RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPHB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000133216

Ensembl transcript IDs: ENST00000374627.1, ENST00000374630.8, ENST00000374632.7, ENST00000400191.7, ENST00000465676.1, ENST00000490436.1, ENST00000544305.5

Found 1734 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTaGCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTG +
Preference number: 1 (lower is better)
Translates to: LAPLGSSRGPWPPGE*LALQWIEHQEGRHV
Trigger: CACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
3UTR CCA 90 bp CTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTaGCGAGTGGCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCG +
Preference number: 1 (lower is better)
Translates to: LVAGTAWFFPWPVAS*RVAGPAVDRAPGGP
Trigger: CGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
3UTR CCA 90 bp GGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTaGCCTCCTGGCGAGTGGCTGGCCCTGCAGTGGATAGAGCACCAG +
Preference number: 1 (lower is better)
Translates to: GDVSWLAPLGSSRGP*PPGEWLALQWIEHQ
Trigger: CTGGTGCTCTATCCACTGCAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
3UTR TCA 90 bp GCCGAGACAGCTGCCACCCGCGCAGGGCACCTTTGGGGCACAAAGTaGAGGCCAGTGGGCCACTGCCGGCCAGTTTGTGGGAAACCTGCC +
Preference number: 1 (lower is better)
Translates to: AETAATRAGHLWGTK*RPVGHCRPVCGKPA
Trigger: GGCAGGTTTCCCACAAACTGGCCGGCAGTGGCCCACTGGCCTTCACTTTGTGCCCCAAAGGTGCCCTGCGCGGGTGGCAGCTGTCTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp GCGGGTGGCTCAGAGCTGTGTGCCTGGGTGAGCGGGTGGTGTAAGTaGAAGGCGCTTGGCAACATGGCCTGCCACTCCCCGCTGAGCAGC +
Preference number: 1 (lower is better)
Translates to: AGGSELCAWVSGWCK*KALGNMACHSPLSS
Trigger: GCTGCTCAGCGGGGAGTGGCAGGCCATGTTGCCAAGCGCCTTCCACTTACACCACCCGCTCACCCAGGCACACAGCTCTGAGCCACCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp GCAGTAGGGGTGCGGGTGGGTAGCATGGCTCTCTCCTACCCAGCCTaGCGCTGCACAGCTCTGCTAGCTGCACCCTCCCAGAGCAGCTGG +
Preference number: 1 (lower is better)
Translates to: AVGVRVGSMALSYPA*RCTALLAAPSQSSW
Trigger: CCAGCTGCTCTGGGAGGGTGCAGCTAGCAGAGCTGTGCAGCGCCAGGCTGGGTAGGAGAGAGCCATGCTACCCACCCGCACCCCTACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 90 bp AGCACCTGTGCTCTGGGAAGCAGGTTTGCAGGGGGCCATGGCCACTaGGGACCTCGGCCCTGGAGGGTGGAGGGGCAGACATGCTGGCTA +
Preference number: 1 (lower is better)
Translates to: STCALGSRFAGGHGH*GPRPWRVEGQTCWL
Trigger: TAGCCAGCATGTCTGCCCCTCCACCCTCCAGGGCCGAGGTCCTCAGTGGCCATGGCCCCCTGCAAACCTGCTTCCCAGAGCACAGGTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 90 bp TCCCTGCCTGGCCTATGCTGGGCCAGCCTCAGAGGCTCAACTTGGTaGCCCCTGCCCATCAGAGTCCCTCTCCACAGAGGGGAAAGCGGC +
Preference number: 1 (lower is better)
Translates to: SLPGLCWASLRGSTW*PLPIRVPLHRGESG
Trigger: GCCGCTTTCCCCTCTGTGGAGAGGGACTCTGATGGGCAGGGGGCACCAAGTTGAGCCTCTGAGGCTGGCCCAGCATAGGCCAGGCAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp GCACCAGGAGGGCCAGGCTGCCAGGCTGTGCGCGTGATATGTACCTaGAGCTGCAGACCTGGGGGTTGCCCATCCTCAGGAAGGCTGACC +
Preference number: 1 (lower is better)
Translates to: APGGPGCQAVRVICT*SCRPGGCPSSGRLT
Trigger: GGTCAGCCTTCCTGAGGATGGGCAACCCCCAGGTCTGCAGCTCCAGGTACATATCACGCGCACAGCCTGGCAGCCTGGCCCTCCTGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp AACCAGGCAGCGGGTGGCTCAGAGCTGTGTGCCTGGGTGAGCGGGTaGTGTAAGTGGAAGGCGCTTGGCAACATGGCCTGCCACTCCCCG +
Preference number: 1 (lower is better)
Translates to: NQAAGGSELCAWVSG*CKWKALGNMACHSP
Trigger: CGGGGAGTGGCAGGCCATGTTGCCAAGCGCCTTCCACTTACACCACCCGCTCACCCAGGCACACAGCTCTGAGCCACCCGCTGCCTGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 90 bp CAGGATCAACCCTTCTCAGCGGCAGTCGGAGCTGACGGCAGTCACTaGAGTATCAGTCCTCGAGGCAGGGGCTGGCGGGAGTGGGCACCA +
Preference number: 1 (lower is better)
Translates to: QDQPFSAAVGADGSH*SISPRGRGWREWAP
Trigger: TGGTGCCCACTCCCGCCAGCCCCTGCCTCGAGGACTGATACTGCAGTGACTGCCGTCAGCTCCGACTGCCGCTGAGAAGGGTTGATCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp GCCTGGCGCTGCACAGCTCTGCTAGCTGCACCCTCCCAGAGCAGCTaGTCCCCATTTCCACGGTGCCCTGGCCTGTGTTTACAAGGCAGC +
Preference number: 1 (lower is better)
Translates to: AWRCTALLAAPSQSS*SPFPRCPGLCLQGS
Trigger: GCTGCCTTGTAAACACAGGCCAGGGCACCGTGGAAATGGGGACCAGCTGCTCTGGGAGGGTGCAGCTAGCAGAGCTGTGCAGCGCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 90 bp GAGTCCCTCTCCACAGAGGGGAAAGCGGCCAGGCTGATGACGGAGTaGTTCACAGGCACCTCTGCCGTGTGGCCTCCCAGCTCTGGAAGG +
Preference number: 1 (lower is better)
Translates to: ESLSTEGKAARLMTE*FTGTSAVWPPSSGR
Trigger: CCTTCCAGAGCTGGGAGGCCACACGGCAGAGGTGCCTGTGAATCACTCCGTCATCAGCCTGGCCGCTTTCCCCTCTGTGGAGAGGGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 90 bp GGAGGGCCAGGCTGCCAGGCTGTGCGCGTGATATGTACCTGGAGCTaGAGACCTGGGGGTTGCCCATCCTCAGGAAGGCTGACCTTTCTG +
Preference number: 1 (lower is better)
Translates to: GGPGCQAVRVICTWS*RPGGCPSSGRLTFL
Trigger: CAGAAAGGTCAGCCTTCCTGAGGATGGGCAACCCCCAGGTCTGCAGCTCCAGGTACATATCACGCGCACAGCCTGGCAGCCTGGCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 90 bp TCAGGGCAGCTCCCACCAGAAGGTGACCTTGTGTGCCGAGACAGCTaGCACCCGCGCAGGGCACCTTTGGGGCACAAAGTGAAGGCCAGT +
Preference number: 1 (lower is better)
Translates to: SGQLPPEGDLVCRDS*HPRRAPLGHKVKAS
Trigger: ACTGGCCTTCACTTTGTGCCCCAAAGGTGCCCTGCGCGGGTGGCAGCTGTCTCGGCACACAAGGTCACCTTCTGGTGGGAGCTGCCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp AGGCTGCCAGGCTGTGCGCGTGATATGTACCTGGAGCTGCAGACCTaGGGGTTGCCCATCCTCAGGAAGGCTGACCTTTCTGGGGTCCCC +
Preference number: 1 (lower is better)
Translates to: RLPGCARDMYLELQT*GLPILRKADLSGVP
Trigger: GGGGACCCCAGAAAGGTCAGCCTTCCTGAGGATGGGCAACCCCCAGGTCTGCAGCTCCAGGTACATATCACGCGCACAGCCTGGCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp CTGCCACCCGCGCAGGGCACCTTTGGGGCACAAAGTGAAGGCCAGTaGGCCACTGCCGGCCAGTTTGTGGGAAACCTGCCAATGCTTTCC +
Preference number: 1 (lower is better)
Translates to: LPPAQGTFGAQSEGQ*ATAGQFVGNLPMLS
Trigger: GGAAAGCATTGGCAGGTTTCCCACAAACTGGCCGGCAGTGGCCCACTGGCCTTCACTTTGTGCCCCAAAGGTGCCCTGCGCGGGTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 90 bp CACCTTGGCGCCTCCCCCTCCACACCCAAATCTCACTCCAGTCTCTaGATGGCCCAGATGGCCCCATGGCAGTGGGCTTTGGTGAGGCCT +
Preference number: 1 (lower is better)
Translates to: HLGASPSTPKSHSSL*MAQMAPWQWALVRP
Trigger: AGGCCTCACCAAAGCCCACTGCCATGGGGCCATCTGGGCCATTCAGAGACTGGAGTGAGATTTGGGTGTGGAGGGGGAGGCGCCAAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 90 bp CGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATaGTCCGGGTCCTGGCCTCCGATGCAGCCTGGTTTAGGCTCCCAG +
Preference number: 1 (lower is better)
Translates to: RVSERTLWRAGYHSE*SGSWPPMQPGLGSQ
Trigger: CTGGGAGCCTAAACCAGGCTGCATCGGAGGCCAGGACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 90 bp GGATTAGTAACCAGGCAGCGGGTGGCTCAGAGCTGTGTGCCTGGGTaGGCGGGTGGTGTAAGTGGAAGGCGCTTGGCAACATGGCCTGCC +
Preference number: 1 (lower is better)
Translates to: GLVTRQRVAQSCVPG*AGGVSGRRLATWPA
Trigger: GGCAGGCCATGTTGCCAAGCGCCTTCCACTTACACCACCCGCTCACCCAGGCACACAGCTCTGAGCCACCCGCTGCCTGGTTACTAATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp GAGGGAAATTCCACCCCAGATGAGTCCCTCCCCAGACTGAGCCAGTaGGGCCCTGCTTGGTTCCTAGGTCCACCAGCCAGTGGGCACTGT +
Preference number: 1 (lower is better)
Translates to: EGNSTPDESLPRLSQ*GPAWFLGPPASGHC
Trigger: ACAGTGCCCACTGGCTGGTGGACCTAGGAACCAAGCAGGGCCCCACTGGCTCAGTCTGGGGAGGGACTCATCTGGGGTGGAATTTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 90 bp ACAAACCCAGATGCAGGATCAACCCTTCTCAGCGGCAGTCGGAGCTaGCGGCAGTCACTGCAGTATCAGTCCTCGAGGCAGGGGCTGGCG +
Preference number: 1 (lower is better)
Translates to: TNPDAGSTLLSGSRS*RQSLQYQSSRQGLA
Trigger: CGCCAGCCCCTGCCTCGAGGACTGATACTGCAGTGACTGCCGTCAGCTCCGACTGCCGCTGAGAAGGGTTGATCCTGCATCTGGGTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 90 bp TTGCAGTCTCAGCAGGGCCCCCAAGAGTGTATGTGGTCCTGGCTGTaGCCTCCTCCCTCCTCCCTCTCCTGCTCCCTCTCCTTCAACAGG +
Preference number: 1 (lower is better)
Translates to: LQSQQGPQECMWSWL*PPPSSLSCSLSFNR
Trigger: CCTGTTGAAGGAGAGGGAGCAGGAGAGGGAGGAGGGAGGAGGTCACAGCCAGGACCACATACACTCTTGGGGGCCCTGCTGAGACTGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 90 bp CTCAGGCTCCCGGAACAGGTGAGTGACAGACGATGGGCTGTGCTGTaGTGGATGTTCACTCTGACCGTGGCGCTTCTAGCTGGCTGCCTG +
Preference number: 1 (lower is better)
Translates to: LRLPEQVSDRRWAVL*WMFTLTVALLAGCL
Trigger: CAGGCAGCCAGCTAGAAGCGCCACGGTCAGAGTGAACATCCAGCACAGCACAGCCCATCGTCTGTCACTCACCTGTTCCGGGAGCCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp AGGCTCCCGGAACAGGTGAGTGACAGACGATGGGCTGTGCTGTGCTaGATGTTCACTCTGACCGTGGCGCTTCTAGCTGGCTGCCTGTGG +
Preference number: 1 (lower is better)
Translates to: RLPEQVSDRRWAVLC*MFTLTVALLAGCLW
Trigger: CCACAGGCAGCCAGCTAGAAGCGCCACGGTCAGAGTGAACATCCAGCACAGCACAGCCCATCGTCTGTCACTCACCTGTTCCGGGAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp TTGGGGCACAAAGTGAAGGCCAGTGGGCCACTGCCGGCCAGTTTGTaGGAAACCTGCCAATGCTTTCCCTGTGGCTTGCCCTGCTGTCCC +
Preference number: 1 (lower is better)
Translates to: LGHKVKASGPLPASL*ETCQCFPCGLPCCP
Trigger: GGGACAGCAGGGCAAGCCACAGGGAAAGCATTGGCAGGTTTCCCACAAACTGGCCGGCAGTGGCCCACTGGCCTTCACTTTGTGCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 90 bp GAAACCCTGCCAGACAGCCCCATACCCTGGTTGAGAGCTCCGGTCTaGATAGCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTGTGC +
Preference number: 1 (lower is better)
Translates to: ETLPDSPIPWLRAPV*IAQAGADTSGEGVC
Trigger: GCACACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGGTATGGGGCTGTCTGGCAGGGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp GGACATGATCTATTCCTCACCCTCCAGATCACCCCACTTGGCTGGTaGGGCCGGTGGAGAGGGGGTGCTAAGGTGACAAGCAGAAGTGGC +
Preference number: 1 (lower is better)
Translates to: GHDLFLTLQITPLGW*GRWRGGAKVTSRSG
Trigger: GCCACTTCTGCTTGTCACCTTAGCACCCCCTCTCCACCGGCCCCACCAGCCAAGTGGGGTGATCTGGAGGGTGAGGAATAGATCATGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR CCA 90 bp GCTGCCTGTGGCCCGAATCTTTCTCACTGGCCATCTCCTCGGATCTaGGAAAGGTCCCGAGAGGTAGTCTCCTTGGCTCCCCTTCCTCAG +
Preference number: 1 (lower is better)
Translates to: AACGPNLSHWPSPRI*ERSREVVSLAPLPQ
Trigger: CTGAGGAAGGGGAGCCAAGGAGACTACCTCTCGGGACCTTTCCCAGATCCGAGGAGATGGCCAGTGAGAAAGATTCGGGCCACAGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp GGCTGTGCTGTGCTGGATGTTCACTCTGACCGTGGCGCTTCTAGCTaGCTGCCTGTGGCCCGAATCTTTCTCACTGGCCATCTCCTCGGA +
Preference number: 1 (lower is better)
Translates to: GCAVLDVHSDRGASS*LPVARIFLTGHLLG
Trigger: TCCGAGGAGATGGCCAGTGAGAAAGATTCGGGCCACAGGCAGCCAGCTAGAAGCGCCACGGTCAGAGTGAACATCCAGCACAGCACAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp GAAAGGATTAGTAACCAGGCAGCGGGTGGCTCAGAGCTGTGTGCCTaGGTGAGCGGGTGGTGTAAGTGGAAGGCGCTTGGCAACATGGCC +
Preference number: 1 (lower is better)
Translates to: ERISNQAAGGSELCA*VSGWCKWKALGNMA
Trigger: GGCCATGTTGCCAAGCGCCTTCCACTTACACCACCCGCTCACCCAGGCACACAGCTCTGAGCCACCCGCTGCCTGGTTACTAATCCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 90 bp ATGTCCCTTTGGGAGAGAAGCACGTGTGTTAGGGAAATATGCGGGTaGAGGGGTCCTGTGCCTGGTAGAGAGCTGCCTGGGCTTCCCCGG +
Preference number: 1 (lower is better)
Translates to: MSLWERSTCVREICG*RGPVPGRELPGLPR
Trigger: CCGGGGAAGCCCAGGCAGCTCTCTACCAGGCACAGGACCCCTTCACCCGCATATTTCCCTAACACACGTGCTTCTCTCCCAAAGGGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR GCA 90 bp AGAGAAGCACGTGTGTTAGGGAAATATGCGGGTGAAGGGGTCCTGTaGCTGGTAGAGAGCTGCCTGGGCTTCCCCGGGAGGAAGATGGCA +
Preference number: 1 (lower is better)
Translates to: REARVLGKYAGEGVL*LVESCLGFPGRKMA
Trigger: TGCCATCTTCCTCCCGGGGAAGCCCAGGCAGCTCTCTACCAGGCACAGGACCCCTTCACCCGCATATTTCCCTAACACACGTGCTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR GCA 90 bp GTGCTGTGCTGGATGTTCACTCTGACCGTGGCGCTTCTAGCTGGCTaGCTGTGGCCCGAATCTTTCTCACTGGCCATCTCCTCGGATCTG +
Preference number: 1 (lower is better)
Translates to: VLCWMFTLTVALLAG*LWPESFSLAISSDL
Trigger: CAGATCCGAGGAGATGGCCAGTGAGAAAGATTCGGGCCACAGGCAGCCAGCTAGAAGCGCCACGGTCAGAGTGAACATCCAGCACAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp TTTCCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTaGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGT +
Preference number: 1 (lower is better)
Translates to: FPSFELHVFLVTSRG*HRLVLPVARGLLAS
Trigger: ACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000374632.7
3UTR CCA 90 bp CCTCCCTCTCCTGCTCCCTCTCCTTCAACAGGGGCCGTTAGGTCTTaGGTAGAGACAGGGCCTTTGCTCTCTCTCTCCTCCAGGAAAAGC +
Preference number: 1 (lower is better)
Translates to: PPSPAPSPSTGAVRS*VETGPLLSLSSRKS
Trigger: GCTTTTCCTGGAGGAGAGAGAGAGCAAAGGCCCTGTCTCTACCCAAGACCTAACGGCCCCTGTTGAAGGAGAGGGAGCAGGAGAGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 90 bp GACAGAACTAATCTAAAGAGCATCAGGGCAGCTCCCACCAGAAGGTaGCCTTGTGTGCCGAGACAGCTGCCACCCGCGCAGGGCACCTTT +
Preference number: 1 (lower is better)
Translates to: DRTNLKSIRAAPTRR*PCVPRQLPPAQGTF
Trigger: AAAGGTGCCCTGCGCGGGTGGCAGCTGTCTCGGCACACAAGGTCACCTTCTGGTGGGAGCTGCCCTGATGCTCTTTAGATTAGTTCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 90 bp TTAGGGAAATATGCGGGTGAAGGGGTCCTGTGCCTGGTAGAGAGCTaGCTGGGCTTCCCCGGGAGGAAGATGGCAAAGCAAGGAGTACTG +
Preference number: 1 (lower is better)
Translates to: LGKYAGEGVLCLVES*LGFPGRKMAKQGVL
Trigger: CAGTACTCCTTGCTTTGCCATCTTCCTCCCGGGGAAGCCCAGGCAGCTCTCTACCAGGCACAGGACCCCTTCACCCGCATATTTCCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR CCA 90 bp TGCTGGATGTTCACTCTGACCGTGGCGCTTCTAGCTGGCTGCCTGTaGCCCGAATCTTTCTCACTGGCCATCTCCTCGGATCTGGGAAAG +
Preference number: 1 (lower is better)
Translates to: CWMFTLTVALLAGCL*PESFSLAISSDLGK
Trigger: CTTTCCCAGATCCGAGGAGATGGCCAGTGAGAAAGATTCGGGCCACAGGCAGCCAGCTAGAAGCGCCACGGTCAGAGTGAACATCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 90 bp AATCCCTTCCTTCCCTTTGCAGCTCAGGCTCCCGGAACAGGTGAGTaGCAGACGATGGGCTGTGCTGTGCTGGATGTTCACTCTGACCGT +
Preference number: 1 (lower is better)
Translates to: NPFLPFAAQAPGTGE*QTMGCAVLDVHSDR
Trigger: ACGGTCAGAGTGAACATCCAGCACAGCACAGCCCATCGTCTGTCACTCACCTGTTCCGGGAGCCTGAGCTGCAAAGGGAAGGAAGGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 90 bp AGGCATTGGAGTAACAGGGTCAGGGTTGATCTTGGACACAGCTGGTaGGATTTCCTTGGTCACAGCAGTGGGGTCCGGAGGAGCCAGGTC +
Preference number: 1 (lower is better)
Translates to: RHWSNRVRVDLGHSW*DFLGHSSGVRRSQV
Trigger: GACCTGGCTCCTCCGGACCCCACTGCTGTGACCAAGGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp CTGTCCCTTTCATCAACAGTCCTGGAGTGGGAAGCTCCTCCACCTTaGCGCCTCCCCCTCCACACCCAAATCTCACTCCAGTCTCTGAAT +
Preference number: 1 (lower is better)
Translates to: LSLSSTVLEWEAPPP*RLPLHTQISLQSLN
Trigger: ATTCAGAGACTGGAGTGAGATTTGGGTGTGGAGGGGGAGGCGCCAAGGTGGAGGAGCTTCCCACTCCAGGACTGTTGATGAAAGGGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp AGCCTGAGGGAGGAAGGGCTGCTTAGAAGAGCAACCCTTAGCACCTaGGTCACGTGCATCCCAAGGGTACCAAGGTCTCCCTTGGAACTT +
Preference number: 1 (lower is better)
Translates to: SLREEGLLRRATLST*VTCIPRVPRSPLEL
Trigger: AAGTTCCAAGGGAGACCTTGGTACCCTTGGGATGCACGTGACCCAGGTGCTAAGGGTTGCTCTTCTAAGCAGCCCTTCCTCCCTCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 90 bp TCTCCCCAGATTCACATCCCTAGTGACAGGAGCAGGCTGCTACCCTaGGGTCATGACGCACTTTCCCTAGCATCATGTGGTACCCTGTCT +
Preference number: 1 (lower is better)
Translates to: SPQIHIPSDRSRLLP*GHDALSLASCGTLS
Trigger: AGACAGGGTACCACATGATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGCAGCCTGCTCCTGTCACTAGGGATGTGAATCTGGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 90 bp ATTTTGCAGAAGGCTGGGTCAAGGCCACCCGGTGGTGTATTCGCATaGGTATGTAGCATCACACAGCACAGTGGGGCTCCCTCAACTTCC +
Preference number: 1 (lower is better)
Translates to: ILQKAGSRPPGGVFA*VCSITQHSGAPSTS
Trigger: GGAAGTTGAGGGAGCCCCACTGTGCTGTGTGATGCTACATACGCATGCGAATACACCACCGGGTGGCCTTGACCCAGCCTTCTGCAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 90 bp GGCCTGATGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTaGACCCCACTCAAAAGGAGGGTCTTTGGCCCTTGCCAAGGTGCA +
Preference number: 1 (lower is better)
Translates to: GLMHAILPLYQGKTF*TPLKRRVFGPCQGA
Trigger: TGCACCTTGGCAAGGGCCAAAGACCCTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCATCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 90 bp CTGCAGGGGCTCACCCTGATTCCCAGGGCATCGAAGGCTGAGTTCTaGGCCACTTCCAACTCACTTCCTTTGTTGCCTGTGCTTTTGACA +
Preference number: 1 (lower is better)
Translates to: LQGLTLIPRASKAEF*ATSNSLPLLPVLLT
Trigger: TGTCAAAAGCACAGGCAACAAAGGAAGTGAGTTGGAAGTGGCTCAGAACTCAGCCTTCGATGCCCTGGGAATCAGGGTGAGCCCCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 90 bp TATGTACCTGCAGGGGCTCACCCTGATTCCCAGGGCATCGAAGGCTaGGTTCTGAGCCACTTCCAACTCACTTCCTTTGTTGCCTGTGCT +
Preference number: 1 (lower is better)
Translates to: YVPAGAHPDSQGIEG*VLSHFQLTSFVACA
Trigger: AGCACAGGCAACAAAGGAAGTGAGTTGGAAGTGGCTCAGAACTCAGCCTTCGATGCCCTGGGAATCAGGGTGAGCCCCTGCAGGTACATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 90 bp TTCCTTCTCGGGGAGAGGAGTAGCTGGGAGGCATCCTGCCCCATCTaGTGGCTGAACTGGTGCTTCTTCCTAGAACCTGATGCTCACTAT +
Preference number: 1 (lower is better)
Translates to: FLLGERSSWEASCPI*WLNWCFFLEPDAHY
Trigger: ATAGTGAGCATCAGGTTCTAGGAAGAAGCACCAGTTCAGCCATCAGATGGGGCAGGATGCCTCCCAGCTACTCCTCTCCCCGAGAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 90 bp CCAGGTCTGACCCACGGCGGTTGGAACCCCAGCTGTATCAGTCCCTaGCCTCCCAACATTGTCAGGAAAACCCATATTTATGACCACAGG +
Preference number: 1 (lower is better)
Translates to: PGLTHGGWNPSCISP*PPNIVRKTHIYDHR
Trigger: CCTGTGGTCATAAATATGGGTTTTCCTGACAATGTTGGGAGGTCAGGGACTGATACAGCTGGGGTTCCAACCGCCGTGGGTCAGACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 90 bp ACCAAAATACCCCCGAGTCCAGGAATTGCTGTAAACAAACCCAGATaGAGGATCAACCCTTCTCAGCGGCAGTCGGAGCTGACGGCAGTC +
Preference number: 1 (lower is better)
Translates to: TKIPPSPGIAVNKPR*RINPSQRQSELTAV
Trigger: GACTGCCGTCAGCTCCGACTGCCGCTGAGAAGGGTTGATCCTGCATCTGGGTTTGTTTACAGCAATTCCTGGACTCGGGGGTATTTTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 90 bp GAGGAAGGGCTGCTTAGAAGAGCAACCCTTAGCACCTGGGTCACGTaGATCCCAAGGGTACCAAGGTCTCCCTTGGAACTTACAGAGAAC +
Preference number: 1 (lower is better)
Translates to: EEGLLRRATLSTWVT*IPRVPRSPLELTEN
Trigger: GTTCTCTGTAAGTTCCAAGGGAGACCTTGGTACCCTTGGGATGCACGTGACCCAGGTGCTAAGGGTTGCTCTTCTAAGCAGCCCTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp GACTCCAAAGTTGGCCATCTTGCCCCTTGGTCCCTGCTTCCCTATTaGGACATGATCTATTCCTCACCCTCCAGATCACCCCACTTGGCT +
Preference number: 1 (lower is better)
Translates to: DSKVGHLAPWSLLPY*DMIYSSPSRSPHLA
Trigger: AGCCAAGTGGGGTGATCTGGAGGGTGAGGAATAGATCATGTCCCAATAGGGAAGCAGGGACCAAGGGGCAAGATGGCCAACTTTGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR CCA 90 bp GGGTATCAGTCCACAGGTGACTCCAAAGTTGGCCATCTTGCCCCTTaGTCCCTGCTTCCCTATTGGGACATGATCTATTCCTCACCCTCC +
Preference number: 1 (lower is better)
Translates to: GYQSTGDSKVGHLAP*SLLPYWDMIYSSPS
Trigger: GGAGGGTGAGGAATAGATCATGTCCCAATAGGGAAGCAGGGACCAAGGGGCAAGATGGCCAACTTTGGAGTCACCTGTGGACTGATACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR CCA 90 bp TTCCCCCGTTCCACTGGCCCATCCAGACACAACTCCTCACTGTGTTaGACCATTCTGGCAGCTGCGTCTTGGAGTGACCTTTCTTTTGAC +
Preference number: 1 (lower is better)
Translates to: FPRSTGPSRHNSSLC*TILAAASWSDLSFD
Trigger: GTCAAAAGAAAGGTCACTCCAAGACGCAGCTGCCAGAATGGTCCAACACAGTGAGGAGTTGTGTCTGGATGGGCCAGTGGAACGGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp GGCACCTGGCATATGGTAAGTATTCAGCGATTATTGCAATCCCTGTaGTTCCAACCTCCTGAGATTAGCCTCCGAGGGGGTGTGCCCGGA +
Preference number: 1 (lower is better)
Translates to: GTWHMVSIQRLLQSL*FQPPEISLRGGVPG
Trigger: TCCGGGCACACCCCCTCGGAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACTTACCATATGCCAGGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp CTGGCTCTGAATAGGAAGGGGTTCTGCTTCGGAAATATTCCTCAGTaGGGGTCTCCCAAGGCAAATTCCTGGCCCTGCAGCTTCCTTGCT +
Preference number: 1 (lower is better)
Translates to: LALNRKGFCFGNIPQ*GSPKANSWPCSFLA
Trigger: AGCAAGGAAGCTGCAGGGCCAGGAATTTGCCTTGGGAGACCCCCACTGAGGAATATTTCCGAAGCAGAACCCCTTCCTATTCAGAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 90 bp CTCTCGTCAATTCTCTGCTACTTATGTACCTGCAGGGGCTCACCCTaGTTCCCAGGGCATCGAAGGCTGAGTTCTGAGCCACTTCCAACT +
Preference number: 1 (lower is better)
Translates to: LSSILCYLCTCRGSP*FPGHRRLSSEPLPT
Trigger: AGTTGGAAGTGGCTCAGAACTCAGCCTTCGATGCCCTGGGAATCAGGGTGAGCCCCTGCAGGTACATAAGTAGCAGAGAATTGACGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 90 bp GTTCCCACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTaGACTCTCGTCAATTCTCTGCTACTTATGTACCTGCAGGGGCTC +
Preference number: 1 (lower is better)
Translates to: VPTMTAHLTLRPSSE*TLVNSLLLMYLQGL
Trigger: GAGCCCCTGCAGGTACATAAGTAGCAGAGAATTGACGAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGTGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 90 bp AGCTATGTCCCAAATGTCAGAGGGAAGGCACCTGGCTCTGGAGTTTaGAGCAACACCCTGTGGTTGTCCAGTGTTAAGACTCTGGCTCTG +
Preference number: 1 (lower is better)
Translates to: SYVPNVRGKAPGSGV*SNTLWLSSVKTLAL
Trigger: CAGAGCCAGAGTCTTAACACTGGACAACCACAGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCTTCCCTCTGACATTTGGGACATAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp TGCCTCAACCTCCACTTATATCAACCTTCACTTCCCCCGTTCCACTaGCCCATCCAGACACAACTCCTCACTGTGTTGGACCATTCTGGC +
Preference number: 1 (lower is better)
Translates to: CLNLHLYQPSLPPFH*PIQTQLLTVLDHSG
Trigger: GCCAGAATGGTCCAACACAGTGAGGAGTTGTGTCTGGATGGGCCAGTGGAACGGGGGAAGTGAAGGTTGATATAAGTGGAGGTTGAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp CTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGGAGGGTCTTTaGCCCTTGCCAAGGTGCATCTGTAACTCAGATCCAAGGGATGGA +
Preference number: 1 (lower is better)
Translates to: LPGKDVLHPTQKEGL*PLPRCICNSDPRDG
Trigger: TCCATCCCTTGGATCTGAGTTACAGATGCACCTTGGCAAGGGCCAAAGACCCTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 90 bp CTGCTCAAGAACCTGCTGTGGCTGGACTGTACATCACGCCTAAACTaGCTCAACCTCCACTTATATCAACCTTCACTTCCCCCGTTCCAC +
Preference number: 1 (lower is better)
Translates to: LLKNLLWLDCTSRLN*LNLHLYQPSLPPFH
Trigger: GTGGAACGGGGGAAGTGAAGGTTGATATAAGTGGAGGTTGAGGCAGTTTAGGCGTGATGTACAGTCCAGCCACAGCAGGTTCTTGAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp GAGCAAGAGCTCATTTGCACAGAGAAAACCAGAGTTGGCTGTGCCTaGGGGTACATGAGCACTCTAAGACCCTCACGTTCCCACTATGAC +
Preference number: 1 (lower is better)
Translates to: EQELICTEKTRVGCA*GYMSTLRPSRSHYD
Trigger: GTCATAGTGGGAACGTGAGGGTCTTAGAGTGCTCATGTACCCCCAGGCACAGCCAACTCTGGTTTTCTCTGTGCAAATGAGCTCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp CCACTGGCCCATCCAGACACAACTCCTCACTGTGTTGGACCATTCTaGCAGCTGCGTCTTGGAGTGACCTTTCTTTTGACCTCTGTCATT +
Preference number: 1 (lower is better)
Translates to: PLAHPDTTPHCVGPF*QLRLGVTFLLTSVI
Trigger: AATGACAGAGGTCAAAAGAAAGGTCACTCCAAGACGCAGCTGCCAGAATGGTCCAACACAGTGAGGAGTTGTGTCTGGATGGGCCAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp AATCCCAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTaGAATCTTCTGGGAATCACCTCTGGGAATCAGTTTCCTCACTCA +
Preference number: 1 (lower is better)
Translates to: NPRRWEGRTTDRWPG*NLLGITSGNQFPHS
Trigger: TGAGTGAGGAAACTGATTCCCAGAGGTGATTCCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTGGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp GTCTACAGCAGACCCTCTCTCTGCAGACATCAGGGCAGTTTGTTATaGGGGAAGAGTCAAGTGAGGATTTCCATGTCTGGAGGAATCTCC +
Preference number: 1 (lower is better)
Translates to: VYSRPSLCRHQGSLL*GKSQVRISMSGGIS
Trigger: GGAGATTCCTCCAGACATGGAAATCCTCACTTGACTCTTCCCCCATAACAAACTGCCCTGATGTCTGCAGAGAGAGGGTCTGCTGTAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 90 bp TTTGCAGCAACACCCTGTGGTTGTCCAGTGTTAAGACTCTGGCTCTaGATAGGAAGGGGTTCTGCTTCGGAAATATTCCTCAGTGGGGGT +
Preference number: 1 (lower is better)
Translates to: FAATPCGCPVLRLWL*IGRGSASEIFLSGG
Trigger: ACCCCCACTGAGGAATATTTCCGAAGCAGAACCCCTTCCTATTCAGAGCCAGAGTCTTAACACTGGACAACCACAGGGTGTTGCTGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 90 bp GCCCTGAGTGGGTTGCTGGGCCCCTCCAAAGTATTAAATTTCTGCTaGTTCTTGTTATATCAGCTTTCTCAAGGCAGCCTTCATGCTGCG +
Preference number: 1 (lower is better)
Translates to: ALSGLLGPSKVLNFC*FLLYQLSQGSLHAA
Trigger: CGCAGCATGAAGGCTGCCTTGAGAAAGCTGATATAACAAGAAGCAGCAGAAATTTAATACTTTGGAGGGGCCCAGCAACCCACTCAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp GAGCACGGTAGAGGAGACATTGGAAACAGAAAAATCCAAAGCTCATaGCCTTGCTCTGCTCCTTCCTGGCTGTGTTACCCTGAGCAAAGT +
Preference number: 1 (lower is better)
Translates to: EHGRGDIGNRKIQSS*PCSAPSWLCYPEQS
Trigger: ACTTTGCTCAGGGTAACACAGCCAGGAAGGAGCAGAGCAAGGCCATGAGCTTTGGATTTTTCTGTTTCCAATGTCTCCTCTACCGTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp GGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTaGGAATCACCTCTGGGAATCAGTTTCCTCACTCATAAAGTGGAG +
Preference number: 1 (lower is better)
Translates to: GGKEGLQTDGLVGIF*ESPLGISFLTHKVE
Trigger: CTCCACTTTATGAGTGAGGAAACTGATTCCCAGAGGTGATTCCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 90 bp ATCTCCCTGCCTCCTCCTGCCACGTGGACAATTCTGATTTTAATGTaGGCAAGAGCTCATTTGCACAGAGAAAACCAGAGTTGGCTGTGC +
Preference number: 1 (lower is better)
Translates to: ISLPPPATWTILILM*ARAHLHRENQSWLC
Trigger: GCACAGCCAACTCTGGTTTTCTCTGTGCAAATGAGCTCTTGCTCACATTAAAATCAGAATTGTCCACGTGGCAGGAGGAGGCAGGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 90 bp ATGTCCTGCTTTTTCTTAATCCCTGTCTACAGCAGACCCTCTCTCTaGAGACATCAGGGCAGTTTGTTATGGGGGAAGAGTCAAGTGAGG +
Preference number: 1 (lower is better)
Translates to: MSCFFLIPVYSRPSL*RHQGSLLWGKSQVR
Trigger: CCTCACTTGACTCTTCCCCCATAACAAACTGCCCTGATGTCTGCAGAGAGAGGGTCTGCTGTAGACAGGGATTAAGAAAAAGCAGGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp AGACACAACTCCTCACTGTGTTGGACCATTCTGGCAGCTGCGTCTTaGAGTGACCTTTCTTTTGACCTCTGTCATTTTCAAGACAGCCTC +
Preference number: 1 (lower is better)
Translates to: RHNSSLCWTILAAAS*SDLSFDLCHFQDSL
Trigger: GAGGCTGTCTTGAAAATGACAGAGGTCAAAAGAAAGGTCACTCCAAGACGCAGCTGCCAGAATGGTCCAACACAGTGAGGAGTTGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 90 bp AGTCTGTGGAATGGGAGTAATAATTGTACCTGTCTCACAGAGGTGTaGGGATTAGGCAAGACATTGTGTATAAAAAGTTGGGCACGGTGC +
Preference number: 1 (lower is better)
Translates to: SLWNGSNNCTCLTEV*GLGKTLCIKSWARC
Trigger: GCACCGTGCCCAACTTTTTATACACAATGTCTTGCCTAATCCTCACACCTCTGTGAGACAGGTACAATTATTACTCCCATTCCACAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp CTTTATAGCATGGAGGTTAAGATCACAAGCTGGAGCCAGACTTCTTaGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTG +
Preference number: 1 (lower is better)
Translates to: LYSMEVKITSWSQTS*VQILALVYMTSVTL
Trigger: CAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAAGTCTGGCTCCAGCTTGTGATCTTAACCTCCATGCTATAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
3UTR CCA 90 bp CTGGGAATCAGTTTCCTCACTCATAAAGTGGAGAGGATAATGCTTTaGCACCTGGCATATGGTAAGTATTCAGCGATTATTGCAATCCCT +
Preference number: 1 (lower is better)
Translates to: LGISFLTHKVERIML*HLAYGKYSAIIAIP
Trigger: AGGGATTGCAATAATCGCTGAATACTTACCATATGCCAGGTGCCAAAGCATTATCCTCTCCACTTTATGAGTGAGGAAACTGATTCCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 90 bp GGTCATATTATAACTAAAGCGTTTATTTCCATTCAATTCACTAACTaGTTGCTCTGCTTGGGTGTCTGTGTTGGTTCACAGGAGGGAGTC +
Preference number: 1 (lower is better)
Translates to: GHIITKAFISIQFTN*LLCLGVCVGSQEGV
Trigger: GACTCCCTCCTGTGAACCAACACAGACACCCAAGCAGAGCAATCAGTTAGTGAATTGAATGGAAATAAACGCTTTAGTTATAATATGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 90 bp CAATGTTATTACAGGCTTTATAGCATGGAGGTTAAGATCACAAGCTaGAGCCAGACTTCTTGGGTTCAAATCCTGGCTCTAGTATATATG +
Preference number: 1 (lower is better)
Translates to: QCYYRLYSMEVKITS*SQTSWVQILALVYM
Trigger: CATATATACTAGAGCCAGGATTTGAACCCAAGAAGTCTGGCTCCAGCTTGTGATCTTAACCTCCATGCTATAAAGCCTGTAATAACATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
3UTR TCA 90 bp GATGGAATCTTAGAAACATGGAATCATTCCATTGGAATCTTAGAATaGTGGGGTTTTGCAATCCTAGAATCTTGGAATCTTTCACCTGTG +
Preference number: 1 (lower is better)
Translates to: DGILETWNHSIGILE*WGFAILESWNLSPV
Trigger: CACAGGTGAAAGATTCCAAGATTCTAGGATTGCAAAACCCCATCATTCTAAGATTCCAATGGAATGATTCCATGTTTCTAAGATTCCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGGTGGCTGGCACCGCTTaGTTCTTCCCGTGGCCCGTG +
Preference number: 2 (lower is better)
Translates to: GWHRLVLPVARGLLASGWVAGTA*FFPWPV
Trigger: CACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC...CCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
3UTR-3UTR CCA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCACCCCACTTGGCTGGTaGGGCCGGTGGAGAGGGGGT +
Preference number: 2 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGTPLGW*GRWRGG
Trigger: ACCCCCTCTCCACCGGCCCCACCAGCCAAGTGGGGT...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR-3UTR CCA 90 bp GCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCTGCCAGATCACCCCACTTaGCTGGTGGGGCCGGTGGAG +
Preference number: 2 (lower is better)
Translates to: APLGSSRGPWPPGEWLALPDHPT*LVGPVE
Trigger: CTCCACCGGCCCCACCAGCCAAGTGGGGTGATCTGG...CAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR-3UTR CCA 90 bp TTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCTGGCCCGTGGCCTCCTaGCGAGTGGCTGGCCCTGCA +
Preference number: 2 (lower is better)
Translates to: LVTSRGWHRLVLPVARGLWPVAS*RVAGPA
Trigger: TGCAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCA...GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
3UTR-3UTR CCA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAATCACCCCACTTGGCTaGTGGGGCCGGTGGAGAGGG +
Preference number: 2 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRITPLG*WGRWRG
Trigger: CCCTCTCCACCGGCCCCACCAGCCAAGTGGGGTGAT...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR-3UTR TCA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGATCCCCGCGTTCTCCCTaGCCCAGGAGGACAAAAGCC +
Preference number: 2 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRSPRSP*PRRTKA
Trigger: GGCTTTTGTCCTCCTGGGTCAGGGAGAACGCGGGGA...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000374632.7
3UTR-3UTR TCA 90 bp GCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCTGGAGGGGGTGCTAAGGTaGCAAGCAGAAGTGGCTGGG +
Preference number: 2 (lower is better)
Translates to: APLGSSRGPWPPGEWLALEGVLR*QAEVAG
Trigger: CCCAGCCACTTCTGCTTGTCACCTTAGCACCCCCTC...CAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR-3UTR CCA 90 bp TTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCTCTTCCCGTGGCCCGTaGCCTCCTGGCGAGTGGCTG +
Preference number: 2 (lower is better)
Translates to: LVTSRGWHRLVLPVARGLSSRGP*PPGEWL
Trigger: CAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGA...GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
3UTR-3UTR CCA 90 bp CTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTGGCTGGTGGGGCCGGTaGAGAGGGGGTGCTAAGGTG +
Preference number: 2 (lower is better)
Translates to: LGDVSWLAPLGSSRGPWPGWWGR*RGGAKV
Trigger: CACCTTAGCACCCCCTCTCCACCGGCCCCACCAGCC...AGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR-3UTR CCA 90 bp TGGCGAGTGGCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGCTGGAGCTGCAGACCTaGGGGTTGCCCATCCTCAGG +
Preference number: 2 (lower is better)
Translates to: WRVAGPAVDRAPGGPARGLELQT*GLPILR
Trigger: CCTGAGGATGGGCAACCCCCAGGTCTGCAGCTCCAG...CCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGCCACTCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
3UTR CAA 90 bp GGTGACCTTGTGTGCCGAGACAGCTGCCACCCGCGCAGGGCACCTTaGGGGCACAAAGTGAAGGCCAGTGGGCCACTGCCGGCCAGTTTG +
Preference number: 2 (lower is better)
Translates to: GDLVCRDSCHPRRAP*GHKVKASGPLPASL
Trigger: CAAACTGGCCGGCAGTGGCCCACTGGCCTTCACTTTGTGCCCCAAAGGTGCCCTGCGCGGGTGGCAGCTGTCTCGGCACACAAGGTCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp GCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCTGGGAGCGACTATGGTGTaGGGTGGAAGAGCACTTGAG +
Preference number: 2 (lower is better)
Translates to: APLGSSRGPWPPGEWLALGATMV*GGRALE
Trigger: CTCAAGTGCTCTTCCACCTCACACCATAGTCGCTCC...CAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR-3UTR TCA 90 bp TGGCGAGTGGCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGAGGGAAATATGCGGGTaGAGGGGTCCTGTGCCTGGT +
Preference number: 2 (lower is better)
Translates to: WRVAGPAVDRAPGGPARGREICG*RGPVPG
Trigger: ACCAGGCACAGGACCCCTTCACCCGCATATTTCCCT...CCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGCCACTCGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR-3UTR GCA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGCTGACGGCAGTCACTaGAGTATCAGTCCTCGAGGC +
Preference number: 2 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRADGSH*SISPRG
Trigger: GCCTCGAGGACTGATACTGCAGTGACTGCCGTCAGC...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
3UTR-3UTR CCA 90 bp GGCCGCTCCGGGGGCAATTCCTTCTCGGGGAGAGGAGTAGCTGGGAGGCATCCTACTGCCAGCCCCATGTaGGGCCCCAGAACAGTTGGG +
Preference number: 2 (lower is better)
Translates to: GRSGGNSFSGRGVAGRHPTASPM*GPRTVG
Trigger: CCCAACTGTTCTGGGGCCCCACATGGGGCTGGCAGT...AGGATGCCTCCCAGCTACTCCTCTCCCCGAGAAGGAATTGCCCCCGGAGCGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGATGCATGTTTTCTTGGTaGCGTCTCGTGGCTGGCACC +
Preference number: 2 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRCMFSW*RLVAGT
Trigger: GGTGCCAGCCACGAGACGTCACCAAGAAAACATGCA...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
3UTR-3UTR TCA 90 bp TGGCGAGTGGCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGTGCATGTTTTCTTGGTaGCGTCTCGTGGCTGGCACC +
Preference number: 2 (lower is better)
Translates to: WRVAGPAVDRAPGGPARGCMFSW*RLVAGT
Trigger: GGTGCCAGCCACGAGACGTCACCAAGAAAACATGCA...CCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGCCACTCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
3UTR-3UTR TCA 90 bp TGCCCCCTGCCCATCAGAGTCCCTCTCCACAGAGGGGAAAGCGGCCAGGCTGATCATCCTCAGGAAGGCTaGCCTTTCTGGGGTCCCCGC +
Preference number: 2 (lower is better)
Translates to: CPLPIRVPLHRGESGQADHPQEG*PFWGPR
Trigger: GCGGGGACCCCAGAAAGGTCAGCCTTCCTGAGGATG...ATCAGCCTGGCCGCTTTCCCCTCTGTGGAGAGGGACTCTGATGGGCAGGGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp GGCCGCTCCGGGGGCAATTCCTTCTCGGGGAGAGGAGTAGCTGGGAGGCATCCTGCCAGGCTGTGCGCGTaGTATGTACCTGGAGCTGCA +
Preference number: 2 (lower is better)
Translates to: GRSGGNSFSGRGVAGRHPARLCA*YVPGAA
Trigger: TGCAGCTCCAGGTACATATCACGCGCACAGCCTGGC...AGGATGCCTCCCAGCTACTCCTCTCCCCGAGAAGGAATTGCCCCCGGAGCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp TGCCCCCTGCCCATCAGAGTCCCTCTCCACAGAGGGGAAAGCGGCCAGGCTGATGGCTCCCGGAACAGGTaGGTGACAGACGATGGGCTG +
Preference number: 2 (lower is better)
Translates to: CPLPIRVPLHRGESGQADGSRNR*VTDDGL
Trigger: CAGCCCATCGTCTGTCACTCACCTGTTCCGGGAGCC...ATCAGCCTGGCCGCTTTCCCCTCTGTGGAGAGGGACTCTGATGGGCAGGGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGTGTGCCGAGACAGCTaGCACCCGCGCAGGGCACCT +
Preference number: 2 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGVCRDS*HPRRAP
Trigger: AGGTGCCCTGCGCGGGTGGCAGCTGTCTCGGCACAC...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp TGCCCCCTGCCCATCAGAGTCCCTCTCCACAGAGGGGAAAGCGGCCAGGCTGATCTGAGCAATTTCTCATaGCCACCCGCACGCCCGCCC +
Preference number: 2 (lower is better)
Translates to: CPLPIRVPLHRGESGQADLSNFS*PPARPP
Trigger: GGGCGGGCGTGCGGGTGGGCATGAGAAATTGCTCAG...ATCAGCCTGGCCGCTTTCCCCTCTGTGGAGAGGGACTCTGATGGGCAGGGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp TGGCCCTGCAGCTTCCTTGCTGCAGGGAGGGAAATTCCACCCCAGATGAGTCCCTGGGCAGGCGGGGGCTaGCACTTGGGGAGGTTGAGC +
Preference number: 2 (lower is better)
Translates to: WPCSFLAAGREIPPQMSPWAGGG*HLGRLS
Trigger: GCTCAACCTCCCCAAGTGCCAGCCCCCGCCTGCCCA...GGGACTCATCTGGGGTGGAATTTCCCTCCCTGCAGCAAGGAAGCTGCAGGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp AGCCCTGAGTCCCTTAAGTGTCTCCTACTGCCCCGCCACCCGGGTCCCTGCTCTGAAGGTGACCTTGTGTaGCGAGACAGCTGCCACCCG +
Preference number: 2 (lower is better)
Translates to: SPESLKCLLLPRHPGPCSEGDLV*RDSCHP
Trigger: CGGGTGGCAGCTGTCTCGGCACACAAGGTCACCTTC...AGAGCAGGGACCCGGGTGGCGGGGCAGTAGGAGACACTTAAGGGACTCAGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp TGCCCCCTGCCCATCAGAGTCCCTCTCCACAGAGGGGAAAGCGGCCAGGCTGATGCCTCCGAGGGGGTGTaGCCGGAGTTGACTCTCTTT +
Preference number: 2 (lower is better)
Translates to: CPLPIRVPLHRGESGQADASEGV*PELTLF
Trigger: AAAGAGAGTCAACTCCGGGCACACCCCCTCGGAGGC...ATCAGCCTGGCCGCTTTCCCCTCTGTGGAGAGGGACTCTGATGGGCAGGGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GCACGTGTGTTAGGGAAATATGCGGGTGAAGGGGTCCTGTGCCTGGTAGAGAGCTGGCCCGTGGCCTCCTaGCGAGTGGCTGGCCCTGCA +
Preference number: 2 (lower is better)
Translates to: ARVLGKYAGEGVLCLVESWPVAS*RVAGPA
Trigger: TGCAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCA...GCTCTCTACCAGGCACAGGACCCCTTCACCCGCATATTTCCCTAACACACGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR-3UTR CCA 90 bp TTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCGGCCATCTTGCCCCTTaGTCCCTGCTTCCCTATTGG +
Preference number: 2 (lower is better)
Translates to: LVTSRGWHRLVLPVARGLGHLAP*SLLPYW
Trigger: CCAATAGGGAAGCAGGGACCAAGGGGCAAGATGGCC...GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR-3UTR CCA 90 bp CAGCTGGTGAGATTTCCTTGGTCACAGCAGTGGGGTCCGGAGGAGCCAGGTCTGGGCTTTGGTGAGGCCTaGTGGCAGGTGGGAGGAGGG +
Preference number: 2 (lower is better)
Translates to: QLVRFPWSQQWGPEEPGLGFGEA*WQVGGG
Trigger: CCCTCCTCCCACCTGCCACCAGGCCTCACCAAAGCC...CAGACCTGGCTCCTCCGGACCCCACTGCTGTGACCAAGGAAATCTCACCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp CAGCTGGTGAGATTTCCTTGGTCACAGCAGTGGGGTCCGGAGGAGCCAGGTCTGGGCACCTCTGCCGTGTaGCCTCCCAGCTCTGGAAGG +
Preference number: 2 (lower is better)
Translates to: QLVRFPWSQQWGPEEPGLGTSAV*PPSSGR
Trigger: CCTTCCAGAGCTGGGAGGCCACACGGCAGAGGTGCC...CAGACCTGGCTCCTCCGGACCCCACTGCTGTGACCAAGGAAATCTCACCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CAA 90 bp TTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTaGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCC +
Preference number: 2 (lower is better)
Translates to: FELHVFLVTSRGWHR*VLPVARGLLASGWP
Trigger: GGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
3UTR-3UTR TCA 90 bp TGCCCCCTGCCCATCAGAGTCCCTCTCCACAGAGGGGAAAGCGGCCAGGCTGATTTCTCCTGGAATAAATaGGGGCCGCTCCGGGGGCAA +
Preference number: 2 (lower is better)
Translates to: CPLPIRVPLHRGESGQADFSWNK*GPLRGQ
Trigger: TTGCCCCCGGAGCGGCCCTCATTTATTCCAGGAGAA...ATCAGCCTGGCCGCTTTCCCCTCTGTGGAGAGGGACTCTGATGGGCAGGGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp TGCCCCCTGCCCATCAGAGTCCCTCTCCACAGAGGGGAAAGCGGCCAGGCTGATTCCCTTCCTTCCCTTTaGAGCTCAGGCTCCCGGAAC +
Preference number: 2 (lower is better)
Translates to: CPLPIRVPLHRGESGQADSLPSL*SSGSRN
Trigger: GTTCCGGGAGCCTGAGCTGCAAAGGGAAGGAAGGGA...ATCAGCCTGGCCGCTTTCCCCTCTGTGGAGAGGGACTCTGATGGGCAGGGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GCCAGGAAAGGATTAGTAACCAGGCAGCGGGTGGCTCAGAGCTGTGTGCCTGGGTGGCTGGCCCTGCAGTaGATAGAGCACCAGGAGGGC +
Preference number: 2 (lower is better)
Translates to: ARKGLVTRQRVAQSCVPGWLALQ*IEHQEG
Trigger: GCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGCCA...CCCAGGCACACAGCTCTGAGCCACCCGCTGCCTGGTTACTAATCCTTTCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
3UTR-3UTR CCA 90 bp GTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTGTGGCTGGCACCGCTTaGTTCTTCCCGTGGCCCGTG +
Preference number: 2 (lower is better)
Translates to: VSLSAPSGGQGITVNDPGVAGTA*FFPWPV
Trigger: CACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC...ACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
3UTR-3UTR CCA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACGCCTCCGATGCAGCCTaGTTTAGGCTCCCAGAGGGA +
Preference number: 2 (lower is better)
Translates to: RGMLARVSERTLWRAGYHASDAA*FRLPEG
Trigger: TCCCTCTGGGAGCCTAAACCAGGCTGCATCGGAGGC...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAAGCGGCAGTCGGAGCTaGCGGCAGTCACTGCAGTAT +
Preference number: 2 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGSGSRS*RQSLQY
Trigger: ATACTGCAGTGACTGCCGTCAGCTCCGACTGCCGCT...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGGCAGGGTATCACAGTaGATGATCCGGGTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGGRVSQ*MIRVLA
Trigger: GGCCAGGACCCGGATCATTCACTGTGATACCCTGCC...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp GAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTGGGGTGGAAGAGATGTaGGCAGCGCCTGTACCCCTG +
Preference number: 2 (lower is better)
Translates to: ESSGLHSSGWGRHFRRRSGVEEM*AAPVPL
Trigger: CAGGGGTACAGGCGCTGCTCACATCTCTTCCACCCC...ACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAAGCTGTGTGCCTGGGTaGGCGGGTGGTGTAAGTGGA +
Preference number: 2 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGSCVPG*AGGVSG
Trigger: TCCACTTACACCACCCGCTCACCCAGGCACACAGCT...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp CAGCTGGTGAGATTTCCTTGGTCACAGCAGTGGGGTCCGGAGGAGCCAGGTCTGTCTCCAGGACTAGGGTaGCCAGGGCAGGGATGGGTT +
Preference number: 2 (lower is better)
Translates to: QLVRFPWSQQWGPEEPGLSPGLG*PGQGWV
Trigger: AACCCATCCCTGCCCTGGTCACCCTAGTCCTGGAGA...CAGACCTGGCTCCTCCGGACCCCACTGCTGTGACCAAGGAAATCTCACCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp TGCCCCCTGCCCATCAGAGTCCCTCTCCACAGAGGGGAAAGCGGCCAGGCTGATTGGCCAGGTGTTGAGTaGACAGGTCTGGACCATAGC +
Preference number: 2 (lower is better)
Translates to: CPLPIRVPLHRGESGQADWPGVE*TGLDHS
Trigger: GCTATGGTCCAGACCTGTTCACTCAACACCTGGCCA...ATCAGCCTGGCCGCTTTCCCCTCTGTGGAGAGGGACTCTGATGGGCAGGGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp GCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCTGGTAAACAAACCCAGATaGAGGATCAACCCTTCTCAG +
Preference number: 2 (lower is better)
Translates to: APLGSSRGPWPPGEWLALVNKPR*RINPSQ
Trigger: CTGAGAAGGGTTGATCCTGCATCTGGGTTTGTTTAC...CAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
3UTR-3UTR GCA 90 bp GGCCGCTCCGGGGGCAATTCCTTCTCGGGGAGAGGAGTAGCTGGGAGGCATCCTTGTGAGGCTAGCAACTaGTCACAAGGTGGTGGCAGA +
Preference number: 2 (lower is better)
Translates to: GRSGGNSFSGRGVAGRHPCEASN*SQGGGR
Trigger: TCTGCCACCACCTTGTGAGCAGTTGCTAGCCTCACA...AGGATGCCTCCCAGCTACTCCTCTCCCCGAGAAGGAATTGCCCCCGGAGCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp GGCCGCTCCGGGGGCAATTCCTTCTCGGGGAGAGGAGTAGCTGGGAGGCATCCTGTGTTTTGCACAGCCTaGCTCACCCAGTCCAATGCT +
Preference number: 2 (lower is better)
Translates to: GRSGGNSFSGRGVAGRHPVFCTA*LTQSNA
Trigger: AGCATTGGACTGGGTGAGGCAGGCTGTGCAAAACAC...AGGATGCCTCCCAGCTACTCCTCTCCCCGAGAAGGAATTGCCCCCGGAGCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp AGGCACCTGGCTCTGGAGTTTGCAGCAACACCCTGTGGTTGTCCAGTGTTAAGATGGCCCGTGGCCTCCTaGCGAGTGGCTGGCCCTGCA +
Preference number: 2 (lower is better)
Translates to: RHLALEFAATPCGCPVLRWPVAS*RVAGPA
Trigger: TGCAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCA...TCTTAACACTGGACAACCACAGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
3UTR-3UTR CCA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTTCTTCCCGTGGCCCGTaGCCTCCTGGCGAGTGGCTG +
Preference number: 2 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGSSRGP*PPGEWL
Trigger: CAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGA...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374630.8
3UTR-3UTR CCA 90 bp GCAGCTGGTCCCCATTTCCACGGTGCCCTGGCCTGTGTTTACAAGGCAGCTTTCCTGGAGCTGCAGACCTaGGGGTTGCCCATCCTCAGG +
Preference number: 2 (lower is better)
Translates to: AAGPHFHGALACVYKAAFLELQT*GLPILR
Trigger: CCTGAGGATGGGCAACCCCCAGGTCTGCAGCTCCAG...GAAAGCTGCCTTGTAAACACAGGCCAGGGCACCGTGGAAATGGGGACCAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp ACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCGTCAATAGGGGCTGGCGGGAGTaGGCACCAGGAGGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: TMTAHLTLRPSSECTLVNRGWRE*APGGPG
Trigger: GCCTGGCCCTCCTGGTGCCCACTCCCGCCAGCCCCT...ATTGACGAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp CTCCCGGAACAGGTGAGTGACAGACGATGGGCTGTGCTGTGCTGGATGTTCACTGGCTTTGGTGAGGCCTaGTGGCAGGTGGGAGGAGGG +
Preference number: 2 (lower is better)
Translates to: LPEQVSDRRWAVLCWMFTGFGEA*WQVGGG
Trigger: CCCTCCTCCCACCTGCCACCAGGCCTCACCAAAGCC...AGTGAACATCCAGCACAGCACAGCCCATCGTCTGTCACTCACCTGTTCCGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GGAAACAGGGTTCTGGGAAACCCTGCCAGACAGCCCCATACCCTGGTTGAGAGCGCCCAGATGGCCCCATaGCAGTGGGCTTTGGTGAGG +
Preference number: 2 (lower is better)
Translates to: GNRVLGNPARQPHTLVESAQMAP*QWALVR
Trigger: CCTCACCAAAGCCCACTGCCATGGGGCCATCTGGGC...GCTCTCAACCAGGGTATGGGGCTGTCTGGCAGGGTTTCCCAGAACCCTGTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACTCTGAATGGCCCAGATaGCCCCATGGCAGTGGGCTT +
Preference number: 2 (lower is better)
Translates to: RGMLARVSERTLWRAGYHSEWPR*PHGSGL
Trigger: AAGCCCACTGCCATGGGGCCATCTGGGCCATTCAGA...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGACTGAGGGCGTCCCCATaGCCAAGACCTTTAGGCCCA +
Preference number: 2 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGLRASP*PRPLGP
Trigger: TGGGCCTAAAGGTCTTGGCCATGGGGACGCCCTCAG...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp TGCCCCCTGCCCATCAGAGTCCCTCTCCACAGAGGGGAAAGCGGCCAGGCTGATGCCAGAAAGGCCACGTaGAGCTGTCGTTCTCCATGT +
Preference number: 2 (lower is better)
Translates to: CPLPIRVPLHRGESGQADARKAT*SCRSPC
Trigger: ACATGGAGAACGACAGCTCCACGTGGCCTTTCTGGC...ATCAGCCTGGCCGCTTTCCCCTCTGTGGAGAGGGACTCTGATGGGCAGGGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp AGCCCTGAGTCCCTTAAGTGTCTCCTACTGCCCCGCCACCCGGGTCCCTGCTCTCCATCTCCTCGGATCTaGGAAAGGTCCCGAGAGGTA +
Preference number: 2 (lower is better)
Translates to: SPESLKCLLLPRHPGPCSPSPRI*ERSREV
Trigger: TACCTCTCGGGACCTTTCCCAGATCCGAGGAGATGG...AGAGCAGGGACCCGGGTGGCGGGGCAGTAGGAGACACTTAAGGGACTCAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GGAAACAGGGTTCTGGGAAACCCTGCCAGACAGCCCCATACCCTGGTTGAGAGCCGTGGCGCTTCTAGCTaGCTGCCTGTGGCCCGAATC +
Preference number: 2 (lower is better)
Translates to: GNRVLGNPARQPHTLVESRGASS*LPVARI
Trigger: GATTCGGGCCACAGGCAGCCAGCTAGAAGCGCCACG...GCTCTCAACCAGGGTATGGGGCTGTCTGGCAGGGTTTCCCAGAACCCTGTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GGCCGCTCCGGGGGCAATTCCTTCTCGGGGAGAGGAGTAGCTGGGAGGCATCCTTGTGTTGGACCATTCTaGCAGCTGCGTCTTGGAGTG +
Preference number: 2 (lower is better)
Translates to: GRSGGNSFSGRGVAGRHPCVGPF*QLRLGV
Trigger: CACTCCAAGACGCAGCTGCCAGAATGGTCCAACACA...AGGATGCCTCCCAGCTACTCCTCTCCCCGAGAAGGAATTGCCCCCGGAGCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp AGGCACCTGGCTCTGGAGTTTGCAGCAACACCCTGTGGTTGTCCAGTGTTAAGAGCTTGCCCGTGTCTCTaGGCGCACCCTCTGGAGGGC +
Preference number: 2 (lower is better)
Translates to: RHLALEFAATPCGCPVLRACPCL*AHPLEG
Trigger: GCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGC...TCTTAACACTGGACAACCACAGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp AGGAGCAGGCTGCTACCCTGCGGTCATGACGCACTTTCCCTAGCATCATGTGGTTGCAGGGGCTCACCCTaGTTCCCAGGGCATCGAAGG +
Preference number: 2 (lower is better)
Translates to: RSRLLPCGHDALSLASCGCRGSP*FPGHRR
Trigger: CCTTCGATGCCCTGGGAATCAGGGTGAGCCCCTGCA...ACCACATGATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGCAGCCTGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGCTACCCTGCGGTCATaGCGCACTTTCCCTAGCATC +
Preference number: 2 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGATLRS*RTFPSI
Trigger: GATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGC...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp TGCCCCCTGCCCATCAGAGTCCCTCTCCACAGAGGGGAAAGCGGCCAGGCTGATGGGTGTGCCCGGAGTTaGCTCTCTTTCCTGTTATGT +
Preference number: 2 (lower is better)
Translates to: CPLPIRVPLHRGESGQADGCARS*LSFLLC
Trigger: ACATAACAGGAAAGAGAGTCAACTCCGGGCACACCC...ATCAGCCTGGCCGCTTTCCCCTCTGTGGAGAGGGACTCTGATGGGCAGGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp CAGCTGGTGAGATTTCCTTGGTCACAGCAGTGGGGTCCGGAGGAGCCAGGTCTGCACTTACTGGCTGTGTaGCCTGGGAGAGCCACCATG +
Preference number: 2 (lower is better)
Translates to: QLVRFPWSQQWGPEEPGLHLLAV*PGRATM
Trigger: CATGGTGGCTCTCCCAGGTCACACAGCCAGTAAGTG...CAGACCTGGCTCCTCCGGACCCCACTGCTGTGACCAAGGAAATCTCACCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAAGCACCTGGGTCACGTaGATCCCAAGGGTACCAAGG +
Preference number: 2 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGSTWVT*IPRVPR
Trigger: CCTTGGTACCCTTGGGATGCACGTGACCCAGGTGCT...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGCGCTTCTAGCTGGCTaGCTGTGGCCCGAATCTTTC +
Preference number: 2 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGALLAG*LWPESF
Trigger: GAAAGATTCGGGCCACAGGCAGCCAGCTAGAAGCGC...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp GGCCGCTCCGGGGGCAATTCCTTCTCGGGGAGAGGAGTAGCTGGGAGGCATCCTAGTTTGTGGGAAACCTaGCAATGCTTTCCCTGTGGC +
Preference number: 2 (lower is better)
Translates to: GRSGGNSFSGRGVAGRHPSLWET*QCFPCG
Trigger: GCCACAGGGAAAGCATTGGCAGGTTTCCCACAAACT...AGGATGCCTCCCAGCTACTCCTCTCCCCGAGAAGGAATTGCCCCCGGAGCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCTGGCACCGCTTaGTTCTTCCCGTGGCCCGTG +
Preference number: 2 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPVAGTA*FFPWPV
Trigger: CACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
3UTR-3UTR CCA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGACGCGTGATATGTACCTaGAGCTGCAGACCTGGGGGT +
Preference number: 2 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGRVICT*SCRPGG
Trigger: ACCCCCAGGTCTGCAGCTCCAGGTACATATCACGCG...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTGTTTGCAGGGGGCCATaGCCACTGAGGACCTCGGCC +
Preference number: 2 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGVCRGP*PLRTSA
Trigger: GGCCGAGGTCCTCAGTGGCCATGGCCCCCTGCAAAC...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GGAAACAGGGTTCTGGGAAACCCTGCCAGACAGCCCCATACCCTGGTTGAGAGCTGCGGGTGGGTAGCATaGCTCTCTCCTACCCAGCCT +
Preference number: 2 (lower is better)
Translates to: GNRVLGNPARQPHTLVESCGWVA*LSPTQP
Trigger: AGGCTGGGTAGGAGAGAGCCATGCTACCCACCCGCA...GCTCTCAACCAGGGTATGGGGCTGTCTGGCAGGGTTTCCCAGAACCCTGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGACATTTTGCAGAAGGCTaGGTCAAGGCCACCCGGTGG +
Preference number: 2 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGHFAEG*VKATRW
Trigger: CCACCGGGTGGCCTTGACCCAGCCTTCTGCAAAATG...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp TGGCCCTGCAGCTTCCTTGCTGCAGGGAGGGAAATTCCACCCCAGATGAGTCCCAGCCGTGTCTTGGTCTaGGTAGCCGGGCTTGGTAGT +
Preference number: 2 (lower is better)
Translates to: WPCSFLAAGREIPPQMSPSRVLV*VAGLGS
Trigger: ACTACCAAGCCCGGCTACCCAGACCAAGACACGGCT...GGGACTCATCTGGGGTGGAATTTCCCTCCCTGCAGCAAGGAAGCTGCAGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGGGGCCGTTAGGTCTTaGGTAGAGACAGGGCCTTTG +
Preference number: 2 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGGAVRS*VETGPL
Trigger: CAAAGGCCCTGTCTCTACCCAAGACCTAACGGCCCC...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTGTGAATGTCCCTGCCTaGCCTATGCTGGGCCAGCCT +
Preference number: 2 (lower is better)
Translates to: ESSGLHSSGWGRHFRRRSVNVPA*PMLGQP
Trigger: AGGCTGGCCCAGCATAGGCCAGGCAGGGACATTCAC...ACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CAA 90 bp TGGCCATCTCCTCGGATCTGGGAAAGGTCCCGAGAGGTAGTCTCCTaGGCTCCCCTTCCTCAGCCAGACCCGATATCCATGGCACATCCA +
Preference number: 2 (lower is better)
Translates to: WPSPRIWERSREVVS*APLPQPDPISMAHP
Trigger: TGGATGTGCCATGGATATCGGGTCTGGCTGAGGAAGGGGAGCCAAGGAGACTACCTCTCGGGACCTTTCCCAGATCCGAGGAGATGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CAA 90 bp GAGACAGGGCCTTTGCTCTCTCTCTCCTCCAGGAAAAGCCGTGTCTaGGTCTGGGTAGCCGGGCTTGGTAGTGGTGGTGGGGCATCTGTA +
Preference number: 2 (lower is better)
Translates to: ETGPLLSLSSRKSRV*VWVAGLGSGGGASV
Trigger: TACAGATGCCCCACCACCACTACCAAGCCCGGCTACCCAGACCAAGACACGGCTTTTCCTGGAGGAGAGAGAGAGCAAAGGCCCTGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CAA 90 bp GAAACAGGGTTCTGGGAAACCCTGCCAGACAGCCCCATACCCTGGTaGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCA +
Preference number: 2 (lower is better)
Translates to: ETGFWETLPDSPIPW*RAPVCIAQAGADTS
Trigger: TGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGGTATGGGGCTGTCTGGCAGGGTTTCCCAGAACCCTGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp GTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTCGCTTGGTTGTTGAGTaGGGCCTAGAGGAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: VSLSAPSGGQGITVNDPGRLVVE*GLEEQQ
Trigger: CTGCTGCTCCTCTAGGCCTCACTCAACAACCAAGCG...ACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp AACCTCCTGAGATTAGCCTCCGAGGGGGTGTGCCCGGAGTTGACTCTCTTTCCTGCCAGGCTGTGCGCGTaGTATGTACCTGGAGCTGCA +
Preference number: 2 (lower is better)
Translates to: NLLRLASEGVCPELTLFPARLCA*YVPGAA
Trigger: TGCAGCTCCAGGTACATATCACGCGCACAGCCTGGC...AGGAAAGAGAGTCAACTCCGGGCACACCCCCTCGGAGGCTAATCTCAGGAGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp CACAGGCACCTCTGCCGTGTGGCCTCCCAGCTCTGGAAGGCAGTGACTAAGATTTTCTCCTGGAATAAATaGGGGCCGCTCCGGGGGCAA +
Preference number: 2 (lower is better)
Translates to: HRHLCRVASQLWKAVTKIFSWNK*GPLRGQ
Trigger: TTGCCCCCGGAGCGGCCCTCATTTATTCCAGGAGAA...AATCTTAGTCACTGCCTTCCAGAGCTGGGAGGCCACACGGCAGAGGTGCCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp CAGACGATGGGCTGTGCTGTGCTGGATGTTCACTCTGACCGTGGCGCTTCTAGCGGAAGGGAAGAGGCATaGTTGCCCGTGTCTCTGAGC +
Preference number: 2 (lower is better)
Translates to: QTMGCAVLDVHSDRGASSGREEA*LPVSLS
Trigger: GCTCAGAGACACGGGCAAGCATGCCTCTTCCCTTCC...GCTAGAAGCGCCACGGTCAGAGTGAACATCCAGCACAGCACAGCCCATCGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp AGCCCTGAGTCCCTTAAGTGTCTCCTACTGCCCCGCCACCCGGGTCCCTGCTCTTCCATGTGTTTTCTCTaGCCTGGGCTTTCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: SPESLKCLLLPRHPGPCSSMCFL*PGLSGS
Trigger: GCTTCCAGAAAGCCCAGGGCAGAGAAAACACATGGA...AGAGCAGGGACCCGGGTGGCGGGGCAGTAGGAGACACTTAAGGGACTCAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp CAGCTGGTGAGATTTCCTTGGTCACAGCAGTGGGGTCCGGAGGAGCCAGGTCTGAACCAGAGTTGGCTGTaGCTGGGGGTACATGAGCAC +
Preference number: 2 (lower is better)
Translates to: QLVRFPWSQQWGPEEPGLNQSWL*LGVHEH
Trigger: GTGCTCATGTACCCCCAGGCACAGCCAACTCTGGTT...CAGACCTGGCTCCTCCGGACCCCACTGCTGTGACCAAGGAAATCTCACCAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp TGGCCCTGCAGCTTCCTTGCTGCAGGGAGGGAAATTCCACCCCAGATGAGTCCCTGGGAAACCTGCCAATaGTTTCCCTGTGGCTTGCCC +
Preference number: 2 (lower is better)
Translates to: WPCSFLAAGREIPPQMSPWETCQ*FPCGLP
Trigger: GGGCAAGCCACAGGGAAAGCATTGGCAGGTTTCCCA...GGGACTCATCTGGGGTGGAATTTCCCTCCCTGCAGCAAGGAAGCTGCAGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp TGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGGAGCGCCACCCGGGTCCCTaGTCTGAGGCCTCTGGTCCA +
Preference number: 2 (lower is better)
Translates to: CNSATLPGKDVLHPTQKERHPGP*SEASGP
Trigger: TGGACCAGAGGCCTCAGAGCAGGGACCCGGGTGGCG...CTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp GGCCGCTCCGGGGGCAATTCCTTCTCGGGGAGAGGAGTAGCTGGGAGGCATCCTCCTCACCCAGTCCAATaGTCTCATTTTACAGATGGC +
Preference number: 2 (lower is better)
Translates to: GRSGGNSFSGRGVAGRHPPHPVQ*SHFTDG
Trigger: GCCATCTGTAAAATGAGAGCATTGGACTGGGTGAGG...AGGATGCCTCCCAGCTACTCCTCTCCCCGAGAAGGAATTGCCCCCGGAGCGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp TGGCCCTGCAGCTTCCTTGCTGCAGGGAGGGAAATTCCACCCCAGATGAGTCCCCAAAGCTCATGGCCTTaGTCTGCTCCTTCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: WPCSFLAAGREIPPQMSPQSSWP*SAPSWL
Trigger: CAGCCAGGAAGGAGCAGAGCAAGGCCATGAGCTTTG...GGGACTCATCTGGGGTGGAATTTCCCTCCCTGCAGCAAGGAAGCTGCAGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGCGTGGCGCTTCTAGCTaGCTGCCTGTGGCCCGAATC +
Preference number: 2 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGRGASS*LPVARI
Trigger: GATTCGGGCCACAGGCAGCCAGCTAGAAGCGCCACG...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTTCAGAGCTGTGTGCCTaGGTGAGCGGGTGGTGTAAG +
Preference number: 2 (lower is better)
Translates to: ESSGLHSSGWGRHFRRRSSELCA*VSGWCK
Trigger: CTTACACCACCCGCTCACCCAGGCACACAGCTCTGA...ACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp TGCCCCCTGCCCATCAGAGTCCCTCTCCACAGAGGGGAAAGCGGCCAGGCTGATGTCCTAATCTGCGTCTaGGTTTGGGCATCCTATCTG +
Preference number: 2 (lower is better)
Translates to: CPLPIRVPLHRGESGQADVLICV*VWASYL
Trigger: CAGATAGGATGCCCAAACCCAGACGCAGATTAGGAC...ATCAGCCTGGCCGCTTTCCCCTCTGTGGAGAGGGACTCTGATGGGCAGGGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp GTTCCCACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCGGGTATCACAGTGAATaGTCCGGGTCCTGGCCTCCG +
Preference number: 2 (lower is better)
Translates to: VPTMTAHLTLRPSSECTLGYHSE*SGSWPP
Trigger: CGGAGGCCAGGACCCGGATCATTCACTGTGATACCC...GAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGTGGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGCTTGCCCGTGTCTCTaGGCGCACCCTCTGGAGGGC +
Preference number: 2 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKACPCL*AHPLEG
Trigger: GCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGC...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp AGGCACCTGGCTCTGGAGTTTGCAGCAACACCCTGTGGTTGTCCAGTGTTAAGAGGGGTGGAAGAGATGTaGGCAGCGCCTGTACCCCTG +
Preference number: 2 (lower is better)
Translates to: RHLALEFAATPCGCPVLRGVEEM*AAPVPL
Trigger: CAGGGGTACAGGCGCTGCTCACATCTCTTCCACCCC...TCTTAACACTGGACAACCACAGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp AGGAGCAGGCTGCTACCCTGCGGTCATGACGCACTTTCCCTAGCATCATGTGGTGCTGAGCACCAACAATaGCCCATTCTGGGGGCTTCG +
Preference number: 2 (lower is better)
Translates to: RSRLLPCGHDALSLASCGAEHQQ*PILGAS
Trigger: CGAAGCCCCCAGAATGGGTCATTGTTGGTGCTCAGC...ACCACATGATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGCAGCCTGCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp TGGCCAGCCAAAGTGACCCCAACCCGGAGAATGTCCCTTTGGGAGAGAAGCACGAGCTGGCATTACAGGTaGATGCCACCTTGCGTGGCT +
Preference number: 2 (lower is better)
Translates to: WPAKVTPTRRMSLWERSTSWHYR*MPPCVA
Trigger: AGCCACGCAAGGTGGCATGCACCTGTAATGCCAGCT...CGTGCTTCTCTCCCAAAGGGACATTCTCCGGGTTGGGGTCACTTTGGCTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR-3UTR GCA 90 bp TGGCCAGCCAAAGTGACCCCAACCCGGAGAATGTCCCTTTGGGAGAGAAGCACGTTCAAGCAATTCCCCTaGCTCAGCCTCCCGAGTAGC +
Preference number: 2 (lower is better)
Translates to: WPAKVTPTRRMSLWERSTFKQFP*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCAGGGGAATTGCTTGAA...CGTGCTTCTCTCCCAAAGGGACATTCTCCGGGTTGGGGTCACTTTGGCTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR-3UTR GCA 90 bp AGGAAGGGCTGCTTAGAAGAGCAACCCTTAGCACCTGGGTCACGTGCATCCCAATGCAGACCTGGGGGTTaGCCATCCTCAGGAAGGCTG +
Preference number: 2 (lower is better)
Translates to: RKGCLEEQPLAPGSRASQCRPGG*PSSGRL
Trigger: CAGCCTTCCTGAGGATGGGCAACCCCCAGGTCTGCA...TTGGGATGCACGTGACCCAGGTGCTAAGGGTTGCTCTTCTAAGCAGCCCTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp AGCCCTGAGTCCCTTAAGTGTCTCCTACTGCCCCGCCACCCGGGTCCCTGCTCTCCCGAGTCCAGGAATTaGTGTAAACAAACCCAGATG +
Preference number: 2 (lower is better)
Translates to: SPESLKCLLLPRHPGPCSPESRN*CKQTQM
Trigger: CATCTGGGTTTGTTTACAGCAATTCCTGGACTCGGG...AGAGCAGGGACCCGGGTGGCGGGGCAGTAGGAGACACTTAAGGGACTCAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGGAAGGTGACCTTGTGTaGCGAGACAGCTGCCACCCG +
Preference number: 2 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGEGDLV*RDSCHP
Trigger: CGGGTGGCAGCTGTCTCGGCACACAAGGTCACCTTC...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp AGGAGCAGGCTGCTACCCTGCGGTCATGACGCACTTTCCCTAGCATCATGTGGTCCTGGGTCCTTCCTGTaGTTCAGTGAGGCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: RSRLLPCGHDALSLASCGPGSFL*FSEAGG
Trigger: TCCTCCTGCCTCACTGAAGCACAGGAAGGACCCAGG...ACCACATGATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGCAGCCTGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp AACCTCCTGAGATTAGCCTCCGAGGGGGTGTGCCCGGAGTTGACTCTCTTTCCTCCTGGGTCCTTCCTGTaGTTCAGTGAGGCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: NLLRLASEGVCPELTLFPPGSFL*FSEAGG
Trigger: TCCTCCTGCCTCACTGAAGCACAGGAAGGACCCAGG...AGGAAAGAGAGTCAACTCCGGGCACACCCCCTCGGAGGCTAATCTCAGGAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp CAGCTGGTGAGATTTCCTTGGTCACAGCAGTGGGGTCCGGAGGAGCCAGGTCTGCTCATGGCCTTGCTCTaGTCCTTCCTGGCTGTGTTA +
Preference number: 2 (lower is better)
Translates to: QLVRFPWSQQWGPEEPGLLMALL*SFLAVL
Trigger: TAACACAGCCAGGAAGGAGCAGAGCAAGGCCATGAG...CAGACCTGGCTCCTCCGGACCCCACTGCTGTGACCAAGGAAATCTCACCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGACGTCTCGTGGCTaGCACCGCTTGGTTCTTCCC +
Preference number: 2 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPVTSRG*HRLVLP
Trigger: GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCAC...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
3UTR-3UTR CCA 90 bp CTCCCGGAACAGGTGAGTGACAGACGATGGGCTGTGCTGTGCTGGATGTTCACTTCTGAATGGCCCAGATaGCCCCATGGCAGTGGGCTT +
Preference number: 2 (lower is better)
Translates to: LPEQVSDRRWAVLCWMFTSEWPR*PHGSGL
Trigger: AAGCCCACTGCCATGGGGCCATCTGGGCCATTCAGA...AGTGAACATCCAGCACAGCACAGCCCATCGTCTGTCACTCACCTGTTCCGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GGAAACAGGGTTCTGGGAAACCCTGCCAGACAGCCCCATACCCTGGTTGAGAGCTCAACAGTCCTGGAGTaGGAAGCTCCTCCACCTTGG +
Preference number: 2 (lower is better)
Translates to: GNRVLGNPARQPHTLVESSTVLE*EAPPPW
Trigger: CCAAGGTGGAGGAGCTTCCCACTCCAGGACTGTTGA...GCTCTCAACCAGGGTATGGGGCTGTCTGGCAGGGTTTCCCAGAACCCTGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTGTGAGTGACAGACGATaGGCTGTGCTGTGCTGGATG +
Preference number: 2 (lower is better)
Translates to: ESSGLHSSGWGRHFRRRSVSDRR*AVLCWM
Trigger: CATCCAGCACAGCACAGCCCATCGTCTGTCACTCAC...ACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTGCCTGGGTGAGCGGGTaGTGTAAGTGGAAGGCGCTT +
Preference number: 2 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGAWVSG*CKWKAL
Trigger: AAGCGCCTTCCACTTACACCACCCGCTCACCCAGGC...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTCCCAAGGCAAATTCCTaGCCCTGCAGCTTCCTTGCT +
Preference number: 2 (lower is better)
Translates to: ESSGLHSSGWGRHFRRRSPKANS*PCSFLA
Trigger: AGCAAGGAAGCTGCAGGGCCAGGAATTTGCCTTGGG...ACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp GCACGTGTGTTAGGGAAATATGCGGGTGAAGGGGTCCTGTGCCTGGTAGAGAGCAGGTGGAAGAGCACTTaGGTCGGAATCAGGGTCCCT +
Preference number: 2 (lower is better)
Translates to: ARVLGKYAGEGVLCLVESRWKST*VGIRVP
Trigger: AGGGACCCTGATTCCGACTCAAGTGCTCTTCCACCT...GCTCTCTACCAGGCACAGGACCCCTTCACCCGCATATTTCCCTAACACACGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR-3UTR TCA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGTCTCACTCCAGTCTCTaGATGGCCCAGATGGCCCCA +
Preference number: 2 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGSHSSL*MAQMAP
Trigger: TGGGGCCATCTGGGCCATTCAGAGACTGGAGTGAGA...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp CCATCTCCTCGGATCTGGGAAAGGTCCCGAGAGGTAGTCTCCTTGGCTCCCCTTGGGAAAACTGGGTTTTaGCCATCTGAGGGCACTCAG +
Preference number: 2 (lower is better)
Translates to: PSPRIWERSREVVSLAPLGKTGF*PSEGTQ
Trigger: CTGAGTGCCCTCAGATGGTCAAAACCCAGTTTTCCC...AAGGGGAGCCAAGGAGACTACCTCTCGGGACCTTTCCCAGATCCGAGGAGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp AGGCACCTGGCTCTGGAGTTTGCAGCAACACCCTGTGGTTGTCCAGTGTTAAGACTTTGGGGCACAAAGTaGAGGCCAGTGGGCCACTGC +
Preference number: 2 (lower is better)
Translates to: RHLALEFAATPCGCPVLRLWGTK*RPVGHC
Trigger: GCAGTGGCCCACTGGCCTTCACTTTGTGCCCCAAAG...TCTTAACACTGGACAACCACAGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp CTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTTTGGCTACCCTGCGGTCATaGCGCACTTTCCCTAGCATC +
Preference number: 2 (lower is better)
Translates to: LRVSSTPYFMGPNLRLGLATLRS*RTFPSI
Trigger: GATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGC...CAAACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp GGAAACAGGGTTCTGGGAAACCCTGCCAGACAGCCCCATACCCTGGTTGAGAGCGGGGGAAGAGTCAAGTaGGGATTTCCATGTCTGGAG +
Preference number: 2 (lower is better)
Translates to: GNRVLGNPARQPHTLVESGGRVK*GFPCLE
Trigger: CTCCAGACATGGAAATCCTCACTTGACTCTTCCCCC...GCTCTCAACCAGGGTATGGGGCTGTCTGGCAGGGTTTCCCAGAACCCTGTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp CACAGGCACCTCTGCCGTGTGGCCTCCCAGCTCTGGAAGGCAGTGACTAAGATTGGGGGAAGAGTCAAGTaGGGATTTCCATGTCTGGAG +
Preference number: 2 (lower is better)
Translates to: HRHLCRVASQLWKAVTKIGGRVK*GFPCLE
Trigger: CTCCAGACATGGAAATCCTCACTTGACTCTTCCCCC...AATCTTAGTCACTGCCTTCCAGAGCTGGGAGGCCACACGGCAGAGGTGCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp GAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTCGGGGATCTGGGATTTaGCTGGCAAAGGATCTGACA +
Preference number: 2 (lower is better)
Translates to: ESSGLHSSGWGRHFRRRSRGSGI*LAKDLT
Trigger: TGTCAGATCCTTTGCCAGTCAAATCCCAGATCCCCG...ACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp GGAGAATGTCCCTTTGGGAGAGAAGCACGTGTGTTAGGGAAATATGCGGGTGAATGCCTGGTAGAGAGCTaGCTGGGCTTCCCCGGGAGG +
Preference number: 2 (lower is better)
Translates to: GECPFGREARVLGKYAGECLVES*LGFPGR
Trigger: CCTCCCGGGGAAGCCCAGGCAGCTCTCTACCAGGCA...TTCACCCGCATATTTCCCTAACACACGTGCTTCTCTCCCAAAGGGACATTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR-3UTR GCA 90 bp TGCCCCCTGCCCATCAGAGTCCCTCTCCACAGAGGGGAAAGCGGCCAGGCTGATGTAAACAAACCCAGATaGAGGATCAACCCTTCTCAG +
Preference number: 2 (lower is better)
Translates to: CPLPIRVPLHRGESGQADVNKPR*RINPSQ
Trigger: CTGAGAAGGGTTGATCCTGCATCTGGGTTTGTTTAC...ATCAGCCTGGCCGCTTTCCCCTCTGTGGAGAGGGACTCTGATGGGCAGGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTAGCACCTGGGTCACGTaGATCCCAAGGGTACCAAGG +
Preference number: 2 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGSTWVT*IPRVPR
Trigger: CCTTGGTACCCTTGGGATGCACGTGACCCAGGTGCT...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp CAGCTGGTGAGATTTCCTTGGTCACAGCAGTGGGGTCCGGAGGAGCCAGGTCTGTCCATGTGTTTTCTCTaGCCTGGGCTTTCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: QLVRFPWSQQWGPEEPGLSMCFL*PGLSGS
Trigger: GCTTCCAGAAAGCCCAGGGCAGAGAAAACACATGGA...CAGACCTGGCTCCTCCGGACCCCACTGCTGTGACCAAGGAAATCTCACCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGGCGCTTCTAGCTGGCTaGCTGTGGCCCGAATCTTTC +
Preference number: 2 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGALLAG*LWPESF
Trigger: GAAAGATTCGGGCCACAGGCAGCCAGCTAGAAGCGC...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp GGAAACAGGGTTCTGGGAAACCCTGCCAGACAGCCCCATACCCTGGTTGAGAGCTGTGAGGCTAGCAACTaGTCACAAGGTGGTGGCAGA +
Preference number: 2 (lower is better)
Translates to: GNRVLGNPARQPHTLVESCEASN*SQGGGR
Trigger: TCTGCCACCACCTTGTGAGCAGTTGCTAGCCTCACA...GCTCTCAACCAGGGTATGGGGCTGTCTGGCAGGGTTTCCCAGAACCCTGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp TCCCTCAACCTTCCTACCAACCCCCAGTTTGTAGGTGAGAAAACGGAGGCTGAGGTGACGTCTCGTGGCTaGCACCGCTTGGTTCTTCCC +
Preference number: 2 (lower is better)
Translates to: SLNLPTNPQFVGEKTEAEVTSRG*HRLVLP
Trigger: GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCAC...CTCAGCCTCCGTTTTCTCACCTACAAACTGGGGGTTGGTAGGAAGGTTGAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR-3UTR CCA 90 bp GGAAACAGGGTTCTGGGAAACCCTGCCAGACAGCCCCATACCCTGGTTGAGAGCAGTGTTTCTTGGCTCTaGCCAGGTCACCTTCCCAGA +
Preference number: 2 (lower is better)
Translates to: GNRVLGNPARQPHTLVESSVSWL*PGHLPR
Trigger: TCTGGGAAGGTGACCTGGCCAGAGCCAAGAAACACT...GCTCTCAACCAGGGTATGGGGCTGTCTGGCAGGGTTTCCCAGAACCCTGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACTCTGAAAGTGTTTCTTaGCTCTGGCCAGGTCACCTT +
Preference number: 2 (lower is better)
Translates to: RGMLARVSERTLWRAGYHSESVS*LWPGHL
Trigger: AAGGTGACCTGGCCAGAGCCAAGAAACACTTTCAGA...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCCGCGTGATATGTACCTaGAGCTGCAGACCTGGGGGT +
Preference number: 2 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPRVICT*SCRPGG
Trigger: ACCCCCAGGTCTGCAGCTCCAGGTACATATCACGCG...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374630.8
3UTR-3UTR CCA 90 bp AGGCACCTGGCTCTGGAGTTTGCAGCAACACCCTGTGGTTGTCCAGTGTTAAGAATGGCCCCATGGCAGTaGGCTTTGGTGAGGCCTGGT +
Preference number: 2 (lower is better)
Translates to: RHLALEFAATPCGCPVLRMAPWQ*ALVRPG
Trigger: ACCAGGCCTCACCAAAGCCCACTGCCATGGGGCCAT...TCTTAACACTGGACAACCACAGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GGCATTGGAGTAACAGGGTCAGGGTTGATCTTGGACACAGCTGGTGAGATTTCCGCCCAGATGGCCCCATaGCAGTGGGCTTTGGTGAGG +
Preference number: 2 (lower is better)
Translates to: GIGVTGSGLILDTAGEISAQMAP*QWALVR
Trigger: CCTCACCAAAGCCCACTGCCATGGGGCCATCTGGGC...GGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp AGGAGCAGGCTGCTACCCTGCGGTCATGACGCACTTTCCCTAGCATCATGTGGTCCATCTCCTCGGATCTaGGAAAGGTCCCGAGAGGTA +
Preference number: 2 (lower is better)
Translates to: RSRLLPCGHDALSLASCGPSPRI*ERSREV
Trigger: TACCTCTCGGGACCTTTCCCAGATCCGAGGAGATGG...ACCACATGATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGCAGCCTGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTGTAGCACCTGTGCTCTaGGAAGCAGGTTTGCAGGGG +
Preference number: 2 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGVAPVL*EAGLQG
Trigger: CCCCTGCAAACCTGCTTCCCAGAGCACAGGTGCTAC...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGTCAGAGCTGTGTGCCTaGGTGAGCGGGTGGTGTAAG +
Preference number: 2 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGSELCA*VSGWCK
Trigger: CTTACACCACCCGCTCACCCAGGCACACAGCTCTGA...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTCTCAAGAACCTGCTGTaGCTGGACTGTACATCACGC +
Preference number: 2 (lower is better)
Translates to: ESSGLHSSGWGRHFRRRSLKNLL*LDCTSR
Trigger: GCGTGATGTACAGTCCAGCCACAGCAGGTTCTTGAG...ACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp CAGCTGGTGAGATTTCCTTGGTCACAGCAGTGGGGTCCGGAGGAGCCAGGTCTGTTGAGTGAACAGGTCTaGACCATAGCCTTGGGGTCT +
Preference number: 2 (lower is better)
Translates to: QLVRFPWSQQWGPEEPGLLSEQV*TIALGS
Trigger: AGACCCCAAGGCTATGGTCCAGACCTGTTCACTCAA...CAGACCTGGCTCCTCCGGACCCCACTGCTGTGACCAAGGAAATCTCACCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp CACAGGCACCTCTGCCGTGTGGCCTCCCAGCTCTGGAAGGCAGTGACTAAGATTCAAAAGGAGGGTCTTTaGCCCTTGCCAAGGTGCATC +
Preference number: 2 (lower is better)
Translates to: HRHLCRVASQLWKAVTKIQKEGL*PLPRCI
Trigger: GATGCACCTTGGCAAGGGCCAAAGACCCTCCTTTTG...AATCTTAGTCACTGCCTTCCAGAGCTGGGAGGCCACACGGCAGAGGTGCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CAA 90 bp TCTCCTTCAACAGGGGCCGTTAGGTCTTGGGTAGAGACAGGGCCTTaGCTCTCTCTCTCCTCCAGGAAAAGCCGTGTCTTGGTCTGGGTA +
Preference number: 2 (lower is better)
Translates to: SPSTGAVRSWVETGP*LSLSSRKSRVLVWV
Trigger: TACCCAGACCAAGACACGGCTTTTCCTGGAGGAGAGAGAGAGCAAAGGCCCTGTCTCTACCCAAGACCTAACGGCCCCTGTTGAAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAATCCCCGCGTTCTCCCTaGCCCAGGAGGACAAAAGCC +
Preference number: 2 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKSPRSP*PRRTKA
Trigger: GGCTTTTGTCCTCCTGGGTCAGGGAGAACGCGGGGA...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp AAAGTGACCCCAACCCGGAGAATGTCCCTTTGGGAGAGAAGCACGTGTGTTAGGCTGGTCTTGAACTCCTaGCCTTGTGATCTGCCCGCC +
Preference number: 2 (lower is better)
Translates to: KVTPTRRMSLWERSTCVRLVLNS*PCDLPA
Trigger: GGCGGGCAGATCACAAGGTCAGGAGTTCAAGACCAG...CCTAACACACGTGCTTCTCTCCCAAAGGGACATTCTCCGGGTTGGGGTCACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR-3UTR TCA 90 bp AGGAAGGGCTGCTTAGAAGAGCAACCCTTAGCACCTGGGTCACGTGCATCCCAATGGGTTTTGACCATCTaGGGGCACTCAGGAGCCTCA +
Preference number: 2 (lower is better)
Translates to: RKGCLEEQPLAPGSRASQWVLTI*GHSGAS
Trigger: TGAGGCTCCTGAGTGCCCTCAGATGGTCAAAACCCA...TTGGGATGCACGTGACCCAGGTGCTAAGGGTTGCTCTTCTAAGCAGCCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp GCACTCAGGCCATCATCTATTCTGATTGGTCTGCCCGAGTCTTCGCAGTTGATATGCAGGGGCTCACCCTaGTTCCCAGGGCATCGAAGG +
Preference number: 2 (lower is better)
Translates to: ALRPSSILIGLPESSQLICRGSP*FPGHRR
Trigger: CCTTCGATGCCCTGGGAATCAGGGTGAGCCCCTGCA...TATCAACTGCGAAGACTCGGGCAGACCAATCAGAATAGATGATGGCCTGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp TCCTTCCTCATGGGACTAAGGTGTATAAGTGTTTTGCACAGCCTGCCTCACCCAGGACAGGAAGCCATCTaGCGGGAAGCACCGACTGCC +
Preference number: 2 (lower is better)
Translates to: SFLMGLRCISVLHSLPHPGQEAI*REAPTA
Trigger: GGCAGTCGGTGCTTCCCGTCAGATGGCTTCCTGTCC...TGGGTGAGGCAGGCTGTGCAAAACACTTATACACCTTAGTCCCATGAGGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp GAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTCTGGGACAGTCACAGTaGCATCTGTTTGTTACCCTG +
Preference number: 2 (lower is better)
Translates to: ESSGLHSSGWGRHFRRRSLGQSQ*HLFVTL
Trigger: CAGGGTAACAAACAGATGTCACTGTGACTGTCCCAG...ACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAACCTGCCACTCCCCGCTaGGCAGCAAGCAAGAGGTTG +
Preference number: 2 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKPATPR*AASKRL
Trigger: CAACCTCTTGCTTGCTGCTCAGCGGGGAGTGGCAGG...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp CTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTTTGGAGGGAGAGGACTGCTaGGCACCAACAATGACCCAT +
Preference number: 2 (lower is better)
Translates to: LRVSSTPYFMGPNLRLGLEGEDC*APTMTH
Trigger: ATGGGTCATTGTTGGTGCTCAGCAGTCCTCTCCCTC...CAAACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp TTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCGCAAGAACAGTCATTaGTTTCCTTATGAGAATCCT +
Preference number: 2 (lower is better)
Translates to: LVTSRGWHRLVLPVARGLRKNSH*FPYENP
Trigger: AGGATTCTCATAAGGAAAGCAATGACTGTTCTTGCG...GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000374632.7
3UTR-3UTR GCA 90 bp CAGCTGGTGAGATTTCCTTGGTCACAGCAGTGGGGTCCGGAGGAGCCAGGTCTGCCCGAGTCCAGGAATTaGTGTAAACAAACCCAGATG +
Preference number: 2 (lower is better)
Translates to: QLVRFPWSQQWGPEEPGLPESRN*CKQTQM
Trigger: CATCTGGGTTTGTTTACAGCAATTCCTGGACTCGGG...CAGACCTGGCTCCTCCGGACCCCACTGCTGTGACCAAGGAAATCTCACCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp AGGAGCAGGCTGCTACCCTGCGGTCATGACGCACTTTCCCTAGCATCATGTGGTACAGACGATGGGCTGTaGTGTGCTGGATGTTCACTC +
Preference number: 2 (lower is better)
Translates to: RSRLLPCGHDALSLASCGTDDGL*CAGCSL
Trigger: GAGTGAACATCCAGCACAGCACAGCCCATCGTCTGT...ACCACATGATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGCAGCCTGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp TGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGGAGTTAAGTGTCTCCTACTaGCCCGCCACCCGGGTCCCT +
Preference number: 2 (lower is better)
Translates to: CNSATLPGKDVLHPTQKELSVSY*PATRVP
Trigger: AGGGACCCGGGTGGCGGGGCAGTAGGAGACACTTAA...CTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp GAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTGGAAGGCCTGATGCATaGAATTCTGCCACTCTACCA +
Preference number: 2 (lower is better)
Translates to: ESSGLHSSGWGRHFRRRSGRPDA*NSATLP
Trigger: TGGTAGAGTGGCAGAATTGCATGCATCAGGCCTTCC...ACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp TGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGGAGATGGCCCCATGGCAGTaGGCTTTGGTGAGGCCTGGT +
Preference number: 2 (lower is better)
Translates to: CNSATLPGKDVLHPTQKEMAPWQ*ALVRPG
Trigger: ACCAGGCCTCACCAAAGCCCACTGCCATGGGGCCAT...CTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GCAGCTGGTCCCCATTTCCACGGTGCCCTGGCCTGTGTTTACAAGGCAGCTTTCTTTCATCAACAGTCCTaGAGTGGGAAGCTCCTCCAC +
Preference number: 2 (lower is better)
Translates to: AAGPHFHGALACVYKAAFFHQQS*SGKLLH
Trigger: GTGGAGGAGCTTCCCACTCCAGGACTGTTGATGAAA...GAAAGCTGCCTTGTAAACACAGGCCAGGGCACCGTGGAAATGGGGACCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTTTTCATCAACAGTCCTaGAGTGGGAAGCTCCTCCAC +
Preference number: 2 (lower is better)
Translates to: ESSGLHSSGWGRHFRRRSFHQQS*SGKLLH
Trigger: GTGGAGGAGCTTCCCACTCCAGGACTGTTGATGAAA...ACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp AACCTCCTGAGATTAGCCTCCGAGGGGGTGTGCCCGGAGTTGACTCTCTTTCCTATTTCCACGGTGCCCTaGCCTGTGTTTACAAGGCAG +
Preference number: 2 (lower is better)
Translates to: NLLRLASEGVCPELTLFPISTVP*PVFTRQ
Trigger: CTGCCTTGTAAACACAGGCCAGGGCACCGTGGAAAT...AGGAAAGAGAGTCAACTCCGGGCACACCCCCTCGGAGGCTAATCTCAGGAGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp TCCTTCCTCATGGGACTAAGGTGTATAAGTGTTTTGCACAGCCTGCCTCACCCAGGCAGGAGGATTAACTaGGCAGGGCGGGAGCTCCCA +
Preference number: 2 (lower is better)
Translates to: SFLMGLRCISVLHSLPHPGRRIN*AGRELP
Trigger: TGGGAGCTCCCGCCCTGCCCAGTTAATCCTCCTGCC...TGGGTGAGGCAGGCTGTGCAAAACACTTATACACCTTAGTCCCATGAGGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTCTGGCAGCTGCGTCTTaGAGTGACCTTTCTTTTGAC +
Preference number: 2 (lower is better)
Translates to: ESSGLHSSGWGRHFRRRSLAAAS*SDLSFD
Trigger: GTCAAAAGAAAGGTCACTCCAAGACGCAGCTGCCAG...ACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTCATCACACAGCACAGTaGGGCTCCCTCAACTTCCCT +
Preference number: 2 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGHHTAQ*GSLNFP
Trigger: AGGGAAGTTGAGGGAGCCCCACTGTGCTGTGTGATG...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp AGGCACCTGGCTCTGGAGTTTGCAGCAACACCCTGTGGTTGTCCAGTGTTAAGAAGCCGTGTCTTGGTCTaGGTAGCCGGGCTTGGTAGT +
Preference number: 2 (lower is better)
Translates to: RHLALEFAATPCGCPVLRSRVLV*VAGLGS
Trigger: ACTACCAAGCCCGGCTACCCAGACCAAGACACGGCT...TCTTAACACTGGACAACCACAGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GGCATTGGAGTAACAGGGTCAGGGTTGATCTTGGACACAGCTGGTGAGATTTCCGGGGCGAAGGCTGTGTaGCCATGGAAGCTATGTCCC +
Preference number: 2 (lower is better)
Translates to: GIGVTGSGLILDTAGEISGAKAV*PWKLCP
Trigger: GGGACATAGCTTCCATGGCCACACAGCCTTCGCCCC...GGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp CACAGAGAAAACCAGAGTTGGCTGTGCCTGGGGGTACATGAGCACTCTAAGACCCCCCTTTCAGCCCTGTaGGCCAACAGGAGAAACAGT +
Preference number: 2 (lower is better)
Translates to: HRENQSWLCLGVHEHSKTPLSAL*ANRRNS
Trigger: ACTGTTTCTCCTGTTGGCTCACAGGGCTGAAAGGGG...GGTCTTAGAGTGCTCATGTACCCCCAGGCACAGCCAACTCTGGTTTTCTCTGTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp GCACGTGTGTTAGGGAAATATGCGGGTGAAGGGGTCCTGTGCCTGGTAGAGAGCCTGAGGGAGGTGCTATaGTTTGACCAAGGTCACAGA +
Preference number: 2 (lower is better)
Translates to: ARVLGKYAGEGVLCLVESLREVL*FDQGHR
Trigger: TCTGTGACCTTGGTCAAATCATAGCACCTCCCTCAG...GCTCTCTACCAGGCACAGGACCCCTTCACCCGCATATTTCCCTAACACACGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR-3UTR TCA 90 bp GGAGACATTGGAAACAGAAAAATCCAAAGCTCATGGCCTTGCTCTGCTCCTTCCCATCCTCAGGAAGGCTaGCCTTTCTGGGGTCCCCGC +
Preference number: 2 (lower is better)
Translates to: GDIGNRKIQSSWPCSAPSHPQEG*PFWGPR
Trigger: GCGGGGACCCCAGAAAGGTCAGCCTTCCTGAGGATG...GGAAGGAGCAGAGCAAGGCCATGAGCTTTGGATTTTTCTGTTTCCAATGTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp GCACTCAGGCCATCATCTATTCTGATTGGTCTGCCCGAGTCTTCGCAGTTGATAGGCAGGGTATCACAGTaGATGATCCGGGTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: ALRPSSILIGLPESSQLIGRVSQ*MIRVLA
Trigger: GGCCAGGACCCGGATCATTCACTGTGATACCCTGCC...TATCAACTGCGAAGACTCGGGCAGACCAATCAGAATAGATGATGGCCTGAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp AGGCACCTGGCTCTGGAGTTTGCAGCAACACCCTGTGGTTGTCCAGTGTTAAGACAGGGCATCGAAGGCTaGGTTCTGAGCCACTTCCAA +
Preference number: 2 (lower is better)
Translates to: RHLALEFAATPCGCPVLRQGIEG*VLSHFQ
Trigger: TTGGAAGTGGCTCAGAACTCAGCCTTCGATGCCCTG...TCTTAACACTGGACAACCACAGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp TGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGGAGCCAGCCTTTTGGAGATaGGCCCCTGATGGGAGAGGA +
Preference number: 2 (lower is better)
Translates to: CNSATLPGKDVLHPTQKEPAFWR*APDGRG
Trigger: TCCTCTCCCATCAGGGGCTCATCTCCAAAAGGCTGG...CTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp CACAGGCACCTCTGCCGTGTGGCCTCCCAGCTCTGGAAGGCAGTGACTAAGATTGATTATCTGCGTCAGTaGGGATGGAAACTGAAGCAG +
Preference number: 2 (lower is better)
Translates to: HRHLCRVASQLWKAVTKIDYLRQ*GWKLKQ
Trigger: CTGCTTCAGTTTCCATCCTCACTGACGCAGATAATC...AATCTTAGTCACTGCCTTCCAGAGCTGGGAGGCCACACGGCAGAGGTGCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp AGCCCTGAGTCCCTTAAGTGTCTCCTACTGCCCCGCCACCCGGGTCCCTGCTCTCGCAAGAACAGTCATTaGTTTCCTTATGAGAATCCT +
Preference number: 2 (lower is better)
Translates to: SPESLKCLLLPRHPGPCSRKNSH*FPYENP
Trigger: AGGATTCTCATAAGGAAAGCAATGACTGTTCTTGCG...AGAGCAGGGACCCGGGTGGCGGGGCAGTAGGAGACACTTAAGGGACTCAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
3UTR-3UTR GCA 90 bp TCCTTCCTCATGGGACTAAGGTGTATAAGTGTTTTGCACAGCCTGCCTCACCCATCTGGGAAGCAGGTTTaGAGGGGGCCATGGCCACTG +
Preference number: 2 (lower is better)
Translates to: SFLMGLRCISVLHSLPHPSGKQV*RGPWPL
Trigger: CAGTGGCCATGGCCCCCTGCAAACCTGCTTCCCAGA...TGGGTGAGGCAGGCTGTGCAAAACACTTATACACCTTAGTCCCATGAGGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAATCTGGGAAGCAGGTTTaGAGGGGGCCATGGCCACTG +
Preference number: 2 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKSGKQV*RGPWPL
Trigger: CAGTGGCCATGGCCCCCTGCAAACCTGCTTCCCAGA...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTTCCCCATTTCCACGGTaGCCTGGCCTGTGTTTACAA +
Preference number: 2 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGSPFPR*PGLCLQ
Trigger: TTGTAAACACAGGCCAGGGCACCGTGGAAATGGGGA...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp CAGCTGGTGAGATTTCCTTGGTCACAGCAGTGGGGTCCGGAGGAGCCAGGTCTGCTGAGTAAGAGGCACTaGTGGTTAGTAAACAGCCAT +
Preference number: 2 (lower is better)
Translates to: QLVRFPWSQQWGPEEPGLLSKRH*WLVNSH
Trigger: ATGGCTGTTTACTAACCAGCAGTGCCTCTTACTCAG...CAGACCTGGCTCCTCCGGACCCCACTGCTGTGACCAAGGAAATCTCACCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTACTATGCTACCCTCCTaGTCAAGAACCTGCTGTGGC +
Preference number: 2 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGTMLPS*SRTCCG
Trigger: GCCACAGCAGGTTCTTGAGCAGGAGGGTAGCATAGT...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp ACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCGTCAATCTTGGTGACGTCTCGTaGCTGGCACCGCTTGGTTCT +
Preference number: 2 (lower is better)
Translates to: TMTAHLTLRPSSECTLVNLGDVS*LAPLGS
Trigger: AGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG...ATTGACGAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
3UTR-3UTR CCA 90 bp CACAGGCACCTCTGCCGTGTGGCCTCCCAGCTCTGGAAGGCAGTGACTAAGATTACTGATTGCTCTGCTTaGGTGTCTGTGTTGGTTCAC +
Preference number: 2 (lower is better)
Translates to: HRHLCRVASQLWKAVTKITDCSA*VSVLVH
Trigger: GTGAACCAACACAGACACCCAAGCAGAGCAATCAGT...AATCTTAGTCACTGCCTTCCAGAGCTGGGAGGCCACACGGCAGAGGTGCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp TGGCCCTGCAGCTTCCTTGCTGCAGGGAGGGAAATTCCACCCCAGATGAGTCCCCCTCCTCCTGCCACGTaGACAATTCTGATTTTAATG +
Preference number: 2 (lower is better)
Translates to: WPCSFLAAGREIPPQMSPPPPAT*TILILM
Trigger: CATTAAAATCAGAATTGTCCACGTGGCAGGAGGAGG...GGGACTCATCTGGGGTGGAATTTCCCTCCCTGCAGCAAGGAAGCTGCAGGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp TGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGGAGCAAAGTGAAGGCCAGTaGGCCACTGCCGGCCAGTTT +
Preference number: 2 (lower is better)
Translates to: CNSATLPGKDVLHPTQKEQSEGQ*ATAGQF
Trigger: AAACTGGCCGGCAGTGGCCCACTGGCCTTCACTTTG...CTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp CAGCTGGTGAGATTTCCTTGGTCACAGCAGTGGGGTCCGGAGGAGCCAGGTCTGTTTGTTACCCTGAAGTaGAGACACAGAGGTCTGGTA +
Preference number: 2 (lower is better)
Translates to: QLVRFPWSQQWGPEEPGLFVTLK*RHRGLV
Trigger: TACCAGACCTCTGTGTCTCCACTTCAGGGTAACAAA...CAGACCTGGCTCCTCCGGACCCCACTGCTGTGACCAAGGAAATCTCACCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTATTTCCACGGTGCCCTaGCCTGTGTTTACAAGGCAG +
Preference number: 2 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGISTVP*PVFTRQ
Trigger: CTGCCTTGTAAACACAGGCCAGGGCACCGTGGAAAT...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAAGTAAGAGGCACTGCTaGTTAGTAAACAGCCATAGC +
Preference number: 2 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGSKRHC*LVNSHS
Trigger: GCTATGGCTGTTTACTAACCAGCAGTGCCTCTTACT...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GGAAACAGGGTTCTGGGAAACCCTGCCAGACAGCCCCATACCCTGGTTGAGAGCGAAGCCTGGAGGAAATaGGGTAGACATCAGCCAAAT +
Preference number: 2 (lower is better)
Translates to: GNRVLGNPARQPHTLVESEAWRK*GRHQPN
Trigger: ATTTGGCTGATGTCTACCCCATTTCCTCCAGGCTTC...GCTCTCAACCAGGGTATGGGGCTGTCTGGCAGGGTTTCCCAGAACCCTGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp CACAGGCACCTCTGCCGTGTGGCCTCCCAGCTCTGGAAGGCAGTGACTAAGATTGGAAATATTCCTCAGTaGGGGTCTCCCAAGGCAAAT +
Preference number: 2 (lower is better)
Translates to: HRHLCRVASQLWKAVTKIGNIPQ*GSPKAN
Trigger: ATTTGCCTTGGGAGACCCCCACTGAGGAATATTTCC...AATCTTAGTCACTGCCTTCCAGAGCTGGGAGGCCACACGGCAGAGGTGCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CAA 90 bp GCTGCAAGACCATTCTCCACCTTAAGTTTGATGGCAGAAGCCATTTaGCAGAAGGCTGGGTCAAGGCCACCCGGTGGTGTATTCGCATGC +
Preference number: 2 (lower is better)
Translates to: AARPFSTLSLMAEAI*QKAGSRPPGGVFAC
Trigger: GCATGCGAATACACCACCGGGTGGCCTTGACCCAGCCTTCTGCAAAATGGCTTCTGCCATCAAACTTAAGGTGGAGAATGGTCTTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp GTTCCCACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCTCGAAGGCTGAGTTCTaGGCCACTTCCAACTCACTT +
Preference number: 2 (lower is better)
Translates to: VPTMTAHLTLRPSSECTLSKAEF*ATSNSL
Trigger: AAGTGAGTTGGAAGTGGCTCAGAACTCAGCCTTCGA...GAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGTGGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp GGAGACATTGGAAACAGAAAAATCCAAAGCTCATGGCCTTGCTCTGCTCCTTCCCCCGGAACAGGTGAGTaGCAGACGATGGGCTGTGCT +
Preference number: 2 (lower is better)
Translates to: GDIGNRKIQSSWPCSAPSPGTGE*QTMGCA
Trigger: AGCACAGCCCATCGTCTGTCACTCACCTGTTCCGGG...GGAAGGAGCAGAGCAAGGCCATGAGCTTTGGATTTTTCTGTTTCCAATGTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp TTTTTCTTAATCCCTGTCTACAGCAGACCCTCTCTCTGCAGACATCAGGGCAGTCTTTGGGGCACAAAGTaGAGGCCAGTGGGCCACTGC +
Preference number: 2 (lower is better)
Translates to: FFLIPVYSRPSLCRHQGSLWGTK*RPVGHC
Trigger: GCAGTGGCCCACTGGCCTTCACTTTGTGCCCCAAAG...ACTGCCCTGATGTCTGCAGAGAGAGGGTCTGCTGTAGACAGGGATTAAGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp GGAGACATTGGAAACAGAAAAATCCAAAGCTCATGGCCTTGCTCTGCTCCTTCCGCTCCCACCAGAAGGTaGCCTTGTGTGCCGAGACAG +
Preference number: 2 (lower is better)
Translates to: GDIGNRKIQSSWPCSAPSAPTRR*PCVPRQ
Trigger: CTGTCTCGGCACACAAGGTCACCTTCTGGTGGGAGC...GGAAGGAGCAGAGCAAGGCCATGAGCTTTGGATTTTTCTGTTTCCAATGTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp AGGAGCAGGCTGCTACCCTGCGGTCATGACGCACTTTCCCTAGCATCATGTGGTATCTGTTTGTTACCCTaGAGTGGAGACACAGAGGTC +
Preference number: 2 (lower is better)
Translates to: RSRLLPCGHDALSLASCGICLLP*SGDTEV
Trigger: GACCTCTGTGTCTCCACTTCAGGGTAACAAACAGAT...ACCACATGATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGCAGCCTGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp ACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCGTCAATATATGTACCTGGAGCTaGAGACCTGGGGGTTGCCCA +
Preference number: 2 (lower is better)
Translates to: TMTAHLTLRPSSECTLVNICTWS*RPGGCP
Trigger: TGGGCAACCCCCAGGTCTGCAGCTCCAGGTACATAT...ATTGACGAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp GCACTCAGGCCATCATCTATTCTGATTGGTCTGCCCGAGTCTTCGCAGTTGATAGCTGACGGCAGTCACTaGAGTATCAGTCCTCGAGGC +
Preference number: 2 (lower is better)
Translates to: ALRPSSILIGLPESSQLIADGSH*SISPRG
Trigger: GCCTCGAGGACTGATACTGCAGTGACTGCCGTCAGC...TATCAACTGCGAAGACTCGGGCAGACCAATCAGAATAGATGATGGCCTGAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp TGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGGAGTGGGAAACCTGCCAATaGTTTCCCTGTGGCTTGCCC +
Preference number: 2 (lower is better)
Translates to: CNSATLPGKDVLHPTQKEWETCQ*FPCGLP
Trigger: GGGCAAGCCACAGGGAAAGCATTGGCAGGTTTCCCA...CTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp CAGCTGGTGAGATTTCCTTGGTCACAGCAGTGGGGTCCGGAGGAGCCAGGTCTGGTATTCAGCGATTATTaGAATCCCTGTGGTTCCAAC +
Preference number: 2 (lower is better)
Translates to: QLVRFPWSQQWGPEEPGLVFSDY*NPCGSN
Trigger: GTTGGAACCACAGGGATTGCAATAATCGCTGAATAC...CAGACCTGGCTCCTCCGGACCCCACTGCTGTGACCAAGGAAATCTCACCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAACTCCAGTCTCTGAATaGCCCAGATGGCCCCATGGC +
Preference number: 2 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKTPVSE*PRWPHG
Trigger: GCCATGGGGCCATCTGGGCCATTCAGAGACTGGAGT...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GGCATTGGAGTAACAGGGTCAGGGTTGATCTTGGACACAGCTGGTGAGATTTCCGCCAGAAAGGCCACGTaGAGCTGTCGTTCTCCATGT +
Preference number: 2 (lower is better)
Translates to: GIGVTGSGLILDTAGEISARKAT*SCRSPC
Trigger: ACATGGAGAACGACAGCTCCACGTGGCCTTTCTGGC...GGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GCAGCTGGTCCCCATTTCCACGGTGCCCTGGCCTGTGTTTACAAGGCAGCTTTCCCTCCTCCTGCCACGTaGACAATTCTGATTTTAATG +
Preference number: 2 (lower is better)
Translates to: AAGPHFHGALACVYKAAFPPPAT*TILILM
Trigger: CATTAAAATCAGAATTGTCCACGTGGCAGGAGGAGG...GAAAGCTGCCTTGTAAACACAGGCCAGGGCACCGTGGAAATGGGGACCAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GGAAACAGGGTTCTGGGAAACCCTGCCAGACAGCCCCATACCCTGGTTGAGAGCTTGTGTATAAAAAGTTaGGCACGGTGCCTGGCACAT +
Preference number: 2 (lower is better)
Translates to: GNRVLGNPARQPHTLVESLCIKS*ARCLAH
Trigger: ATGTGCCAGGCACCGTGCCCAACTTTTTATACACAA...GCTCTCAACCAGGGTATGGGGCTGTCTGGCAGGGTTTCCCAGAACCCTGTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp GCAGCTGGTCCCCATTTCCACGGTGCCCTGGCCTGTGTTTACAAGGCAGCTTTCATTCAATTCACTAACTaGTTGCTCTGCTTGGGTGTC +
Preference number: 2 (lower is better)
Translates to: AAGPHFHGALACVYKAAFIQFTN*LLCLGV
Trigger: GACACCCAAGCAGAGCAATCAGTTAGTGAATTGAAT...GAAAGCTGCCTTGTAAACACAGGCCAGGGCACCGTGGAAATGGGGACCAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp CTCTGCAGACATCAGGGCAGTTTGTTATGGGGGAAGAGTCAAGTGAGGATTTCCCAGGGCATCGAAGGCTaGGTTCTGAGCCACTTCCAA +
Preference number: 2 (lower is better)
Translates to: LCRHQGSLLWGKSQVRISQGIEG*VLSHFQ
Trigger: TTGGAAGTGGCTCAGAACTCAGCCTTCGATGCCCTG...GGAAATCCTCACTTGACTCTTCCCCCATAACAAACTGCCCTGATGTCTGCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGATCTGTTTGTTACCCTaGAGTGGAGACACAGAGGTC +
Preference number: 2 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGICLLP*SGDTEV
Trigger: GACCTCTGTGTCTCCACTTCAGGGTAACAAACAGAT...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp TTTTTCTTAATCCCTGTCTACAGCAGACCCTCTCTCTGCAGACATCAGGGCAGTTTGGAGATGAGCCCCTaGTGGGAGAGGAGTGTGAGG +
Preference number: 2 (lower is better)
Translates to: FFLIPVYSRPSLCRHQGSLEMSP*WERSVR
Trigger: CCTCACACTCCTCTCCCATCAGGGGCTCATCTCCAA...ACTGCCCTGATGTCTGCAGAGAGAGGGTCTGCTGTAGACAGGGATTAAGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTGATTATCTGCGTCAGTaGGGATGGAAACTGAAGCAG +
Preference number: 2 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGDYLRQ*GWKLKQ
Trigger: CTGCTTCAGTTTCCATCCTCACTGACGCAGATAATC...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp AGGCACCTGGCTCTGGAGTTTGCAGCAACACCCTGTGGTTGTCCAGTGTTAAGACGATGGCAAACATTTTaGGAAATCCCAGGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: RHLALEFAATPCGCPVLRRWQTF*EIPGGG
Trigger: CCCACCTCCTGGGATTTCTCAAAATGTTTGCCATCG...TCTTAACACTGGACAACCACAGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp TTTTTCTTAATCCCTGTCTACAGCAGACCCTCTCTCTGCAGACATCAGGGCAGTGGAAGGGAAGAGGCATaGTTGCCCGTGTCTCTGAGC +
Preference number: 2 (lower is better)
Translates to: FFLIPVYSRPSLCRHQGSGREEA*LPVSLS
Trigger: GCTCAGAGACACGGGCAAGCATGCCTCTTCCCTTCC...ACTGCCCTGATGTCTGCAGAGAGAGGGTCTGCTGTAGACAGGGATTAAGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp TGCCAAGGTGCATCTGTAACTCAGATCCAAGGGATGGAGCTTTTCTTAGTATCTTGGCCTCCTGGCGAGTaGCTGGCCCTGCAGTGGATA +
Preference number: 2 (lower is better)
Translates to: CQGASVTQIQGMELFLVSWPPGE*LALQWI
Trigger: TATCCACTGCAGGGCCAGCCACTCGCCAGGAGGCCA...AGATACTAAGAAAAGCTCCATCCCTTGGATCTGAGTTACAGATGCACCTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
3UTR-3UTR CCA 90 bp AGGGAGTTGGAGAGAAACTGCTTTTGTCTCCGATTGGACACATCGCATGAATCTGTGACGTCTCGTGGCTaGCACCGCTTGGTTCTTCCC +
Preference number: 2 (lower is better)
Translates to: RELERNCFCLRLDTSHESVTSRG*HRLVLP
Trigger: GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCAC...AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000374632.7
3UTR-3UTR CCA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCTCTGAAAGTGTTTCTTaGCTCTGGCCAGGTCACCTT +
Preference number: 2 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPSESVS*LWPGHL
Trigger: AAGGTGACCTGGCCAGAGCCAAGAAACACTTTCAGA...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000374632.7
3UTR-3UTR CCA 90 bp GGAGACATTGGAAACAGAAAAATCCAAAGCTCATGGCCTTGCTCTGCTCCTTCCCAAAGTGAAGGCCAGTaGGCCACTGCCGGCCAGTTT +
Preference number: 2 (lower is better)
Translates to: GDIGNRKIQSSWPCSAPSQSEGQ*ATAGQF
Trigger: AAACTGGCCGGCAGTGGCCCACTGGCCTTCACTTTG...GGAAGGAGCAGAGCAAGGCCATGAGCTTTGGATTTTTCTGTTTCCAATGTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GGAGACATTGGAAACAGAAAAATCCAAAGCTCATGGCCTTGCTCTGCTCCTTCCCAGCGCCTGTACCCCTaGGACAGTCACAGTGACATC +
Preference number: 2 (lower is better)
Translates to: GDIGNRKIQSSWPCSAPSQRLYP*DSHSDI
Trigger: GATGTCACTGTGACTGTCCCAGGGGTACAGGCGCTG...GGAAGGAGCAGAGCAAGGCCATGAGCTTTGGATTTTTCTGTTTCCAATGTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GGCATTGGAGTAACAGGGTCAGGGTTGATCTTGGACACAGCTGGTGAGATTTCCCTCAAGAACCTGCTGTaGCTGGACTGTACATCACGC +
Preference number: 2 (lower is better)
Translates to: GIGVTGSGLILDTAGEISLKNLL*LDCTSR
Trigger: GCGTGATGTACAGTCCAGCCACAGCAGGTTCTTGAG...GGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTCTGGTTGGAATCTTCTaGGAATCACCTCTGGGAATC +
Preference number: 2 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGLVGIF*ESPLGI
Trigger: GATTCCCAGAGGTGATTCCCAGAAGATTCCAACCAG...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CAA 90 bp CTCAGGCCATCATCTATTCTGATTGGTCTGCCCGAGTCTTCGCAGTaGATATTTTGGATATCATCCCCGAGGGAGAGGACTGCTGAGCAC +
Preference number: 2 (lower is better)
Translates to: LRPSSILIGLPESSQ*IFWISSPRERTAEH
Trigger: GTGCTCAGCAGTCCTCTCCCTCGGGGATGATATCCAAAATATCAACTGCGAAGACTCGGGCAGACCAATCAGAATAGATGATGGCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CAA 90 bp AAATCCCAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTaGGAATCTTCTGGGAATCACCTCTGGGAATCAGTTTCCTCACTC +
Preference number: 2 (lower is better)
Translates to: KSQEVGRKDYRQMAW*ESSGNHLWESVSSL
Trigger: GAGTGAGGAAACTGATTCCCAGAGGTGATTCCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTGGGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CAA 90 bp ATCCCTGTCTACAGCAGACCCTCTCTCTGCAGACATCAGGGCAGTTaGTTATGGGGGAAGAGTCAAGTGAGGATTTCCATGTCTGGAGGA +
Preference number: 2 (lower is better)
Translates to: IPVYSRPSLCRHQGS*LWGKSQVRISMSGG
Trigger: TCCTCCAGACATGGAAATCCTCACTTGACTCTTCCCCCATAACAAACTGCCCTGATGTCTGCAGAGAGAGGGTCTGCTGTAGACAGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp TGCCAAGGTGCATCTGTAACTCAGATCCAAGGGATGGAGCTTTTCTTAGTATCTAGCGGCAGTCGGAGCTaGCGGCAGTCACTGCAGTAT +
Preference number: 2 (lower is better)
Translates to: CQGASVTQIQGMELFLVSSGSRS*RQSLQY
Trigger: ATACTGCAGTGACTGCCGTCAGCTCCGACTGCCGCT...AGATACTAAGAAAAGCTCCATCCCTTGGATCTGAGTTACAGATGCACCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCTCTCACTCCAGTCTCTaGATGGCCCAGATGGCCCCA +
Preference number: 2 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLSHSSL*MAQMAP
Trigger: TGGGGCCATCTGGGCCATTCAGAGACTGGAGTGAGA...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp TTTTTCTTAATCCCTGTCTACAGCAGACCCTCTCTCTGCAGACATCAGGGCAGTTGGGTTTTGACCATCTaGGGGCACTCAGGAGCCTCA +
Preference number: 2 (lower is better)
Translates to: FFLIPVYSRPSLCRHQGSWVLTI*GHSGAS
Trigger: TGAGGCTCCTGAGTGCCCTCAGATGGTCAAAACCCA...ACTGCCCTGATGTCTGCAGAGAGAGGGTCTGCTGTAGACAGGGATTAAGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp TCCTTCCTCATGGGACTAAGGTGTATAAGTGTTTTGCACAGCCTGCCTCACCCAGGGAAAACTGGGTTTTaGCCATCTGAGGGCACTCAG +
Preference number: 2 (lower is better)
Translates to: SFLMGLRCISVLHSLPHPGKTGF*PSEGTQ
Trigger: CTGAGTGCCCTCAGATGGTCAAAACCCAGTTTTCCC...TGGGTGAGGCAGGCTGTGCAAAACACTTATACACCTTAGTCCCATGAGGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp TGCCAAGGTGCATCTGTAACTCAGATCCAAGGGATGGAGCTTTTCTTAGTATCTGCTCCCACCAGAAGGTaGCCTTGTGTGCCGAGACAG +
Preference number: 2 (lower is better)
Translates to: CQGASVTQIQGMELFLVSAPTRR*PCVPRQ
Trigger: CTGTCTCGGCACACAAGGTCACCTTCTGGTGGGAGC...AGATACTAAGAAAAGCTCCATCCCTTGGATCTGAGTTACAGATGCACCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCGCTGAGCACCAACAATaGCCCATTCTGGGGGCTTCG +
Preference number: 2 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLAEHQQ*PILGAS
Trigger: CGAAGCCCCCAGAATGGGTCATTGTTGGTGCTCAGC...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp GGCATTGGAGTAACAGGGTCAGGGTTGATCTTGGACACAGCTGGTGAGATTTCCTGGGGAAAGTTCAGCTaGTGCCATCTGAGTAAGAGG +
Preference number: 2 (lower is better)
Translates to: GIGVTGSGLILDTAGEISWGKFS*CHLSKR
Trigger: CCTCTTACTCAGATGGCATCAGCTGAACTTTCCCCA...GGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp GGCATTGGAGTAACAGGGTCAGGGTTGATCTTGGACACAGCTGGTGAGATTTCCCGATGGCAAACATTTTaGGAAATCCCAGGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: GIGVTGSGLILDTAGEISRWQTF*EIPGGG
Trigger: CCCACCTCCTGGGATTTCTCAAAATGTTTGCCATCG...GGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp TGCCAAGGTGCATCTGTAACTCAGATCCAAGGGATGGAGCTTTTCTTAGTATCTCGCCTGGCCAGGTGTTaGGTGAACAGGTCTGGACCA +
Preference number: 2 (lower is better)
Translates to: CQGASVTQIQGMELFLVSRLARC*VNRSGP
Trigger: TGGTCCAGACCTGTTCACTCAACACCTGGCCAGGCG...AGATACTAAGAAAAGCTCCATCCCTTGGATCTGAGTTACAGATGCACCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAACTATGCTACCCTCCTaGTCAAGAACCTGCTGTGGC +
Preference number: 2 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKTMLPS*SRTCCG
Trigger: GCCACAGCAGGTTCTTGAGCAGGAGGGTAGCATAGT...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp AGCTTGCATTTTCTAAGCACCCGCTTCCTTTATATCTCCCTCAACCTTCCTACCCTTGGTGACGTCTCGTaGCTGGCACCGCTTGGTTCT +
Preference number: 2 (lower is better)
Translates to: SLHFLSTRFLYISLNLPTLGDVS*LAPLGS
Trigger: AGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG...GGTAGGAAGGTTGAGGGAGATATAAAGGAAGCGGGTGCTTAGAAAATGCAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR-3UTR CCA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCACTCCAGTCTCTGAATaGCCCAGATGGCCCCATGGC +
Preference number: 2 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLTPVSE*PRWPHG
Trigger: GCCATGGGGCCATCTGGGCCATTCAGAGACTGGAGT...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp TTTTTCTTAATCCCTGTCTACAGCAGACCCTCTCTCTGCAGACATCAGGGCAGTTCAACAGTCCTGGAGTaGGAAGCTCCTCCACCTTGG +
Preference number: 2 (lower is better)
Translates to: FFLIPVYSRPSLCRHQGSSTVLE*EAPPPW
Trigger: CCAAGGTGGAGGAGCTTCCCACTCCAGGACTGTTGA...ACTGCCCTGATGTCTGCAGAGAGAGGGTCTGCTGTAGACAGGGATTAAGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp TGCCAAGGTGCATCTGTAACTCAGATCCAAGGGATGGAGCTTTTCTTAGTATCTTGCGGGTGGGTAGCATaGCTCTCTCCTACCCAGCCT +
Preference number: 2 (lower is better)
Translates to: CQGASVTQIQGMELFLVSCGWVA*LSPTQP
Trigger: AGGCTGGGTAGGAGAGAGCCATGCTACCCACCCGCA...AGATACTAAGAAAAGCTCCATCCCTTGGATCTGAGTTACAGATGCACCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp AACCTCCTGAGATTAGCCTCCGAGGGGGTGTGCCCGGAGTTGACTCTCTTTCCTGAGTCTTCCAGCCTTTaGTACCATCTTCAAACAACA +
Preference number: 2 (lower is better)
Translates to: NLLRLASEGVCPELTLFPESSSL*YHLQTT
Trigger: TGTTGTTTGAAGATGGTACCAAAGGCTGGAAGACTC...AGGAAAGAGAGTCAACTCCGGGCACACCCCCTCGGAGGCTAATCTCAGGAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp CTCTGCAGACATCAGGGCAGTTTGTTATGGGGGAAGAGTCAAGTGAGGATTTCCTGCTCTGCTCCTTCCTaGCTGTGTTACCCTGAGCAA +
Preference number: 2 (lower is better)
Translates to: LCRHQGSLLWGKSQVRISCSAPS*LCYPEQ
Trigger: TTGCTCAGGGTAACACAGCCAGGAAGGAGCAGAGCA...GGAAATCCTCACTTGACTCTTCCCCCATAACAAACTGCCCTGATGTCTGCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp CAGCTGGTGAGATTTCCTTGGTCACAGCAGTGGGGTCCGGAGGAGCCAGGTCTGGAGTTTGCTAGTCTGTaGAATGGGAGTAATAATTGT +
Preference number: 2 (lower is better)
Translates to: QLVRFPWSQQWGPEEPGLEFASL*NGSNNC
Trigger: ACAATTATTACTCCCATTCCACAGACTAGCAAACTC...CAGACCTGGCTCCTCCGGACCCCACTGCTGTGACCAAGGAAATCTCACCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CAA 90 bp AAATACTCCTACAAAGGCATTGGAGTAACAGGGTCAGGGTTGATCTaGGACACAGCTGGTGAGATTTCCTTGGTCACAGCAGTGGGGTCC +
Preference number: 2 (lower is better)
Translates to: KYSYKGIGVTGSGLI*DTAGEISLVTAVGS
Trigger: GGACCCCACTGCTGTGACCAAGGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCCTTTGTAGGAGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp GGAGACATTGGAAACAGAAAAATCCAAAGCTCATGGCCTTGCTCTGCTCCTTCCGGCACTTGGGGAGGTTaGGCCAGGAAAGGATTAGTA +
Preference number: 2 (lower is better)
Translates to: GDIGNRKIQSSWPCSAPSGTWGG*ARKGLV
Trigger: TACTAATCCTTTCCTGGCTCAACCTCCCCAAGTGCC...GGAAGGAGCAGAGCAAGGCCATGAGCTTTGGATTTTTCTGTTTCCAATGTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp TTTTTCTTAATCCCTGTCTACAGCAGACCCTCTCTCTGCAGACATCAGGGCAGTTCAGCTGATGCCATCTaGGTAAGAGGCACTGCTGGT +
Preference number: 2 (lower is better)
Translates to: FFLIPVYSRPSLCRHQGSSADAI*VRGTAG
Trigger: ACCAGCAGTGCCTCTTACTCAGATGGCATCAGCTGA...ACTGCCCTGATGTCTGCAGAGAGAGGGTCTGCTGTAGACAGGGATTAAGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp TGCCAAGGTGCATCTGTAACTCAGATCCAAGGGATGGAGCTTTTCTTAGTATCTGCATCCTGCCCCATCTaGTGGCTGAACTGGTGCTTC +
Preference number: 2 (lower is better)
Translates to: CQGASVTQIQGMELFLVSASCPI*WLNWCF
Trigger: GAAGCACCAGTTCAGCCATCAGATGGGGCAGGATGC...AGATACTAAGAAAAGCTCCATCCCTTGGATCTGAGTTACAGATGCACCTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAAGACCCTCTTCCGAGTaGACTCTCGTCAATTCTCTG +
Preference number: 2 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKRPSSE*TLVNSL
Trigger: CAGAGAATTGACGAGAGTGCACTCGGAAGAGGGTCT...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp TTTTTCTTAATCCCTGTCTACAGCAGACCCTCTCTCTGCAGACATCAGGGCAGTCTCATGGCCTTGCTCTaGTCCTTCCTGGCTGTGTTA +
Preference number: 2 (lower is better)
Translates to: FFLIPVYSRPSLCRHQGSLMALL*SFLAVL
Trigger: TAACACAGCCAGGAAGGAGCAGAGCAAGGCCATGAG...ACTGCCCTGATGTCTGCAGAGAGAGGGTCTGCTGTAGACAGGGATTAAGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp AGGCACCTGGCTCTGGAGTTTGCAGCAACACCCTGTGGTTGTCCAGTGTTAAGAGCTTTTGTCTCCGATTaGACACATCGCATGAATCTC +
Preference number: 2 (lower is better)
Translates to: RHLALEFAATPCGCPVLRAFVSD*THRMNL
Trigger: GAGATTCATGCGATGTGTCCAATCGGAGACAAAAGC...TCTTAACACTGGACAACCACAGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp TTTTTCTTAATCCCTGTCTACAGCAGACCCTCTCTCTGCAGACATCAGGGCAGTAGTGTTTCTTGGCTCTaGCCAGGTCACCTTCCCAGA +
Preference number: 2 (lower is better)
Translates to: FFLIPVYSRPSLCRHQGSSVSWL*PGHLPR
Trigger: TCTGGGAAGGTGACCTGGCCAGAGCCAAGAAACACT...ACTGCCCTGATGTCTGCAGAGAGAGGGTCTGCTGTAGACAGGGATTAAGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GGAGAATGTCCCTTTGGGAGAGAAGCACGTGTGTTAGGGAAATATGCGGGTGAACAACCTCTACCTCCTTaGTTCAAGCAATTCCCCTGC +
Preference number: 2 (lower is better)
Translates to: GECPFGREARVLGKYAGEQPLPP*FKQFPC
Trigger: GCAGGGGAATTGCTTGAACCAAGGAGGTAGAGGTTG...TTCACCCGCATATTTCCCTAACACACGTGCTTCTCTCCCAAAGGGACATTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR-3UTR CCA 90 bp TGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGGAGACCTCTAGAGAAGCCTaGAGGAAATGGGGTAGACAT +
Preference number: 2 (lower is better)
Translates to: CNSATLPGKDVLHPTQKETSREA*RKWGRH
Trigger: ATGTCTACCCCATTTCCTCCAGGCTTCTCTAGAGGT...CTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCGTCAAGGCCACCCGGTaGTGTATTCGCATGCGTATG +
Preference number: 2 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLVKATR*CIRMRM
Trigger: CATACGCATGCGAATACACCACCGGGTGGCCTTGAC...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GGCATTGGAGTAACAGGGTCAGGGTTGATCTTGGACACAGCTGGTGAGATTTCCGCTATGATTATGATTTaGGGGCTGGGCATGACCAAG +
Preference number: 2 (lower is better)
Translates to: GIGVTGSGLILDTAGEISAMIMI*GLGMTK
Trigger: CTTGGTCATGCCCAGCCCCCAAATCATAATCATAGC...GGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CAA 90 bp TTGAATGCATTTACGTTATCTTCCCTAGCAAGAGTCTTCCAGCCTTaGGTACCATCTTCAAACAACAGGGGCCCTGGAGTGAGCCAGGAG +
Preference number: 2 (lower is better)
Translates to: LNAFTLSSLARVFQP*VPSSNNRGPGVSQE
Trigger: CTCCTGGCTCACTCCAGGGCCCCTGTTGTTTGAAGATGGTACCAAAGGCTGGAAGACTCTTGCTAGGGAAGATAACGTAAATGCATTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp TTCTCCACCTTAAGTTTGATGGCAGAAGCCATTTTGCAGAAGGCTGGGTCAAGGTCGAAGGCTGAGTTCTaGGCCACTTCCAACTCACTT +
Preference number: 2 (lower is better)
Translates to: FSTLSLMAEAILQKAGSRSKAEF*ATSNSL
Trigger: AAGTGAGTTGGAAGTGGCTCAGAACTCAGCCTTCGA...CCTTGACCCAGCCTTCTGCAAAATGGCTTCTGCCATCAAACTTAAGGTGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGAAAAATTCTTCTGTTTaGCCAGTGGTGGCAGGAATA +
Preference number: 2 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGKNSSV*PVVAGI
Trigger: TATTCCTGCCACCACTGGGCAAACAGAAGAATTTTT...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp AGGCACCTGGCTCTGGAGTTTGCAGCAACACCCTGTGGTTGTCCAGTGTTAAGAAATTCACTAACTGATTaGTCTGCTTGGGTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: RHLALEFAATPCGCPVLRNSLTD*SAWVSV
Trigger: CACAGACACCCAAGCAGAGCAATCAGTTAGTGAATT...TCTTAACACTGGACAACCACAGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp TTCTCCACCTTAAGTTTGATGGCAGAAGCCATTTTGCAGAAGGCTGGGTCAAGGAGTTTGTGGGAAACCTaGCAATGCTTTCCCTGTGGC +
Preference number: 2 (lower is better)
Translates to: FSTLSLMAEAILQKAGSRSLWET*QCFPCG
Trigger: GCCACAGGGAAAGCATTGGCAGGTTTCCCACAAACT...CCTTGACCCAGCCTTCTGCAAAATGGCTTCTGCCATCAAACTTAAGGTGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp TCCTTCCTCATGGGACTAAGGTGTATAAGTGTTTTGCACAGCCTGCCTCACCCATCTGAAAGTGTTTCTTaGCTCTGGCCAGGTCACCTT +
Preference number: 2 (lower is better)
Translates to: SFLMGLRCISVLHSLPHPSESVS*LWPGHL
Trigger: AAGGTGACCTGGCCAGAGCCAAGAAACACTTTCAGA...TGGGTGAGGCAGGCTGTGCAAAACACTTATACACCTTAGTCCCATGAGGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp CTCTGCAGACATCAGGGCAGTTTGTTATGGGGGAAGAGTCAAGTGAGGATTTCCACTGATTGCTCTGCTTaGGTGTCTGTGTTGGTTCAC +
Preference number: 2 (lower is better)
Translates to: LCRHQGSLLWGKSQVRISTDCSA*VSVLVH
Trigger: GTGAACCAACACAGACACCCAAGCAGAGCAATCAGT...GGAAATCCTCACTTGACTCTTCCCCCATAACAAACTGCCCTGATGTCTGCAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CAA 90 bp CTTAGCACCTGGGTCACGTGCATCCCAAGGGTACCAAGGTCTCCCTaGGAACTTACAGAGAACAGGGGTCATATTATAACTAAAGCGTTT +
Preference number: 2 (lower is better)
Translates to: LSTWVTCIPRVPRSP*ELTENRGHIITKAF
Trigger: AAACGCTTTAGTTATAATATGACCCCTGTTCTCTGTAAGTTCCAAGGGAGACCTTGGTACCCTTGGGATGCACGTGACCCAGGTGCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CAA 90 bp CAGGGGGAATACTCCTTCCTCATGGGACTAAGGTGTATAAGTGTTTaGCACAGCCTGCCTCACCCAGTCCAATGCTCTCATTTTACAGAT +
Preference number: 2 (lower is better)
Translates to: QGEYSFLMGLRCISV*HSLPHPVQCSHFTD
Trigger: ATCTGTAAAATGAGAGCATTGGACTGGGTGAGGCAGGCTGTGCAAAACACTTATACACCTTAGTCCCATGAGGAAGGAGTATTCCCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp TCCTTCCTCATGGGACTAAGGTGTATAAGTGTTTTGCACAGCCTGCCTCACCCAGAGTTGGAGAGAAACTaGTTTTGTCTCCGATTGGAC +
Preference number: 2 (lower is better)
Translates to: SFLMGLRCISVLHSLPHPELERN*FCLRLD
Trigger: GTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTC...TGGGTGAGGCAGGCTGTGCAAAACACTTATACACCTTAGTCCCATGAGGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCTCCTGCTCAAGAACCTaGTGTGGCTGGACTGTACAT +
Preference number: 2 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLSCSRT*CGWTVH
Trigger: ATGTACAGTCCAGCCACAGCAGGTTCTTGAGCAGGA...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GGAGAATGTCCCTTTGGGAGAGAAGCACGTGTGTTAGGGAAATATGCGGGTGAATCCCTGCTTCCCTATTaGGACATGATCTATTCCTCA +
Preference number: 2 (lower is better)
Translates to: GECPFGREARVLGKYAGESLLPY*DMIYSS
Trigger: TGAGGAATAGATCATGTCCCAATAGGGAAGCAGGGA...TTCACCCGCATATTTCCCTAACACACGTGCTTCTCTCCCAAAGGGACATTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR-3UTR TCA 90 bp AAAATCCAGAAATGTGCATATAAAATCTCGCCCTTGGTGTATTGCCTAAGTCAGCGCTTGGTTGTTGAGTaGGGCCTAGAGGAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: KIQKCAYKISPLVYCLSQRLVVE*GLEEQQ
Trigger: CTGCTGCTCCTCTAGGCCTCACTCAACAACCAAGCG...CTGACTTAGGCAATACACCAAGGGCGAGATTTTATATGCACATTTCTGGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp TTCTCCACCTTAAGTTTGATGGCAGAAGCCATTTTGCAGAAGGCTGGGTCAAGGCTCTCGTCAATTCTCTaGTACTTATGTACCTGCAGG +
Preference number: 2 (lower is better)
Translates to: FSTLSLMAEAILQKAGSRLSSIL*YLCTCR
Trigger: CCTGCAGGTACATAAGTAGCAGAGAATTGACGAGAG...CCTTGACCCAGCCTTCTGCAAAATGGCTTCTGCCATCAAACTTAAGGTGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAACTCTTTGGATTATCTaGGTCAGTGAGGATGGAAAC +
Preference number: 2 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKTLWII*VSEDGN
Trigger: GTTTCCATCCTCACTGACGCAGATAATCCAAAGAGT...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp GGAGACATTGGAAACAGAAAAATCCAAAGCTCATGGCCTTGCTCTGCTCCTTCCAGTAAGAGGCACTGCTaGTTAGTAAACAGCCATAGC +
Preference number: 2 (lower is better)
Translates to: GDIGNRKIQSSWPCSAPSSKRHC*LVNSHS
Trigger: GCTATGGCTGTTTACTAACCAGCAGTGCCTCTTACT...GGAAGGAGCAGAGCAAGGCCATGAGCTTTGGATTTTTCTGTTTCCAATGTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp TTTTTCTTAATCCCTGTCTACAGCAGACCCTCTCTCTGCAGACATCAGGGCAGTGCTGAAGTGACTCTTTaGATTATCTGCGTCAGTGAG +
Preference number: 2 (lower is better)
Translates to: FFLIPVYSRPSLCRHQGSAEVTL*IICVSE
Trigger: CTCACTGACGCAGATAATCCAAAGAGTCACTTCAGC...ACTGCCCTGATGTCTGCAGAGAGAGGGTCTGCTGTAGACAGGGATTAAGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp TTTTTCTTAATCCCTGTCTACAGCAGACCCTCTCTCTGCAGACATCAGGGCAGTCTCTTTCCTGTTATGTaGCAAAGGCCAAGTCCTTTT +
Preference number: 2 (lower is better)
Translates to: FFLIPVYSRPSLCRHQGSLFPVM*QRPSPF
Trigger: AAAAGGACTTGGCCTTTGTCACATAACAGGAAAGAG...ACTGCCCTGATGTCTGCAGAGAGAGGGTCTGCTGTAGACAGGGATTAAGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR TCA 90 bp TCCTTCCTCATGGGACTAAGGTGTATAAGTGTTTTGCACAGCCTGCCTCACCCAATTCTGATTTTAATGTaGGCAAGAGCTCATTTGCAC +
Preference number: 2 (lower is better)
Translates to: SFLMGLRCISVLHSLPHPILILM*ARAHLH
Trigger: GTGCAAATGAGCTCTTGCTCACATTAAAATCAGAAT...TGGGTGAGGCAGGCTGTGCAAAACACTTATACACCTTAGTCCCATGAGGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp TTCTCCACCTTAAGTTTGATGGCAGAAGCCATTTTGCAGAAGGCTGGGTCAAGGAAAAATTCTTCTGTTTaGCCAGTGGTGGCAGGAATA +
Preference number: 2 (lower is better)
Translates to: FSTLSLMAEAILQKAGSRKNSSV*PVVAGI
Trigger: TATTCCTGCCACCACTGGGCAAACAGAAGAATTTTT...CCTTGACCCAGCCTTCTGCAAAATGGCTTCTGCCATCAAACTTAAGGTGGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CCA 90 bp TGCCAAGGTGCATCTGTAACTCAGATCCAAGGGATGGAGCTTTTCTTAGTATCTGCTGAAGTGACTCTTTaGATTATCTGCGTCAGTGAG +
Preference number: 2 (lower is better)
Translates to: CQGASVTQIQGMELFLVSAEVTL*IICVSE
Trigger: CTCACTGACGCAGATAATCCAAAGAGTCACTTCAGC...AGATACTAAGAAAAGCTCCATCCCTTGGATCTGAGTTACAGATGCACCTTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR GCA 90 bp TTCTCCACCTTAAGTTTGATGGCAGAAGCCATTTTGCAGAAGGCTGGGTCAAGGACCCTGTCTTTTGAATaGATTTACGTTATCTTCCCT +
Preference number: 2 (lower is better)
Translates to: FSTLSLMAEAILQKAGSRTLSFE*IYVIFP
Trigger: AGGGAAGATAACGTAAATGCATTCAAAAGACAGGGT...CCTTGACCCAGCCTTCTGCAAAATGGCTTCTGCCATCAAACTTAAGGTGGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGATCCAGATCACCCCACTaGGCTGGTGGGGCCGGTGGA +
Preference number: 3 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRSRSPH*AGGAGG
Trigger: TCCACCGGCCCCACCAGCCAAGTGGGGTGATCTGGA...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR-3UTR CAA 90 bp TGGCGAGTGGCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGCTGCAGACCTGGGGGTaGCCCATCCTCAGGAAGGCT +
Preference number: 3 (lower is better)
Translates to: WRVAGPAVDRAPGGPARGLQTWG*PILRKA
Trigger: AGCCTTCCTGAGGATGGGCAACCCCCAGGTCTGCAG...CCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGCCACTCGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374630.8
3UTR TCA 72 bp GGGCACCAGGAGGGCCAGGCTGCCAGGCTGTGCGCGTaGTATGTACCTGGAGCTGCAGACCTGGGGGTTGCC +
Preference number: 3 (lower is better)
Translates to: GHQEGQAARLCA*YVPGAADLGVA
Trigger: GGCAACCCCCAGGTCTGCAGCTCCAGGTACATATCACGCGCACAGCCTGGCAGCCTGGCCCTCCTGGTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 72 bp GGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTaGCGAGTGGCTGGCCCTGCAGTGGATAGAGCACCA +
Preference number: 3 (lower is better)
Translates to: GTAWFFPWPVAS*RVAGPAVDRAP
Trigger: TGGTGCTCTATCCACTGCAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
3UTR CCA 72 bp CACCTGTGCTCTGGGAAGCAGGTTTGCAGGGGGCCATaGCCACTGAGGACCTCGGCCCTGGAGGGTGGAGGG +
Preference number: 3 (lower is better)
Translates to: HLCSGKQVCRGP*PLRTSALEGGG
Trigger: CCCTCCACCCTCCAGGGCCGAGGTCCTCAGTGGCCATGGCCCCCTGCAAACCTGCTTCCCAGAGCACAGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 72 bp CCCTTCTCAGCGGCAGTCGGAGCTGACGGCAGTCACTaGAGTATCAGTCCTCGAGGCAGGGGCTGGCGGGAG +
Preference number: 3 (lower is better)
Translates to: PFSAAVGADGSH*SISPRGRGWRE
Trigger: CTCCCGCCAGCCCCTGCCTCGAGGACTGATACTGCAGTGACTGCCGTCAGCTCCGACTGCCGCTGAGAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 72 bp GGTCACCAGCTCAGCGGCTTAGGACAGGAAGCCATCTaGCGGGAAGCACCGACTGCCAGCCCCATGTGGGGC +
Preference number: 3 (lower is better)
Translates to: GHQLSGLGQEAI*REAPTASPMWG
Trigger: GCCCCACATGGGGCTGGCAGTCGGTGCTTCCCGTCAGATGGCTTCCTGTCCTAAGCCGCTGAGCTGGTGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 72 bp GGTCCAGCTGGAGGCCCCGCCTGGCCAGGTGTTGAGTaGACAGGTCTGGACCATAGCCTTGGGGTCTGTGGG +
Preference number: 3 (lower is better)
Translates to: GPAGGPAWPGVE*TGLDHSLGVCG
Trigger: CCCACAGACCCCAAGGCTATGGTCCAGACCTGTTCACTCAACACCTGGCCAGGCGGGGCCTCCAGCTGGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 72 bp CAGCAGGGCCCCCAAGAGTGTATGTGGTCCTGGCTGTaGCCTCCTCCCTCCTCCCTCTCCTGCTCCCTCTCC +
Preference number: 3 (lower is better)
Translates to: QQGPQECMWSWL*PPPSSLSCSLS
Trigger: GGAGAGGGAGCAGGAGAGGGAGGAGGGAGGAGGTCACAGCCAGGACCACATACACTCTTGGGGGCCCTGCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 72 bp GCATCAGGGCAGCTCCCACCAGAAGGTGACCTTGTGTaGCGAGACAGCTGCCACCCGCGCAGGGCACCTTTG +
Preference number: 3 (lower is better)
Translates to: ASGQLPPEGDLV*RDSCHPRRAPL
Trigger: CAAAGGTGCCCTGCGCGGGTGGCAGCTGTCTCGGCACACAAGGTCACCTTCTGGTGGGAGCTGCCCTGATGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp AGCCCTGAGTCCCTTAAGTGTCTCCTACTGCCCCGCCACCCGGGTCCCTGCTCTCTGCAGACCTGGGGGTaGCCCATCCTCAGGAAGGCT +
Preference number: 3 (lower is better)
Translates to: SPESLKCLLLPRHPGPCSLQTWG*PILRKA
Trigger: AGCCTTCCTGAGGATGGGCAACCCCCAGGTCTGCAG...AGAGCAGGGACCCGGGTGGCGGGGCAGTAGGAGACACTTAAGGGACTCAGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 72 bp ACCAGGCAGCGGGTGGCTCAGAGCTGTGTGCCTGGGTaGGCGGGTGGTGTAAGTGGAAGGCGCTTGGCAACA +
Preference number: 3 (lower is better)
Translates to: TRQRVAQSCVPG*AGGVSGRRLAT
Trigger: TGTTGCCAAGCGCCTTCCACTTACACCACCCGCTCACCCAGGCACACAGCTCTGAGCCACCCGCTGCCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 72 bp TCCACAGAGGGGAAAGCGGCCAGGCTGATGACGGAGTaGTTCACAGGCACCTCTGCCGTGTGGCCTCCCAGC +
Preference number: 3 (lower is better)
Translates to: STEGKAARLMTE*FTGTSAVWPPS
Trigger: GCTGGGAGGCCACACGGCAGAGGTGCCTGTGAATCACTCCGTCATCAGCCTGGCCGCTTTCCCCTCTGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 72 bp GGCTGCCAGGCTGTGCGCGTGATATGTACCTGGAGCTaGAGACCTGGGGGTTGCCCATCCTCAGGAAGGCTG +
Preference number: 3 (lower is better)
Translates to: GCQAVRVICTWS*RPGGCPSSGRL
Trigger: CAGCCTTCCTGAGGATGGGCAACCCCCAGGTCTGCAGCTCCAGGTACATATCACGCGCACAGCCTGGCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 72 bp GGGCCACTGCCGGCCAGTTTGTGGGAAACCTGCCAATaGTTTCCCTGTGGCTTGCCCTGCTGTCCCCATGGG +
Preference number: 3 (lower is better)
Translates to: GPLPASLWETCQ*FPCGLPCCPHG
Trigger: CCCATGGGGACAGCAGGGCAAGCCACAGGGAAAGCATTGGCAGGTTTCCCACAAACTGGCCGGCAGTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 72 bp GCCAGTGGGCCACTGCCGGCCAGTTTGTGGGAAACCTaGCAATGCTTTCCCTGTGGCTTGCCCTGCTGTCCC +
Preference number: 3 (lower is better)
Translates to: ASGPLPASLWET*QCFPCGLPCCP
Trigger: GGGACAGCAGGGCAAGCCACAGGGAAAGCATTGGCAGGTTTCCCACAAACTGGCCGGCAGTGGCCCACTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 72 bp TCAGAGCTGTGTGCCTGGGTGAGCGGGTGGTGTAAGTaGAAGGCGCTTGGCAACATGGCCTGCCACTCCCCG +
Preference number: 3 (lower is better)
Translates to: SELCAWVSGWCK*KALGNMACHSP
Trigger: CGGGGAGTGGCAGGCCATGTTGCCAAGCGCCTTCCACTTACACCACCCGCTCACCCAGGCACACAGCTCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp TGGCGAGTGGCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGAGTTGCATGTTTTCTaGGTGACGTCTCGTGGCTGG +
Preference number: 3 (lower is better)
Translates to: WRVAGPAVDRAPGGPARGELHVF*VTSRGW
Trigger: CCAGCCACGAGACGTCACCAAGAAAACATGCAACTC...CCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGCCACTCGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
3UTR-3UTR CAA 90 bp GGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGGTCCCTGCTTCCCTATaGGGACATGATCTATTCCTC +
Preference number: 3 (lower is better)
Translates to: GWHRLVLPVARGLLASGWVPASL*GHDLFL
Trigger: GAGGAATAGATCATGTCCCAATAGGGAAGCAGGGAC...CCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR-3UTR CAA 90 bp AGCCCTGAGTCCCTTAAGTGTCTCCTACTGCCCCGCCACCCGGGTCCCTGCTCTCACCAGAAGGTGACCTaGTGTGCCGAGACAGCTGCC +
Preference number: 3 (lower is better)
Translates to: SPESLKCLLLPRHPGPCSHQKVT*CAETAA
Trigger: GGCAGCTGTCTCGGCACACAAGGTCACCTTCTGGTG...AGAGCAGGGACCCGGGTGGCGGGGCAGTAGGAGACACTTAAGGGACTCAGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 72 bp AGGAGTGTGCACACTCACTCCCACAGCCCATGGCTCTaGCAGCAGCTCCAGGGAGGCCACGCTCAAAGAGGG +
Preference number: 3 (lower is better)
Translates to: RSVHTHSHSPWL*QQLQGGHAQRG
Trigger: CCCTCTTTGAGCGTGGCCTCCCTGGAGCTGCTGTCAGAGCCATGGGCTGTGGGAGTGAGTGTGCACACTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 72 bp CGTGTGTTAGGGAAATATGCGGGTGAAGGGGTCCTGTaGCTGGTAGAGAGCTGCCTGGGCTTCCCCGGGAGG +
Preference number: 3 (lower is better)
Translates to: RVLGKYAGEGVL*LVESCLGFPGR
Trigger: CCTCCCGGGGAAGCCCAGGCAGCTCTCTACCAGGCACAGGACCCCTTCACCCGCATATTTCCCTAACACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR GCA 72 bp GGGTGGTGTAAGTGGAAGGCGCTTGGCAACATGGCCTaGCACTCCCCGCTGAGCAGCAAGCAAGAGGTTGGG +
Preference number: 3 (lower is better)
Translates to: GWCKWKALGNMA*HSPLSSKQEVG
Trigger: CCCAACCTCTTGCTTGCTGCTCAGCGGGGAGTGGCAGGCCATGTTGCCAAGCGCCTTCCACTTACACCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 72 bp CTATTCCTCACCCTCCAGATCACCCCACTTGGCTGGTaGGGCCGGTGGAGAGGGGGTGCTAAGGTGACAAGC +
Preference number: 3 (lower is better)
Translates to: LFLTLQITPLGW*GRWRGGAKVTS
Trigger: GCTTGTCACCTTAGCACCCCCTCTCCACCGGCCCCACCAGCCAAGTGGGGTGATCTGGAGGGTGAGGAATAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR TCA 72 bp GCCTCCCCCTCCACACCCAAATCTCACTCCAGTCTCTaGATGGCCCAGATGGCCCCATGGCAGTGGGCTTTG +
Preference number: 3 (lower is better)
Translates to: ASPSTPKSHSSL*MAQMAPWQWAL
Trigger: CAAAGCCCACTGCCATGGGGCCATCTGGGCCATTCAGAGACTGGAGTGAGATTTGGGTGTGGAGGGGGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 72 bp GAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATaGTCCGGGTCCTGGCCTCCGATGCAGCCTGGTTTA +
Preference number: 3 (lower is better)
Translates to: ERTLWRAGYHSE*SGSWPPMQPGL
Trigger: TAAACCAGGCTGCATCGGAGGCCAGGACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 72 bp GCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTGTaGACACTCACTCCCACAGCCCATGGCTCTGACAGC +
Preference number: 3 (lower is better)
Translates to: AQAGADTSGEGV*TLTPTAHGSDS
Trigger: GCTGTCAGAGCCATGGGCTGTGGGAGTGAGTGTGCACACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 72 bp GTCTGTGGCCAGATCCCTAGACTGAGGGCGTCCCCATaGCCAAGACCTTTAGGCCCAGCAAAGGTCTGGTGG +
Preference number: 3 (lower is better)
Translates to: VCGQIPRLRASP*PRPLGPAKVWW
Trigger: CCACCAGACCTTTGCTGGGCCTAAAGGTCTTGGCCATGGGGACGCCCTCAGTCTAGGGATCTGGCCACAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp GGCCGCTCCGGGGGCAATTCCTTCTCGGGGAGAGGAGTAGCTGGGAGGCATCCTGTACCAAGGTCTCCCTaGGAACTTACAGAGAACAGG +
Preference number: 3 (lower is better)
Translates to: GRSGGNSFSGRGVAGRHPVPRSP*ELTENR
Trigger: CCTGTTCTCTGTAAGTTCCAAGGGAGACCTTGGTAC...AGGATGCCTCCCAGCTACTCCTCTCCCCGAGAAGGAATTGCCCCCGGAGCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp TGCCCCCTGCCCATCAGAGTCCCTCTCCACAGAGGGGAAAGCGGCCAGGCTGATATGGCAGAAGCCATTTaGCAGAAGGCTGGGTCAAGG +
Preference number: 3 (lower is better)
Translates to: CPLPIRVPLHRGESGQADMAEAI*QKAGSR
Trigger: CCTTGACCCAGCCTTCTGCAAAATGGCTTCTGCCAT...ATCAGCCTGGCCGCTTTCCCCTCTGTGGAGAGGGACTCTGATGGGCAGGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 72 bp GATGCAGGATCAACCCTTCTCAGCGGCAGTCGGAGCTaGCGGCAGTCACTGCAGTATCAGTCCTCGAGGCAG +
Preference number: 3 (lower is better)
Translates to: DAGSTLLSGSRS*RQSLQYQSSRQ
Trigger: CTGCCTCGAGGACTGATACTGCAGTGACTGCCGTCAGCTCCGACTGCCGCTGAGAAGGGTTGATCCTGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 72 bp AAGGCTGGGTCAAGGCCACCCGGTGGTGTATTCGCATaGGTATGTAGCATCACACAGCACAGTGGGGCTCCC +
Preference number: 3 (lower is better)
Translates to: KAGSRPPGGVFA*VCSITQHSGAP
Trigger: GGGAGCCCCACTGTGCTGTGTGATGCTACATACGCATGCGAATACACCACCGGGTGGCCTTGACCCAGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 72 bp CCAGACAGCCCCATACCCTGGTTGAGAGCTCCGGTCTaGATAGCTCAGGCTGGGGCAGACACTTCAGGAGAA +
Preference number: 3 (lower is better)
Translates to: PDSPIPWLRAPV*IAQAGADTSGE
Trigger: TTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGGTATGGGGCTGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 72 bp GGCTGTGCGCGTGATATGTACCTGGAGCTGCAGACCTaGGGGTTGCCCATCCTCAGGAAGGCTGACCTTTCT +
Preference number: 3 (lower is better)
Translates to: GCARDMYLELQT*GLPILRKADLS
Trigger: AGAAAGGTCAGCCTTCCTGAGGATGGGCAACCCCCAGGTCTGCAGCTCCAGGTACATATCACGCGCACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 72 bp CTCTCTCTCTCCTCCAGGAAAAGCCGTGTCTTGGTCTaGGTAGCCGGGCTTGGTAGTGGTGGTGGGGCATCT +
Preference number: 3 (lower is better)
Translates to: LSLSSRKSRVLV*VAGLGSGGGAS
Trigger: AGATGCCCCACCACCACTACCAAGCCCGGCTACCCAGACCAAGACACGGCTTTTCCTGGAGGAGAGAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp TGGCGAGTGGCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGTGCGTGGCTAATTTTTaGCATTTTAGTAGAGACGGG +
Preference number: 3 (lower is better)
Translates to: WRVAGPAVDRAPGGPARGCVANF*HFSRDG
Trigger: CCCGTCTCTACTAAAATGCAAAAAATTAGCCACGCA...CCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGCCACTCGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR-3UTR CAA 90 bp AGCCCTGAGTCCCTTAAGTGTCTCCTACTGCCCCGCCACCCGGGTCCCTGCTCTCTCGCCCTTGGTGTATaGCCTAAGTCAGTAAGCAGA +
Preference number: 3 (lower is better)
Translates to: SPESLKCLLLPRHPGPCSLALGV*PKSVSR
Trigger: TCTGCTTACTGACTTAGGCAATACACCAAGGGCGAG...AGAGCAGGGACCCGGGTGGCGGGGCAGTAGGAGACACTTAAGGGACTCAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp AACCTCCTGAGATTAGCCTCCGAGGGGGTGTGCCCGGAGTTGACTCTCTTTCCTAGGGAAGAGGCATGCTaGCCCGTGTCTCTGAGCGCA +
Preference number: 3 (lower is better)
Translates to: NLLRLASEGVCPELTLFPREEAC*PVSLSA
Trigger: TGCGCTCAGAGACACGGGCAAGCATGCCTCTTCCCT...AGGAAAGAGAGTCAACTCCGGGCACACCCCCTCGGAGGCTAATCTCAGGAGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp GAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTCCAGGCTCAGCTCCTTaGGTGTCTGGCAGCTTTCTC +
Preference number: 3 (lower is better)
Translates to: ESSGLHSSGWGRHFRRRSPGSAP*VSGSFL
Trigger: GAGAAAGCTGCCAGACACCAAAGGAGCTGAGCCTGG...ACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp GGCCGCTCCGGGGGCAATTCCTTCTCGGGGAGAGGAGTAGCTGGGAGGCATCCTGAAAAATTCTTCTGTTaGCCCAGTGGTGGCAGGAAT +
Preference number: 3 (lower is better)
Translates to: GRSGGNSFSGRGVAGRHPEKFFC*PSGGRN
Trigger: ATTCCTGCCACCACTGGGCAAACAGAAGAATTTTTC...AGGATGCCTCCCAGCTACTCCTCTCCCCGAGAAGGAATTGCCCCCGGAGCGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp GGAAACAGGGTTCTGGGAAACCCTGCCAGACAGCCCCATACCCTGGTTGAGAGCCAGAGAAAACCAGAGTaGGCTGTGCCTGGGGGTACA +
Preference number: 3 (lower is better)
Translates to: GNRVLGNPARQPHTLVESQRKPE*AVPGGT
Trigger: TGTACCCCCAGGCACAGCCAACTCTGGTTTTCTCTG...GCTCTCAACCAGGGTATGGGGCTGTCTGGCAGGGTTTCCCAGAACCCTGTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGCACCAGAAGGTGACCTaGTGTGCCGAGACAGCTGCC +
Preference number: 3 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGHQKVT*CAETAA
Trigger: GGCAGCTGTCTCGGCACACAAGGTCACCTTCTGGTG...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp CAGCTGGTGAGATTTCCTTGGTCACAGCAGTGGGGTCCGGAGGAGCCAGGTCTGATGGCAGAAGCCATTTaGCAGAAGGCTGGGTCAAGG +
Preference number: 3 (lower is better)
Translates to: QLVRFPWSQQWGPEEPGLMAEAI*QKAGSR
Trigger: CCTTGACCCAGCCTTCTGCAAAATGGCTTCTGCCAT...CAGACCTGGCTCCTCCGGACCCCACTGCTGTGACCAAGGAAATCTCACCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp AGGCACCTGGCTCTGGAGTTTGCAGCAACACCCTGTGGTTGTCCAGTGTTAAGAGTCTGGACCATAGCCTaGGGGTCTGTGGGGTCTCCC +
Preference number: 3 (lower is better)
Translates to: RHLALEFAATPCGCPVLRVWTIA*GSVGSP
Trigger: GGGAGACCCCACAGACCCCAAGGCTATGGTCCAGAC...TCTTAACACTGGACAACCACAGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 72 bp GTAGGTGGCAGGCAGACCTGGGTATCAGTCCACAGGTaGCTCCAAAGTTGGCCATCTTGCCCCTTGGTCCCT +
Preference number: 3 (lower is better)
Translates to: VGGRQTWVSVHR*LQSWPSCPLVP
Trigger: AGGGACCAAGGGGCAAGATGGCCAACTTTGGAGTCACCTGTGGACTGATACCCAGGTCTGCCTGCCACCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR TCA 72 bp TGGGAGAGAAGCACGTGTGTTAGGGAAATATGCGGGTaGAGGGGTCCTGTGCCTGGTAGAGAGCTGCCTGGG +
Preference number: 3 (lower is better)
Translates to: WERSTCVREICG*RGPVPGRELPG
Trigger: CCCAGGCAGCTCTCTACCAGGCACAGGACCCCTTCACCCGCATATTTCCCTAACACACGTGCTTCTCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR GCA 72 bp TGGATGTTCACTCTGACCGTGGCGCTTCTAGCTGGCTaGCTGTGGCCCGAATCTTTCTCACTGGCCATCTCC +
Preference number: 3 (lower is better)
Translates to: WMFTLTVALLAG*LWPESFSLAIS
Trigger: GGAGATGGCCAGTGAGAAAGATTCGGGCCACAGGCAGCCAGCTAGAAGCGCCACGGTCAGAGTGAACATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 72 bp CCGGAACAGGTGAGTGACAGACGATGGGCTGTGCTGTaGTGGATGTTCACTCTGACCGTGGCGCTTCTAGCT +
Preference number: 3 (lower is better)
Translates to: PEQVSDRRWAVL*WMFTLTVALLA
Trigger: AGCTAGAAGCGCCACGGTCAGAGTGAACATCCAGCACAGCACAGCCCATCGTCTGTCACTCACCTGTTCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 72 bp TTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTaGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTC +
Preference number: 3 (lower is better)
Translates to: FELHVFLVTSRG*HRLVLPVARGL
Trigger: GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
3UTR CCA 72 bp GAGGAAGGGCTGCTTAGAAGAGCAACCCTTAGCACCTaGGTCACGTGCATCCCAAGGGTACCAAGGTCTCCC +
Preference number: 3 (lower is better)
Translates to: EEGLLRRATLST*VTCIPRVPRSP
Trigger: GGGAGACCTTGGTACCCTTGGGATGCACGTGACCCAGGTGCTAAGGGTTGCTCTTCTAAGCAGCCCTTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 72 bp TTCACTCTGACCGTGGCGCTTCTAGCTGGCTGCCTGTaGCCCGAATCTTTCTCACTGGCCATCTCCTCGGAT +
Preference number: 3 (lower is better)
Translates to: FTLTVALLAGCL*PESFSLAISSD
Trigger: ATCCGAGGAGATGGCCAGTGAGAAAGATTCGGGCCACAGGCAGCCAGCTAGAAGCGCCACGGTCAGAGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 72 bp GTGCTGGATGTTCACTCTGACCGTGGCGCTTCTAGCTaGCTGCCTGTGGCCCGAATCTTTCTCACTGGCCAT +
Preference number: 3 (lower is better)
Translates to: VLDVHSDRGASS*LPVARIFLTGH
Trigger: ATGGCCAGTGAGAAAGATTCGGGCCACAGGCAGCCAGCTAGAAGCGCCACGGTCAGAGTGAACATCCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 72 bp GAACAGGTGAGTGACAGACGATGGGCTGTGCTGTGCTaGATGTTCACTCTGACCGTGGCGCTTCTAGCTGGC +
Preference number: 3 (lower is better)
Translates to: EQVSDRRWAVLC*MFTLTVALLAG
Trigger: GCCAGCTAGAAGCGCCACGGTCAGAGTGAACATCCAGCACAGCACAGCCCATCGTCTGTCACTCACCTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 72 bp ACCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTaGGGCAGACACTTCAGGAGAAGGAGTGTGCACACT +
Preference number: 3 (lower is better)
Translates to: TLVESSGLHSSG*GRHFRRRSVHT
Trigger: AGTGTGCACACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp AGGCACCTGGCTCTGGAGTTTGCAGCAACACCCTGTGGTTGTCCAGTGTTAAGACGAGAGGTAGTCTCCTaGGCTCCCCTTCCTCAGCCA +
Preference number: 3 (lower is better)
Translates to: RHLALEFAATPCGCPVLRREVVS*APLPQP
Trigger: TGGCTGAGGAAGGGGAGCCAAGGAGACTACCTCTCG...TCTTAACACTGGACAACCACAGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp GGCCGCTCCGGGGGCAATTCCTTCTCGGGGAGAGGAGTAGCTGGGAGGCATCCTGGAGTGACCTTTCTTTaGACCTCTGTCATTTTCAAG +
Preference number: 3 (lower is better)
Translates to: GRSGGNSFSGRGVAGRHPGVTFL*TSVIFK
Trigger: CTTGAAAATGACAGAGGTCAAAAGAAAGGTCACTCC...AGGATGCCTCCCAGCTACTCCTCTCCCCGAGAAGGAATTGCCCCCGGAGCGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp TGGCCCTGCAGCTTCCTTGCTGCAGGGAGGGAAATTCCACCCCAGATGAGTCCCGCGATGGCAAACATTTaGAGAAATCCCAGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: WPCSFLAAGREIPPQMSPAMANI*RNPRRW
Trigger: CCACCTCCTGGGATTTCTCAAAATGTTTGCCATCGC...GGGACTCATCTGGGGTGGAATTTCCCTCCCTGCAGCAAGGAAGCTGCAGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 72 bp GGGGAGAGGAGTAGCTGGGAGGCATCCTGCCCCATCTaGTGGCTGAACTGGTGCTTCTTCCTAGAACCTGAT +
Preference number: 3 (lower is better)
Translates to: GERSSWEASCPI*WLNWCFFLEPD
Trigger: ATCAGGTTCTAGGAAGAAGCACCAGTTCAGCCATCAGATGGGGCAGGATGCCTCCCAGCTACTCCTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 72 bp CCCCCGAGTCCAGGAATTGCTGTAAACAAACCCAGATaGAGGATCAACCCTTCTCAGCGGCAGTCGGAGCTG +
Preference number: 3 (lower is better)
Translates to: PPSPGIAVNKPR*RINPSQRQSEL
Trigger: CAGCTCCGACTGCCGCTGAGAAGGGTTGATCCTGCATCTGGGTTTGTTTACAGCAATTCCTGGACTCGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 72 bp AACTGCTCACAAGGTGGTGGCAGAGAAGCCCCTAGATaGTGGCAGGGTGGGGACCAACTAGAAATGATGGGG +
Preference number: 3 (lower is better)
Translates to: NCSQGGGREAPR*WQGGDQLEMMG
Trigger: CCCCATCATTTCTAGTTGGTCCCCACCCTGCCACCATCTAGGGGCTTCTCTGCCACCACCTTGTGAGCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp GCAGCTGGTCCCCATTTCCACGGTGCCCTGGCCTGTGTTTACAAGGCAGCTTTCCCTTCCCAGAGGGAGTaGGAGAGAAACTGCTTTTGT +
Preference number: 3 (lower is better)
Translates to: AAGPHFHGALACVYKAAFPSQRE*ERNCFC
Trigger: ACAAAAGCAGTTTCTCTCCAACTCCCTCTGGGAAGG...GAAAGCTGCCTTGTAAACACAGGCCAGGGCACCGTGGAAATGGGGACCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp AGCCCTGAGTCCCTTAAGTGTCTCCTACTGCCCCGCCACCCGGGTCCCTGCTCTTATAAAATCTCGCCCTaGGTGTATTGCCTAAGTCAG +
Preference number: 3 (lower is better)
Translates to: SPESLKCLLLPRHPGPCSYKISP*VYCLSQ
Trigger: CTGACTTAGGCAATACACCAAGGGCGAGATTTTATA...AGAGCAGGGACCCGGGTGGCGGGGCAGTAGGAGACACTTAAGGGACTCAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp ACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCGTCAATAGGGAAGAGGCATGCTaGCCCGTGTCTCTGAGCGCA +
Preference number: 3 (lower is better)
Translates to: TMTAHLTLRPSSECTLVNREEAC*PVSLSA
Trigger: TGCGCTCAGAGACACGGGCAAGCATGCCTCTTCCCT...ATTGACGAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 72 bp GCAGGGGCTCACCCTGATTCCCAGGGCATCGAAGGCTaGGTTCTGAGCCACTTCCAACTCACTTCCTTTGTT +
Preference number: 3 (lower is better)
Translates to: AGAHPDSQGIEG*VLSHFQLTSFV
Trigger: AACAAAGGAAGTGAGTTGGAAGTGGCTCAGAACTCAGCCTTCGATGCCCTGGGAATCAGGGTGAGCCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 72 bp AGTAACAGGGTCAGGGTTGATCTTGGACACAGCTGGTaGGATTTCCTTGGTCACAGCAGTGGGGTCCGGAGG +
Preference number: 3 (lower is better)
Translates to: SNRVRVDLGHSW*DFLGHSSGVRR
Trigger: CCTCCGGACCCCACTGCTGTGACCAAGGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 72 bp GTTGGCCATCTTGCCCCTTGGTCCCTGCTTCCCTATTaGGACATGATCTATTCCTCACCCTCCAGATCACCC +
Preference number: 3 (lower is better)
Translates to: VGHLAPWSLLPY*DMIYSSPSRSP
Trigger: GGGTGATCTGGAGGGTGAGGAATAGATCATGTCCCAATAGGGAAGCAGGGACCAAGGGGCAAGATGGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR CCA 72 bp CCAGCCAAAGTGACCCCAACCCGGAGAATGTCCCTTTaGGAGAGAAGCACGTGTGTTAGGGAAATATGCGGG +
Preference number: 3 (lower is better)
Translates to: PAKVTPTRRMSL*ERSTCVREICG
Trigger: CCCGCATATTTCCCTAACACACGTGCTTCTCTCCCAAAGGGACATTCTCCGGGTTGGGGTCACTTTGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR CCA 72 bp TACTGGGGTCAGAGGCCACTTACTGGCTGTGTGACCTaGGAGAGCCACCATGTCACGTCTCTGAGTTTGCTA +
Preference number: 3 (lower is better)
Translates to: YWGQRPLTGCVT*ESHHVTSLSLL
Trigger: TAGCAAACTCAGAGACGTGACATGGTGGCTCTCCCAGGTCACACAGCCAGTAAGTGGCCTCTGACCCCAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp TGGCCCTGCAGCTTCCTTGCTGCAGGGAGGGAAATTCCACCCCAGATGAGTCCCTTTCCGTCGTTTGAGTaGCATGTTTTCTTGGTGACG +
Preference number: 3 (lower is better)
Translates to: WPCSFLAAGREIPPQMSPFPSFE*HVFLVT
Trigger: CGTCACCAAGAAAACATGCAACTCAAACGACGGAAA...GGGACTCATCTGGGGTGGAATTTCCCTCCCTGCAGCAAGGAAGCTGCAGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374630.8
3UTR-3UTR CAA 90 bp CTCCCGGAACAGGTGAGTGACAGACGATGGGCTGTGCTGTGCTGGATGTTCACTTTGTTGCCTGTGCTTTaGACAAGCCAGGGCCAGAAA +
Preference number: 3 (lower is better)
Translates to: LPEQVSDRRWAVLCWMFTLLPVL*TSQGQK
Trigger: TTTCTGGCCCTGGCTTGTCAAAAGCACAGGCAACAA...AGTGAACATCCAGCACAGCACAGCCCATCGTCTGTCACTCACCTGTTCCGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGATCCAACTCACTTCCTTaGTTGCCTGTGCTTTTGACA +
Preference number: 3 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGSNSLP*LPVLLT
Trigger: TGTCAAAAGCACAGGCAACAAAGGAAGTGAGTTGGA...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTTGGCACTTGGGGAGGTaGAGCCAGGAAAGGATTAGT +
Preference number: 3 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGWHLGR*SQERIS
Trigger: ACTAATCCTTTCCTGGCTCAACCTCCCCAAGTGCCA...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 72 bp ATTCTCTGCTACTTATGTACCTGCAGGGGCTCACCCTaGTTCCCAGGGCATCGAAGGCTGAGTTCTGAGCCA +
Preference number: 3 (lower is better)
Translates to: ILCYLCTCRGSP*FPGHRRLSSEP
Trigger: TGGCTCAGAACTCAGCCTTCGATGCCCTGGGAATCAGGGTGAGCCCCTGCAGGTACATAAGTAGCAGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 72 bp ATGGCCTTGCTCTGCTCCTTCCTGGCTGTGTTACCCTaGGCAAAGTACTTCATCCCCCTGAGCCTCAGTTTC +
Preference number: 3 (lower is better)
Translates to: MALLCSFLAVLP*AKYFIPLSLSF
Trigger: GAAACTGAGGCTCAGGGGGATGAAGTACTTTGCTCAGGGTAACACAGCCAGGAAGGAGCAGAGCAAGGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 72 bp CTGCTTAGAAGAGCAACCCTTAGCACCTGGGTCACGTaGATCCCAAGGGTACCAAGGTCTCCCTTGGAACTT +
Preference number: 3 (lower is better)
Translates to: LLRRATLSTWVT*IPRVPRSPLEL
Trigger: AAGTTCCAAGGGAGACCTTGGTACCCTTGGGATGCACGTGACCCAGGTGCTAAGGGTTGCTCTTCTAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 72 bp TACAAGGCAGCTTTCTTTCCTGCAGTACCAACTGTGTaGAGAGCAGCCGGAAACTCCCCTAACACTGCTGGG +
Preference number: 3 (lower is better)
Translates to: YKAAFFPAVPTV*RAAGNSPNTAG
Trigger: CCCAGCAGTGTTAGGGGAGTTTCCGGCTGCTCTGCACACAGTTGGTACTGCAGGAAAGAAAGCTGCCTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 72 bp ATTCACATCCCTAGTGACAGGAGCAGGCTGCTACCCTaGGGTCATGACGCACTTTCCCTAGCATCATGTGGT +
Preference number: 3 (lower is better)
Translates to: IHIPSDRSRLLP*GHDALSLASCG
Trigger: ACCACATGATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGCAGCCTGCTCCTGTCACTAGGGATGTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 72 bp CATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTaGACCCCACTCAAAAGGAGGGTCTTTGGCCCTTGC +
Preference number: 3 (lower is better)
Translates to: HAILPLYQGKTF*TPLKRRVFGPC
Trigger: GCAAGGGCCAAAGACCCTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 72 bp AATAGGAAGGGGTTCTGCTTCGGAAATATTCCTCAGTaGGGGTCTCCCAAGGCAAATTCCTGGCCCTGCAGC +
Preference number: 3 (lower is better)
Translates to: NRKGFCFGNIPQ*GSPKANSWPCS
Trigger: GCTGCAGGGCCAGGAATTTGCCTTGGGAGACCCCCACTGAGGAATATTTCCGAAGCAGAACCCCTTCCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 72 bp CTATGTCCCAAATGTCAGAGGGAAGGCACCTGGCTCTaGAGTTTGCAGCAACACCCTGTGGTTGTCCAGTGT +
Preference number: 3 (lower is better)
Translates to: LCPKCQREGTWL*SLQQHPVVVQC
Trigger: ACACTGGACAACCACAGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCTTCCCTCTGACATTTGGGACATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp CCATCTCCTCGGATCTGGGAAAGGTCCCGAGAGGTAGTCTCCTTGGCTCCCCTTGAAAAATTCTTCTGTTaGCCCAGTGGTGGCAGGAAT +
Preference number: 3 (lower is better)
Translates to: PSPRIWERSREVVSLAPLEKFFC*PSGGRN
Trigger: ATTCCTGCCACCACTGGGCAAACAGAAGAATTTTTC...AAGGGGAGCCAAGGAGACTACCTCTCGGGACCTTTCCCAGATCCGAGGAGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTGAAGTACTAGATAGATaGGGGCAGGAGAGTGGGAAG +
Preference number: 3 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGEVLDR*GQESGK
Trigger: CTTCCCACTCTCCTGCCCCAATCTATCTAGTACTTC...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 72 bp CCTGACCCAGGAGGACAAAAGCCCCTTTCAGCCCTGTaGGCCAACAGGAGAAACAGTGTCTTTCATTGGAGT +
Preference number: 3 (lower is better)
Translates to: PDPGGQKPLSAL*ANRRNSVFHWS
Trigger: ACTCCAATGAAAGACACTGTTTCTCCTGTTGGCTCACAGGGCTGAAAGGGGCTTTTGTCCTCCTGGGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
3UTR TCA 72 bp GGGGTGTGCCCGGAGTTGACTCTCTTTCCTGTTATGTaGCAAAGGCCAAGTCCTTTTCTGCAGCCAACACTC +
Preference number: 3 (lower is better)
Translates to: GVCPELTLFPVM*QRPSPFLQPTL
Trigger: GAGTGTTGGCTGCAGAAAAGGACTTGGCCTTTGTCACATAACAGGAAAGAGAGTCAACTCCGGGCACACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 72 bp AGAGCTCATTTGCACAGAGAAAACCAGAGTTGGCTGTaGCTGGGGGTACATGAGCACTCTAAGACCCTCACG +
Preference number: 3 (lower is better)
Translates to: RAHLHRENQSWL*LGVHEHSKTLT
Trigger: CGTGAGGGTCTTAGAGTGCTCATGTACCCCCAGGCACAGCCAACTCTGGTTTTCTCTGTGCAAATGAGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 72 bp TCCACAGGTGACTCCAAAGTTGGCCATCTTGCCCCTTaGTCCCTGCTTCCCTATTGGGACATGATCTATTCC +
Preference number: 3 (lower is better)
Translates to: STGDSKVGHLAP*SLLPYWDMIYS
Trigger: GGAATAGATCATGTCCCAATAGGGAAGCAGGGACCAAGGGGCAAGATGGCCAACTTTGGAGTCACCTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR CCA 72 bp CTGATTGGTCTGCCCGAGTCTTCGCAGTTGATATTTTaGATATCATCCCCGAGGGAGAGGACTGCTGAGCAC +
Preference number: 3 (lower is better)
Translates to: LIGLPESSQLIF*ISSPRERTAEH
Trigger: GTGCTCAGCAGTCCTCTCCCTCGGGGATGATATCCAAAATATCAACTGCGAAGACTCGGGCAGACCAATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 72 bp CTCCACTTATATCAACCTTCACTTCCCCCGTTCCACTaGCCCATCCAGACACAACTCCTCACTGTGTTGGAC +
Preference number: 3 (lower is better)
Translates to: LHLYQPSLPPFH*PIQTQLLTVLD
Trigger: GTCCAACACAGTGAGGAGTTGTGTCTGGATGGGCCAGTGGAACGGGGGAAGTGAAGGTTGATATAAGTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 72 bp CTTAAGTTTGATGGCAGAAGCCATTTTGCAGAAGGCTaGGTCAAGGCCACCCGGTGGTGTATTCGCATGCGT +
Preference number: 3 (lower is better)
Translates to: LKFDGRSHFAEG*VKATRWCIRMR
Trigger: ACGCATGCGAATACACCACCGGGTGGCCTTGACCCAGCCTTCTGCAAAATGGCTTCTGCCATCAAACTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp AACCTCCTGAGATTAGCCTCCGAGGGGGTGTGCCCGGAGTTGACTCTCTTTCCTTGCTTTTGTCTCCGATaGGACACATCGCATGAATCT +
Preference number: 3 (lower is better)
Translates to: NLLRLASEGVCPELTLFPCFCLR*DTSHES
Trigger: AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCA...AGGAAAGAGAGTCAACTCCGGGCACACCCCCTCGGAGGCTAATCTCAGGAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTGGAGAGAAACTGCTTTaGTCTCCGATTGGACACATC +
Preference number: 3 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGGEKLL*SPIGHI
Trigger: GATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCC...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp AACCTCCTGAGATTAGCCTCCGAGGGGGTGTGCCCGGAGTTGACTCTCTTTCCTTCCAACTCACTTCCTTaGTTGCCTGTGCTTTTGACA +
Preference number: 3 (lower is better)
Translates to: NLLRLASEGVCPELTLFPSNSLP*LPVLLT
Trigger: TGTCAAAAGCACAGGCAACAAAGGAAGTGAGTTGGA...AGGAAAGAGAGTCAACTCCGGGCACACCCCCTCGGAGGCTAATCTCAGGAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp AGGCACCTGGCTCTGGAGTTTGCAGCAACACCCTGTGGTTGTCCAGTGTTAAGAAGACAGATGGCCTGGTaGGAATCTTCTGGGAATCAC +
Preference number: 3 (lower is better)
Translates to: RHLALEFAATPCGCPVLRRQMAW*ESSGNH
Trigger: GTGATTCCCAGAAGATTCCAACCAGGCCATCTGTCT...TCTTAACACTGGACAACCACAGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCTGCTTTTGTCTCCGATaGGACACATCGCATGAATCT +
Preference number: 3 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPCFCLR*DTSHES
Trigger: AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCA...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000374632.7
3UTR-3UTR CAA 90 bp GAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTGTGGTACCCTGTCTTTaGAATGCATTTACGTTATCT +
Preference number: 3 (lower is better)
Translates to: ESSGLHSSGWGRHFRRRSVVPCL*NAFTLS
Trigger: AGATAACGTAAATGCATTCAAAAGACAGGGTACCAC...ACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCCCAGGCTCAGCTCCTTaGGTGTCTGGCAGCTTTCTC +
Preference number: 3 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLPGSAP*VSGSFL
Trigger: GAGAAAGCTGCCAGACACCAAAGGAGCTGAGCCTGG...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp GGCATTGGAGTAACAGGGTCAGGGTTGATCTTGGACACAGCTGGTGAGATTTCCAGCAACACCCTGTGGTaGTCCAGTGTTAAGACTCTG +
Preference number: 3 (lower is better)
Translates to: GIGVTGSGLILDTAGEISSNTLW*SSVKTL
Trigger: CAGAGTCTTAACACTGGACAACCACAGGGTGTTGCT...GGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 72 bp ACCCACGGCGGTTGGAACCCCAGCTGTATCAGTCCCTaGCCTCCCAACATTGTCAGGAAAACCCATATTTAT +
Preference number: 3 (lower is better)
Translates to: THGGWNPSCISP*PPNIVRKTHIY
Trigger: ATAAATATGGGTTTTCCTGACAATGTTGGGAGGTCAGGGACTGATACAGCTGGGGTTCCAACCGCCGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 72 bp CCCACTCAAAAGGAGGGTCTTTGGCCCTTGCCAAGGTaGATCTGTAACTCAGATCCAAGGGATGGAGCTTTT +
Preference number: 3 (lower is better)
Translates to: PTQKEGLWPLPR*ICNSDPRDGAF
Trigger: AAAAGCTCCATCCCTTGGATCTGAGTTACAGATGCACCTTGGCAAGGGCCAAAGACCCTCCTTTTGAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 72 bp CATCCAGACACAACTCCTCACTGTGTTGGACCATTCTaGCAGCTGCGTCTTGGAGTGACCTTTCTTTTGACC +
Preference number: 3 (lower is better)
Translates to: HPDTTPHCVGPF*QLRLGVTFLLT
Trigger: GGTCAAAAGAAAGGTCACTCCAAGACGCAGCTGCCAGAATGGTCCAACACAGTGAGGAGTTGTGTCTGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp ACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCGTCAATGGAGAGAAACTGCTTTaGTCTCCGATTGGACACATC +
Preference number: 3 (lower is better)
Translates to: TMTAHLTLRPSSECTLVNGEKLL*SPIGHI
Trigger: GATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCC...ATTGACGAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAACTCGCCCTTGGTGTATaGCCTAAGTCAGTAAGCAGA +
Preference number: 3 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKLALGV*PKSVSR
Trigger: TCTGCTTACTGACTTAGGCAATACACCAAGGGCGAG...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp TCCTTCCTCATGGGACTAAGGTGTATAAGTGTTTTGCACAGCCTGCCTCACCCAGAAGTACTAGATAGATaGGGGCAGGAGAGTGGGAAG +
Preference number: 3 (lower is better)
Translates to: SFLMGLRCISVLHSLPHPEVLDR*GQESGK
Trigger: CTTCCCACTCTCCTGCCCCAATCTATCTAGTACTTC...TGGGTGAGGCAGGCTGTGCAAAACACTTATACACCTTAGTCCCATGAGGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 72 bp CACAAGACCCAACCCTGCTGTTCCAAGCAGCTGAAGTaGCTCTTTGGATTATCTGCGTCAGTGAGGATGGAA +
Preference number: 3 (lower is better)
Translates to: HKTQPCCSKQLK*LFGLSASVRME
Trigger: TTCCATCCTCACTGACGCAGATAATCCAAAGAGTCACTTCAGCTGCTTGGAACAGCAGGGTTGGGTCTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 72 bp ATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTaGACTCTCGTCAATTCTCTGCTACTTATGTACCTG +
Preference number: 3 (lower is better)
Translates to: MTAHLTLRPSSE*TLVNSLLLMYL
Trigger: CAGGTACATAAGTAGCAGAGAATTGACGAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 72 bp AACCTGCTGTGGCTGGACTGTACATCACGCCTAAACTaGCTCAACCTCCACTTATATCAACCTTCACTTCCC +
Preference number: 3 (lower is better)
Translates to: NLLWLDCTSRLN*LNLHLYQPSLP
Trigger: GGGAAGTGAAGGTTGATATAAGTGGAGGTTGAGGCAGTTTAGGCGTGATGTACAGTCCAGCCACAGCAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 72 bp AGTGTTAAGACTCTGGCTCTGAATAGGAAGGGGTTCTaGTTCGGAAATATTCCTCAGTGGGGGTCTCCCAAG +
Preference number: 3 (lower is better)
Translates to: SVKTLALNRKGF*FGNIPQWGSPK
Trigger: CTTGGGAGACCCCCACTGAGGAATATTTCCGAAGCAGAACCCCTTCCTATTCAGAGCCAGAGTCTTAACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 72 bp AGACCCTCTCTCTGCAGACATCAGGGCAGTTTGTTATaGGGGAAGAGTCAAGTGAGGATTTCCATGTCTGGA +
Preference number: 3 (lower is better)
Translates to: RPSLCRHQGSLL*GKSQVRISMSG
Trigger: TCCAGACATGGAAATCCTCACTTGACTCTTCCCCCATAACAAACTGCCCTGATGTCTGCAGAGAGAGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 72 bp GCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTaGGTTTGGGCATCCTATCTGAAAATGTCCTGCTTT +
Preference number: 3 (lower is better)
Translates to: ALPPTSWVLICV*VWASYLKMSCF
Trigger: AAAGCAGGACATTTTCAGATAGGATGCCCAAACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCGAGTTGCATGTTTTCTaGGTGACGTCTCGTGGCTGG +
Preference number: 3 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLELHVF*VTSRGW
Trigger: CCAGCCACGAGACGTCACCAAGAAAACATGCAACTC...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
3UTR-3UTR CAA 90 bp GGAGACATTGGAAACAGAAAAATCCAAAGCTCATGGCCTTGCTCTGCTCCTTCCGTACCAAGGTCTCCCTaGGAACTTACAGAGAACAGG +
Preference number: 3 (lower is better)
Translates to: GDIGNRKIQSSWPCSAPSVPRSP*ELTENR
Trigger: CCTGTTCTCTGTAAGTTCCAAGGGAGACCTTGGTAC...GGAAGGAGCAGAGCAAGGCCATGAGCTTTGGATTTTTCTGTTTCCAATGTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTGTGGTACCCTGTCTTTaGAATGCATTTACGTTATCT +
Preference number: 3 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGVVPCL*NAFTLS
Trigger: AGATAACGTAAATGCATTCAAAAGACAGGGTACCAC...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 72 bp CTTGTTATATCAGCTTTCTCAAGGCAGCCTTCATGCTaGGAAGCTAAACTCAGACAGACTCTGGGTCTGAGG +
Preference number: 3 (lower is better)
Translates to: LVISAFSRQPSC*EAKLRQTLGLR
Trigger: CCTCAGACCCAGAGTCTGTCTGAGTTTAGCTTCGCAGCATGAAGGCTGCCTTGAGAAAGCTGATATAACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 72 bp CTCTGGTCCAGCACTCAGGCCATCATCTATTCTGATTaGTCTGCCCGAGTCTTCGCAGTTGATATTTTGGAT +
Preference number: 3 (lower is better)
Translates to: LWSSTQAIIYSD*SARVFAVDILD
Trigger: ATCCAAAATATCAACTGCGAAGACTCGGGCAGACCAATCAGAATAGATGATGGCCTGAGTGCTGGACCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 72 bp AGAGGAGACATTGGAAACAGAAAAATCCAAAGCTCATaGCCTTGCTCTGCTCCTTCCTGGCTGTGTTACCCT +
Preference number: 3 (lower is better)
Translates to: RGDIGNRKIQSS*PCSAPSWLCYP
Trigger: AGGGTAACACAGCCAGGAAGGAGCAGAGCAAGGCCATGAGCTTTGGATTTTTCTGTTTCCAATGTCTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 72 bp CATATGGTAAGTATTCAGCGATTATTGCAATCCCTGTaGTTCCAACCTCCTGAGATTAGCCTCCGAGGGGGT +
Preference number: 3 (lower is better)
Translates to: HMVSIQRLLQSL*FQPPEISLRGG
Trigger: ACCCCCTCGGAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACTTACCATATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 72 bp CAGATGGCCTGGTTGGAATCTTCTGGGAATCACCTCTaGGAATCAGTTTCCTCACTCATAAAGTGGAGAGGA +
Preference number: 3 (lower is better)
Translates to: QMAWLESSGNHL*ESVSSLIKWRG
Trigger: TCCTCTCCACTTTATGAGTGAGGAAACTGATTCCCAGAGGTGATTCCCAGAAGATTCCAACCAGGCCATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCCCTTCCCAGAGGGAGTaGGAGAGAAACTGCTTTTGT +
Preference number: 3 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLPSQRE*ERNCFC
Trigger: ACAAAAGCAGTTTCTCTCCAACTCCCTCTGGGAAGG...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCTTGTTGCCTGTGCTTTaGACAAGCCAGGGCCAGAAA +
Preference number: 3 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLLLPVL*TSQGQK
Trigger: TTTCTGGCCCTGGCTTGTCAAAAGCACAGGCAACAA...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp TTCTCCACCTTAAGTTTGATGGCAGAAGCCATTTTGCAGAAGGCTGGGTCAAGGAGAGTCTTCCAGCCTTaGGTACCATCTTCAAACAAC +
Preference number: 3 (lower is better)
Translates to: FSTLSLMAEAILQKAGSRRVFQP*VPSSNN
Trigger: GTTGTTTGAAGATGGTACCAAAGGCTGGAAGACTCT...CCTTGACCCAGCCTTCTGCAAAATGGCTTCTGCCATCAAACTTAAGGTGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR-3UTR CAA 90 bp CTCTGCAGACATCAGGGCAGTTTGTTATGGGGGAAGAGTCAAGTGAGGATTTCCCTTTCTTTTCTCTTATaGGCCAGCATCAGACACCAA +
Preference number: 3 (lower is better)
Translates to: LCRHQGSLLWGKSQVRISLSFLL*ASIRHQ
Trigger: TTGGTGTCTGATGCTGGCCAATAAGAGAAAAGAAAG...GGAAATCCTCACTTGACTCTTCCCCCATAACAAACTGCCCTGATGTCTGCAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 72 bp TTTTTCTTAATCCCTGTCTACAGCAGACCCTCTCTCTaGAGACATCAGGGCAGTTTGTTATGGGGGAAGAGT +
Preference number: 3 (lower is better)
Translates to: FFLIPVYSRPSL*RHQGSLLWGKS
Trigger: ACTCTTCCCCCATAACAAACTGCCCTGATGTCTGCAGAGAGAGGGTCTGCTGTAGACAGGGATTAAGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 72 bp TTAGGCAAGACATTGTGTATAAAAAGTTGGGCACGGTaGCTGGCACATTGCTGGCACTCAAGAAATAGCAGC +
Preference number: 3 (lower is better)
Translates to: LGKTLCIKSWAR*LAHCWHSRNSS
Trigger: GCTGCTATTTCTTGAGTGCCAGCAATGTGCCAGGCACCGTGCCCAACTTTTTATACACAATGTCTTGCCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 72 bp ACAGCCCCAGCCCACTTGAGCTTTCTTTTCTCTTATTaGCCAGCATCAGACACCAACTGTTTCTCATCATCT +
Preference number: 3 (lower is better)
Translates to: TAPAHLSFLFSY*PASDTNCFSSS
Trigger: AGATGATGAGAAACAGTTGGTGTCTGATGCTGGCCAATAAGAGAAAAGAAAGCTCAAGTGGGCTGGGGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 72 bp TCCTCACTGTGTTGGACCATTCTGGCAGCTGCGTCTTaGAGTGACCTTTCTTTTGACCTCTGTCATTTTCAA +
Preference number: 3 (lower is better)
Translates to: SSLCWTILAAAS*SDLSFDLCHFQ
Trigger: TTGAAAATGACAGAGGTCAAAAGAAAGGTCACTCCAAGACGCAGCTGCCAGAATGGTCCAACACAGTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 72 bp GAGCCACCATGTCACGTCTCTGAGTTTGCTAGTCTGTaGAATGGGAGTAATAATTGTACCTGTCTCACAGAG +
Preference number: 3 (lower is better)
Translates to: EPPCHVSEFASL*NGSNNCTCLTE
Trigger: CTCTGTGAGACAGGTACAATTATTACTCCCATTCCACAGACTAGCAAACTCAGAGACGTGACATGGTGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 72 bp CCTCCTCCTGCCACGTGGACAATTCTGATTTTAATGTaGGCAAGAGCTCATTTGCACAGAGAAAACCAGAGT +
Preference number: 3 (lower is better)
Translates to: PPPATWTILILM*ARAHLHRENQS
Trigger: ACTCTGGTTTTCTCTGTGCAAATGAGCTCTTGCTCACATTAAAATCAGAATTGTCCACGTGGCAGGAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CCA 72 bp ATGGAGGTTAAGATCACAAGCTGGAGCCAGACTTCTTaGGTTCAAATCCTGGCTCTAGTATATATGACCTCT +
Preference number: 3 (lower is better)
Translates to: MEVKITSWSQTS*VQILALVYMTS
Trigger: AGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAAGTCTGGCTCCAGCTTGTGATCTTAACCTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
3UTR-3UTR CAA 90 bp TGCCAAGGTGCATCTGTAACTCAGATCCAAGGGATGGAGCTTTTCTTAGTATCTAGTATTCAGCGATTATaGCAATCCCTGTGGTTCCAA +
Preference number: 3 (lower is better)
Translates to: CQGASVTQIQGMELFLVSSIQRL*QSLWFQ
Trigger: TTGGAACCACAGGGATTGCAATAATCGCTGAATACT...AGATACTAAGAAAAGCTCCATCCCTTGGATCTGAGTTACAGATGCACCTTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR GCA 72 bp CTAAAGCGTTTATTTCCATTCAATTCACTAACTGATTaGTCTGCTTGGGTGTCTGTGTTGGTTCACAGGAGG +
Preference number: 3 (lower is better)
Translates to: LKRLFPFNSLTD*SAWVSVLVHRR
Trigger: CCTCCTGTGAACCAACACAGACACCCAAGCAGAGCAATCAGTTAGTGAATTGAATGGAAATAAACGCTTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 72 bp AATGGGAGTAATAATTGTACCTGTCTCACAGAGGTGTaGGGATTAGGCAAGACATTGTGTATAAAAAGTTGG +
Preference number: 3 (lower is better)
Translates to: NGSNNCTCLTEV*GLGKTLCIKSW
Trigger: CCAACTTTTTATACACAATGTCTTGCCTAATCCTCACACCTCTGTGAGACAGGTACAATTATTACTCCCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR TCA 72 bp TTAGAAACATGGAATCATTCCATTGGAATCTTAGAATaGTGGGGTTTTGCAATCCTAGAATCTTGGAATCTT +
Preference number: 3 (lower is better)
Translates to: LETWNHSIGILE*WGFAILESWNL
Trigger: AAGATTCCAAGATTCTAGGATTGCAAAACCCCATCATTCTAAGATTCCAATGGAATGATTCCATGTTTCTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCTGTGGCCCGTGGCCTCCTaGCGAGTGGCTGGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: APLGSSRGPWPPGEWLALWPVAS*RVAGPA
Trigger: TGCAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCA...CAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCACAGGGGCCCTGGAGTaGGCCAGGAGTGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGTGALE*ARSGPG
Trigger: CCCTGGGCCACTCCTGGCTCACTCCAGGGCCCCTGT...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CCA 90 bp GGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGTCCACGTGGATGCGGTaGGCGCCACGGCGCCGGATA +
Preference number: 4 (lower is better)
Translates to: GWHRLVLPVARGLLASGWSTWMR*APRRRI
Trigger: TATCCGGCGCCGTGGCGCCCACCGCATCCACGTGGA...CCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp GGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCAGCCACCAGCGATGTaGTCTCAGCCCCCGACAGGG +
Preference number: 4 (lower is better)
Translates to: GWHRLVLPVARGLLASGWQPPAM*SQPPTG
Trigger: CCCTGTCGGGGGCTGAGAGCACATCGCTGGTGGCTG...CCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp GTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTCATTGGCGATGCAGCTaGCCCGGGCAGCCACCAGCG +
Preference number: 4 (lower is better)
Translates to: VAGTAWFFPWPVASWRVAHWRCS*PGQPPA
Trigger: CGCTGGTGGCTGCCCGGGGCAGCTGCATCGCCAATG...AGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp GTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGTAGCGCCCGTAACCTaGCACGGTGCGTGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: VAGTAWFFPWPVASWRVAVAPVT*HGACPH
Trigger: GTGCGGGCACGCACCGTGGCAGGTTACGGGCGCTAC...AGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGATCCACGTGGATGCGGTaGGCGCCACGGCGCCGGATA +
Preference number: 4 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRSTWMR*APRRRI
Trigger: TATCCGGCGCCGTGGCGCCCACCGCATCCACGTGGA...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGCAGAGGGGCCAGGATCACGCCATTaGGCTGGTCCGGCTGGGACC +
Preference number: 4 (lower is better)
Translates to: AGPAVDRAPGGPARGAEGPGSRH*AGPAGT
Trigger: GGTCCCAGCCGGACCAGCCCAATGGCGTGATCCTGG...CCCCTCTGCCCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCTGGTGGGGCCGGTaGAGAGGGGGTGCTAAGGTG +
Preference number: 4 (lower is better)
Translates to: VAGTAWFFPWPVASWRVAGWWGR*RGGAKV
Trigger: CACCTTAGCACCCCCTCTCCACCGGCCCCACCAGCC...AGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp CTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCATCACCCCACTTGGCTaGTGGGGCCGGTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LAPLGSSRGPWPPGEWLAITPLG*WGRWRG
Trigger: CCCTCTCCACCGGCCCCACCAGCCAAGTGGGGTGAT...GGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp GTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTTCTTCCCGTGGCCCGTaGCCTCCTGGCGAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VAGTAWFFPWPVASWRVASSRGP*PPGEWL
Trigger: CAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGA...AGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCTGGTGGCTGGCACCGCTTaGTTCTTCCCGTGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: APLGSSRGPWPPGEWLALVAGTA*FFPWPV
Trigger: CACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC...CAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp GCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCTGTGGCGCCATTCTGGATaGTGCGGGGGCACTTGCGGT +
Preference number: 4 (lower is better)
Translates to: APLGSSRGPWPPGEWLALWRHSG*CGGTCG
Trigger: ACCGCAAGTGCCCCCGCATCATCCAGAATGGCGCCA...CAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp GCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGCAGAGGGGGGGGCGCCATGGCTTTaGGGCTGTTGGGATTGCGGA +
Preference number: 4 (lower is better)
Translates to: AGPAVDRAPGGPARGAEGGAPWL*GCWDCG
Trigger: TCCGCAATCCCAACAGCCTCAAAGCCATGGCGCCCC...CCCCTCTGCCCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGC
69% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp GGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGTCCCCGCGTTCTCCCTaGCCCAGGAGGACAAAAGCC +
Preference number: 4 (lower is better)
Translates to: GWHRLVLPVARGLLASGWSPRSP*PRRTKA
Trigger: GGCTTTTGTCCTCCTGGGTCAGGGAGAACGCGGGGA...CCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGACAGGCACGCTGGGGATaGTGCTGCAGTCACGCACCG +
Preference number: 4 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRQARWG*CCSHAP
Trigger: CGGTGCGTGACTGCAGCAGCATCCCCAGCGTGCCTG...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGACTTCCGCATTGGCGATaGAGCTGCCCCGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRLPHWR*SCPGQP
Trigger: TGGCTGCCCGGGGCAGCTGCATCGCCAATGCGGAAG...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp GCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCTGCCGGCTTTGAGGCCCTaGACGGTGACCGTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: APLGSSRGPWPPGEWLALPALRP*TVTVLV
Trigger: CACCAACACGGTCACCGTGCAGGGCCTCAAAGCCGG...CAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp GCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCTGCGTAACCTGCCACGGTaGGTGCCCGCACCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: APLGSSRGPWPPGEWLALRNLPR*VPAPGR
Trigger: TCTTCCAGGTGCGGGCACGCACCGTGGCAGGTTACG...CAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp GGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGTGTAGTCGGGGATCGTaGGGTCCAGCAGCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GWHRLVLPVARGLLASGWCSRGS*GPAAAG
Trigger: ACCTGCCGCTGCTGGACCGCACGATCCCCGACTACA...CCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTCCACCTCTTCCGCATTaGCGATGCAGCTGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: VAGTAWFFPWPVASWRVAPPLPH*RCSCPG
Trigger: CCCGGGGCAGCTGCATCGCCAATGCGGAAGAGGTGG...AGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCCCAGGATCACGCCATTaGGCTGGTCCGGCTGGGACC +
Preference number: 4 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGPGSRH*AGPAGT
Trigger: GGTCCCAGCCGGACCAGCCCAATGGCGTGATCCTGG...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGCAGAGGGGTTCCGCCCAGGGCACTaGTGTAGGTGGGGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: AGPAVDRAPGGPARGAEGFRPGH*CRWGLR
Trigger: CCTCAGACCCCACCTACACCAGTGCCCTGGGCGGAA...CCCCTCTGCCCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp CTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCTGGCTGGCCCTGCAGTaGATAGAGCACCAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LAPLGSSRGPWPPGEWLAWLALQ*IEHQEG
Trigger: GCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGCCA...GGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp AGCCCTGAGTCCCTTAAGTGTCTCCTACTGCCCCGCCACCCGGGTCCCTGCTCTAGGGGCTGGCGGGAGTaGGCACCAGGAGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SPESLKCLLLPRHPGPCSRGWRE*APGGPG
Trigger: GCCTGGCCCTCCTGGTGCCCACTCCCGCCAGCCCCT...AGAGCAGGGACCCGGGTGGCGGGGCAGTAGGAGACACTTAAGGGACTCAGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCACTGCCAGCCCCATGTaGGGCCCCAGAACAGTTGGG +
Preference number: 4 (lower is better)
Translates to: LAPLGSSRGPWPPGEWLATASPM*GPRTVG
Trigger: CCCAACTGTTCTGGGGCCCCACATGGGGCTGGCAGT...GGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CCA 90 bp GGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGGGCAGGAGGATTAACTaGGCAGGGCGGGAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: GWHRLVLPVARGLLASGWGRRIN*AGRELP
Trigger: TGGGAGCTCCCGCCCTGCCCAGTTAATCCTCCTGCC...CCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR TCA 90 bp GTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTAGACACGCACGGCGATaGGGGACATGCAGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: VAGTAWFFPWPVASWRVARHARR*GTCSRH
Trigger: ATGGCGGCTGCATGTCCCTCATCGCCGTGCGTGTCT...AGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCTGGCGCCATTCTGGATaGTGCGGGGGCACTTGCGGT +
Preference number: 4 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGWRHSG*CGGTCG
Trigger: ACCGCAAGTGCCCCCGCATCATCCAGAATGGCGCCA...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp CTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCAGCAGCGGCAGGTTaGTGCCAGAGGAGAGGGGCG +
Preference number: 4 (lower is better)
Translates to: LGDVSWLAPLGSSRGPWPPAAAG*CQRRGA
Trigger: CGCCCCTCTCCTCTGGCATCAACCTGCCGCTGCTGG...AGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp CTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCCCGGAACAGGTGAGTaGCAGACGATGGGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LAPLGSSRGPWPPGEWLAPGTGE*QTMGCA
Trigger: AGCACAGCCCATCGTCTGTCACTCACCTGTTCCGGG...GGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR TCA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGGACAGGAAGCCATCTaGCGGGAAGCACCGACTGCC +
Preference number: 4 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGGQEAI*REAPTA
Trigger: GGCAGTCGGTGCTTCCCGTCAGATGGCTTCCTGTCC...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR GCA 90 bp CTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTTCATCTCCACGTGGATaGGGTGGGCGCCACGGCGCC +
Preference number: 4 (lower is better)
Translates to: LGDVSWLAPLGSSRGPWPSSPRG*GGRHGA
Trigger: GGCGCCGTGGCGCCCACCGCATCCACGTGGAGATGA...AGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGACCAGGTAGAAGCCGCTaGGGGACACAGGTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRPGRSR*GTQVRS
Trigger: GCTTCGGACCTGTGTCCCGCAGCGGCTTCTACCTGG...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp GGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTCAGCCACCAGCGATGTaGTCTCAGCCCCCGACAGGG +
Preference number: 4 (lower is better)
Translates to: GDVSWLAPLGSSRGPWPPQPPAM*SQPPTG
Trigger: CCCTGTCGGGGGCTGAGAGCACATCGCTGGTGGCTG...AGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp GCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCTGCCTCGAAGCCTGCTTTaGACATGCAGCGCCCGATGG +
Preference number: 4 (lower is better)
Translates to: APLGSSRGPWPPGEWLALPRSLL*TCSARW
Trigger: CCATCGGGCGCTGCATGTGCAAAGCAGGCTTCGAGG...CAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp GCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGCAGAGGGGCCTCGAAGCCTGCTTTaGACATGCAGCGCCCGATGG +
Preference number: 4 (lower is better)
Translates to: AGPAVDRAPGGPARGAEGPRSLL*TCSARW
Trigger: CCATCGGGCGCTGCATGTGCAAAGCAGGCTTCGAGG...CCCCTCTGCCCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp GTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTCGGAGGGGATGGTTGTaGAGGGCATGTCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: VAGTAWFFPWPVASWRVARRGWL*RACPGG
Trigger: ACCCCCTGGACATGCCCTGCACAACCATCCCCTCCG...AGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp CTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCACCTGCCACGGTGCGTaGCCGCACCTGGAAGACATA +
Preference number: 4 (lower is better)
Translates to: LAPLGSSRGPWPPGEWLATCHGA*PHLEDI
Trigger: TATGTCTTCCAGGTGCGGGCACGCACCGTGGCAGGT...GGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp GTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTCGTAACCTGCCACGGTaGGTGCCCGCACCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: VAGTAWFFPWPVASWRVARNLPR*VPAPGR
Trigger: TCTTCCAGGTGCGGGCACGCACCGTGGCAGGTTACG...AGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp CTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCGCTTCAGGTGGCCACTaGAGACCTCGCCAAACTCCC +
Preference number: 4 (lower is better)
Translates to: LAPLGSSRGPWPPGEWLAASGGH*RPRQTP
Trigger: GGGAGTTTGGCGAGGTCTGCAGTGGCCACCTGAAGC...GGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp GGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGGCTTCAGGTGGCCACTaGAGACCTCGCCAAACTCCC +
Preference number: 4 (lower is better)
Translates to: GWHRLVLPVARGLLASGWASGGH*RPRQTP
Trigger: GGGAGTTTGGCGAGGTCTGCAGTGGCCACCTGAAGC...CCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp TGGCGAGTGGCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGTGTAGTCGGGGATCGTaGGGTCCAGCAGCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: WRVAGPAVDRAPGGPARGCSRGS*GPAAAG
Trigger: ACCTGCCGCTGCTGGACCGCACGATCCCCGACTACA...CCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGCCACTCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp GCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGCAGAGGGGTGCAGACCTGGGGGTTaGCCATCCTCAGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: AGPAVDRAPGGPARGAEGCRPGG*PSSGRL
Trigger: CAGCCTTCCTGAGGATGGGCAACCCCCAGGTCTGCA...CCCCTCTGCCCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR GCA 90 bp TTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCGTGTGCCGAGACAGCTaGCACCCGCGCAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: LVTSRGWHRLVLPVARGLVCRDS*HPRRAP
Trigger: AGGTGCCCTGCGCGGGTGGCAGCTGTCTCGGCACAC...GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR GCA 90 bp GGCCGCTCCGGGGGCAATTCCTTCTCGGGGAGAGGAGTAGCTGGGAGGCATCCTACGGGAAGCACCGACTaGCAGCCCCATGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GRSGGNSFSGRGVAGRHPTGSTD*QPHVGP
Trigger: GGGCCCCACATGGGGCTGGCAGTCGGTGCTTCCCGT...AGGATGCCTCCCAGCTACTCCTCTCCCCGAGAAGGAATTGCCCCCGGAGCGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GGCCGCTCCGGGGGCAATTCCTTCTCGGGGAGAGGAGTAGCTGGGAGGCATCCTCGCCACCCGGGTCCCTaGTCTGAGGCCTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: GRSGGNSFSGRGVAGRHPRHPGP*SEASGP
Trigger: TGGACCAGAGGCCTCAGAGCAGGGACCCGGGTGGCG...AGGATGCCTCCCAGCTACTCCTCTCCCCGAGAAGGAATTGCCCCCGGAGCGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGCAGAGGGGAACTTCATCTCCACGTaGATGCGGTGGGCGCCACGG +
Preference number: 4 (lower is better)
Translates to: AGPAVDRAPGGPARGAEGNFIST*MRWAPR
Trigger: CCGTGGCGCCCACCGCATCCACGTGGAGATGAAGTT...CCCCTCTGCCCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTATCACGCCATTGGGCTaGTCCGGCTGGGACCACGAC +
Preference number: 4 (lower is better)
Translates to: VAGTAWFFPWPVASWRVAITPLG*SGWDHD
Trigger: GTCGTGGTCCCAGCCGGACCAGCCCAATGGCGTGAT...AGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTTGGCCTCCTGGCGAGTaGCTGGCCCTGCAGTGGATA +
Preference number: 4 (lower is better)
Translates to: VAGTAWFFPWPVASWRVAWPPGE*LALQWI
Trigger: TATCCACTGCAGGGCCAGCCACTCGCCAGGAGGCCA...AGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp CTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTCCTGGCAGGGGCTGGCGGGAGTaGGCACCAGGAGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LSAPSGGQGITVNDPGPGRGWRE*APGGPG
Trigger: GCCTGGCCCTCCTGGTGCCCACTCCCGCCAGCCCCT...GCCAGGACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCACCTCTTCCCACCCTaGTGGAGGATGCACCATCCA +
Preference number: 4 (lower is better)
Translates to: LAPLGSSRGPWPPGEWLAHLFPP*WRMHHP
Trigger: TGGATGGTGCATCCTCCATCAGGGTGGGAAGAGGTG...GGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp TGGCGAGTGGCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGGGCCAGCAGGTCACTaGTGTAAATGCGTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: WRVAGPAVDRAPGGPARGGPAGH*CKCVAR
Trigger: CCGAGCCACGCATTTACATCAGTGACCTGCTGGCCC...CCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGCCACTCGCCA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCTTCACAGAGGCGAACTaGGGCGAGAAGGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGFTEAN*GEKGLW
Trigger: CCAGAGCCCCTTCTCGCCTCAGTTCGCCTCTGTGAA...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCCGACGTCAAAGGAGGTaGAGCCGGCATTGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGRRQRR*SRHWRS
Trigger: GCTTCGCCAATGCCGGCTTCACCTCCTTTGACGTCG...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp GTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGTGGCCAGCCAAAGTaGCCCCAACCCGGAGAATGT +
Preference number: 4 (lower is better)
Translates to: VAGTAWFFPWPVASWRVAGGQPK*PQPGEC
Trigger: ACATTCTCCGGGTTGGGGTCACTTTGGCTGGCCACC...AGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp GCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCTGGCTTGGAGGAAGAGGTaGGCCGAGGCAGGTGAATGT +
Preference number: 4 (lower is better)
Translates to: APLGSSRGPWPPGEWLALAWRKR*AEAGEC
Trigger: ACATTCACCTGCCTCGGCTCACCTCTTCCTCCAAGC...CAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGGCAGGGTATCACAGTaGATGATCCGGGTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGGRVSQ*MIRVLA
Trigger: GGCCAGGACCCGGATCATTCACTGTGATACCCTGCC...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR TCA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGCTCCCACCAGAAGGTaGCCTTGTGTGCCGAGACAG +
Preference number: 4 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRAPTRR*PCVPRQ
Trigger: CTGTCTCGGCACACAAGGTCACCTTCTGGTGGGAGC...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR TCA 90 bp CTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCCAGCCTTTTGGAGATaGGCCCCTGATGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LAPLGSSRGPWPPGEWLAPAFWR*APDGRG
Trigger: TCCTCTCCCATCAGGGGCTCATCTCCAAAAGGCTGG...GGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR TCA 90 bp GCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCTGAGGCTGATGACGGAGTaGTTCACAGGCACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: APLGSSRGPWPPGEWLALRLMTE*FTGTSA
Trigger: GGCAGAGGTGCCTGTGAATCACTCCGTCATCAGCCT...CAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR TCA 90 bp GGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGGACTGGCAAAGGATCTaGCAGTGGAGAGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GWHRLVLPVARGLLASGWDWQRI*QWRGAE
Trigger: CTCAGCCCCTCTCCACTGTCAGATCCTTTGCCAGTC...CCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR GCA 90 bp CTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCACCCTGATGGAGGATaGACCATCCAGCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LAPLGSSRGPWPPGEWLAHPDGG*TIQPSS
Trigger: TGAGCTGGGCTGGATGGTGCATCCTCCATCAGGGTG...GGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGCACGCTGGGGATGCTaGTGCAGTCACGCACCGAAA +
Preference number: 4 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRARWGC*CSHAPK
Trigger: TTTCGGTGCGTGACTGCAGCAGCATCCCCAGCGTGC...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCCCTCGAAGCCTGCTTTaGACATGCAGCGCCCGATGG +
Preference number: 4 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGPRSLL*TCSARW
Trigger: CCATCGGGCGCTGCATGTGCAAAGCAGGCTTCGAGG...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp CTATTCCTCACCCTCCAGATCACCCCACTTGGCTGGTGGGGCCGGTGGAGAGGGGTAGCGCCCGTAACCTaGCACGGTGCGTGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: LFLTLQITPLGWWGRWRGVAPVT*HGACPH
Trigger: GTGCGGGCACGCACCGTGGCAGGTTACGGGCGCTAC...CCCTCTCCACCGGCCCCACCAGCCAAGTGGGGTGATCTGGAGGGTGAGGAATAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR GCA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCAGGCATGAGCCACTGTaGCCGGCTGCCAGCTTGCAT +
Preference number: 4 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGRHEPL*PAASLH
Trigger: ATGCAAGCTGGCAGCCGGGCACAGTGGCTCATGCCT...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR GCA 90 bp TGGCGAGTGGCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGCCTCCGAGGGGGTGTaGCCGGAGTTGACTCTCTTT +
Preference number: 4 (lower is better)
Translates to: WRVAGPAVDRAPGGPARGASEGV*PELTLF
Trigger: AAAGAGAGTCAACTCCGGGCACACCCCCTCGGAGGC...CCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGCCACTCGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CCA 90 bp GCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCTGGGCGAGAAGGGGCTCTaGTCAGTAACGCCGTTCACA +
Preference number: 4 (lower is better)
Translates to: APLGSSRGPWPPGEWLALGEKGL*SVTPFT
Trigger: TGTGAACGGCGTTACTGACCAGAGCCCCTTCTCGCC...CAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCAATTTGGCCGAACTTaGGCCGGTGGTTGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: GWHRLVLPVARGLLASGWQFGRT*AGGCGP
Trigger: AGGACCGCAACCACCGGCCCAAGTTCGGCCAAATTG...CCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp CTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCAATTTGGCCGAACTTaGGCCGGTGGTTGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: LAPLGSSRGPWPPGEWLAQFGRT*AGGCGP
Trigger: AGGACCGCAACCACCGGCCCAAGTTCGGCCAAATTG...GGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp TGGCGAGTGGCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGTGACGTCTCGTGGCTaGCACCGCTTGGTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: WRVAGPAVDRAPGGPARGVTSRG*HRLVLP
Trigger: GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCAC...CCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGCCACTCGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGTGACGTCTCGTGGCTaGCACCGCTTGGTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGVTSRG*HRLVLP
Trigger: GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCAC...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GGCCGCTCCGGGGGCAATTCCTTCTCGGGGAGAGGAGTAGCTGGGAGGCATCCTGTTTGCAGGGGGCCATaGCCACTGAGGACCTCGGCC +
Preference number: 4 (lower is better)
Translates to: GRSGGNSFSGRGVAGRHPVCRGP*PLRTSA
Trigger: GGCCGAGGTCCTCAGTGGCCATGGCCCCCTGCAAAC...AGGATGCCTCCCAGCTACTCCTCTCCCCGAGAAGGAATTGCCCCCGGAGCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGCCCTGAGTCCCTTAAGTGTCTCCTACTGCCCCGCCACCCGGGTCCCTGCTCTCAGCAAGCAAGAGGTTaGGGCGGGGCGACTGCCCCG +
Preference number: 4 (lower is better)
Translates to: SPESLKCLLLPRHPGPCSQQARG*GGATAP
Trigger: CGGGGCAGTCGCCCCGCCCCAACCTCTTGCTTGCTG...AGAGCAGGGACCCGGGTGGCGGGGCAGTAGGAGACACTTAAGGGACTCAGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAAAACAACAGGGGCCCTaGAGTGAGCCAGGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRKQQGP*SEPGVA
Trigger: GGCCACTCCTGGCTCACTCCAGGGCCCCTGTTGTTT...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CCA 90 bp GCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCTGCTTCCCCCGTTCCACTaGCCCATCCAGACACAACTC +
Preference number: 4 (lower is better)
Translates to: APLGSSRGPWPPGEWLALLPPFH*PIQTQL
Trigger: GAGTTGTGTCTGGATGGGCCAGTGGAACGGGGGAAG...CAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR TCA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCAAGTGGTCCGGCTGTTaGTGGGACAGTGGGTACAGG +
Preference number: 4 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGKWSGC*WDSGYR
Trigger: CCTGTACCCACTGTCCCATCAACAGCCGGACCACTT...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp GCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGCAGAGGGGCTGCCTGGTTGGTGGTaGTGTTCACAGAGGCGAACT +
Preference number: 4 (lower is better)
Translates to: AGPAVDRAPGGPARGAEGLPGWW*CSQRRT
Trigger: AGTTCGCCTCTGTGAACATCACCACCAACCAGGCAG...CCCCTCTGCCCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp GTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTAGGGAAATATGCGGGTaGAGGGGTCCTGTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: VAGTAWFFPWPVASWRVAREICG*RGPVPG
Trigger: ACCAGGCACAGGACCCCTTCACCCGCATATTTCCCT...AGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR TCA 90 bp TGGCGAGTGGCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGCTTGGAGGAAGAGGTaGGCCGAGGCAGGTGAATGT +
Preference number: 4 (lower is better)
Translates to: WRVAGPAVDRAPGGPARGAWRKR*AEAGEC
Trigger: ACATTCACCTGCCTCGGCTCACCTCTTCCTCCAAGC...CCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGCCACTCGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp GCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGCAGAGGGGTGCATGTTTTCTTGGTaGCGTCTCGTGGCTGGCACC +
Preference number: 4 (lower is better)
Translates to: AGPAVDRAPGGPARGAEGCMFSW*RLVAGT
Trigger: GGTGCCAGCCACGAGACGTCACCAAGAAAACATGCA...CCCCTCTGCCCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp GTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTCGCTTGGTTGTTGAGTaGGGCCTAGAGGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: VAGTAWFFPWPVASWRVARLVVE*GLEEQQ
Trigger: CTGCTGCTCCTCTAGGCCTCACTCAACAACCAAGCG...AGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp GGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCCTTTCAGCCCTGTaGGCCAACAGGAGAAACAGT +
Preference number: 4 (lower is better)
Translates to: GWHRLVLPVARGLLASGWPLSAL*ANRRNS
Trigger: ACTGTTTCTCCTGTTGGCTCACAGGGCTGAAAGGGG...CCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp GCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGCAGAGGGGCCCCTTTCAGCCCTGTaGGCCAACAGGAGAAACAGT +
Preference number: 4 (lower is better)
Translates to: AGPAVDRAPGGPARGAEGPLSAL*ANRRNS
Trigger: ACTGTTTCTCCTGTTGGCTCACAGGGCTGAAAGGGG...CCCCTCTGCCCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp GGCCGCTCCGGGGGCAATTCCTTCTCGGGGAGAGGAGTAGCTGGGAGGCATCCTTCCCCGCGTTCTCCCTaGCCCAGGAGGACAAAAGCC +
Preference number: 4 (lower is better)
Translates to: GRSGGNSFSGRGVAGRHPSPRSP*PRRTKA
Trigger: GGCTTTTGTCCTCCTGGGTCAGGGAGAACGCGGGGA...AGGATGCCTCCCAGCTACTCCTCTCCCCGAGAAGGAATTGCCCCCGGAGCGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCAGGGCATCGAAGGCTaGGTTCTGAGCCACTTCCAA +
Preference number: 4 (lower is better)
Translates to: LAPLGSSRGPWPPGEWLAQGIEG*VLSHFQ
Trigger: TTGGAAGTGGCTCAGAACTCAGCCTTCGATGCCCTG...GGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR GCA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCCGCTGGGGATGCTGCTaGAGTCACGCACCGAAAACT +
Preference number: 4 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGRWGCC*SHAPKT
Trigger: AGTTTTCGGTGCGTGACTGCAGCAGCATCCCCAGCG...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp TGGCGAGTGGCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGCGCTGGGGATGCTGCTaGAGTCACGCACCGAAAACT +
Preference number: 4 (lower is better)
Translates to: WRVAGPAVDRAPGGPARGRWGCC*SHAPKT
Trigger: AGTTTTCGGTGCGTGACTGCAGCAGCATCCCCAGCG...CCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGCCACTCGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp TTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCCAGGTAGAAGCCGCTaGGGGACACAGGTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: LVTSRGWHRLVLPVARGLPGRSR*GTQVRS
Trigger: GCTTCGGACCTGTGTCCCGCAGCGGCTTCTACCTGG...GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp CTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTCCTGGCCATTGGCGATGCAGCTaGCCCGGGCAGCCACCAGCG +
Preference number: 4 (lower is better)
Translates to: LSAPSGGQGITVNDPGPGHWRCS*PGQPPA
Trigger: CGCTGGTGGCTGCCCGGGGCAGCTGCATCGCCAATG...GCCAGGACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTAACGGCCTCGAAGCCTaGTTTGCACATGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: GDVSWLAPLGSSRGPWPPNGLEA*FAHAAP
Trigger: GGGCGCTGCATGTGCAAAGCAGGCTTCGAGGCCGTT...AGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGACAGGGGGTCCAGGTCTaGTCTGTAGTAGCCATTGCG +
Preference number: 4 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRQGVQV*SVVAIA
Trigger: CGCAATGGCTACTACAGAGCAGACCTGGACCCCCTG...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp TGGCGAGTGGCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGCAGGGGGTCCAGGTCTaGTCTGTAGTAGCCATTGCG +
Preference number: 4 (lower is better)
Translates to: WRVAGPAVDRAPGGPARGQGVQV*SVVAIA
Trigger: CGCAATGGCTACTACAGAGCAGACCTGGACCCCCTG...CCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGCCACTCGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp CTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCGGAGGGGATGGTTGTaGAGGGCATGTCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: LGDVSWLAPLGSSRGPWPRRGWL*RACPGG
Trigger: ACCCCCTGGACATGCCCTGCACAACCATCCCCTCCG...AGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp GCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGCAGAGGGGCACTGCCGATGGAGCTaGCTGGTTGGTGGTGATGTT +
Preference number: 4 (lower is better)
Translates to: AGPAVDRAPGGPARGAEGHCRWS*LVGGDV
Trigger: AACATCACCACCAACCAGGCAGCTCCATCGGCAGTG...CCCCTCTGCCCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp CTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCACTGCCGATGGAGCTaGCTGGTTGGTGGTGATGTT +
Preference number: 4 (lower is better)
Translates to: LAPLGSSRGPWPPGEWLAHCRWS*LVGGDV
Trigger: AACATCACCACCAACCAGGCAGCTCCATCGGCAGTG...GGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp GCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGCAGAGGGGAGCTGGCATTACAGGTaGATGCCACCTTGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: AGPAVDRAPGGPARGAEGSWHYR*MPPCVA
Trigger: AGCCACGCAAGGTGGCATGCACCTGTAATGCCAGCT...CCCCTCTGCCCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR GCA 90 bp CTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCTGGGAAACCTGCCAATaGTTTCCCTGTGGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: LAPLGSSRGPWPPGEWLAWETCQ*FPCGLP
Trigger: GGGCAAGCCACAGGGAAAGCATTGGCAGGTTTCCCA...GGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CCA 90 bp CTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTCCTGGCTCCACGTGGATGCGGTaGGCGCCACGGCGCCGGATA +
Preference number: 4 (lower is better)
Translates to: LSAPSGGQGITVNDPGPGSTWMR*APRRRI
Trigger: TATCCGGCGCCGTGGCGCCCACCGCATCCACGTGGA...GCCAGGACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCTGTGGGGAAGGTCTTGGTaGCCGAGTCAAAGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: APLGSSRGPWPPGEWLALWGRSW*PSQSQP
Trigger: AGGCTGACTTTGACTCGGCCACCAAGACCTTCCCCA...CAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGCAGAGGGGGATTCTCCATCCAGTTaGGGAAGGTCTTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: AGPAVDRAPGGPARGAEGDSPSS*GRSWWP
Trigger: CGGCCACCAAGACCTTCCCCAACTGGATGGAGAATC...CCCCTCTGCCCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGCAGAGGGGCAGGCCTCATCCCCTTaGTTGGCCTTGAAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: AGPAVDRAPGGPARGAEGQASSP*LALKVP
Trigger: TGGGACTTTCAAGGCCAACCAAGGGGATGAGGCCTG...CCCCTCTGCCCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTTCGGTCAGGCCTAGCTaGCGTGGTGCGTACTGTACA +
Preference number: 4 (lower is better)
Translates to: VAGTAWFFPWPVASWRVASVRPS*RGAYCT
Trigger: TGTACAGTACGCACCACGCCAGCTAGGCCTGACCGA...AGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGATCGGTCAGGCCTAGCTaGCGTGGTGCGTACTGTACA +
Preference number: 4 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRSVRPS*RGAYCT
Trigger: TGTACAGTACGCACCACGCCAGCTAGGCCTGACCGA...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGATCTCGAAGGTGTACTaGGTGTGGGCCAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: GWHRLVLPVARGLLASGWISKVY*VWASRS
Trigger: TGACCTGCTGGCCCACACCCAGTACACCTTCGAGAT...CCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGATGGACACTGCCGATaGAGCTGCCTGGTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGDGHCR*SCLVGG
Trigger: ACCACCAACCAGGCAGCTCCATCGGCAGTGTCCATC...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp CTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCAGTCCAGCATGAGTTaGTGCAGGGCGCTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: LGDVSWLAPLGSSRGPWPQSSMS*CRALGQ
Trigger: CTGCCCGAGCGCCCTGCACCAACTCATGCTGGACTG...AGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGGCCATCTTGCCCCTTaGTCCCTGCTTCCCTATTGG +
Preference number: 4 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGGHLAP*SLLPYW
Trigger: CCAATAGGGAAGCAGGGACCAAGGGGCAAGATGGCC...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp GTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTCTTGGTGACGTCTCGTaGCTGGCACCGCTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: VAGTAWFFPWPVASWRVALGDVS*LAPLGS
Trigger: AGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG...AGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCCAGCGCCTGTACCCCTaGGACAGTCACAGTGACATC +
Preference number: 4 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGQRLYP*DSHSDI
Trigger: GATGTCACTGTGACTGTCCCAGGGGTACAGGCGCTG...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CCA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAACTGGCTGTGTGACCTaGGAGAGCCACCATGTCACG +
Preference number: 4 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRTGCVT*ESHHVT
Trigger: CGTGACATGGTGGCTCTCCCAGGTCACACAGCCAGT...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR TCA 90 bp CTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTGGGCCAGCAGGTCACTaGTGTAAATGCGTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: LGDVSWLAPLGSSRGPWPGPAGH*CKCVAR
Trigger: CCGAGCCACGCATTTACATCAGTGACCTGCTGGCCC...AGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp CTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTACGGTGCGGCTCACCTaGTGCATGATGGACACTGCC +
Preference number: 4 (lower is better)
Translates to: LGDVSWLAPLGSSRGPWPTVRLT*CMMDTA
Trigger: GGCAGTGTCCATCATGCATCAGGTGAGCCGCACCGT...AGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp GGCCGCTCCGGGGGCAATTCCTTCTCGGGGAGAGGAGTAGCTGGGAGGCATCCTACGGTGCGGCTCACCTaGTGCATGATGGACACTGCC +
Preference number: 4 (lower is better)
Translates to: GRSGGNSFSGRGVAGRHPTVRLT*CMMDTA
Trigger: GGCAGTGTCCATCATGCATCAGGTGAGCCGCACCGT...AGGATGCCTCCCAGCTACTCCTCTCCCCGAGAAGGAATTGCCCCCGGAGCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CTATTCCTCACCCTCCAGATCACCCCACTTGGCTGGTGGGGCCGGTGGAGAGGGGGGGCGCCATGGCTTTaGGGCTGTTGGGATTGCGGA +
Preference number: 4 (lower is better)
Translates to: LFLTLQITPLGWWGRWRGGAPWL*GCWDCG
Trigger: TCCGCAATCCCAACAGCCTCAAAGCCATGGCGCCCC...CCCTCTCCACCGGCCCCACCAGCCAAGTGGGGTGATCTGGAGGGTGAGGAATAG
64% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR TCA 90 bp TTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCGACGTCAAAGGAGGTaGAGCCGGCATTGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: LVTSRGWHRLVLPVARGLRRQRR*SRHWRS
Trigger: GCTTCGCCAATGCCGGCTTCACCTCCTTTGACGTCG...GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp TTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCAGCGGCAGTCGGAGCTaGCGGCAGTCACTGCAGTAT +
Preference number: 4 (lower is better)
Translates to: LVTSRGWHRLVLPVARGLSGSRS*RQSLQY
Trigger: ATACTGCAGTGACTGCCGTCAGCTCCGACTGCCGCT...GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR TCA 90 bp GGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGTCAGCTGATGCCATCTaGGTAAGAGGCACTGCTGGT +
Preference number: 4 (lower is better)
Translates to: GWHRLVLPVARGLLASGWSADAI*VRGTAG
Trigger: ACCAGCAGTGCCTCTTACTCAGATGGCATCAGCTGA...CCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR GCA 90 bp GCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGCAGAGGGGGCGTTTCTGCATAAGTaGACACAGGCAGGGCTAGGA +
Preference number: 4 (lower is better)
Translates to: AGPAVDRAPGGPARGAEGAFLHK*TQAGLG
Trigger: TCCTAGCCCTGCCTGTGTGCACTTATGCAGAAACGC...CCCCTCTGCCCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR GCA 90 bp CTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTAACGGCCTCGAAGCCTaGTTTGCACATGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: LGDVSWLAPLGSSRGPWPNGLEA*FAHAAP
Trigger: GGGCGCTGCATGTGCAAAGCAGGCTTCGAGGCCGTT...AGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGACACTGCCGATGGAGCTaGCTGGTTGGTGGTGATGTT +
Preference number: 4 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRHCRWS*LVGGDV
Trigger: AACATCACCACCAACCAGGCAGCTCCATCGGCAGTG...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp GGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGATGCATGATGGACACTaGCGATGGAGCTGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: GWHRLVLPVARGLLASGWMHDGH*RWSCLV
Trigger: AACCAGGCAGCTCCATCGGCAGTGTCCATCATGCAT...CCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp TTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCACCTGCCACGGTGCGTaGCCGCACCTGGAAGACATA +
Preference number: 4 (lower is better)
Translates to: LVTSRGWHRLVLPVARGLTCHGA*PHLEDI
Trigger: TATGTCTTCCAGGTGCGGGCACGCACCGTGGCAGGT...GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp GCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGCAGAGGGGCGATGTAGATCTTCATaGCTGGGGTCATGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: AGPAVDRAPGGPARGAEGRCRSS*LGSCGH
Trigger: GTGGCCACATGACCCCAGGCATGAAGATCTACATCG...CCCCTCTGCCCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp GCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCTGCAAAGATCTCTCTCTTaGCTGGCAGCTTCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: APLGSSRGPWPPGEWLALQRSLS*LAASGG
Trigger: GCCACCTGAAGCTGCCAGGCAAGAGAGAGATCTTTG...CAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp CTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTCCTGGCTCCCTGCCTGGCCTATaGTGGGCCAGCCTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LSAPSGGQGITVNDPGPGSLPGL*WASLRG
Trigger: GCCTCTGAGGCTGGCCCAGCATAGGCCAGGCAGGGA...GCCAGGACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCTGTCTCGTCGGCTGCAATaGTATCCACCTTCACCCATG +
Preference number: 4 (lower is better)
Translates to: APLGSSRGPWPPGEWLALSRRLQ*YPPSPM
Trigger: CATGGGTGAAGGTGGATACCATTGCAGCCGACGAGA...CAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCTGCTTGAAAGTCCCAGATaGACAACCTCGGCAGACGGT +
Preference number: 4 (lower is better)
Translates to: APLGSSRGPWPPGEWLALLESPR*TTSADG
Trigger: ACCGTCTGCCGAGGTTGTCCATCTGGGACTTTCAAG...CAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGCAGAGGGGCTTGAAAGTCCCAGATaGACAACCTCGGCAGACGGT +
Preference number: 4 (lower is better)
Translates to: AGPAVDRAPGGPARGAEGLESPR*TTSADG
Trigger: ACCGTCTGCCGAGGTTGTCCATCTGGGACTTTCAAG...CCCCTCTGCCCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGACTGTTGATGGGACAGTaGGTACAGGCCTCATCCCCT +
Preference number: 4 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRLLMGQ*VQASSP
Trigger: AGGGGATGAGGCCTGTACCCACTGTCCCATCAACAG...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTCTGTTGATGGGACAGTaGGTACAGGCCTCATCCCCT +
Preference number: 4 (lower is better)
Translates to: VAGTAWFFPWPVASWRVALLMGQ*VQASSP
Trigger: AGGGGATGAGGCCTGTACCCACTGTCCCATCAACAG...AGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp CTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCTGGAAATCACAGCCTaGGGCGCGGAGGGGATGGTT +
Preference number: 4 (lower is better)
Translates to: LGDVSWLAPLGSSRGPWPLEITA*GAEGMV
Trigger: AACCATCCCCTCCGCGCCCCAGGCTGTGATTTCCAG...AGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAACGCCGTTCACAGCCTaGATCTCGAAGGTGTACTGG +
Preference number: 4 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRTPFTA*ISKVYW
Trigger: CCAGTACACCTTCGAGATCCAGGCTGTGAACGGCGT...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGGGGTCATGTGGCCACTaGTGTAGTGTTGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: GWHRLVLPVARGLLASGWGSCGH*CSVAAC
Trigger: ACAAGCTGCAACACTACACCAGTGGCCACATGACCC...CCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCTGGGGTCATGTGGCCACTaGTGTAGTGTTGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: APLGSSRGPWPPGEWLALGSCGH*CSVAAC
Trigger: ACAAGCTGCAACACTACACCAGTGGCCACATGACCC...CAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTTCACAGGTGTGCTCTTaGTCACGACACCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: VAGTAWFFPWPVASWRVASQVCS*SRHPPG
Trigger: ACCTGGAGGGTGTCGTGACCAAGAGCACACCTGTGA...AGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTCAATTTGGCCGAACTTaGGCCGGTGGTTGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: GDVSWLAPLGSSRGPWPPQFGRT*AGGCGP
Trigger: AGGACCGCAACCACCGGCCCAAGTTCGGCCAAATTG...AGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCTGGGTGACAAGCAGAAGTaGCTGGGCACTTACTCCATC +
Preference number: 4 (lower is better)
Translates to: APLGSSRGPWPPGEWLALGDKQK*LGTYSI
Trigger: GATGGAGTAAGTGCCCAGCCACTTCTGCTTGTCACC...CAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp CTATTCCTCACCCTCCAGATCACCCCACTTGGCTGGTGGGGCCGGTGGAGAGGGTGGCCTCCTGGCGAGTaGCTGGCCCTGCAGTGGATA +
Preference number: 4 (lower is better)
Translates to: LFLTLQITPLGWWGRWRGWPPGE*LALQWI
Trigger: TATCCACTGCAGGGCCAGCCACTCGCCAGGAGGCCA...CCCTCTCCACCGGCCCCACCAGCCAAGTGGGGTGATCTGGAGGGTGAGGAATAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp CAGCTGGTGAGATTTCCTTGGTCACAGCAGTGGGGTCCGGAGGAGCCAGGTCTGTCTTCCCGTGGCCCGTaGCCTCCTGGCGAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: QLVRFPWSQQWGPEEPGLSSRGP*PPGEWL
Trigger: CAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGA...CAGACCTGGCTCCTCCGGACCCCACTGCTGTGACCAAGGAAATCTCACCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TGGCCCTGCAGCTTCCTTGCTGCAGGGAGGGAAATTCCACCCCAGATGAGTCCCTCTTCCCGTGGCCCGTaGCCTCCTGGCGAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: WPCSFLAAGREIPPQMSPSSRGP*PPGEWL
Trigger: CAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGA...GGGACTCATCTGGGGTGGAATTTCCCTCCCTGCAGCAAGGAAGCTGCAGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTGTGACGTCTCGTGGCTaGCACCGCTTGGTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LGDVSWLAPLGSSRGPWPVTSRG*HRLVLP
Trigger: GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCAC...AGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp CTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCAGTGTTTCTTGGCTCTaGCCAGGTCACCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LAPLGSSRGPWPPGEWLASVSWL*PGHLPR
Trigger: TCTGGGAAGGTGACCTGGCCAGAGCCAAGAAACACT...GGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp TGGCGAGTGGCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGCCATCTCCTCGGATCTaGGAAAGGTCCCGAGAGGTA +
Preference number: 4 (lower is better)
Translates to: WRVAGPAVDRAPGGPARGPSPRI*ERSREV
Trigger: TACCTCTCGGGACCTTTCCCAGATCCGAGGAGATGG...CCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGCCACTCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CCA 90 bp GTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTCTGCATAGCTCAGGCTaGGGCAGACACTTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: VAGTAWFFPWPVASWRVALHSSG*GRHFRR
Trigger: TCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAG...AGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CCA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACTGGCCTCCTGGCGAGTaGCTGGCCCTCCACAGACTG +
Preference number: 4 (lower is better)
Translates to: RGMLARVSERTLWRAGYHWPPGE*LALHRL
Trigger: CAGTCTGTGGAGGGCCAGCCACTCGCCAGGAGGCCA...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400191.7
CDS-3UTR CCA 90 bp GGAAACAGGGTTCTGGGAAACCCTGCCAGACAGCCCCATACCCTGGTTGAGAGCTGGCCCGTGGCCTCCTaGCGAGTGGCTGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GNRVLGNPARQPHTLVESWPVAS*RVAGPP
Trigger: TGGAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCA...GCTCTCAACCAGGGTATGGGGCTGTCTGGCAGGGTTTCCCAGAACCCTGTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400191.7
CDS-3UTR TCA 90 bp GGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCAGTTGTTCTGGCTTaGCTCAAACACGTTGCACAC +
Preference number: 4 (lower is better)
Translates to: GWHRLVLPVARGLLASGWPVVLA*LKHVAH
Trigger: GTGTGCAACGTGTTTGAGTCAAGCCAGAACAACTGG...CCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACTGGCGCCATTCTGGATaGTGCGGGGGCACTTGCGGT +
Preference number: 4 (lower is better)
Translates to: RGMLARVSERTLWRAGYHWRHSG*CGGTCG
Trigger: ACCGCAAGTGCCCCCGCATCATCCAGAATGGCGCCA...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCAAGTGGTCCGGCTGTTaGTGGGACAGTGGGTACAGG +
Preference number: 4 (lower is better)
Translates to: LVTSRGWHRLVLPVARGLKWSGC*WDSGYR
Trigger: CCTGTACCCACTGTCCCATCAACAGCCGGACCACTT...GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp CTATTCCTCACCCTCCAGATCACCCCACTTGGCTGGTGGGGCCGGTGGAGAGGGCGACGTCAAAGGAGGTaGAGCCGGCATTGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: LFLTLQITPLGWWGRWRGRRQRR*SRHWRS
Trigger: GCTTCGCCAATGCCGGCTTCACCTCCTTTGACGTCG...CCCTCTCCACCGGCCCCACCAGCCAAGTGGGGTGATCTGGAGGGTGAGGAATAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR TCA 90 bp CTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTCCTGGCTCCCCGCGTTCTCCCTaGCCCAGGAGGACAAAAGCC +
Preference number: 4 (lower is better)
Translates to: LSAPSGGQGITVNDPGPGSPRSP*PRRTKA
Trigger: GGCTTTTGTCCTCCTGGGTCAGGGAGAACGCGGGGA...GCCAGGACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CACAGGCACCTCTGCCGTGTGGCCTCCCAGCTCTGGAAGGCAGTGACTAAGATTGCTTGCCCGTGTCTCTaGGCGCACCCTCTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: HRHLCRVASQLWKAVTKIACPCL*AHPLEG
Trigger: GCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGC...AATCTTAGTCACTGCCTTCCAGAGCTGGGAGGCCACACGGCAGAGGTGCCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TGCCCCCTGCCCATCAGAGTCCCTCTCCACAGAGGGGAAAGCGGCCAGGCTGATCTTTGGGGCACAAAGTaGAGGCCAGTGGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: CPLPIRVPLHRGESGQADLWGTK*RPVGHC
Trigger: GCAGTGGCCCACTGGCCTTCACTTTGTGCCCCAAAG...ATCAGCCTGGCCGCTTTCCCCTCTGTGGAGAGGGACTCTGATGGGCAGGGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TGCCCCCTGCCCATCAGAGTCCCTCTCCACAGAGGGGAAAGCGGCCAGGCTGATAGCTGTGTGCCTGGGTaGGCGGGTGGTGTAAGTGGA +
Preference number: 4 (lower is better)
Translates to: CPLPIRVPLHRGESGQADSCVPG*AGGVSG
Trigger: TCCACTTACACCACCCGCTCACCCAGGCACACAGCT...ATCAGCCTGGCCGCTTTCCCCTCTGTGGAGAGGGACTCTGATGGGCAGGGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CTCCCGGAACAGGTGAGTGACAGACGATGGGCTGTGCTGTGCTGGATGTTCACTACAGGGGCCCTGGAGTaGGCCAGGAGTGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LPEQVSDRRWAVLCWMFTTGALE*ARSGPG
Trigger: CCCTGGGCCACTCCTGGCTCACTCCAGGGCCCCTGT...AGTGAACATCCAGCACAGCACAGCCCATCGTCTGTCACTCACCTGTTCCGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GGCCGCTCCGGGGGCAATTCCTTCTCGGGGAGAGGAGTAGCTGGGAGGCATCCTGCATCCTGCCCCATCTaGTGGCTGAACTGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GRSGGNSFSGRGVAGRHPASCPI*WLNWCF
Trigger: GAAGCACCAGTTCAGCCATCAGATGGGGCAGGATGC...AGGATGCCTCCCAGCTACTCCTCTCCCCGAGAAGGAATTGCCCCCGGAGCGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AGCCCTGAGTCCCTTAAGTGTCTCCTACTGCCCCGCCACCCGGGTCCCTGCTCTTCTCCAGGACTAGGGTaGCCAGGGCAGGGATGGGTT +
Preference number: 4 (lower is better)
Translates to: SPESLKCLLLPRHPGPCSSPGLG*PGQGWV
Trigger: AACCCATCCCTGCCCTGGTCACCCTAGTCCTGGAGA...AGAGCAGGGACCCGGGTGGCGGGGCAGTAGGAGACACTTAAGGGACTCAGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTTGGCCAGGTGTTGAGTaGACAGGTCTGGACCATAGC +
Preference number: 4 (lower is better)
Translates to: GDVSWLAPLGSSRGPWPPWPGVE*TGLDHS
Trigger: GCTATGGTCCAGACCTGTTCACTCAACACCTGGCCA...AGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR TCA 90 bp TTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCACCCCCAGGAAGGCCTaGTGCATGCAATTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: LVTSRGWHRLVLPVARGLTPRKA*CMQFCH
Trigger: GTGGCAGAATTGCATGCATCAGGCCTTCCTGGGGGT...GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR GCA 90 bp TTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCACCCTGATGGAGGATaGACCATCCAGCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LVTSRGWHRLVLPVARGLHPDGG*TIQPSS
Trigger: TGAGCTGGGCTGGATGGTGCATCCTCCATCAGGGTG...GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp GGCCGCTCCGGGGGCAATTCCTTCTCGGGGAGAGGAGTAGCTGGGAGGCATCCTCACCCTGATGGAGGATaGACCATCCAGCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GRSGGNSFSGRGVAGRHPHPDGG*TIQPSS
Trigger: TGAGCTGGGCTGGATGGTGCATCCTCCATCAGGGTG...AGGATGCCTCCCAGCTACTCCTCTCCCCGAGAAGGAATTGCCCCCGGAGCGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGTTGACTCAAACACGTTaGACACCTGGTACGTGCGGA +
Preference number: 4 (lower is better)
Translates to: GWHRLVLPVARGLLASGWLTQTR*TPGTCG
Trigger: TCCGCACGTACCAGGTGTGCAACGTGTTTGAGTCAA...CCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCCTCTGTAGTAGCCATTaGGGCAGACACAGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGLCSSH*GRHSWW
Trigger: CCACCAACTGTGTCTGCCGCAATGGCTACTACAGAG...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp TGGCGAGTGGCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGATGCATGATGGACACTaGCGATGGAGCTGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: WRVAGPAVDRAPGGPARGMHDGH*RWSCLV
Trigger: AACCAGGCAGCTCCATCGGCAGTGTCCATCATGCAT...CCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGCCACTCGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp CTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTCCTGGCCCGGCTTTGAGGCCCTaGACGGTGACCGTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: LSAPSGGQGITVNDPGPGPALRP*TVTVLV
Trigger: CACCAACACGGTCACCGTGCAGGGCCTCAAAGCCGG...GCCAGGACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTTCTGGAAGTACATCTTaGCGCTGTAGCGCCCGTAAC +
Preference number: 4 (lower is better)
Translates to: VAGTAWFFPWPVASWRVASGSTS*RCSARN
Trigger: GTTACGGGCGCTACAGCGGCAAGATGTACTTCCAGA...AGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp GCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCTGGCAACTTCTCCTGGATaGTTGTCTGGTACTCGGCTT +
Preference number: 4 (lower is better)
Translates to: APLGSSRGPWPPGEWLALATSPG*LSGTRL
Trigger: AAGCCGAGTACCAGACAAGCATCCAGGAGAAGTTGC...CAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp TTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCTCCCTTCCTTCCCTTTaGAGCTCAGGCTCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: LVTSRGWHRLVLPVARGLSLPSL*SSGSRN
Trigger: GTTCCGGGAGCCTGAGCTGCAAAGGGAAGGAAGGGA...GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR GCA 90 bp GCAGCTGGTCCCCATTTCCACGGTGCCCTGGCCTGTGTTTACAAGGCAGCTTTCCGCCACCCGGGTCCCTaGTCTGAGGCCTCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: AAGPHFHGALACVYKAAFRHPGP*SEASGP
Trigger: TGGACCAGAGGCCTCAGAGCAGGGACCCGGGTGGCG...GAAAGCTGCCTTGTAAACACAGGCCAGGGCACCGTGGAAATGGGGACCAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCGCAAATTCCTGGCCCTaGAGCTTCCTTGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LVTSRGWHRLVLPVARGLANSWP*SFLAAG
Trigger: CCCTGCAGCAAGGAAGCTGCAGGGCCAGGAATTTGC...GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CCA 90 bp TGGCGAGTGGCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGAGTTGGGGAAGGTCTTaGTGGCCGAGTCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: WRVAGPAVDRAPGGPARGSWGRS*WPSQSQ
Trigger: CTGACTTTGACTCGGCCACCAAGACCTTCCCCAACT...CCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGCCACTCGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp TTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCCCGACAGGGTTTCCTaGAAGATGGCGCCATTCTGG +
Preference number: 4 (lower is better)
Translates to: LVTSRGWHRLVLPVARGLPDRVS*KMAPFW
Trigger: CCAGAATGGCGCCATCTTCCAGGAAACCCTGTCGGG...GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp CTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCCGACAGGGTTTCCTaGAAGATGGCGCCATTCTGG +
Preference number: 4 (lower is better)
Translates to: LGDVSWLAPLGSSRGPWPPDRVS*KMAPFW
Trigger: CCAGAATGGCGCCATCTTCCAGGAAACCCTGTCGGG...AGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp TTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCGATGGACACTGCCGATaGAGCTGCCTGGTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LVTSRGWHRLVLPVARGLDGHCR*SCLVGG
Trigger: ACCACCAACCAGGCAGCTCCATCGGCAGTGTCCATC...GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp CTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCTGGTGGGGCTTTTTATaGCTGTGGCGTTGTACTCAC +
Preference number: 4 (lower is better)
Translates to: LAPLGSSRGPWPPGEWLAWWGFL*LWRCTH
Trigger: GTGAGTACAACGCCACAGCCATAAAAAGCCCCACCA...GGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGCAGAGGGGGCTTCTGTCATGGTCTaGAAGTACATCTTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: AGPAVDRAPGGPARGAEGASVMV*KYILPL
Trigger: CAGCGGCAAGATGTACTTCCAGACCATGACAGAAGC...CCCCTCTGCCCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGCAGAGGGGAGTGGCAACTTCTCCTaGATGCTTGTCTGGTACTCG +
Preference number: 4 (lower is better)
Translates to: AGPAVDRAPGGPARGAEGSGNFS*MLVWYS
Trigger: CGAGTACCAGACAAGCATCCAGGAGAAGTTGCCACT...CCCCTCTGCCCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGAGCCGATGATGAGTaGCAACTTCTCCTGGATGCT +
Preference number: 4 (lower is better)
Translates to: VAGTAWFFPWPVASWRVAGADDE*QLLLDA
Trigger: AGCATCCAGGAGAAGTTGCCACTCATCATCGGCTCC...AGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACTTCCGCCCAGGGCACTaGTGTAGGTGGGGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: RGMLARVSERTLWRAGYHFRPGH*CRWGLR
Trigger: CCTCAGACCCCACCTACACCAGTGCCCTGGGCGGAA...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TCTGCTACTTATGTACCTGCAGGGGCTCACCCTGATTCCCAGGGCATCGAAGGCTGGCCCGTGGCCTCCTaGCGAGTGGCTGGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: SATYVPAGAHPDSQGIEGWPVAS*RVAGPA
Trigger: TGCAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCA...GCCTTCGATGCCCTGGGAATCAGGGTGAGCCCCTGCAGGTACATAAGTAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CCA 90 bp CTCCCGGAACAGGTGAGTGACAGACGATGGGCTGTGCTGTGCTGGATGTTCACTGCCTCCGCAGAGCCATaGCTGCGCTTCCCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: LPEQVSDRRWAVLCWMFTASAEP*LRFPGP
Trigger: AGGCCCCGGGAAGCGCAGCCATGGCTCTGCGGAGGC...AGTGAACATCCAGCACAGCACAGCCCATCGTCTGTCACTCACCTGTTCCGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CCA 90 bp TGCCCCCTGCCCATCAGAGTCCCTCTCCACAGAGGGGAAAGCGGCCAGGCTGATGCCTGGGTGAGCGGGTaGTGTAAGTGGAAGGCGCTT +
Preference number: 4 (lower is better)
Translates to: CPLPIRVPLHRGESGQADAWVSG*CKWKAL
Trigger: AAGCGCCTTCCACTTACACCACCCGCTCACCCAGGC...ATCAGCCTGGCCGCTTTCCCCTCTGTGGAGAGGGACTCTGATGGGCAGGGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTTGGGCAGGCGGGGGCTaGCACTTGGGGAGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: VSLSAPSGGQGITVNDPGWAGGG*HLGRLS
Trigger: GCTCAACCTCCCCAAGTGCCAGCCCCCGCCTGCCCA...ACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCGACAGATGGCCTGGTTaGAATCTTCTGGGAATCACC +
Preference number: 4 (lower is better)
Translates to: LAPLGSSRGPWPPGEWLADRWPG*NLLGIT
Trigger: GGTGATTCCCAGAAGATTCCAACCAGGCCATCTGTC...GGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CCA 90 bp GGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCAGGGCAGTTTGTTATaGGGGAAGAGTCAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: GWHRLVLPVARGLLASGWQGSLL*GKSQVR
Trigger: CCTCACTTGACTCTTCCCCCATAACAAACTGCCCTG...CCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CCA 90 bp GGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGGTCCTAATCTGCGTCTaGGTTTGGGCATCCTATCTG +
Preference number: 4 (lower is better)
Translates to: GWHRLVLPVARGLLASGWVLICV*VWASYL
Trigger: CAGATAGGATGCCCAAACCCAGACGCAGATTAGGAC...CCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CCA 90 bp GGCCGCTCCGGGGGCAATTCCTTCTCGGGGAGAGGAGTAGCTGGGAGGCATCCTACTGGCTGTGTGACCTaGGAGAGCCACCATGTCACG +
Preference number: 4 (lower is better)
Translates to: GRSGGNSFSGRGVAGRHPTGCVT*ESHHVT
Trigger: CGTGACATGGTGGCTCTCCCAGGTCACACAGCCAGT...AGGATGCCTCCCAGCTACTCCTCTCCCCGAGAAGGAATTGCCCCCGGAGCGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGACCCACGGCGGTTaGAACCCCAGCTGTATCAGT +
Preference number: 4 (lower is better)
Translates to: LVTSRGWHRLVLPVARGLLTHGG*NPSCIS
Trigger: ACTGATACAGCTGGGGTTCCAACCGCCGTGGGTCAG...GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR TCA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGACCAGTTGTTCTGGCTTaGCTCAAACACGTTGCACAC +
Preference number: 4 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRPVVLA*LKHVAH
Trigger: GTGTGCAACGTGTTTGAGTCAAGCCAGAACAACTGG...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp GCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGCAGAGGGGCGTTACAGTAGAGCTTaGTGGGTACATCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: AGPAVDRAPGGPARGAEGRYSRA*WVHPPL
Trigger: AAGAGGTGGATGTACCCATCAAGCTCTACTGTAACG...CCCCTCTGCCCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp TTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCCCCTTGGTTGGCCTTaGAAGTCCCAGATGGACAAC +
Preference number: 4 (lower is better)
Translates to: LVTSRGWHRLVLPVARGLPLGWP*KSQMDN
Trigger: GTTGTCCATCTGGGACTTTCAAGGCCAACCAAGGGG...GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp GTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTCACAGCTCTTGCAGATaGTGTTGTAGACGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: VAGTAWFFPWPVASWRVAHSSCR*CCRRGP
Trigger: AGGACCTCGTCTACAACATCATCTGCAAGAGCTGTG...AGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp TGGCCCTGCAGCTTCCTTGCTGCAGGGAGGGAAATTCCACCCCAGATGAGTCCCGGGGCGCCATGGCTTTaGGGCTGTTGGGATTGCGGA +
Preference number: 4 (lower is better)
Translates to: WPCSFLAAGREIPPQMSPGAPWL*GCWDCG
Trigger: TCCGCAATCCCAACAGCCTCAAAGCCATGGCGCCCC...GGGACTCATCTGGGGTGGAATTTCCCTCCCTGCAGCAAGGAAGCTGCAGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGGAGGTGCTATGATTTaGCCAAGGTCACAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGGGAMI*PRSQSL
Trigger: CAAGCTCTGTGACCTTGGTCAAATCATAGCACCTCC...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR TCA 90 bp CTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTTGCATGTTTTCTTGGTaGCGTCTCGTGGCTGGCACC +
Preference number: 4 (lower is better)
Translates to: LGDVSWLAPLGSSRGPWPCMFSW*RLVAGT
Trigger: GGTGCCAGCCACGAGACGTCACCAAGAAAACATGCA...AGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp GCCAGGAAAGGATTAGTAACCAGGCAGCGGGTGGCTCAGAGCTGTGTGCCTGGGCATCCTCAGGAAGGCTaGCCTTTCTGGGGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: ARKGLVTRQRVAQSCVPGHPQEG*PFWGPR
Trigger: GCGGGGACCCCAGAAAGGTCAGCCTTCCTGAGGATG...CCCAGGCACACAGCTCTGAGCCACCCGCTGCCTGGTTACTAATCCTTTCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGCGGCAGTCGGAGCTaGCGGCAGTCACTGCAGTAT +
Preference number: 4 (lower is better)
Translates to: RGMLARVSERTLWRAGYHSGSRS*RQSLQY
Trigger: ATACTGCAGTGACTGCCGTCAGCTCCGACTGCCGCT...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AACCTCCTGAGATTAGCCTCCGAGGGGGTGTGCCCGGAGTTGACTCTCTTTCCTGCTTGCCCGTGTCTCTaGGCGCACCCTCTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: NLLRLASEGVCPELTLFPACPCL*AHPLEG
Trigger: GCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGC...AGGAAAGAGAGTCAACTCCGGGCACACCCCCTCGGAGGCTAATCTCAGGAGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TGGCCCTGCAGCTTCCTTGCTGCAGGGAGGGAAATTCCACCCCAGATGAGTCCCGGCTCCCGGAACAGGTaGGTGACAGACGATGGGCTG +
Preference number: 4 (lower is better)
Translates to: WPCSFLAAGREIPPQMSPGSRNR*VTDDGL
Trigger: CAGCCCATCGTCTGTCACTCACCTGTTCCGGGAGCC...GGGACTCATCTGGGGTGGAATTTCCCTCCCTGCAGCAAGGAAGCTGCAGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTCCTGGCGCTCCCACCAGAAGGTaGCCTTGTGTGCCGAGACAG +
Preference number: 4 (lower is better)
Translates to: LSAPSGGQGITVNDPGPGAPTRR*PCVPRQ
Trigger: CTGTCTCGGCACACAAGGTCACCTTCTGGTGGGAGC...GCCAGGACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TACCAACTGTGTGCAGAGCAGCCGGAAACTCCCCTAACACTGCTGGGCAGGCGGGGACAGGAAGCCATCTaGCGGGAAGCACCGACTGCC +
Preference number: 4 (lower is better)
Translates to: YQLCAEQPETPLTLLGRRGQEAI*REAPTA
Trigger: GGCAGTCGGTGCTTCCCGTCAGATGGCTTCCTGTCC...CCGCCTGCCCAGCAGTGTTAGGGGAGTTTCCGGCTGCTCTGCACACAGTTGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGCTGTGTGCCTGGGTaGGCGGGTGGTGTAAGTGGA +
Preference number: 4 (lower is better)
Translates to: RGMLARVSERTLWRAGYHSCVPG*AGGVSG
Trigger: TCCACTTACACCACCCGCTCACCCAGGCACACAGCT...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AACCTCCTGAGATTAGCCTCCGAGGGGGTGTGCCCGGAGTTGACTCTCTTTCCTCCCGGGTCCCTGCTCTaGGGCCTCTGGTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: NLLRLASEGVCPELTLFPPGSLL*GLWSST
Trigger: AGTGCTGGACCAGAGGCCTCAGAGCAGGGACCCGGG...AGGAAAGAGAGTCAACTCCGGGCACACCCCCTCGGAGGCTAATCTCAGGAGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGGATTATCTGCGTCAGTaGGGATGGAAACTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: GWHRLVLPVARGLLASGWDYLRQ*GWKLKQ
Trigger: CTGCTTCAGTTTCCATCCTCACTGACGCAGATAATC...CCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR TCA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCCGATGGCAAACATTTTaGGAAATCCCAGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGRWQTF*EIPGGG
Trigger: CCCACCTCCTGGGATTTCTCAAAATGTTTGCCATCG...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR TCA 90 bp AACCTCCTGAGATTAGCCTCCGAGGGGGTGTGCCCGGAGTTGACTCTCTTTCCTCGGAGGAGCCAGGTCTaGCCCACGGCGGTTGGAACC +
Preference number: 4 (lower is better)
Translates to: NLLRLASEGVCPELTLFPRRSQV*PTAVGT
Trigger: GGTTCCAACCGCCGTGGGTCAGACCTGGCTCCTCCG...AGGAAAGAGAGTCAACTCCGGGCACACCCCCTCGGAGGCTAATCTCAGGAGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GCCAGGAAAGGATTAGTAACCAGGCAGCGGGTGGCTCAGAGCTGTGTGCCTGGGCGTAACCTGCCACGGTaGGTGCCCGCACCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: ARKGLVTRQRVAQSCVPGRNLPR*VPAPGR
Trigger: TCTTCCAGGTGCGGGCACGCACCGTGGCAGGTTACG...CCCAGGCACACAGCTCTGAGCCACCCGCTGCCTGGTTACTAATCCTTTCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AACCTCCTGAGATTAGCCTCCGAGGGGGTGTGCCCGGAGTTGACTCTCTTTCCTGTAGCGCCCGTAACCTaGCACGGTGCGTGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: NLLRLASEGVCPELTLFPVAPVT*HGACPH
Trigger: GTGCGGGCACGCACCGTGGCAGGTTACGGGCGCTAC...AGGAAAGAGAGTCAACTCCGGGCACACCCCCTCGGAGGCTAATCTCAGGAGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACTGCAGACCTGGGGGTTaGCCATCCTCAGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: RGMLARVSERTLWRAGYHCRPGG*PSSGRL
Trigger: CAGCCTTCCTGAGGATGGGCAACCCCCAGGTCTGCA...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAAGACCCTCTTCCGAGTaGACTCTCGTCAATTCTCTG +
Preference number: 4 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRRPSSE*TLVNSL
Trigger: CAGAGAATTGACGAGAGTGCACTCGGAAGAGGGTCT...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR GCA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACTTAAGTGTCTCCTACTaGCCCGCCACCCGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: RGMLARVSERTLWRAGYHLSVSY*PATRVP
Trigger: AGGGACCCGGGTGGCGGGGCAGTAGGAGACACTTAA...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGCCCTGAGTCCCTTAAGTGTCTCCTACTGCCCCGCCACCCGGGTCCCTGCTCTGCCCTGCAGCTTCCTTaGTGCAGGGAGGGAAATTCC +
Preference number: 4 (lower is better)
Translates to: SPESLKCLLLPRHPGPCSALQLP*CREGNS
Trigger: GGAATTTCCCTCCCTGCAGCAAGGAAGCTGCAGGGC...AGAGCAGGGACCCGGGTGGCGGGGCAGTAGGAGACACTTAAGGGACTCAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTCCTGGCCAACTTGGTGCCCCCTaGCCATCAGAGTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LSAPSGGQGITVNDPGPGQLGAP*PSESLS
Trigger: GGAGAGGGACTCTGATGGGCAGGGGGCACCAAGTTG...GCCAGGACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGCCCTGAGTCCCTTAAGTGTCTCCTACTGCCCCGCCACCCGGGTCCCTGCTCTAGAGGCTCAACTTGGTaGCCCCTGCCCATCAGAGTC +
Preference number: 4 (lower is better)
Translates to: SPESLKCLLLPRHPGPCSRGSTW*PLPIRV
Trigger: GACTCTGATGGGCAGGGGGCACCAAGTTGAGCCTCT...AGAGCAGGGACCCGGGTGGCGGGGCAGTAGGAGACACTTAAGGGACTCAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGGAGCAGGCTGCTACCCTGCGGTCATGACGCACTTTCCCTAGCATCATGTGGTTCCACGTGGATGCGGTaGGCGCCACGGCGCCGGATA +
Preference number: 4 (lower is better)
Translates to: RSRLLPCGHDALSLASCGSTWMR*APRRRI
Trigger: TATCCGGCGCCGTGGCGCCCACCGCATCCACGTGGA...ACCACATGATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGCAGCCTGCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTTCTCGTCGGCTGCAATaGTATCCACCTTCACCCATG +
Preference number: 4 (lower is better)
Translates to: GDVSWLAPLGSSRGPWPPSRRLQ*YPPSPM
Trigger: CATGGGTGAAGGTGGATACCATTGCAGCCGACGAGA...AGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp TTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCAAGATGGCGCCATTCTaGATGATGCGGGGGCACTTG +
Preference number: 4 (lower is better)
Translates to: LVTSRGWHRLVLPVARGLKMAPF*MMRGHL
Trigger: CAAGTGCCCCCGCATCATCCAGAATGGCGCCATCTT...GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp CTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTAAGATGGCGCCATTCTaGATGATGCGGGGGCACTTG +
Preference number: 4 (lower is better)
Translates to: LGDVSWLAPLGSSRGPWPKMAPF*MMRGHL
Trigger: CAAGTGCCCCCGCATCATCCAGAATGGCGCCATCTT...AGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp CTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCAGGCCTCATCCCCTTaGTTGGCCTTGAAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: LGDVSWLAPLGSSRGPWPQASSP*LALKVP
Trigger: TGGGACTTTCAAGGCCAACCAAGGGGATGAGGCCTG...AGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCTGGTGGGGCTTTTTATaGCTGTGGCGTTGTACTCAC +
Preference number: 4 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGWWGFL*LWRCTH
Trigger: GTGAGTACAACGCCACAGCCATAAAAAGCCCCACCA...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTTGGTGGGGCTTTTTATaGCTGTGGCGTTGTACTCAC +
Preference number: 4 (lower is better)
Translates to: VAGTAWFFPWPVASWRVAWWGFL*LWRCTH
Trigger: GTGAGTACAACGCCACAGCCATAAAAAGCCCCACCA...AGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGTAGATCTTCATGCCTaGGGTCATGTGGCCACTGGT +
Preference number: 4 (lower is better)
Translates to: GDVSWLAPLGSSRGPWPPVDLHA*GHVATG
Trigger: ACCAGTGGCCACATGACCCCAGGCATGAAGATCTAC...AGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp TTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCGATCTCTCTCTTGCCTaGCAGCTTCAGGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: LVTSRGWHRLVLPVARGLDLSLA*QLQVAT
Trigger: AGTGGCCACCTGAAGCTGCCAGGCAAGAGAGAGATC...GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp TTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCTCACAGGTGTGCTCTTaGTCACGACACCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LVTSRGWHRLVLPVARGLSQVCS*SRHPPG
Trigger: ACCTGGAGGGTGTCGTGACCAAGAGCACACCTGTGA...GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGACAGTCCAGCATGAGTTaGTGCAGGGCGCTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGQSSMS*CRALGQ
Trigger: CTGCCCGAGCGCCCTGCACCAACTCATGCTGGACTG...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCTGACAAGCAGAAGTGGCTaGGCACTTACTCCATCATCA +
Preference number: 4 (lower is better)
Translates to: APLGSSRGPWPPGEWLALTSRSG*ALTPSS
Trigger: TGATGATGGAGTAAGTGCCCAGCCACTTCTGCTTGT...CAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp CATGATCTATTCCTCACCCTCCAGATCACCCCACTTGGCTGGTGGGGCCGGTGGTGGCTGGCCCTGCAGTaGATAGAGCACCAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: HDLFLTLQITPLGWWGRWWLALQ*IEHQEG
Trigger: GCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGCCA...CCACCGGCCCCACCAGCCAAGTGGGGTGATCTGGAGGGTGAGGAATAGATCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp CCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGTGGCCCGTGGCCTCCTaGCGAGTGGCTGGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: PSFELHVFLVTSRGWHRLWPVAS*RVAGPA
Trigger: TGCAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCA...CAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp CACAGGCACCTCTGCCGTGTGGCCTCCCAGCTCTGGAAGGCAGTGACTAAGATTGTGGCTGGCACCGCTTaGTTCTTCCCGTGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: HRHLCRVASQLWKAVTKIVAGTA*FFPWPV
Trigger: CACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC...AATCTTAGTCACTGCCTTCCAGAGCTGGGAGGCCACACGGCAGAGGTGCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CACAGGCACCTCTGCCGTGTGGCCTCCCAGCTCTGGAAGGCAGTGACTAAGATTGGCTTTGGTGAGGCCTaGTGGCAGGTGGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: HRHLCRVASQLWKAVTKIGFGEA*WQVGGG
Trigger: CCCTCCTCCCACCTGCCACCAGGCCTCACCAAAGCC...AATCTTAGTCACTGCCTTCCAGAGCTGGGAGGCCACACGGCAGAGGTGCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CAGACGATGGGCTGTGCTGTGCTGGATGTTCACTCTGACCGTGGCGCTTCTAGCGGCTTTGGTGAGGCCTaGTGGCAGGTGGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: QTMGCAVLDVHSDRGASSGFGEA*WQVGGG
Trigger: CCCTCCTCCCACCTGCCACCAGGCCTCACCAAAGCC...GCTAGAAGCGCCACGGTCAGAGTGAACATCCAGCACAGCACAGCCCATCGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TACCAACTGTGTGCAGAGCAGCCGGAAACTCCCCTAACACTGCTGGGCAGGCGGGCCCAGATGGCCCCATaGCAGTGGGCTTTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: YQLCAEQPETPLTLLGRRAQMAP*QWALVR
Trigger: CCTCACCAAAGCCCACTGCCATGGGGCCATCTGGGC...CCGCCTGCCCAGCAGTGTTAGGGGAGTTTCCGGCTGCTCTGCACACAGTTGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGCCCTGAGTCCCTTAAGTGTCTCCTACTGCCCCGCCACCCGGGTCCCTGCTCTCAAAGTGAAGGCCAGTaGGCCACTGCCGGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: SPESLKCLLLPRHPGPCSQSEGQ*ATAGQF
Trigger: AAACTGGCCGGCAGTGGCCCACTGGCCTTCACTTTG...AGAGCAGGGACCCGGGTGGCGGGGCAGTAGGAGACACTTAAGGGACTCAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGCCCTGAGTCCCTTAAGTGTCTCCTACTGCCCCGCCACCCGGGTCCCTGCTCTGAAGCCCCTAGATGGTaGCAGGGTGGGGACCAACTA +
Preference number: 4 (lower is better)
Translates to: SPESLKCLLLPRHPGPCSEAPRW*QGGDQL
Trigger: TAGTTGGTCCCCACCCTGCCACCATCTAGGGGCTTC...AGAGCAGGGACCCGGGTGGCGGGGCAGTAGGAGACACTTAAGGGACTCAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGAGGATTTCCATGTCTaGAGGAATCTCCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: VAGTAWFFPWPVASWRVAEDFHV*RNLLEE
Trigger: CTCCTCCAGGAGATTCCTCCAGACATGGAAATCCTC...AGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CCA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGATACTCAGCTGTAGCCTaGAACAGCCAGCCCCTTTTA +
Preference number: 4 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRYSAVA*NSQPLL
Trigger: TAAAAGGGGCTGGCTGTTCCAGGCTACAGCTGAGTA...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374630.8
3UTR CAA 72 bp CATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTaGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGT +
Preference number: 4 (lower is better)
Translates to: HVFLVTSRGWHR*VLPVARGLLAS
Trigger: ACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACCACCTCTTCCCACCCTaGTGGAGGATGCACCATCCA +
Preference number: 4 (lower is better)
Translates to: RGMLARVSERTLWRAGYHHLFPP*WRMHHP
Trigger: TGGATGGTGCATCCTCCATCAGGGTGGGAAGAGGTG...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TGGCCCTGCAGCTTCCTTGCTGCAGGGAGGGAAATTCCACCCCAGATGAGTCCCTTCACAGAGGCGAACTaGGGCGAGAAGGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: WPCSFLAAGREIPPQMSPFTEAN*GEKGLW
Trigger: CCAGAGCCCCTTCTCGCCTCAGTTCGCCTCTGTGAA...GGGACTCATCTGGGGTGGAATTTCCCTCCCTGCAGCAAGGAAGCTGCAGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGATTCCCTATTGGGACATaGTCTATTCCTCACCCTCCA +
Preference number: 4 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRFPIGT*SIPHPP
Trigger: TGGAGGGTGAGGAATAGATCATGTCCCAATAGGGAA...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR TCA 90 bp GGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTCTGAGGGAGGTGCTATaGTTTGACCAAGGTCACAGA +
Preference number: 4 (lower is better)
Translates to: GDVSWLAPLGSSRGPWPPLREVL*FDQGHR
Trigger: TCTGTGACCTTGGTCAAATCATAGCACCTCCCTCAG...AGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR TCA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACCGCTTGGTTGTTGAGTaGGGCCTAGAGGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RGMLARVSERTLWRAGYHRLVVE*GLEEQQ
Trigger: CTGCTGCTCCTCTAGGCCTCACTCAACAACCAAGCG...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TACCAACTGTGTGCAGAGCAGCCGGAAACTCCCCTAACACTGCTGGGCAGGCGGGCCAGGCTGTGCGCGTaGTATGTACCTGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: YQLCAEQPETPLTLLGRRARLCA*YVPGAA
Trigger: TGCAGCTCCAGGTACATATCACGCGCACAGCCTGGC...CCGCCTGCCCAGCAGTGTTAGGGGAGTTTCCGGCTGCTCTGCACACAGTTGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CAGCTGGTGAGATTTCCTTGGTCACAGCAGTGGGGTCCGGAGGAGCCAGGTCTGGCCAGGCTGTGCGCGTaGTATGTACCTGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: QLVRFPWSQQWGPEEPGLARLCA*YVPGAA
Trigger: TGCAGCTCCAGGTACATATCACGCGCACAGCCTGGC...CAGACCTGGCTCCTCCGGACCCCACTGCTGTGACCAAGGAAATCTCACCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TGCCCCCTGCCCATCAGAGTCCCTCTCCACAGAGGGGAAAGCGGCCAGGCTGATGAGGGAGAGGACTGCTaGGCACCAACAATGACCCAT +
Preference number: 4 (lower is better)
Translates to: CPLPIRVPLHRGESGQADEGEDC*APTMTH
Trigger: ATGGGTCATTGTTGGTGCTCAGCAGTCCTCTCCCTC...ATCAGCCTGGCCGCTTTCCCCTCTGTGGAGAGGGACTCTGATGGGCAGGGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACGCTACCCTGCGGTCATaGCGCACTTTCCCTAGCATC +
Preference number: 4 (lower is better)
Translates to: RGMLARVSERTLWRAGYHATLRS*RTFPSI
Trigger: GATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGC...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CTCCCGGAACAGGTGAGTGACAGACGATGGGCTGTGCTGTGCTGGATGTTCACTCACAGCCCATGGCTCTaGCAGCAGCTCCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LPEQVSDRRWAVLCWMFTHSPWL*QQLQGG
Trigger: GCCTCCCTGGAGCTGCTGTCAGAGCCATGGGCTGTG...AGTGAACATCCAGCACAGCACAGCCCATCGTCTGTCACTCACCTGTTCCGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGTCATCTCCACGTGGATaGGGTGGGCGCCACGGCGCC +
Preference number: 4 (lower is better)
Translates to: PSFELHVFLVTSRGWHRLSSPRG*GGRHGA
Trigger: GGCGCCGTGGCGCCCACCGCATCCACGTGGAGATGA...CAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp CATGATCTATTCCTCACCCTCCAGATCACCCCACTTGGCTGGTGGGGCCGGTGGGCACGCTGGGGATGCTaGTGCAGTCACGCACCGAAA +
Preference number: 4 (lower is better)
Translates to: HDLFLTLQITPLGWWGRWARWGC*CSHAPK
Trigger: TTTCGGTGCGTGACTGCAGCAGCATCCCCAGCGTGC...CCACCGGCCCCACCAGCCAAGTGGGGTGATCTGGAGGGTGAGGAATAGATCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR GCA 90 bp GGAAACAGGGTTCTGGGAAACCCTGCCAGACAGCCCCATACCCTGGTTGAGAGCCCAGGTAGAAGCCGCTaGGGGACACAGGTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: GNRVLGNPARQPHTLVESPGRSR*GTQVRS
Trigger: GCTTCGGACCTGTGTCCCGCAGCGGCTTCTACCTGG...GCTCTCAACCAGGGTATGGGGCTGTCTGGCAGGGTTTCCCAGAACCCTGTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGCATTGGCGATGCAGCTaGCCCGGGCAGCCACCAGCG +
Preference number: 4 (lower is better)
Translates to: PSFELHVFLVTSRGWHRLHWRCS*PGQPPA
Trigger: CGCTGGTGGCTGCCCGGGGCAGCTGCATCGCCAATG...CAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp CTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTTTGCATTGGCGATGCAGCTaGCCCGGGCAGCCACCAGCG +
Preference number: 4 (lower is better)
Translates to: LRVSSTPYFMGPNLRLGLHWRCS*PGQPPA
Trigger: CGCTGGTGGCTGCCCGGGGCAGCTGCATCGCCAATG...CAAACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCTCTGGAAGTACATCTTaGCGCTGTAGCGCCCGTAAC +
Preference number: 4 (lower is better)
Translates to: LVTSRGWHRLVLPVARGLSGSTS*RCSARN
Trigger: GTTACGGGCGCTACAGCGGCAAGATGTACTTCCAGA...GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp GCAGCTGGTCCCCATTTCCACGGTGCCCTGGCCTGTGTTTACAAGGCAGCTTTCTGTAGTCGGGGATCGTaGGGTCCAGCAGCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: AAGPHFHGALACVYKAAFCSRGS*GPAAAG
Trigger: ACCTGCCGCTGCTGGACCGCACGATCCCCGACTACA...GAAAGCTGCCTTGTAAACACAGGCCAGGGCACCGTGGAAATGGGGACCAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGACGGGAAGCACCGACTaGCAGCCCCATGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGTGSTD*QPHVGP
Trigger: GGGCCCCACATGGGGCTGGCAGTCGGTGCTTCCCGT...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GCCAGGAAAGGATTAGTAACCAGGCAGCGGGTGGCTCAGAGCTGTGTGCCTGGGGCCTCCGAGGGGGTGTaGCCGGAGTTGACTCTCTTT +
Preference number: 4 (lower is better)
Translates to: ARKGLVTRQRVAQSCVPGASEGV*PELTLF
Trigger: AAAGAGAGTCAACTCCGGGCACACCCCCTCGGAGGC...CCCAGGCACACAGCTCTGAGCCACCCGCTGCCTGGTTACTAATCCTTTCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTGAGCCAGTGGGGCCCTaGTTGGTTCCTAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: ESSGLHSSGWGRHFRRRSEPVGP*LVPRST
Trigger: GGTGGACCTAGGAACCAAGCAGGGCCCCACTGGCTC...ACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACTTGAGAGCTCCGGTCTaGATAGCTCAGGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: RGMLARVSERTLWRAGYHLRAPV*IAQAGA
Trigger: TGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAA...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TGGCGAGTGGCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGCGTAGCCAGTTGTTCTaGCTTGACTCAAACACGTTG +
Preference number: 4 (lower is better)
Translates to: WRVAGPAVDRAPGGPARGRSQLF*LDSNTL
Trigger: CAACGTGTTTGAGTCAAGCCAGAACAACTGGCTACG...CCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGCCACTCGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp CATGATCTATTCCTCACCCTCCAGATCACCCCACTTGGCTGGTGGGGCCGGTGGAACTTCATCTCCACGTaGATGCGGTGGGCGCCACGG +
Preference number: 4 (lower is better)
Translates to: HDLFLTLQITPLGWWGRWNFIST*MRWAPR
Trigger: CCGTGGCGCCCACCGCATCCACGTGGAGATGAAGTT...CCACCGGCCCCACCAGCCAAGTGGGGTGATCTGGAGGGTGAGGAATAGATCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp CTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTTCTCGTCGGCTGCAATaGTATCCACCTTCACCCATG +
Preference number: 4 (lower is better)
Translates to: LGDVSWLAPLGSSRGPWPSRRLQ*YPPSPM
Trigger: CATGGGTGAAGGTGGATACCATTGCAGCCGACGAGA...AGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACGGCAGACACAGTTGGTaGCCCCTTCAGAAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: RGMLARVSERTLWRAGYHGRHSW*PLQKWS
Trigger: GGACCACTTCTGAAGGGGCCACCAACTGTGTCTGCC...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TGCCCCCTGCCCATCAGAGTCCCTCTCCACAGAGGGGAAAGCGGCCAGGCTGATAAGGTGTACTGGGTGTaGGCCAGCAGGTCACTGATG +
Preference number: 4 (lower is better)
Translates to: CPLPIRVPLHRGESGQADKVYWV*ASRSLM
Trigger: CATCAGTGACCTGCTGGCCCACACCCAGTACACCTT...ATCAGCCTGGCCGCTTTCCCCTCTGTGGAGAGGGACTCTGATGGGCAGGGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTCCCGGAACAGGTGAGTGACAGACGATGGGCTGTGCTGTGCTGGATGTTCACTCCAGGATCACGCCATTaGGCTGGTCCGGCTGGGACC +
Preference number: 4 (lower is better)
Translates to: LPEQVSDRRWAVLCWMFTPGSRH*AGPAGT
Trigger: GGTCCCAGCCGGACCAGCCCAATGGCGTGATCCTGG...AGTGAACATCCAGCACAGCACAGCCCATCGTCTGTCACTCACCTGTTCCGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTTCCTGGATGCTTGTCTaGTACTCGGCTTCTGTCATG +
Preference number: 4 (lower is better)
Translates to: GDVSWLAPLGSSRGPWPPSWMLV*YSASVM
Trigger: CATGACAGAAGCCGAGTACCAGACAAGCATCCAGGA...AGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp CTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTGGAGCCGATGATGAGTaGCAACTTCTCCTGGATGCT +
Preference number: 4 (lower is better)
Translates to: LGDVSWLAPLGSSRGPWPGADDE*QLLLDA
Trigger: AGCATCCAGGAGAAGTTGCCACTCATCATCGGCTCC...AGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp CCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGACCCCACTTGGCTGGTaGGGCCGGTGGAGAGGGGGT +
Preference number: 4 (lower is better)
Translates to: PSFELHVFLVTSRGWHRLTPLGW*GRWRGG
Trigger: ACCCCCTCTCCACCGGCCCCACCAGCCAAGTGGGGT...CAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp TGGCGAGTGGCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGTGCGCCCGCATCACCTaGATACTGTTCAGGATTTTT +
Preference number: 4 (lower is better)
Translates to: WRVAGPAVDRAPGGPARGCARIT*ILFRIF
Trigger: AAAAATCCTGAACAGTATCCAGGTGATGCGGGCGCA...CCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGCCACTCGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp CCATCTCCTCGGATCTGGGAAAGGTCCCGAGAGGTAGTCTCCTTGGCTCCCCTTTGGCTGGCCCTGCAGTaGATAGAGCACCAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PSPRIWERSREVVSLAPLWLALQ*IEHQEG
Trigger: GCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGCCA...AAGGGGAGCCAAGGAGACTACCTCTCGGGACCTTTCCCAGATCCGAGGAGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CCA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCTCTTCCCGTGGCCCGTaGCCTCCTGGCGAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPSSRGP*PPGEWL
Trigger: CAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGA...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp CTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCGCTTTTGTCTCCGATTaGACACATCGCATGAATCTC +
Preference number: 4 (lower is better)
Translates to: LAPLGSSRGPWPPGEWLAAFVSD*THRMNL
Trigger: GAGATTCATGCGATGTGTCCAATCGGAGACAAAAGC...GGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp TGGCCCTGCAGCTTCCTTGCTGCAGGGAGGGAAATTCCACCCCAGATGAGTCCCATGGCCCCATGGCAGTaGGCTTTGGTGAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: WPCSFLAAGREIPPQMSPMAPWQ*ALVRPG
Trigger: ACCAGGCCTCACCAAAGCCCACTGCCATGGGGCCAT...GGGACTCATCTGGGGTGGAATTTCCCTCCCTGCAGCAAGGAAGCTGCAGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GCCAGGAAAGGATTAGTAACCAGGCAGCGGGTGGCTCAGAGCTGTGTGCCTGGGCTGAGGGCGTCCCCATaGCCAAGACCTTTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: ARKGLVTRQRVAQSCVPGLRASP*PRPLGP
Trigger: TGGGCCTAAAGGTCTTGGCCATGGGGACGCCCTCAG...CCCAGGCACACAGCTCTGAGCCACCCGCTGCCTGGTTACTAATCCTTTCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGCCCTGAGTCCCTTAAGTGTCTCCTACTGCCCCGCCACCCGGGTCCCTGCTCTCAGACCCGATATCCATaGCACATCCATCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SPESLKCLLLPRHPGPCSQTRYP*HIHLPA
Trigger: GGCAGGGAGATGGATGTGCCATGGATATCGGGTCTG...AGAGCAGGGACCCGGGTGGCGGGGCAGTAGGAGACACTTAAGGGACTCAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TGCCCCCTGCCCATCAGAGTCCCTCTCCACAGAGGGGAAAGCGGCCAGGCTGATGTGAGTGACAGACGATaGGCTGTGCTGTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: CPLPIRVPLHRGESGQADVSDRR*AVLCWM
Trigger: CATCCAGCACAGCACAGCCCATCGTCTGTCACTCAC...ATCAGCCTGGCCGCTTTCCCCTCTGTGGAGAGGGACTCTGATGGGCAGGGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACCAAAGTGAAGGCCAGTaGGCCACTGCCGGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: RGMLARVSERTLWRAGYHQSEGQ*ATAGQF
Trigger: AAACTGGCCGGCAGTGGCCCACTGGCCTTCACTTTG...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGATGCGGGTGGGTAGCATaGCTCTCTCCTACCCAGCCT +
Preference number: 4 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGCGWVA*LSPTQP
Trigger: AGGCTGGGTAGGAGAGAGCCATGCTACCCACCCGCA...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGAGTAAGAGGCACTGCTaGTTAGTAAACAGCCATAGC +
Preference number: 4 (lower is better)
Translates to: GWHRLVLPVARGLLASGWSKRHC*LVNSHS
Trigger: GCTATGGCTGTTTACTAACCAGCAGTGCCTCTTACT...CCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CCA 90 bp CTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCGCTGAAGTGACTCTTTaGATTATCTGCGTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: LAPLGSSRGPWPPGEWLAAEVTL*IICVSE
Trigger: CTCACTGACGCAGATAATCCAAAGAGTCACTTCAGC...GGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CCA 90 bp AACCTCCTGAGATTAGCCTCCGAGGGGGTGTGCCCGGAGTTGACTCTCTTTCCTGGCACCTCTGCCGTGTaGCCTCCCAGCTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: NLLRLASEGVCPELTLFPGTSAV*PPSSGR
Trigger: CCTTCCAGAGCTGGGAGGCCACACGGCAGAGGTGCC...AGGAAAGAGAGTCAACTCCGGGCACACCCCCTCGGAGGCTAATCTCAGGAGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GCACGTGTGTTAGGGAAATATGCGGGTGAAGGGGTCCTGTGCCTGGTAGAGAGCAGACACGCACGGCGATaGGGGACATGCAGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: ARVLGKYAGEGVLCLVESRHARR*GTCSRH
Trigger: ATGGCGGCTGCATGTCCCTCATCGCCGTGCGTGTCT...GCTCTCTACCAGGCACAGGACCCCTTCACCCGCATATTTCCCTAACACACGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR TCA 90 bp TACCAACTGTGTGCAGAGCAGCCGGAAACTCCCCTAACACTGCTGGGCAGGCGGAAGTGGTCCGGCTGTTaGTGGGACAGTGGGTACAGG +
Preference number: 4 (lower is better)
Translates to: YQLCAEQPETPLTLLGRRKWSGC*WDSGYR
Trigger: CCTGTACCCACTGTCCCATCAACAGCCGGACCACTT...CCGCCTGCCCAGCAGTGTTAGGGGAGTTTCCGGCTGCTCTGCACACAGTTGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CAGACGATGGGCTGTGCTGTGCTGGATGTTCACTCTGACCGTGGCGCTTCTAGCGGGCCAGCAGGTCACTaGTGTAAATGCGTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: QTMGCAVLDVHSDRGASSGPAGH*CKCVAR
Trigger: CCGAGCCACGCATTTACATCAGTGACCTGCTGGCCC...GCTAGAAGCGCCACGGTCAGAGTGAACATCCAGCACAGCACAGCCCATCGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TCCCTCAACCTTCCTACCAACCCCCAGTTTGTAGGTGAGAAAACGGAGGCTGAGCCAGCAGCGGCAGGTTaGTGCCAGAGGAGAGGGGCG +
Preference number: 4 (lower is better)
Translates to: SLNLPTNPQFVGEKTEAEPAAAG*CQRRGA
Trigger: CGCCCCTCTCCTCTGGCATCAACCTGCCGCTGCTGG...CTCAGCCTCCGTTTTCTCACCTACAAACTGGGGGTTGGTAGGAAGGTTGAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR TCA 90 bp TGGCCAGCCAAAGTGACCCCAACCCGGAGAATGTCCCTTTGGGAGAGAAGCACGGAGGGGGTGCTAAGGTaGCAAGCAGAAGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: WPAKVTPTRRMSLWERSTEGVLR*QAEVAG
Trigger: CCCAGCCACTTCTGCTTGTCACCTTAGCACCCCCTC...CGTGCTTCTCTCCCAAAGGGACATTCTCCGGGTTGGGGTCACTTTGGCTGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR TCA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCATTGGACACATCGCATaGATCTCCCAAGCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGIGHIA*ISQALF
Trigger: AAAAAGGGCTTGGGAGATTCATGCGATGTGTCCAAT...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp CAGACGATGGGCTGTGCTGTGCTGGATGTTCACTCTGACCGTGGCGCTTCTAGCGGGTATCACAGTGAATaGTCCGGGTCCTGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: QTMGCAVLDVHSDRGASSGYHSE*SGSWPP
Trigger: CGGAGGCCAGGACCCGGATCATTCACTGTGATACCC...GCTAGAAGCGCCACGGTCAGAGTGAACATCCAGCACAGCACAGCCCATCGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GCAGCTGGTCCCCATTTCCACGGTGCCCTGGCCTGTGTTTACAAGGCAGCTTTCGGCAGGGTATCACAGTaGATGATCCGGGTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: AAGPHFHGALACVYKAAFGRVSQ*MIRVLA
Trigger: GGCCAGGACCCGGATCATTCACTGTGATACCCTGCC...GAAAGCTGCCTTGTAAACACAGGCCAGGGCACCGTGGAAATGGGGACCAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GGCCGCTCCGGGGGCAATTCCTTCTCGGGGAGAGGAGTAGCTGGGAGGCATCCTTCGAAGGCTGAGTTCTaGGCCACTTCCAACTCACTT +
Preference number: 4 (lower is better)
Translates to: GRSGGNSFSGRGVAGRHPSKAEF*ATSNSL
Trigger: AAGTGAGTTGGAAGTGGCTCAGAACTCAGCCTTCGA...AGGATGCCTCCCAGCTACTCCTCTCCCCGAGAAGGAATTGCCCCCGGAGCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACCAGGGCATCGAAGGCTaGGTTCTGAGCCACTTCCAA +
Preference number: 4 (lower is better)
Translates to: RGMLARVSERTLWRAGYHQGIEG*VLSHFQ
Trigger: TTGGAAGTGGCTCAGAACTCAGCCTTCGATGCCCTG...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TCTGCTACTTATGTACCTGCAGGGGCTCACCCTGATTCCCAGGGCATCGAAGGCGGCTCCCGGAACAGGTaGGTGACAGACGATGGGCTG +
Preference number: 4 (lower is better)
Translates to: SATYVPAGAHPDSQGIEGGSRNR*VTDDGL
Trigger: CAGCCCATCGTCTGTCACTCACCTGTTCCGGGAGCC...GCCTTCGATGCCCTGGGAATCAGGGTGAGCCCCTGCAGGTACATAAGTAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CCATCTCCTCGGATCTGGGAAAGGTCCCGAGAGGTAGTCTCCTTGGCTCCCCTTCTTTGGGGCACAAAGTaGAGGCCAGTGGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: PSPRIWERSREVVSLAPLLWGTK*RPVGHC
Trigger: GCAGTGGCCCACTGGCCTTCACTTTGTGCCCCAAAG...AAGGGGAGCCAAGGAGACTACCTCTCGGGACCTTTCCCAGATCCGAGGAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GCAGCTGGTCCCCATTTCCACGGTGCCCTGGCCTGTGTTTACAAGGCAGCTTTCTCTCCAGGACTAGGGTaGCCAGGGCAGGGATGGGTT +
Preference number: 4 (lower is better)
Translates to: AAGPHFHGALACVYKAAFSPGLG*PGQGWV
Trigger: AACCCATCCCTGCCCTGGTCACCCTAGTCCTGGAGA...GAAAGCTGCCTTGTAAACACAGGCCAGGGCACCGTGGAAATGGGGACCAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTCCTGGCTGGCCAGGTGTTGAGTaGACAGGTCTGGACCATAGC +
Preference number: 4 (lower is better)
Translates to: LSAPSGGQGITVNDPGPGWPGVE*TGLDHS
Trigger: GCTATGGTCCAGACCTGTTCACTCAACACCTGGCCA...GCCAGGACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTCCTGGCAAATTCCACCCCAGATaGGTCCCTCCCCAGACTGAG +
Preference number: 4 (lower is better)
Translates to: LSAPSGGQGITVNDPGPGKFHPR*VPPQTE
Trigger: CTCAGTCTGGGGAGGGACTCATCTGGGGTGGAATTT...GCCAGGACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TGGCCCTGCAGCTTCCTTGCTGCAGGGAGGGAAATTCCACCCCAGATGAGTCCCAGGCTGATGACGGAGTaGTTCACAGGCACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: WPCSFLAAGREIPPQMSPRLMTE*FTGTSA
Trigger: GGCAGAGGTGCCTGTGAATCACTCCGTCATCAGCCT...GGGACTCATCTGGGGTGGAATTTCCCTCCCTGCAGCAAGGAAGCTGCAGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACAAGGCTGGTTGTGAGTaGATGTCCCTGCCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: RGMLARVSERTLWRAGYHKAGCE*MSLPGL
Trigger: TAGGCCAGGCAGGGACATTCACTCACAACCAGCCTT...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CTAATCCCTTCCTTCCCTTTGCAGCTCAGGCTCCCGGAACAGGTGAGTGACAGACACAGCCCATGGCTCTaGCAGCAGCTCCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LIPSFPLQLRLPEQVSDRHSPWL*QQLQGG
Trigger: GCCTCCCTGGAGCTGCTGTCAGAGCCATGGGCTGTG...TCTGTCACTCACCTGTTCCGGGAGCCTGAGCTGCAAAGGGAAGGAAGGGATTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTCCTCGAAGCCTGCTTTaGACATGCAGCGCCCGATGG +
Preference number: 4 (lower is better)
Translates to: VSLSAPSGGQGITVNDPGPRSLL*TCSARW
Trigger: CCATCGGGCGCTGCATGTGCAAAGCAGGCTTCGAGG...ACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GGAAACAGGGTTCTGGGAAACCCTGCCAGACAGCCCCATACCCTGGTTGAGAGCAACGGCCTCGAAGCCTaGTTTGCACATGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: GNRVLGNPARQPHTLVESNGLEA*FAHAAP
Trigger: GGGCGCTGCATGTGCAAAGCAGGCTTCGAGGCCGTT...GCTCTCAACCAGGGTATGGGGCTGTCTGGCAGGGTTTCCCAGAACCCTGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CCATCTCCTCGGATCTGGGAAAGGTCCCGAGAGGTAGTCTCCTTGGCTCCCCTTAACGGCCTCGAAGCCTaGTTTGCACATGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: PSPRIWERSREVVSLAPLNGLEA*FAHAAP
Trigger: GGGCGCTGCATGTGCAAAGCAGGCTTCGAGGCCGTT...AAGGGGAGCCAAGGAGACTACCTCTCGGGACCTTTCCCAGATCCGAGGAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GCCAGGAAAGGATTAGTAACCAGGCAGCGGGTGGCTCAGAGCTGTGTGCCTGGGAACCTCGGCAGACGGTaGCATTCTCAACGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: ARKGLVTRQRVAQSCVPGNLGRR*HSQRPR
Trigger: TCGAGGCCGTTGAGAATGGCACCGTCTGCCGAGGTT...CCCAGGCACACAGCTCTGAGCCACCCGCTGCCTGGTTACTAATCCTTTCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TCTGCTACTTATGTACCTGCAGGGGCTCACCCTGATTCCCAGGGCATCGAAGGCCCGGCTTTGAGGCCCTaGACGGTGACCGTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: SATYVPAGAHPDSQGIEGPALRP*TVTVLV
Trigger: CACCAACACGGTCACCGTGCAGGGCCTCAAAGCCGG...GCCTTCGATGCCCTGGGAATCAGGGTGAGCCCCTGCAGGTACATAAGTAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CACAGAGAAAACCAGAGTTGGCTGTGCCTGGGGGTACATGAGCACTCTAAGACCGTAGCGCCCGTAACCTaGCACGGTGCGTGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: HRENQSWLCLGVHEHSKTVAPVT*HGACPH
Trigger: GTGCGGGCACGCACCGTGGCAGGTTACGGGCGCTAC...GGTCTTAGAGTGCTCATGTACCCCCAGGCACAGCCAACTCTGGTTTTCTCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GCACGTGTGTTAGGGAAATATGCGGGTGAAGGGGTCCTGTGCCTGGTAGAGAGCTGTAGTCGGGGATCGTaGGGTCCAGCAGCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: ARVLGKYAGEGVLCLVESCSRGS*GPAAAG
Trigger: ACCTGCCGCTGCTGGACCGCACGATCCCCGACTACA...GCTCTCTACCAGGCACAGGACCCCTTCACCCGCATATTTCCCTAACACACGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR GCA 90 bp TTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCGTGATCTCAGCTCACTaGAACCTCTACCTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LVTSRGWHRLVLPVARGLVISAH*NLYLLG
Trigger: ACCAAGGAGGTAGAGGTTGCAGTGAGCTGAGATCAC...GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR GCA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAACCGCAGAGCCATGGCTaGGCTTCCCGGGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKPQSHG*ASRGLG
Trigger: CCCGAGGCCCCGGGAAGCGCAGCCATGGCTCTGCGG...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR GCA 90 bp GTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGTAAACAAACCCAGATaGAGGATCAACCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: VAGTAWFFPWPVASWRVAVNKPR*RINPSQ
Trigger: CTGAGAAGGGTTGATCCTGCATCTGGGTTTGTTTAC...AGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR GCA 90 bp GGCCGCTCCGGGGGCAATTCCTTCTCGGGGAGAGGAGTAGCTGGGAGGCATCCTAGACCCTCTTCCGAGTaGACTCTCGTCAATTCTCTG +
Preference number: 4 (lower is better)
Translates to: GRSGGNSFSGRGVAGRHPRPSSE*TLVNSL
Trigger: CAGAGAATTGACGAGAGTGCACTCGGAAGAGGGTCT...AGGATGCCTCCCAGCTACTCCTCTCCCCGAGAAGGAATTGCCCCCGGAGCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TGGCCCTGCAGCTTCCTTGCTGCAGGGAGGGAAATTCCACCCCAGATGAGTCCCGCGCTTCTAGCTGGCTaGCTGTGGCCCGAATCTTTC +
Preference number: 4 (lower is better)
Translates to: WPCSFLAAGREIPPQMSPALLAG*LWPESF
Trigger: GAAAGATTCGGGCCACAGGCAGCCAGCTAGAAGCGC...GGGACTCATCTGGGGTGGAATTTCCCTCCCTGCAGCAAGGAAGCTGCAGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CAGACGATGGGCTGTGCTGTGCTGGATGTTCACTCTGACCGTGGCGCTTCTAGCCACAGCTCTGCTAGCTaGACCCTCCCAGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QTMGCAVLDVHSDRGASSHSSAS*TLPEQL
Trigger: CAGCTGCTCTGGGAGGGTGCAGCTAGCAGAGCTGTG...GCTAGAAGCGCCACGGTCAGAGTGAACATCCAGCACAGCACAGCCCATCGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AACCTCCTGAGATTAGCCTCCGAGGGGGTGTGCCCGGAGTTGACTCTCTTTCCTCTGAGCAATTTCTCATaGCCACCCGCACGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: NLLRLASEGVCPELTLFPLSNFS*PPARPP
Trigger: GGGCGGGCGTGCGGGTGGGCATGAGAAATTGCTCAG...AGGAAAGAGAGTCAACTCCGGGCACACCCCCTCGGAGGCTAATCTCAGGAGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGCCCTGAGTCCCTTAAGTGTCTCCTACTGCCCCGCCACCCGGGTCCCTGCTCTCAGGGAAAGACGTTCTaGACCCCACTCAAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SPESLKCLLLPRHPGPCSQGKTF*TPLKRR
Trigger: CCTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTG...AGAGCAGGGACCCGGGTGGCGGGGCAGTAGGAGACACTTAAGGGACTCAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCTCCCTGCCTGGCCTATaGTGGGCCAGCCTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPSLPGL*WASLRG
Trigger: GCCTCTGAGGCTGGCCCAGCATAGGCCAGGCAGGGA...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CCA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACGATTCTCCATCCAGTTaGGGAAGGTCTTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: RGMLARVSERTLWRAGYHDSPSS*GRSWWP
Trigger: CGGCCACCAAGACCTTCCCCAACTGGATGGAGAATC...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTATCCACCTTCACCCATaGATTCTCCATCCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: LGDVSWLAPLGSSRGPWPIHLHP*ILHPVG
Trigger: CCCAACTGGATGGAGAATCCATGGGTGAAGGTGGAT...AGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGACCCGACAGGGTTTCCTaGAAGATGGCGCCATTCTGG +
Preference number: 4 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGPDRVS*KMAPFW
Trigger: CCAGAATGGCGCCATCTTCCAGGAAACCCTGTCGGG...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGATCGGTCAGGCCTAGCTaGCGTGGTGCGTACTGTACA +
Preference number: 4 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGSVRPS*RGAYCT
Trigger: TGTACAGTACGCACCACGCCAGCTAGGCCTGACCGA...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TACCAACTGTGTGCAGAGCAGCCGGAAACTCCCCTAACACTGCTGGGCAGGCGGGATGGACACTGCCGATaGAGCTGCCTGGTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: YQLCAEQPETPLTLLGRRDGHCR*SCLVGG
Trigger: ACCACCAACCAGGCAGCTCCATCGGCAGTGTCCATC...CCGCCTGCCCAGCAGTGTTAGGGGAGTTTCCGGCTGCTCTGCACACAGTTGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CCATCTCCTCGGATCTGGGAAAGGTCCCGAGAGGTAGTCTCCTTGGCTCCCCTTTTGGGCTGGTCCGGCTaGGACCACGACAGGGTAATG +
Preference number: 4 (lower is better)
Translates to: PSPRIWERSREVVSLAPLLGWSG*DHDRVM
Trigger: CATTACCCTGTCGTGGTCCCAGCCGGACCAGCCCAA...AAGGGGAGCCAAGGAGACTACCTCTCGGGACCTTTCCCAGATCCGAGGAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTCCCGGAACAGGTGAGTGACAGACGATGGGCTGTGCTGTGCTGGATGTTCACTATCACGCCATTGGGCTaGTCCGGCTGGGACCACGAC +
Preference number: 4 (lower is better)
Translates to: LPEQVSDRRWAVLCWMFTITPLG*SGWDHD
Trigger: GTCGTGGTCCCAGCCGGACCAGCCCAATGGCGTGAT...AGTGAACATCCAGCACAGCACAGCCCATCGTCTGTCACTCACCTGTTCCGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTAATCCCTTCCTTCCCTTTGCAGCTCAGGCTCCCGGAACAGGTGAGTGACAGACCAGGATCACGCCATTaGGCTGGTCCGGCTGGGACC +
Preference number: 4 (lower is better)
Translates to: LIPSFPLQLRLPEQVSDRPGSRH*AGPAGT
Trigger: GGTCCCAGCCGGACCAGCCCAATGGCGTGATCCTGG...TCTGTCACTCACCTGTTCCGGGAGCCTGAGCTGCAAAGGGAAGGAAGGGATTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTACTCGGCTTCTGTCATaGTCTGGAAGTACATCTTGC +
Preference number: 4 (lower is better)
Translates to: GDVSWLAPLGSSRGPWPPTRLLS*SGSTSC
Trigger: GCAAGATGTACTTCCAGACCATGACAGAAGCCGAGT...AGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp CTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTAGTGGCAACTTCTCCTaGATGCTTGTCTGGTACTCG +
Preference number: 4 (lower is better)
Translates to: LGDVSWLAPLGSSRGPWPSGNFS*MLVWYS
Trigger: CGAGTACCAGACAAGCATCCAGGAGAAGTTGCCACT...AGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp AGAGCTTGTAGGTGGCAGGCAGACCTGGGTATCAGTCCACAGGTGACTCCAAAGCCAGATCACCCCACTTaGCTGGTGGGGCCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: RACRWQADLGISPQVTPKPDHPT*LVGPVE
Trigger: CTCCACCGGCCCCACCAGCCAAGTGGGGTGATCTGG...CTTTGGAGTCACCTGTGGACTGATACCCAGGTCTGCCTGCCACCTACAAGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp CTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTTTGGTGGCTGGCACCGCTTaGTTCTTCCCGTGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: LRVSSTPYFMGPNLRLGLVAGTA*FFPWPV
Trigger: CACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC...CAAACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTCCCGGAACAGGTGAGTGACAGACGATGGGCTGTGCTGTGCTGGATGTTCACTCTGGAGCTGCAGACCTaGGGGTTGCCCATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LPEQVSDRRWAVLCWMFTLELQT*GLPILR
Trigger: CCTGAGGATGGGCAACCCCCAGGTCTGCAGCTCCAG...AGTGAACATCCAGCACAGCACAGCCCATCGTCTGTCACTCACCTGTTCCGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AACCTCCTGAGATTAGCCTCCGAGGGGGTGTGCCCGGAGTTGACTCTCTTTCCTGCCCAGATGGCCCCATaGCAGTGGGCTTTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: NLLRLASEGVCPELTLFPAQMAP*QWALVR
Trigger: CCTCACCAAAGCCCACTGCCATGGGGCCATCTGGGC...AGGAAAGAGAGTCAACTCCGGGCACACCCCCTCGGAGGCTAATCTCAGGAGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GCCAGGAAAGGATTAGTAACCAGGCAGCGGGTGGCTCAGAGCTGTGTGCCTGGGGAGGGGCAGACATGCTaGCTAGTGGTCACCAGCTCA +
Preference number: 4 (lower is better)
Translates to: ARKGLVTRQRVAQSCVPGEGQTC*LVVTSS
Trigger: TGAGCTGGTGACCACTAGCCAGCATGTCTGCCCCTC...CCCAGGCACACAGCTCTGAGCCACCCGCTGCCTGGTTACTAATCCTTTCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTTGCAGGGGGCCATaGCCACTGAGGACCTCGGCC +
Preference number: 4 (lower is better)
Translates to: PSFELHVFLVTSRGWHRLVCRGP*PLRTSA
Trigger: GGCCGAGGTCCTCAGTGGCCATGGCCCCCTGCAAAC...CAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CCA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGTAGCACCTGTGCTCTaGGAAGCAGGTTTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGVAPVL*EAGLQG
Trigger: CCCCTGCAAACCTGCTTCCCAGAGCACAGGTGCTAC...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGCAGAGGGGGAGTCTTCCAGCCTTTaGTACCATCTTCAAACAACA +
Preference number: 4 (lower is better)
Translates to: AGPAVDRAPGGPARGAEGESSSL*YHLQTT
Trigger: TGTTGTTTGAAGATGGTACCAAAGGCTGGAAGACTC...CCCCTCTGCCCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CCA 90 bp GGCCGCTCCGGGGGCAATTCCTTCTCGGGGAGAGGAGTAGCTGGGAGGCATCCTCTGGCAGCTGCGTCTTaGAGTGACCTTTCTTTTGAC +
Preference number: 4 (lower is better)
Translates to: GRSGGNSFSGRGVAGRHPLAAAS*SDLSFD
Trigger: GTCAAAAGAAAGGTCACTCCAAGACGCAGCTGCCAG...AGGATGCCTCCCAGCTACTCCTCTCCCCGAGAAGGAATTGCCCCCGGAGCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGCCCTGAGTCCCTTAAGTGTCTCCTACTGCCCCGCCACCCGGGTCCCTGCTCTTGTGTTGGACCATTCTaGCAGCTGCGTCTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: SPESLKCLLLPRHPGPCSCVGPF*QLRLGV
Trigger: CACTCCAAGACGCAGCTGCCAGAATGGTCCAACACA...AGAGCAGGGACCCGGGTGGCGGGGCAGTAGGAGACACTTAAGGGACTCAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGCCCTGAGTCCCTTAAGTGTCTCCTACTGCCCCGCCACCCGGGTCCCTGCTCTCTCAAGAACCTGCTGTaGCTGGACTGTACATCACGC +
Preference number: 4 (lower is better)
Translates to: SPESLKCLLLPRHPGPCSLKNLL*LDCTSR
Trigger: GCGTGATGTACAGTCCAGCCACAGCAGGTTCTTGAG...AGAGCAGGGACCCGGGTGGCGGGGCAGTAGGAGACACTTAAGGGACTCAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTCCTGGCGTCAAGGCCACCCGGTaGTGTATTCGCATGCGTATG +
Preference number: 4 (lower is better)
Translates to: LSAPSGGQGITVNDPGPGVKATR*CIRMRM
Trigger: CATACGCATGCGAATACACCACCGGGTGGCCTTGAC...GCCAGGACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TGCCCCCTGCCCATCAGAGTCCCTCTCCACAGAGGGGAAAGCGGCCAGGCTGATCTACCCCCTACTTCATaGGTCCTAATCTGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: CPLPIRVPLHRGESGQADLPPTS*VLICVW
Trigger: CCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAG...ATCAGCCTGGCCGCTTTCCCCTCTGTGGAGAGGGACTCTGATGGGCAGGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACGAAGGCACCTGGCTCTaGAGTTTGCAGCAACACCCT +
Preference number: 4 (lower is better)
Translates to: RGMLARVSERTLWRAGYHEGTWL*SLQQHP
Trigger: AGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCTTC...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTCCTGGCCAGAGGGAAGGCACCTaGCTCTGGAGTTTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: LSAPSGGQGITVNDPGPGQREGT*LWSLQQ
Trigger: TTGCTGCAAACTCCAGAGCCAGGTGCCTTCCCTCTG...GCCAGGACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTGGGGCGAAGGCTGTGTaGCCATGGAAGCTATGTCCC +
Preference number: 4 (lower is better)
Translates to: ESSGLHSSGWGRHFRRRSGAKAV*PWKLCP
Trigger: GGGACATAGCTTCCATGGCCACACAGCCTTCGCCCC...ACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TGCCCCCTGCCCATCAGAGTCCCTCTCCACAGAGGGGAAAGCGGCCAGGCTGATGTGGCCTCCCAGCTCTaGAAGGCAGTGACTAAGATT +
Preference number: 4 (lower is better)
Translates to: CPLPIRVPLHRGESGQADVASQL*KAVTKI
Trigger: AATCTTAGTCACTGCCTTCCAGAGCTGGGAGGCCAC...ATCAGCCTGGCCGCTTTCCCCTCTGTGGAGAGGGACTCTGATGGGCAGGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CAGACGATGGGCTGTGCTGTGCTGGATGTTCACTCTGACCGTGGCGCTTCTAGCGTGAATGTCCCTGCCTaGCCTATGCTGGGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: QTMGCAVLDVHSDRGASSVNVPA*PMLGQP
Trigger: AGGCTGGCCCAGCATAGGCCAGGCAGGGACATTCAC...GCTAGAAGCGCCACGGTCAGAGTGAACATCCAGCACAGCACAGCCCATCGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CAA 72 bp CCTCGGATCTGGGAAAGGTCCCGAGAGGTAGTCTCCTaGGCTCCCCTTCCTCAGCCAGACCCGATATCCATG +
Preference number: 4 (lower is better)
Translates to: PRIWERSREVVS*APLPQPDPISM
Trigger: CATGGATATCGGGTCTGGCTGAGGAAGGGGAGCCAAGGAGACTACCTCTCGGGACCTTTCCCAGATCCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CAA 72 bp CCTTTGCTCTCTCTCTCCTCCAGGAAAAGCCGTGTCTaGGTCTGGGTAGCCGGGCTTGGTAGTGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: PLLSLSSRKSRV*VWVAGLGSGGG
Trigger: CCCACCACCACTACCAAGCCCGGCTACCCAGACCAAGACACGGCTTTTCCTGGAGGAGAGAGAGAGCAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AGGAAGGGCTGCTTAGAAGAGCAACCCTTAGCACCTGGGTCACGTGCATCCCAAAGACACGCACGGCGATaGGGGACATGCAGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: RKGCLEEQPLAPGSRASQRHARR*GTCSRH
Trigger: ATGGCGGCTGCATGTCCCTCATCGCCGTGCGTGTCT...TTGGGATGCACGTGACCCAGGTGCTAAGGGTTGCTCTTCTAAGCAGCCCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GCACGTGTGTTAGGGAAATATGCGGGTGAAGGGGTCCTGTGCCTGGTAGAGAGCACGGTGCGGCTCACCTaGTGCATGATGGACACTGCC +
Preference number: 4 (lower is better)
Translates to: ARVLGKYAGEGVLCLVESTVRLT*CMMDTA
Trigger: GGCAGTGTCCATCATGCATCAGGTGAGCCGCACCGT...GCTCTCTACCAGGCACAGGACCCCTTCACCCGCATATTTCCCTAACACACGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR TCA 90 bp TTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCTCTTGTCTAGCGTGTTaGCAATTTGGCCGAACTTGG +
Preference number: 4 (lower is better)
Translates to: LVTSRGWHRLVLPVARGLSCLAC*QFGRTW
Trigger: CCAAGTTCGGCCAAATTGTCAACACGCTAGACAAGA...GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp CTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTTCTTGTCTAGCGTGTTaGCAATTTGGCCGAACTTGG +
Preference number: 4 (lower is better)
Translates to: LGDVSWLAPLGSSRGPWPSCLAC*QFGRTW
Trigger: CCAAGTTCGGCCAAATTGTCAACACGCTAGACAAGA...AGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp CTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTTTGGGGGCGCCATGGCTTTaGGGCTGTTGGGATTGCGGA +
Preference number: 4 (lower is better)
Translates to: LRVSSTPYFMGPNLRLGLGAPWL*GCWDCG
Trigger: TCCGCAATCCCAACAGCCTCAAAGCCATGGCGCCCC...CAAACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CCATCTCCTCGGATCTGGGAAAGGTCCCGAGAGGTAGTCTCCTTGGCTCCCCTTGCTTGGAGGAAGAGGTaGGCCGAGGCAGGTGAATGT +
Preference number: 4 (lower is better)
Translates to: PSPRIWERSREVVSLAPLAWRKR*AEAGEC
Trigger: ACATTCACCTGCCTCGGCTCACCTCTTCCTCCAAGC...AAGGGGAGCCAAGGAGACTACCTCTCGGGACCTTTCCCAGATCCGAGGAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR TCA 90 bp TGGCCCTGCAGCTTCCTTGCTGCAGGGAGGGAAATTCCACCCCAGATGAGTCCCCCCCTTTCAGCCCTGTaGGCCAACAGGAGAAACAGT +
Preference number: 4 (lower is better)
Translates to: WPCSFLAAGREIPPQMSPPLSAL*ANRRNS
Trigger: ACTGTTTCTCCTGTTGGCTCACAGGGCTGAAAGGGG...GGGACTCATCTGGGGTGGAATTTCCCTCCCTGCAGCAAGGAAGCTGCAGGGCCA
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GCCAGGAAAGGATTAGTAACCAGGCAGCGGGTGGCTCAGAGCTGTGTGCCTGGGTGGGTTTTGACCATCTaGGGGCACTCAGGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: ARKGLVTRQRVAQSCVPGWVLTI*GHSGAS
Trigger: TGAGGCTCCTGAGTGCCCTCAGATGGTCAAAACCCA...CCCAGGCACACAGCTCTGAGCCACCCGCTGCCTGGTTACTAATCCTTTCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GTTCCCACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCTGCAGGGGCTCACCCTaGTTCCCAGGGCATCGAAGG +
Preference number: 4 (lower is better)
Translates to: VPTMTAHLTLRPSSECTLCRGSP*FPGHRR
Trigger: CCTTCGATGCCCTGGGAATCAGGGTGAGCCCCTGCA...GAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGTGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGGGGGTGGAAGAGATGTaGGCAGCGCCTGTACCCCTG +
Preference number: 4 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGGVEEM*AAPVPL
Trigger: CAGGGGTACAGGCGCTGCTCACATCTCTTCCACCCC...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTGGGGTGGAAGAGATGTaGGCAGCGCCTGTACCCCTG +
Preference number: 4 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGGVEEM*AAPVPL
Trigger: CAGGGGTACAGGCGCTGCTCACATCTCTTCCACCCC...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GGAAACAGGGTTCTGGGAAACCCTGCCAGACAGCCCCATACCCTGGTTGAGAGCTTGGAGATGAGCCCCTaGTGGGAGAGGAGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: GNRVLGNPARQPHTLVESLEMSP*WERSVR
Trigger: CCTCACACTCCTCTCCCATCAGGGGCTCATCTCCAA...GCTCTCAACCAGGGTATGGGGCTGTCTGGCAGGGTTTCCCAGAACCCTGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CTCCCGGAACAGGTGAGTGACAGACGATGGGCTGTGCTGTGCTGGATGTTCACTCGCCTGGCCAGGTGTTaGGTGAACAGGTCTGGACCA +
Preference number: 4 (lower is better)
Translates to: LPEQVSDRRWAVLCWMFTRLARC*VNRSGP
Trigger: TGGTCCAGACCTGTTCACTCAACACCTGGCCAGGCG...AGTGAACATCCAGCACAGCACAGCCCATCGTCTGTCACTCACCTGTTCCGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CACAGGCACCTCTGCCGTGTGGCCTCCCAGCTCTGGAAGGCAGTGACTAAGATTACCCCCAGGAAGGCCTaGTGCATGCAATTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: HRHLCRVASQLWKAVTKITPRKA*CMQFCH
Trigger: GTGGCAGAATTGCATGCATCAGGCCTTCCTGGGGGT...AATCTTAGTCACTGCCTTCCAGAGCTGGGAGGCCACACGGCAGAGGTGCCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TGGCCCTGCAGCTTCCTTGCTGCAGGGAGGGAAATTCCACCCCAGATGAGTCCCAAATTCCACCCCAGATaGGTCCCTCCCCAGACTGAG +
Preference number: 4 (lower is better)
Translates to: WPCSFLAAGREIPPQMSPKFHPR*VPPQTE
Trigger: CTCAGTCTGGGGAGGGACTCATCTGGGGTGGAATTT...GGGACTCATCTGGGGTGGAATTTCCCTCCCTGCAGCAAGGAAGCTGCAGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CACAGAGAAAACCAGAGTTGGCTGTGCCTGGGGGTACATGAGCACTCTAAGACCCAGCCACCAGCGATGTaGTCTCAGCCCCCGACAGGG +
Preference number: 4 (lower is better)
Translates to: HRENQSWLCLGVHEHSKTQPPAM*SQPPTG
Trigger: CCCTGTCGGGGGCTGAGAGCACATCGCTGGTGGCTG...GGTCTTAGAGTGCTCATGTACCCCCAGGCACAGCCAACTCTGGTTTTCTCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGAGCTTGTAGGTGGCAGGCAGACCTGGGTATCAGTCCACAGGTGACTCCAAAGCGGAGGGGATGGTTGTaGAGGGCATGTCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: RACRWQADLGISPQVTPKRRGWL*RACPGG
Trigger: ACCCCCTGGACATGCCCTGCACAACCATCCCCTCCG...CTTTGGAGTCACCTGTGGACTGATACCCAGGTCTGCCTGCCACCTACAAGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR GCA 90 bp CCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGCCGGCTTTGAGGCCCTaGACGGTGACCGTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: PSFELHVFLVTSRGWHRLPALRP*TVTVLV
Trigger: CACCAACACGGTCACCGTGCAGGGCCTCAAAGCCGG...CAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp TGCCCCCTGCCCATCAGAGTCCCTCTCCACAGAGGGGAAAGCGGCCAGGCTGATGCAACTTCTCCTGGATaGTTGTCTGGTACTCGGCTT +
Preference number: 4 (lower is better)
Translates to: CPLPIRVPLHRGESGQADATSPG*LSGTRL
Trigger: AAGCCGAGTACCAGACAAGCATCCAGGAGAAGTTGC...ATCAGCCTGGCCGCTTTCCCCTCTGTGGAGAGGGACTCTGATGGGCAGGGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CTCCCGGAACAGGTGAGTGACAGACGATGGGCTGTGCTGTGCTGGATGTTCACTGCTTCAGGTGGCCACTaGAGACCTCGCCAAACTCCC +
Preference number: 4 (lower is better)
Translates to: LPEQVSDRRWAVLCWMFTASGGH*RPRQTP
Trigger: GGGAGTTTGGCGAGGTCTGCAGTGGCCACCTGAAGC...AGTGAACATCCAGCACAGCACAGCCCATCGTCTGTCACTCACCTGTTCCGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCAAAAATTCTTCTGTTTaGCCAGTGGTGGCAGGAATA +
Preference number: 4 (lower is better)
Translates to: LAPLGSSRGPWPPGEWLAKNSSV*PVVAGI
Trigger: TATTCCTGCCACCACTGGGCAAACAGAAGAATTTTT...GGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp GAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTGGAAGGGAAGAGGCATaGTTGCCCGTGTCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: ESSGLHSSGWGRHFRRRSGREEA*LPVSLS
Trigger: GCTCAGAGACACGGGCAAGCATGCCTCTTCCCTTCC...ACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CAGACGATGGGCTGTGCTGTGCTGGATGTTCACTCTGACCGTGGCGCTTCTAGCAGCACCTGGGTCACGTaGATCCCAAGGGTACCAAGG +
Preference number: 4 (lower is better)
Translates to: QTMGCAVLDVHSDRGASSSTWVT*IPRVPR
Trigger: CCTTGGTACCCTTGGGATGCACGTGACCCAGGTGCT...GCTAGAAGCGCCACGGTCAGAGTGAACATCCAGCACAGCACAGCCCATCGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GCAGCTGGTCCCCATTTCCACGGTGCCCTGGCCTGTGTTTACAAGGCAGCTTTCAGCACCTGGGTCACGTaGATCCCAAGGGTACCAAGG +
Preference number: 4 (lower is better)
Translates to: AAGPHFHGALACVYKAAFSTWVT*IPRVPR
Trigger: CCTTGGTACCCTTGGGATGCACGTGACCCAGGTGCT...GAAAGCTGCCTTGTAAACACAGGCCAGGGCACCGTGGAAATGGGGACCAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TCTGCTACTTATGTACCTGCAGGGGCTCACCCTGATTCCCAGGGCATCGAAGGCTCTGGGAAGCAGGTTTaGAGGGGGCCATGGCCACTG +
Preference number: 4 (lower is better)
Translates to: SATYVPAGAHPDSQGIEGSGKQV*RGPWPL
Trigger: CAGTGGCCATGGCCCCCTGCAAACCTGCTTCCCAGA...GCCTTCGATGCCCTGGGAATCAGGGTGAGCCCCTGCAGGTACATAAGTAGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTCCTGGCGTGTTTTGCACAGCCTaGCTCACCCAGTCCAATGCT +
Preference number: 4 (lower is better)
Translates to: LSAPSGGQGITVNDPGPGVFCTA*LTQSNA
Trigger: AGCATTGGACTGGGTGAGGCAGGCTGTGCAAAACAC...GCCAGGACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GTTCCCACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCCTGAGCAATTTCTCATaGCCACCCGCACGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: VPTMTAHLTLRPSSECTLLSNFS*PPARPP
Trigger: GGGCGGGCGTGCGGGTGGGCATGAGAAATTGCTCAG...GAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGTGGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTCCTGGCCAGGGAAAGACGTTCTaGACCCCACTCAAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: LSAPSGGQGITVNDPGPGQGKTF*TPLKRR
Trigger: CCTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTG...GCCAGGACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GCAGCTGGTCCCCATTTCCACGGTGCCCTGGCCTGTGTTTACAAGGCAGCTTTCGGTTCTGGGAAACCCTaGCAGACAGCCCCATACCCT +
Preference number: 4 (lower is better)
Translates to: AAGPHFHGALACVYKAAFGSGKP*QTAPYP
Trigger: AGGGTATGGGGCTGTCTGGCAGGGTTTCCCAGAACC...GAAAGCTGCCTTGTAAACACAGGCCAGGGCACCGTGGAAATGGGGACCAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TCTGCTACTTATGTACCTGCAGGGGCTCACCCTGATTCCCAGGGCATCGAAGGCAACTTCATCTCCACGTaGATGCGGTGGGCGCCACGG +
Preference number: 4 (lower is better)
Translates to: SATYVPAGAHPDSQGIEGNFIST*MRWAPR
Trigger: CCGTGGCGCCCACCGCATCCACGTGGAGATGAAGTT...GCCTTCGATGCCCTGGGAATCAGGGTGAGCCCCTGCAGGTACATAAGTAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CAGCTGGTGAGATTTCCTTGGTCACAGCAGTGGGGTCCGGAGGAGCCAGGTCTGGATTCTCCATCCAGTTaGGGAAGGTCTTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: QLVRFPWSQQWGPEEPGLDSPSS*GRSWWP
Trigger: CGGCCACCAAGACCTTCCCCAACTGGATGGAGAATC...CAGACCTGGCTCCTCCGGACCCCACTGCTGTGACCAAGGAAATCTCACCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TGCCCCCTGCCCATCAGAGTCCCTCTCCACAGAGGGGAAAGCGGCCAGGCTGATATCCACCTTCACCCATaGATTCTCCATCCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: CPLPIRVPLHRGESGQADIHLHP*ILHPVG
Trigger: CCCAACTGGATGGAGAATCCATGGGTGAAGGTGGAT...ATCAGCCTGGCCGCTTTCCCCTCTGTGGAGAGGGACTCTGATGGGCAGGGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TACCAACTGTGTGCAGAGCAGCCGGAAACTCCCCTAACACTGCTGGGCAGGCGGAAGATGGCGCCATTCTaGATGATGCGGGGGCACTTG +
Preference number: 4 (lower is better)
Translates to: YQLCAEQPETPLTLLGRRKMAPF*MMRGHL
Trigger: CAAGTGCCCCCGCATCATCCAGAATGGCGCCATCTT...CCGCCTGCCCAGCAGTGTTAGGGGAGTTTCCGGCTGCTCTGCACACAGTTGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGGAGCAGGCTGCTACCCTGCGGTCATGACGCACTTTCCCTAGCATCATGTGGTCTGGAAATCACAGCCTaGGGCGCGGAGGGGATGGTT +
Preference number: 4 (lower is better)
Translates to: RSRLLPCGHDALSLASCGLEITA*GAEGMV
Trigger: AACCATCCCCTCCGCGCCCCAGGCTGTGATTTCCAG...ACCACATGATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGCAGCCTGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GGAAACAGGGTTCTGGGAAACCCTGCCAGACAGCCCCATACCCTGGTTGAGAGCTCGGTCAGGCCTAGCTaGCGTGGTGCGTACTGTACA +
Preference number: 4 (lower is better)
Translates to: GNRVLGNPARQPHTLVESSVRPS*RGAYCT
Trigger: TGTACAGTACGCACCACGCCAGCTAGGCCTGACCGA...GCTCTCAACCAGGGTATGGGGCTGTCTGGCAGGGTTTCCCAGAACCCTGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAACGCCGTTCACAGCCTaGATCTCGAAGGTGTACTGG +
Preference number: 4 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGTPFTA*ISKVYW
Trigger: CCAGTACACCTTCGAGATCCAGGCTGTGAACGGCGT...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GCACGTGTGTTAGGGAAATATGCGGGTGAAGGGGTCCTGTGCCTGGTAGAGAGCTTGGGCTGGTCCGGCTaGGACCACGACAGGGTAATG +
Preference number: 4 (lower is better)
Translates to: ARVLGKYAGEGVLCLVESLGWSG*DHDRVM
Trigger: CATTACCCTGTCGTGGTCCCAGCCGGACCAGCCCAA...GCTCTCTACCAGGCACAGGACCCCTTCACCCGCATATTTCCCTAACACACGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp AACCTCCTGAGATTAGCCTCCGAGGGGGTGTGCCCGGAGTTGACTCTCTTTCCTTTGGGCTGGTCCGGCTaGGACCACGACAGGGTAATG +
Preference number: 4 (lower is better)
Translates to: NLLRLASEGVCPELTLFPLGWSG*DHDRVM
Trigger: CATTACCCTGTCGTGGTCCCAGCCGGACCAGCCCAA...AGGAAAGAGAGTCAACTCCGGGCACACCCCCTCGGAGGCTAATCTCAGGAGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGATCACGCCATTGGGCTaGTCCGGCTGGGACCACGAC +
Preference number: 4 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGITPLG*SGWDHD
Trigger: GTCGTGGTCCCAGCCGGACCAGCCCAATGGCGTGAT...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GCCAGGAAAGGATTAGTAACCAGGCAGCGGGTGGCTCAGAGCTGTGTGCCTGGGTCACAGGTGTGCTCTTaGTCACGACACCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: ARKGLVTRQRVAQSCVPGSQVCS*SRHPPG
Trigger: ACCTGGAGGGTGTCGTGACCAAGAGCACACCTGTGA...CCCAGGCACACAGCTCTGAGCCACCCGCTGCCTGGTTACTAATCCTTTCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGTTCCGCCCAGGGCACTaGTGTAGGTGGGGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: PSFELHVFLVTSRGWHRLFRPGH*CRWGLR
Trigger: CCTCAGACCCCACCTACACCAGTGCCCTGGGCGGAA...CAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GCCAGGAAAGGATTAGTAACCAGGCAGCGGGTGGCTCAGAGCTGTGTGCCTGGGAGCGTGTTGACAATTTaGCCGAACTTGGGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: ARKGLVTRQRVAQSCVPGSVLTI*PNLGRW
Trigger: CCACCGGCCCAAGTTCGGCCAAATTGTCAACACGCT...CCCAGGCACACAGCTCTGAGCCACCCGCTGCCTGGTTACTAATCCTTTCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTTCTGAAAGTGTTTCTTaGCTCTGGCCAGGTCACCTT +
Preference number: 4 (lower is better)
Translates to: LGDVSWLAPLGSSRGPWPSESVS*LWPGHL
Trigger: AAGGTGACCTGGCCAGAGCCAAGAAACACTTTCAGA...AGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp TCTGCTACTTATGTACCTGCAGGGGCTCACCCTGATTCCCAGGGCATCGAAGGCATGGCCCCATGGCAGTaGGCTTTGGTGAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: SATYVPAGAHPDSQGIEGMAPWQ*ALVRPG
Trigger: ACCAGGCCTCACCAAAGCCCACTGCCATGGGGCCAT...GCCTTCGATGCCCTGGGAATCAGGGTGAGCCCCTGCAGGTACATAAGTAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TACCAACTGTGTGCAGAGCAGCCGGAAACTCCCCTAACACTGCTGGGCAGGCGGTCAACAGTCCTGGAGTaGGAAGCTCCTCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: YQLCAEQPETPLTLLGRRSTVLE*EAPPPW
Trigger: CCAAGGTGGAGGAGCTTCCCACTCCAGGACTGTTGA...CCGCCTGCCCAGCAGTGTTAGGGGAGTTTCCGGCTGCTCTGCACACAGTTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GGCCGCTCCGGGGGCAATTCCTTCTCGGGGAGAGGAGTAGCTGGGAGGCATCCTACTGATTGCTCTGCTTaGGTGTCTGTGTTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: GRSGGNSFSGRGVAGRHPTDCSA*VSVLVH
Trigger: GTGAACCAACACAGACACCCAAGCAGAGCAATCAGT...AGGATGCCTCCCAGCTACTCCTCTCCCCGAGAAGGAATTGCCCCCGGAGCGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GCAGCTGGTCCCCATTTCCACGGTGCCCTGGCCTGTGTTTACAAGGCAGCTTTCGCAACCCTTAGCACCTaGGTCACGTGCATCCCAAGG +
Preference number: 4 (lower is better)
Translates to: AAGPHFHGALACVYKAAFATLST*VTCIPR
Trigger: CCTTGGGATGCACGTGACCCAGGTGCTAAGGGTTGC...GAAAGCTGCCTTGTAAACACAGGCCAGGGCACCGTGGAAATGGGGACCAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTGAGGGGCAGACATGCTaGCTAGTGGTCACCAGCTCA +
Preference number: 4 (lower is better)
Translates to: ESSGLHSSGWGRHFRRRSEGQTC*LVVTSS
Trigger: TGAGCTGGTGACCACTAGCCAGCATGTCTGCCCCTC...ACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp ACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCGTCAATCAGCAAGCAAGAGGTTaGGGCGGGGCGACTGCCCCG +
Preference number: 4 (lower is better)
Translates to: TMTAHLTLRPSSECTLVNQQARG*GGATAP
Trigger: CGGGGCAGTCGCCCCGCCCCAACCTCTTGCTTGCTG...ATTGACGAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGGAGTGGGCAGGCGGGGGCTaGCACTTGGGGAGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: CNSATLPGKDVLHPTQKEWAGGG*HLGRLS
Trigger: GCTCAACCTCCCCAAGTGCCAGCCCCCGCCTGCCCA...CTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTTCGCAGTTGATATTTTaGATATCATCCCCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GDVSWLAPLGSSRGPWPPSQLIF*ISSPRE
Trigger: CTCCCTCGGGGATGATATCCAAAATATCAACTGCGA...AGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CCA 90 bp GCAGCTGGTCCCCATTTCCACGGTGCCCTGGCCTGTGTTTACAAGGCAGCTTTCAGAGAAGCCCCTAGATaGTGGCAGGGTGGGGACCAA +
Preference number: 4 (lower is better)
Translates to: AAGPHFHGALACVYKAAFREAPR*WQGGDQ
Trigger: TTGGTCCCCACCCTGCCACCATCTAGGGGCTTCTCT...GAAAGCTGCCTTGTAAACACAGGCCAGGGCACCGTGGAAATGGGGACCAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGGAAGGGCTGCTTAGAAGAGCAACCCTTAGCACCTGGGTCACGTGCATCCCAAGGCAGGAGGATTAACTaGGCAGGGCGGGAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: RKGCLEEQPLAPGSRASQGRRIN*AGRELP
Trigger: TGGGAGCTCCCGCCCTGCCCAGTTAATCCTCCTGCC...TTGGGATGCACGTGACCCAGGTGCTAAGGGTTGCTCTTCTAAGCAGCCCTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TACCAACTGTGTGCAGAGCAGCCGGAAACTCCCCTAACACTGCTGGGCAGGCGGCCCAAGGCAAATTCCTaGCCCTGCAGCTTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: YQLCAEQPETPLTLLGRRPKANS*PCSFLA
Trigger: AGCAAGGAAGCTGCAGGGCCAGGAATTTGCCTTGGG...CCGCCTGCCCAGCAGTGTTAGGGGAGTTTCCGGCTGCTCTGCACACAGTTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GCCAGGAAAGGATTAGTAACCAGGCAGCGGGTGGCTCAGAGCTGTGTGCCTGGGCAGAGGGAAGGCACCTaGCTCTGGAGTTTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: ARKGLVTRQRVAQSCVPGQREGT*LWSLQQ
Trigger: TTGCTGCAAACTCCAGAGCCAGGTGCCTTCCCTCTG...CCCAGGCACACAGCTCTGAGCCACCCGCTGCCTGGTTACTAATCCTTTCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TCTGCTACTTATGTACCTGCAGGGGCTCACCCTGATTCCCAGGGCATCGAAGGCGTGAATGTCCCTGCCTaGCCTATGCTGGGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SATYVPAGAHPDSQGIEGVNVPA*PMLGQP
Trigger: AGGCTGGCCCAGCATAGGCCAGGCAGGGACATTCAC...GCCTTCGATGCCCTGGGAATCAGGGTGAGCCCCTGCAGGTACATAAGTAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GCAGCTGGTCCCCATTTCCACGGTGCCCTGGCCTGTGTTTACAAGGCAGCTTTCGTTGGGCACGGTGCCTaGCACATTGCTGGCACTCAA +
Preference number: 4 (lower is better)
Translates to: AAGPHFHGALACVYKAAFVGHGA*HIAGTQ
Trigger: TTGAGTGCCAGCAATGTGCCAGGCACCGTGCCCAAC...GAAAGCTGCCTTGTAAACACAGGCCAGGGCACCGTGGAAATGGGGACCAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GGAAACAGGGTTCTGGGAAACCCTGCCAGACAGCCCCATACCCTGGTTGAGAGCCCCCTTGGTTGGCCTTaGAAGTCCCAGATGGACAAC +
Preference number: 4 (lower is better)
Translates to: GNRVLGNPARQPHTLVESPLGWP*KSQMDN
Trigger: GTTGTCCATCTGGGACTTTCAAGGCCAACCAAGGGG...GCTCTCAACCAGGGTATGGGGCTGTCTGGCAGGGTTTCCCAGAACCCTGTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AGAGCTTGTAGGTGGCAGGCAGACCTGGGTATCAGTCCACAGGTGACTCCAAAGGGGCCAGCAGGTCACTaGTGTAAATGCGTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: RACRWQADLGISPQVTPKGPAGH*CKCVAR
Trigger: CCGAGCCACGCATTTACATCAGTGACCTGCTGGCCC...CTTTGGAGTCACCTGTGGACTGATACCCAGGTCTGCCTGCCACCTACAAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR TCA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCTTCACAGAGGCGAACTaGGGCGAGAAGGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPFTEAN*GEKGLW
Trigger: CCAGAGCCCCTTCTCGCCTCAGTTCGCCTCTGTGAA...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp CCATCTCCTCGGATCTGGGAAAGGTCCCGAGAGGTAGTCTCCTTGGCTCCCCTTCTGCCTGGTTGGTGGTaGTGTTCACAGAGGCGAACT +
Preference number: 4 (lower is better)
Translates to: PSPRIWERSREVVSLAPLLPGWW*CSQRRT
Trigger: AGTTCGCCTCTGTGAACATCACCACCAACCAGGCAG...AAGGGGAGCCAAGGAGACTACCTCTCGGGACCTTTCCCAGATCCGAGGAGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GCACGTGTGTTAGGGAAATATGCGGGTGAAGGGGTCCTGTGCCTGGTAGAGAGCGGCTCACCTGATGCATaGTGGACACTGCCGATGGAG +
Preference number: 4 (lower is better)
Translates to: ARVLGKYAGEGVLCLVESGSPDA*WTLPME
Trigger: CTCCATCGGCAGTGTCCATCATGCATCAGGTGAGCC...GCTCTCTACCAGGCACAGGACCCCTTCACCCGCATATTTCCCTAACACACGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR TCA 90 bp CTCCCGGAACAGGTGAGTGACAGACGATGGGCTGTGCTGTGCTGGATGTTCACTGGCTCACCTGATGCATaGTGGACACTGCCGATGGAG +
Preference number: 4 (lower is better)
Translates to: LPEQVSDRRWAVLCWMFTGSPDA*WTLPME
Trigger: CTCCATCGGCAGTGTCCATCATGCATCAGGTGAGCC...AGTGAACATCCAGCACAGCACAGCCCATCGTCTGTCACTCACCTGTTCCGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TCCTTCCTCATGGGACTAAGGTGTATAAGTGTTTTGCACAGCCTGCCTCACCCACCAGCAGCGGCAGGTTaGTGCCAGAGGAGAGGGGCG +
Preference number: 4 (lower is better)
Translates to: SFLMGLRCISVLHSLPHPPAAAG*CQRRGA
Trigger: CGCCCCTCTCCTCTGGCATCAACCTGCCGCTGCTGG...TGGGTGAGGCAGGCTGTGCAAAACACTTATACACCTTAGTCCCATGAGGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GGAAACAGGGTTCTGGGAAACCCTGCCAGACAGCCCCATACCCTGGTTGAGAGCTGCATGTTTTCTTGGTaGCGTCTCGTGGCTGGCACC +
Preference number: 4 (lower is better)
Translates to: GNRVLGNPARQPHTLVESCMFSW*RLVAGT
Trigger: GGTGCCAGCCACGAGACGTCACCAAGAAAACATGCA...GCTCTCAACCAGGGTATGGGGCTGTCTGGCAGGGTTTCCCAGAACCCTGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CCATCTCCTCGGATCTGGGAAAGGTCCCGAGAGGTAGTCTCCTTGGCTCCCCTTTGGGTTTTGACCATCTaGGGGCACTCAGGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: PSPRIWERSREVVSLAPLWVLTI*GHSGAS
Trigger: TGAGGCTCCTGAGTGCCCTCAGATGGTCAAAACCCA...AAGGGGAGCCAAGGAGACTACCTCTCGGGACCTTTCCCAGATCCGAGGAGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGGGGTATCACAGTGAATaGTCCGGGTCCTGGCCTCCG +
Preference number: 4 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGGYHSE*SGSWPP
Trigger: CGGAGGCCAGGACCCGGATCATTCACTGTGATACCC...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTCCTGGCTCGAAGGCTGAGTTCTaGGCCACTTCCAACTCACTT +
Preference number: 4 (lower is better)
Translates to: LSAPSGGQGITVNDPGPGSKAEF*ATSNSL
Trigger: AAGTGAGTTGGAAGTGGCTCAGAACTCAGCCTTCGA...GCCAGGACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GTTCCCACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCCCCGGAACAGGTGAGTaGCAGACGATGGGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: VPTMTAHLTLRPSSECTLPGTGE*QTMGCA
Trigger: AGCACAGCCCATCGTCTGTCACTCACCTGTTCCGGG...GAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGTGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGGCACTTGGGGAGGTTaGGCCAGGAAAGGATTAGTA +
Preference number: 4 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGGTWGG*ARKGLV
Trigger: TACTAATCCTTTCCTGGCTCAACCTCCCCAAGTGCC...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TCTGCTACTTATGTACCTGCAGGGGCTCACCCTGATTCCCAGGGCATCGAAGGCCCAGCCTTTTGGAGATaGGCCCCTGATGGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: SATYVPAGAHPDSQGIEGPAFWR*APDGRG
Trigger: TCCTCTCCCATCAGGGGCTCATCTCCAAAAGGCTGG...GCCTTCGATGCCCTGGGAATCAGGGTGAGCCCCTGCAGGTACATAAGTAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AACCTCCTGAGATTAGCCTCCGAGGGGGTGTGCCCGGAGTTGACTCTCTTTCCTCACTTACTGGCTGTGTaGCCTGGGAGAGCCACCATG +
Preference number: 4 (lower is better)
Translates to: NLLRLASEGVCPELTLFPHLLAV*PGRATM
Trigger: CATGGTGGCTCTCCCAGGTCACACAGCCAGTAAGTG...AGGAAAGAGAGTCAACTCCGGGCACACCCCCTCGGAGGCTAATCTCAGGAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TCTGCTACTTATGTACCTGCAGGGGCTCACCCTGATTCCCAGGGCATCGAAGGCACAGTGGAGAGGGGCTaGGTGTGTACCACTGGTAGC +
Preference number: 4 (lower is better)
Translates to: SATYVPAGAHPDSQGIEGTVERG*VCTTGS
Trigger: GCTACCAGTGGTACACACTCAGCCCCTCTCCACTGT...GCCTTCGATGCCCTGGGAATCAGGGTGAGCCCCTGCAGGTACATAAGTAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TGGCCCTGCAGCTTCCTTGCTGCAGGGAGGGAAATTCCACCCCAGATGAGTCCCCTTGGACACAGCTGGTaGGATTTCCTTGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: WPCSFLAAGREIPPQMSPLGHSW*DFLGHS
Trigger: GCTGTGACCAAGGAAATCTCACCAGCTGTGTCCAAG...GGGACTCATCTGGGGTGGAATTTCCCTCCCTGCAGCAAGGAAGCTGCAGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AACCTCCTGAGATTAGCCTCCGAGGGGGTGTGCCCGGAGTTGACTCTCTTTCCTCACCCTGATGGAGGATaGACCATCCAGCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: NLLRLASEGVCPELTLFPHPDGG*TIQPSS
Trigger: TGAGCTGGGCTGGATGGTGCATCCTCCATCAGGGTG...AGGAAAGAGAGTCAACTCCGGGCACACCCCCTCGGAGGCTAATCTCAGGAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp ACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCGTCAATCTTCCGCATTGGCGATaGAGCTGCCCCGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: TMTAHLTLRPSSECTLVNLPHWR*SCPGQP
Trigger: TGGCTGCCCGGGGCAGCTGCATCGCCAATGCGGAAG...ATTGACGAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CTCCCGGAACAGGTGAGTGACAGACGATGGGCTGTGCTGTGCTGGATGTTCACTAACCTCGGCAGACGGTaGCATTCTCAACGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: LPEQVSDRRWAVLCWMFTNLGRR*HSQRPR
Trigger: TCGAGGCCGTTGAGAATGGCACCGTCTGCCGAGGTT...AGTGAACATCCAGCACAGCACAGCCCATCGTCTGTCACTCACCTGTTCCGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CTCCCGGAACAGGTGAGTGACAGACGATGGGCTGTGCTGTGCTGGATGTTCACTCAGGGGGTCCAGGTCTaGTCTGTAGTAGCCATTGCG +
Preference number: 4 (lower is better)
Translates to: LPEQVSDRRWAVLCWMFTQGVQV*SVVAIA
Trigger: CGCAATGGCTACTACAGAGCAGACCTGGACCCCCTG...AGTGAACATCCAGCACAGCACAGCCCATCGTCTGTCACTCACCTGTTCCGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCCCTGACCTTGTGATCTaGCCGCCTCGGCCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPPDLVI*PPRPPN
Trigger: ATTGGGAGGCCGAGGCGGGCAGATCACAAGGTCAGG...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR GCA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGGTGAAGGGGTCCTGTaGCTGGTAGAGAGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPGEGVL*LVESCL
Trigger: CAGGCAGCTCTCTACCAGGCACAGGACCCCTTCACC...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR GCA 90 bp GAGCCAGACTTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCCGCAGAGCCATGGCTaGGCTTCCCGGGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: EPDFLGSNPGSSIYDLCDPQSHG*ASRGLG
Trigger: CCCGAGGCCCCGGGAAGCGCAGCCATGGCTCTGCGG...GTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAAGTCTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR GCA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCCGCAAGAACAGTCATTaGTTTCCTTATGAGAATCCT +
Preference number: 4 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGRKNSH*FPYENP
Trigger: AGGATTCTCATAAGGAAAGCAATGACTGTTCTTGCG...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp GGAAACAGGGTTCTGGGAAACCCTGCCAGACAGCCCCATACCCTGGTTGAGAGCATATGTACCTGGAGCTaGAGACCTGGGGGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: GNRVLGNPARQPHTLVESICTWS*RPGGCP
Trigger: TGGGCAACCCCCAGGTCTGCAGCTCCAGGTACATAT...GCTCTCAACCAGGGTATGGGGCTGTCTGGCAGGGTTTCCCAGAACCCTGTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TCTGCTACTTATGTACCTGCAGGGGCTCACCCTGATTCCCAGGGCATCGAAGGCGCGCTTCTAGCTGGCTaGCTGTGGCCCGAATCTTTC +
Preference number: 4 (lower is better)
Translates to: SATYVPAGAHPDSQGIEGALLAG*LWPESF
Trigger: GAAAGATTCGGGCCACAGGCAGCCAGCTAGAAGCGC...GCCTTCGATGCCCTGGGAATCAGGGTGAGCCCCTGCAGGTACATAAGTAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CTCTGCAGACATCAGGGCAGTTTGTTATGGGGGAAGAGTCAAGTGAGGATTTCCGTGTGCCGAGACAGCTaGCACCCGCGCAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: LCRHQGSLLWGKSQVRISVCRDS*HPRRAP
Trigger: AGGTGCCCTGCGCGGGTGGCAGCTGTCTCGGCACAC...GGAAATCCTCACTTGACTCTTCCCCCATAACAAACTGCCCTGATGTCTGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTTCTGGGAAGCAGGTTTaGAGGGGGCCATGGCCACTG +
Preference number: 4 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGSGKQV*RGPWPL
Trigger: CAGTGGCCATGGCCCCCTGCAAACCTGCTTCCCAGA...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGATCCCCATTTCCACGGTaGCCTGGCCTGTGTTTACAA +
Preference number: 4 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGSPFPR*PGLCLQ
Trigger: TTGTAAACACAGGCCAGGGCACCGTGGAAATGGGGA...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AACCTCCTGAGATTAGCCTCCGAGGGGGTGTGCCCGGAGTTGACTCTCTTTCCTAGCAGGCTGCTACCCTaGGGTCATGACGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: NLLRLASEGVCPELTLFPSRLLP*GHDALS
Trigger: GGAAAGTGCGTCATGACCGCAGGGTAGCAGCCTGCT...AGGAAAGAGAGTCAACTCCGGGCACACCCCCTCGGAGGCTAATCTCAGGAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGCCCTGAGTCCCTTAAGTGTCTCCTACTGCCCCGCCACCCGGGTCCCTGCTCTCCTCACCCAGTCCAATaGTCTCATTTTACAGATGGC +
Preference number: 4 (lower is better)
Translates to: SPESLKCLLLPRHPGPCSPHPVQ*SHFTDG
Trigger: GCCATCTGTAAAATGAGAGCATTGGACTGGGTGAGG...AGAGCAGGGACCCGGGTGGCGGGGCAGTAGGAGACACTTAAGGGACTCAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TGGCCCTGCAGCTTCCTTGCTGCAGGGAGGGAAATTCCACCCCAGATGAGTCCCTCATGGGTCCTAATCTaGGTCTGGGTTTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: WPCSFLAAGREIPPQMSPSWVLI*VWVWAS
Trigger: GGATGCCCAAACCCAGACGCAGATTAGGACCCATGA...GGGACTCATCTGGGGTGGAATTTCCCTCCCTGCAGCAAGGAAGCTGCAGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGGAGCAGGCTGCTACCCTGCGGTCATGACGCACTTTCCCTAGCATCATGTGGTGCCCTGCAGCTTCCTTaGTGCAGGGAGGGAAATTCC +
Preference number: 4 (lower is better)
Translates to: RSRLLPCGHDALSLASCGALQLP*CREGNS
Trigger: GGAATTTCCCTCCCTGCAGCAAGGAAGCTGCAGGGC...ACCACATGATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGCAGCCTGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GTTCCCACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCCAACTTGGTGCCCCCTaGCCATCAGAGTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: VPTMTAHLTLRPSSECTLQLGAP*PSESLS
Trigger: GGAGAGGGACTCTGATGGGCAGGGGGCACCAAGTTG...GAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGTGGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GCAGCTGGTCCCCATTTCCACGGTGCCCTGGCCTGTGTTTACAAGGCAGCTTTCTGGGGAAGGTCTTGGTaGCCGAGTCAAAGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: AAGPHFHGALACVYKAAFWGRSW*PSQSQP
Trigger: AGGCTGACTTTGACTCGGCCACCAAGACCTTCCCCA...GAAAGCTGCCTTGTAAACACAGGCCAGGGCACCGTGGAAATGGGGACCAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TGGCCCTGCAGCTTCCTTGCTGCAGGGAGGGAAATTCCACCCCAGATGAGTCCCCTTGAAAGTCCCAGATaGACAACCTCGGCAGACGGT +
Preference number: 4 (lower is better)
Translates to: WPCSFLAAGREIPPQMSPLESPR*TTSADG
Trigger: ACCGTCTGCCGAGGTTGTCCATCTGGGACTTTCAAG...GGGACTCATCTGGGGTGGAATTTCCCTCCCTGCAGCAAGGAAGCTGCAGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTCAGGCCTCATCCCCTTaGTTGGCCTTGAAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: VSLSAPSGGQGITVNDPGQASSP*LALKVP
Trigger: TGGGACTTTCAAGGCCAACCAAGGGGATGAGGCCTG...ACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GCACGTGTGTTAGGGAAATATGCGGGTGAAGGGGTCCTGTGCCTGGTAGAGAGCGGCAGACACAGTTGGTaGCCCCTTCAGAAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: ARVLGKYAGEGVLCLVESGRHSW*PLQKWS
Trigger: GGACCACTTCTGAAGGGGCCACCAACTGTGTCTGCC...GCTCTCTACCAGGCACAGGACCCCTTCACCCGCATATTTCCCTAACACACGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp CCATCTCCTCGGATCTGGGAAAGGTCCCGAGAGGTAGTCTCCTTGGCTCCCCTTATCTCGAAGGTGTACTaGGTGTGGGCCAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: PSPRIWERSREVVSLAPLISKVY*VWASRS
Trigger: TGACCTGCTGGCCCACACCCAGTACACCTTCGAGAT...AAGGGGAGCCAAGGAGACTACCTCTCGGGACCTTTCCCAGATCCGAGGAGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GCACGTGTGTTAGGGAAATATGCGGGTGAAGGGGTCCTGTGCCTGGTAGAGAGCGGCGAGAAGGGGCTCTaGTCAGTAACGCCGTTCACA +
Preference number: 4 (lower is better)
Translates to: ARVLGKYAGEGVLCLVESGEKGL*SVTPFT
Trigger: TGTGAACGGCGTTACTGACCAGAGCCCCTTCTCGCC...GCTCTCTACCAGGCACAGGACCCCTTCACCCGCATATTTCCCTAACACACGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp GTTCCCACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCGTGACGTCTCGTGGCTaGCACCGCTTGGTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: VPTMTAHLTLRPSSECTLVTSRG*HRLVLP
Trigger: GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCAC...GAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGTGGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AACCTCCTGAGATTAGCCTCCGAGGGGGTGTGCCCGGAGTTGACTCTCTTTCCTCTTGGTGACGTCTCGTaGCTGGCACCGCTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: NLLRLASEGVCPELTLFPLGDVS*LAPLGS
Trigger: AGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG...AGGAAAGAGAGTCAACTCCGGGCACACCCCCTCGGAGGCTAATCTCAGGAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CCATCTCCTCGGATCTGGGAAAGGTCCCGAGAGGTAGTCTCCTTGGCTCCCCTTCCATCTCCTCGGATCTaGGAAAGGTCCCGAGAGGTA +
Preference number: 4 (lower is better)
Translates to: PSPRIWERSREVVSLAPLPSPRI*ERSREV
Trigger: TACCTCTCGGGACCTTTCCCAGATCCGAGGAGATGG...AAGGGGAGCCAAGGAGACTACCTCTCGGGACCTTTCCCAGATCCGAGGAGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CAGCTGGTGAGATTTCCTTGGTCACAGCAGTGGGGTCCGGAGGAGCCAGGTCTGCTGCCGGCCAGTTTGTaGGAAACCTGCCAATGCTTT +
Preference number: 4 (lower is better)
Translates to: QLVRFPWSQQWGPEEPGLLPASL*ETCQCF
Trigger: AAAGCATTGGCAGGTTTCCCACAAACTGGCCGGCAG...CAGACCTGGCTCCTCCGGACCCCACTGCTGTGACCAAGGAAATCTCACCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AACCTCCTGAGATTAGCCTCCGAGGGGGTGTGCCCGGAGTTGACTCTCTTTCCTCAGCGCCTGTACCCCTaGGACAGTCACAGTGACATC +
Preference number: 4 (lower is better)
Translates to: NLLRLASEGVCPELTLFPQRLYP*DSHSDI
Trigger: GATGTCACTGTGACTGTCCCAGGGGTACAGGCGCTG...AGGAAAGAGAGTCAACTCCGGGCACACCCCCTCGGAGGCTAATCTCAGGAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCTGCGGGTGGGTAGCATaGCTCTCTCCTACCCAGCCT +
Preference number: 4 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPCGWVA*LSPTQP
Trigger: AGGCTGGGTAGGAGAGAGCCATGCTACCCACCCGCA...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CCA 90 bp GGCCGCTCCGGGGGCAATTCCTTCTCGGGGAGAGGAGTAGCTGGGAGGCATCCTAGTAAGAGGCACTGCTaGTTAGTAAACAGCCATAGC +
Preference number: 4 (lower is better)
Translates to: GRSGGNSFSGRGVAGRHPSKRHC*LVNSHS
Trigger: GCTATGGCTGTTTACTAACCAGCAGTGCCTCTTACT...AGGATGCCTCCCAGCTACTCCTCTCCCCGAGAAGGAATTGCCCCCGGAGCGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACGTCCTAATCTGCGTCTaGGTTTGGGCATCCTATCTG +
Preference number: 4 (lower is better)
Translates to: RGMLARVSERTLWRAGYHVLICV*VWASYL
Trigger: CAGATAGGATGCCCAAACCCAGACGCAGATTAGGAC...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TGCCCCCTGCCCATCAGAGTCCCTCTCCACAGAGGGGAAAGCGGCCAGGCTGATTGCAGCAACACCCTGTaGTTGTCCAGTGTTAAGACT +
Preference number: 4 (lower is better)
Translates to: CPLPIRVPLHRGESGQADCSNTL*LSSVKT
Trigger: AGTCTTAACACTGGACAACCACAGGGTGTTGCTGCA...ATCAGCCTGGCCGCTTTCCCCTCTGTGGAGAGGGACTCTGATGGGCAGGGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GTTCCCACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCGGGGCGAAGGCTGTGTaGCCATGGAAGCTATGTCCC +
Preference number: 4 (lower is better)
Translates to: VPTMTAHLTLRPSSECTLGAKAV*PWKLCP
Trigger: GGGACATAGCTTCCATGGCCACACAGCCTTCGCCCC...GAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGTGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TCTGCTACTTATGTACCTGCAGGGGCTCACCCTGATTCCCAGGGCATCGAAGGCCTGACCCACGGCGGTTaGAACCCCAGCTGTATCAGT +
Preference number: 4 (lower is better)
Translates to: SATYVPAGAHPDSQGIEGLTHGG*NPSCIS
Trigger: ACTGATACAGCTGGGGTTCCAACCGCCGTGGGTCAG...GCCTTCGATGCCCTGGGAATCAGGGTGAGCCCCTGCAGGTACATAAGTAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGACACAGCTCTTGCAGATaGTGTTGTAGACGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGHSSCR*CCRRGP
Trigger: AGGACCTCGTCTACAACATCATCTGCAAGAGCTGTG...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GCCAGGAAAGGATTAGTAACCAGGCAGCGGGTGGCTCAGAGCTGTGTGCCTGGGCACAGCTCTTGCAGATaGTGTTGTAGACGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: ARKGLVTRQRVAQSCVPGHSSCR*CCRRGP
Trigger: AGGACCTCGTCTACAACATCATCTGCAAGAGCTGTG...CCCAGGCACACAGCTCTGAGCCACCCGCTGCCTGGTTACTAATCCTTTCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGGCTCACCTGATGCATaGTGGACACTGCCGATGGAG +
Preference number: 4 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPGSPDA*WTLPME
Trigger: CTCCATCGGCAGTGTCCATCATGCATCAGGTGAGCC...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp CACAGAGAAAACCAGAGTTGGCTGTGCCTGGGGGTACATGAGCACTCTAAGACCCGACGTCAAAGGAGGTaGAGCCGGCATTGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: HRENQSWLCLGVHEHSKTRRQRR*SRHWRS
Trigger: GCTTCGCCAATGCCGGCTTCACCTCCTTTGACGTCG...GGTCTTAGAGTGCTCATGTACCCCCAGGCACAGCCAACTCTGGTTTTCTCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TTGGTCCCTGCTTCCCTATTGGGACATGATCTATTCCTCACCCTCCAGATCACCGAACTCCTGACCTTGTaGTCTGCCCGCCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: LVPASLLGHDLFLTLQITELLTL*SARLGL
Trigger: GAGGCCGAGGCGGGCAGATCACAAGGTCAGGAGTTC...GGTGATCTGGAGGGTGAGGAATAGATCATGTCCCAATAGGGAAGCAGGGACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR TCA 90 bp TCCCTCAACCTTCCTACCAACCCCCAGTTTGTAGGTGAGAAAACGGAGGCTGAGGGTGGCCAGCCAAAGTaGCCCCAACCCGGAGAATGT +
Preference number: 4 (lower is better)
Translates to: SLNLPTNPQFVGEKTEAEGGQPK*PQPGEC
Trigger: ACATTCTCCGGGTTGGGGTCACTTTGGCTGGCCACC...CTCAGCCTCCGTTTTCTCACCTACAAACTGGGGGTTGGTAGGAAGGTTGAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR TCA 90 bp TCTGCTACTTATGTACCTGCAGGGGCTCACCCTGATTCCCAGGGCATCGAAGGCGTGAGCCGAGGCAGGTaGATGTCAAACCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: SATYVPAGAHPDSQGIEGVSRGR*MSNLHR
Trigger: TCTGTGGAGGTTTGACATTCACCTGCCTCGGCTCAC...GCCTTCGATGCCCTGGGAATCAGGGTGAGCCCCTGCAGGTACATAAGTAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR TCA 90 bp AGGAAGGGCTGCTTAGAAGAGCAACCCTTAGCACCTGGGTCACGTGCATCCCAACGCTTGGTTGTTGAGTaGGGCCTAGAGGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RKGCLEEQPLAPGSRASQRLVVE*GLEEQQ
Trigger: CTGCTGCTCCTCTAGGCCTCACTCAACAACCAAGCG...TTGGGATGCACGTGACCCAGGTGCTAAGGGTTGCTCTTCTAAGCAGCCCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CTAATCCCTTCCTTCCCTTTGCAGCTCAGGCTCCCGGAACAGGTGAGTGACAGATCTCACTCCAGTCTCTaGATGGCCCAGATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LIPSFPLQLRLPEQVSDRSHSSL*MAQMAP
Trigger: TGGGGCCATCTGGGCCATTCAGAGACTGGAGTGAGA...TCTGTCACTCACCTGTTCCGGGAGCCTGAGCTGCAAAGGGAAGGAAGGGATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGGAGCCTGCCACTCCCCGCTaGGCAGCAAGCAAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: CNSATLPGKDVLHPTQKEPATPR*AASKRL
Trigger: CAACCTCTTGCTTGCTGCTCAGCGGGGAGTGGCAGG...CTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTTTGGCTGAGCACCAACAATaGCCCATTCTGGGGGCTTCG +
Preference number: 4 (lower is better)
Translates to: LRVSSTPYFMGPNLRLGLAEHQQ*PILGAS
Trigger: CGAAGCCCCCAGAATGGGTCATTGTTGGTGCTCAGC...CAAACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GGAGACATTGGAAACAGAAAAATCCAAAGCTCATGGCCTTGCTCTGCTCCTTCCCCCGGGTCCCTGCTCTaGGGCCTCTGGTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: GDIGNRKIQSSWPCSAPSPGSLL*GLWSST
Trigger: AGTGCTGGACCAGAGGCCTCAGAGCAGGGACCCGGG...GGAAGGAGCAGAGCAAGGCCATGAGCTTTGGATTTTTCTGTTTCCAATGTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGGCATCCTGCCCCATCTaGTGGCTGAACTGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGASCPI*WLNWCF
Trigger: GAAGCACCAGTTCAGCCATCAGATGGGGCAGGATGC...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CACAGAGAAAACCAGAGTTGGCTGTGCCTGGGGGTACATGAGCACTCTAAGACCCGCCTGGCCAGGTGTTaGGTGAACAGGTCTGGACCA +
Preference number: 4 (lower is better)
Translates to: HRENQSWLCLGVHEHSKTRLARC*VNRSGP
Trigger: TGGTCCAGACCTGTTCACTCAACACCTGGCCAGGCG...GGTCTTAGAGTGCTCATGTACCCCCAGGCACAGCCAACTCTGGTTTTCTCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CAGACGATGGGCTGTGCTGTGCTGGATGTTCACTCTGACCGTGGCGCTTCTAGCAGCTGTATCAGTCCCTaGCCTCCCAACATTGTCAGG +
Preference number: 4 (lower is better)
Translates to: QTMGCAVLDVHSDRGASSSCISP*PPNIVR
Trigger: CCTGACAATGTTGGGAGGTCAGGGACTGATACAGCT...GCTAGAAGCGCCACGGTCAGAGTGAACATCCAGCACAGCACAGCCCATCGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GGAGACATTGGAAACAGAAAAATCCAAAGCTCATGGCCTTGCTCTGCTCCTTCCCGGAGGAGCCAGGTCTaGCCCACGGCGGTTGGAACC +
Preference number: 4 (lower is better)
Translates to: GDIGNRKIQSSWPCSAPSRRSQV*PTAVGT
Trigger: GGTTCCAACCGCCGTGGGTCAGACCTGGCTCCTCCG...GGAAGGAGCAGAGCAAGGCCATGAGCTTTGGATTTTTCTGTTTCCAATGTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GCCAGGAAAGGATTAGTAACCAGGCAGCGGGTGGCTCAGAGCTGTGTGCCTGGGTTGACTCAAACACGTTaGACACCTGGTACGTGCGGA +
Preference number: 4 (lower is better)
Translates to: ARKGLVTRQRVAQSCVPGLTQTR*TPGTCG
Trigger: TCCGCACGTACCAGGTGTGCAACGTGTTTGAGTCAA...CCCAGGCACACAGCTCTGAGCCACCCGCTGCCTGGTTACTAATCCTTTCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp ATGGAGGTTAAGATCACAAGCTGGAGCCAGACTTCTTGGGTTCAAATCCTGGCTCATTGGCGATGCAGCTaGCCCGGGCAGCCACCAGCG +
Preference number: 4 (lower is better)
Translates to: MEVKITSWSQTSWVQILAHWRCS*PGQPPA
Trigger: CGCTGGTGGCTGCCCGGGGCAGCTGCATCGCCAATG...AGCCAGGATTTGAACCCAAGAAGTCTGGCTCCAGCTTGTGATCTTAACCTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR GCA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCAACCTCGGCAGACGGTaGCATTCTCAACGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPNLGRR*HSQRPR
Trigger: TCGAGGCCGTTGAGAATGGCACCGTCTGCCGAGGTT...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp CCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGAACCTCGGCAGACGGTaGCATTCTCAACGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: PSFELHVFLVTSRGWHRLNLGRR*HSQRPR
Trigger: TCGAGGCCGTTGAGAATGGCACCGTCTGCCGAGGTT...CAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp GCAGCTGGTCCCCATTTCCACGGTGCCCTGGCCTGTGTTTACAAGGCAGCTTTCCTCTGTAGTAGCCATTaGGGCAGACACAGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: AAGPHFHGALACVYKAAFLCSSH*GRHSWW
Trigger: CCACCAACTGTGTCTGCCGCAATGGCTACTACAGAG...GAAAGCTGCCTTGTAAACACAGGCCAGGGCACCGTGGAAATGGGGACCAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GTTCCCACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCCAGGGGGTCCAGGTCTaGTCTGTAGTAGCCATTGCG +
Preference number: 4 (lower is better)
Translates to: VPTMTAHLTLRPSSECTLQGVQV*SVVAIA
Trigger: CGCAATGGCTACTACAGAGCAGACCTGGACCCCCTG...GAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGTGGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TGGCCAGCCAAAGTGACCCCAACCCGGAGAATGTCCCTTTGGGAGAGAAGCACGCGATGTAGATCTTCATaGCTGGGGTCATGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: WPAKVTPTRRMSLWERSTRCRSS*LGSCGH
Trigger: GTGGCCACATGACCCCAGGCATGAAGATCTACATCG...CGTGCTTCTCTCCCAAAGGGACATTCTCCGGGTTGGGGTCACTTTGGCTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR GCA 90 bp CAGACGATGGGCTGTGCTGTGCTGGATGTTCACTCTGACCGTGGCGCTTCTAGCCGATGTAGATCTTCATaGCTGGGGTCATGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: QTMGCAVLDVHSDRGASSRCRSS*LGSCGH
Trigger: GTGGCCACATGACCCCAGGCATGAAGATCTACATCG...GCTAGAAGCGCCACGGTCAGAGTGAACATCCAGCACAGCACAGCCCATCGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTCGATGTAGATCTTCATaGCTGGGGTCATGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: VSLSAPSGGQGITVNDPGRCRSS*LGSCGH
Trigger: GTGGCCACATGACCCCAGGCATGAAGATCTACATCG...ACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CACAGAGAAAACCAGAGTTGGCTGTGCCTGGGGGTACATGAGCACTCTAAGACCGCTTCAGGTGGCCACTaGAGACCTCGCCAAACTCCC +
Preference number: 4 (lower is better)
Translates to: HRENQSWLCLGVHEHSKTASGGH*RPRQTP
Trigger: GGGAGTTTGGCGAGGTCTGCAGTGGCCACCTGAAGC...GGTCTTAGAGTGCTCATGTACCCCCAGGCACAGCCAACTCTGGTTTTCTCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTCAAAGATCTCTCTCTTaGCTGGCAGCTTCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: ESSGLHSSGWGRHFRRRSQRSLS*LAASGG
Trigger: GCCACCTGAAGCTGCCAGGCAAGAGAGAGATCTTTG...ACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGGAGCAGGCTGCTACCCTGCGGTCATGACGCACTTTCCCTAGCATCATGTGGTATATGTACCTGGAGCTaGAGACCTGGGGGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: RSRLLPCGHDALSLASCGICTWS*RPGGCP
Trigger: TGGGCAACCCCCAGGTCTGCAGCTCCAGGTACATAT...ACCACATGATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGCAGCCTGCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGGCTGACGGCAGTCACTaGAGTATCAGTCCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGADGSH*SISPRG
Trigger: GCCTCGAGGACTGATACTGCAGTGACTGCCGTCAGC...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TACCAACTGTGTGCAGAGCAGCCGGAAACTCCCCTAACACTGCTGGGCAGGCGGTCCATGTGTTTTCTCTaGCCTGGGCTTTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: YQLCAEQPETPLTLLGRRSMCFL*PGLSGS
Trigger: GCTTCCAGAAAGCCCAGGGCAGAGAAAACACATGGA...CCGCCTGCCCAGCAGTGTTAGGGGAGTTTCCGGCTGCTCTGCACACAGTTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CTCCCGGAACAGGTGAGTGACAGACGATGGGCTGTGCTGTGCTGGATGTTCACTAACCAGAGTTGGCTGTaGCTGGGGGTACATGAGCAC +
Preference number: 4 (lower is better)
Translates to: LPEQVSDRRWAVLCWMFTNQSWL*LGVHEH
Trigger: GTGCTCATGTACCCCCAGGCACAGCCAACTCTGGTT...AGTGAACATCCAGCACAGCACAGCCCATCGTCTGTCACTCACCTGTTCCGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGGAAGGGCTGCTTAGAAGAGCAACCCTTAGCACCTGGGTCACGTGCATCCCAATCCCTTCCTTCCCTTTaGAGCTCAGGCTCCCGGAAC +
Preference number: 4 (lower is better)
Translates to: RKGCLEEQPLAPGSRASQSLPSL*SSGSRN
Trigger: GTTCCGGGAGCCTGAGCTGCAAAGGGAAGGAAGGGA...TTGGGATGCACGTGACCCAGGTGCTAAGGGTTGCTCTTCTAAGCAGCCCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGCCTGGGTCCTTCCTGTaGTTCAGTGAGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGPGSFL*FSEAGG
Trigger: TCCTCCTGCCTCACTGAAGCACAGGAAGGACCCAGG...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGGAAGGGCTGCTTAGAAGAGCAACCCTTAGCACCTGGGTCACGTGCATCCCAACCTGGGTCCTTCCTGTaGTTCAGTGAGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RKGCLEEQPLAPGSRASQPGSFL*FSEAGG
Trigger: TCCTCCTGCCTCACTGAAGCACAGGAAGGACCCAGG...TTGGGATGCACGTGACCCAGGTGCTAAGGGTTGCTCTTCTAAGCAGCCCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CAGACGATGGGCTGTGCTGTGCTGGATGTTCACTCTGACCGTGGCGCTTCTAGCCTCATGGCCTTGCTCTaGTCCTTCCTGGCTGTGTTA +
Preference number: 4 (lower is better)
Translates to: QTMGCAVLDVHSDRGASSLMALL*SFLAVL
Trigger: TAACACAGCCAGGAAGGAGCAGAGCAAGGCCATGAG...GCTAGAAGCGCCACGGTCAGAGTGAACATCCAGCACAGCACAGCCCATCGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TACCAACTGTGTGCAGAGCAGCCGGAAACTCCCCTAACACTGCTGGGCAGGCGGTCCTGCTCAAGAACCTaGTGTGGCTGGACTGTACAT +
Preference number: 4 (lower is better)
Translates to: YQLCAEQPETPLTLLGRRSCSRT*CGWTVH
Trigger: ATGTACAGTCCAGCCACAGCAGGTTCTTGAGCAGGA...CCGCCTGCCCAGCAGTGTTAGGGGAGTTTCCGGCTGCTCTGCACACAGTTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GGCCGCTCCGGGGGCAATTCCTTCTCGGGGAGAGGAGTAGCTGGGAGGCATCCTGTATTCAGCGATTATTaGAATCCCTGTGGTTCCAAC +
Preference number: 4 (lower is better)
Translates to: GRSGGNSFSGRGVAGRHPVFSDY*NPCGSN
Trigger: GTTGGAACCACAGGGATTGCAATAATCGCTGAATAC...AGGATGCCTCCCAGCTACTCCTCTCCCCGAGAAGGAATTGCCCCCGGAGCGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTAGAATTCATGACTCTTaGAGTCTCAGCAGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: ESSGLHSSGWGRHFRRRSRIHDS*SLSRAP
Trigger: GGGGGCCCTGCTGAGACTGCAAGAGTCATGAATTCT...ACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CACAGGCACCTCTGCCGTGTGGCCTCCCAGCTCTGGAAGGCAGTGACTAAGATTAGAATTCATGACTCTTaGAGTCTCAGCAGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: HRHLCRVASQLWKAVTKIRIHDS*SLSRAP
Trigger: GGGGGCCCTGCTGAGACTGCAAGAGTCATGAATTCT...AATCTTAGTCACTGCCTTCCAGAGCTGGGAGGCCACACGGCAGAGGTGCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TACCAACTGTGTGCAGAGCAGCCGGAAACTCCCCTAACACTGCTGGGCAGGCGGAGGGTCTTTGGCCCTTaGCAAGGTGCATCTGTAACT +
Preference number: 4 (lower is better)
Translates to: YQLCAEQPETPLTLLGRRRVFGP*QGASVT
Trigger: AGTTACAGATGCACCTTGGCAAGGGCCAAAGACCCT...CCGCCTGCCCAGCAGTGTTAGGGGAGTTTCCGGCTGCTCTGCACACAGTTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTTTGGTGAGTGAATGTCCCTaGCTGGCCTATGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LRVSSTPYFMGPNLRLGLVSECP*LAYAGP
Trigger: TGGCCCAGCATAGGCCAGGCAGGGACATTCACTCAC...CAAACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AACCTCCTGAGATTAGCCTCCGAGGGGGTGTGCCCGGAGTTGACTCTCTTTCCTAAAAGTTGGGCACGGTaGCTGGCACATTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: NLLRLASEGVCPELTLFPKSWAR*LAHCWH
Trigger: GTGCCAGCAATGTGCCAGGCACCGTGCCCAACTTTT...AGGAAAGAGAGTCAACTCCGGGCACACCCCCTCGGAGGCTAATCTCAGGAGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGGAGCAGGCTGCTACCCTGCGGTCATGACGCACTTTCCCTAGCATCATGTGGTTCAGGAGAAGGAGTGTaGACACTCACTCCCACAGCC +
Preference number: 4 (lower is better)
Translates to: RSRLLPCGHDALSLASCGSGEGV*TLTPTA
Trigger: GGCTGTGGGAGTGAGTGTGCACACTCCTTCTCCTGA...ACCACATGATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGCAGCCTGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGTTGAGAGCTCCGGTCTaGATAGCTCAGGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGLRAPV*IAQAGA
Trigger: TGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAA...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CTAATCCCTTCCTTCCCTTTGCAGCTCAGGCTCCCGGAACAGGTGAGTGACAGAGGTTCTGGGAAACCCTaGCAGACAGCCCCATACCCT +
Preference number: 4 (lower is better)
Translates to: LIPSFPLQLRLPEQVSDRGSGKP*QTAPYP
Trigger: AGGGTATGGGGCTGTCTGGCAGGGTTTCCCAGAACC...TCTGTCACTCACCTGTTCCGGGAGCCTGAGCTGCAAAGGGAAGGAAGGGATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp ATGGAGGTTAAGATCACAAGCTGGAGCCAGACTTCTTGGGTTCAAATCCTGGCTTCCACGTGGATGCGGTaGGCGCCACGGCGCCGGATA +
Preference number: 4 (lower is better)
Translates to: MEVKITSWSQTSWVQILASTWMR*APRRRI
Trigger: TATCCGGCGCCGTGGCGCCCACCGCATCCACGTGGA...AGCCAGGATTTGAACCCAAGAAGTCTGGCTCCAGCTTGTGATCTTAACCTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CCA 90 bp CCATCTCCTCGGATCTGGGAAAGGTCCCGAGAGGTAGTCTCCTTGGCTCCCCTTAGTTGGGGAAGGTCTTaGTGGCCGAGTCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: PSPRIWERSREVVSLAPLSWGRS*WPSQSQ
Trigger: CTGACTTTGACTCGGCCACCAAGACCTTCCCCAACT...AAGGGGAGCCAAGGAGACTACCTCTCGGGACCTTTCCCAGATCCGAGGAGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GGAGAATGTCCCTTTGGGAGAGAAGCACGTGTGTTAGGGAAATATGCGGGTGAACCACCTCTTCCGCATTaGCGATGCAGCTGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: GECPFGREARVLGKYAGEPPLPH*RCSCPG
Trigger: CCCGGGGCAGCTGCATCGCCAATGCGGAAGAGGTGG...TTCACCCGCATATTTCCCTAACACACGTGCTTCTCTCCCAAAGGGACATTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAACCACCTCTTCCGCATTaGCGATGCAGCTGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKPPLPH*RCSCPG
Trigger: CCCGGGGCAGCTGCATCGCCAATGCGGAAGAGGTGG...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGGCAGACACAGTTGGTaGCCCCTTCAGAAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPGRHSW*PLQKWS
Trigger: GGACCACTTCTGAAGGGGCCACCAACTGTGTCTGCC...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GTTCCCACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCTGCGGCAGACACAGTTaGTGGCCCCTTCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: VPTMTAHLTLRPSSECTLCGRHS*WPLQKW
Trigger: CCACTTCTGAAGGGGCCACCAACTGTGTCTGCCGCA...GAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGTGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCTGCGGCAGACACAGTTaGTGGCCCCTTCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPCGRHS*WPLQKW
Trigger: CCACTTCTGAAGGGGCCACCAACTGTGTCTGCCGCA...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp GCACGTGTGTTAGGGAAATATGCGGGTGAAGGGGTCCTGTGCCTGGTAGAGAGCATCTCGAAGGTGTACTaGGTGTGGGCCAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: ARVLGKYAGEGVLCLVESISKVY*VWASRS
Trigger: TGACCTGCTGGCCCACACCCAGTACACCTTCGAGAT...GCTCTCTACCAGGCACAGGACCCCTTCACCCGCATATTTCCCTAACACACGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp GAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTGGGTCATGTGGCCACTaGTGTAGTGTTGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: ESSGLHSSGWGRHFRRRSGSCGH*CSVAAC
Trigger: ACAAGCTGCAACACTACACCAGTGGCCACATGACCC...ACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TCTGCTACTTATGTACCTGCAGGGGCTCACCCTGATTCCCAGGGCATCGAAGGCGATCTCTCTCTTGCCTaGCAGCTTCAGGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: SATYVPAGAHPDSQGIEGDLSLA*QLQVAT
Trigger: AGTGGCCACCTGAAGCTGCCAGGCAAGAGAGAGATC...GCCTTCGATGCCCTGGGAATCAGGGTGAGCCCCTGCAGGTACATAAGTAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGCAATTTGGCCGAACTTaGGCCGGTGGTTGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGQFGRT*AGGCGP
Trigger: AGGACCGCAACCACCGGCCCAAGTTCGGCCAAATTG...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GCACGTGTGTTAGGGAAATATGCGGGTGAAGGGGTCCTGTGCCTGGTAGAGAGCTCTCTCCCCTGCTATTaGGAGGGGGAAGCCAGCTTA +
Preference number: 4 (lower is better)
Translates to: ARVLGKYAGEGVLCLVESSLPCY*EGEASL
Trigger: TAAGCTGGCTTCCCCCTCCCAATAGCAGGGGAGAGA...GCTCTCTACCAGGCACAGGACCCCTTCACCCGCATATTTCCCTAACACACGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp AGAGCTTGTAGGTGGCAGGCAGACCTGGGTATCAGTCCACAGGTGACTCCAAAGCTTGGTGACGTCTCGTaGCTGGCACCGCTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: RACRWQADLGISPQVTPKLGDVS*LAPLGS
Trigger: AGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG...CTTTGGAGTCACCTGTGGACTGATACCCAGGTCTGCCTGCCACCTACAAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp CTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTTTGCTTGGTGACGTCTCGTaGCTGGCACCGCTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: LRVSSTPYFMGPNLRLGLLGDVS*LAPLGS
Trigger: AGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG...CAAACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGCCAGACTTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCGCCTCCGCAGAGCCATaGCTGCGCTTCCCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: SQTSWVQILALVYMTSVTASAEP*LRFPGP
Trigger: AGGCCCCGGGAAGCGCAGCCATGGCTCTGCGGAGGC...GGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAAGTCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CCA 90 bp GCAGCTGGTCCCCATTTCCACGGTGCCCTGGCCTGTGTTTACAAGGCAGCTTTCAGTGTTTCTTGGCTCTaGCCAGGTCACCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: AAGPHFHGALACVYKAAFSVSWL*PGHLPR
Trigger: TCTGGGAAGGTGACCTGGCCAGAGCCAAGAAACACT...GAAAGCTGCCTTGTAAACACAGGCCAGGGCACCGTGGAAATGGGGACCAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGGAGCTGGAGCTGCAGACCTaGGGGTTGCCCATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: CNSATLPGKDVLHPTQKELELQT*GLPILR
Trigger: CCTGAGGATGGGCAACCCCCAGGTCTGCAGCTCCAG...CTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTTTGCGCGTGATATGTACCTaGAGCTGCAGACCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: LRVSSTPYFMGPNLRLGLRVICT*SCRPGG
Trigger: ACCCCCAGGTCTGCAGCTCCAGGTACATATCACGCG...CAAACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GTTCCCACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCTCTGAATGGCCCAGATaGCCCCATGGCAGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: VPTMTAHLTLRPSSECTLSEWPR*PHGSGL
Trigger: AAGCCCACTGCCATGGGGCCATCTGGGCCATTCAGA...GAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGTGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGACTCCAGTCTCTGAATaGCCCAGATGGCCCCATGGC +
Preference number: 4 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGTPVSE*PRWPHG
Trigger: GCCATGGGGCCATCTGGGCCATTCAGAGACTGGAGT...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CACAGAGAAAACCAGAGTTGGCTGTGCCTGGGGGTACATGAGCACTCTAAGACCGCCTCCGATGCAGCCTaGTTTAGGCTCCCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: HRENQSWLCLGVHEHSKTASDAA*FRLPEG
Trigger: TCCCTCTGGGAGCCTAAACCAGGCTGCATCGGAGGC...GGTCTTAGAGTGCTCATGTACCCCCAGGCACAGCCAACTCTGGTTTTCTCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTTTGGCAACCCTTAGCACCTaGGTCACGTGCATCCCAAGG +
Preference number: 4 (lower is better)
Translates to: LRVSSTPYFMGPNLRLGLATLST*VTCIPR
Trigger: CCTTGGGATGCACGTGACCCAGGTGCTAAGGGTTGC...CAAACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TCTGCTACTTATGTACCTGCAGGGGCTCACCCTGATTCCCAGGGCATCGAAGGCGCCAGAAAGGCCACGTaGAGCTGTCGTTCTCCATGT +
Preference number: 4 (lower is better)
Translates to: SATYVPAGAHPDSQGIEGARKAT*SCRSPC
Trigger: ACATGGAGAACGACAGCTCCACGTGGCCTTTCTGGC...GCCTTCGATGCCCTGGGAATCAGGGTGAGCCCCTGCAGGTACATAAGTAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CCATCTCCTCGGATCTGGGAAAGGTCCCGAGAGGTAGTCTCCTTGGCTCCCCTTAGAGTTGGCTGTGCCTaGGGGTACATGAGCACTCTA +
Preference number: 4 (lower is better)
Translates to: PSPRIWERSREVVSLAPLRVGCA*GYMSTL
Trigger: TAGAGTGCTCATGTACCCCCAGGCACAGCCAACTCT...AAGGGGAGCCAAGGAGACTACCTCTCGGGACCTTTCCCAGATCCGAGGAGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGCCCTGAGTCCCTTAAGTGTCTCCTACTGCCCCGCCACCCGGGTCCCTGCTCTTTTGTTACCCTGAAGTaGAGACACAGAGGTCTGGTA +
Preference number: 4 (lower is better)
Translates to: SPESLKCLLLPRHPGPCSFVTLK*RHRGLV
Trigger: TACCAGACCTCTGTGTCTCCACTTCAGGGTAACAAA...AGAGCAGGGACCCGGGTGGCGGGGCAGTAGGAGACACTTAAGGGACTCAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GTTCCCACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCTCAGAGCTGTGTGCCTaGGTGAGCGGGTGGTGTAAG +
Preference number: 4 (lower is better)
Translates to: VPTMTAHLTLRPSSECTLSELCA*VSGWCK
Trigger: CTTACACCACCCGCTCACCCAGGCACACAGCTCTGA...GAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGTGGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTAATCCCTTCCTTCCCTTTGCAGCTCAGGCTCCCGGAACAGGTGAGTGACAGATCAGAGCTGTGTGCCTaGGTGAGCGGGTGGTGTAAG +
Preference number: 4 (lower is better)
Translates to: LIPSFPLQLRLPEQVSDRSELCA*VSGWCK
Trigger: CTTACACCACCCGCTCACCCAGGCACACAGCTCTGA...TCTGTCACTCACCTGTTCCGGGAGCCTGAGCTGCAAAGGGAAGGAAGGGATTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GCAGCTGGTCCCCATTTCCACGGTGCCCTGGCCTGTGTTTACAAGGCAGCTTTCATTTCCACGGTGCCCTaGCCTGTGTTTACAAGGCAG +
Preference number: 4 (lower is better)
Translates to: AAGPHFHGALACVYKAAFISTVP*PVFTRQ
Trigger: CTGCCTTGTAAACACAGGCCAGGGCACCGTGGAAAT...GAAAGCTGCCTTGTAAACACAGGCCAGGGCACCGTGGAAATGGGGACCAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CAGCTGGTGAGATTTCCTTGGTCACAGCAGTGGGGTCCGGAGGAGCCAGGTCTGAACAATGACCCATTCTaGGGGCTTCGTAGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: QLVRFPWSQQWGPEEPGLNNDPF*GLRSSR
Trigger: CCTACTGCTACGAAGCCCCCAGAATGGGTCATTGTT...CAGACCTGGCTCCTCCGGACCCCACTGCTGTGACCAAGGAAATCTCACCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CAGACGATGGGCTGTGCTGTGCTGGATGTTCACTCTGACCGTGGCGCTTCTAGCTGCTCTGCTCCTTCCTaGCTGTGTTACCCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: QTMGCAVLDVHSDRGASSCSAPS*LCYPEQ
Trigger: TTGCTCAGGGTAACACAGCCAGGAAGGAGCAGAGCA...GCTAGAAGCGCCACGGTCAGAGTGAACATCCAGCACAGCACAGCCCATCGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTCCTGGCTGCAGCAACACCCTGTaGTTGTCCAGTGTTAAGACT +
Preference number: 4 (lower is better)
Translates to: LSAPSGGQGITVNDPGPGCSNTL*LSSVKT
Trigger: AGTCTTAACACTGGACAACCACAGGGTGTTGCTGCA...GCCAGGACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGGAGCAGGCTGCTACCCTGCGGTCATGACGCACTTTCCCTAGCATCATGTGGTCAGGAAACAGGGTTCTaGGAAACCCTGCCAGACAGC +
Preference number: 4 (lower is better)
Translates to: RSRLLPCGHDALSLASCGQETGF*ETLPDS
Trigger: GCTGTCTGGCAGGGTTTCCCAGAACCCTGTTTCCTG...ACCACATGATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGCAGCCTGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACCTCCTACAAAGGCATTaGAGTAACAGGGTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: RGMLARVSERTLWRAGYHLLQRH*SNRVRV
Trigger: AACCCTGACCCTGTTACTCCAATGCCTTTGTAGGAG...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAAGACACGCACGGCGATaGGGGACATGCAGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKRHARR*GTCSRH
Trigger: ATGGCGGCTGCATGTCCCTCATCGCCGTGCGTGTCT...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCCTGCCTGGTTGGTGGTaGTGTTCACAGAGGCGAACT +
Preference number: 4 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPLPGWW*CSQRRT
Trigger: AGTTCGCCTCTGTGAACATCACCACCAACCAGGCAG...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp CTAATCCCTTCCTTCCCTTTGCAGCTCAGGCTCCCGGAACAGGTGAGTGACAGACTGCCTGGTTGGTGGTaGTGTTCACAGAGGCGAACT +
Preference number: 4 (lower is better)
Translates to: LIPSFPLQLRLPEQVSDRLPGWW*CSQRRT
Trigger: AGTTCGCCTCTGTGAACATCACCACCAACCAGGCAG...TCTGTCACTCACCTGTTCCGGGAGCCTGAGCTGCAAAGGGAAGGAAGGGATTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TCCCTCAACCTTCCTACCAACCCCCAGTTTGTAGGTGAGAAAACGGAGGCTGAGTGGTGTGCAGTGGCGTaGTCTCAGCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: SLNLPTNPQFVGEKTEAEWCAVA*SQLTAT
Trigger: GGTTGCAGTGAGCTGAGATCACGCCACTGCACACCA...CTCAGCCTCCGTTTTCTCACCTACAAACTGGGGGTTGGTAGGAAGGTTGAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR TCA 90 bp GGCATTGGAGTAACAGGGTCAGGGTTGATCTTGGACACAGCTGGTGAGATTTCCGGTGGCCAGCCAAAGTaGCCCCAACCCGGAGAATGT +
Preference number: 4 (lower is better)
Translates to: GIGVTGSGLILDTAGEISGGQPK*PQPGEC
Trigger: ACATTCTCCGGGTTGGGGTCACTTTGGCTGGCCACC...GGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTGAGCCGAGGCAGGTaGATGTCAAACCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: PSFELHVFLVTSRGWHRLVSRGR*MSNLHR
Trigger: TCTGTGGAGGTTTGACATTCACCTGCCTCGGCTCAC...CAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp GTTCCCACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCTGCATGTTTTCTTGGTaGCGTCTCGTGGCTGGCACC +
Preference number: 4 (lower is better)
Translates to: VPTMTAHLTLRPSSECTLCMFSW*RLVAGT
Trigger: GGTGCCAGCCACGAGACGTCACCAAGAAAACATGCA...GAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGTGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GCCAGGAAAGGATTAGTAACCAGGCAGCGGGTGGCTCAGAGCTGTGTGCCTGGGTGGCGTTGTACTCACTaGGCTCCTTCTCATAGTACT +
Preference number: 4 (lower is better)
Translates to: ARKGLVTRQRVAQSCVPGWRCTH*APSHST
Trigger: AGTACTATGAGAAGGAGCTCAGTGAGTACAACGCCA...CCCAGGCACACAGCTCTGAGCCACCCGCTGCCTGGTTACTAATCCTTTCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CACAGGCACCTCTGCCGTGTGGCCTCCCAGCTCTGGAAGGCAGTGACTAAGATTTGGGGAAAGTTCAGCTaGTGCCATCTGAGTAAGAGG +
Preference number: 4 (lower is better)
Translates to: HRHLCRVASQLWKAVTKIWGKFS*CHLSKR
Trigger: CCTCTTACTCAGATGGCATCAGCTGAACTTTCCCCA...AATCTTAGTCACTGCCTTCCAGAGCTGGGAGGCCACACGGCAGAGGTGCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AGGAGCAGGCTGCTACCCTGCGGTCATGACGCACTTTCCCTAGCATCATGTGGTCAGGGATGGGTTTCCTaGGCAATTTCTCATGCCCAC +
Preference number: 4 (lower is better)
Translates to: RSRLLPCGHDALSLASCGQGWVS*AISHAH
Trigger: GTGGGCATGAGAAATTGCTCAGGAAACCCATCCCTG...ACCACATGATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGCAGCCTGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GGAAACAGGGTTCTGGGAAACCCTGCCAGACAGCCCCATACCCTGGTTGAGAGCCGATGGCAAACATTTTaGGAAATCCCAGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GNRVLGNPARQPHTLVESRWQTF*EIPGGG
Trigger: CCCACCTCCTGGGATTTCTCAAAATGTTTGCCATCG...GCTCTCAACCAGGGTATGGGGCTGTCTGGCAGGGTTTCCCAGAACCCTGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AGGAGCAGGCTGCTACCCTGCGGTCATGACGCACTTTCCCTAGCATCATGTGGTGGGGGAAGAGTCAAGTaGGGATTTCCATGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: RSRLLPCGHDALSLASCGGGRVK*GFPCLE
Trigger: CTCCAGACATGGAAATCCTCACTTGACTCTTCCCCC...ACCACATGATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGCAGCCTGCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CTAATCCCTTCCTTCCCTTTGCAGCTCAGGCTCCCGGAACAGGTGAGTGACAGAAAGGCTGGTTGTGAGTaGATGTCCCTGCCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: LIPSFPLQLRLPEQVSDRKAGCE*MSLPGL
Trigger: TAGGCCAGGCAGGGACATTCACTCACAACCAGCCTT...TCTGTCACTCACCTGTTCCGGGAGCCTGAGCTGCAAAGGGAAGGAAGGGATTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AGGAGCAGGCTGCTACCCTGCGGTCATGACGCACTTTCCCTAGCATCATGTGGTAGCTGTATCAGTCCCTaGCCTCCCAACATTGTCAGG +
Preference number: 4 (lower is better)
Translates to: RSRLLPCGHDALSLASCGSCISP*PPNIVR
Trigger: CCTGACAATGTTGGGAGGTCAGGGACTGATACAGCT...ACCACATGATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGCAGCCTGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGGGAGTTGGAGAGAAACTGCTTTTGTCTCCGATTGGACACATCGCATGAATCTTCATCTCCACGTGGATaGGGTGGGCGCCACGGCGCC +
Preference number: 4 (lower is better)
Translates to: RELERNCFCLRLDTSHESSSPRG*GGRHGA
Trigger: GGCGCCGTGGCGCCCACCGCATCCACGTGGAGATGA...AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
CDS-3UTR GCA 90 bp GACTTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGTCATCTCCACGTGGATaGGGTGGGCGCCACGGCGCC +
Preference number: 4 (lower is better)
Translates to: DFLGSNPGSSIYDLCDLGSSPRG*GGRHGA
Trigger: GGCGCCGTGGCGCCCACCGCATCCACGTGGAGATGA...CCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR GCA 90 bp TGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGGAGGCACGCTGGGGATGCTaGTGCAGTCACGCACCGAAA +
Preference number: 4 (lower is better)
Translates to: CNSATLPGKDVLHPTQKEARWGC*CSHAPK
Trigger: TTTCGGTGCGTGACTGCAGCAGCATCCCCAGCGTGC...CTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TTTTTCTTAATCCCTGTCTACAGCAGACCCTCTCTCTGCAGACATCAGGGCAGTCAGGCACGCTGGGGATaGTGCTGCAGTCACGCACCG +
Preference number: 4 (lower is better)
Translates to: FFLIPVYSRPSLCRHQGSQARWG*CCSHAP
Trigger: CGGTGCGTGACTGCAGCAGCATCCCCAGCGTGCCTG...ACTGCCCTGATGTCTGCAGAGAGAGGGTCTGCTGTAGACAGGGATTAAGAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GGAGACATTGGAAACAGAAAAATCCAAAGCTCATGGCCTTGCTCTGCTCCTTCCCAGGCACGCTGGGGATaGTGCTGCAGTCACGCACCG +
Preference number: 4 (lower is better)
Translates to: GDIGNRKIQSSWPCSAPSQARWG*CCSHAP
Trigger: CGGTGCGTGACTGCAGCAGCATCCCCAGCGTGCCTG...GGAAGGAGCAGAGCAAGGCCATGAGCTTTGGATTTTTCTGTTTCCAATGTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CTCTGCAGACATCAGGGCAGTTTGTTATGGGGGAAGAGTCAAGTGAGGATTTCCCCAGGTAGAAGCCGCTaGGGGACACAGGTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: LCRHQGSLLWGKSQVRISPGRSR*GTQVRS
Trigger: GCTTCGGACCTGTGTCCCGCAGCGGCTTCTACCTGG...GGAAATCCTCACTTGACTCTTCCCCCATAACAAACTGCCCTGATGTCTGCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TTCTCCACCTTAAGTTTGATGGCAGAAGCCATTTTGCAGAAGGCTGGGTCAAGGCAGCCACCAGCGATGTaGTCTCAGCCCCCGACAGGG +
Preference number: 4 (lower is better)
Translates to: FSTLSLMAEAILQKAGSRQPPAM*SQPPTG
Trigger: CCCTGTCGGGGGCTGAGAGCACATCGCTGGTGGCTG...CCTTGACCCAGCCTTCTGCAAAATGGCTTCTGCCATCAAACTTAAGGTGGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp ATGGAGGTTAAGATCACAAGCTGGAGCCAGACTTCTTGGGTTCAAATCCTGGCTCAGCCACCAGCGATGTaGTCTCAGCCCCCGACAGGG +
Preference number: 4 (lower is better)
Translates to: MEVKITSWSQTSWVQILAQPPAM*SQPPTG
Trigger: CCCTGTCGGGGGCTGAGAGCACATCGCTGGTGGCTG...AGCCAGGATTTGAACCCAAGAAGTCTGGCTCCAGCTTGTGATCTTAACCTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR GCA 90 bp CTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTTTGCACTGCCGATGGAGCTaGCTGGTTGGTGGTGATGTT +
Preference number: 4 (lower is better)
Translates to: LRVSSTPYFMGPNLRLGLHCRWS*LVGGDV
Trigger: AACATCACCACCAACCAGGCAGCTCCATCGGCAGTG...CAAACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAACGTAACCTGCCACGGTaGGTGCCCGCACCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKRNLPR*VPAPGR
Trigger: TCTTCCAGGTGCGGGCACGCACCGTGGCAGGTTACG...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GGAGAATGTCCCTTTGGGAGAGAAGCACGTGTGTTAGGGAAATATGCGGGTGAAGGGCCTTCTCTCCCCTaGTATTGGGAGGGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GECPFGREARVLGKYAGEGPSLP*YWEGEA
Trigger: GGCTTCCCCCTCCCAATAGCAGGGGAGAGAAGGCCC...TTCACCCGCATATTTCCCTAACACACGTGCTTCTCTCCCAAAGGGACATTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR GCA 90 bp CTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTCCTGGCCTCTCGTCAATTCTCTaGTACTTATGTACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LSAPSGGQGITVNDPGPGLSSIL*YLCTCR
Trigger: CCTGCAGGTACATAAGTAGCAGAGAATTGACGAGAG...GCCAGGACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CTAATCCCTTCCTTCCCTTTGCAGCTCAGGCTCCCGGAACAGGTGAGTGACAGATGGGAAACCTGCCAATaGTTTCCCTGTGGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: LIPSFPLQLRLPEQVSDRWETCQ*FPCGLP
Trigger: GGGCAAGCCACAGGGAAAGCATTGGCAGGTTTCCCA...TCTGTCACTCACCTGTTCCGGGAGCCTGAGCTGCAAAGGGAAGGAAGGGATTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp ACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCGTCAATGAAGGTGACCTTGTGTaGCGAGACAGCTGCCACCCG +
Preference number: 4 (lower is better)
Translates to: TMTAHLTLRPSSECTLVNEGDLV*RDSCHP
Trigger: CGGGTGGCAGCTGTCTCGGCACACAAGGTCACCTTC...ATTGACGAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GCAGCTGGTCCCCATTTCCACGGTGCCCTGGCCTGTGTTTACAAGGCAGCTTTCTCCTGCTCAAGAACCTaGTGTGGCTGGACTGTACAT +
Preference number: 4 (lower is better)
Translates to: AAGPHFHGALACVYKAAFSCSRT*CGWTVH
Trigger: ATGTACAGTCCAGCCACAGCAGGTTCTTGAGCAGGA...GAAAGCTGCCTTGTAAACACAGGCCAGGGCACCGTGGAAATGGGGACCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TGGCCCTGCAGCTTCCTTGCTGCAGGGAGGGAAATTCCACCCCAGATGAGTCCCGGAAAAACTGGCAGCTaGAAGACCATTCTCCACCTT +
Preference number: 4 (lower is better)
Translates to: WPCSFLAAGREIPPQMSPGKTGS*KTILHL
Trigger: AAGGTGGAGAATGGTCTTGCAGCTGCCAGTTTTTCC...GGGACTCATCTGGGGTGGAATTTCCCTCCCTGCAGCAAGGAAGCTGCAGGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CACAGGCACCTCTGCCGTGTGGCCTCCCAGCTCTGGAAGGCAGTGACTAAGATTTGGCCCTTGCCAAGGTaGATCTGTAACTCAGATCCA +
Preference number: 4 (lower is better)
Translates to: HRHLCRVASQLWKAVTKIWPLPR*ICNSDP
Trigger: TGGATCTGAGTTACAGATGCACCTTGGCAAGGGCCA...AATCTTAGTCACTGCCTTCCAGAGCTGGGAGGCCACACGGCAGAGGTGCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GCACTCAGGCCATCATCTATTCTGATTGGTCTGCCCGAGTCTTCGCAGTTGATAGAGCCAGTGGGGCCCTaGTTGGTTCCTAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: ALRPSSILIGLPESSQLIEPVGP*LVPRST
Trigger: GGTGGACCTAGGAACCAAGCAGGGCCCCACTGGCTC...TATCAACTGCGAAGACTCGGGCAGACCAATCAGAATAGATGATGGCCTGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGTGGGGAAGGTCTTGGTaGCCGAGTCAAAGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PSFELHVFLVTSRGWHRLWGRSW*PSQSQP
Trigger: AGGCTGACTTTGACTCGGCCACCAAGACCTTCCCCA...CAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp CCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGATTCTCCATCCAGTTaGGGAAGGTCTTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: PSFELHVFLVTSRGWHRLDSPSS*GRSWWP
Trigger: CGGCCACCAAGACCTTCCCCAACTGGATGGAGAATC...CAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp TCTGCTACTTATGTACCTGCAGGGGCTCACCCTGATTCCCAGGGCATCGAAGGCTCTCGTCGGCTGCAATaGTATCCACCTTCACCCATG +
Preference number: 4 (lower is better)
Translates to: SATYVPAGAHPDSQGIEGSRRLQ*YPPSPM
Trigger: CATGGGTGAAGGTGGATACCATTGCAGCCGACGAGA...GCCTTCGATGCCCTGGGAATCAGGGTGAGCCCCTGCAGGTACATAAGTAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GGAGACATTGGAAACAGAAAAATCCAAAGCTCATGGCCTTGCTCTGCTCCTTCCCCACCTCTTCCGCATTaGCGATGCAGCTGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: GDIGNRKIQSSWPCSAPSPPLPH*RCSCPG
Trigger: CCCGGGGCAGCTGCATCGCCAATGCGGAAGAGGTGG...GGAAGGAGCAGAGCAAGGCCATGAGCTTTGGATTTTTCTGTTTCCAATGTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTTTGCTGTTGATGGGACAGTaGGTACAGGCCTCATCCCCT +
Preference number: 4 (lower is better)
Translates to: LRVSSTPYFMGPNLRLGLLLMGQ*VQASSP
Trigger: AGGGGATGAGGCCTGTACCCACTGTCCCATCAACAG...CAAACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TCCCTCAACCTTCCTACCAACCCCCAGTTTGTAGGTGAGAAAACGGAGGCTGAGTGCGGCAGACACAGTTaGTGGCCCCTTCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: SLNLPTNPQFVGEKTEAECGRHS*WPLQKW
Trigger: CCACTTCTGAAGGGGCCACCAACTGTGTCTGCCGCA...CTCAGCCTCCGTTTTCTCACCTACAAACTGGGGGTTGGTAGGAAGGTTGAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCAAGGTGTACTGGGTGTaGGCCAGCAGGTCACTGATG +
Preference number: 4 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPKVYWV*ASRSLM
Trigger: CATCAGTGACCTGCTGGCCCACACCCAGTACACCTT...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp CCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGAAGGTGTACTGGGTGTaGGCCAGCAGGTCACTGATG +
Preference number: 4 (lower is better)
Translates to: PSFELHVFLVTSRGWHRLKVYWV*ASRSLM
Trigger: CATCAGTGACCTGCTGGCCCACACCCAGTACACCTT...CAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp AGGAAGGGCTGCTTAGAAGAGCAACCCTTAGCACCTGGGTCACGTGCATCCCAAACGCCGTTCACAGCCTaGATCTCGAAGGTGTACTGG +
Preference number: 4 (lower is better)
Translates to: RKGCLEEQPLAPGSRASQTPFTA*ISKVYW
Trigger: CCAGTACACCTTCGAGATCCAGGCTGTGAACGGCGT...TTGGGATGCACGTGACCCAGGTGCTAAGGGTTGCTCTTCTAAGCAGCCCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGGCACCTGGCTCTGGAGTTTGCAGCAACACCCTGTGGTTGTCCAGTGTTAAGAGGCGAGAAGGGGCTCTaGTCAGTAACGCCGTTCACA +
Preference number: 4 (lower is better)
Translates to: RHLALEFAATPCGCPVLRGEKGL*SVTPFT
Trigger: TGTGAACGGCGTTACTGACCAGAGCCCCTTCTCGCC...TCTTAACACTGGACAACCACAGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GGAGAATGTCCCTTTGGGAGAGAAGCACGTGTGTTAGGGAAATATGCGGGTGAAATCACGCCATTGGGCTaGTCCGGCTGGGACCACGAC +
Preference number: 4 (lower is better)
Translates to: GECPFGREARVLGKYAGEITPLG*SGWDHD
Trigger: GTCGTGGTCCCAGCCGGACCAGCCCAATGGCGTGAT...TTCACCCGCATATTTCCCTAACACACGTGCTTCTCTCCCAAAGGGACATTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp GAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTTGGTGGGGCTTTTTATaGCTGTGGCGTTGTACTCAC +
Preference number: 4 (lower is better)
Translates to: ESSGLHSSGWGRHFRRRSWWGFL*LWRCTH
Trigger: GTGAGTACAACGCCACAGCCATAAAAAGCCCCACCA...ACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TGGCCCTGCAGCTTCCTTGCTGCAGGGAGGGAAATTCCACCCCAGATGAGTCCCACTCGGCTTCTGTCATaGTCTGGAAGTACATCTTGC +
Preference number: 4 (lower is better)
Translates to: WPCSFLAAGREIPPQMSPTRLLS*SGSTSC
Trigger: GCAAGATGTACTTCCAGACCATGACAGAAGCCGAGT...GGGACTCATCTGGGGTGGAATTTCCCTCCCTGCAGCAAGGAAGCTGCAGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GGAAACAGGGTTCTGGGAAACCCTGCCAGACAGCCCCATACCCTGGTTGAGAGCAGTGGCAACTTCTCCTaGATGCTTGTCTGGTACTCG +
Preference number: 4 (lower is better)
Translates to: GNRVLGNPARQPHTLVESSGNFS*MLVWYS
Trigger: CGAGTACCAGACAAGCATCCAGGAGAAGTTGCCACT...GCTCTCAACCAGGGTATGGGGCTGTCTGGCAGGGTTTCCCAGAACCCTGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GCACGTGTGTTAGGGAAATATGCGGGTGAAGGGGTCCTGTGCCTGGTAGAGAGCGTAGATCTTCATGCCTaGGGTCATGTGGCCACTGGT +
Preference number: 4 (lower is better)
Translates to: ARVLGKYAGEGVLCLVESVDLHA*GHVATG
Trigger: ACCAGTGGCCACATGACCCCAGGCATGAAGATCTAC...GCTCTCTACCAGGCACAGGACCCCTTCACCCGCATATTTCCCTAACACACGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp TCTGCTACTTATGTACCTGCAGGGGCTCACCCTGATTCCCAGGGCATCGAAGGCGTAGATCTTCATGCCTaGGGTCATGTGGCCACTGGT +
Preference number: 4 (lower is better)
Translates to: SATYVPAGAHPDSQGIEGVDLHA*GHVATG
Trigger: ACCAGTGGCCACATGACCCCAGGCATGAAGATCTAC...GCCTTCGATGCCCTGGGAATCAGGGTGAGCCCCTGCAGGTACATAAGTAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGATCTCTCTCTTGCCTaGCAGCTTCAGGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: PSFELHVFLVTSRGWHRLDLSLA*QLQVAT
Trigger: AGTGGCCACCTGAAGCTGCCAGGCAAGAGAGAGATC...CAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTGATCTCTCTCTTGCCTaGCAGCTTCAGGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGDLSLA*QLQVAT
Trigger: AGTGGCCACCTGAAGCTGCCAGGCAAGAGAGAGATC...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GGAGAATGTCCCTTTGGGAGAGAAGCACGTGTGTTAGGGAAATATGCGGGTGAACAGTCCAGCATGAGTTaGTGCAGGGCGCTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: GECPFGREARVLGKYAGEQSSMS*CRALGQ
Trigger: CTGCCCGAGCGCCCTGCACCAACTCATGCTGGACTG...TTCACCCGCATATTTCCCTAACACACGTGCTTCTCTCCCAAAGGGACATTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp CCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGAGCGTGTTGACAATTTaGCCGAACTTGGGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: PSFELHVFLVTSRGWHRLSVLTI*PNLGRW
Trigger: CCACCGGCCCAAGTTCGGCCAAATTGTCAACACGCT...CAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp CTAATCCCTTCCTTCCCTTTGCAGCTCAGGCTCCCGGAACAGGTGAGTGACAGAAGCGTGTTGACAATTTaGCCGAACTTGGGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: LIPSFPLQLRLPEQVSDRSVLTI*PNLGRW
Trigger: CCACCGGCCCAAGTTCGGCCAAATTGTCAACACGCT...TCTGTCACTCACCTGTTCCGGGAGCCTGAGCTGCAAAGGGAAGGAAGGGATTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGTGGAGGGAGCGACTATaGTGTGAGGTGGAAGAGCAC +
Preference number: 4 (lower is better)
Translates to: PSFELHVFLVTSRGWHRLWRERL*CEVEEH
Trigger: GTGCTCTTCCACCTCACACCATAGTCGCTCCCTCCA...CAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp TCCTTCCTCATGGGACTAAGGTGTATAAGTGTTTTGCACAGCCTGCCTCACCCACGTGGCGCTTCTAGCTaGCTGCCTGTGGCCCGAATC +
Preference number: 4 (lower is better)
Translates to: SFLMGLRCISVLHSLPHPRGASS*LPVARI
Trigger: GATTCGGGCCACAGGCAGCCAGCTAGAAGCGCCACG...TGGGTGAGGCAGGCTGTGCAAAACACTTATACACCTTAGTCCCATGAGGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTCTGCAGACATCAGGGCAGTTTGTTATGGGGGAAGAGTCAAGTGAGGATTTCCCGTGGCGCTTCTAGCTaGCTGCCTGTGGCCCGAATC +
Preference number: 4 (lower is better)
Translates to: LCRHQGSLLWGKSQVRISRGASS*LPVARI
Trigger: GATTCGGGCCACAGGCAGCCAGCTAGAAGCGCCACG...GGAAATCCTCACTTGACTCTTCCCCCATAACAAACTGCCCTGATGTCTGCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AACCTCCTGAGATTAGCCTCCGAGGGGGTGTGCCCGGAGTTGACTCTCTTTCCTCTGCCGGCCAGTTTGTaGGAAACCTGCCAATGCTTT +
Preference number: 4 (lower is better)
Translates to: NLLRLASEGVCPELTLFPLPASL*ETCQCF
Trigger: AAAGCATTGGCAGGTTTCCCACAAACTGGCCGGCAG...AGGAAAGAGAGTCAACTCCGGGCACACCCCCTCGGAGGCTAATCTCAGGAGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAACTGCCAGCCCCATGTaGGGCCCCAGAACAGTTGGG +
Preference number: 4 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKTASPM*GPRTVG
Trigger: CCCAACTGTTCTGGGGCCCCACATGGGGCTGGCAGT...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACTACAGACAGATGGCCTaGTTGGAATCTTCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: RGMLARVSERTLWRAGYHYRQMA*LESSGN
Trigger: ATTCCCAGAAGATTCCAACCAGGCCATCTGTCTGTA...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CAGACGATGGGCTGTGCTGTGCTGGATGTTCACTCTGACCGTGGCGCTTCTAGCTTGAGTGAACAGGTCTaGACCATAGCCTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: QTMGCAVLDVHSDRGASSLSEQV*TIALGS
Trigger: AGACCCCAAGGCTATGGTCCAGACCTGTTCACTCAA...GCTAGAAGCGCCACGGTCAGAGTGAACATCCAGCACAGCACAGCCCATCGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGGAATCTTAGAAACATaGAATCATTCCATTGGAATC +
Preference number: 4 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGGILET*NHSIGI
Trigger: GATTCCAATGGAATGATTCCATGTTTCTAAGATTCC...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CCA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGCCCAAGGCAAATTCCTaGCCCTGCAGCTTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGPKANS*PCSFLA
Trigger: AGCAAGGAAGCTGCAGGGCCAGGAATTTGCCTTGGG...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGGAAGGCACCTGGCTCTaGAGTTTGCAGCAACACCCT +
Preference number: 4 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGEGTWL*SLQQHP
Trigger: AGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCTTC...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCTCAGAGGCCACTTACTaGCTGTGTGACCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPSEATY*LCDLGE
Trigger: CTCTCCCAGGTCACACAGCCAGTAAGTGGCCTCTGA...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CCA 90 bp CAGCTGGTGAGATTTCCTTGGTCACAGCAGTGGGGTCCGGAGGAGCCAGGTCTGCTCCTACAAAGGCATTaGAGTAACAGGGTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: QLVRFPWSQQWGPEEPGLLLQRH*SNRVRV
Trigger: AACCCTGACCCTGTTACTCCAATGCCTTTGTAGGAG...CAGACCTGGCTCCTCCGGACCCCACTGCTGTGACCAAGGAAATCTCACCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CAA 72 bp GCAGACCTGGGTATCAGTCCACAGGTGACTCCAAAGTaGGCCATCTTGCCCCTTGGTCCCTGCTTCCCTATT +
Preference number: 4 (lower is better)
Translates to: ADLGISPQVTPK*AILPLGPCFPI
Trigger: AATAGGGAAGCAGGGACCAAGGGGCAAGATGGCCAACTTTGGAGTCACCTGTGGACTGATACCCAGGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
3UTR CAA 72 bp GCCACTTCCAACTCACTTCCTTTGTTGCCTGTGCTTTaGACAAGCCAGGGCCAGAAAGGCCACGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ATSNSLPLLPVL*TSQGQKGHVEL
Trigger: CAGCTCCACGTGGCCTTTCTGGCCCTGGCTTGTCAAAAGCACAGGCAACAAAGGAAGTGAGTTGGAAGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp ACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCGTCAATCACCTCTTCCCACCCTaGTGGAGGATGCACCATCCA +
Preference number: 4 (lower is better)
Translates to: TMTAHLTLRPSSECTLVNHLFPP*WRMHHP
Trigger: TGGATGGTGCATCCTCCATCAGGGTGGGAAGAGGTG...ATTGACGAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CTCCCGGAACAGGTGAGTGACAGACGATGGGCTGTGCTGTGCTGGATGTTCACTCCAGTTGTTCTGGCTTaGCTCAAACACGTTGCACAC +
Preference number: 4 (lower is better)
Translates to: LPEQVSDRRWAVLCWMFTPVVLA*LKHVAH
Trigger: GTGTGCAACGTGTTTGAGTCAAGCCAGAACAACTGG...AGTGAACATCCAGCACAGCACAGCCCATCGTCTGTCACTCACCTGTTCCGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CACAGAGAAAACCAGAGTTGGCTGTGCCTGGGGGTACATGAGCACTCTAAGACCCCCCTTGGTTGGCCTTaGAAGTCCCAGATGGACAAC +
Preference number: 4 (lower is better)
Translates to: HRENQSWLCLGVHEHSKTPLGWP*KSQMDN
Trigger: GTTGTCCATCTGGGACTTTCAAGGCCAACCAAGGGG...GGTCTTAGAGTGCTCATGTACCCCCAGGCACAGCCAACTCTGGTTTTCTCTGTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AAAGTGACCCCAACCCGGAGAATGTCCCTTTGGGAGAGAAGCACGTGTGTTAGGGTGAGCCGAGGCAGGTaGATGTCAAACCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: KVTPTRRMSLWERSTCVRVSRGR*MSNLHR
Trigger: TCTGTGGAGGTTTGACATTCACCTGCCTCGGCTCAC...CCTAACACACGTGCTTCTCTCCCAAAGGGACATTCTCCGGGTTGGGGTCACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR TCA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAATTGGACACATCGCATaGATCTCCCAAGCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGIGHIA*ISQALF
Trigger: AAAAAGGGCTTGGGAGATTCATGCGATGTGTCCAAT...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TTTTTCTTAATCCCTGTCTACAGCAGACCCTCTCTCTGCAGACATCAGGGCAGTCATCCTCAGGAAGGCTaGCCTTTCTGGGGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: FFLIPVYSRPSLCRHQGSHPQEG*PFWGPR
Trigger: GCGGGGACCCCAGAAAGGTCAGCCTTCCTGAGGATG...ACTGCCCTGATGTCTGCAGAGAGAGGGTCTGCTGTAGACAGGGATTAAGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GGCATTGGAGTAACAGGGTCAGGGTTGATCTTGGACACAGCTGGTGAGATTTCCTCTCACTCCAGTCTCTaGATGGCCCAGATGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GIGVTGSGLILDTAGEISSHSSL*MAQMAP
Trigger: TGGGGCCATCTGGGCCATTCAGAGACTGGAGTGAGA...GGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGGGGAAAACTGGGTTTTaGCCATCTGAGGGCACTCAG +
Preference number: 4 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGGKTGF*PSEGTQ
Trigger: CTGAGTGCCCTCAGATGGTCAAAACCCAGTTTTCCC...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTATTCTGATTTTAATGTaGGCAAGAGCTCATTTGCAC +
Preference number: 4 (lower is better)
Translates to: LGDVSWLAPLGSSRGPWPILILM*ARAHLH
Trigger: GTGCAAATGAGCTCTTGCTCACATTAAAATCAGAAT...AGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR TCA 90 bp GTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTATCTGTTTGTTACCCTaGAGTGGAGACACAGAGGTC +
Preference number: 4 (lower is better)
Translates to: VSLSAPSGGQGITVNDPGICLLP*SGDTEV
Trigger: GACCTCTGTGTCTCCACTTCAGGGTAACAAACAGAT...ACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CCATCTCCTCGGATCTGGGAAAGGTCCCGAGAGGTAGTCTCCTTGGCTCCCCTTATCTGTTTGTTACCCTaGAGTGGAGACACAGAGGTC +
Preference number: 4 (lower is better)
Translates to: PSPRIWERSREVVSLAPLICLLP*SGDTEV
Trigger: GACCTCTGTGTCTCCACTTCAGGGTAACAAACAGAT...AAGGGGAGCCAAGGAGACTACCTCTCGGGACCTTTCCCAGATCCGAGGAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TTCTCCACCTTAAGTTTGATGGCAGAAGCCATTTTGCAGAAGGCTGGGTCAAGGCCTGCCACTCCCCGCTaGGCAGCAAGCAAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: FSTLSLMAEAILQKAGSRPATPR*AASKRL
Trigger: CAACCTCTTGCTTGCTGCTCAGCGGGGAGTGGCAGG...CCTTGACCCAGCCTTCTGCAAAATGGCTTCTGCCATCAAACTTAAGGTGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AGGCACCTGGCTCTGGAGTTTGCAGCAACACCCTGTGGTTGTCCAGTGTTAAGAGAGGGAGAGGACTGCTaGGCACCAACAATGACCCAT +
Preference number: 4 (lower is better)
Translates to: RHLALEFAATPCGCPVLREGEDC*APTMTH
Trigger: ATGGGTCATTGTTGGTGCTCAGCAGTCCTCTCCCTC...TCTTAACACTGGACAACCACAGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGGAGTTGGAGATGAGCCCCTaGTGGGAGAGGAGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: CNSATLPGKDVLHPTQKELEMSP*WERSVR
Trigger: CCTCACACTCCTCTCCCATCAGGGGCTCATCTCCAA...CTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGGAGTTCTCCTGGAATAAATaGGGGCCGCTCCGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: CNSATLPGKDVLHPTQKEFSWNK*GPLRGQ
Trigger: TTGCCCCCGGAGCGGCCCTCATTTATTCCAGGAGAA...CTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CTAATCCCTTCCTTCCCTTTGCAGCTCAGGCTCCCGGAACAGGTGAGTGACAGAGGGGGAAGAGTCAAGTaGGGATTTCCATGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LIPSFPLQLRLPEQVSDRGGRVK*GFPCLE
Trigger: CTCCAGACATGGAAATCCTCACTTGACTCTTCCCCC...TCTGTCACTCACCTGTTCCGGGAGCCTGAGCTGCAAAGGGAAGGAAGGGATTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GCAGCTGGTCCCCATTTCCACGGTGCCCTGGCCTGTGTTTACAAGGCAGCTTTCTTAAGACTCTGGCTCTaGATAGGAAGGGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: AAGPHFHGALACVYKAAFLRLWL*IGRGSA
Trigger: AGCAGAACCCCTTCCTATTCAGAGCCAGAGTCTTAA...GAAAGCTGCCTTGTAAACACAGGCCAGGGCACCGTGGAAATGGGGACCAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp ACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCGTCAATCACTTACTGGCTGTGTaGCCTGGGAGAGCCACCATG +
Preference number: 4 (lower is better)
Translates to: TMTAHLTLRPSSECTLVNHLLAV*PGRATM
Trigger: CATGGTGGCTCTCCCAGGTCACACAGCCAGTAAGTG...ATTGACGAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GGCATTGGAGTAACAGGGTCAGGGTTGATCTTGGACACAGCTGGTGAGATTTCCACAGTGGAGAGGGGCTaGGTGTGTACCACTGGTAGC +
Preference number: 4 (lower is better)
Translates to: GIGVTGSGLILDTAGEISTVERG*VCTTGS
Trigger: GCTACCAGTGGTACACACTCAGCCCCTCTCCACTGT...GGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGCGGGGATCTGGGATTTaGCTGGCAAAGGATCTGACA +
Preference number: 4 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGRGSGI*LAKDLT
Trigger: TGTCAGATCCTTTGCCAGTCAAATCCCAGATCCCCG...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TCCTTCCTCATGGGACTAAGGTGTATAAGTGTTTTGCACAGCCTGCCTCACCCAGCACGCTGGGGATGCTaGTGCAGTCACGCACCGAAA +
Preference number: 4 (lower is better)
Translates to: SFLMGLRCISVLHSLPHPARWGC*CSHAPK
Trigger: TTTCGGTGCGTGACTGCAGCAGCATCCCCAGCGTGC...TGGGTGAGGCAGGCTGTGCAAAACACTTATACACCTTAGTCCCATGAGGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGCTTGCATTTTCTAAGCACCCGCTTCCTTTATATCTCCCTCAACCTTCCTACCCAGGCACGCTGGGGATaGTGCTGCAGTCACGCACCG +
Preference number: 4 (lower is better)
Translates to: SLHFLSTRFLYISLNLPTQARWG*CCSHAP
Trigger: CGGTGCGTGACTGCAGCAGCATCCCCAGCGTGCCTG...GGTAGGAAGGTTGAGGGAGATATAAAGGAAGCGGGTGCTTAGAAAATGCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR GCA 90 bp GAGCCAGACTTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCAGGCACGCTGGGGATaGTGCTGCAGTCACGCACCG +
Preference number: 4 (lower is better)
Translates to: EPDFLGSNPGSSIYDLCDQARWG*CCSHAP
Trigger: CGGTGCGTGACTGCAGCAGCATCCCCAGCGTGCCTG...GTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAAGTCTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR GCA 90 bp AGGGAGTTGGAGAGAAACTGCTTTTGTCTCCGATTGGACACATCGCATGAATCTCTTCCGCATTGGCGATaGAGCTGCCCCGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: RELERNCFCLRLDTSHESLPHWR*SCPGQP
Trigger: TGGCTGCCCGGGGCAGCTGCATCGCCAATGCGGAAG...AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
CDS-3UTR GCA 90 bp GACTTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCTTCCGCATTGGCGATaGAGCTGCCCCGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: DFLGSNPGSSIYDLCDLGLPHWR*SCPGQP
Trigger: TGGCTGCCCGGGGCAGCTGCATCGCCAATGCGGAAG...CCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR GCA 90 bp TTTTTCTTAATCCCTGTCTACAGCAGACCCTCTCTCTGCAGACATCAGGGCAGTCGGAGGGGATGGTTGTaGAGGGCATGTCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: FFLIPVYSRPSLCRHQGSRRGWL*RACPGG
Trigger: ACCCCCTGGACATGCCCTGCACAACCATCCCCTCCG...ACTGCCCTGATGTCTGCAGAGAGAGGGTCTGCTGTAGACAGGGATTAAGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGCTTGCATTTTCTAAGCACCCGCTTCCTTTATATCTCCCTCAACCTTCCTACCTGCCTGGTAGAGAGCTaGCTGGGCTTCCCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: SLHFLSTRFLYISLNLPTCLVES*LGFPGR
Trigger: CCTCCCGGGGAAGCCCAGGCAGCTCTCTACCAGGCA...GGTAGGAAGGTTGAGGGAGATATAAAGGAAGCGGGTGCTTAGAAAATGCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR GCA 90 bp AGGAGCAGGCTGCTACCCTGCGGTCATGACGCACTTTCCCTAGCATCATGTGGTTCCATGTGTTTTCTCTaGCCTGGGCTTTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: RSRLLPCGHDALSLASCGSMCFL*PGLSGS
Trigger: GCTTCCAGAAAGCCCAGGGCAGAGAAAACACATGGA...ACCACATGATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGCAGCCTGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CTCCCGGAACAGGTGAGTGACAGACGATGGGCTGTGCTGTGCTGGATGTTCACTAGTTTGTGGGAAACCTaGCAATGCTTTCCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LPEQVSDRRWAVLCWMFTSLWET*QCFPCG
Trigger: GCCACAGGGAAAGCATTGGCAGGTTTCCCACAAACT...AGTGAACATCCAGCACAGCACAGCCCATCGTCTGTCACTCACCTGTTCCGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGTCCCCATTTCCACGGTaGCCTGGCCTGTGTTTACAA +
Preference number: 4 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGSPFPR*PGLCLQ
Trigger: TTGTAAACACAGGCCAGGGCACCGTGGAAATGGGGA...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGACTGAGTAAGAGGCACTaGTGGTTAGTAAACAGCCAT +
Preference number: 4 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGLSKRH*WLVNSH
Trigger: ATGGCTGTTTACTAACCAGCAGTGCCTCTTACTCAG...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGCTCATGGCCTTGCTCTaGTCCTTCCTGGCTGTGTTA +
Preference number: 4 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGLMALL*SFLAVL
Trigger: TAACACAGCCAGGAAGGAGCAGAGCAAGGCCATGAG...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AACCTCCTGAGATTAGCCTCCGAGGGGGTGTGCCCGGAGTTGACTCTCTTTCCTAGGCAGCCTTCATGCTaGGAAGCTAAACTCAGACAG +
Preference number: 4 (lower is better)
Translates to: NLLRLASEGVCPELTLFPRQPSC*EAKLRQ
Trigger: CTGTCTGAGTTTAGCTTCGCAGCATGAAGGCTGCCT...AGGAAAGAGAGTCAACTCCGGGCACACCCCCTCGGAGGCTAATCTCAGGAGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp ACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCGTCAATAGAGGCTCAACTTGGTaGCCCCTGCCCATCAGAGTC +
Preference number: 4 (lower is better)
Translates to: TMTAHLTLRPSSECTLVNRGSTW*PLPIRV
Trigger: GACTCTGATGGGCAGGGGGCACCAAGTTGAGCCTCT...ATTGACGAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CACAGAGAAAACCAGAGTTGGCTGTGCCTGGGGGTACATGAGCACTCTAAGACCTCAGGAGAAGGAGTGTaGACACTCACTCCCACAGCC +
Preference number: 4 (lower is better)
Translates to: HRENQSWLCLGVHEHSKTSGEGV*TLTPTA
Trigger: GGCTGTGGGAGTGAGTGTGCACACTCCTTCTCCTGA...GGTCTTAGAGTGCTCATGTACCCCCAGGCACAGCCAACTCTGGTTTTCTCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTAATCCCTTCCTTCCCTTTGCAGCTCAGGCTCCCGGAACAGGTGAGTGACAGAAACACGTTGCACACCTaGTACGTGCGGATCGTGTTC +
Preference number: 4 (lower is better)
Translates to: LIPSFPLQLRLPEQVSDRNTLHT*YVRIVF
Trigger: GAACACGATCCGCACGTACCAGGTGTGCAACGTGTT...TCTGTCACTCACCTGTTCCGGGAGCCTGAGCTGCAAAGGGAAGGAAGGGATTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTCTGCAGACATCAGGGCAGTTTGTTATGGGGGAAGAGTCAAGTGAGGATTTCCAACTTCATCTCCACGTaGATGCGGTGGGCGCCACGG +
Preference number: 4 (lower is better)
Translates to: LCRHQGSLLWGKSQVRISNFIST*MRWAPR
Trigger: CCGTGGCGCCCACCGCATCCACGTGGAGATGAAGTT...GGAAATCCTCACTTGACTCTTCCCCCATAACAAACTGCCCTGATGTCTGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AAAGTGACCCCAACCCGGAGAATGTCCCTTTGGGAGAGAAGCACGTGTGTTAGGTGGGGAAGGTCTTGGTaGCCGAGTCAAAGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: KVTPTRRMSLWERSTCVRWGRSW*PSQSQP
Trigger: AGGCTGACTTTGACTCGGCCACCAAGACCTTCCCCA...CCTAACACACGTGCTTCTCTCCCAAAGGGACATTCTCCGGGTTGGGGTCACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp GCACGTGTGTTAGGGAAATATGCGGGTGAAGGGGTCCTGTGCCTGGTAGAGAGCATCCACCTTCACCCATaGATTCTCCATCCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: ARVLGKYAGEGVLCLVESIHLHP*ILHPVG
Trigger: CCCAACTGGATGGAGAATCCATGGGTGAAGGTGGAT...GCTCTCTACCAGGCACAGGACCCCTTCACCCGCATATTTCCCTAACACACGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTCTTGAAAGTCCCAGATaGACAACCTCGGCAGACGGT +
Preference number: 4 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGLESPR*TTSADG
Trigger: ACCGTCTGCCGAGGTTGTCCATCTGGGACTTTCAAG...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGCCAGACTTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCCCAGGATCACGCCATTaGGCTGGTCCGGCTGGGACC +
Preference number: 4 (lower is better)
Translates to: SQTSWVQILALVYMTSVTPGSRH*AGPAGT
Trigger: GGTCCCAGCCGGACCAGCCCAATGGCGTGATCCTGG...GGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAAGTCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CCA 90 bp GTTCCCACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCGGAGCCGATGATGAGTaGCAACTTCTCCTGGATGCT +
Preference number: 4 (lower is better)
Translates to: VPTMTAHLTLRPSSECTLGADDE*QLLLDA
Trigger: AGCATCCAGGAGAAGTTGCCACTCATCATCGGCTCC...GAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGTGGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TCCCTCAACCTTCCTACCAACCCCCAGTTTGTAGGTGAGAAAACGGAGGCTGAGAGCGTGTTGACAATTTaGCCGAACTTGGGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: SLNLPTNPQFVGEKTEAESVLTI*PNLGRW
Trigger: CCACCGGCCCAAGTTCGGCCAAATTGTCAACACGCT...CTCAGCCTCCGTTTTCTCACCTACAAACTGGGGGTTGGTAGGAAGGTTGAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp CATGATCTATTCCTCACCCTCCAGATCACCCCACTTGGCTGGTGGGGCCGGTGGTCCCTGCTTCCCTATTaGGACATGATCTATTCCTCA +
Preference number: 4 (lower is better)
Translates to: HDLFLTLQITPLGWWGRWSLLPY*DMIYSS
Trigger: TGAGGAATAGATCATGTCCCAATAGGGAAGCAGGGA...CCACCGGCCCCACCAGCCAAGTGGGGTGATCTGGAGGGTGAGGAATAGATCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp GGAGAATGTCCCTTTGGGAGAGAAGCACGTGTGTTAGGGAAATATGCGGGTGAAGCAGGCAGCCACAGCTaGAGGGAGCGACTATGGTGT +
Preference number: 4 (lower is better)
Translates to: GECPFGREARVLGKYAGEAGSHS*RERLWC
Trigger: ACACCATAGTCGCTCCCTCCAGCTGTGGCTGCCTGC...TTCACCCGCATATTTCCCTAACACACGTGCTTCTCTCCCAAAGGGACATTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp CCATCTCCTCGGATCTGGGAAAGGTCCCGAGAGGTAGTCTCCTTGGCTCCCCTTTCTGAAAGTGTTTCTTaGCTCTGGCCAGGTCACCTT +
Preference number: 4 (lower is better)
Translates to: PSPRIWERSREVVSLAPLSESVS*LWPGHL
Trigger: AAGGTGACCTGGCCAGAGCCAAGAAACACTTTCAGA...AAGGGGAGCCAAGGAGACTACCTCTCGGGACCTTTCCCAGATCCGAGGAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGGAGCAGGCTGCTACCCTGCGGTCATGACGCACTTTCCCTAGCATCATGTGGTTTTCATCAACAGTCCTaGAGTGGGAAGCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: RSRLLPCGHDALSLASCGFHQQS*SGKLLH
Trigger: GTGGAGGAGCTTCCCACTCCAGGACTGTTGATGAAA...ACCACATGATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGCAGCCTGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TCCTTCCTCATGGGACTAAGGTGTATAAGTGTTTTGCACAGCCTGCCTCACCCACTGAGGGCGTCCCCATaGCCAAGACCTTTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: SFLMGLRCISVLHSLPHPLRASP*PRPLGP
Trigger: TGGGCCTAAAGGTCTTGGCCATGGGGACGCCCTCAG...TGGGTGAGGCAGGCTGTGCAAAACACTTATACACCTTAGTCCCATGAGGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGATTTGTTACCCTGAAGTaGAGACACAGAGGTCTGGTA +
Preference number: 4 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGFVTLK*RHRGLV
Trigger: TACCAGACCTCTGTGTCTCCACTTCAGGGTAACAAA...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTTTGCTCAAGAACCTGCTGTaGCTGGACTGTACATCACGC +
Preference number: 4 (lower is better)
Translates to: LRVSSTPYFMGPNLRLGLLKNLL*LDCTSR
Trigger: GCGTGATGTACAGTCCAGCCACAGCAGGTTCTTGAG...CAAACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTACCTCTAGAGAAGCCTaGAGGAAATGGGGTAGACAT +
Preference number: 4 (lower is better)
Translates to: VSLSAPSGGQGITVNDPGTSREA*RKWGRH
Trigger: ATGTCTACCCCATTTCCTCCAGGCTTCTCTAGAGGT...ACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTCCTGGCTTATTGCAATCCCTGTaGTTCCAACCTCCTGAGATT +
Preference number: 4 (lower is better)
Translates to: LSAPSGGQGITVNDPGPGLLQSL*FQPPEI
Trigger: AATCTCAGGAGGTTGGAACCACAGGGATTGCAATAA...GCCAGGACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TACCAACTGTGTGCAGAGCAGCCGGAAACTCCCCTAACACTGCTGGGCAGGCGGGAGAGGATAATGCTTTaGCACCTGGCATATGGTAAG +
Preference number: 4 (lower is better)
Translates to: YQLCAEQPETPLTLLGRRERIML*HLAYGK
Trigger: CTTACCATATGCCAGGTGCCAAAGCATTATCCTCTC...CCGCCTGCCCAGCAGTGTTAGGGGAGTTTCCGGCTGCTCTGCACACAGTTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTCTACCCCCTACTTCATaGGTCCTAATCTGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGLPPTS*VLICVW
Trigger: CCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAG...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp ACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCGTCAATGGGGCCGTTAGGTCTTaGGTAGAGACAGGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: TMTAHLTLRPSSECTLVNGAVRS*VETGPL
Trigger: CAAAGGCCCTGTCTCTACCCAAGACCTAACGGCCCC...ATTGACGAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GGCATTGGAGTAACAGGGTCAGGGTTGATCTTGGACACAGCTGGTGAGATTTCCGGGGCCGTTAGGTCTTaGGTAGAGACAGGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: GIGVTGSGLILDTAGEISGAVRS*VETGPL
Trigger: CAAAGGCCCTGTCTCTACCCAAGACCTAACGGCCCC...GGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTTTGGTGGCCTCCCAGCTCTaGAAGGCAGTGACTAAGATT +
Preference number: 4 (lower is better)
Translates to: LRVSSTPYFMGPNLRLGLVASQL*KAVTKI
Trigger: AATCTTAGTCACTGCCTTCCAGAGCTGGGAGGCCAC...CAAACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCGGCACCTCTGCCGTGTaGCCTCCCAGCTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLGTSAV*PPSSGR
Trigger: CCTTCCAGAGCTGGGAGGCCACACGGCAGAGGTGCC...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTGCTATGATTATGATTTaGGGGCTGGGCATGACCAAG +
Preference number: 4 (lower is better)
Translates to: VSLSAPSGGQGITVNDPGAMIMI*GLGMTK
Trigger: CTTGGTCATGCCCAGCCCCCAAATCATAATCATAGC...ACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GGCCGCTCCGGGGGCAATTCCTTCTCGGGGAGAGGAGTAGCTGGGAGGCATCCTGAGTTTGCTAGTCTGTaGAATGGGAGTAATAATTGT +
Preference number: 4 (lower is better)
Translates to: GRSGGNSFSGRGVAGRHPEFASL*NGSNNC
Trigger: ACAATTATTACTCCCATTCCACAGACTAGCAAACTC...AGGATGCCTCCCAGCTACTCCTCTCCCCGAGAAGGAATTGCCCCCGGAGCGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CAA 72 bp AGTTGGCCATCTTGCCCCTTGGTCCCTGCTTCCCTATaGGGACATGATCTATTCCTCACCCTCCAGATCACC +
Preference number: 4 (lower is better)
Translates to: SWPSCPLVPASL*GHDLFLTLQIT
Trigger: GGTGATCTGGAGGGTGAGGAATAGATCATGTCCCAATAGGGAAGCAGGGACCAAGGGGCAAGATGGCCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR TCA 90 bp TGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTCAGACACGCACGGCGATaGGGGACATGCAGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: WVQILALVYMTSVTLGKFRHARR*GTCSRH
Trigger: ATGGCGGCTGCATGTCCCTCATCGCCGTGCGTGTCT...GAACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR TCA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAAAGTGGTCCGGCTGTTaGTGGGACAGTGGGTACAGG +
Preference number: 4 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKKWSGC*WDSGYR
Trigger: CCTGTACCCACTGTCCCATCAACAGCCGGACCACTT...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AGAGCTTGTAGGTGGCAGGCAGACCTGGGTATCAGTCCACAGGTGACTCCAAAGCACAGCTCTTGCAGATaGTGTTGTAGACGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: RACRWQADLGISPQVTPKHSSCR*CCRRGP
Trigger: AGGACCTCGTCTACAACATCATCTGCAAGAGCTGTG...CTTTGGAGTCACCTGTGGACTGATACCCAGGTCTGCCTGCCACCTACAAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR TCA 90 bp TTCTCCACCTTAAGTTTGATGGCAGAAGCCATTTTGCAGAAGGCTGGGTCAAGGACGGTGCGGCTCACCTaGTGCATGATGGACACTGCC +
Preference number: 4 (lower is better)
Translates to: FSTLSLMAEAILQKAGSRTVRLT*CMMDTA
Trigger: GGCAGTGTCCATCATGCATCAGGTGAGCCGCACCGT...CCTTGACCCAGCCTTCTGCAAAATGGCTTCTGCCATCAAACTTAAGGTGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp ATGGAGGTTAAGATCACAAGCTGGAGCCAGACTTCTTGGGTTCAAATCCTGGCTACGGTGCGGCTCACCTaGTGCATGATGGACACTGCC +
Preference number: 4 (lower is better)
Translates to: MEVKITSWSQTSWVQILATVRLT*CMMDTA
Trigger: GGCAGTGTCCATCATGCATCAGGTGAGCCGCACCGT...AGCCAGGATTTGAACCCAAGAAGTCTGGCTCCAGCTTGTGATCTTAACCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR TCA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCTCCTCCATCATCATCTaGGACACGACGTCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPSSIII*DTTSKE
Trigger: CTCCTTTGACGTCGTGTCTCAGATGATGATGGAGGA...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp GCAGCTGGTCCCCATTTCCACGGTGCCCTGGCCTGTGTTTACAAGGCAGCTTTCATTGGACACATCGCATaGATCTCCCAAGCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: AAGPHFHGALACVYKAAFIGHIA*ISQALF
Trigger: AAAAAGGGCTTGGGAGATTCATGCGATGTGTCCAAT...GAAAGCTGCCTTGTAAACACAGGCCAGGGCACCGTGGAAATGGGGACCAGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGCTGGGACAGTCACAGTaGCATCTGTTTGTTACCCTG +
Preference number: 4 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGLGQSQ*HLFVTL
Trigger: CAGGGTAACAAACAGATGTCACTGTGACTGTCCCAG...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGCTGAGCACCAACAATaGCCCATTCTGGGGGCTTCG +
Preference number: 4 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKAEHQQ*PILGAS
Trigger: CGAAGCCCCCAGAATGGGTCATTGTTGGTGCTCAGC...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AGGCACCTGGCTCTGGAGTTTGCAGCAACACCCTGTGGTTGTCCAGTGTTAAGACTTCCTGTGCTTCAGTaGGGCAGGAGGATTAACTGG +
Preference number: 4 (lower is better)
Translates to: RHLALEFAATPCGCPVLRLPVLQ*GRRINW
Trigger: CCAGTTAATCCTCCTGCCTCACTGAAGCACAGGAAG...TCTTAACACTGGACAACCACAGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CTCTGCAGACATCAGGGCAGTTTGTTATGGGGGAAGAGTCAAGTGAGGATTTCCTTCTCCTGGAATAAATaGGGGCCGCTCCGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: LCRHQGSLLWGKSQVRISFSWNK*GPLRGQ
Trigger: TTGCCCCCGGAGCGGCCCTCATTTATTCCAGGAGAA...GGAAATCCTCACTTGACTCTTCCCCCATAACAAACTGCCCTGATGTCTGCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGACTCTTTCCTGTTATGTaGCAAAGGCCAAGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGLFPVM*QRPSPF
Trigger: AAAAGGACTTGGCCTTTGTCACATAACAGGAAAGAG...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AGGCACCTGGCTCTGGAGTTTGCAGCAACACCCTGTGGTTGTCCAGTGTTAAGAGGGTGTGCCCGGAGTTaGCTCTCTTTCCTGTTATGT +
Preference number: 4 (lower is better)
Translates to: RHLALEFAATPCGCPVLRGCARS*LSFLLC
Trigger: ACATAACAGGAAAGAGAGTCAACTCCGGGCACACCC...TCTTAACACTGGACAACCACAGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CTCCCGGAACAGGTGAGTGACAGACGATGGGCTGTGCTGTGCTGGATGTTCACTTTAAGACTCTGGCTCTaGATAGGAAGGGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LPEQVSDRRWAVLCWMFTLRLWL*IGRGSA
Trigger: AGCAGAACCCCTTCCTATTCAGAGCCAGAGTCTTAA...AGTGAACATCCAGCACAGCACAGCCCATCGTCTGTCACTCACCTGTTCCGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTTTGTTGACTCAAACACGTTaGACACCTGGTACGTGCGGA +
Preference number: 4 (lower is better)
Translates to: LRVSSTPYFMGPNLRLGLLTQTR*TPGTCG
Trigger: TCCGCACGTACCAGGTGTGCAACGTGTTTGAGTCAA...CAAACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCTTGACTCAAACACGTTaGACACCTGGTACGTGCGGA +
Preference number: 4 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPLTQTR*TPGTCG
Trigger: TCCGCACGTACCAGGTGTGCAACGTGTTTGAGTCAA...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR GCA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAACGCTGGGGATGCTGCTaGAGTCACGCACCGAAAACT +
Preference number: 4 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKRWGCC*SHAPKT
Trigger: AGTTTTCGGTGCGTGACTGCAGCAGCATCCCCAGCG...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CTCTGCAGACATCAGGGCAGTTTGTTATGGGGGAAGAGTCAAGTGAGGATTTCCCGCTGGGGATGCTGCTaGAGTCACGCACCGAAAACT +
Preference number: 4 (lower is better)
Translates to: LCRHQGSLLWGKSQVRISRWGCC*SHAPKT
Trigger: AGTTTTCGGTGCGTGACTGCAGCAGCATCCCCAGCG...GGAAATCCTCACTTGACTCTTCCCCCATAACAAACTGCCCTGATGTCTGCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GACTTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCCAGGTAGAAGCCGCTaGGGGACACAGGTCCGAAGC +
Preference number: 4 (lower is better)
Translates to: DFLGSNPGSSIYDLCDLGPGRSR*GTQVRS
Trigger: GCTTCGGACCTGTGTCCCGCAGCGGCTTCTACCTGG...CCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR GCA 90 bp ATGGAGGTTAAGATCACAAGCTGGAGCCAGACTTCTTGGGTTCAAATCCTGGCTAACGGCCTCGAAGCCTaGTTTGCACATGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: MEVKITSWSQTSWVQILANGLEA*FAHAAP
Trigger: GGGCGCTGCATGTGCAAAGCAGGCTTCGAGGCCGTT...AGCCAGGATTTGAACCCAAGAAGTCTGGCTCCAGCTTGTGATCTTAACCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR GCA 90 bp CACAGAGAAAACCAGAGTTGGCTGTGCCTGGGGGTACATGAGCACTCTAAGACCCTCTGTAGTAGCCATTaGGGCAGACACAGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: HRENQSWLCLGVHEHSKTLCSSH*GRHSWW
Trigger: CCACCAACTGTGTCTGCCGCAATGGCTACTACAGAG...GGTCTTAGAGTGCTCATGTACCCCCAGGCACAGCCAACTCTGGTTTTCTCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GAGCCAGACTTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCGGAGGGGATGGTTGTaGAGGGCATGTCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: EPDFLGSNPGSSIYDLCDRRGWL*RACPGG
Trigger: ACCCCCTGGACATGCCCTGCACAACCATCCCCTCCG...GTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAAGTCTGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR GCA 90 bp AGGCACCTGGCTCTGGAGTTTGCAGCAACACCCTGTGGTTGTCCAGTGTTAAGATCTGGAAGTACATCTTaGCGCTGTAGCGCCCGTAAC +
Preference number: 4 (lower is better)
Translates to: RHLALEFAATPCGCPVLRSGSTS*RCSARN
Trigger: GTTACGGGCGCTACAGCGGCAAGATGTACTTCCAGA...TCTTAACACTGGACAACCACAGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AAAGTGACCCCAACCCGGAGAATGTCCCTTTGGGAGAGAAGCACGTGTGTTAGGCAAAGATCTCTCTCTTaGCTGGCAGCTTCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: KVTPTRRMSLWERSTCVRQRSLS*LAASGG
Trigger: GCCACCTGAAGCTGCCAGGCAAGAGAGAGATCTTTG...CCTAACACACGTGCTTCTCTCCCAAAGGGACATTCTCCGGGTTGGGGTCACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR GCA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGGCATTACAGGTGCATaGCACCTTGCGTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPGITGA*HLAWLI
Trigger: AATTAGCCACGCAAGGTGGCATGCACCTGTAATGCC...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR GCA 90 bp CCATCTCCTCGGATCTGGGAAAGGTCCCGAGAGGTAGTCTCCTTGGCTCCCCTTGAGTTGGAGAGAAACTaGTTTTGTCTCCGATTGGAC +
Preference number: 4 (lower is better)
Translates to: PSPRIWERSREVVSLAPLELERN*FCLRLD
Trigger: GTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTC...AAGGGGAGCCAAGGAGACTACCTCTCGGGACCTTTCCCAGATCCGAGGAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp ACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCGTCAATAACCAGAGTTGGCTGTaGCTGGGGGTACATGAGCAC +
Preference number: 4 (lower is better)
Translates to: TMTAHLTLRPSSECTLVNNQSWL*LGVHEH
Trigger: GTGCTCATGTACCCCCAGGCACAGCCAACTCTGGTT...ATTGACGAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGGCACCTGGCTCTGGAGTTTGCAGCAACACCCTGTGGTTGTCCAGTGTTAAGAACAGACGATGGGCTGTaGTGTGCTGGATGTTCACTC +
Preference number: 4 (lower is better)
Translates to: RHLALEFAATPCGCPVLRTDDGL*CAGCSL
Trigger: GAGTGAACATCCAGCACAGCACAGCCCATCGTCTGT...TCTTAACACTGGACAACCACAGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CACAGAGAAAACCAGAGTTGGCTGTGCCTGGGGGTACATGAGCACTCTAAGACCACAGACGATGGGCTGTaGTGTGCTGGATGTTCACTC +
Preference number: 4 (lower is better)
Translates to: HRENQSWLCLGVHEHSKTTDDGL*CAGCSL
Trigger: GAGTGAACATCCAGCACAGCACAGCCCATCGTCTGT...GGTCTTAGAGTGCTCATGTACCCCCAGGCACAGCCAACTCTGGTTTTCTCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCCTTGGCAACATGGCCTaGCACTCCCCGCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLLGNMA*HSPLSS
Trigger: GCTGCTCAGCGGGGAGTGGCAGGCCATGTTGCCAAG...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GGAGACATTGGAAACAGAAAAATCCAAAGCTCATGGCCTTGCTCTGCTCCTTCCCACAGCTCTGCTAGCTaGACCCTCCCAGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GDIGNRKIQSSWPCSAPSHSSAS*TLPEQL
Trigger: CAGCTGCTCTGGGAGGGTGCAGCTAGCAGAGCTGTG...GGAAGGAGCAGAGCAAGGCCATGAGCTTTGGATTTTTCTGTTTCCAATGTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGGCACCTGGCTCTGGAGTTTGCAGCAACACCCTGTGGTTGTCCAGTGTTAAGATGTGAGGCTAGCAACTaGTCACAAGGTGGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: RHLALEFAATPCGCPVLRCEASN*SQGGGR
Trigger: TCTGCCACCACCTTGTGAGCAGTTGCTAGCCTCACA...TCTTAACACTGGACAACCACAGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GGCATTGGAGTAACAGGGTCAGGGTTGATCTTGGACACAGCTGGTGAGATTTCCCAAAGCTCATGGCCTTaGTCTGCTCCTTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GIGVTGSGLILDTAGEISQSSWP*SAPSWL
Trigger: CAGCCAGGAAGGAGCAGAGCAAGGCCATGAGCTTTG...GGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGGAAGGGCTGCTTAGAAGAGCAACCCTTAGCACCTGGGTCACGTGCATCCCAAAGGCAGCCTTCATGCTaGGAAGCTAAACTCAGACAG +
Preference number: 4 (lower is better)
Translates to: RKGCLEEQPLAPGSRASQRQPSC*EAKLRQ
Trigger: CTGTCTGAGTTTAGCTTCGCAGCATGAAGGCTGCCT...TTGGGATGCACGTGACCCAGGTGCTAAGGGTTGCTCTTCTAAGCAGCCCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GTTCCCACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCGGAAGGCCTGATGCATaGAATTCTGCCACTCTACCA +
Preference number: 4 (lower is better)
Translates to: VPTMTAHLTLRPSSECTLGRPDA*NSATLP
Trigger: TGGTAGAGTGGCAGAATTGCATGCATCAGGCCTTCC...GAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGTGGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGGAGCTGCAGCTTCCTTGCTaGAGGGAGGGAAATTCCACC +
Preference number: 4 (lower is better)
Translates to: CNSATLPGKDVLHPTQKELQLPC*REGNST
Trigger: GGTGGAATTTCCCTCCCTGCAGCAAGGAAGCTGCAG...CTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GCACTCAGGCCATCATCTATTCTGATTGGTCTGCCCGAGTCTTCGCAGTTGATAGCAAATTCCTGGCCCTaGAGCTTCCTTGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: ALRPSSILIGLPESSQLIANSWP*SFLAAG
Trigger: CCCTGCAGCAAGGAAGCTGCAGGGCCAGGAATTTGC...TATCAACTGCGAAGACTCGGGCAGACCAATCAGAATAGATGATGGCCTGAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TCCTTCCTCATGGGACTAAGGTGTATAAGTGTTTTGCACAGCCTGCCTCACCCAGTGAGTGAATGTCCCTaGCTGGCCTATGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: SFLMGLRCISVLHSLPHPVSECP*LAYAGP
Trigger: TGGCCCAGCATAGGCCAGGCAGGGACATTCACTCAC...TGGGTGAGGCAGGCTGTGCAAAACACTTATACACCTTAGTCCCATGAGGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GGCATTGGAGTAACAGGGTCAGGGTTGATCTTGGACACAGCTGGTGAGATTTCCAAAAGTTGGGCACGGTaGCTGGCACATTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: GIGVTGSGLILDTAGEISKSWAR*LAHCWH
Trigger: GTGCCAGCAATGTGCCAGGCACCGTGCCCAACTTTT...GGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGGAGCAGGCTGCTACCCTGCGGTCATGACGCACTTTCCCTAGCATCATGTGGTCGTAGCCAGTTGTTCTaGCTTGACTCAAACACGTTG +
Preference number: 4 (lower is better)
Translates to: RSRLLPCGHDALSLASCGRSQLF*LDSNTL
Trigger: CAACGTGTTTGAGTCAAGCCAGAACAACTGGCTACG...ACCACATGATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGCAGCCTGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTCCCGGAACAGGTGAGTGACAGACGATGGGCTGTGCTGTGCTGGATGTTCACTCGTAGCCAGTTGTTCTaGCTTGACTCAAACACGTTG +
Preference number: 4 (lower is better)
Translates to: LPEQVSDRRWAVLCWMFTRSQLF*LDSNTL
Trigger: CAACGTGTTTGAGTCAAGCCAGAACAACTGGCTACG...AGTGAACATCCAGCACAGCACAGCCCATCGTCTGTCACTCACCTGTTCCGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAACCCGACAGGGTTTCCTaGAAGATGGCGCCATTCTGG +
Preference number: 4 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKPDRVS*KMAPFW
Trigger: CCAGAATGGCGCCATCTTCCAGGAAACCCTGTCGGG...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTCCACCTCTTCCGCATTaGCGATGCAGCTGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: LGSNPGSSIYDLCDLGQVPPLPH*RCSCPG
Trigger: CCCGGGGCAGCTGCATCGCCAATGCGGAAGAGGTGG...AACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CCA 90 bp TTGGTCCCTGCTTCCCTATTGGGACATGATCTATTCCTCACCCTCCAGATCACCCAGGCCTCATCCCCTTaGTTGGCCTTGAAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: LVPASLLGHDLFLTLQITQASSP*LALKVP
Trigger: TGGGACTTTCAAGGCCAACCAAGGGGATGAGGCCTG...GGTGATCTGGAGGGTGAGGAATAGATCATGTCCCAATAGGGAAGCAGGGACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp CTCTGCAGACATCAGGGCAGTTTGTTATGGGGGAAGAGTCAAGTGAGGATTTCCGGCAGACACAGTTGGTaGCCCCTTCAGAAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: LCRHQGSLLWGKSQVRISGRHSW*PLQKWS
Trigger: GGACCACTTCTGAAGGGGCCACCAACTGTGTCTGCC...GGAAATCCTCACTTGACTCTTCCCCCATAACAAACTGCCCTGATGTCTGCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GCACTCAGGCCATCATCTATTCTGATTGGTCTGCCCGAGTCTTCGCAGTTGATATGCGGCAGACACAGTTaGTGGCCCCTTCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: ALRPSSILIGLPESSQLICGRHS*WPLQKW
Trigger: CCACTTCTGAAGGGGCCACCAACTGTGTCTGCCGCA...TATCAACTGCGAAGACTCGGGCAGACCAATCAGAATAGATGATGGCCTGAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GGAGACATTGGAAACAGAAAAATCCAAAGCTCATGGCCTTGCTCTGCTCCTTCCCTGGAAATCACAGCCTaGGGCGCGGAGGGGATGGTT +
Preference number: 4 (lower is better)
Translates to: GDIGNRKIQSSWPCSAPSLEITA*GAEGMV
Trigger: AACCATCCCCTCCGCGCCCCAGGCTGTGATTTCCAG...GGAAGGAGCAGAGCAAGGCCATGAGCTTTGGATTTTTCTGTTTCCAATGTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGATGGACACTGCCGATaGAGCTGCCTGGTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKDGHCR*SCLVGG
Trigger: ACCACCAACCAGGCAGCTCCATCGGCAGTGTCCATC...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTCATCACGCCATTGGGCTaGTCCGGCTGGGACCACGAC +
Preference number: 4 (lower is better)
Translates to: WVQILALVYMTSVTLGKFITPLG*SGWDHD
Trigger: GTCGTGGTCCCAGCCGGACCAGCCCAATGGCGTGAT...GAACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CCA 90 bp CCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGCTTCTGTCATGGTCTaGAAGTACATCTTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: PSFELHVFLVTSRGWHRLASVMV*KYILPL
Trigger: CAGCGGCAAGATGTACTTCCAGACCATGACAGAAGC...CAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTGCTTCTGTCATGGTCTaGAAGTACATCTTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGASVMV*KYILPL
Trigger: CAGCGGCAAGATGTACTTCCAGACCATGACAGAAGC...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTCCCGGAACAGGTGAGTGACAGACGATGGGCTGTGCTGTGCTGGATGTTCACTACTCGGCTTCTGTCATaGTCTGGAAGTACATCTTGC +
Preference number: 4 (lower is better)
Translates to: LPEQVSDRRWAVLCWMFTTRLLS*SGSTSC
Trigger: GCAAGATGTACTTCCAGACCATGACAGAAGCCGAGT...AGTGAACATCCAGCACAGCACAGCCCATCGTCTGTCACTCACCTGTTCCGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCTCCTGGATGCTTGTCTaGTACTCGGCTTCTGTCATG +
Preference number: 4 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPSWMLV*YSASVM
Trigger: CATGACAGAAGCCGAGTACCAGACAAGCATCCAGGA...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CCA 90 bp TCCCTCAACCTTCCTACCAACCCCCAGTTTGTAGGTGAGAAAACGGAGGCTGAGGGAGCCGATGATGAGTaGCAACTTCTCCTGGATGCT +
Preference number: 4 (lower is better)
Translates to: SLNLPTNPQFVGEKTEAEGADDE*QLLLDA
Trigger: AGCATCCAGGAGAAGTTGCCACTCATCATCGGCTCC...CTCAGCCTCCGTTTTCTCACCTACAAACTGGGGGTTGGTAGGAAGGTTGAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp AGGGAGTTGGAGAGAAACTGCTTTTGTCTCCGATTGGACACATCGCATGAATCTTTCCGCCCAGGGCACTaGTGTAGGTGGGGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: RELERNCFCLRLDTSHESFRPGH*CRWGLR
Trigger: CCTCAGACCCCACCTACACCAGTGCCCTGGGCGGAA...AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
CDS-3UTR CCA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCCAGTCCAGCATGAGTTaGTGCAGGGCGCTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLQSSMS*CRALGQ
Trigger: CTGCCCGAGCGCCCTGCACCAACTCATGCTGGACTG...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGCGGAGAATGTCCCTTTaGGAGAGAAGCACGTGTGTT +
Preference number: 4 (lower is better)
Translates to: PSFELHVFLVTSRGWHRLRRMSL*ERSTCV
Trigger: AACACACGTGCTTCTCTCCCAAAGGGACATTCTCCG...CAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp TCCTTCCTCATGGGACTAAGGTGTATAAGTGTTTTGCACAGCCTGCCTCACCCATCTGAATGGCCCAGATaGCCCCATGGCAGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: SFLMGLRCISVLHSLPHPSEWPR*PHGSGL
Trigger: AAGCCCACTGCCATGGGGCCATCTGGGCCATTCAGA...TGGGTGAGGCAGGCTGTGCAAAACACTTATACACCTTAGTCCCATGAGGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGGCACCTGGCTCTGGAGTTTGCAGCAACACCCTGTGGTTGTCCAGTGTTAAGAAGAGTTGGCTGTGCCTaGGGGTACATGAGCACTCTA +
Preference number: 4 (lower is better)
Translates to: RHLALEFAATPCGCPVLRRVGCA*GYMSTL
Trigger: TAGAGTGCTCATGTACCCCCAGGCACAGCCAACTCT...TCTTAACACTGGACAACCACAGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGGAGCTAGCTGGCTGCCTGTaGCCCGAATCTTTCTCACTG +
Preference number: 4 (lower is better)
Translates to: CNSATLPGKDVLHPTQKELAGCL*PESFSL
Trigger: CAGTGAGAAAGATTCGGGCCACAGGCAGCCAGCTAG...CTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GGCATTGGAGTAACAGGGTCAGGGTTGATCTTGGACACAGCTGGTGAGATTTCCCTAGCTGGCTGCCTGTaGCCCGAATCTTTCTCACTG +
Preference number: 4 (lower is better)
Translates to: GIGVTGSGLILDTAGEISLAGCL*PESFSL
Trigger: CAGTGAGAAAGATTCGGGCCACAGGCAGCCAGCTAG...GGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CAGACGATGGGCTGTGCTGTGCTGGATGTTCACTCTGACCGTGGCGCTTCTAGCTCGCAGTTGATATTTTaGATATCATCCCCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: QTMGCAVLDVHSDRGASSSQLIF*ISSPRE
Trigger: CTCCCTCGGGGATGATATCCAAAATATCAACTGCGA...GCTAGAAGCGCCACGGTCAGAGTGAACATCCAGCACAGCACAGCCCATCGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GCACTCAGGCCATCATCTATTCTGATTGGTCTGCCCGAGTCTTCGCAGTTGATAGAAGCCCCTAGATGGTaGCAGGGTGGGGACCAACTA +
Preference number: 4 (lower is better)
Translates to: ALRPSSILIGLPESSQLIEAPRW*QGGDQL
Trigger: TAGTTGGTCCCCACCCTGCCACCATCTAGGGGCTTC...TATCAACTGCGAAGACTCGGGCAGACCAATCAGAATAGATGATGGCCTGAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TCCTTCCTCATGGGACTAAGGTGTATAAGTGTTTTGCACAGCCTGCCTCACCCACTTCCCCCGTTCCACTaGCCCATCCAGACACAACTC +
Preference number: 4 (lower is better)
Translates to: SFLMGLRCISVLHSLPHPLPPFH*PIQTQL
Trigger: GAGTTGTGTCTGGATGGGCCAGTGGAACGGGGGAAG...TGGGTGAGGCAGGCTGTGCAAAACACTTATACACCTTAGTCCCATGAGGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTTACAGACAGATGGCCTaGTTGGAATCTTCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: VSLSAPSGGQGITVNDPGYRQMA*LESSGN
Trigger: ATTCCCAGAAGATTCCAACCAGGCCATCTGTCTGTA...ACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTGAGGATTTCCATGTCTaGAGGAATCTCCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGEDFHV*RNLLEE
Trigger: CTCCTCCAGGAGATTCCTCCAGACATGGAAATCCTC...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTAATCCCTTCCTTCCCTTTGCAGCTCAGGCTCCCGGAACAGGTGAGTGACAGACAGGGCAGTTTGTTATaGGGGAAGAGTCAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: LIPSFPLQLRLPEQVSDRQGSLL*GKSQVR
Trigger: CCTCACTTGACTCTTCCCCCATAACAAACTGCCCTG...TCTGTCACTCACCTGTTCCGGGAGCCTGAGCTGCAAAGGGAAGGAAGGGATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TCCTTCCTCATGGGACTAAGGTGTATAAGTGTTTTGCACAGCCTGCCTCACCCAAGCCGTGTCTTGGTCTaGGTAGCCGGGCTTGGTAGT +
Preference number: 4 (lower is better)
Translates to: SFLMGLRCISVLHSLPHPSRVLV*VAGLGS
Trigger: ACTACCAAGCCCGGCTACCCAGACCAAGACACGGCT...TGGGTGAGGCAGGCTGTGCAAAACACTTATACACCTTAGTCCCATGAGGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGGCACCTGGCTCTGGAGTTTGCAGCAACACCCTGTGGTTGTCCAGTGTTAAGACAAAAGGAGGGTCTTTaGCCCTTGCCAAGGTGCATC +
Preference number: 4 (lower is better)
Translates to: RHLALEFAATPCGCPVLRQKEGL*PLPRCI
Trigger: GATGCACCTTGGCAAGGGCCAAAGACCCTCCTTTTG...TCTTAACACTGGACAACCACAGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTTTGTACTCAGCTGTAGCCTaGAACAGCCAGCCCCTTTTA +
Preference number: 4 (lower is better)
Translates to: LRVSSTPYFMGPNLRLGLYSAVA*NSQPLL
Trigger: TAAAAGGGGCTGGCTGTTCCAGGCTACAGCTGAGTA...CAAACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TCTGCTACTTATGTACCTGCAGGGGCTCACCCTGATTCCCAGGGCATCGAAGGCGGAAATATTCCTCAGTaGGGGTCTCCCAAGGCAAAT +
Preference number: 4 (lower is better)
Translates to: SATYVPAGAHPDSQGIEGGNIPQ*GSPKAN
Trigger: ATTTGCCTTGGGAGACCCCCACTGAGGAATATTTCC...GCCTTCGATGCCCTGGGAATCAGGGTGAGCCCCTGCAGGTACATAAGTAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTCTGCAGACATCAGGGCAGTTTGTTATGGGGGAAGAGTCAAGTGAGGATTTCCGTTGGGCACGGTGCCTaGCACATTGCTGGCACTCAA +
Preference number: 4 (lower is better)
Translates to: LCRHQGSLLWGKSQVRISVGHGA*HIAGTQ
Trigger: TTGAGTGCCAGCAATGTGCCAGGCACCGTGCCCAAC...GGAAATCCTCACTTGACTCTTCCCCCATAACAAACTGCCCTGATGTCTGCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTTTGTGTATAAAAAGTTaGGCACGGTGCCTGGCACAT +
Preference number: 4 (lower is better)
Translates to: VSLSAPSGGQGITVNDPGLCIKS*ARCLAH
Trigger: ATGTGCCAGGCACCGTGCCCAACTTTTTATACACAA...ACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGGAGTCAGAGGCCACTTACTaGCTGTGTGACCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: CNSATLPGKDVLHPTQKESEATY*LCDLGE
Trigger: CTCTCCCAGGTCACACAGCCAGTAAGTGGCCTCTGA...CTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTTGGCGCCATTCTGGATaGTGCGGGGGCACTTGCGGT +
Preference number: 4 (lower is better)
Translates to: LGSNPGSSIYDLCDLGQVWRHSG*CGGTCG
Trigger: ACCGCAAGTGCCCCCGCATCATCCAGAATGGCGCCA...AACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR TCA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCCGTTACAGTAGAGCTTaGTGGGTACATCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPRYSRA*WVHPPL
Trigger: AAGAGGTGGATGTACCCATCAAGCTCTACTGTAACG...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTCGTTACAGTAGAGCTTaGTGGGTACATCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGRYSRA*WVHPPL
Trigger: AAGAGGTGGATGTACCCATCAAGCTCTACTGTAACG...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AGCCAGACTTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCGGGCCAGCAGGTCACTaGTGTAAATGCGTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: SQTSWVQILALVYMTSVTGPAGH*CKCVAR
Trigger: CCGAGCCACGCATTTACATCAGTGACCTGCTGGCCC...GGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAAGTCTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR TCA 90 bp AGGGAGTTGGAGAGAAACTGCTTTTGTCTCCGATTGGACACATCGCATGAATCTTTCACAGAGGCGAACTaGGGCGAGAAGGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RELERNCFCLRLDTSHESFTEAN*GEKGLW
Trigger: CCAGAGCCCCTTCTCGCCTCAGTTCGCCTCTGTGAA...AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
CDS-3UTR TCA 90 bp TTTTTCTTAATCCCTGTCTACAGCAGACCCTCTCTCTGCAGACATCAGGGCAGTGGCTCACCTGATGCATaGTGGACACTGCCGATGGAG +
Preference number: 4 (lower is better)
Translates to: FFLIPVYSRPSLCRHQGSGSPDA*WTLPME
Trigger: CTCCATCGGCAGTGTCCATCATGCATCAGGTGAGCC...ACTGCCCTGATGTCTGCAGAGAGAGGGTCTGCTGTAGACAGGGATTAAGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AGAGCTTGTAGGTGGCAGGCAGACCTGGGTATCAGTCCACAGGTGACTCCAAAGTCTTGTCTAGCGTGTTaGCAATTTGGCCGAACTTGG +
Preference number: 4 (lower is better)
Translates to: RACRWQADLGISPQVTPKSCLAC*QFGRTW
Trigger: CCAAGTTCGGCCAAATTGTCAACACGCTAGACAAGA...CTTTGGAGTCACCTGTGGACTGATACCCAGGTCTGCCTGCCACCTACAAGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR TCA 90 bp CTAATCCCTTCCTTCCCTTTGCAGCTCAGGCTCCCGGAACAGGTGAGTGACAGATCTTGTCTAGCGTGTTaGCAATTTGGCCGAACTTGG +
Preference number: 4 (lower is better)
Translates to: LIPSFPLQLRLPEQVSDRSCLAC*QFGRTW
Trigger: CCAAGTTCGGCCAAATTGTCAACACGCTAGACAAGA...TCTGTCACTCACCTGTTCCGGGAGCCTGAGCTGCAAAGGGAAGGAAGGGATTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AGGGAGTTGGAGAGAAACTGCTTTTGTCTCCGATTGGACACATCGCATGAATCTGGTGGCCAGCCAAAGTaGCCCCAACCCGGAGAATGT +
Preference number: 4 (lower is better)
Translates to: RELERNCFCLRLDTSHESGGQPK*PQPGEC
Trigger: ACATTCTCCGGGTTGGGGTCACTTTGGCTGGCCACC...AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
CDS-3UTR TCA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCTGGCGTTGTACTCACTaGGCTCCTTCTCATAGTACT +
Preference number: 4 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPWRCTH*APSHST
Trigger: AGTACTATGAGAAGGAGCTCAGTGAGTACAACGCCA...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000374632.7
CDS-3UTR TCA 90 bp ACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCGTCAATGGGAAAACTGGGTTTTaGCCATCTGAGGGCACTCAG +
Preference number: 4 (lower is better)
Translates to: TMTAHLTLRPSSECTLVNGKTGF*PSEGTQ
Trigger: CTGAGTGCCCTCAGATGGTCAAAACCCAGTTTTCCC...ATTGACGAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TTTTTCTTAATCCCTGTCTACAGCAGACCCTCTCTCTGCAGACATCAGGGCAGTGCTACCCTGCGGTCATaGCGCACTTTCCCTAGCATC +
Preference number: 4 (lower is better)
Translates to: FFLIPVYSRPSLCRHQGSATLRS*RTFPSI
Trigger: GATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGC...ACTGCCCTGATGTCTGCAGAGAGAGGGTCTGCTGTAGACAGGGATTAAGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCTCCAAGCAGCTGAAGTaGCTCTTTGGATTATCTGCG +
Preference number: 4 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPSKQLK*LFGLSA
Trigger: CGCAGATAATCCAAAGAGTCACTTCAGCTGCTTGGA...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR TCA 90 bp GGCATTGGAGTAACAGGGTCAGGGTTGATCTTGGACACAGCTGGTGAGATTTCCGGGTGTGCCCGGAGTTaGCTCTCTTTCCTGTTATGT +
Preference number: 4 (lower is better)
Translates to: GIGVTGSGLILDTAGEISGCARS*LSFLLC
Trigger: ACATAACAGGAAAGAGAGTCAACTCCGGGCACACCC...GGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GTTCCCACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCTGTCTCACAGAGGTGTaGGGATTAGGCAAGACATTG +
Preference number: 4 (lower is better)
Translates to: VPTMTAHLTLRPSSECTLCLTEV*GLGKTL
Trigger: CAATGTCTTGCCTAATCCTCACACCTCTGTGAGACA...GAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGTGGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTTGTCTCACAGAGGTGTaGGGATTAGGCAAGACATTG +
Preference number: 4 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGCLTEV*GLGKTL
Trigger: CAATGTCTTGCCTAATCCTCACACCTCTGTGAGACA...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGGAGCGGGGATCTGGGATTTaGCTGGCAAAGGATCTGACA +
Preference number: 4 (lower is better)
Translates to: CNSATLPGKDVLHPTQKERGSGI*LAKDLT
Trigger: TGTCAGATCCTTTGCCAGTCAAATCCCAGATCCCCG...CTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGGGAGTTGGAGAGAAACTGCTTTTGTCTCCGATTGGACACATCGCATGAATCTACCTGCCACGGTGCGTaGCCGCACCTGGAAGACATA +
Preference number: 4 (lower is better)
Translates to: RELERNCFCLRLDTSHESTCHGA*PHLEDI
Trigger: TATGTCTTCCAGGTGCGGGCACGCACCGTGGCAGGT...AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
CDS-3UTR GCA 90 bp ACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCGTCAATCAAAGATCTCTCTCTTaGCTGGCAGCTTCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: TMTAHLTLRPSSECTLVNQRSLS*LAASGG
Trigger: GCCACCTGAAGCTGCCAGGCAAGAGAGAGATCTTTG...ATTGACGAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GGAGACATTGGAAACAGAAAAATCCAAAGCTCATGGCCTTGCTCTGCTCCTTCCGCTGACGGCAGTCACTaGAGTATCAGTCCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: GDIGNRKIQSSWPCSAPSADGSH*SISPRG
Trigger: GCCTCGAGGACTGATACTGCAGTGACTGCCGTCAGC...GGAAGGAGCAGAGCAAGGCCATGAGCTTTGGATTTTTCTGTTTCCAATGTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GTTCCCACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCCCCGAGTCCAGGAATTaGTGTAAACAAACCCAGATG +
Preference number: 4 (lower is better)
Translates to: VPTMTAHLTLRPSSECTLPESRN*CKQTQM
Trigger: CATCTGGGTTTGTTTACAGCAATTCCTGGACTCGGG...GAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGTGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGGGAGTTGGAGAGAAACTGCTTTTGTCTCCGATTGGACACATCGCATGAATCTTTAAGTGTCTCCTACTaGCCCGCCACCCGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: RELERNCFCLRLDTSHESLSVSY*PATRVP
Trigger: AGGGACCCGGGTGGCGGGGCAGTAGGAGACACTTAA...AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GGAGACATTGGAAACAGAAAAATCCAAAGCTCATGGCCTTGCTCTGCTCCTTCCAGCAGGCTGCTACCCTaGGGTCATGACGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: GDIGNRKIQSSWPCSAPSSRLLP*GHDALS
Trigger: GGAAAGTGCGTCATGACCGCAGGGTAGCAGCCTGCT...GGAAGGAGCAGAGCAAGGCCATGAGCTTTGGATTTTTCTGTTTCCAATGTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGGAAGGGCTGCTTAGAAGAGCAACCCTTAGCACCTGGGTCACGTGCATCCCAACCTCACCCAGTCCAATaGTCTCATTTTACAGATGGC +
Preference number: 4 (lower is better)
Translates to: RKGCLEEQPLAPGSRASQPHPVQ*SHFTDG
Trigger: GCCATCTGTAAAATGAGAGCATTGGACTGGGTGAGG...TTGGGATGCACGTGACCCAGGTGCTAAGGGTTGCTCTTCTAAGCAGCCCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGGAAGGGCTGCTTAGAAGAGCAACCCTTAGCACCTGGGTCACGTGCATCCCAAGGTGGTGTATTCGCATaGGTATGTAGCATCACACAG +
Preference number: 4 (lower is better)
Translates to: RKGCLEEQPLAPGSRASQGGVFA*VCSITQ
Trigger: CTGTGTGATGCTACATACGCATGCGAATACACCACC...TTGGGATGCACGTGACCCAGGTGCTAAGGGTTGCTCTTCTAAGCAGCCCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGGCACCTGGCTCTGGAGTTTGCAGCAACACCCTGTGGTTGTCCAGTGTTAAGAGGAAGGCCTGATGCATaGAATTCTGCCACTCTACCA +
Preference number: 4 (lower is better)
Translates to: RHLALEFAATPCGCPVLRGRPDA*NSATLP
Trigger: TGGTAGAGTGGCAGAATTGCATGCATCAGGCCTTCC...TCTTAACACTGGACAACCACAGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAACTGCAGCTTCCTTGCTaGAGGGAGGGAAATTCCACC +
Preference number: 4 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKLQLPC*REGNST
Trigger: GGTGGAATTTCCCTCCCTGCAGCAAGGAAGCTGCAG...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GGCATTGGAGTAACAGGGTCAGGGTTGATCTTGGACACAGCTGGTGAGATTTCCCGGTGCCTGGCACATTaGTGGCACTCAAGAAATAGC +
Preference number: 4 (lower is better)
Translates to: GIGVTGSGLILDTAGEISRCLAH*WHSRNS
Trigger: GCTATTTCTTGAGTGCCAGCAATGTGCCAGGCACCG...GGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGCCAGACTTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCAACTTCATCTCCACGTaGATGCGGTGGGCGCCACGG +
Preference number: 4 (lower is better)
Translates to: SQTSWVQILALVYMTSVTNFIST*MRWAPR
Trigger: CCGTGGCGCCCACCGCATCCACGTGGAGATGAAGTT...GGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAAGTCTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CCA 90 bp GGCATTGGAGTAACAGGGTCAGGGTTGATCTTGGACACAGCTGGTGAGATTTCCAGTTGGGGAAGGTCTTaGTGGCCGAGTCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: GIGVTGSGLILDTAGEISSWGRS*WPSQSQ
Trigger: CTGACTTTGACTCGGCCACCAAGACCTTCCCCAACT...GGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAAAGATGGCGCCATTCTaGATGATGCGGGGGCACTTG +
Preference number: 4 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKKMAPF*MMRGHL
Trigger: CAAGTGCCCCCGCATCATCCAGAATGGCGCCATCTT...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp ATGGAGGTTAAGATCACAAGCTGGAGCCAGACTTCTTGGGTTCAAATCCTGGCTTGCGGCAGACACAGTTaGTGGCCCCTTCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: MEVKITSWSQTSWVQILACGRHS*WPLQKW
Trigger: CCACTTCTGAAGGGGCCACCAACTGTGTCTGCCGCA...AGCCAGGATTTGAACCCAAGAAGTCTGGCTCCAGCTTGTGATCTTAACCTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CCA 90 bp AGCTTGCATTTTCTAAGCACCCGCTTCCTTTATATCTCCCTCAACCTTCCTACCCTGGAAATCACAGCCTaGGGCGCGGAGGGGATGGTT +
Preference number: 4 (lower is better)
Translates to: SLHFLSTRFLYISLNLPTLEITA*GAEGMV
Trigger: AACCATCCCCTCCGCGCCCCAGGCTGTGATTTCCAG...GGTAGGAAGGTTGAGGGAGATATAAAGGAAGCGGGTGCTTAGAAAATGCAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp TGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTCCTGGAAATCACAGCCTaGGGCGCGGAGGGGATGGTT +
Preference number: 4 (lower is better)
Translates to: WVQILALVYMTSVTLGKFLEITA*GAEGMV
Trigger: AACCATCCCCTCCGCGCCCCAGGCTGTGATTTCCAG...GAACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CCA 90 bp GGAGAATGTCCCTTTGGGAGAGAAGCACGTGTGTTAGGGAAATATGCGGGTGAAACGCCGTTCACAGCCTaGATCTCGAAGGTGTACTGG +
Preference number: 4 (lower is better)
Translates to: GECPFGREARVLGKYAGETPFTA*ISKVYW
Trigger: CCAGTACACCTTCGAGATCCAGGCTGTGAACGGCGT...TTCACCCGCATATTTCCCTAACACACGTGCTTCTCTCCCAAAGGGACATTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp ATGGAGGTTAAGATCACAAGCTGGAGCCAGACTTCTTGGGTTCAAATCCTGGCTGATGGACACTGCCGATaGAGCTGCCTGGTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: MEVKITSWSQTSWVQILADGHCR*SCLVGG
Trigger: ACCACCAACCAGGCAGCTCCATCGGCAGTGTCCATC...AGCCAGGATTTGAACCCAAGAAGTCTGGCTCCAGCTTGTGATCTTAACCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CCA 90 bp AGGGAGTTGGAGAGAAACTGCTTTTGTCTCCGATTGGACACATCGCATGAATCTTTGGGCTGGTCCGGCTaGGACCACGACAGGGTAATG +
Preference number: 4 (lower is better)
Translates to: RELERNCFCLRLDTSHESLGWSG*DHDRVM
Trigger: CATTACCCTGTCGTGGTCCCAGCCGGACCAGCCCAA...AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
CDS-3UTR CCA 90 bp TGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTCTTGGGCTGGTCCGGCTaGGACCACGACAGGGTAATG +
Preference number: 4 (lower is better)
Translates to: WVQILALVYMTSVTLGKFLGWSG*DHDRVM
Trigger: CATTACCCTGTCGTGGTCCCAGCCGGACCAGCCCAA...GAACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CCA 90 bp TCCCTCAACCTTCCTACCAACCCCCAGTTTGTAGGTGAGAAAACGGAGGCTGAGGCTTCTGTCATGGTCTaGAAGTACATCTTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: SLNLPTNPQFVGEKTEAEASVMV*KYILPL
Trigger: CAGCGGCAAGATGTACTTCCAGACCATGACAGAAGC...CTCAGCCTCCGTTTTCTCACCTACAAACTGGGGGTTGGTAGGAAGGTTGAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp CACAGAGAAAACCAGAGTTGGCTGTGCCTGGGGGTACATGAGCACTCTAAGACCTCCTGGATGCTTGTCTaGTACTCGGCTTCTGTCATG +
Preference number: 4 (lower is better)
Translates to: HRENQSWLCLGVHEHSKTSWMLV*YSASVM
Trigger: CATGACAGAAGCCGAGTACCAGACAAGCATCCAGGA...GGTCTTAGAGTGCTCATGTACCCCCAGGCACAGCCAACTCTGGTTTTCTCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GGCATTGGAGTAACAGGGTCAGGGTTGATCTTGGACACAGCTGGTGAGATTTCCGTAGATCTTCATGCCTaGGGTCATGTGGCCACTGGT +
Preference number: 4 (lower is better)
Translates to: GIGVTGSGLILDTAGEISVDLHA*GHVATG
Trigger: ACCAGTGGCCACATGACCCCAGGCATGAAGATCTAC...GGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GCACTCAGGCCATCATCTATTCTGATTGGTCTGCCCGAGTCTTCGCAGTTGATATCACAGGTGTGCTCTTaGTCACGACACCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: ALRPSSILIGLPESSQLISQVCS*SRHPPG
Trigger: ACCTGGAGGGTGTCGTGACCAAGAGCACACCTGTGA...TATCAACTGCGAAGACTCGGGCAGACCAATCAGAATAGATGATGGCCTGAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AAAGTGACCCCAACCCGGAGAATGTCCCTTTGGGAGAGAAGCACGTGTGTTAGGCAACCTCTACCTCCTTaGTTCAAGCAATTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: KVTPTRRMSLWERSTCVRQPLPP*FKQFPC
Trigger: GCAGGGGAATTGCTTGAACCAAGGAGGTAGAGGTTG...CCTAACACACGTGCTTCTCTCCCAAAGGGACATTCTCCGGGTTGGGGTCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp GGAGAATGTCCCTTTGGGAGAGAAGCACGTGTGTTAGGGAAATATGCGGGTGAATCCCCGGGAGGAAGATaGCAAAGCAAGGAGTACTGG +
Preference number: 4 (lower is better)
Translates to: GECPFGREARVLGKYAGESPGGR*QSKEYW
Trigger: CCAGTACTCCTTGCTTTGCCATCTTCCTCCCGGGGA...TTCACCCGCATATTTCCCTAACACACGTGCTTCTCTCCCAAAGGGACATTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp CTAATCCCTTCCTTCCCTTTGCAGCTCAGGCTCCCGGAACAGGTGAGTGACAGATGCGCCCGCATCACCTaGATACTGTTCAGGATTTTT +
Preference number: 4 (lower is better)
Translates to: LIPSFPLQLRLPEQVSDRCARIT*ILFRIF
Trigger: AAAAATCCTGAACAGTATCCAGGTGATGCGGGCGCA...TCTGTCACTCACCTGTTCCGGGAGCCTGAGCTGCAAAGGGAAGGAAGGGATTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTTGCGCCCGCATCACCTaGATACTGTTCAGGATTTTT +
Preference number: 4 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGCARIT*ILFRIF
Trigger: AAAAATCCTGAACAGTATCCAGGTGATGCGGGCGCA...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCGCCTCCGATGCAGCCTaGTTTAGGCTCCCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLASDAA*FRLPEG
Trigger: TCCCTCTGGGAGCCTAAACCAGGCTGCATCGGAGGC...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTCTGCAGACATCAGGGCAGTTTGTTATGGGGGAAGAGTCAAGTGAGGATTTCCGCCAGAAAGGCCACGTaGAGCTGTCGTTCTCCATGT +
Preference number: 4 (lower is better)
Translates to: LCRHQGSLLWGKSQVRISARKAT*SCRSPC
Trigger: ACATGGAGAACGACAGCTCCACGTGGCCTTTCTGGC...GGAAATCCTCACTTGACTCTTCCCCCATAACAAACTGCCCTGATGTCTGCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTCTGCAGACATCAGGGCAGTTTGTTATGGGGGAAGAGTCAAGTGAGGATTTCCCAGACCCGATATCCATaGCACATCCATCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: LCRHQGSLLWGKSQVRISQTRYP*HIHLPA
Trigger: GGCAGGGAGATGGATGTGCCATGGATATCGGGTCTG...GGAAATCCTCACTTGACTCTTCCCCCATAACAAACTGCCCTGATGTCTGCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TCCTTCCTCATGGGACTAAGGTGTATAAGTGTTTTGCACAGCCTGCCTCACCCAGTGAGTGACAGACGATaGGCTGTGCTGTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: SFLMGLRCISVLHSLPHPVSDRR*AVLCWM
Trigger: CATCCAGCACAGCACAGCCCATCGTCTGTCACTCAC...TGGGTGAGGCAGGCTGTGCAAAACACTTATACACCTTAGTCCCATGAGGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TTTTTCTTAATCCCTGTCTACAGCAGACCCTCTCTCTGCAGACATCAGGGCAGTGTAGCACCTGTGCTCTaGGAAGCAGGTTTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: FFLIPVYSRPSLCRHQGSVAPVL*EAGLQG
Trigger: CCCCTGCAAACCTGCTTCCCAGAGCACAGGTGCTAC...ACTGCCCTGATGTCTGCAGAGAGAGGGTCTGCTGTAGACAGGGATTAAGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCAAACAACAGGGGCCCTaGAGTGAGCCAGGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLKQQGP*SEPGVA
Trigger: GGCCACTCCTGGCTCACTCCAGGGCCCCTGTTGTTT...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGGAGTGTGTTGGACCATTCTaGCAGCTGCGTCTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: CNSATLPGKDVLHPTQKECVGPF*QLRLGV
Trigger: CACTCCAAGACGCAGCTGCCAGAATGGTCCAACACA...CTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGAAGCCTGGAGGAAATaGGGTAGACATCAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPEAWRK*GRHQPN
Trigger: ATTTGGCTGATGTCTACCCCATTTCCTCCAGGCTTC...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CCA 90 bp CTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTTTGGAAGCCTGGAGGAAATaGGGTAGACATCAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: LRVSSTPYFMGPNLRLGLEAWRK*GRHQPN
Trigger: ATTTGGCTGATGTCTACCCCATTTCCTCCAGGCTTC...CAAACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TCCTTCCTCATGGGACTAAGGTGTATAAGTGTTTTGCACAGCCTGCCTCACCCACATCACACAGCACAGTaGGGCTCCCTCAACTTCCCT +
Preference number: 4 (lower is better)
Translates to: SFLMGLRCISVLHSLPHPHHTAQ*GSLNFP
Trigger: AGGGAAGTTGAGGGAGCCCCACTGTGCTGTGTGATG...TGGGTGAGGCAGGCTGTGCAAAACACTTATACACCTTAGTCCCATGAGGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GGAGACATTGGAAACAGAAAAATCCAAAGCTCATGGCCTTGCTCTGCTCCTTCCCATTTTGCAGAAGGCTaGGTCAAGGCCACCCGGTGG +
Preference number: 4 (lower is better)
Translates to: GDIGNRKIQSSWPCSAPSHFAEG*VKATRW
Trigger: CCACCGGGTGGCCTTGACCCAGCCTTCTGCAAAATG...GGAAGGAGCAGAGCAAGGCCATGAGCTTTGGATTTTTCTGTTTCCAATGTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTAATCCCTTCCTTCCCTTTGCAGCTCAGGCTCCCGGAACAGGTGAGTGACAGACTGGTTGGAATCTTCTaGGAATCACCTCTGGGAATC +
Preference number: 4 (lower is better)
Translates to: LIPSFPLQLRLPEQVSDRLVGIF*ESPLGI
Trigger: GATTCCCAGAGGTGATTCCCAGAAGATTCCAACCAG...TCTGTCACTCACCTGTTCCGGGAGCCTGAGCTGCAAAGGGAAGGAAGGGATTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GCCAGGAAAGGATTAGTAACCAGGCAGCGGGTGGCTCAGAGCTGTGTGCCTGGGGGAATCTTTCACCTGTaGAACGTTAGAATTCATGAC +
Preference number: 4 (lower is better)
Translates to: ARKGLVTRQRVAQSCVPGGIFHL*NVRIHD
Trigger: GTCATGAATTCTAACGTTCCACAGGTGAAAGATTCC...CCCAGGCACACAGCTCTGAGCCACCCGCTGCCTGGTTACTAATCCTTTCCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GGCATTGGAGTAACAGGGTCAGGGTTGATCTTGGACACAGCTGGTGAGATTTCCCAAAAGGAGGGTCTTTaGCCCTTGCCAAGGTGCATC +
Preference number: 4 (lower is better)
Translates to: GIGVTGSGLILDTAGEISQKEGL*PLPRCI
Trigger: GATGCACCTTGGCAAGGGCCAAAGACCCTCCTTTTG...GGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGGAAGGGCTGCTTAGAAGAGCAACCCTTAGCACCTGGGTCACGTGCATCCCAAAAGGCTGTGTGGCCATaGAAGCTATGTCCCAAATGT +
Preference number: 4 (lower is better)
Translates to: RKGCLEEQPLAPGSRASQKAVWP*KLCPKC
Trigger: ACATTTGGGACATAGCTTCCATGGCCACACAGCCTT...TTGGGATGCACGTGACCCAGGTGCTAAGGGTTGCTCTTCTAAGCAGCCCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AGCTTGCATTTTCTAAGCACCCGCTTCCTTTATATCTCCCTCAACCTTCCTACCCACCTCTTCCCACCCTaGTGGAGGATGCACCATCCA +
Preference number: 4 (lower is better)
Translates to: SLHFLSTRFLYISLNLPTHLFPP*WRMHHP
Trigger: TGGATGGTGCATCCTCCATCAGGGTGGGAAGAGGTG...GGTAGGAAGGTTGAGGGAGATATAAAGGAAGCGGGTGCTTAGAAAATGCAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR TCA 90 bp CACAGAGAAAACCAGAGTTGGCTGTGCCTGGGGGTACATGAGCACTCTAAGACCCGTTACAGTAGAGCTTaGTGGGTACATCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: HRENQSWLCLGVHEHSKTRYSRA*WVHPPL
Trigger: AAGAGGTGGATGTACCCATCAAGCTCTACTGTAACG...GGTCTTAGAGTGCTCATGTACCCCCAGGCACAGCCAACTCTGGTTTTCTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AGCCAGACTTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCAAGTGGTCCGGCTGTTaGTGGGACAGTGGGTACAGG +
Preference number: 4 (lower is better)
Translates to: SQTSWVQILALVYMTSVTKWSGC*WDSGYR
Trigger: CCTGTACCCACTGTCCCATCAACAGCCGGACCACTT...GGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAAGTCTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR TCA 90 bp TTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTTTCACAGAGGCGAACTaGGGCGAGAAGGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LGSNPGSSIYDLCDLGQVFTEAN*GEKGLW
Trigger: CCAGAGCCCCTTCTCGCCTCAGTTCGCCTCTGTGAA...AACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR TCA 90 bp TGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTCGGCTCACCTGATGCATaGTGGACACTGCCGATGGAG +
Preference number: 4 (lower is better)
Translates to: WVQILALVYMTSVTLGKFGSPDA*WTLPME
Trigger: CTCCATCGGCAGTGTCCATCATGCATCAGGTGAGCC...GAACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR TCA 90 bp CTCTGCAGACATCAGGGCAGTTTGTTATGGGGGAAGAGTCAAGTGAGGATTTCCTCAGCTGATGCCATCTaGGTAAGAGGCACTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LCRHQGSLLWGKSQVRISSADAI*VRGTAG
Trigger: ACCAGCAGTGCCTCTTACTCAGATGGCATCAGCTGA...GGAAATCCTCACTTGACTCTTCCCCCATAACAAACTGCCCTGATGTCTGCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CTCTGCAGACATCAGGGCAGTTTGTTATGGGGGAAGAGTCAAGTGAGGATTTCCCTTCCTGTGCTTCAGTaGGGCAGGAGGATTAACTGG +
Preference number: 4 (lower is better)
Translates to: LCRHQGSLLWGKSQVRISLPVLQ*GRRINW
Trigger: CCAGTTAATCCTCCTGCCTCACTGAAGCACAGGAAG...GGAAATCCTCACTTGACTCTTCCCCCATAACAAACTGCCCTGATGTCTGCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp ACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCGTCAATTTTGGGGGCTGGGCATaGCCAAGTGGTAATTACTCT +
Preference number: 4 (lower is better)
Translates to: TMTAHLTLRPSSECTLVNFGGWA*PSGNYS
Trigger: AGAGTAATTACCACTTGGTCATGCCCAGCCCCCAAA...ATTGACGAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCTGGCCCTCCACAGACTaGATCTGGTTCATCTGCGCC +
Preference number: 4 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLWPSTD*IWFICA
Trigger: GGCGCAGATGAACCAGATTCAGTCTGTGGAGGGCCA...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400191.7
CDS-3UTR GCA 90 bp AAAATCCAGAAATGTGCATATAAAATCTCGCCCTTGGTGTATTGCCTAAGTCAGTCATCTCCACGTGGATaGGGTGGGCGCCACGGCGCC +
Preference number: 4 (lower is better)
Translates to: KIQKCAYKISPLVYCLSQSSPRG*GGRHGA
Trigger: GGCGCCGTGGCGCCCACCGCATCCACGTGGAGATGA...CTGACTTAGGCAATACACCAAGGGCGAGATTTTATATGCACATTTCTGGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGCACGCTGGGGATGCTaGTGCAGTCACGCACCGAAA +
Preference number: 4 (lower is better)
Translates to: FLGSNPGSSIYDLCDLGQARWGC*CSHAPK
Trigger: TTTCGGTGCGTGACTGCAGCAGCATCCCCAGCGTGC...TTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR GCA 90 bp TTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAACCTCGAAGCCTGCTTTaGACATGCAGCGCCCGATGG +
Preference number: 4 (lower is better)
Translates to: FLGSNPGSSIYDLCDLGQPRSLL*TCSARW
Trigger: CCATCGGGCGCTGCATGTGCAAAGCAGGCTTCGAGG...TTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR GCA 90 bp AGCCAGACTTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCAACCTCGGCAGACGGTaGCATTCTCAACGGCCTCGA +
Preference number: 4 (lower is better)
Translates to: SQTSWVQILALVYMTSVTNLGRR*HSQRPR
Trigger: TCGAGGCCGTTGAGAATGGCACCGTCTGCCGAGGTT...GGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAAGTCTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR GCA 90 bp GACTTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAGGGGGTCCAGGTCTaGTCTGTAGTAGCCATTGCG +
Preference number: 4 (lower is better)
Translates to: DFLGSNPGSSIYDLCDLGQGVQV*SVVAIA
Trigger: CGCAATGGCTACTACAGAGCAGACCTGGACCCCCTG...CCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR GCA 90 bp ATGGAGGTTAAGATCACAAGCTGGAGCCAGACTTCTTGGGTTCAAATCCTGGCTCACTGCCGATGGAGCTaGCTGGTTGGTGGTGATGTT +
Preference number: 4 (lower is better)
Translates to: MEVKITSWSQTSWVQILAHCRWS*LVGGDV
Trigger: AACATCACCACCAACCAGGCAGCTCCATCGGCAGTG...AGCCAGGATTTGAACCCAAGAAGTCTGGCTCCAGCTTGTGATCTTAACCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR GCA 90 bp TGCCAAGGTGCATCTGTAACTCAGATCCAAGGGATGGAGCTTTTCTTAGTATCTACCTGCCACGGTGCGTaGCCGCACCTGGAAGACATA +
Preference number: 4 (lower is better)
Translates to: CQGASVTQIQGMELFLVSTCHGA*PHLEDI
Trigger: TATGTCTTCCAGGTGCGGGCACGCACCGTGGCAGGT...AGATACTAAGAAAAGCTCCATCCCTTGGATCTGAGTTACAGATGCACCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CACAGGCACCTCTGCCGTGTGGCCTCCCAGCTCTGGAAGGCAGTGACTAAGATTCGCAAGAACAGTCATTaGTTTCCTTATGAGAATCCT +
Preference number: 4 (lower is better)
Translates to: HRHLCRVASQLWKAVTKIRKNSH*FPYENP
Trigger: AGGATTCTCATAAGGAAAGCAATGACTGTTCTTGCG...AATCTTAGTCACTGCCTTCCAGAGCTGGGAGGCCACACGGCAGAGGTGCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTCGCAAGAACAGTCATTaGTTTCCTTATGAGAATCCT +
Preference number: 4 (lower is better)
Translates to: ESSGLHSSGWGRHFRRRSRKNSH*FPYENP
Trigger: AGGATTCTCATAAGGAAAGCAATGACTGTTCTTGCG...ACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTAAAAATTCTTCTGTTTaGCCAGTGGTGGCAGGAATA +
Preference number: 4 (lower is better)
Translates to: VSLSAPSGGQGITVNDPGKNSSV*PVVAGI
Trigger: TATTCCTGCCACCACTGGGCAAACAGAAGAATTTTT...ACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TCTGCTACTTATGTACCTGCAGGGGCTCACCCTGATTCCCAGGGCATCGAAGGCAATTCACTAACTGATTaGTCTGCTTGGGTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: SATYVPAGAHPDSQGIEGNSLTD*SAWVSV
Trigger: CACAGACACCCAAGCAGAGCAATCAGTTAGTGAATT...GCCTTCGATGCCCTGGGAATCAGGGTGAGCCCCTGCAGGTACATAAGTAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TGCCAAGGTGCATCTGTAACTCAGATCCAAGGGATGGAGCTTTTCTTAGTATCTGAAGGTGACCTTGTGTaGCGAGACAGCTGCCACCCG +
Preference number: 4 (lower is better)
Translates to: CQGASVTQIQGMELFLVSEGDLV*RDSCHP
Trigger: CGGGTGGCAGCTGTCTCGGCACACAAGGTCACCTTC...AGATACTAAGAAAAGCTCCATCCCTTGGATCTGAGTTACAGATGCACCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTTTGCTGAGTAAGAGGCACTaGTGGTTAGTAAACAGCCAT +
Preference number: 4 (lower is better)
Translates to: LRVSSTPYFMGPNLRLGLLSKRH*WLVNSH
Trigger: ATGGCTGTTTACTAACCAGCAGTGCCTCTTACTCAG...CAAACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CAGCTGGTGAGATTTCCTTGGTCACAGCAGTGGGGTCCGGAGGAGCCAGGTCTGACCCTGTCTTTTGAATaGATTTACGTTATCTTCCCT +
Preference number: 4 (lower is better)
Translates to: QLVRFPWSQQWGPEEPGLTLSFE*IYVIFP
Trigger: AGGGAAGATAACGTAAATGCATTCAAAAGACAGGGT...CAGACCTGGCTCCTCCGGACCCCACTGCTGTGACCAAGGAAATCTCACCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TCCTTCCTCATGGGACTAAGGTGTATAAGTGTTTTGCACAGCCTGCCTCACCCAACTATGCTACCCTCCTaGTCAAGAACCTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SFLMGLRCISVLHSLPHPTMLPS*SRTCCG
Trigger: GCCACAGCAGGTTCTTGAGCAGGAGGGTAGCATAGT...TGGGTGAGGCAGGCTGTGCAAAACACTTATACACCTTAGTCCCATGAGGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GGCATTGGAGTAACAGGGTCAGGGTTGATCTTGGACACAGCTGGTGAGATTTCCGGCCAAGTCCTTTTCTaGAGCCAACACTCTGACCTT +
Preference number: 4 (lower is better)
Translates to: GIGVTGSGLILDTAGEISGQVLF*SQHSDL
Trigger: AAGGTCAGAGTGTTGGCTGCAGAAAAGGACTTGGCC...GGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GCACTCAGGCCATCATCTATTCTGATTGGTCTGCCCGAGTCTTCGCAGTTGATATCATGGGTCCTAATCTaGGTCTGGGTTTGGGCATCC +
Preference number: 4 (lower is better)
Translates to: ALRPSSILIGLPESSQLISWVLI*VWVWAS
Trigger: GGATGCCCAAACCCAGACGCAGATTAGGACCCATGA...TATCAACTGCGAAGACTCGGGCAGACCAATCAGAATAGATGATGGCCTGAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGGAGTGGCCCTTGCCAAGGTaGATCTGTAACTCAGATCCA +
Preference number: 4 (lower is better)
Translates to: CNSATLPGKDVLHPTQKEWPLPR*ICNSDP
Trigger: TGGATCTGAGTTACAGATGCACCTTGGCAAGGGCCA...CTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp ATGGAGGTTAAGATCACAAGCTGGAGCCAGACTTCTTGGGTTCAAATCCTGGCTGATTCTCCATCCAGTTaGGGAAGGTCTTGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: MEVKITSWSQTSWVQILADSPSS*GRSWWP
Trigger: CGGCCACCAAGACCTTCCCCAACTGGATGGAGAATC...AGCCAGGATTTGAACCCAAGAAGTCTGGCTCCAGCTTGTGATCTTAACCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CCA 90 bp ATGGAGGTTAAGATCACAAGCTGGAGCCAGACTTCTTGGGTTCAAATCCTGGCTAAGATGGCGCCATTCTaGATGATGCGGGGGCACTTG +
Preference number: 4 (lower is better)
Translates to: MEVKITSWSQTSWVQILAKMAPF*MMRGHL
Trigger: CAAGTGCCCCCGCATCATCCAGAATGGCGCCATCTT...AGCCAGGATTTGAACCCAAGAAGTCTGGCTCCAGCTTGTGATCTTAACCTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CCA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCGGCGAGAAGGGGCTCTaGTCAGTAACGCCGTTCACA +
Preference number: 4 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLGEKGL*SVTPFT
Trigger: TGTGAACGGCGTTACTGACCAGAGCCCCTTCTCGCC...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GAGCCAGACTTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACGGCGAGAAGGGGCTCTaGTCAGTAACGCCGTTCACA +
Preference number: 4 (lower is better)
Translates to: EPDFLGSNPGSSIYDLCDGEKGL*SVTPFT
Trigger: TGTGAACGGCGTTACTGACCAGAGCCCCTTCTCGCC...GTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAAGTCTGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CCA 90 bp TCCCTCAACCTTCCTACCAACCCCCAGTTTGTAGGTGAGAAAACGGAGGCTGAGTGCGCCCGCATCACCTaGATACTGTTCAGGATTTTT +
Preference number: 4 (lower is better)
Translates to: SLNLPTNPQFVGEKTEAECARIT*ILFRIF
Trigger: AAAAATCCTGAACAGTATCCAGGTGATGCGGGCGCA...CTCAGCCTCCGTTTTCTCACCTACAAACTGGGGGTTGGTAGGAAGGTTGAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp TCCTTCCTCATGGGACTAAGGTGTATAAGTGTTTTGCACAGCCTGCCTCACCCAAGTGTTTCTTGGCTCTaGCCAGGTCACCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SFLMGLRCISVLHSLPHPSVSWL*PGHLPR
Trigger: TCTGGGAAGGTGACCTGGCCAGAGCCAAGAAACACT...TGGGTGAGGCAGGCTGTGCAAAACACTTATACACCTTAGTCCCATGAGGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGGGAGTTGGAGAGAAACTGCTTTTGTCTCCGATTGGACACATCGCATGAATCTCGCGTGATATGTACCTaGAGCTGCAGACCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: RELERNCFCLRLDTSHESRVICT*SCRPGG
Trigger: ACCCCCAGGTCTGCAGCTCCAGGTACATATCACGCG...AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GGAGACATTGGAAACAGAAAAATCCAAAGCTCATGGCCTTGCTCTGCTCCTTCCTCAACAGTCCTGGAGTaGGAAGCTCCTCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: GDIGNRKIQSSWPCSAPSSTVLE*EAPPPW
Trigger: CCAAGGTGGAGGAGCTTCCCACTCCAGGACTGTTGA...GGAAGGAGCAGAGCAAGGCCATGAGCTTTGGATTTTTCTGTTTCCAATGTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTTTGATCATCTATTCTGATTaGTCTGCCCGAGTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: LRVSSTPYFMGPNLRLGLIIYSD*SARVFA
Trigger: TGCGAAGACTCGGGCAGACCAATCAGAATAGATGAT...CAAACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TTCTCCACCTTAAGTTTGATGGCAGAAGCCATTTTGCAGAAGGCTGGGTCAAGGGTCAAGGCCACCCGGTaGTGTATTCGCATGCGTATG +
Preference number: 4 (lower is better)
Translates to: FSTLSLMAEAILQKAGSRVKATR*CIRMRM
Trigger: CATACGCATGCGAATACACCACCGGGTGGCCTTGAC...CCTTGACCCAGCCTTCTGCAAAATGGCTTCTGCCATCAAACTTAAGGTGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCCATTTTGCAGAAGGCTaGGTCAAGGCCACCCGGTGG +
Preference number: 4 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLHFAEG*VKATRW
Trigger: CCACCGGGTGGCCTTGACCCAGCCTTCTGCAAAATG...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGTTGTGTATAAAAAGTTaGGCACGGTGCCTGGCACAT +
Preference number: 4 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGLCIKS*ARCLAH
Trigger: ATGTGCCAGGCACCGTGCCCAACTTTTTATACACAA...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TTCTCCACCTTAAGTTTGATGGCAGAAGCCATTTTGCAGAAGGCTGGGTCAAGGCTGCATAGCTCAGGCTaGGGCAGACACTTCAGGAGA +
Preference number: 4 (lower is better)
Translates to: FSTLSLMAEAILQKAGSRLHSSG*GRHFRR
Trigger: TCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAG...CCTTGACCCAGCCTTCTGCAAAATGGCTTCTGCCATCAAACTTAAGGTGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CAA 72 bp GAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTaGGAATCTTCTGGGAATCACCTCTGGGAATCAGTT +
Preference number: 4 (lower is better)
Translates to: EVGRKDYRQMAW*ESSGNHLWESV
Trigger: AACTGATTCCCAGAGGTGATTCCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAACACCTCTTCCCACCCTaGTGGAGGATGCACCATCCA +
Preference number: 4 (lower is better)
Translates to: FLGSNPGSSIYDLCDLGQHLFPP*WRMHHP
Trigger: TGGATGGTGCATCCTCCATCAGGGTGGGAAGAGGTG...TTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR TCA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAACCAGTTGTTCTGGCTTaGCTCAAACACGTTGCACAC +
Preference number: 4 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKPVVLA*LKHVAH
Trigger: GTGTGCAACGTGTTTGAGTCAAGCCAGAACAACTGG...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GACTTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCCCCTTGGTTGGCCTTaGAAGTCCCAGATGGACAAC +
Preference number: 4 (lower is better)
Translates to: DFLGSNPGSSIYDLCDLGPLGWP*KSQMDN
Trigger: GTTGTCCATCTGGGACTTTCAAGGCCAACCAAGGGG...CCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR TCA 90 bp TTGGTCCCTGCTTCCCTATTGGGACATGATCTATTCCTCACCCTCCAGATCACCTACTCCATCATCATCTaGGACACGACGTCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: LVPASLLGHDLFLTLQITYSIII*DTTSKE
Trigger: CTCCTTTGACGTCGTGTCTCAGATGATGATGGAGTA...GGTGATCTGGAGGGTGAGGAATAGATCATGTCCCAATAGGGAAGCAGGGACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR TCA 90 bp AGCTTGCATTTTCTAAGCACCCGCTTCCTTTATATCTCCCTCAACCTTCCTACCAGGTGGAAGAGCACTTaGGTCGGAATCAGGGTCCCT +
Preference number: 4 (lower is better)
Translates to: SLHFLSTRFLYISLNLPTRWKST*VGIRVP
Trigger: AGGGACCCTGATTCCGACTCAAGTGCTCTTCCACCT...GGTAGGAAGGTTGAGGGAGATATAAAGGAAGCGGGTGCTTAGAAAATGCAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR TCA 90 bp AGCTTGCATTTTCTAAGCACCCGCTTCCTTTATATCTCCCTCAACCTTCCTACCGGAGCGACTATGGTGTaGGGTGGAAGAGCACTTGAG +
Preference number: 4 (lower is better)
Translates to: SLHFLSTRFLYISLNLPTGATMV*GGRALE
Trigger: CTCAAGTGCTCTTCCACCTCACACCATAGTCGCTCC...GGTAGGAAGGTTGAGGGAGATATAAAGGAAGCGGGTGCTTAGAAAATGCAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR TCA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAATCCTCCATCATCATCTaGGACACGACGTCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKSSIII*DTTSKE
Trigger: CTCCTTTGACGTCGTGTCTCAGATGATGATGGAGGA...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGATTCAATTCACTAACTaGTTGCTCTGCTTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGIQFTN*LLCLGV
Trigger: GACACCCAAGCAGAGCAATCAGTTAGTGAATTGAAT...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTATTGGAATCTTAGAATaGTGGGGTTTTGCAATCCTA +
Preference number: 4 (lower is better)
Translates to: ESSGLHSSGWGRHFRRRSIGILE*WGFAIL
Trigger: TAGGATTGCAAAACCCCATCATTCTAAGATTCCAAT...ACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GGAAACAGGGTTCTGGGAAACCCTGCCAGACAGCCCCATACCCTGGTTGAGAGCAACAGCAACGAACAATaGGACTCGAAATTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: GNRVLGNPARQPHTLVESNSNEQ*DSKFQE
Trigger: TTCTTGAAATTTCGAGTCTCATTGTTCGTTGCTGTT...GCTCTCAACCAGGGTATGGGGCTGTCTGGCAGGGTTTCCCAGAACCCTGTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTCGCTGGGGATGCTGCTaGAGTCACGCACCGAAAACT +
Preference number: 4 (lower is better)
Translates to: LGSNPGSSIYDLCDLGQVRWGCC*SHAPKT
Trigger: AGTTTTCGGTGCGTGACTGCAGCAGCATCCCCAGCG...AACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR GCA 90 bp ATGGAGGTTAAGATCACAAGCTGGAGCCAGACTTCTTGGGTTCAAATCCTGGCTCTCTGTAGTAGCCATTaGGGCAGACACAGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: MEVKITSWSQTSWVQILALCSSH*GRHSWW
Trigger: CCACCAACTGTGTCTGCCGCAATGGCTACTACAGAG...AGCCAGGATTTGAACCCAAGAAGTCTGGCTCCAGCTTGTGATCTTAACCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR GCA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGCAACTTCTCCTGGATaGTTGTCTGGTACTCGGCTT +
Preference number: 4 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKATSPG*LSGTRL
Trigger: AAGCCGAGTACCAGACAAGCATCCAGGAGAAGTTGC...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGGCACCTGGCTCTGGAGTTTGCAGCAACACCCTGTGGTTGTCCAGTGTTAAGAGAGTTGGAGAGAAACTaGTTTTGTCTCCGATTGGAC +
Preference number: 4 (lower is better)
Translates to: RHLALEFAATPCGCPVLRELERN*FCLRLD
Trigger: GTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTC...TCTTAACACTGGACAACCACAGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCAATTCACTAACTGATTaGTCTGCTTGGGTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPNSLTD*SAWVSV
Trigger: CACAGACACCCAAGCAGAGCAATCAGTTAGTGAATT...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR GCA 90 bp AGGCACCTGGCTCTGGAGTTTGCAGCAACACCCTGTGGTTGTCCAGTGTTAAGACTCTCGTCAATTCTCTaGTACTTATGTACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RHLALEFAATPCGCPVLRLSSIL*YLCTCR
Trigger: CCTGCAGGTACATAAGTAGCAGAGAATTGACGAGAG...TCTTAACACTGGACAACCACAGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGGGAGTTGGAGAGAAACTGCTTTTGTCTCCGATTGGACACATCGCATGAATCTCAAAGCTCATGGCCTTaGTCTGCTCCTTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RELERNCFCLRLDTSHESQSSWP*SAPSWL
Trigger: CAGCCAGGAAGGAGCAGAGCAAGGCCATGAGCTTTG...AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp CCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGACATCACGCCTAAACTaGCTCAACCTCCACTTATAT +
Preference number: 4 (lower is better)
Translates to: PSFELHVFLVTSRGWHRLTSRLN*LNLHLY
Trigger: ATATAAGTGGAGGTTGAGGCAGTTTAGGCGTGATGT...CAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR GCA 90 bp CTAATCCCTTCCTTCCCTTTGCAGCTCAGGCTCCCGGAACAGGTGAGTGACAGAGTATTCAGCGATTATTaGAATCCCTGTGGTTCCAAC +
Preference number: 4 (lower is better)
Translates to: LIPSFPLQLRLPEQVSDRVFSDY*NPCGSN
Trigger: GTTGGAACCACAGGGATTGCAATAATCGCTGAATAC...TCTGTCACTCACCTGTTCCGGGAGCCTGAGCTGCAAAGGGAAGGAAGGGATTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TCCTTCCTCATGGGACTAAGGTGTATAAGTGTTTTGCACAGCCTGCCTCACCCAAGGGTCTTTGGCCCTTaGCAAGGTGCATCTGTAACT +
Preference number: 4 (lower is better)
Translates to: SFLMGLRCISVLHSLPHPRVFGP*QGASVT
Trigger: AGTTACAGATGCACCTTGGCAAGGGCCAAAGACCCT...TGGGTGAGGCAGGCTGTGCAAAACACTTATACACCTTAGTCCCATGAGGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TTCTCCACCTTAAGTTTGATGGCAGAAGCCATTTTGCAGAAGGCTGGGTCAAGGCGGTGCCTGGCACATTaGTGGCACTCAAGAAATAGC +
Preference number: 4 (lower is better)
Translates to: FSTLSLMAEAILQKAGSRRCLAH*WHSRNS
Trigger: GCTATTTCTTGAGTGCCAGCAATGTGCCAGGCACCG...CCTTGACCCAGCCTTCTGCAAAATGGCTTCTGCCATCAAACTTAAGGTGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp ATGGAGGTTAAGATCACAAGCTGGAGCCAGACTTCTTGGGTTCAAATCCTGGCTAGTTGGGGAAGGTCTTaGTGGCCGAGTCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: MEVKITSWSQTSWVQILASWGRS*WPSQSQ
Trigger: CTGACTTTGACTCGGCCACCAAGACCTTCCCCAACT...AGCCAGGATTTGAACCCAAGAAGTCTGGCTCCAGCTTGTGATCTTAACCTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CCA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAATCCACCTTCACCCATaGATTCTCCATCCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKIHLHP*ILHPVG
Trigger: CCCAACTGGATGGAGAATCCATGGGTGAAGGTGGAT...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTCCCGACAGGGTTTCCTaGAAGATGGCGCCATTCTGG +
Preference number: 4 (lower is better)
Translates to: LGSNPGSSIYDLCDLGQVPDRVS*KMAPFW
Trigger: CCAGAATGGCGCCATCTTCCAGGAAACCCTGTCGGG...AACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CCA 90 bp AGCCAGACTTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCCAGGCCTCATCCCCTTaGTTGGCCTTGAAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SQTSWVQILALVYMTSVTQASSP*LALKVP
Trigger: TGGGACTTTCAAGGCCAACCAAGGGGATGAGGCCTG...GGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAAGTCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CCA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCCTGTTGATGGGACAGTaGGTACAGGCCTCATCCCCT +
Preference number: 4 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLLLMGQ*VQASSP
Trigger: AGGGGATGAGGCCTGTACCCACTGTCCCATCAACAG...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTCCTGTTGATGGGACAGTaGGTACAGGCCTCATCCCCT +
Preference number: 4 (lower is better)
Translates to: WVQILALVYMTSVTLGKFLLMGQ*VQASSP
Trigger: AGGGGATGAGGCCTGTACCCACTGTCCCATCAACAG...GAACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CCA 90 bp TTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTGGCAGACACAGTTGGTaGCCCCTTCAGAAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: LGSNPGSSIYDLCDLGQVGRHSW*PLQKWS
Trigger: GGACCACTTCTGAAGGGGCCACCAACTGTGTCTGCC...AACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CCA 90 bp TTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTTCGGTCAGGCCTAGCTaGCGTGGTGCGTACTGTACA +
Preference number: 4 (lower is better)
Translates to: LGSNPGSSIYDLCDLGQVSVRPS*RGAYCT
Trigger: TGTACAGTACGCACCACGCCAGCTAGGCCTGACCGA...AACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CCA 90 bp AGGGAGTTGGAGAGAAACTGCTTTTGTCTCCGATTGGACACATCGCATGAATCTAAGGTGTACTGGGTGTaGGCCAGCAGGTCACTGATG +
Preference number: 4 (lower is better)
Translates to: RELERNCFCLRLDTSHESKVYWV*ASRSLM
Trigger: CATCAGTGACCTGCTGGCCCACACCCAGTACACCTT...AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
CDS-3UTR CCA 90 bp TGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTCACGCCGTTCACAGCCTaGATCTCGAAGGTGTACTGG +
Preference number: 4 (lower is better)
Translates to: WVQILALVYMTSVTLGKFTPFTA*ISKVYW
Trigger: CCAGTACACCTTCGAGATCCAGGCTGTGAACGGCGT...GAACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CCA 90 bp TGCCAAGGTGCATCTGTAACTCAGATCCAAGGGATGGAGCTTTTCTTAGTATCTACTCCAGTCTCTGAATaGCCCAGATGGCCCCATGGC +
Preference number: 4 (lower is better)
Translates to: CQGASVTQIQGMELFLVSTPVSE*PRWPHG
Trigger: GCCATGGGGCCATCTGGGCCATTCAGAGACTGGAGT...AGATACTAAGAAAAGCTCCATCCCTTGGATCTGAGTTACAGATGCACCTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGGAGACTGATTGCTCTGCTTaGGTGTCTGTGTTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: CNSATLPGKDVLHPTQKETDCSA*VSVLVH
Trigger: GTGAACCAACACAGACACCCAAGCAGAGCAATCAGT...CTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCAGCGGGTGGTGTAAGTaGAAGGCGCTTGGCAACATG +
Preference number: 4 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLSGWCK*KALGNM
Trigger: CATGTTGCCAAGCGCCTTCCACTTACACCACCCGCT...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGGGAGTTGGAGAGAAACTGCTTTTGTCTCCGATTGGACACATCGCATGAATCTAGCGGGTGGTGTAAGTaGAAGGCGCTTGGCAACATG +
Preference number: 4 (lower is better)
Translates to: RELERNCFCLRLDTSHESSGWCK*KALGNM
Trigger: CATGTTGCCAAGCGCCTTCCACTTACACCACCCGCT...AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAAACAATGACCCATTCTaGGGGCTTCGTAGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKNNDPF*GLRSSR
Trigger: CCTACTGCTACGAAGCCCCCAGAATGGGTCATTGTT...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TGCCAAGGTGCATCTGTAACTCAGATCCAAGGGATGGAGCTTTTCTTAGTATCTAGAGAAGCCCCTAGATaGTGGCAGGGTGGGGACCAA +
Preference number: 4 (lower is better)
Translates to: CQGASVTQIQGMELFLVSREAPR*WQGGDQ
Trigger: TTGGTCCCCACCCTGCCACCATCTAGGGGCTTCTCT...AGATACTAAGAAAAGCTCCATCCCTTGGATCTGAGTTACAGATGCACCTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCCAGGCTCAGCTCCTTTaGTGTCTGGCAGCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLQAQLL*CLAAFS
Trigger: GGAGAAAGCTGCCAGACACCAAAGGAGCTGAGCCTG...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GGCATTGGAGTAACAGGGTCAGGGTTGATCTTGGACACAGCTGGTGAGATTTCCCTGGTTGGAATCTTCTaGGAATCACCTCTGGGAATC +
Preference number: 4 (lower is better)
Translates to: GIGVTGSGLILDTAGEISLVGIF*ESPLGI
Trigger: GATTCCCAGAGGTGATTCCCAGAAGATTCCAACCAG...GGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGGAGGCTATGATTATGATTTaGGGGCTGGGCATGACCAAG +
Preference number: 4 (lower is better)
Translates to: CNSATLPGKDVLHPTQKEAMIMI*GLGMTK
Trigger: CTTGGTCATGCCCAGCCCCCAAATCATAATCATAGC...CTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCCAGGAAACAGGGTTCTaGGAAACCCTGCCAGACAGC +
Preference number: 4 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLQETGF*ETLPDS
Trigger: GCTGTCTGGCAGGGTTTCCCAGAACCCTGTTTCCTG...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CAA 72 bp TACAGCAGACCCTCTCTCTGCAGACATCAGGGCAGTTaGTTATGGGGGAAGAGTCAAGTGAGGATTTCCATG +
Preference number: 4 (lower is better)
Translates to: YSRPSLCRHQGS*LWGKSQVRISM
Trigger: CATGGAAATCCTCACTTGACTCTTCCCCCATAACAAACTGCCCTGATGTCTGCAGAGAGAGGGTCTGCTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CAA 72 bp GGTGTGAGGATTAGGCAAGACATTGTGTATAAAAAGTaGGGCACGGTGCCTGGCACATTGCTGGCACTCAAG +
Preference number: 4 (lower is better)
Translates to: GVRIRQDIVYKK*GTVPGTLLALK
Trigger: CTTGAGTGCCAGCAATGTGCCAGGCACCGTGCCCAACTTTTTATACACAATGTCTTGCCTAATCCTCACACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AAAATCCAGAAATGTGCATATAAAATCTCGCCCTTGGTGTATTGCCTAAGTCAGTGGCGCCATTCTGGATaGTGCGGGGGCACTTGCGGT +
Preference number: 4 (lower is better)
Translates to: KIQKCAYKISPLVYCLSQWRHSG*CGGTCG
Trigger: ACCGCAAGTGCCCCCGCATCATCCAGAATGGCGCCA...CTGACTTAGGCAATACACCAAGGGCGAGATTTTATATGCACATTTCTGGATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAACTGCCTGGTTGGTGGTaGTGTTCACAGAGGCGAACT +
Preference number: 4 (lower is better)
Translates to: FLGSNPGSSIYDLCDLGQLPGWW*CSQRRT
Trigger: AGTTCGCCTCTGTGAACATCACCACCAACCAGGCAG...TTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR TCA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAATGGCGTTGTACTCACTaGGCTCCTTCTCATAGTACT +
Preference number: 4 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKWRCTH*APSHST
Trigger: AGTACTATGAGAAGGAGCTCAGTGAGTACAACGCCA...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GGAGACATTGGAAACAGAAAAATCCAAAGCTCATGGCCTTGCTCTGCTCCTTCCTCCTCCATCATCATCTaGGACACGACGTCAAAGGAG +
Preference number: 4 (lower is better)
Translates to: GDIGNRKIQSSWPCSAPSSSIII*DTTSKE
Trigger: CTCCTTTGACGTCGTGTCTCAGATGATGATGGAGGA...GGAAGGAGCAGAGCAAGGCCATGAGCTTTGGATTTTTCTGTTTCCAATGTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TTCTCCACCTTAAGTTTGATGGCAGAAGCCATTTTGCAGAAGGCTGGGTCAAGGCTGGGACAGTCACAGTaGCATCTGTTTGTTACCCTG +
Preference number: 4 (lower is better)
Translates to: FSTLSLMAEAILQKAGSRLGQSQ*HLFVTL
Trigger: CAGGGTAACAAACAGATGTCACTGTGACTGTCCCAG...CCTTGACCCAGCCTTCTGCAAAATGGCTTCTGCCATCAAACTTAAGGTGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCCTTGGACACAGCTGGTaGGATTTCCTTGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLLGHSW*DFLGHS
Trigger: GCTGTGACCAAGGAAATCTCACCAGCTGTGTCCAAG...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGGGAGTTGGAGAGAAACTGCTTTTGTCTCCGATTGGACACATCGCATGAATCTCTCTGTAGTAGCCATTaGGGCAGACACAGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: RELERNCFCLRLDTSHESLCSSH*GRHSWW
Trigger: CCACCAACTGTGTCTGCCGCAATGGCTACTACAGAG...AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
CDS-3UTR GCA 90 bp AGGGAGTTGGAGAGAAACTGCTTTTGTCTCCGATTGGACACATCGCATGAATCTATGCATGATGGACACTaGCGATGGAGCTGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: RELERNCFCLRLDTSHESMHDGH*RWSCLV
Trigger: AACCAGGCAGCTCCATCGGCAGTGTCCATCATGCAT...AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
CDS-3UTR GCA 90 bp TGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTCATGCATGATGGACACTaGCGATGGAGCTGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: WVQILALVYMTSVTLGKFMHDGH*RWSCLV
Trigger: AACCAGGCAGCTCCATCGGCAGTGTCCATCATGCAT...GAACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR GCA 90 bp ACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCGTCAATGTAAACAAACCCAGATaGAGGATCAACCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: TMTAHLTLRPSSECTLVNVNKPR*RINPSQ
Trigger: CTGAGAAGGGTTGATCCTGCATCTGGGTTTGTTTAC...ATTGACGAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TCCTTCCTCATGGGACTAAGGTGTATAAGTGTTTTGCACAGCCTGCCTCACCCAGGAAAAACTGGCAGCTaGAAGACCATTCTCCACCTT +
Preference number: 4 (lower is better)
Translates to: SFLMGLRCISVLHSLPHPGKTGS*KTILHL
Trigger: AAGGTGGAGAATGGTCTTGCAGCTGCCAGTTTTTCC...TGGGTGAGGCAGGCTGTGCAAAACACTTATACACCTTAGTCCCATGAGGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGCTTGCATTTTCTAAGCACCCGCTTCCTTTATATCTCCCTCAACCTTCCTACCAACACGTTGCACACCTaGTACGTGCGGATCGTGTTC +
Preference number: 4 (lower is better)
Translates to: SLHFLSTRFLYISLNLPTNTLHT*YVRIVF
Trigger: GAACACGATCCGCACGTACCAGGTGTGCAACGTGTT...GGTAGGAAGGTTGAGGGAGATATAAAGGAAGCGGGTGCTTAGAAAATGCAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp AGGGAGTTGGAGAGAAACTGCTTTTGTCTCCGATTGGACACATCGCATGAATCTAACACGTTGCACACCTaGTACGTGCGGATCGTGTTC +
Preference number: 4 (lower is better)
Translates to: RELERNCFCLRLDTSHESNTLHT*YVRIVF
Trigger: GAACACGATCCGCACGTACCAGGTGTGCAACGTGTT...AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
CDS-3UTR CCA 90 bp TGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTCAACACGTTGCACACCTaGTACGTGCGGATCGTGTTC +
Preference number: 4 (lower is better)
Translates to: WVQILALVYMTSVTLGKFNTLHT*YVRIVF
Trigger: GAACACGATCCGCACGTACCAGGTGTGCAACGTGTT...GAACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CCA 90 bp TTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAATGGGGAAGGTCTTGGTaGCCGAGTCAAAGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: FLGSNPGSSIYDLCDLGQWGRSW*PSQSQP
Trigger: AGGCTGACTTTGACTCGGCCACCAAGACCTTCCCCA...TTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CCA 90 bp AGGGAGTTGGAGAGAAACTGCTTTTGTCTCCGATTGGACACATCGCATGAATCTAGTTGGGGAAGGTCTTaGTGGCCGAGTCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: RELERNCFCLRLDTSHESSWGRS*WPSQSQ
Trigger: CTGACTTTGACTCGGCCACCAAGACCTTCCCCAACT...AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
CDS-3UTR CCA 90 bp GACTTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGTCTCGTCGGCTGCAATaGTATCCACCTTCACCCATG +
Preference number: 4 (lower is better)
Translates to: DFLGSNPGSSIYDLCDLGSRRLQ*YPPSPM
Trigger: CATGGGTGAAGGTGGATACCATTGCAGCCGACGAGA...CCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CCA 90 bp TTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTAAGGTGTACTGGGTGTaGGCCAGCAGGTCACTGATG +
Preference number: 4 (lower is better)
Translates to: LGSNPGSSIYDLCDLGQVKVYWV*ASRSLM
Trigger: CATCAGTGACCTGCTGGCCCACACCCAGTACACCTT...AACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CCA 90 bp TTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTATCTCGAAGGTGTACTaGGTGTGGGCCAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: LGSNPGSSIYDLCDLGQVISKVY*VWASRS
Trigger: TGACCTGCTGGCCCACACCCAGTACACCTTCGAGAT...AACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CCA 90 bp TTTTTCTTAATCCCTGTCTACAGCAGACCCTCTCTCTGCAGACATCAGGGCAGTAGTGGCAACTTCTCCTaGATGCTTGTCTGGTACTCG +
Preference number: 4 (lower is better)
Translates to: FFLIPVYSRPSLCRHQGSSGNFS*MLVWYS
Trigger: CGAGTACCAGACAAGCATCCAGGAGAAGTTGCCACT...ACTGCCCTGATGTCTGCAGAGAGAGGGTCTGCTGTAGACAGGGATTAAGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GGCATTGGAGTAACAGGGTCAGGGTTGATCTTGGACACAGCTGGTGAGATTTCCGCTTTTGTCTCCGATTaGACACATCGCATGAATCTC +
Preference number: 4 (lower is better)
Translates to: GIGVTGSGLILDTAGEISAFVSD*THRMNL
Trigger: GAGATTCATGCGATGTGTCCAATCGGAGACAAAAGC...GGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp ACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCGTCAATGCTTTTGTCTCCGATTaGACACATCGCATGAATCTC +
Preference number: 4 (lower is better)
Translates to: TMTAHLTLRPSSECTLVNAFVSD*THRMNL
Trigger: GAGATTCATGCGATGTGTCCAATCGGAGACAAAAGC...ATTGACGAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp ACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCGTCAATCCTCCTCCTGCCACGTaGACAATTCTGATTTTAATG +
Preference number: 4 (lower is better)
Translates to: TMTAHLTLRPSSECTLVNPPPAT*TILILM
Trigger: CATTAAAATCAGAATTGTCCACGTGGCAGGAGGAGG...ATTGACGAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCATTTCCACGGTGCCCTaGCCTGTGTTTACAAGGCAG +
Preference number: 4 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLISTVP*PVFTRQ
Trigger: CTGCCTTGTAAACACAGGCCAGGGCACCGTGGAAAT...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TTTTTCTTAATCCCTGTCTACAGCAGACCCTCTCTCTGCAGACATCAGGGCAGTCTGGCAGCTGCGTCTTaGAGTGACCTTTCTTTTGAC +
Preference number: 4 (lower is better)
Translates to: FFLIPVYSRPSLCRHQGSLAAAS*SDLSFD
Trigger: GTCAAAAGAAAGGTCACTCCAAGACGCAGCTGCCAG...ACTGCCCTGATGTCTGCAGAGAGAGGGTCTGCTGTAGACAGGGATTAAGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CAA 72 bp TGGGTCACGTGCATCCCAAGGGTACCAAGGTCTCCCTaGGAACTTACAGAGAACAGGGGTCATATTATAACT +
Preference number: 4 (lower is better)
Translates to: WVTCIPRVPRSP*ELTENRGHIIT
Trigger: AGTTATAATATGACCCCTGTTCTCTGTAAGTTCCAAGGGAGACCTTGGTACCCTTGGGATGCACGTGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CAA 72 bp TTTACGTTATCTTCCCTAGCAAGAGTCTTCCAGCCTTaGGTACCATCTTCAAACAACAGGGGCCCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: FTLSSLARVFQP*VPSSNNRGPGV
Trigger: CACTCCAGGGCCCCTGTTGTTTGAAGATGGTACCAAAGGCTGGAAGACTCTTGCTAGGGAAGATAACGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CAA 72 bp GACAGCCCCAGCCCACTTGAGCTTTCTTTTCTCTTATaGGCCAGCATCAGACACCAACTGTTTCTCATCATC +
Preference number: 4 (lower is better)
Translates to: DSPSPLELSFLL*ASIRHQLFLII
Trigger: GATGATGAGAAACAGTTGGTGTCTGATGCTGGCCAATAAGAGAAAAGAAAGCTCAAGTGGGCTGGGGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CAA 72 bp TACAAAGGCATTGGAGTAACAGGGTCAGGGTTGATCTaGGACACAGCTGGTGAGATTTCCTTGGTCACAGCA +
Preference number: 4 (lower is better)
Translates to: YKGIGVTGSGLI*DTAGEISLVTA
Trigger: TGCTGTGACCAAGGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCCTTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
3UTR CAA 72 bp TACTCCTACAAAGGCATTGGAGTAACAGGGTCAGGGTaGATCTTGGACACAGCTGGTGAGATTTCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: YSYKGIGVTGSG*ILDTAGEISLV
Trigger: GACCAAGGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCCTTTGTAGGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AGCTTGCATTTTCTAAGCACCCGCTTCCTTTATATCTCCCTCAACCTTCCTACCTGGCGTTGTACTCACTaGGCTCCTGCTTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: SLHFLSTRFLYISLNLPTWRCTH*APASHS
Trigger: ACTATGAGAAGCAGGAGCTCAGTGAGTACAACGCCA...GGTAGGAAGGTTGAGGGAGATATAAAGGAAGCGGGTGCTTAGAAAATGCAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR TCA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTATTCTGATTTTAATGTaGGCAAGAGCTCATTTGCAC +
Preference number: 4 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGILILM*ARAHLH
Trigger: GTGCAAATGAGCTCTTGCTCACATTAAAATCAGAAT...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TTTTTCTTAATCCCTGTCTACAGCAGACCCTCTCTCTGCAGACATCAGGGCAGTGATTATCTGCGTCAGTaGGGATGGAAACTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: FFLIPVYSRPSLCRHQGSDYLRQ*GWKLKQ
Trigger: CTGCTTCAGTTTCCATCCTCACTGACGCAGATAATC...ACTGCCCTGATGTCTGCAGAGAGAGGGTCTGCTGTAGACAGGGATTAAGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TTTTTCTTAATCCCTGTCTACAGCAGACCCTCTCTCTGCAGACATCAGGGCAGTTCCAAGCAGCTGAAGTaGCTCTTTGGATTATCTGCG +
Preference number: 4 (lower is better)
Translates to: FFLIPVYSRPSLCRHQGSSKQLK*LFGLSA
Trigger: CGCAGATAATCCAAAGAGTCACTTCAGCTGCTTGGA...ACTGCCCTGATGTCTGCAGAGAGAGGGTCTGCTGTAGACAGGGATTAAGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TGCCAAGGTGCATCTGTAACTCAGATCCAAGGGATGGAGCTTTTCTTAGTATCTCAGGGATGGGTTTCCTaGGCAATTTCTCATGCCCAC +
Preference number: 4 (lower is better)
Translates to: CQGASVTQIQGMELFLVSQGWVS*AISHAH
Trigger: GTGGGCATGAGAAATTGCTCAGGAAACCCATCCCTG...AGATACTAAGAAAAGCTCCATCCCTTGGATCTGAGTTACAGATGCACCTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AGGGAGTTGGAGAGAAACTGCTTTTGTCTCCGATTGGACACATCGCATGAATCTTTTGGGGGCTGGGCATaGCCAAGTGGTAATTACTCT +
Preference number: 4 (lower is better)
Translates to: RELERNCFCLRLDTSHESFGGWA*PSGNYS
Trigger: AGAGTAATTACCACTTGGTCATGCCCAGCCCCCAAA...AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TGCCAAGGTGCATCTGTAACTCAGATCCAAGGGATGGAGCTTTTCTTAGTATCTTCTGGAAGTACATCTTaGCGCTGTAGCGCCCGTAAC +
Preference number: 4 (lower is better)
Translates to: CQGASVTQIQGMELFLVSSGSTS*RCSARN
Trigger: GTTACGGGCGCTACAGCGGCAAGATGTACTTCCAGA...AGATACTAAGAAAAGCTCCATCCCTTGGATCTGAGTTACAGATGCACCTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGGGAGTTGGAGAGAAACTGCTTTTGTCTCCGATTGGACACATCGCATGAATCTGCAACTTCTCCTGGATaGTTGTCTGGTACTCGGCTT +
Preference number: 4 (lower is better)
Translates to: RELERNCFCLRLDTSHESATSPG*LSGTRL
Trigger: AAGCCGAGTACCAGACAAGCATCCAGGAGAAGTTGC...AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
CDS-3UTR GCA 90 bp AGGGAGTTGGAGAGAAACTGCTTTTGTCTCCGATTGGACACATCGCATGAATCTAGTTTGTGGGAAACCTaGCAATGCTTTCCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RELERNCFCLRLDTSHESSLWET*QCFPCG
Trigger: GCCACAGGGAAAGCATTGGCAGGTTTCCCACAAACT...AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TGCCAAGGTGCATCTGTAACTCAGATCCAAGGGATGGAGCTTTTCTTAGTATCTGTGTTTTGCACAGCCTaGCTCACCCAGTCCAATGCT +
Preference number: 4 (lower is better)
Translates to: CQGASVTQIQGMELFLVSVFCTA*LTQSNA
Trigger: AGCATTGGACTGGGTGAGGCAGGCTGTGCAAAACAC...AGATACTAAGAAAAGCTCCATCCCTTGGATCTGAGTTACAGATGCACCTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp ACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCGTCAATACTCTTTGGATTATCTaGGTCAGTGAGGATGGAAAC +
Preference number: 4 (lower is better)
Translates to: TMTAHLTLRPSSECTLVNTLWII*VSEDGN
Trigger: GTTTCCATCCTCACTGACGCAGATAATCCAAAGAGT...ATTGACGAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TTTTTCTTAATCCCTGTCTACAGCAGACCCTCTCTCTGCAGACATCAGGGCAGTGGTGGTGTATTCGCATaGGTATGTAGCATCACACAG +
Preference number: 4 (lower is better)
Translates to: FFLIPVYSRPSLCRHQGSGGVFA*VCSITQ
Trigger: CTGTGTGATGCTACATACGCATGCGAATACACCACC...ACTGCCCTGATGTCTGCAGAGAGAGGGTCTGCTGTAGACAGGGATTAAGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCGGCCAAGTCCTTTTCTaGAGCCAACACTCTGACCTT +
Preference number: 4 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLGQVLF*SQHSDL
Trigger: AAGGTCAGAGTGTTGGCTGCAGAAAAGGACTTGGCC...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGGAGAATAGGAAGGGGTTCTaGTTCGGAAATATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: CNSATLPGKDVLHPTQKENRKGF*FGNIPQ
Trigger: CTGAGGAATATTTCCGAAGCAGAACCCCTTCCTATT...CTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TGCCAAGGTGCATCTGTAACTCAGATCCAAGGGATGGAGCTTTTCTTAGTATCTAACACGTTGCACACCTaGTACGTGCGGATCGTGTTC +
Preference number: 4 (lower is better)
Translates to: CQGASVTQIQGMELFLVSNTLHT*YVRIVF
Trigger: GAACACGATCCGCACGTACCAGGTGTGCAACGTGTT...AGATACTAAGAAAAGCTCCATCCCTTGGATCTGAGTTACAGATGCACCTTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGCCAGACTTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCATCCACCTTCACCCATaGATTCTCCATCCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: SQTSWVQILALVYMTSVTIHLHP*ILHPVG
Trigger: CCCAACTGGATGGAGAATCCATGGGTGAAGGTGGAT...GGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAAGTCTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CCA 90 bp TTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTCTTGAAAGTCCCAGATaGACAACCTCGGCAGACGGT +
Preference number: 4 (lower is better)
Translates to: LGSNPGSSIYDLCDLGQVLESPR*TTSADG
Trigger: ACCGTCTGCCGAGGTTGTCCATCTGGGACTTTCAAG...AACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CCA 90 bp AGGGAGTTGGAGAGAAACTGCTTTTGTCTCCGATTGGACACATCGCATGAATCTTCCTGGATGCTTGTCTaGTACTCGGCTTCTGTCATG +
Preference number: 4 (lower is better)
Translates to: RELERNCFCLRLDTSHESSWMLV*YSASVM
Trigger: CATGACAGAAGCCGAGTACCAGACAAGCATCCAGGA...AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
CDS-3UTR CCA 90 bp AGGGAGTTGGAGAGAAACTGCTTTTGTCTCCGATTGGACACATCGCATGAATCTTTTCATCAACAGTCCTaGAGTGGGAAGCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: RELERNCFCLRLDTSHESFHQQS*SGKLLH
Trigger: GTGGAGGAGCTTCCCACTCCAGGACTGTTGATGAAA...AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GGAGACATTGGAAACAGAAAAATCCAAAGCTCATGGCCTTGCTCTGCTCCTTCCAAGGCTGTGTGGCCATaGAAGCTATGTCCCAAATGT +
Preference number: 4 (lower is better)
Translates to: GDIGNRKIQSSWPCSAPSKAVWP*KLCPKC
Trigger: ACATTTGGGACATAGCTTCCATGGCCACACAGCCTT...GGAAGGAGCAGAGCAAGGCCATGAGCTTTGGATTTTTCTGTTTCCAATGTCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp CCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGAGTTTGCTAGTCTGTaGAATGGGAGTAATAATTGT +
Preference number: 4 (lower is better)
Translates to: PSFELHVFLVTSRGWHRLEFASL*NGSNNC
Trigger: ACAATTATTACTCCCATTCCACAGACTAGCAAACTC...CAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR TCA 90 bp TTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTCCAGTTGTTCTGGCTTaGCTCAAACACGTTGCACAC +
Preference number: 4 (lower is better)
Translates to: LGSNPGSSIYDLCDLGQVPVVLA*LKHVAH
Trigger: GTGTGCAACGTGTTTGAGTCAAGCCAGAACAACTGG...AACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR TCA 90 bp AGCCAGACTTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCCGTTACAGTAGAGCTTaGTGGGTACATCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: SQTSWVQILALVYMTSVTRYSRA*WVHPPL
Trigger: AAGAGGTGGATGTACCCATCAAGCTCTACTGTAACG...GGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAAGTCTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR TCA 90 bp TTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAACACAGCTCTTGCAGATaGTGTTGTAGACGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: FLGSNPGSSIYDLCDLGQHSSCR*CCRRGP
Trigger: AGGACCTCGTCTACAACATCATCTGCAAGAGCTGTG...TTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR TCA 90 bp TGCCAAGGTGCATCTGTAACTCAGATCCAAGGGATGGAGCTTTTCTTAGTATCTTGGGGAAAGTTCAGCTaGTGCCATCTGAGTAAGAGG +
Preference number: 4 (lower is better)
Translates to: CQGASVTQIQGMELFLVSWGKFS*CHLSKR
Trigger: CCTCTTACTCAGATGGCATCAGCTGAACTTTCCCCA...AGATACTAAGAAAAGCTCCATCCCTTGGATCTGAGTTACAGATGCACCTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGGAGTTTGGGCATCCTATCTaGAAATGTCCTGCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: CNSATLPGKDVLHPTQKEFGHPI*KCPAFS
Trigger: AGAAAAAGCAGGACATTTTCAGATAGGATGCCCAAA...CTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AAAATCCAGAAATGTGCATATAAAATCTCGCCCTTGGTGTATTGCCTAAGTCAGGACTGGCAAAGGATCTaGCAGTGGAGAGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: KIQKCAYKISPLVYCLSQDWQRI*QWRGAE
Trigger: CTCAGCCCCTCTCCACTGTCAGATCCTTTGCCAGTC...CTGACTTAGGCAATACACCAAGGGCGAGATTTTATATGCACATTTCTGGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp TTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTTTGACTCAAACACGTTaGACACCTGGTACGTGCGGA +
Preference number: 4 (lower is better)
Translates to: LGSNPGSSIYDLCDLGQVLTQTR*TPGTCG
Trigger: TCCGCACGTACCAGGTGTGCAACGTGTTTGAGTCAA...AACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR GCA 90 bp GCACTCAGGCCATCATCTATTCTGATTGGTCTGCCCGAGTCTTCGCAGTTGATAAATAGGAAGGGGTTCTaGTTCGGAAATATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: ALRPSSILIGLPESSQLINRKGF*FGNIPQ
Trigger: CTGAGGAATATTTCCGAAGCAGAACCCCTTCCTATT...TATCAACTGCGAAGACTCGGGCAGACCAATCAGAATAGATGATGGCCTGAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGCTTGCATTTTCTAAGCACCCGCTTCCTTTATATCTCCCTCAACCTTCCTACCCGTAGCCAGTTGTTCTaGCTTGACTCAAACACGTTG +
Preference number: 4 (lower is better)
Translates to: SLHFLSTRFLYISLNLPTRSQLF*LDSNTL
Trigger: CAACGTGTTTGAGTCAAGCCAGAACAACTGGCTACG...GGTAGGAAGGTTGAGGGAGATATAAAGGAAGCGGGTGCTTAGAAAATGCAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp AGCTTGCATTTTCTAAGCACCCGCTTCCTTTATATCTCCCTCAACCTTCCTACCACTCGGCTTCTGTCATaGTCTGGAAGTACATCTTGC +
Preference number: 4 (lower is better)
Translates to: SLHFLSTRFLYISLNLPTTRLLS*SGSTSC
Trigger: GCAAGATGTACTTCCAGACCATGACAGAAGCCGAGT...GGTAGGAAGGTTGAGGGAGATATAAAGGAAGCGGGTGCTTAGAAAATGCAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CCA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCACCTCTAGAGAAGCCTaGAGGAAATGGGGTAGACAT +
Preference number: 4 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLTSREA*RKWGRH
Trigger: ATGTCTACCCCATTTCCTCCAGGCTTCTCTAGAGGT...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TCCTTCCTCATGGGACTAAGGTGTATAAGTGTTTTGCACAGCCTGCCTCACCCATTATTGCAATCCCTGTaGTTCCAACCTCCTGAGATT +
Preference number: 4 (lower is better)
Translates to: SFLMGLRCISVLHSLPHPLLQSL*FQPPEI
Trigger: AATCTCAGGAGGTTGGAACCACAGGGATTGCAATAA...TGGGTGAGGCAGGCTGTGCAAAACACTTATACACCTTAGTCCCATGAGGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGCCAGACTTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTGGAGCCAGACTTCTTaGGTTCAAATCCTGGCTCTA +
Preference number: 4 (lower is better)
Translates to: SQTSWVQILALVYMTSVTWSQTS*VQILAL
Trigger: TAGAGCCAGGATTTGAACCCAAGAAGTCTGGCTCCA...GGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAAGTCTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
3UTR CAA 72 bp TCATCTATTCTGATTGGTCTGCCCGAGTCTTCGCAGTaGATATTTTGGATATCATCCCCGAGGGAGAGGACT +
Preference number: 4 (lower is better)
Translates to: SSILIGLPESSQ*IFWISSPRERT
Trigger: AGTCCTCTCCCTCGGGGATGATATCCAAAATATCAACTGCGAAGACTCGGGCAGACCAATCAGAATAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCGCTGTTCCAAGCAGCTaGAGTGACTCTTTGGATTAT +
Preference number: 4 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLAVPSS*SDSLDY
Trigger: ATAATCCAAAGAGTCACTTCAGCTGCTTGGAACAGC...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp GCACTCAGGCCATCATCTATTCTGATTGGTCTGCCCGAGTCTTCGCAGTTGATATTTGGGCATCCTATCTaGAAATGTCCTGCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: ALRPSSILIGLPESSQLIFGHPI*KCPAFS
Trigger: AGAAAAAGCAGGACATTTTCAGATAGGATGCCCAAA...TATCAACTGCGAAGACTCGGGCAGACCAATCAGAATAGATGATGGCCTGAGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AGGGAGTTGGAGAGAAACTGCTTTTGTCTCCGATTGGACACATCGCATGAATCTGAGTTGGAGAGAAACTaGTTTTGTCTCCGATTGGAC +
Preference number: 4 (lower is better)
Translates to: RELERNCFCLRLDTSHESELERN*FCLRLD
Trigger: GTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTC...AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
CDS-3UTR GCA 90 bp TTTTTCTTAATCCCTGTCTACAGCAGACCCTCTCTCTGCAGACATCAGGGCAGTACATCACGCCTAAACTaGCTCAACCTCCACTTATAT +
Preference number: 4 (lower is better)
Translates to: FFLIPVYSRPSLCRHQGSTSRLN*LNLHLY
Trigger: ATATAAGTGGAGGTTGAGGCAGTTTAGGCGTGATGT...ACTGCCCTGATGTCTGCAGAGAGAGGGTCTGCTGTAGACAGGGATTAAGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTCGTAGCCAGTTGTTCTaGCTTGACTCAAACACGTTG +
Preference number: 4 (lower is better)
Translates to: LGSNPGSSIYDLCDLGQVRSQLF*LDSNTL
Trigger: CAACGTGTTTGAGTCAAGCCAGAACAACTGGCTACG...AACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CCA 90 bp TGCCAAGGTGCATCTGTAACTCAGATCCAAGGGATGGAGCTTTTCTTAGTATCTTCTGAAAGTGTTTCTTaGCTCTGGCCAGGTCACCTT +
Preference number: 4 (lower is better)
Translates to: CQGASVTQIQGMELFLVSSESVS*LWPGHL
Trigger: AAGGTGACCTGGCCAGAGCCAAGAAACACTTTCAGA...AGATACTAAGAAAAGCTCCATCCCTTGGATCTGAGTTACAGATGCACCTTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGGGAGTTGGAGAGAAACTGCTTTTGTCTCCGATTGGACACATCGCATGAATCTGCTGAAGTGACTCTTTaGATTATCTGCGTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: RELERNCFCLRLDTSHESAEVTL*IICVSE
Trigger: CTCACTGACGCAGATAATCCAAAGAGTCACTTCAGC...AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AAAATCCAGAAATGTGCATATAAAATCTCGCCCTTGGTGTATTGCCTAAGTCAGCAGGCTCAGCTCCTTTaGTGTCTGGCAGCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: KIQKCAYKISPLVYCLSQQAQLL*CLAAFS
Trigger: GGAGAAAGCTGCCAGACACCAAAGGAGCTGAGCCTG...CTGACTTAGGCAATACACCAAGGGCGAGATTTTATATGCACATTTCTGGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCGAGAGGATAATGCTTTaGCACCTGGCATATGGTAAG +
Preference number: 4 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLERIML*HLAYGK
Trigger: CTTACCATATGCCAGGTGCCAAAGCATTATCCTCTC...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp GCACTCAGGCCATCATCTATTCTGATTGGTCTGCCCGAGTCTTCGCAGTTGATAGGAATCTTTCACCTGTaGAACGTTAGAATTCATGAC +
Preference number: 4 (lower is better)
Translates to: ALRPSSILIGLPESSQLIGIFHL*NVRIHD
Trigger: GTCATGAATTCTAACGTTCCACAGGTGAAAGATTCC...TATCAACTGCGAAGACTCGGGCAGACCAATCAGAATAGATGATGGCCTGAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp AGGGAGTTGGAGAGAAACTGCTTTTGTCTCCGATTGGACACATCGCATGAATCTATTCAATTCACTAACTaGTTGCTCTGCTTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: RELERNCFCLRLDTSHESIQFTN*LLCLGV
Trigger: GACACCCAAGCAGAGCAATCAGTTAGTGAATTGAAT...AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TGCCAAGGTGCATCTGTAACTCAGATCCAAGGGATGGAGCTTTTCTTAGTATCTGCTGTTCCAAGCAGCTaGAGTGACTCTTTGGATTAT +
Preference number: 4 (lower is better)
Translates to: CQGASVTQIQGMELFLVSAVPSS*SDSLDY
Trigger: ATAATCCAAAGAGTCACTTCAGCTGCTTGGAACAGC...AGATACTAAGAAAAGCTCCATCCCTTGGATCTGAGTTACAGATGCACCTTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp GGAGACATTGGAAACAGAAAAATCCAAAGCTCATGGCCTTGCTCTGCTCCTTCCAAAAATTCTTCTGTTTaGCCAGTGGTGGCAGGAATA +
Preference number: 4 (lower is better)
Translates to: GDIGNRKIQSSWPCSAPSKNSSV*PVVAGI
Trigger: TATTCCTGCCACCACTGGGCAAACAGAAGAATTTTT...GGAAGGAGCAGAGCAAGGCCATGAGCTTTGGATTTTTCTGTTTCCAATGTCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AAAATCCAGAAATGTGCATATAAAATCTCGCCCTTGGTGTATTGCCTAAGTCAGTGCTCTGCTCCTTCCTaGCTGTGTTACCCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: KIQKCAYKISPLVYCLSQCSAPS*LCYPEQ
Trigger: TTGCTCAGGGTAACACAGCCAGGAAGGAGCAGAGCA...CTGACTTAGGCAATACACCAAGGGCGAGATTTTATATGCACATTTCTGGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR TCA 90 bp TTCTCCACCTTAAGTTTGATGGCAGAAGCCATTTTGCAGAAGGCTGGGTCAAGGATTGGAATCTTAGAATaGTGGGGTTTTGCAATCCTA +
Preference number: 4 (lower is better)
Translates to: FSTLSLMAEAILQKAGSRIGILE*WGFAIL
Trigger: TAGGATTGCAAAACCCCATCATTCTAAGATTCCAAT...CCTTGACCCAGCCTTCTGCAAAATGGCTTCTGCCATCAAACTTAAGGTGGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TGCCAAGGTGCATCTGTAACTCAGATCCAAGGGATGGAGCTTTTCTTAGTATCTGAGTCTTCCAGCCTTTaGTACCATCTTCAAACAACA +
Preference number: 4 (lower is better)
Translates to: CQGASVTQIQGMELFLVSESSSL*YHLQTT
Trigger: TGTTGTTTGAAGATGGTACCAAAGGCTGGAAGACTC...AGATACTAAGAAAAGCTCCATCCCTTGGATCTGAGTTACAGATGCACCTTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AAAATCCAGAAATGTGCATATAAAATCTCGCCCTTGGTGTATTGCCTAAGTCAGGACAGATGGCCTGGTTaGAATCTTCTGGGAATCACC +
Preference number: 4 (lower is better)
Translates to: KIQKCAYKISPLVYCLSQDRWPG*NLLGIT
Trigger: GGTGATTCCCAGAAGATTCCAACCAGGCCATCTGTC...CTGACTTAGGCAATACACCAAGGGCGAGATTTTATATGCACATTTCTGGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AAAATCCAGAAATGTGCATATAAAATCTCGCCCTTGGTGTATTGCCTAAGTCAGTTGAGTGAACAGGTCTaGACCATAGCCTTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: KIQKCAYKISPLVYCLSQLSEQV*TIALGS
Trigger: AGACCCCAAGGCTATGGTCCAGACCTGTTCACTCAA...CTGACTTAGGCAATACACCAAGGGCGAGATTTTATATGCACATTTCTGGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TCCTTCCTCATGGGACTAAGGTGTATAAGTGTTTTGCACAGCCTGCCTCACCCAGGAATCTTAGAAACATaGAATCATTCCATTGGAATC +
Preference number: 4 (lower is better)
Translates to: SFLMGLRCISVLHSLPHPGILET*NHSIGI
Trigger: GATTCCAATGGAATGATTCCATGTTTCTAAGATTCC...TGGGTGAGGCAGGCTGTGCAAAACACTTATACACCTTAGTCCCATGAGGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp TGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTCACAGGCTTTATAGCATaGAGGTTAAGATCACAAGCT +
Preference number: 4 (lower is better)
Translates to: WVQILALVYMTSVTLGKFTGFIA*RLRSQA
Trigger: AGCTTGTGATCTTAACCTCCATGCTATAAAGCCTGT...GAACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR TCA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCAACAGCAACGAACAATaGGACTCGAAATTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLNSNEQ*DSKFQE
Trigger: TTCTTGAAATTTCGAGTCTCATTGTTCGTTGCTGTT...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CCA 90 bp AAAATCCAGAAATGTGCATATAAAATCTCGCCCTTGGTGTATTGCCTAAGTCAGATCATCTATTCTGATTaGTCTGCCCGAGTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: KIQKCAYKISPLVYCLSQIIYSD*SARVFA
Trigger: TGCGAAGACTCGGGCAGACCAATCAGAATAGATGAT...CTGACTTAGGCAATACACCAAGGGCGAGATTTTATATGCACATTTCTGGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR GCA 90 bp AAAATCCAGAAATGTGCATATAAAATCTCGCCCTTGGTGTATTGCCTAAGTCAGACTCTTTGGATTATCTaGGTCAGTGAGGATGGAAAC +
Preference number: 4 (lower is better)
Translates to: KIQKCAYKISPLVYCLSQTLWII*VSEDGN
Trigger: GTTTCCATCCTCACTGACGCAGATAATCCAAAGAGT...CTGACTTAGGCAATACACCAAGGGCGAGATTTTATATGCACATTTCTGGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCTCCACCTCTTCCGCATaGGCGATGCAGCTGCCCCGG +
Preference number: 5 (lower is better)
Translates to: LAPLGSSRGPWPPGEWLASTSSA*AMQLPR
Trigger: CCGGGGCAGCTGCATCGCCAATGCGGAAGAGGTGGA...GGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS TCA 90 bp CGCAGCGGGTGCAGGCACCCCGGCCCGAGCCACAGCTCTTGCAGATaGTGTTGTAGACGAGGTCCTCTCGGCCTCCGGAGTCGCGGGGAG +
Preference number: 5 (lower is better)
Translates to: RSGCRHPGPSHSSCR*CCRRGPLGLRSRGE
Trigger: CTCCCCGCGACTCCGGAGGCCGAGAGGACCTCGTCTACAACATCATCTGCAAGAGCTGTGGCTCGGGCCGGGGTGCCTGCACCCGCTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000465676.1
ENST00000544305.5
CDS-3UTR CAA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGATCCAGGATCACGCCATaGGGCTGGTCCGGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRSRITP*GWSGWD
Trigger: GTCCCAGCCGGACCAGCCCAATGGCGTGATCCTGGA...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCTCCAGGATCACGCCATaGGGCTGGTCCGGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGSRITP*GWSGWD
Trigger: GTCCCAGCCGGACCAGCCCAATGGCGTGATCCTGGA...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGATCCAGCAGCGGCAGGTaGATGCCAGAGGAGAGGGGC +
Preference number: 5 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRSSSGR*MPEERG
Trigger: GCCCCTCTCCTCTGGCATCAACCTGCCGCTGCTGGA...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCTCCAGCAGCGGCAGGTaGATGCCAGAGGAGAGGGGC +
Preference number: 5 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGSSSGR*MPEERG
Trigger: GCCCCTCTCCTCTGGCATCAACCTGCCGCTGCTGGA...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp CTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCCGCCTGGCCAGGTGTaGAGTGAACAGGTCTGGACC +
Preference number: 5 (lower is better)
Translates to: LAPLGSSRGPWPPGEWLAPPGQV*SEQVWT
Trigger: GGTCCAGACCTGTTCACTCAACACCTGGCCAGGCGG...GGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CAA 90 bp TGGCGAGTGGCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGCCTCGAAGCCTGCTTaGCACATGCAGCGCCCGATG +
Preference number: 5 (lower is better)
Translates to: WRVAGPAVDRAPGGPARGASKPA*HMQRPM
Trigger: CATCGGGCGCTGCATGTGCAAAGCAGGCTTCGAGGC...CCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGCCACTCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGGTGCGTACTGTACATaGTCCCCGCAGCGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRGAYCT*SPQRVQ
Trigger: CTGCACCCGCTGCGGGGACAATGTACAGTACGCACC...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp GCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGCAGAGGGGAGGGAAGAGGCATGCTaGCCCGTGTCTCTGAGCGCA +
Preference number: 5 (lower is better)
Translates to: AGPAVDRAPGGPARGAEGREEAC*PVSLSA
Trigger: TGCGCTCAGAGACACGGGCAAGCATGCCTCTTCCCT...CCCCTCTGCCCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CAA 90 bp GCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCTGCTCCGCACCTCGGTGTaGATTTTCATGACGCGGCCA +
Preference number: 5 (lower is better)
Translates to: APLGSSRGPWPPGEWLALLRTSV*IFMTRP
Trigger: TGGCCGCGTCATGAAAATCAACACCGAGGTGCGGAG...CAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp CTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCACAGGCCTCATCCCCTaGGTTGGCCTTGAAAGTCCC +
Preference number: 5 (lower is better)
Translates to: LAPLGSSRGPWPPGEWLATGLIP*VGLESP
Trigger: GGGACTTTCAAGGCCAACCAAGGGGATGAGGCCTGT...GGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp GGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGTGCGTACTGTACATaGTCCCCGCAGCGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: GDVSWLAPLGSSRGPWPPGAYCT*SPQRVQ
Trigger: CTGCACCCGCTGCGGGGACAATGTACAGTACGCACC...AGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp GCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCTGATCACAGGTGTGCTCTaGGTCACGACACCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: APLGSSRGPWPPGEWLALITGVL*VTTPSR
Trigger: CCTGGAGGGTGTCGTGACCAAGAGCACACCTGTGAT...CAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAACAATTTGGCCGAACTaGGGCCGGTGGTTGCGGTCC +
Preference number: 5 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRTIWPN*GRWLRS
Trigger: GGACCGCAACCACCGGCCCAAGTTCGGCCAAATTGT...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp GGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTAGGGGCGCCATGGCTTaGAGGCTGTTGGGATTGCGG +
Preference number: 5 (lower is better)
Translates to: GDVSWLAPLGSSRGPWPPRGAMA*RLLGLR
Trigger: CCGCAATCCCAACAGCCTCAAAGCCATGGCGCCCCT...AGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp GGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGGAGGTGAAGCCGGCATaGGCGAAGCTCTCCTTGTAC +
Preference number: 5 (lower is better)
Translates to: GWHRLVLPVARGLLASGWEVKPA*AKLSLY
Trigger: GTACAAGGAGAGCTTCGCCAATGCCGGCTTCACCTC...CCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp GGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTCTGCAGACCTGGGGGTaGCCCATCCTCAGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: GDVSWLAPLGSSRGPWPPLQTWG*PILRKA
Trigger: AGCCTTCCTGAGGATGGGCAACCCCCAGGTCTGCAG...AGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CAA 90 bp GGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGTCTGGACCATAGCCTaGGGGTCTGTGGGGTCTCCC +
Preference number: 5 (lower is better)
Translates to: GDVSWLAPLGSSRGPWPPVWTIA*GSVGSP
Trigger: GGGAGACCCCACAGACCCCAAGGCTATGGTCCAGAC...AGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CAA 90 bp GGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTCCTCAGAGGCTCAACTaGGTGCCCCCTGCCCATCAG +
Preference number: 5 (lower is better)
Translates to: GDVSWLAPLGSSRGPWPPPQRLN*VPPAHQ
Trigger: CTGATGGGCAGGGGGCACCAAGTTGAGCCTCTGAGG...AGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS CCA 90 bp GGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTaGCCTCCTGGCGAGTGGCTGGCCCTCCACAGACTGAATCTGGTT +
Preference number: 5 (lower is better)
Translates to: GDVSWLAPLGSSRGP*PPGEWLALHRLNLV
Trigger: AACCAGATTCAGTCTGTGGAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400191.7
CDS-3UTR CAA 90 bp GCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCTGCTTGACTCAAACACGTaGCACACCTGGTACGTGCGG +
Preference number: 5 (lower is better)
Translates to: APLGSSRGPWPPGEWLALLDSNT*HTWYVR
Trigger: CCGCACGTACCAGGTGTGCAACGTGTTTGAGTCAAG...CAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp CTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTGCCTCGAAGCCTGCTTaGCACATGCAGCGCCCGATG +
Preference number: 5 (lower is better)
Translates to: LGDVSWLAPLGSSRGPWPASKPA*HMQRPM
Trigger: CATCGGGCGCTGCATGTGCAAAGCAGGCTTCGAGGC...AGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGAAGTGGTCCGGCTGTaGATGGGACAGTGGGTACAG +
Preference number: 5 (lower is better)
Translates to: RLVAGTAWFFPWPVASWREVVRL*MGQWVQ
Trigger: CTGTACCCACTGTCCCATCAACAGCCGGACCACTTC...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAAGTGGTCCGGCTGTaGATGGGACAGTGGGTACAG +
Preference number: 5 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGEVVRL*MGQWVQ
Trigger: CTGTACCCACTGTCCCATCAACAGCCGGACCACTTC...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCTTGCGGCAGACACAGTaGGTGGCCCCTTCAGAAGTG +
Preference number: 5 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGLRQTQ*VAPSEV
Trigger: CACTTCTGAAGGGGCCACCAACTGTGTCTGCCGCAA...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGAGGTGAAGCCGGCATaGGCGAAGCTCTCCTTGTAC +
Preference number: 5 (lower is better)
Translates to: RLVAGTAWFFPWPVASWREVKPA*AKLSLY
Trigger: GTACAAGGAGAGCTTCGCCAATGCCGGCTTCACCTC...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGACCAGGCTCAGCTCCTTaGGTGTCTGGCAGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRPGSAP*VSGSFL
Trigger: GAGAAAGCTGCCAGACACCAAAGGAGCTGAGCCTGG...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS GCA 90 bp CTTCCGCATTGGCGATGCAGCTGCCCCGGGCAGCCACCAGCGATGTaGTCTCAGCCCCCGACAGGGTTTCCTGGAAGATGGCGCCATTCT +
Preference number: 5 (lower is better)
Translates to: LPHWRCSCPGQPPAM*SQPPTGFPGRWRHS
Trigger: AGAATGGCGCCATCTTCCAGGAAACCCTGTCGGGGGCTGAGAGCACATCGCTGGTGGCTGCCCGGGGCAGCTGCATCGCCAATGCGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000544305.5
CDS-3UTR CAA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCCAGTTGGGGAAGGTCTaGGTGGCCGAGTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGQLGKV*VAESKS
Trigger: TGACTTTGACTCGGCCACCAAGACCTTCCCCAACTG...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp CTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTCCTGGCTCCACCTCTTCCGCATaGGCGATGCAGCTGCCCCGG +
Preference number: 5 (lower is better)
Translates to: LSAPSGGQGITVNDPGPGSTSSA*AMQLPR
Trigger: CCGGGGCAGCTGCATCGCCAATGCGGAAGAGGTGGA...GCCAGGACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp GCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGCAGAGGGGTCCCCTTGGTTGGCCTaGAAAGTCCCAGATGGACAA +
Preference number: 5 (lower is better)
Translates to: AGPAVDRAPGGPARGAEGSPWLA*KVPDGQ
Trigger: TTGTCCATCTGGGACTTTCAAGGCCAACCAAGGGGA...CCCCTCTGCCCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp CATGATCTATTCCTCACCCTCCAGATCACCCCACTTGGCTGGTGGGGCCGGTGGGCGCGGAGGGGATGGTaGTGCAGGGCATGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: HDLFLTLQITPLGWWGRWARRGW*CRACPG
Trigger: CCCTGGACATGCCCTGCACAACCATCCCCTCCGCGC...CCACCGGCCCCACCAGCCAAGTGGGGTGATCTGGAGGGTGAGGAATAGATCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CAA 90 bp GTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTTGCACGGTGACCGTGTaGGTGGGGCTTTTTATGGCT +
Preference number: 5 (lower is better)
Translates to: VAGTAWFFPWPVASWRVACTVTV*VGLFMA
Trigger: AGCCATAAAAAGCCCCACCAACACGGTCACCGTGCA...AGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGCCACTGGTGTAGTGTaGCAGCTTGTCCGTGTACTC +
Preference number: 5 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRATGVV*QLVRVL
Trigger: GAGTACACGGACAAGCTGCAACACTACACCAGTGGC...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp CTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTACAATTTGGCCGAACTaGGGCCGGTGGTTGCGGTCC +
Preference number: 5 (lower is better)
Translates to: LGDVSWLAPLGSSRGPWPTIWPN*GRWLRS
Trigger: GGACCGCAACCACCGGCCCAAGTTCGGCCAAATTGT...AGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp AGCCCTGAGTCCCTTAAGTGTCTCCTACTGCCCCGCCACCCGGGTCCCTGCTCTAGGGGCGCCATGGCTTaGAGGCTGTTGGGATTGCGG +
Preference number: 5 (lower is better)
Translates to: SPESLKCLLLPRHPGPCSRGAMA*RLLGLR
Trigger: CCGCAATCCCAACAGCCTCAAAGCCATGGCGCCCCT...AGAGCAGGGACCCGGGTGGCGGGGCAGTAGGAGACACTTAAGGGACTCAGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCGAGTTGCATGTTTTCTaGGTGACGTCTCGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: LAPLGSSRGPWPPGEWLAELHVF*VTSRGW
Trigger: CCAGCCACGAGACGTCACCAAGAAAACATGCAACTC...GGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS GCA 90 bp GAAGTACATCTTGCCGCTGTAGCGCCCGTAACCTGCCACGGTGCGTaGCCGCACCTGGAAGACATAGATGGCGCCGGCTTTGAGGCCCTG +
Preference number: 5 (lower is better)
Translates to: EVHLAAVAPVTCHGA*PHLEDIDGAGFEAL
Trigger: CAGGGCCTCAAAGCCGGCGCCATCTATGTCTTCCAGGTGCGGGCACGCACCGTGGCAGGTTACGGGCGCTACAGCGGCAAGATGTACTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000465676.1
CDS-3UTR CAA 90 bp CTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCGGCGCCGGATAAACTaGGTCCGTAGCCAGTTGTTC +
Preference number: 5 (lower is better)
Translates to: LGDVSWLAPLGSSRGPWPRRRIN*VRSQLF
Trigger: GAACAACTGGCTACGGACCAAGTTTATCCGGCGCCG...AGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp CCATCTCCTCGGATCTGGGAAAGGTCCCGAGAGGTAGTCTCCTTGGCTCCCCTTGCGCGGAGGGGATGGTaGTGCAGGGCATGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: PSPRIWERSREVVSLAPLARRGW*CRACPG
Trigger: CCCTGGACATGCCCTGCACAACCATCCCCTCCGCGC...AAGGGGAGCCAAGGAGACTACCTCTCGGGACCTTTCCCAGATCCGAGGAGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCATGAGGGAGGTCTCATaGACACTGGAAATCACAGCC +
Preference number: 5 (lower is better)
Translates to: LAPLGSSRGPWPPGEWLAMREVS*TLEITA
Trigger: GGCTGTGATTTCCAGTGTCAATGAGACCTCCCTCAT...GGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp GGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTTGCACGGTGACCGTGTaGGTGGGGCTTTTTATGGCT +
Preference number: 5 (lower is better)
Translates to: GDVSWLAPLGSSRGPWPPCTVTV*VGLFMA
Trigger: AGCCATAAAAAGCCCCACCAACACGGTCACCGTGCA...AGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAACTTCTCCTGGATGCTaGTCTGGTACTCGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRTSPGC*SGTRLL
Trigger: CAGAAGCCGAGTACCAGACAAGCATCCAGGAGAAGT...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp TTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCATCACAGGTGTGCTCTaGGTCACGACACCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LVTSRGWHRLVLPVARGLITGVL*VTTPSR
Trigger: CCTGGAGGGTGTCGTGACCAAGAGCACACCTGTGAT...GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp AGCCCTGAGTCCCTTAAGTGTCTCCTACTGCCCCGCCACCCGGGTCCCTGCTCTACAATTTGGCCGAACTaGGGCCGGTGGTTGCGGTCC +
Preference number: 5 (lower is better)
Translates to: SPESLKCLLLPRHPGPCSTIWPN*GRWLRS
Trigger: GGACCGCAACCACCGGCCCAAGTTCGGCCAAATTGT...AGAGCAGGGACCCGGGTGGCGGGGCAGTAGGAGACACTTAAGGGACTCAGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TACCAACTGTGTGCAGAGCAGCCGGAAACTCCCCTAACACTGCTGGGCAGGCGGTCCAGCAGCGGCAGGTaGATGCCAGAGGAGAGGGGC +
Preference number: 5 (lower is better)
Translates to: YQLCAEQPETPLTLLGRRSSSGR*MPEERG
Trigger: GCCCCTCTCCTCTGGCATCAACCTGCCGCTGCTGGA...CCGCCTGCCCAGCAGTGTTAGGGGAGTTTCCGGCTGCTCTGCACACAGTTGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGAGTTGCATGTTTTCTaGGTGACGTCTCGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRELHVF*VTSRGW
Trigger: CCAGCCACGAGACGTCACCAAGAAAACATGCAACTC...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp GGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCTCGCCCTTGGTGTATaGCCTAAGTCAGTAAGCAGA +
Preference number: 5 (lower is better)
Translates to: GWHRLVLPVARGLLASGWLALGV*PKSVSR
Trigger: TCTGCTTACTGACTTAGGCAATACACCAAGGGCGAG...CCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CAA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGATGGCACTTGGGGAGGTaGAGCCAGGAAAGGATTAGT +
Preference number: 5 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRWHLGR*SQERIS
Trigger: ACTAATCCTTTCCTGGCTCAACCTCCCCAAGTGCCA...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CAA 90 bp GGCCGCTCCGGGGGCAATTCCTTCTCGGGGAGAGGAGTAGCTGGGAGGCATCCTCCAGGCTCAGCTCCTTaGGTGTCTGGCAGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: GRSGGNSFSGRGVAGRHPPGSAP*VSGSFL
Trigger: GAGAAAGCTGCCAGACACCAAAGGAGCTGAGCCTGG...AGGATGCCTCCCAGCTACTCCTCTCCCCGAGAAGGAATTGCCCCCGGAGCGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp GCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCTGGCGATGGCAAACATTTaGAGAAATCCCAGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: APLGSSRGPWPPGEWLALAMANI*RNPRRW
Trigger: CCACCTCCTGGGATTTCTCAAAATGTTTGCCATCGC...CAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CAA 90 bp TGGCGAGTGGCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGTAACAGGGTCAGGGTaGATCTTGGACACAGCTGGT +
Preference number: 5 (lower is better)
Translates to: WRVAGPAVDRAPGGPARGVTGSG*ILDTAG
Trigger: ACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTAC...CCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGCCACTCGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS TCA 90 bp GGCTGGGACCACGACAGGGTAATGCTGTCCACGGTGCGGCTCACCTaGTGCATGATGGACACTGCCGATGGAGCTGCCTGGTTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: GWDHDRVMLSTVRLT*CMMDTADGAAWLVV
Trigger: CACCACCAACCAGGCAGCTCCATCGGCAGTGTCCATCATGCATCAGGTGAGCCGCACCGTGGACAGCATTACCCTGTCGTGGTCCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000465676.1
ENST00000490436.1
ENST00000544305.5
CDS-3UTR CAA 90 bp GGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTTCCCCTTGGTTGGCCTaGAAAGTCCCAGATGGACAA +
Preference number: 5 (lower is better)
Translates to: GDVSWLAPLGSSRGPWPPSPWLA*KVPDGQ
Trigger: TTGTCCATCTGGGACTTTCAAGGCCAACCAAGGGGA...AGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp TTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCGCCTCATCCCCTTGGTaGGCCTTGAAAGTCCCAGAT +
Preference number: 5 (lower is better)
Translates to: LVTSRGWHRLVLPVARGLASSPW*ALKVPD
Trigger: ATCTGGGACTTTCAAGGCCAACCAAGGGGATGAGGC...GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp AGGAGCAGGCTGCTACCCTGCGGTCATGACGCACTTTCCCTAGCATCATGTGGTGCGCGGAGGGGATGGTaGTGCAGGGCATGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: RSRLLPCGHDALSLASCGARRGW*CRACPG
Trigger: CCCTGGACATGCCCTGCACAACCATCCCCTCCGCGC...ACCACATGATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGCAGCCTGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCGATGGAGCTGCCTGGTaGGTGGTGATGTTCACAGAG +
Preference number: 5 (lower is better)
Translates to: LVTSRGWHRLVLPVARGLDGAAW*VVMFTE
Trigger: CTCTGTGAACATCACCACCAACCAGGCAGCTCCATC...GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp GAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTTCCAGGATCACGCCATaGGGCTGGTCCGGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: ESSGLHSSGWGRHFRRRSSRITP*GWSGWD
Trigger: GTCCCAGCCGGACCAGCCCAATGGCGTGATCCTGGA...ACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp GGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTACTTCTCCTGGATGCTaGTCTGGTACTCGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: GDVSWLAPLGSSRGPWPPTSPGC*SGTRLL
Trigger: CAGAAGCCGAGTACCAGACAAGCATCCAGGAGAAGT...AGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp GCAGCTGGTCCCCATTTCCACGGTGCCCTGGCCTGTGTTTACAAGGCAGCTTTCTCCAGCAGCGGCAGGTaGATGCCAGAGGAGAGGGGC +
Preference number: 5 (lower is better)
Translates to: AAGPHFHGALACVYKAAFSSSGR*MPEERG
Trigger: GCCCCTCTCCTCTGGCATCAACCTGCCGCTGCTGGA...GAAAGCTGCCTTGTAAACACAGGCCAGGGCACCGTGGAAATGGGGACCAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TGGCGAGTGGCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGGTCCCTGCTTCCCTATaGGGACATGATCTATTCCTC +
Preference number: 5 (lower is better)
Translates to: WRVAGPAVDRAPGGPARGVPASL*GHDLFL
Trigger: GAGGAATAGATCATGTCCCAATAGGGAAGCAGGGAC...CCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGCCACTCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CAA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGATTTATGGCTGTGGCGTaGTACTCACTGAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRFMAVA*YSLSSF
Trigger: GAAGGAGCTCAGTGAGTACAACGCCACAGCCATAAA...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp CTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCGGAGAGAAACTGCTTTaGTCTCCGATTGGACACATC +
Preference number: 5 (lower is better)
Translates to: LAPLGSSRGPWPPGEWLAGEKLL*SPIGHI
Trigger: GATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCC...GGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCCCTTCCCAGAGGGAGTaGGAGAGAAACTGCTTTTGT +
Preference number: 5 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGPSQRE*ERNCFC
Trigger: ACAAAAGCAGTTTCTCTCCAACTCCCTCTGGGAAGG...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp GGCCGCTCCGGGGGCAATTCCTTCTCGGGGAGAGGAGTAGCTGGGAGGCATCCTCAGAGAAAACCAGAGTaGGCTGTGCCTGGGGGTACA +
Preference number: 5 (lower is better)
Translates to: GRSGGNSFSGRGVAGRHPQRKPE*AVPGGT
Trigger: TGTACCCCCAGGCACAGCCAACTCTGGTTTTCTCTG...AGGATGCCTCCCAGCTACTCCTCTCCCCGAGAAGGAATTGCCCCCGGAGCGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACCGAGAGGTAGTCTCCTaGGCTCCCCTTCCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: RGMLARVSERTLWRAGYHREVVS*APLPQP
Trigger: TGGCTGAGGAAGGGGAGCCAAGGAGACTACCTCTCG...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCCGGGGATCTGGGATTaGACTGGCAAAGGATCTGAC +
Preference number: 5 (lower is better)
Translates to: LVTSRGWHRLVLPVARGLPGIWD*TGKGSD
Trigger: GTCAGATCCTTTGCCAGTCAAATCCCAGATCCCCGG...GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CAA 90 bp AGCCCTGAGTCCCTTAAGTGTCTCCTACTGCCCCGCCACCCGGGTCCCTGCTCTGCTGGTGAGATTTCCTaGGTCACAGCAGTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: SPESLKCLLLPRHPGPCSAGEIS*VTAVGS
Trigger: GGACCCCACTGCTGTGACCAAGGAAATCTCACCAGC...AGAGCAGGGACCCGGGTGGCGGGGCAGTAGGAGACACTTAAGGGACTCAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS GCA 90 bp TGCAGGGCATGTCCAGGGGGTCCAGGTCTGCTCTGTAGTAGCCATTaGGGCAGACACAGTTGGTGGCCCCTTCAGAAGTGGTCCGGCTGT +
Preference number: 5 (lower is better)
Translates to: CRACPGGPGLLCSSH*GRHSWWPLQKWSGC
Trigger: ACAGCCGGACCACTTCTGAAGGGGCCACCAACTGTGTCTGCCGCAATGGCTACTACAGAGCAGACCTGGACCCCCTGGACATGCCCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000465676.1
ENST00000544305.5
CDS-3UTR CAA 90 bp TGCCCCCTGCCCATCAGAGTCCCTCTCCACAGAGGGGAAAGCGGCCAGGCTGATCAGTTGGGGAAGGTCTaGGTGGCCGAGTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: CPLPIRVPLHRGESGQADQLGKV*VAESKS
Trigger: TGACTTTGACTCGGCCACCAAGACCTTCCCCAACTG...ATCAGCCTGGCCGCTTTCCCCTCTGTGGAGAGGGACTCTGATGGGCAGGGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CCATCTCCTCGGATCTGGGAAAGGTCCCGAGAGGTAGTCTCCTTGGCTCCCCTTGCCTCGAAGCCTGCTTaGCACATGCAGCGCCCGATG +
Preference number: 5 (lower is better)
Translates to: PSPRIWERSREVVSLAPLASKPA*HMQRPM
Trigger: CATCGGGCGCTGCATGTGCAAAGCAGGCTTCGAGGC...AAGGGGAGCCAAGGAGACTACCTCTCGGGACCTTTCCCAGATCCGAGGAGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGCGCGGAGGGGATGGTaGTGCAGGGCATGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: PSFELHVFLVTSRGWHRLARRGW*CRACPG
Trigger: CCCTGGACATGCCCTGCACAACCATCCCCTCCGCGC...CAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp TGGCGAGTGGCTGGCCCTGCAGTGGATAGAGCACCAGGAGGGCCGGCACGTGGGTCCTGCTCAATGGCATaGATTACATCCTGGTTGGTC +
Preference number: 5 (lower is better)
Translates to: WRVAGPAVDRAPGGPARGSCSMA*ITSWLV
Trigger: GACCAACCAGGATGTAATCAATGCCATTGAGCAGGA...CCCACGTGCCGGCCCTCCTGGTGCTCTATCCACTGCAGGGCCAGCCACTCGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp GCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTGGCCCTGATCTTGTCTAGCGTGTaGACAATTTGGCCGAACTTG +
Preference number: 5 (lower is better)
Translates to: APLGSSRGPWPPGEWLALILSSV*TIWPNL
Trigger: CAAGTTCGGCCAAATTGTCAACACGCTAGACAAGAT...CAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp CCATCTCCTCGGATCTGGGAAAGGTCCCGAGAGGTAGTCTCCTTGGCTCCCCTTAGGGGCGCCATGGCTTaGAGGCTGTTGGGATTGCGG +
Preference number: 5 (lower is better)
Translates to: PSPRIWERSREVVSLAPLRGAMA*RLLGLR
Trigger: CCGCAATCCCAACAGCCTCAAAGCCATGGCGCCCCT...AAGGGGAGCCAAGGAGACTACCTCTCGGGACCTTTCCCAGATCCGAGGAGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACGAGGTGAAGCCGGCATaGGCGAAGCTCTCCTTGTAC +
Preference number: 5 (lower is better)
Translates to: RGMLARVSERTLWRAGYHEVKPA*AKLSLY
Trigger: GTACAAGGAGAGCTTCGCCAATGCCGGCTTCACCTC...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGGAGAGAAACTGCTTTaGTCTCCGATTGGACACATC +
Preference number: 5 (lower is better)
Translates to: RLVAGTAWFFPWPVASWRGEKLL*SPIGHI
Trigger: GATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCC...TCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp GTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTCTGCAGACCTGGGGGTaGCCCATCCTCAGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: VSLSAPSGGQGITVNDPGLQTWG*PILRKA
Trigger: AGCCTTCCTGAGGATGGGCAACCCCCAGGTCTGCAG...ACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp GCCAGGAAAGGATTAGTAACCAGGCAGCGGGTGGCTCAGAGCTGTGTGCCTGGGGGCCCTGCAGCTTCCTaGCTGCAGGGAGGGAAATTC +
Preference number: 5 (lower is better)
Translates to: ARKGLVTRQRVAQSCVPGGPAAS*LQGGKF
Trigger: GAATTTCCCTCCCTGCAGCAAGGAAGCTGCAGGGCC...CCCAGGCACACAGCTCTGAGCCACCCGCTGCCTGGTTACTAATCCTTTCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp GAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTCCTCAGAGGCTCAACTaGGTGCCCCCTGCCCATCAG +
Preference number: 5 (lower is better)
Translates to: ESSGLHSSGWGRHFRRRSPQRLN*VPPAHQ
Trigger: CTGATGGGCAGGGGGCACCAAGTTGAGCCTCTGAGG...ACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS GCA 90 bp TGCTTGTCTGGTACTCGGCTTCTGTCATGGTCTGGAAGTACATCTTaGCGCTGTAGCGCCCGTAACCTGCCACGGTGCGTGCCCGCACCT +
Preference number: 5 (lower is better)
Translates to: CLSGTRLLSWSGSTS*RCSARNLPRCVPAP
Trigger: AGGTGCGGGCACGCACCGTGGCAGGTTACGGGCGCTACAGCGGCAAGATGTACTTCCAGACCATGACAGAAGCCGAGTACCAGACAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000465676.1
CDS CCA 90 bp GTGGTCCGGCTGTTGATGGGACAGTGGGTACAGGCCTCATCCCCTTaGTTGGCCTTGAAAGTCCCAGATGGACAACCTCGGCAGACGGTG +
Preference number: 5 (lower is better)
Translates to: VVRLLMGQWVQASSP*LALKVPDGQPRQTV
Trigger: CACCGTCTGCCGAGGTTGTCCATCTGGGACTTTCAAGGCCAACCAAGGGGATGAGGCCTGTACCCACTGTCCCATCAACAGCCGGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000544305.5
CDS-3UTR CAA 90 bp AGGAGCAGGCTGCTACCCTGCGGTCATGACGCACTTTCCCTAGCATCATGTGGTGCCTCGAAGCCTGCTTaGCACATGCAGCGCCCGATG +
Preference number: 5 (lower is better)
Translates to: RSRLLPCGHDALSLASCGASKPA*HMQRPM
Trigger: CATCGGGCGCTGCATGTGCAAAGCAGGCTTCGAGGC...ACCACATGATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGCAGCCTGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTATGAGGGAGGTCTCATaGACACTGGAAATCACAGCC +
Preference number: 5 (lower is better)
Translates to: LGDVSWLAPLGSSRGPWPMREVS*TLEITA
Trigger: GGCTGTGATTTCCAGTGTCAATGAGACCTCCCTCAT...AGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp TCTGCTACTTATGTACCTGCAGGGGCTCACCCTGATTCCCAGGGCATCGAAGGCGGTGCGTACTGTACATaGTCCCCGCAGCGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: SATYVPAGAHPDSQGIEGGAYCT*SPQRVQ
Trigger: CTGCACCCGCTGCGGGGACAATGTACAGTACGCACC...GCCTTCGATGCCCTGGGAATCAGGGTGAGCCCCTGCAGGTACATAAGTAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CATGATCTATTCCTCACCCTCCAGATCACCCCACTTGGCTGGTGGGGCCGGTGGTGGCCATCTTGCCCCTaGGTCCCTGCTTCCCTATTG +
Preference number: 5 (lower is better)
Translates to: HDLFLTLQITPLGWWGRWWPSCP*VPASLL
Trigger: CAATAGGGAAGCAGGGACCAAGGGGCAAGATGGCCA...CCACCGGCCCCACCAGCCAAGTGGGGTGATCTGGAGGGTGAGGAATAGATCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CAA 90 bp GTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCGAGTGGCTTTTCCGTCGTTTGAGTaGCATGTTTTCTTGGTGACG +
Preference number: 5 (lower is better)
Translates to: VAGTAWFFPWPVASWRVAFPSFE*HVFLVT
Trigger: CGTCACCAAGAAAACATGCAACTCAAACGACGGAAA...AGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCTCCAACTCACTTCCTTaGTTGCCTGTGCTTTTGACA +
Preference number: 5 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGSNSLP*LPVLLT
Trigger: TGTCAAAAGCACAGGCAACAAAGGAAGTGAGTTGGA...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CAA 90 bp GCCAGGAAAGGATTAGTAACCAGGCAGCGGGTGGCTCAGAGCTGTGTGCCTGGGAGGAAAAGCCGTGTCTaGGTCTGGGTAGCCGGGCTT +
Preference number: 5 (lower is better)
Translates to: ARKGLVTRQRVAQSCVPGRKSRV*VWVAGL
Trigger: AAGCCCGGCTACCCAGACCAAGACACGGCTTTTCCT...CCCAGGCACACAGCTCTGAGCCACCCGCTGCCTGGTTACTAATCCTTTCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTGTCACGTCTCTGAGTTaGCTAGTCTGTGGAATGGGA +
Preference number: 5 (lower is better)
Translates to: LGDVSWLAPLGSSRGPWPVTSLS*LVCGMG
Trigger: TCCCATTCCACAGACTAGCAAACTCAGAGACGTGAC...AGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CAA 90 bp CAGACGATGGGCTGTGCTGTGCTGGATGTTCACTCTGACCGTGGCGCTTCTAGCGGATTCTCCATCCAGTaGGGGAAGGTCTTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: QTMGCAVLDVHSDRGASSGFSIQ*GKVLVA
Trigger: GGCCACCAAGACCTTCCCCAACTGGATGGAGAATCC...GCTAGAAGCGCCACGGTCAGAGTGAACATCCAGCACAGCACAGCCCATCGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TGGCCAGCCAAAGTGACCCCAACCCGGAGAATGTCCCTTTGGGAGAGAAGCACGCTCCGCACCTCGGTGTaGATTTTCATGACGCGGCCA +
Preference number: 5 (lower is better)
Translates to: WPAKVTPTRRMSLWERSTLRTSV*IFMTRP
Trigger: TGGCCGCGTCATGAAAATCAACACCGAGGTGCGGAG...CGTGCTTCTCTCCCAAAGGGACATTCTCCGGGTTGGGGTCACTTTGGCTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CAA 90 bp CCATCTCCTCGGATCTGGGAAAGGTCCCGAGAGGTAGTCTCCTTGGCTCCCCTTCTCCGCACCTCGGTGTaGATTTTCATGACGCGGCCA +
Preference number: 5 (lower is better)
Translates to: PSPRIWERSREVVSLAPLLRTSV*IFMTRP
Trigger: TGGCCGCGTCATGAAAATCAACACCGAGGTGCGGAG...AAGGGGAGCCAAGGAGACTACCTCTCGGGACCTTTCCCAGATCCGAGGAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACTCCCCTTGGTTGGCCTaGAAAGTCCCAGATGGACAA +
Preference number: 5 (lower is better)
Translates to: RGMLARVSERTLWRAGYHSPWLA*KVPDGQ
Trigger: TTGTCCATCTGGGACTTTCAAGGCCAACCAAGGGGA...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TACCAACTGTGTGCAGAGCAGCCGGAAACTCCCCTAACACTGCTGGGCAGGCGGGCCTCATCCCCTTGGTaGGCCTTGAAAGTCCCAGAT +
Preference number: 5 (lower is better)
Translates to: YQLCAEQPETPLTLLGRRASSPW*ALKVPD
Trigger: ATCTGGGACTTTCAAGGCCAACCAAGGGGATGAGGC...CCGCCTGCCCAGCAGTGTTAGGGGAGTTTCCGGCTGCTCTGCACACAGTTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACACTTCTCCTGGATGCTaGTCTGGTACTCGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: RGMLARVSERTLWRAGYHTSPGC*SGTRLL
Trigger: CAGAAGCCGAGTACCAGACAAGCATCCAGGAGAAGT...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp GGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTATCTTGTCTAGCGTGTaGACAATTTGGCCGAACTTG +
Preference number: 5 (lower is better)
Translates to: GDVSWLAPLGSSRGPWPPILSSV*TIWPNL
Trigger: CAAGTTCGGCCAAATTGTCAACACGCTAGACAAGAT...AGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp CCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGAGGGGCGCCATGGCTTaGAGGCTGTTGGGATTGCGG +
Preference number: 5 (lower is better)
Translates to: PSFELHVFLVTSRGWHRLRGAMA*RLLGLR
Trigger: CCGCAATCCCAACAGCCTCAAAGCCATGGCGCCCCT...CAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp GGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGAAAAATTCTTCTGTTaGCCCAGTGGTGGCAGGAAT +
Preference number: 5 (lower is better)
Translates to: GDVSWLAPLGSSRGPWPPEKFFC*PSGGRN
Trigger: ATTCCTGCCACCACTGGGCAAACAGAAGAATTTTTC...AGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp AACCTCCTGAGATTAGCCTCCGAGGGGGTGTGCCCGGAGTTGACTCTCTTTCCTCACCAGAAGGTGACCTaGTGTGCCGAGACAGCTGCC +
Preference number: 5 (lower is better)
Translates to: NLLRLASEGVCPELTLFPHQKVT*CAETAA
Trigger: GGCAGCTGTCTCGGCACACAAGGTCACCTTCTGGTG...AGGAAAGAGAGTCAACTCCGGGCACACCCCCTCGGAGGCTAATCTCAGGAGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp GACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTGGCCTTTCTTTTCTCTTATaGGCCAGCATCAGACACCAA +
Preference number: 5 (lower is better)
Translates to: DVSWLAPLGSSRGPWPPGLSFLL*ASIRHQ
Trigger: TTGGTGTCTGATGCTGGCCAATAAGAGAAAAGAAAG...GCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CAA 90 bp CCATCTCCTCGGATCTGGGAAAGGTCCCGAGAGGTAGTCTCCTTGGCTCCCCTTAGCCCCATACCCTGGTaGAGAGCTCCGGTCTGCATA +
Preference number: 5 (lower is better)
Translates to: PSPRIWERSREVVSLAPLSPIPW*RAPVCI
Trigger: TATGCAGACCGGAGCTCTCAACCAGGGTATGGGGCT...AAGGGGAGCCAAGGAGACTACCTCTCGGGACCTTTCCCAGATCCGAGGAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS CCA 90 bp CAGTTGGTGGCCCCTTCAGAAGTGGTCCGGCTGTTGATGGGACAGTaGGTACAGGCCTCATCCCCTTGGTTGGCCTTGAAAGTCCCAGAT +
Preference number: 5 (lower is better)
Translates to: QLVAPSEVVRLLMGQ*VQASSPWLALKVPD
Trigger: ATCTGGGACTTTCAAGGCCAACCAAGGGGATGAGGCCTGTACCCACTGTCCCATCAACAGCCGGACCACTTCTGAAGGGGCCACCAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000465676.1
ENST00000544305.5
CDS CCA 90 bp ACCAGGCCAGCGGCCGAGGAGCCGATGATGAGTGGCAACTTCTCCTaGATGCTTGTCTGGTACTCGGCTTCTGTCATGGTCTGGAAGTAC +
Preference number: 5 (lower is better)
Translates to: TRPAAEEPMMSGNFS*MLVWYSASVMVWKY
Trigger: GTACTTCCAGACCATGACAGAAGCCGAGTACCAGACAAGCATCCAGGAGAAGTTGCCACTCATCATCGGCTCCTCGGCCGCTGGCCTGGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000465676.1
CDS CCA 90 bp TGGGGCCGGTGGAGAGGGGGTGCTAAGGTGACAAGCAGAAGTGGCTaGGCACTTACTCCATCATCATCTGAGACACGACGTCAAAGGAGG +
Preference number: 5 (lower is better)
Translates to: WGRWRGGAKVTSRSG*ALTPSSSETRRQRR
Trigger: CCTCCTTTGACGTCGTGTCTCAGATGATGATGGAGTAAGTGCCCAGCCACTTCTGCTTGTCACCTTAGCACCCCCTCTCCACCGGCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CAA 90 bp CTCCCGGAACAGGTGAGTGACAGACGATGGGCTGTGCTGTGCTGGATGTTCACTCTCCGCACCTCGGTGTaGATTTTCATGACGCGGCCA +
Preference number: 5 (lower is better)
Translates to: LPEQVSDRRWAVLCWMFTLRTSV*IFMTRP
Trigger: TGGCCGCGTCATGAAAATCAACACCGAGGTGCGGAG...AGTGAACATCCAGCACAGCACAGCCCATCGTCTGTCACTCACCTGTTCCGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CTCCCGGAACAGGTGAGTGACAGACGATGGGCTGTGCTGTGCTGGATGTTCACTGAAGTGGTCCGGCTGTaGATGGGACAGTGGGTACAG +
Preference number: 5 (lower is better)
Translates to: LPEQVSDRRWAVLCWMFTEVVRL*MGQWVQ
Trigger: CTGTACCCACTGTCCCATCAACAGCCGGACCACTTC...AGTGAACATCCAGCACAGCACAGCCCATCGTCTGTCACTCACCTGTTCCGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACATGAGGGAGGTCTCATaGACACTGGAAATCACAGCC +
Preference number: 5 (lower is better)
Translates to: RGMLARVSERTLWRAGYHMREVS*TLEITA
Trigger: GGCTGTGATTTCCAGTGTCAATGAGACCTCCCTCAT...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAACTTCTCCTGGATGCTaGTCTGGTACTCGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGTSPGC*SGTRLL
Trigger: CAGAAGCCGAGTACCAGACAAGCATCCAGGAGAAGT...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TTGGTCCCTGCTTCCCTATTGGGACATGATCTATTCCTCACCCTCCAGATCACCTCCAGATCACCCCACTaGGCTGGTGGGGCCGGTGGA +
Preference number: 5 (lower is better)
Translates to: LVPASLLGHDLFLTLQITSRSPH*AGGAGG
Trigger: TCCACCGGCCCCACCAGCCAAGTGGGGTGATCTGGA...GGTGATCTGGAGGGTGAGGAATAGATCATGTCCCAATAGGGAAGCAGGGACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CAA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACTTGTTGCCTGTGCTTTaGACAAGCCAGGGCCAGAAA +
Preference number: 5 (lower is better)
Translates to: RGMLARVSERTLWRAGYHLLPVL*TSQGQK
Trigger: TTTCTGGCCCTGGCTTGTCAAAAGCACAGGCAACAA...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CTAATCCCTTCCTTCCCTTTGCAGCTCAGGCTCCCGGAACAGGTGAGTGACAGACGAGAGGTAGTCTCCTaGGCTCCCCTTCCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: LIPSFPLQLRLPEQVSDRREVVS*APLPQP
Trigger: TGGCTGAGGAAGGGGAGCCAAGGAGACTACCTCTCG...TCTGTCACTCACCTGTTCCGGGAGCCTGAGCTGCAAAGGGAAGGAAGGGATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp GGCCGCTCCGGGGGCAATTCCTTCTCGGGGAGAGGAGTAGCTGGGAGGCATCCTAGAGTCTTCCAGCCTTaGGTACCATCTTCAAACAAC +
Preference number: 5 (lower is better)
Translates to: GRSGGNSFSGRGVAGRHPRVFQP*VPSSNN
Trigger: GTTGTTTGAAGATGGTACCAAAGGCTGGAAGACTCT...AGGATGCCTCCCAGCTACTCCTCTCCCCGAGAAGGAATTGCCCCCGGAGCGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGGCCCTGCAGCTTCCTaGCTGCAGGGAGGGAAATTC +
Preference number: 5 (lower is better)
Translates to: PSFELHVFLVTSRGWHRLGPAAS*LQGGKF
Trigger: GAATTTCCCTCCCTGCAGCAAGGAAGCTGCAGGGCC...CAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CAA 90 bp CCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGTCTGACCCACGGCGGTaGGAACCCCAGCTGTATCAG +
Preference number: 5 (lower is better)
Translates to: PSFELHVFLVTSRGWHRLSDPRR*EPQLYQ
Trigger: CTGATACAGCTGGGGTTCCAACCGCCGTGGGTCAGA...CAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374630.8
CDS-3UTR CAA 90 bp AGGAGCAGGCTGCTACCCTGCGGTCATGACGCACTTTCCCTAGCATCATGTGGTGCTGGTGAGATTTCCTaGGTCACAGCAGTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: RSRLLPCGHDALSLASCGAGEIS*VTAVGS
Trigger: GGACCCCACTGCTGTGACCAAGGAAATCTCACCAGC...ACCACATGATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGCAGCCTGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGTAACAGGGTCAGGGTaGATCTTGGACACAGCTGGT +
Preference number: 5 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGVTGSG*ILDTAG
Trigger: ACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTAC...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS GCA 90 bp TATCCTCCAGACCAGAAAAGTGAGATCCAGAGAGGTCAAGGCACCTaGCTGAGGTCTCACAGTGGGAAGGAGCGGAGCTGGATTGGGAGC +
Preference number: 5 (lower is better)
Translates to: YPPDQKSEIQRGQGT*LRSHSGKERSWIGS
Trigger: GCTCCCAATCCAGCTCCGCTCCTTCCCACTGTGAGACCTCAGGCAGGTGCCTTGACCTCTCTGGATCTCACTTTTCTGGTCTGGAGGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490436.1
CDS CCA 90 bp GTGGTCCGGCTGTTGATGGGACAGTGGGTACAGGCCTCATCCCCTTaGTTGGCCTTGAAAGTCCCAGATGGACAACATGCCCATAGATCC +
Preference number: 5 (lower is better)
Translates to: VVRLLMGQWVQASSP*LALKVPDGQHAHRS
Trigger: GGATCTATGGGCATGTTGTCCATCTGGGACTTTCAAGGCCAACCAAGGGGATGAGGCCTGTACCCACTGTCCCATCAACAGCCGGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465676.1
CDS-3UTR CAA 90 bp AGAGCTTGTAGGTGGCAGGCAGACCTGGGTATCAGTCCACAGGTGACTCCAAAGGGATTCTCCATCCAGTaGGGGAAGGTCTTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: RACRWQADLGISPQVTPKGFSIQ*GKVLVA
Trigger: GGCCACCAAGACCTTCCCCAACTGGATGGAGAATCC...CTTTGGAGTCACCTGTGGACTGATACCCAGGTCTGCCTGCCACCTACAAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CAA 90 bp CCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGGATTCTCCATCCAGTaGGGGAAGGTCTTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: PSFELHVFLVTSRGWHRLGFSIQ*GKVLVA
Trigger: GGCCACCAAGACCTTCCCCAACTGGATGGAGAATCC...CAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp CCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGACAGGCCTCATCCCCTaGGTTGGCCTTGAAAGTCCC +
Preference number: 5 (lower is better)
Translates to: PSFELHVFLVTSRGWHRLTGLIP*VGLESP
Trigger: GGGACTTTCAAGGCCAACCAAGGGGATGAGGCCTGT...CAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp AGAGCTTGTAGGTGGCAGGCAGACCTGGGTATCAGTCCACAGGTGACTCCAAAGGAAGTGGTCCGGCTGTaGATGGGACAGTGGGTACAG +
Preference number: 5 (lower is better)
Translates to: RACRWQADLGISPQVTPKEVVRL*MGQWVQ
Trigger: CTGTACCCACTGTCCCATCAACAGCCGGACCACTTC...CTTTGGAGTCACCTGTGGACTGATACCCAGGTCTGCCTGCCACCTACAAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CAA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCTTGCGGCAGACACAGTaGGTGGCCCCTTCAGAAGTG +
Preference number: 5 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPLRQTQ*VAPSEV
Trigger: CACTTCTGAAGGGGCCACCAACTGTGTCTGCCGCAA...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp CTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTTTGTTGCGGCAGACACAGTaGGTGGCCCCTTCAGAAGTG +
Preference number: 5 (lower is better)
Translates to: LRVSSTPYFMGPNLRLGLLRQTQ*VAPSEV
Trigger: CACTTCTGAAGGGGCCACCAACTGTGTCTGCCGCAA...CAAACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CTCTGCAGACATCAGGGCAGTTTGTTATGGGGGAAGAGTCAAGTGAGGATTTCCTCCAGGATCACGCCATaGGGCTGGTCCGGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: LCRHQGSLLWGKSQVRISSRITP*GWSGWD
Trigger: GTCCCAGCCGGACCAGCCCAATGGCGTGATCCTGGA...GGAAATCCTCACTTGACTCTTCCCCCATAACAAACTGCCCTGATGTCTGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp AGGAGCAGGCTGCTACCCTGCGGTCATGACGCACTTTCCCTAGCATCATGTGGTTGCACGGTGACCGTGTaGGTGGGGCTTTTTATGGCT +
Preference number: 5 (lower is better)
Translates to: RSRLLPCGHDALSLASCGCTVTV*VGLFMA
Trigger: AGCCATAAAAAGCCCCACCAACACGGTCACCGTGCA...ACCACATGATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGCAGCCTGCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGACCTTCCCAGAGGGAGTaGGAGAGAAACTGCTTTTGT +
Preference number: 5 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGPSQRE*ERNCFC
Trigger: ACAAAAGCAGTTTCTCTCCAACTCCCTCTGGGAAGG...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CCCTGGTTGAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGTACCAAGGTCTCCCTaGGAACTTACAGAGAACAGG +
Preference number: 5 (lower is better)
Translates to: PWLRAPVCIAQAGADTSGVPRSP*ELTENR
Trigger: CCTGTTCTCTGTAAGTTCCAAGGGAGACCTTGGTAC...TCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTCAACCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp GCCAGGAAAGGATTAGTAACCAGGCAGCGGGTGGCTCAGAGCTGTGTGCCTGGGTTGTTGCCTGTGCTTTaGACAAGCCAGGGCCAGAAA +
Preference number: 5 (lower is better)
Translates to: ARKGLVTRQRVAQSCVPGLLPVL*TSQGQK
Trigger: TTTCTGGCCCTGGCTTGTCAAAAGCACAGGCAACAA...CCCAGGCACACAGCTCTGAGCCACCCGCTGCCTGGTTACTAATCCTTTCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp AGCCCTGAGTCCCTTAAGTGTCTCCTACTGCCCCGCCACCCGGGTCCCTGCTCTTCCAACTCACTTCCTTaGTTGCCTGTGCTTTTGACA +
Preference number: 5 (lower is better)
Translates to: SPESLKCLLLPRHPGPCSSNSLP*LPVLLT
Trigger: TGTCAAAAGCACAGGCAACAAAGGAAGTGAGTTGGA...AGAGCAGGGACCCGGGTGGCGGGGCAGTAGGAGACACTTAAGGGACTCAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp AGGAGCAGGCTGCTACCCTGCGGTCATGACGCACTTTCCCTAGCATCATGTGGTCAGAGAAAACCAGAGTaGGCTGTGCCTGGGGGTACA +
Preference number: 5 (lower is better)
Translates to: RSRLLPCGHDALSLASCGQRKPE*AVPGGT
Trigger: TGTACCCCCAGGCACAGCCAACTCTGGTTTTCTCTG...ACCACATGATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGCAGCCTGCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp ACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCGTCAATCCGCCTGGCCAGGTGTaGAGTGAACAGGTCTGGACC +
Preference number: 5 (lower is better)
Translates to: TMTAHLTLRPSSECTLVNPPGQV*SEQVWT
Trigger: GGTCCAGACCTGTTCACTCAACACCTGGCCAGGCGG...ATTGACGAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp GCCAGGAAAGGATTAGTAACCAGGCAGCGGGTGGCTCAGAGCTGTGTGCCTGGGAGCAACACCCTGTGGTaGTCCAGTGTTAAGACTCTG +
Preference number: 5 (lower is better)
Translates to: ARKGLVTRQRVAQSCVPGSNTLW*SSVKTL
Trigger: CAGAGTCTTAACACTGGACAACCACAGGGTGTTGCT...CCCAGGCACACAGCTCTGAGCCACCCGCTGCCTGGTTACTAATCCTTTCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTCCTGGCAGCTATGATTATGATTaGGGGGCTGGGCATGACCAA +
Preference number: 5 (lower is better)
Translates to: LSAPSGGQGITVNDPGPGSYDYD*GAGHDQ
Trigger: TTGGTCATGCCCAGCCCCCAAATCATAATCATAGCT...GCCAGGACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTCCTGGCATTGTGTATAAAAAGTaGGGCACGGTGCCTGGCACA +
Preference number: 5 (lower is better)
Translates to: LSAPSGGQGITVNDPGPGIVYKK*GTVPGT
Trigger: TGTGCCAGGCACCGTGCCCAACTTTTTATACACAAT...GCCAGGACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CACAGGCACCTCTGCCGTGTGGCCTCCCAGCTCTGGAAGGCAGTGACTAAGATTGGGTCAGGGTTGATCTaGGACACAGCTGGTGAGATT +
Preference number: 5 (lower is better)
Translates to: HRHLCRVASQLWKAVTKIGSGLI*DTAGEI
Trigger: AATCTCACCAGCTGTGTCCAAGATCAACCCTGACCC...AATCTTAGTCACTGCCTTCCAGAGCTGGGAGGCCACACGGCAGAGGTGCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTCAGTTGGGGAAGGTCTaGGTGGCCGAGTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGQLGKV*VAESKS
Trigger: TGACTTTGACTCGGCCACCAAGACCTTCCCCAACTG...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGCAGTTGGGGAAGGTCTaGGTGGCCGAGTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: PSFELHVFLVTSRGWHRLQLGKV*VAESKS
Trigger: TGACTTTGACTCGGCCACCAAGACCTTCCCCAACTG...CAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGCCTCATCCCCTTGGTaGGCCTTGAAAGTCCCAGAT +
Preference number: 5 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPASSPW*ALKVPD
Trigger: ATCTGGGACTTTCAAGGCCAACCAAGGGGATGAGGC...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp GAGCCAGACTTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACGCGCGGAGGGGATGGTaGTGCAGGGCATGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: EPDFLGSNPGSSIYDLCDARRGW*CRACPG
Trigger: CCCTGGACATGCCCTGCACAACCATCCCCTCCGCGC...GTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAAGTCTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CAA 90 bp GCACTCAGGCCATCATCTATTCTGATTGGTCTGCCCGAGTCTTCGCAGTTGATAGGTGCGTACTGTACATaGTCCCCGCAGCGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: ALRPSSILIGLPESSQLIGAYCT*SPQRVQ
Trigger: CTGCACCCGCTGCGGGGACAATGTACAGTACGCACC...TATCAACTGCGAAGACTCGGGCAGACCAATCAGAATAGATGATGGCCTGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp GTTCCCACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCGATGGAGCTGCCTGGTaGGTGGTGATGTTCACAGAG +
Preference number: 5 (lower is better)
Translates to: VPTMTAHLTLRPSSECTLDGAAW*VVMFTE
Trigger: CTCTGTGAACATCACCACCAACCAGGCAGCTCCATC...GAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGTGGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCATCACCTGCTCAATTTaGACACAGGAGATGTCAATT +
Preference number: 5 (lower is better)
Translates to: LVTSRGWHRLVLPVARGLITCSI*TQEMSI
Trigger: AATTGACATCTCCTGTGTCAAAATTGAGCAGGTGAT...GAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp CTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTATCACCTGCTCAATTTaGACACAGGAGATGTCAATT +
Preference number: 5 (lower is better)
Translates to: LGDVSWLAPLGSSRGPWPITCSI*TQEMSI
Trigger: AATTGACATCTCCTGTGTCAAAATTGAGCAGGTGAT...AGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp CAGCTGGTGAGATTTCCTTGGTCACAGCAGTGGGGTCCGGAGGAGCCAGGTCTGTCCTGCTCAATGGCATaGATTACATCCTGGTTGGTC +
Preference number: 5 (lower is better)
Translates to: QLVRFPWSQQWGPEEPGLSCSMA*ITSWLV
Trigger: GACCAACCAGGATGTAATCAATGCCATTGAGCAGGA...CAGACCTGGCTCCTCCGGACCCCACTGCTGTGACCAAGGAAATCTCACCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp AGAGGCATGCTTGCCCGTGTCTCTGAGCGCACCCTCTGGAGGGCAGGGTATCACGAAAAATTCTTCTGTTaGCCCAGTGGTGGCAGGAAT +
Preference number: 5 (lower is better)
Translates to: RGMLARVSERTLWRAGYHEKFFC*PSGGRN
Trigger: ATTCCTGCCACCACTGGGCAAACAGAAGAATTTTTC...GTGATACCCTGCCCTCCAGAGGGTGCGCTCAGAGACACGGGCAAGCATGCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp GAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTGTACCAAGGTCTCCCTaGGAACTTACAGAGAACAGG +
Preference number: 5 (lower is better)
Translates to: ESSGLHSSGWGRHFRRRSVPRSP*ELTENR
Trigger: CCTGTTCTCTGTAAGTTCCAAGGGAGACCTTGGTAC...ACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTTTGGGGGTGTGCCCGGAGTaGACTCTCTTTCCTGTTATG +
Preference number: 5 (lower is better)
Translates to: LRVSSTPYFMGPNLRLGLGVCPE*TLFPVM
Trigger: CATAACAGGAAAGAGAGTCAACTCCGGGCACACCCC...CAAACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTGGGGTGTGCCCGGAGTaGACTCTCTTTCCTGTTATG +
Preference number: 5 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGGVCPE*TLFPVM
Trigger: CATAACAGGAAAGAGAGTCAACTCCGGGCACACCCC...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGTCTGGACCATAGCCTaGGGGTCTGTGGGGTCTCCC +
Preference number: 5 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKVWTIA*GSVGSP
Trigger: GGGAGACCCCACAGACCCCAAGGCTATGGTCCAGAC...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CAGACGATGGGCTGTGCTGTGCTGGATGTTCACTCTGACCGTGGCGCTTCTAGCAGCAACACCCTGTGGTaGTCCAGTGTTAAGACTCTG +
Preference number: 5 (lower is better)
Translates to: QTMGCAVLDVHSDRGASSSNTLW*SSVKTL
Trigger: CAGAGTCTTAACACTGGACAACCACAGGGTGTTGCT...GCTAGAAGCGCCACGGTCAGAGTGAACATCCAGCACAGCACAGCCCATCGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CAGCTGGTGAGATTTCCTTGGTCACAGCAGTGGGGTCCGGAGGAGCCAGGTCTGAGCTATGATTATGATTaGGGGGCTGGGCATGACCAA +
Preference number: 5 (lower is better)
Translates to: QLVRFPWSQQWGPEEPGLSYDYD*GAGHDQ
Trigger: TTGGTCATGCCCAGCCCCCAAATCATAATCATAGCT...CAGACCTGGCTCCTCCGGACCCCACTGCTGTGACCAAGGAAATCTCACCAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp GCCAGGAAAGGATTAGTAACCAGGCAGCGGGTGGCTCAGAGCTGTGTGCCTGGGATTGTGTATAAAAAGTaGGGCACGGTGCCTGGCACA +
Preference number: 5 (lower is better)
Translates to: ARKGLVTRQRVAQSCVPGIVYKK*GTVPGT
Trigger: TGTGCCAGGCACCGTGCCCAACTTTTTATACACAAT...CCCAGGCACACAGCTCTGAGCCACCCGCTGCCTGGTTACTAATCCTTTCCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTCCTGGCCCTGACCTCCCAACATaGTCAGGAAAACCCATATTT +
Preference number: 5 (lower is better)
Translates to: LSAPSGGQGITVNDPGPGPDLPT*SGKPIF
Trigger: AAATATGGGTTTTCCTGACAATGTTGGGAGGTCAGG...GCCAGGACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TCCCTCAACCTTCCTACCAACCCCCAGTTTGTAGGTGAGAAAACGGAGGCTGAGCTTGACTCAAACACGTaGCACACCTGGTACGTGCGG +
Preference number: 5 (lower is better)
Translates to: SLNLPTNPQFVGEKTEAELDSNT*HTWYVR
Trigger: CCGCACGTACCAGGTGTGCAACGTGTTTGAGTCAAG...CTCAGCCTCCGTTTTCTCACCTACAAACTGGGGGTTGGTAGGAAGGTTGAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CAA 90 bp CACAGAGAAAACCAGAGTTGGCTGTGCCTGGGGGTACATGAGCACTCTAAGACCGATGGAGCTGCCTGGTaGGTGGTGATGTTCACAGAG +
Preference number: 5 (lower is better)
Translates to: HRENQSWLCLGVHEHSKTDGAAW*VVMFTE
Trigger: CTCTGTGAACATCACCACCAACCAGGCAGCTCCATC...GGTCTTAGAGTGCTCATGTACCCCCAGGCACAGCCAACTCTGGTTTTCTCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp GACTTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGTCCAGGATCACGCCATaGGGCTGGTCCGGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: DFLGSNPGSSIYDLCDLGSRITP*GWSGWD
Trigger: GTCCCAGCCGGACCAGCCCAATGGCGTGATCCTGGA...CCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CAA 90 bp CCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGTTTATGGCTGTGGCGTaGTACTCACTGAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: PSFELHVFLVTSRGWHRLFMAVA*YSLSSC
Trigger: GCAGGAGCTCAGTGAGTACAACGCCACAGCCATAAA...CAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CAA 90 bp CACAGAGAAAACCAGAGTTGGCTGTGCCTGGGGGTACATGAGCACTCTAAGACCGCCACTGGTGTAGTGTaGCAGCTTGTCCGTGTACTC +
Preference number: 5 (lower is better)
Translates to: HRENQSWLCLGVHEHSKTATGVV*QLVRVL
Trigger: GAGTACACGGACAAGCTGCAACACTACACCAGTGGC...GGTCTTAGAGTGCTCATGTACCCCCAGGCACAGCCAACTCTGGTTTTCTCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGAGTTGCATGTTTTCTaGGTGACGTCTCGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: PSFELHVFLVTSRGWHRLELHVF*VTSRGW
Trigger: CCAGCCACGAGACGTCACCAAGAAAACATGCAACTC...CAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp CTCCCGGAACAGGTGAGTGACAGACGATGGGCTGTGCTGTGCTGGATGTTCACTTTTATGGCTGTGGCGTaGTACTCACTGAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LPEQVSDRRWAVLCWMFTFMAVA*YSLSSF
Trigger: GAAGGAGCTCAGTGAGTACAACGCCACAGCCATAAA...AGTGAACATCCAGCACAGCACAGCCCATCGTCTGTCACTCACCTGTTCCGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CAGCTGGTGAGATTTCCTTGGTCACAGCAGTGGGGTCCGGAGGAGCCAGGTCTGGAAAAATTCTTCTGTTaGCCCAGTGGTGGCAGGAAT +
Preference number: 5 (lower is better)
Translates to: QLVRFPWSQQWGPEEPGLEKFFC*PSGGRN
Trigger: ATTCCTGCCACCACTGGGCAAACAGAAGAATTTTTC...CAGACCTGGCTCCTCCGGACCCCACTGCTGTGACCAAGGAAATCTCACCAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp AGGAGCAGGCTGCTACCCTGCGGTCATGACGCACTTTCCCTAGCATCATGTGGTGAAGTACTAGATAGATaGGGGCAGGAGAGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: RSRLLPCGHDALSLASCGEVLDR*GQESGK
Trigger: CTTCCCACTCTCCTGCCCCAATCTATCTAGTACTTC...ACCACATGATGCTAGGGAAAGTGCGTCATGACCGCAGGGTAGCAGCCTGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CTGAGCGCACCCTCTGGAGGGCAGGGTATCACAGTGAATGATCCGGGTCCTGGCGGAGTGACCTTTCTTTaGACCTCTGTCATTTTCAAG +
Preference number: 5 (lower is better)
Translates to: LSAPSGGQGITVNDPGPGGVTFL*TSVIFK
Trigger: CTTGAAAATGACAGAGGTCAAAAGAAAGGTCACTCC...GCCAGGACCCGGATCATTCACTGTGATACCCTGCCCTCCAGAGGGTGCGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp AGGCACCTGGCTCTGGAGTTTGCAGCAACACCCTGTGGTTGTCCAGTGTTAAGACAACTCCTCACTGTGTaGGACCATTCTGGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: RHLALEFAATPCGCPVLRQLLTV*DHSGSC
Trigger: GCAGCTGCCAGAATGGTCCAACACAGTGAGGAGTTG...TCTTAACACTGGACAACCACAGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGGAGAGGAAAAGCCGTGTCTaGGTCTGGGTAGCCGGGCTT +
Preference number: 5 (lower is better)
Translates to: CNSATLPGKDVLHPTQKERKSRV*VWVAGL
Trigger: AAGCCCGGCTACCCAGACCAAGACACGGCTTTTCCT...CTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTTCCACCTCTTCCGCATaGGCGATGCAGCTGCCCCGG +
Preference number: 5 (lower is better)
Translates to: LGSNPGSSIYDLCDLGQVSTSSA*AMQLPR
Trigger: CCGGGGCAGCTGCATCGCCAATGCGGAAGAGGTGGA...AACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CAA 90 bp GACTTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGGCCTCGAAGCCTGCTTaGCACATGCAGCGCCCGATG +
Preference number: 5 (lower is better)
Translates to: DFLGSNPGSSIYDLCDLGASKPA*HMQRPM
Trigger: CATCGGGCGCTGCATGTGCAAAGCAGGCTTCGAGGC...CCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CAA 90 bp GGCATTGGAGTAACAGGGTCAGGGTTGATCTTGGACACAGCTGGTGAGATTTCCGCCTCATCCCCTTGGTaGGCCTTGAAAGTCCCAGAT +
Preference number: 5 (lower is better)
Translates to: GIGVTGSGLILDTAGEISASSPW*ALKVPD
Trigger: ATCTGGGACTTTCAAGGCCAACCAAGGGGATGAGGC...GGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CTCTGCAGACATCAGGGCAGTTTGTTATGGGGGAAGAGTCAAGTGAGGATTTCCTTGCGGCAGACACAGTaGGTGGCCCCTTCAGAAGTG +
Preference number: 5 (lower is better)
Translates to: LCRHQGSLLWGKSQVRISLRQTQ*VAPSEV
Trigger: CACTTCTGAAGGGGCCACCAACTGTGTCTGCCGCAA...GGAAATCCTCACTTGACTCTTCCCCCATAACAAACTGCCCTGATGTCTGCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp GAGCCAGACTTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACGGTGCGTACTGTACATaGTCCCCGCAGCGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: EPDFLGSNPGSSIYDLCDGAYCT*SPQRVQ
Trigger: CTGCACCCGCTGCGGGGACAATGTACAGTACGCACC...GTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAAGTCTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CAA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAATCACAGGTGTGCTCTaGGTCACGACACCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKITGVL*VTTPSR
Trigger: CCTGGAGGGTGTCGTGACCAAGAGCACACCTGTGAT...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp AACCTCCTGAGATTAGCCTCCGAGGGGGTGTGCCCGGAGTTGACTCTCTTTCCTTCCTGCTCAATGGCATaGATTACATCCTGGTTGGTC +
Preference number: 5 (lower is better)
Translates to: NLLRLASEGVCPELTLFPSCSMA*ITSWLV
Trigger: GACCAACCAGGATGTAATCAATGCCATTGAGCAGGA...AGGAAAGAGAGTCAACTCCGGGCACACCCCCTCGGAGGCTAATCTCAGGAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp GAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTATCTTGTCTAGCGTGTaGACAATTTGGCCGAACTTG +
Preference number: 5 (lower is better)
Translates to: ESSGLHSSGWGRHFRRRSILSSV*TIWPNL
Trigger: CAAGTTCGGCCAAATTGTCAACACGCTAGACAAGAT...ACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp AGGCACCTGGCTCTGGAGTTTGCAGCAACACCCTGTGGTTGTCCAGTGTTAAGAGAGTTGCATGTTTTCTaGGTGACGTCTCGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: RHLALEFAATPCGCPVLRELHVF*VTSRGW
Trigger: CCAGCCACGAGACGTCACCAAGAAAACATGCAACTC...TCTTAACACTGGACAACCACAGGGTGTTGCTGCAAACTCCAGAGCCAGGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp GCAGCTGGTCCCCATTTCCACGGTGCCCTGGCCTGTGTTTACAAGGCAGCTTTCTTTCCGTCGTTTGAGTaGCATGTTTTCTTGGTGACG +
Preference number: 5 (lower is better)
Translates to: AAGPHFHGALACVYKAAFFPSFE*HVFLVT
Trigger: CGTCACCAAGAAAACATGCAACTCAAACGACGGAAA...GAAAGCTGCCTTGTAAACACAGGCCAGGGCACCGTGGAAATGGGGACCAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCCCTTCCCAGAGGGAGTaGGAGAGAAACTGCTTTTGT +
Preference number: 5 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPPSQRE*ERNCFC
Trigger: ACAAAAGCAGTTTCTCTCCAACTCCCTCTGGGAAGG...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp TTCTCCACCTTAAGTTTGATGGCAGAAGCCATTTTGCAGAAGGCTGGGTCAAGGAGGGAAGAGGCATGCTaGCCCGTGTCTCTGAGCGCA +
Preference number: 5 (lower is better)
Translates to: FSTLSLMAEAILQKAGSRREEAC*PVSLSA
Trigger: TGCGCTCAGAGACACGGGCAAGCATGCCTCTTCCCT...CCTTGACCCAGCCTTCTGCAAAATGGCTTCTGCCATCAAACTTAAGGTGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp GGAAACAGGGTTCTGGGAAACCCTGCCAGACAGCCCCATACCCTGGTTGAGAGCAACTCACTTCCTTTGTaGCCTGTGCTTTTGACAAGC +
Preference number: 5 (lower is better)
Translates to: GNRVLGNPARQPHTLVESNSLPL*PVLLTS
Trigger: GCTTGTCAAAAGCACAGGCAACAAAGGAAGTGAGTT...GCTCTCAACCAGGGTATGGGGCTGTCTGGCAGGGTTTCCCAGAACCCTGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CTCTGCAGACATCAGGGCAGTTTGTTATGGGGGAAGAGTCAAGTGAGGATTTCCGTAAGTGGAAGGCGCTaGGCAACATGGCCTGCCACT +
Preference number: 5 (lower is better)
Translates to: LCRHQGSLLWGKSQVRISVSGRR*ATWPAT
Trigger: AGTGGCAGGCCATGTTGCCAAGCGCCTTCCACTTAC...GGAAATCCTCACTTGACTCTTCCCCCATAACAAACTGCCCTGATGTCTGCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TCCTTCCTCATGGGACTAAGGTGTATAAGTGTTTTGCACAGCCTGCCTCACCCAGTAAGTGGAAGGCGCTaGGCAACATGGCCTGCCACT +
Preference number: 5 (lower is better)
Translates to: SFLMGLRCISVLHSLPHPVSGRR*ATWPAT
Trigger: AGTGGCAGGCCATGTTGCCAAGCGCCTTCCACTTAC...TGGGTGAGGCAGGCTGTGCAAAACACTTATACACCTTAGTCCCATGAGGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CACAGAGAAAACCAGAGTTGGCTGTGCCTGGGGGTACATGAGCACTCTAAGACCTGGCACTTGGGGAGGTaGAGCCAGGAAAGGATTAGT +
Preference number: 5 (lower is better)
Translates to: HRENQSWLCLGVHEHSKTWHLGR*SQERIS
Trigger: ACTAATCCTTTCCTGGCTCAACCTCCCCAAGTGCCA...GGTCTTAGAGTGCTCATGTACCCCCAGGCACAGCCAACTCTGGTTTTCTCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTAGGTGTATAAGTGTTTaGCACAGCCTGCCTCACCCA +
Preference number: 5 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGRCISV*HSLPHP
Trigger: TGGGTGAGGCAGGCTGTGCAAAACACTTATACACCT...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGAGACAGATGGCCTGGTaGGAATCTTCTGGGAATCAC +
Preference number: 5 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGRQMAW*ESSGNH
Trigger: GTGATTCCCAGAAGATTCCAACCAGGCCATCTGTCT...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CCATCTCCTCGGATCTGGGAAAGGTCCCGAGAGGTAGTCTCCTTGGCTCCCCTTAATCTGCGTCTGGGTTaGGGCATCCTATCTGAAAAT +
Preference number: 5 (lower is better)
Translates to: PSPRIWERSREVVSLAPLNLRLG*GILSEN
Trigger: ATTTTCAGATAGGATGCCCAAACCCAGACGCAGATT...AAGGGGAGCCAAGGAGACTACCTCTCGGGACCTTTCCCAGATCCGAGGAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTGTCACGTCTCTGAGTTaGCTAGTCTGTGGAATGGGA +
Preference number: 5 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGVTSLS*LVCGMG
Trigger: TCCCATTCCACAGACTAGCAAACTCAGAGACGTGAC...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp GCACTCAGGCCATCATCTATTCTGATTGGTCTGCCCGAGTCTTCGCAGTTGATAAGCCCCATACCCTGGTaGAGAGCTCCGGTCTGCATA +
Preference number: 5 (lower is better)
Translates to: ALRPSSILIGLPESSQLISPIPW*RAPVCI
Trigger: TATGCAGACCGGAGCTCTCAACCAGGGTATGGGGCT...TATCAACTGCGAAGACTCGGGCAGACCAATCAGAATAGATGATGGCCTGAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TTCTCCACCTTAAGTTTGATGGCAGAAGCCATTTTGCAGAAGGCTGGGTCAAGGACAGGCCTCATCCCCTaGGTTGGCCTTGAAAGTCCC +
Preference number: 5 (lower is better)
Translates to: FSTLSLMAEAILQKAGSRTGLIP*VGLESP
Trigger: GGGACTTTCAAGGCCAACCAAGGGGATGAGGCCTGT...CCTTGACCCAGCCTTCTGCAAAATGGCTTCTGCCATCAAACTTAAGGTGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp ATGGAGGTTAAGATCACAAGCTGGAGCCAGACTTCTTGGGTTCAAATCCTGGCTGAAGTGGTCCGGCTGTaGATGGGACAGTGGGTACAG +
Preference number: 5 (lower is better)
Translates to: MEVKITSWSQTSWVQILAEVVRL*MGQWVQ
Trigger: CTGTACCCACTGTCCCATCAACAGCCGGACCACTTC...AGCCAGGATTTGAACCCAAGAAGTCTGGCTCCAGCTTGTGATCTTAACCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CAA 90 bp GGAGAATGTCCCTTTGGGAGAGAAGCACGTGTGTTAGGGAAATATGCGGGTGAAGATGGAGCTGCCTGGTaGGTGGTGATGTTCACAGAG +
Preference number: 5 (lower is better)
Translates to: GECPFGREARVLGKYAGEDGAAW*VVMFTE
Trigger: CTCTGTGAACATCACCACCAACCAGGCAGCTCCATC...TTCACCCGCATATTTCCCTAACACACGTGCTTCTCTCCCAAAGGGACATTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CAA 90 bp GCACTCAGGCCATCATCTATTCTGATTGGTCTGCCCGAGTCTTCGCAGTTGATATGCACGGTGACCGTGTaGGTGGGGCTTTTTATGGCT +
Preference number: 5 (lower is better)
Translates to: ALRPSSILIGLPESSQLICTVTV*VGLFMA
Trigger: AGCCATAAAAAGCCCCACCAACACGGTCACCGTGCA...TATCAACTGCGAAGACTCGGGCAGACCAATCAGAATAGATGATGGCCTGAGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp GGAGAATGTCCCTTTGGGAGAGAAGCACGTGTGTTAGGGAAATATGCGGGTGAAGCCACTGGTGTAGTGTaGCAGCTTGTCCGTGTACTC +
Preference number: 5 (lower is better)
Translates to: GECPFGREARVLGKYAGEATGVV*QLVRVL
Trigger: GAGTACACGGACAAGCTGCAACACTACACCAGTGGC...TTCACCCGCATATTTCCCTAACACACGTGCTTCTCTCCCAAAGGGACATTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CAA 90 bp GAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGGTTCTTCCCTCCTGCTCAATGGCATaGATTACATCCTGGTTGGTC +
Preference number: 5 (lower is better)
Translates to: ELHVFLVTSRGWHRLVLPSCSMA*ITSWLV
Trigger: GACCAACCAGGATGTAATCAATGCCATTGAGCAGGA...GGGAAGAACCAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCACAATTTGGCCGAACTaGGGCCGGTGGTTGCGGTCC +
Preference number: 5 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLTIWPN*GRWLRS
Trigger: GGACCGCAACCACCGGCCCAAGTTCGGCCAAATTGT...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGGGAGAGAAACTGCTTTaGTCTCCGATTGGACACATC +
Preference number: 5 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGGEKLL*SPIGHI
Trigger: GATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCC...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CAGACGATGGGCTGTGCTGTGCTGGATGTTCACTCTGACCGTGGCGCTTCTAGCTATAAAATCTCGCCCTaGGTGTATTGCCTAAGTCAG +
Preference number: 5 (lower is better)
Translates to: QTMGCAVLDVHSDRGASSYKISP*VYCLSQ
Trigger: CTGACTTAGGCAATACACCAAGGGCGAGATTTTATA...GCTAGAAGCGCCACGGTCAGAGTGAACATCCAGCACAGCACAGCCCATCGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp GAGAGCTCCGGTCTGCATAGCTCAGGCTGGGGCAGACACTTCAGGAGAAGGAGTAGTATTCAGCGATTATaGCAATCCCTGTGGTTCCAA +
Preference number: 5 (lower is better)
Translates to: ESSGLHSSGWGRHFRRRSSIQRL*QSLWFQ
Trigger: TTGGAACCACAGGGATTGCAATAATCGCTGAATACT...ACTCCTTCTCCTGAAGTGTCTGCCCCAGCCTGAGCTATGCAGACCGGAGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTTTGAGACATCAGGGCAGTTaGTTATGGGGGAAGAGTCAA +
Preference number: 5 (lower is better)
Translates to: LRVSSTPYFMGPNLRLGLRHQGS*LWGKSQ
Trigger: TTGACTCTTCCCCCATAACAAACTGCCCTGATGTCT...CAAACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp GCACTCAGGCCATCATCTATTCTGATTGGTCTGCCCGAGTCTTCGCAGTTGATACCGGGGATCTGGGATTaGACTGGCAAAGGATCTGAC +
Preference number: 5 (lower is better)
Translates to: ALRPSSILIGLPESSQLIPGIWD*TGKGSD
Trigger: GTCAGATCCTTTGCCAGTCAAATCCCAGATCCCCGG...TATCAACTGCGAAGACTCGGGCAGACCAATCAGAATAGATGATGGCCTGAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCGGATTCTCCATCCAGTaGGGGAAGGTCTTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLGFSIQ*GKVLVA
Trigger: GGCCACCAAGACCTTCCCCAACTGGATGGAGAATCC...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTCGGATTCTCCATCCAGTaGGGGAAGGTCTTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: WVQILALVYMTSVTLGKFGFSIQ*GKVLVA
Trigger: GGCCACCAAGACCTTCCCCAACTGGATGGAGAATCC...GAACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CAA 90 bp TGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTCCTCCGCACCTCGGTGTaGATTTTCATGACGCGGCCA +
Preference number: 5 (lower is better)
Translates to: WVQILALVYMTSVTLGKFLRTSV*IFMTRP
Trigger: TGGCCGCGTCATGAAAATCAACACCGAGGTGCGGAG...GAACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CAA 90 bp GACTTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGACAGGCCTCATCCCCTaGGTTGGCCTTGAAAGTCCC +
Preference number: 5 (lower is better)
Translates to: DFLGSNPGSSIYDLCDLGTGLIP*VGLESP
Trigger: GGGACTTTCAAGGCCAACCAAGGGGATGAGGCCTGT...CCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CAA 90 bp GAGCCAGACTTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACTTGCGGCAGACACAGTaGGTGGCCCCTTCAGAAGTG +
Preference number: 5 (lower is better)
Translates to: EPDFLGSNPGSSIYDLCDLRQTQ*VAPSEV
Trigger: CACTTCTGAAGGGGCCACCAACTGTGTCTGCCGCAA...GTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAAGTCTGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CAA 90 bp TTCTCCACCTTAAGTTTGATGGCAGAAGCCATTTTGCAGAAGGCTGGGTCAAGGGCCACTGGTGTAGTGTaGCAGCTTGTCCGTGTACTC +
Preference number: 5 (lower is better)
Translates to: FSTLSLMAEAILQKAGSRATGVV*QLVRVL
Trigger: GAGTACACGGACAAGCTGCAACACTACACCAGTGGC...CCTTGACCCAGCCTTCTGCAAAATGGCTTCTGCCATCAAACTTAAGGTGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CACAGGCACCTCTGCCGTGTGGCCTCCCAGCTCTGGAAGGCAGTGACTAAGATTATCACCTGCTCAATTTaGACACAGGAGATGTCAATT +
Preference number: 5 (lower is better)
Translates to: HRHLCRVASQLWKAVTKIITCSI*TQEMSI
Trigger: AATTGACATCTCCTGTGTCAAAATTGAGCAGGTGAT...AATCTTAGTCACTGCCTTCCAGAGCTGGGAGGCCACACGGCAGAGGTGCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp GCACGTGTGTTAGGGAAATATGCGGGTGAAGGGGTCCTGTGCCTGGTAGAGAGCTGCGTGGCTAATTTTTaGCATTTTAGTAGAGACGGG +
Preference number: 5 (lower is better)
Translates to: ARVLGKYAGEGVLCLVESCVANF*HFSRDG
Trigger: CCCGTCTCTACTAAAATGCAAAAAATTAGCCACGCA...GCTCTCTACCAGGCACAGGACCCCTTCACCCGCATATTTCCCTAACACACGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS-3UTR CAA 90 bp CCGTCGTTTGAGTTGCATGTTTTCTTGGTGACGTCTCGTGGCTGGCACCGCTTGTGCTTTTGTCTCCGATaGGACACATCGCATGAATCT +
Preference number: 5 (lower is better)
Translates to: PSFELHVFLVTSRGWHRLCFCLR*DTSHES
Trigger: AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCA...CAAGCGGTGCCAGCCACGAGACGTCACCAAGAAAACATGCAACTCAAACGACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000374632.7
CDS-3UTR CAA 90 bp CAGGAGGTGGGAAGGAAGGACTACAGACAGATGGCCTGGTTGGAATCTTCTGGGAACTCACTTCCTTTGTaGCCTGTGCTTTTGACAAGC +
Preference number: 5 (lower is better)
Translates to: QEVGRKDYRQMAWLESSGNSLPL*PVLLTS
Trigger: GCTTGTCAAAAGCACAGGCAACAAAGGAAGTGAGTT...CCCAGAAGATTCCAACCAGGCCATCTGTCTGTAGTCCTTCCTTCCCACCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAGGAGAGGTGTATAAGTGTTTaGCACAGCCTGCCTCACCCA +
Preference number: 5 (lower is better)
Translates to: CNSATLPGKDVLHPTQKERCISV*HSLPHP
Trigger: TGGGTGAGGCAGGCTGTGCAAAACACTTATACACCT...CTCCTTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp AACCTCCTGAGATTAGCCTCCGAGGGGGTGTGCCCGGAGTTGACTCTCTTTCCTGGAGTGACCTTTCTTTaGACCTCTGTCATTTTCAAG +
Preference number: 5 (lower is better)
Translates to: NLLRLASEGVCPELTLFPGVTFL*TSVIFK
Trigger: CTTGAAAATGACAGAGGTCAAAAGAAAGGTCACTCC...AGGAAAGAGAGTCAACTCCGGGCACACCCCCTCGGAGGCTAATCTCAGGAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TTCTCCACCTTAAGTTTGATGGCAGAAGCCATTTTGCAGAAGGCTGGGTCAAGGCAACTCCTCACTGTGTaGGACCATTCTGGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: FSTLSLMAEAILQKAGSRQLLTV*DHSGSC
Trigger: GCAGCTGCCAGAATGGTCCAACACAGTGAGGAGTTG...CCTTGACCCAGCCTTCTGCAAAATGGCTTCTGCCATCAAACTTAAGGTGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TCTGCTACTTATGTACCTGCAGGGGCTCACCCTGATTCCCAGGGCATCGAAGGCTTCTCCACCTTAAGTTaGATGGCAGAAGCCATTTTG +
Preference number: 5 (lower is better)
Translates to: SATYVPAGAHPDSQGIEGFSTLS*MAEAIL
Trigger: CAAAATGGCTTCTGCCATCAAACTTAAGGTGGAGAA...GCCTTCGATGCCCTGGGAATCAGGGTGAGCCCCTGCAGGTACATAAGTAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CCATCTCCTCGGATCTGGGAAAGGTCCCGAGAGGTAGTCTCCTTGGCTCCCCTTGGATTAGGCAAGACATaGTGTATAAAAAGTTGGGCA +
Preference number: 5 (lower is better)
Translates to: PSPRIWERSREVVSLAPLGLGKT*CIKSWA
Trigger: TGCCCAACTTTTTATACACAATGTCTTGCCTAATCC...AAGGGGAGCCAAGGAGACTACCTCTCGGGACCTTTCCCAGATCCGAGGAGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TCCTTCCTCATGGGACTAAGGTGTATAAGTGTTTTGCACAGCCTGCCTCACCCAGGGTCAGGGTTGATCTaGGACACAGCTGGTGAGATT +
Preference number: 5 (lower is better)
Translates to: SFLMGLRCISVLHSLPHPGSGLI*DTAGEI
Trigger: AATCTCACCAGCTGTGTCCAAGATCAACCCTGACCC...TGGGTGAGGCAGGCTGTGCAAAACACTTATACACCTTAGTCCCATGAGGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTCCAGTTGGGGAAGGTCTaGGTGGCCGAGTCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: WVQILALVYMTSVTLGKFQLGKV*VAESKS
Trigger: TGACTTTGACTCGGCCACCAAGACCTTCCCCAACTG...GAACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CAA 90 bp TGCCAAGGTGCATCTGTAACTCAGATCCAAGGGATGGAGCTTTTCTTAGTATCTACAGGCCTCATCCCCTaGGTTGGCCTTGAAAGTCCC +
Preference number: 5 (lower is better)
Translates to: CQGASVTQIQGMELFLVSTGLIP*VGLESP
Trigger: GGGACTTTCAAGGCCAACCAAGGGGATGAGGCCTGT...AGATACTAAGAAAAGCTCCATCCCTTGGATCTGAGTTACAGATGCACCTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAATGAGGGAGGTCTCATaGACACTGGAAATCACAGCC +
Preference number: 5 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKMREVS*TLEITA
Trigger: GGCTGTGATTTCCAGTGTCAATGAGACCTCCCTCAT...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTCGATGGAGCTGCCTGGTaGGTGGTGATGTTCACAGAG +
Preference number: 5 (lower is better)
Translates to: WVQILALVYMTSVTLGKFDGAAW*VVMFTE
Trigger: CTCTGTGAACATCACCACCAACCAGGCAGCTCCATC...GAACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CAA 90 bp TGCCAAGGTGCATCTGTAACTCAGATCCAAGGGATGGAGCTTTTCTTAGTATCTGAGGTGAAGCCGGCATaGGCGAAGCTCTCCTTGTAC +
Preference number: 5 (lower is better)
Translates to: CQGASVTQIQGMELFLVSEVKPA*AKLSLY
Trigger: GTACAAGGAGAGCTTCGCCAATGCCGGCTTCACCTC...AGATACTAAGAAAAGCTCCATCCCTTGGATCTGAGTTACAGATGCACCTTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAATTTATGGCTGTGGCGTaGTACTCACTGAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKFMAVA*YSLSSF
Trigger: GAAGGAGCTCAGTGAGTACAACGCCACAGCCATAAA...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CACAGAGAAAACCAGAGTTGGCTGTGCCTGGGGGTACATGAGCACTCTAAGACCTGCTTTTGTCTCCGATaGGACACATCGCATGAATCT +
Preference number: 5 (lower is better)
Translates to: HRENQSWLCLGVHEHSKTCFCLR*DTSHES
Trigger: AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCA...GGTCTTAGAGTGCTCATGTACCCCCAGGCACAGCCAACTCTGGTTTTCTCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TTCCTGAGGGTCAGCTCTACCCCCTACTTCATGGGTCCTAATCTGCGTCTGGGTTATAAAATCTCGCCCTaGGTGTATTGCCTAAGTCAG +
Preference number: 5 (lower is better)
Translates to: FLRVSSTPYFMGPNLRLGYKISP*VYCLSQ
Trigger: CTGACTTAGGCAATACACCAAGGGCGAGATTTTATA...ACCCAGACGCAGATTAGGACCCATGAAGTAGGGGGTAGAGCTGACCCTCAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TCTGCTACTTATGTACCTGCAGGGGCTCACCCTGATTCCCAGGGCATCGAAGGCGGATTAGGCAAGACATaGTGTATAAAAAGTTGGGCA +
Preference number: 5 (lower is better)
Translates to: SATYVPAGAHPDSQGIEGGLGKT*CIKSWA
Trigger: TGCCCAACTTTTTATACACAATGTCTTGCCTAATCC...GCCTTCGATGCCCTGGGAATCAGGGTGAGCCCCTGCAGGTACATAAGTAGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAACTTGACTCAAACACGTaGCACACCTGGTACGTGCGG +
Preference number: 5 (lower is better)
Translates to: FLGSNPGSSIYDLCDLGQLDSNT*HTWYVR
Trigger: CCGCACGTACCAGGTGTGCAACGTGTTTGAGTCAAG...TTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CAA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCTCCCCTTGGTTGGCCTaGAAAGTCCCAGATGGACAA +
Preference number: 5 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLSPWLA*KVPDGQ
Trigger: TTGTCCATCTGGGACTTTCAAGGCCAACCAAGGGGA...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTCTCCCCTTGGTTGGCCTaGAAAGTCCCAGATGGACAA +
Preference number: 5 (lower is better)
Translates to: WVQILALVYMTSVTLGKFSPWLA*KVPDGQ
Trigger: TTGTCCATCTGGGACTTTCAAGGCCAACCAAGGGGA...GAACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CAA 90 bp TTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTTGGGCAAGTTGCCTCATCCCCTTGGTaGGCCTTGAAAGTCCCAGAT +
Preference number: 5 (lower is better)
Translates to: LGSNPGSSIYDLCDLGQVASSPW*ALKVPD
Trigger: ATCTGGGACTTTCAAGGCCAACCAAGGGGATGAGGC...AACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CAA 90 bp ATGGAGGTTAAGATCACAAGCTGGAGCCAGACTTCTTGGGTTCAAATCCTGGCTATGAGGGAGGTCTCATaGACACTGGAAATCACAGCC +
Preference number: 5 (lower is better)
Translates to: MEVKITSWSQTSWVQILAMREVS*TLEITA
Trigger: GGCTGTGATTTCCAGTGTCAATGAGACCTCCCTCAT...AGCCAGGATTTGAACCCAAGAAGTCTGGCTCCAGCTTGTGATCTTAACCTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CAA 90 bp GGCATTGGAGTAACAGGGTCAGGGTTGATCTTGGACACAGCTGGTGAGATTTCCATCTTGTCTAGCGTGTaGACAATTTGGCCGAACTTG +
Preference number: 5 (lower is better)
Translates to: GIGVTGSGLILDTAGEISILSSV*TIWPNL
Trigger: CAAGTTCGGCCAAATTGTCAACACGCTAGACAAGAT...GGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp GGAGACATTGGAAACAGAAAAATCCAAAGCTCATGGCCTTGCTCTGCTCCTTCCCTCGCCCTTGGTGTATaGCCTAAGTCAGTAAGCAGA +
Preference number: 5 (lower is better)
Translates to: GDIGNRKIQSSWPCSAPSLALGV*PKSVSR
Trigger: TCTGCTTACTGACTTAGGCAATACACCAAGGGCGAG...GGAAGGAGCAGAGCAAGGCCATGAGCTTTGGATTTTTCTGTTTCCAATGTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp GGCATTGGAGTAACAGGGTCAGGGTTGATCTTGGACACAGCTGGTGAGATTTCCAGAGTCTTCCAGCCTTaGGTACCATCTTCAAACAAC +
Preference number: 5 (lower is better)
Translates to: GIGVTGSGLILDTAGEISRVFQP*VPSSNN
Trigger: GTTGTTTGAAGATGGTACCAAAGGCTGGAAGACTCT...GGAAATCTCACCAGCTGTGTCCAAGATCAACCCTGACCCTGTTACTCCAATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp AGGGAGTTGGAGAGAAACTGCTTTTGTCTCCGATTGGACACATCGCATGAATCTATGGCAGAAGCCATTTaGCAGAAGGCTGGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: RELERNCFCLRLDTSHESMAEAI*QKAGSR
Trigger: CCTTGACCCAGCCTTCTGCAAAATGGCTTCTGCCAT...AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp CACAGAGAAAACCAGAGTTGGCTGTGCCTGGGGGTACATGAGCACTCTAAGACCTTCTCCACCTTAAGTTaGATGGCAGAAGCCATTTTG +
Preference number: 5 (lower is better)
Translates to: HRENQSWLCLGVHEHSKTFSTLS*MAEAIL
Trigger: CAAAATGGCTTCTGCCATCAAACTTAAGGTGGAGAA...GGTCTTAGAGTGCTCATGTACCCCCAGGCACAGCCAACTCTGGTTTTCTCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp ACTATGACAGCTCACCTGACACTCAGACCCTCTTCCGAGTGCACTCTCGTCAATCCTGACCTCCCAACATaGTCAGGAAAACCCATATTT +
Preference number: 5 (lower is better)
Translates to: TMTAHLTLRPSSECTLVNPDLPT*SGKPIF
Trigger: AAATATGGGTTTTCCTGACAATGTTGGGAGGTCAGG...ATTGACGAGAGTGCACTCGGAAGAGGGTCTGAGTGTCAGGTGAGCTGTCATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp AGCCAGACTTCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCCTGGAGCCAGACTTCTaGGGTTCAAATCCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: SQTSWVQILALVYMTSVTLEPDF*GSNPGS
Trigger: AGAGCCAGGATTTGAACCCAAGAAGTCTGGCTCCAG...GGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGAAGTCTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5
CDS-3UTR CAA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCGAAGTACTAGATAGATaGGGGCAGGAGAGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLEVLDR*GQESGK
Trigger: CTTCCCACTCTCCTGCCCCAATCTATCTAGTACTTC...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp AAAATCCAGAAATGTGCATATAAAATCTCGCCCTTGGTGTATTGCCTAAGTCAGCACCAGAAGGTGACCTaGTGTGCCGAGACAGCTGCC +
Preference number: 5 (lower is better)
Translates to: KIQKCAYKISPLVYCLSQHQKVT*CAETAA
Trigger: GGCAGCTGTCTCGGCACACAAGGTCACCTTCTGGTG...CTGACTTAGGCAATACACCAAGGGCGAGATTTTATATGCACATTTCTGGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp AGGGAGTTGGAGAGAAACTGCTTTTGTCTCCGATTGGACACATCGCATGAATCTAGACAGATGGCCTGGTaGGAATCTTCTGGGAATCAC +
Preference number: 5 (lower is better)
Translates to: RELERNCFCLRLDTSHESRQMAW*ESSGNH
Trigger: GTGATTCCCAGAAGATTCCAACCAGGCCATCTGTCT...AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TTCTCCACCTTAAGTTTGATGGCAGAAGCCATTTTGCAGAAGGCTGGGTCAAGGAGACATCAGGGCAGTTaGTTATGGGGGAAGAGTCAA +
Preference number: 5 (lower is better)
Translates to: FSTLSLMAEAILQKAGSRRHQGS*LWGKSQ
Trigger: TTGACTCTTCCCCCATAACAAACTGCCCTGATGTCT...CCTTGACCCAGCCTTCTGCAAAATGGCTTCTGCCATCAAACTTAAGGTGGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAAATCTGCGTCTGGGTTaGGGCATCCTATCTGAAAAT +
Preference number: 5 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKNLRLG*GILSEN
Trigger: ATTTTCAGATAGGATGCCCAAACCCAGACGCAGATT...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp AAAATCCAGAAATGTGCATATAAAATCTCGCCCTTGGTGTATTGCCTAAGTCAGTCTGACCCACGGCGGTaGGAACCCCAGCTGTATCAG +
Preference number: 5 (lower is better)
Translates to: KIQKCAYKISPLVYCLSQSDPRR*EPQLYQ
Trigger: CTGATACAGCTGGGGTTCCAACCGCCGTGGGTCAGA...CTGACTTAGGCAATACACCAAGGGCGAGATTTTATATGCACATTTCTGGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp AAAATCCAGAAATGTGCATATAAAATCTCGCCCTTGGTGTATTGCCTAAGTCAGATCACAGGTGTGCTCTaGGTCACGACACCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: KIQKCAYKISPLVYCLSQITGVL*VTTPSR
Trigger: CCTGGAGGGTGTCGTGACCAAGAGCACACCTGTGAT...CTGACTTAGGCAATACACCAAGGGCGAGATTTTATATGCACATTTCTGGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TTCTCCACCTTAAGTTTGATGGCAGAAGCCATTTTGCAGAAGGCTGGGTCAAGGTTTCCGTCGTTTGAGTaGCATGTTTTCTTGGTGACG +
Preference number: 5 (lower is better)
Translates to: FSTLSLMAEAILQKAGSRFPSFE*HVFLVT
Trigger: CGTCACCAAGAAAACATGCAACTCAAACGACGGAAA...CCTTGACCCAGCCTTCTGCAAAATGGCTTCTGCCATCAAACTTAAGGTGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp GGAGACATTGGAAACAGAAAAATCCAAAGCTCATGGCCTTGCTCTGCTCCTTCCTGCTTTTGTCTCCGATaGGACACATCGCATGAATCT +
Preference number: 5 (lower is better)
Translates to: GDIGNRKIQSSWPCSAPSCFCLR*DTSHES
Trigger: AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCA...GGAAGGAGCAGAGCAAGGCCATGAGCTTTGGATTTTTCTGTTTCCAATGTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TGCATGCAATTCTGCCACTCTACCAGGGAAAGACGTTCTGCACCCCACTCAAAAAGTATTCAGCGATTATaGCAATCCCTGTGGTTCCAA +
Preference number: 5 (lower is better)
Translates to: CMQFCHSTRERRSAPHSKSIQRL*QSLWFQ
Trigger: TTGGAACCACAGGGATTGCAATAATCGCTGAATACT...TTTTGAGTGGGGTGCAGAACGTCTTTCCCTGGTAGAGTGGCAGAATTGCATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp AAAATCCAGAAATGTGCATATAAAATCTCGCCCTTGGTGTATTGCCTAAGTCAGCTTGACTCAAACACGTaGCACACCTGGTACGTGCGG +
Preference number: 5 (lower is better)
Translates to: KIQKCAYKISPLVYCLSQLDSNT*HTWYVR
Trigger: CCGCACGTACCAGGTGTGCAACGTGTTTGAGTCAAG...CTGACTTAGGCAATACACCAAGGGCGAGATTTTATATGCACATTTCTGGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp AGTATTCAGCGATTATTGCAATCCCTGTGGTTCCAACCTCCTGAGATTAGCCTCCTTTCTTTTCTCTTATaGGCCAGCATCAGACACCAA +
Preference number: 5 (lower is better)
Translates to: SIQRLLQSLWFQPPEISLLSFLL*ASIRHQ
Trigger: TTGGTGTCTGATGCTGGCCAATAAGAGAAAAGAAAG...GAGGCTAATCTCAGGAGGTTGGAACCACAGGGATTGCAATAATCGCTGAATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp AGGGAGTTGGAGAGAAACTGCTTTTGTCTCCGATTGGACACATCGCATGAATCTGTGGTACCCTGTCTTTaGAATGCATTTACGTTATCT +
Preference number: 5 (lower is better)
Translates to: RELERNCFCLRLDTSHESVVPCL*NAFTLS
Trigger: AGATAACGTAAATGCATTCAAAAGACAGGGTACCAC...AGATTCATGCGATGTGTCCAATCGGAGACAAAAGCAGTTTCTCTCCAACTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS-3UTR CAA 90 bp TGCCAAGGTGCATCTGTAACTCAGATCCAAGGGATGGAGCTTTTCTTAGTATCTGTGGTACCCTGTCTTTaGAATGCATTTACGTTATCT +
Preference number: 5 (lower is better)
Translates to: CQGASVTQIQGMELFLVSVVPCL*NAFTLS
Trigger: AGATAACGTAAATGCATTCAAAAGACAGGGTACCAC...AGATACTAAGAAAAGCTCCATCCCTTGGATCTGAGTTACAGATGCACCTTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374630.8
ENST00000400191.7
CDS CAA 90 bp ATGCGTGGCTCGGTCAGGCCTAGCTGGCGTGGTGCGTACTGTACATaGTCCCCGCAGCGGGTGCAGGCACCCCGGCCCGAGCCACAGCTC +
Preference number: 6 (lower is better)
Translates to: MRGSVRPSWRGAYCT*SPQRVQAPRPEPQL
Trigger: GAGCTGTGGCTCGGGCCGGGGTGCCTGCACCCGCTGCGGGGACAATGTACAGTACGCACCACGCCAGCTAGGCCTGACCGAGCCACGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000465676.1
ENST00000544305.5
CDS CCA 72 bp TCGTGGCTGGCACCGCTTGGTTCTTCCCGTGGCCCGTaGCCTCCTGGCGAGTGGCTGGCCCTCCACAGACTG +
Preference number: 6 (lower is better)
Translates to: SWLAPLGSSRGP*PPGEWLALHRL
Trigger: CAGTCTGTGGAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCCAGCCACGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400191.7
CDS CAA 72 bp TCGGTCAGGCCTAGCTGGCGTGGTGCGTACTGTACATaGTCCCCGCAGCGGGTGCAGGCACCCCGGCCCGAG +
Preference number: 6 (lower is better)
Translates to: SVRPSWRGAYCT*SPQRVQAPRPE
Trigger: CTCGGGCCGGGGTGCCTGCACCCGCTGCGGGGACAATGTACAGTACGCACCACGCCAGCTAGGCCTGACCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000465676.1
ENST00000544305.5
CDS GCA 72 bp GGCGTGGTGCGTACTGTACATTGTCCCCGCAGCGGGTaGAGGCACCCCGGCCCGAGCCACAGCTCTTGCAGA +
Preference number: 6 (lower is better)
Translates to: GVVRTVHCPRSG*RHPGPSHSSCR
Trigger: TCTGCAAGAGCTGTGGCTCGGGCCGGGGTGCCTGCACCCGCTGCGGGGACAATGTACAGTACGCACCACGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000465676.1
ENST00000544305.5
CDS GCA 72 bp TGGCGATGCAGCTGCCCCGGGCAGCCACCAGCGATGTaGTCTCAGCCCCCGACAGGGTTTCCTGGAAGATGG +
Preference number: 6 (lower is better)
Translates to: WRCSCPGQPPAM*SQPPTGFPGRW
Trigger: CCATCTTCCAGGAAACCCTGTCGGGGGCTGAGAGCACATCGCTGGTGGCTGCCCGGGGCAGCTGCATCGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000544305.5
CDS CCA 72 bp GGCACCGCTTGGTTCTTCCCGTGGCCCGTGGCCTCCTaGCGAGTGGCTGGCCCTCCACAGACTGAATCTGGT +
Preference number: 6 (lower is better)
Translates to: GTAWFFPWPVAS*RVAGPPQTESG
Trigger: ACCAGATTCAGTCTGTGGAGGGCCAGCCACTCGCCAGGAGGCCACGGGCCACGGGAAGAACCAAGCGGTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400191.7
CDS TCA 72 bp TGCAGGCACCCCGGCCCGAGCCACAGCTCTTGCAGATaGTGTTGTAGACGAGGTCCTCTCGGCCTCCGGAGT +
Preference number: 6 (lower is better)
Translates to: CRHPGPSHSSCR*CCRRGPLGLRS
Trigger: ACTCCGGAGGCCGAGAGGACCTCGTCTACAACATCATCTGCAAGAGCTGTGGCTCGGGCCGGGGTGCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000465676.1
ENST00000544305.5
CDS CAA 72 bp CTGCGGGACACAGGTCCGAAGCTCCGCACCTCGGTGTaGATTTTCATGACGCGGCCACCCAGGTCCACCTGG +
Preference number: 6 (lower is better)
Translates to: LRDTGPKLRTSV*IFMTRPPRSTW
Trigger: CCAGGTGGACCTGGGTGGCCGCGTCATGAAAATCAACACCGAGGTGCGGAGCTTCGGACCTGTGTCCCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000544305.5
CDS CCA 72 bp ACCAGCGATGTGCTCTCAGCCCCCGACAGGGTTTCCTaGAAGATGGCGCCATTCTGGATGATGCGGGGGCAC +
Preference number: 6 (lower is better)
Translates to: TSDVLSAPDRVS*KMAPFWMMRGH
Trigger: GTGCCCCCGCATCATCCAGAATGGCGCCATCTTCCAGGAAACCCTGTCGGGGGCTGAGAGCACATCGCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000544305.5
CDS TCA 72 bp CCGACAGGGTTTCCTGGAAGATGGCGCCATTCTGGATaGTGCGGGGGCACTTGCGGTAGAAGACACGCACGG +
Preference number: 6 (lower is better)
Translates to: PTGFPGRWRHSG*CGGTCGRRHAR
Trigger: CCGTGCGTGTCTTCTACCGCAAGTGCCCCCGCATCATCCAGAATGGCGCCATCTTCCAGGAAACCCTGTCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000544305.5
CDS TCA 72 bp CACGACAGGGTAATGCTGTCCACGGTGCGGCTCACCTaGTGCATGATGGACACTGCCGATGGAGCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: HDRVMLSTVRLT*CMMDTADGAAW
Trigger: CCAGGCAGCTCCATCGGCAGTGTCCATCATGCATCAGGTGAGCCGCACCGTGGACAGCATTACCCTGTCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000465676.1
ENST00000490436.1
ENST00000544305.5
CDS CCA 72 bp TCACGCACCGAAAACTTCATCTCCACGTGGATGCGGTaGGCGCCACGGCGCCGGATAAACTTGGTCCGTAGC +
Preference number: 6 (lower is better)
Translates to: SRTENFISTWMR*APRRRINLVRS
Trigger: GCTACGGACCAAGTTTATCCGGCGCCGTGGCGCCCACCGCATCCACGTGGAGATGAAGTTTTCGGTGCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000544305.5
CDS CCA 72 bp GAAGACCAGGCCAGCGGCCGAGGAGCCGATGATGAGTaGCAACTTCTCCTGGATGCTTGTCTGGTACTCGGC +
Preference number: 6 (lower is better)
Translates to: EDQASGRGADDE*QLLLDACLVLG
Trigger: GCCGAGTACCAGACAAGCATCCAGGAGAAGTTGCCACTCATCATCGGCTCCTCGGCCGCTGGCCTGGTCTTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000465676.1
CDS CAA 90 bp GTCCGGCTGTTGATGGGACAGTGGGTACAGGCCTCATCCCCTTGGTaGGCCTTGAAAGTCCCAGATGGACAACCTCGGCAGACGGTGCCA +
Preference number: 6 (lower is better)
Translates to: VRLLMGQWVQASSPW*ALKVPDGQPRQTVP
Trigger: TGGCACCGTCTGCCGAGGTTGTCCATCTGGGACTTTCAAGGCCAACCAAGGGGATGAGGCCTGTACCCACTGTCCCATCAACAGCCGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000544305.5
CDS CAA 90 bp TTGCGGCAGACACAGTTGGTGGCCCCTTCAGAAGTGGTCCGGCTGTaGATGGGACAGTGGGTACAGGCCTCATCCCCTTGGTTGGCCTTG +
Preference number: 6 (lower is better)
Translates to: LRQTQLVAPSEVVRL*MGQWVQASSPWLAL
Trigger: CAAGGCCAACCAAGGGGATGAGGCCTGTACCCACTGTCCCATCAACAGCCGGACCACTTCTGAAGGGGCCACCAACTGTGTCTGCCGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000465676.1
ENST00000544305.5
CDS TCA 72 bp GACAGTGGGTACAGGCCTCATCCCCTTGGTTGGCCTTaGAAGTCCCAGATGGACAACCTCGGCAGACGGTGC +
Preference number: 6 (lower is better)
Translates to: DSGYRPHPLGWP*KSQMDNLGRRC
Trigger: GCACCGTCTGCCGAGGTTGTCCATCTGGGACTTTCAAGGCCAACCAAGGGGATGAGGCCTGTACCCACTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000544305.5
CDS TCA 72 bp CACAGTTGGTGGCCCCTTCAGAAGTGGTCCGGCTGTTaGTGGGACAGTGGGTACAGGCCTCATCCCCTTGGT +
Preference number: 6 (lower is better)
Translates to: HSWWPLQKWSGC*WDSGYRPHPLG
Trigger: ACCAAGGGGATGAGGCCTGTACCCACTGTCCCATCAACAGCCGGACCACTTCTGAAGGGGCCACCAACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000465676.1
ENST00000544305.5
CDS GCA 72 bp TGTCCAGGGGGTCCAGGTCTGCTCTGTAGTAGCCATTaGGGCAGACACAGTTGGTGGCCCCTTCAGAAGTGG +
Preference number: 6 (lower is better)
Translates to: CPGGPGLLCSSH*GRHSWWPLQKW
Trigger: CCACTTCTGAAGGGGCCACCAACTGTGTCTGCCGCAATGGCTACTACAGAGCAGACCTGGACCCCCTGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000465676.1
ENST00000544305.5
CDS CCA 72 bp ATGAGGGAGGTCTCATTGACACTGGAAATCACAGCCTaGGGCGCGGAGGGGATGGTTGTGCAGGGCATGTCC +
Preference number: 6 (lower is better)
Translates to: MREVSLTLEITA*GAEGMVVQGMS
Trigger: GGACATGCCCTGCACAACCATCCCCTCCGCGCCCCAGGCTGTGATTTCCAGTGTCAATGAGACCTCCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000465676.1
ENST00000544305.5
CDS CAA 72 bp GGACAGTGGGTACAGGCCTCATCCCCTTGGTTGGCCTaGAAAGTCCCAGATGGACAACCTCGGCAGACGGTG +
Preference number: 6 (lower is better)
Translates to: GQWVQASSPWLA*KVPDGQPRQTV
Trigger: CACCGTCTGCCGAGGTTGTCCATCTGGGACTTTCAAGGCCAACCAAGGGGATGAGGCCTGTACCCACTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000544305.5
CDS CAA 72 bp ACACAGTTGGTGGCCCCTTCAGAAGTGGTCCGGCTGTaGATGGGACAGTGGGTACAGGCCTCATCCCCTTGG +
Preference number: 6 (lower is better)
Translates to: TQLVAPSEVVRL*MGQWVQASSPW
Trigger: CCAAGGGGATGAGGCCTGTACCCACTGTCCCATCAACAGCCGGACCACTTCTGAAGGGGCCACCAACTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000465676.1
ENST00000544305.5
CDS CAA 90 bp AGTGGTCCGGCTGTTGATGGGACAGTGGGTACAGGCCTCATCCCCTaGGTTGGCCTTGAAAGTCCCAGATGGACAACCTCGGCAGACGGT +
Preference number: 6 (lower is better)
Translates to: SGPAVDGTVGTGLIP*VGLESPRWTTSADG
Trigger: ACCGTCTGCCGAGGTTGTCCATCTGGGACTTTCAAGGCCAACCAAGGGGATGAGGCCTGTACCCACTGTCCCATCAACAGCCGGACCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000544305.5
CDS CCA 72 bp GCCCCTTCAGAAGTGGTCCGGCTGTTGATGGGACAGTaGGTACAGGCCTCATCCCCTTGGTTGGCCTTGAAA +
Preference number: 6 (lower is better)
Translates to: APSEVVRLLMGQ*VQASSPWLALK
Trigger: TTTCAAGGCCAACCAAGGGGATGAGGCCTGTACCCACTGTCCCATCAACAGCCGGACCACTTCTGAAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000465676.1
ENST00000544305.5
CDS CCA 72 bp GCGGCCGAGGAGCCGATGATGAGTGGCAACTTCTCCTaGATGCTTGTCTGGTACTCGGCTTCTGTCATGGTC +
Preference number: 6 (lower is better)
Translates to: AAEEPMMSGNFS*MLVWYSASVMV
Trigger: GACCATGACAGAAGCCGAGTACCAGACAAGCATCCAGGAGAAGTTGCCACTCATCATCGGCTCCTCGGCCGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000465676.1
CDS CAA 90 bp GTCCGGCTGTTGATGGGACAGTGGGTACAGGCCTCATCCCCTTGGTaGGCCTTGAAAGTCCCAGATGGACAACATGCCCATAGATCCGAG +
Preference number: 6 (lower is better)
Translates to: VRLLMGQWVQASSPW*ALKVPDGQHAHRSE
Trigger: CTCGGATCTATGGGCATGTTGTCCATCTGGGACTTTCAAGGCCAACCAAGGGGATGAGGCCTGTACCCACTGTCCCATCAACAGCCGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465676.1
CDS CCA 72 bp CTGTTGATGGGACAGTGGGTACAGGCCTCATCCCCTTaGTTGGCCTTGAAAGTCCCAGATGGACAACCTCGG +
Preference number: 6 (lower is better)
Translates to: LLMGQWVQASSP*LALKVPDGQPR
Trigger: CCGAGGTTGTCCATCTGGGACTTTCAAGGCCAACCAAGGGGATGAGGCCTGTACCCACTGTCCCATCAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000544305.5
CDS CAA 72 bp TTGATGGGACAGTGGGTACAGGCCTCATCCCCTTGGTaGGCCTTGAAAGTCCCAGATGGACAACCTCGGCAG +
Preference number: 6 (lower is better)
Translates to: LMGQWVQASSPW*ALKVPDGQPRQ
Trigger: CTGCCGAGGTTGTCCATCTGGGACTTTCAAGGCCAACCAAGGGGATGAGGCCTGTACCCACTGTCCCATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000544305.5
CDS CAA 72 bp GCTGTTGATGGGACAGTGGGTACAGGCCTCATCCCCTaGGTTGGCCTTGAAAGTCCCAGATGGACAACCTCG +
Preference number: 6 (lower is better)
Translates to: AVDGTVGTGLIP*VGLESPRWTTS
Trigger: CGAGGTTGTCCATCTGGGACTTTCAAGGCCAACCAAGGGGATGAGGCCTGTACCCACTGTCCCATCAACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000544305.5
CDS TCA 72 bp GTGACCCCAACCCGGAGAATGTCCTCCATCATCATCTaGGACACGACGTCAAAGGAGGTGAAGCCGGCATTG +
Preference number: 6 (lower is better)
Translates to: VTPTRRMSSIII*DTTSKEVKPAL
Trigger: CAATGCCGGCTTCACCTCCTTTGACGTCGTGTCTCAGATGATGATGGAGGACATTCTCCGGGTTGGGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
CDS TCA 72 bp GACAGTGGGTACAGGCCTCATCCCCTTGGTTGGCCTTaGAAGTCCCAGATGGACAACATGCCCATAGATCCG +
Preference number: 6 (lower is better)
Translates to: DSGYRPHPLGWP*KSQMDNMPIDP
Trigger: CGGATCTATGGGCATGTTGTCCATCTGGGACTTTCAAGGCCAACCAAGGGGATGAGGCCTGTACCCACTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465676.1
CDS CCA 72 bp CTGTTGATGGGACAGTGGGTACAGGCCTCATCCCCTTaGTTGGCCTTGAAAGTCCCAGATGGACAACATGCC +
Preference number: 6 (lower is better)
Translates to: LLMGQWVQASSP*LALKVPDGQHA
Trigger: GGCATGTTGTCCATCTGGGACTTTCAAGGCCAACCAAGGGGATGAGGCCTGTACCCACTGTCCCATCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465676.1
CDS CAA 72 bp GGACAGTGGGTACAGGCCTCATCCCCTTGGTTGGCCTaGAAAGTCCCAGATGGACAACATGCCCATAGATCC +
Preference number: 6 (lower is better)
Translates to: GQWVQASSPWLA*KVPDGQHAHRS
Trigger: GGATCTATGGGCATGTTGTCCATCTGGGACTTTCAAGGCCAACCAAGGGGATGAGGCCTGTACCCACTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465676.1
CDS CAA 72 bp GCTGTTGATGGGACAGTGGGTACAGGCCTCATCCCCTaGGTTGGCCTTGAAAGTCCCAGATGGACAACATGC +
Preference number: 6 (lower is better)
Translates to: AVDGTVGTGLIP*VGLESPRWTTC
Trigger: GCATGTTGTCCATCTGGGACTTTCAAGGCCAACCAAGGGGATGAGGCCTGTACCCACTGTCCCATCAACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465676.1
CDS TCA 72 bp CTGAGATTGCTGGGTGTATCCTCCAGACCAGAAAAGTaGGATCCAGAGAGGTCAAGGCACCTGCCTGAGGTC +
Preference number: 6 (lower is better)
Translates to: LRLLGVSSRPEK*DPERSRHLPEV
Trigger: GACCTCAGGCAGGTGCCTTGACCTCTCTGGATCTCACTTTTCTGGTCTGGAGGATACACCCAGCAATCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490436.1
CDS CCA 72 bp TGGAGAGGGGGTGCTAAGGTGACAAGCAGAAGTGGCTaGGCACTTACTCCATCATCATCTGAGACACGACGT +
Preference number: 6 (lower is better)
Translates to: WRGGAKVTSRSG*ALTPSSSETRR
Trigger: ACGTCGTGTCTCAGATGATGATGGAGTAAGTGCCCAGCCACTTCTGCTTGTCACCTTAGCACCCCCTCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS CAA 72 bp TTGATGGGACAGTGGGTACAGGCCTCATCCCCTTGGTaGGCCTTGAAAGTCCCAGATGGACAACATGCCCAT +
Preference number: 6 (lower is better)
Translates to: LMGQWVQASSPW*ALKVPDGQHAH
Trigger: ATGGGCATGTTGTCCATCTGGGACTTTCAAGGCCAACCAAGGGGATGAGGCCTGTACCCACTGTCCCATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465676.1
CDS TCA 72 bp AAGCAGAAGTGGCTGGGCACTTACTCCATCATCATCTaGGACACGACGTCAAAGGAGGTGAAGCCGGCATTG +
Preference number: 6 (lower is better)
Translates to: KQKWLGTYSIII*DTTSKEVKPAL
Trigger: CAATGCCGGCTTCACCTCCTTTGACGTCGTGTCTCAGATGATGATGGAGTAAGTGCCCAGCCACTTCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374627.1
CDS CCA 72 bp CCCATGGATTCTCCATCCAGTTGGGGAAGGTCTTGGTaGCCGAGTCAAAGTCAGCCTCATAGTAATAGAGGT +
Preference number: 6 (lower is better)
Translates to: PMDSPSSWGRSW*PSQSQPHSNRG
Trigger: ACCTCTATTACTATGAGGCTGACTTTGACTCGGCCACCAAGACCTTCCCCAACTGGATGGAGAATCCATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000544305.5
CDS CCA 72 bp TCACCCATGGATTCTCCATCCAGTTGGGGAAGGTCTTaGTGGCCGAGTCAAAGTCAGCCTCATAGTAATAGA +
Preference number: 6 (lower is better)
Translates to: SPMDSPSSWGRS*WPSQSQPHSNR
Trigger: TCTATTACTATGAGGCTGACTTTGACTCGGCCACCAAGACCTTCCCCAACTGGATGGAGAATCCATGGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374627.1
ENST00000374630.8
ENST00000374632.7
ENST00000400191.7
ENST00000544305.5
CDS TCA 72 bp CGTGGTAGGGAAAGGGATGTGACTGTTGCATTTCACTaGGATTGCTGGGTGTATCCTCCAGACCAGAAAAGT +
Preference number: 6 (lower is better)
Translates to: RGRERDVTVAFH*DCWVYPPDQKS
Trigger: ACTTTTCTGGTCTGGAGGATACACCCAGCAATCTCAGTGAAATGCAACAGTCACATCCCTTTCCCTACCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490436.1
CDS TCA 72 bp GGTCAAGATGAAAGGGTCGTGGTAGGGAAAGGGATGTaGCTGTTGCATTTCACTGAGATTGCTGGGTGTATC +
Preference number: 6 (lower is better)
Translates to: GQDERVVVGKGM*LLHFTEIAGCI
Trigger: GATACACCCAGCAATCTCAGTGAAATGCAACAGTCACATCCCTTTCCCTACCACGACCCTTTCATCTTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490436.1
CDS TCA 72 bp TTTTTGGAAACCCAGTTTTTCCCAACATCAAGCCACTaGGGTCAAGATGAAAGGGTCGTGGTAGGGAAAGGG +
Preference number: 6 (lower is better)
Translates to: FLETQFFPTSSH*GQDERVVVGKG
Trigger: CCCTTTCCCTACCACGACCCTTTCATCTTGACCTCAGTGGCTTGATGTTGGGAAAAACTGGGTTTCCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000490436.1
CDS CAA 90 bp TCTTGGGTTCAAATCCTGGCTCTAGTATATATGACCTCTGTGACCTaGGGCAAGTTCCTTAACTTCTCTGTGTCTTCATCTTCTCATAGT +
Preference number: 6 (lower is better)
Translates to: SWVQILALVYMTSVT*GKFLNFSVSSSSHS
Trigger: ACTATGAGAAGATGAAGACACAGAGAAGTTAAGGAACTTGCCCAAGGTCACAGAGGTCATATATACTAGAGCCAGGATTTGAACCCAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544305.5