTACCCATaGCTCATGTCACTTGGATTGCAAGAGGTCGGCAGA +
Preference number: 6 (lower is better)
Translates to: WARAGIFTVTYP*LMSLGLQEVGR
Trigger: TCTGCCGACCTCTTGCAATCCAAGTGACATGAGCCATGGGTACGTGACAGTAAAGATCCCTGCTCTGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518379.5
CDS CCA 72 bp ATAAGCCGGGTAGTGGCACCCTCTGGTCCCCCTTTCTaGAAAGCATCATTCAGAAGTCCTCTTCAGTCCCTG +
Preference number: 6 (lower is better)
Translates to: ISRVVAPSGPPF*KASFRSPLQSL
Trigger: CAGGGACTGAAGAGGACTTCTGAATGATGCTTTCCAGAAAGGGGGACCAGAGGGTGCCACTACCCGGCTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523827.1
CDS CAA 72 bp TTTACTGTCACGTACCCATGGCTCATGTCACTTGGATaGCAAGAGGTCGGCAGAGGGGCCGGGGTATTGAGA +
Preference number: 6 (lower is better)
Translates to: FTVTYPWLMSLG*QEVGRGAGVLR
Trigger: TCTCAATACCCCGGCCCCTCTGCCGACCTCTTGCAATCCAAGTGACATGAGCCATGGGTACGTGACAGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000520623.5
ENST00000521400.6
ENST00000521684.1
ENST00000521780.5
ENST00000521924.1
CDS TCA 72 bp TGCCAGGGCCGTTTCAGTCCGTTGCTGGATTGTGCATaGCCCAGATTTCTCAGTGAAAGACCCCAGTGTTAC +
Preference number: 6 (lower is better)
Translates to: CQGRFSPLLDCA*PRFLSERPQCY
Trigger: GTAACACTGGGGTCTTTCACTGAGAAATCTGGGTCATGCACAATCCAGCAACGGACTGAAACGGCCCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523326.1
CDS GCA 72 bp CAGCGTCTGCAGAATGCCAGGGCCGTTTCAGTCCGTTaGTGGATTGTGCATGACCCAGATTTCTCAGTGAAA +
Preference number: 6 (lower is better)
Translates to: QRLQNARAVSVR*WIVHDPDFSVK
Trigger: TTTCACTGAGAAATCTGGGTCATGCACAATCCAGCAACGGACTGAAACGGCCCTGGCATTCTGCAGACGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523326.1
CDS CCA 72 bp GATCTCTCCTTTCATAAGCCGGGTAGTGGCACCCTCTaGTCCCCCTTTCTGGAAAGCATCATTCAGAAGTCC +
Preference number: 6 (lower is better)
Translates to: DLSFHKPGSGTL*SPFLESIIQKS
Trigger: GGACTTCTGAATGATGCTTTCCAGAAAGGGGGACCAGAGGGTGCCACTACCCGGCTTATGAAAGGAGAGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000517536.5
ENST00000518328.5
ENST00000518379.5
ENST00000520623.5
ENST00000520666.1
ENST00000521400.6
ENST00000521684.1
ENST00000523827.1
CDS CCA 72 bp CGTCTGCAGAATGCCAGGGCCGTTTCAGTCCGTTGCTaGATTGTGCATGACCCAGATTTCTCAGTGAAAGAC +
Preference number: 6 (lower is better)
Translates to: RLQNARAVSVRC*IVHDPDFSVKD
Trigger: GTCTTTCACTGAGAAATCTGGGTCATGCACAATCCAGCAACGGACTGAAACGGCCCTGGCATTCTGCAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523326.1
CDS CCA 72 bp CCTGGGGTCCTTATCAGTAGAGGGTGGATTTTGCCCTaGACAAGCTCTAAGACTCCTCCAAGCTCTTACTGC +
Preference number: 6 (lower is better)
Translates to: PGVLISRGWILP*TSSKTPPSSYC
Trigger: GCAGTAAGAGCTTGGAGGAGTCTTAGAGCTTGTCCAGGGCAAAATCCACCCTCTACTGATAAGGACCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520623.5
CDS CAA 72 bp ATCAGGGCCGGAATCAGGATCTTCCGTCCCAAGCTTTaGCAAGCCCACTTCCAGTTCCTTTCCATGTTTCGG +
Preference number: 6 (lower is better)
Translates to: IRAGIRIFRPKL*QAHFQFLSMFR
Trigger: CCGAAACATGGAAAGGAACTGGAAGTGGGCTTGCAAAAGCTTGGGACGGAAGATCCTGATTCCGGCCCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS TCA 72 bp TACTCTCCAAAGGGGACATGTTGGGATTTGCTGGTATaGAGGGAGTATTCAAACTGGCCACCGCCCTCACTC +
Preference number: 6 (lower is better)
Translates to: YSPKGTCWDLLV*REYSNWPPPSL
Trigger: GAGTGAGGGCGGTGGCCAGTTTGAATACTCCCTTCATACCAGCAAATCCCAACATGTCCCCTTTGGAGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000520623.5
ENST00000521400.6
ENST00000521780.5
CDS TCA 72 bp TTCCGGGCATCAGAATCCAGCCACTTAATGAGGATCTaGTTCACCTCGGTTGGCTTGTCCATCTGTGTCCAG +
Preference number: 6 (lower is better)
Translates to: FRASESSHLMRI*FTSVGLSICVQ
Trigger: CTGGACACAGATGGACAAGCCAACCGAGGTGAATCAGATCCTCATTAAGTGGCTGGATTCTGATGCCCGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5
CDS TCA 72 bp GTTTTAGGTGACCTGGTGGGAGAGCACTTAGCCGACTaGGAGACAAAACTGACTCACCTTTACTGTCACGTA +
Preference number: 6 (lower is better)
Translates to: VLGDLVGEHLAD*ETKLTHLYCHV
Trigger: TACGTGACAGTAAAGGTGAGTCAGTTTTGTCTCTCAGTCGGCTAAGTGCTCTCCCACCAGGTCACCTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521924.1
CDS CCA 72 bp TTTGATACTCTCCAAAGGGGACATGTTGGGATTTGCTaGTATGAAGGGAGTATTCAAACTGGCCACCGCCCT +
Preference number: 6 (lower is better)
Translates to: FDTLQRGHVGIC*YEGSIQTGHRP
Trigger: AGGGCGGTGGCCAGTTTGAATACTCCCTTCATACCAGCAAATCCCAACATGTCCCCTTTGGAGAGTATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000520623.5
ENST00000521400.6
ENST00000521780.5
CDS CAA 90 bp CTGGCTGAAATCGCCTTGTCAAAGATTTCTTTTATGGAGAAATTCTaGGGGAGGCAGACTTTAGCGGTCTCGGAGCACTTCCTGCAGTTT +
Preference number: 6 (lower is better)
Translates to: LAEIALSKISFMEKF*GRQTLAVSEHFLQF
Trigger: AAACTGCAGGAAGTGCTCCGAGACCGCTAAAGTCTGCCTCCCCAAGAATTTCTCCATAAAAGAAATCTTTGACAAGGCGATTTCAGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000380476.7
ENST00000518328.5
ENST00000518379.5
ENST00000520623.5
ENST00000520666.1
ENST00000521400.6
ENST00000521684.1
ENST00000521780.5
ENST00000523827.1
CDS TCA 72 bp TGTCCAGCAGAAACTTGTAGATCTGAGGTTCAGGTTTaGCCATTCCCACCTGACACGACTCTATCAGGAAGT +
Preference number: 6 (lower is better)
Translates to: CPAETCRSEVQV*PFPPDTTLSGS
Trigger: ACTTCCTGATAGAGTCGTGTCAGGTGGGAATGGTCAAACCTGAACCTCAGATCTACAAGTTTCTGCTGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000380476.7
ENST00000518379.5
ENST00000520623.5
ENST00000520666.1
ENST00000521400.6
ENST00000521684.1
ENST00000521780.5
ENST00000521924.1
CDS CCA 72 bp AGAAACATCCCTTTAACATTCAGCTGGTTCCAGATATaGCTCTCCCAAGCATGTCTCTTACCCGCTTCACAG +
Preference number: 6 (lower is better)
Translates to: RNIPLTFSWFQI*LSQACLLPASQ
Trigger: CTGTGAAGCGGGTAAGAGACATGCTTGGGAGAGCCATATCTGGAACCAGCTGAATGTTAAAGGGATGTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520623.5
CDS TCA 72 bp GGAAGTAGAGCTGGTAATCAAATACTGGGTTGGCTTTaGTACTCTCCAAAGGGGACATGTTGGGATTTGCTG +
Preference number: 6 (lower is better)
Translates to: GSRAGNQILGWL*YSPKGTCWDLL
Trigger: CAGCAAATCCCAACATGTCCCCTTTGGAGAGTATCAAAGCCAACCCAGTATTTGATTACCAGCTCTACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000520623.5
ENST00000521400.6
ENST00000521780.5
CDS GCA 72 bp TCCCAAGCATGTCTCTTACCCGCTTCACAGACTTTATaGATGGATAAAACACTCTCATCGCTTGCTCTGAAG +
Preference number: 6 (lower is better)
Translates to: SQACLLPASQTL*MDKTLSSLALK
Trigger: CTTCAGAGCAAGCGATGAGAGTGTTTTATCCATGCATAAAGTCTGTGAAGCGGGTAAGAGACATGCTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520623.5
CDS CCA 72 bp GCAGTCAGAGACAGAAACATCCCTTTAACATTCAGCTaGTTCCAGATATGGCTCTCCCAAGCATGTCTCTTA +
Preference number: 6 (lower is better)
Translates to: AVRDRNIPLTFS*FQIWLSQACLL
Trigger: TAAGAGACATGCTTGGGAGAGCCATATCTGGAACCAGCTGAATGTTAAAGGGATGTTTCTGTCTCTGACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520623.5
CDS CAA 72 bp ATCGCCTTGTCAAAGATTTCTTTTATGGAGAAATTCTaGGGGAGGCAGACTTTAGCGGTCTCGGAGCACTTC +
Preference number: 6 (lower is better)
Translates to: IALSKISFMEKF*GRQTLAVSEHF
Trigger: GAAGTGCTCCGAGACCGCTAAAGTCTGCCTCCCCAAGAATTTCTCCATAAAAGAAATCTTTGACAAGGCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000380476.7
ENST00000518328.5
ENST00000518379.5
ENST00000520623.5
ENST00000520666.1
ENST00000521400.6
ENST00000521684.1
ENST00000521780.5
ENST00000523827.1
CDS CAA 72 bp AGCATGGGGCGGTTGATCTTTCTGGCTGAAATCGCCTaGTCAAAGATTTCTTTTATGGAGAAATTCTTGGGG +
Preference number: 6 (lower is better)
Translates to: SMGRLIFLAEIA*SKISFMEKFLG
Trigger: CCCCAAGAATTTCTCCATAAAAGAAATCTTTGACAAGGCGATTTCAGCCAGAAAGATCAACCGCCCCATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000380476.7
ENST00000518328.5
ENST00000518379.5
ENST00000520623.5
ENST00000520666.1
ENST00000521400.6
ENST00000521684.1
ENST00000521780.5
ENST00000523827.1
CDS GCA 72 bp CTATTTACAAAAAGTCCTCCCGCTTCACAGACTTTATaGATGGATAAAACACTCTCATCGCTTGCTCTGAAG +
Preference number: 6 (lower is better)
Translates to: LFTKSPPASQTL*MDKTLSSLALK
Trigger: CTTCAGAGCAAGCGATGAGAGTGTTTTATCCATGCATAAAGTCTGTGAAGCGGGAGGACTTTTTGTAAATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000380476.7
ENST00000517536.5
ENST00000518379.5
ENST00000521400.6
ENST00000521780.5