RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPHB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000154928

Ensembl transcript IDs: ENST00000398015.8, ENST00000473867.5, ENST00000474732.1, ENST00000482618.5, ENST00000488154.5, ENST00000488992.1, ENST00000493838.1, ENST00000497173.5, ENST00000647596.1

Found 493 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGCTCGGTAATAACCGGTCCGACAGGTGCAGATGGGAGACGCCTCTaGAGGGGAGCGGCTGTTGGAGGGGCAGTGGGAGCAGCCTTCAGC +
Preference number: 1 (lower is better)
Translates to: RSVITGPTGADGRRL*RGAAVGGAVGAAFS
Trigger: GCTGAAGGCTGCTCCCACTGCCCCTCCAACAGCCGCTCCCCTGCAGAGGCGTCTCCCATCTGCACCTGTCGGACCGGTTATTACCGAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482618.5
3UTR CCA 90 bp GAGGGTCAAAGTCCGCTCGGTAATAACCGGTCCGACAGGTGCAGATaGGAGACGCCTCTGCAGGGGAGCGGCTGTTGGAGGGGCAGTGGG +
Preference number: 1 (lower is better)
Translates to: EGQSPLGNNRSDRCR*ETPLQGSGCWRGSG
Trigger: CCCACTGCCCCTCCAACAGCCGCTCCCCTGCAGAGGCGTCTCCCATCTGCACCTGTCGGACCGGTTATTACCGAGCGGACTTTGACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482618.5
3UTR GCA 90 bp CTTCTGGAGGGTCAAAGTCCGCTCGGTAATAACCGGTCCGACAGGTaGAGATGGGAGACGCCTCTGCAGGGGAGCGGCTGTTGGAGGGGC +
Preference number: 1 (lower is better)
Translates to: LLEGQSPLGNNRSDR*RWETPLQGSGCWRG
Trigger: GCCCCTCCAACAGCCGCTCCCCTGCAGAGGCGTCTCCCATCTGCACCTGTCGGACCGGTTATTACCGAGCGGACTTTGACCCTCCAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482618.5
3UTR TCA 90 bp ATTGGTTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTaGCAGAACAACATCTGGAGACTCAGGAGCTGGGTTTTGTTTGAA +
Preference number: 1 (lower is better)
Translates to: IGWIPMQWSAKSFGN*QNNIWRLRSWVLFE
Trigger: TTCAAACAAAACCCAGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAACCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
3UTR GCA 90 bp TCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTaGCTGCTAGCAACAGGTCCGGTTGATTCTTCACTGATGGAAATG +
Preference number: 1 (lower is better)
Translates to: SHGISNMLLSLRNGD*LLATGPVDSSLMEM
Trigger: CATTTCCATCAGTGAAGAATCAACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
3UTR TCA 90 bp CAACTGACAGAACAACATCTGGAGACTCAGGAGCTGGGTTTTGTTTaGAGAAACTTCCCTACAGGAGTCATGAGCAAAGGGAAACGAGTG +
Preference number: 1 (lower is better)
Translates to: QLTEQHLETQELGFV*RNFPTGVMSKGKRV
Trigger: CACTCGTTTCCCTTTGCTCATGACTCCTGTAGGGAAGTTTCTTCAAACAAAACCCAGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
3UTR TCA 90 bp ACAATGAGGTACAACAAGGAATGTAAAGAGAAACACAGACACATTTaGAACATTCCTCGGATGCCACACGGCTTAAGCCAGTCCATAGGT +
Preference number: 1 (lower is better)
Translates to: TMRYNKECKEKHRHI*NIPRMPHGLSQSIG
Trigger: ACCTATGGACTGGCTTAAGCCGTGTGGCATCCGAGGAATGTTTCAAATGTGTCTGTGTTTCTCTTTACATTCCTTGTTGTACCTCATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
3UTR TCA 90 bp TTTTCAATTGAAGGTACATCTCTTCTTCAATATGAAGACATTAATTaGATTGGTTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGC +
Preference number: 1 (lower is better)
Translates to: FSIEGTSLLQYEDIN*IGWIPMQWSAKSFG
Trigger: GCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAACCAATTCAATTAATGTCTTCATATTGAAGAAGAGATGTACCTTCAATTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
3UTR TCA 90 bp AAAGCAAGAATTCTCCCTTGTCACTTCTTGAATTGCAGATTCCAGTaGTGTGAAAGAACATTCTCCAGAAACACTTTCCTTCTCCTTTTC +
Preference number: 1 (lower is better)
Translates to: KARILPCHFLNCRFQ*CERTFSRNTFLLLF
Trigger: GAAAAGGAGAAGGAAAGTGTTTCTGGAGAATGTTCTTTCACATCACTGGAATCTGCAATTCAAGAAGTGACAAGGGAGAATTCTTGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398015.8
3UTR GCA 90 bp TTGGATTTCCTAGGGACAAAGACTTCCCAGTTCTTCTTTCTTGTTTaGATCTGTTACGAACAAGCACAGTCATTTTATAACACAGACATA +
Preference number: 1 (lower is better)
Translates to: LDFLGTKTSQFFFLV*ICYEQAQSFYNTDI
Trigger: TATGTCTGTGTTATAAAATGACTGTGCTTGTTCGTAACAGATGCAAACAAGAAAGAAGAACTGGGAAGTCTTTGTCCCTAGGAAATCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398015.8
3UTR-3UTR GCA 90 bp GGACCTGATGGGACGCTAGTGCATGCCACTTCTGGAGGGTCAAAGTCCGCTCGGGGCCTTGAATGTCCCTaGAGGGCAAGCTGCTTCCTC +
Preference number: 2 (lower is better)
Translates to: GPDGTLVHATSGGSKSARGLECP*RASCFL
Trigger: GAGGAAGCAGCTTGCCCTGCAGGGACATTCAAGGCC...CCGAGCGGACTTTGACCCTCCAGAAGTGGCATGCACTAGCGTCCCATCAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482618.5
3UTR-3UTR GCA 90 bp GCATGCCACTTCTGGAGGGTCAAAGTCCGCTCGGTAATAACCGGTCCGACAGGTGATGGGAGACGCCTCTaGAGGGGAGCGGCTGTTGGA +
Preference number: 2 (lower is better)
Translates to: ACHFWRVKVRSVITGPTGDGRRL*RGAAVG
Trigger: TCCAACAGCCGCTCCCCTGCAGAGGCGTCTCCCATC...ACCTGTCGGACCGGTTATTACCGAGCGGACTTTGACCCTCCAGAAGTGGCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482618.5
3UTR-3UTR GCA 90 bp TCATTGACGATGGAGATAACATTGCGGGGACCTGATGGGACGCTAGTGCATGCCCCCTGCAGGGCAAGCTaGTTCCTCAGAGGGGGTGGA +
Preference number: 2 (lower is better)
Translates to: SLTMEITLRGPDGTLVHAPCRAS*FLRGGG
Trigger: TCCACCCCCTCTGAGGAAGCAGCTTGCCCTGCAGGG...GGCATGCACTAGCGTCCCATCAGGTCCCCGCAATGTTATCTCCATCGTCAATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000482618.5
3UTR-3UTR CCA 90 bp TTCTGGAGGGTCAAAGTCCGCTCGGTAATAACCGGTCCGACAGGTGCAGATGGGCTTCCTCAGAGGGGGTaGATGCAGAGGAGGCTGTGT +
Preference number: 2 (lower is better)
Translates to: FWRVKVRSVITGPTGADGLPQRG*MQRRLC
Trigger: ACACAGCCTCCTCTGCATCCACCCCCTCTGAGGAAG...CCCATCTGCACCTGTCGGACCGGTTATTACCGAGCGGACTTTGACCCTCCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482618.5
3UTR-3UTR GCA 90 bp TTGACGATGGAGATAACATTGCGGGGACCTGATGGGACGCTAGTGCATGCCACTAACCGGTCCGACAGGTaGAGATGGGAGACGCCTCTG +
Preference number: 2 (lower is better)
Translates to: LTMEITLRGPDGTLVHATNRSDR*RWETPL
Trigger: CAGAGGCGTCTCCCATCTGCACCTGTCGGACCGGTT...AGTGGCATGCACTAGCGTCCCATCAGGTCCCCGCAATGTTATCTCCATCGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482618.5
3UTR-3UTR TCA 90 bp TTGACGATGGAGATAACATTGCGGGGACCTGATGGGACGCTAGTGCATGCCACTGCAGAGGAGGCTGTGTaGGTGTGGCAGAAATACCAG +
Preference number: 2 (lower is better)
Translates to: LTMEITLRGPDGTLVHATAEEAV*VWQKYQ
Trigger: CTGGTATTTCTGCCACACTCACACAGCCTCCTCTGC...AGTGGCATGCACTAGCGTCCCATCAGGTCCCCGCAATGTTATCTCCATCGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482618.5
3UTR-3UTR CCA 90 bp ATGGAGATAACATTGCGGGGACCTGATGGGACGCTAGTGCATGCCACTTCTGGACAGCCTTCAGCTTCCTaGCTGGCCTTGAATGTCCCT +
Preference number: 2 (lower is better)
Translates to: MEITLRGPDGTLVHATSGQPSAS*LALNVP
Trigger: AGGGACATTCAAGGCCAGCCAGGAAGCTGAAGGCTG...TCCAGAAGTGGCATGCACTAGCGTCCCATCAGGTCCCCGCAATGTTATCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482618.5
3UTR-3UTR GCA 90 bp GGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTCTGTGGTTGGGCAACTaGAGCCCACTGAGAATGGGA +
Preference number: 2 (lower is better)
Translates to: GQQSPLATDRTTSGDSGALWLGN*SPLRMG
Trigger: TCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAG...AGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
3UTR-3UTR CCA 90 bp GTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGACAGTGGTCAACCTCTaGTCCCCCTTGACCCTGGTC +
Preference number: 2 (lower is better)
Translates to: VSHGISNMLLSLRNGDCLTVVNL*SPLTLV
Trigger: GACCAGGGTCAAGGGGGACCAGAGGTTGACCACTGT...CAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
3UTR-3UTR TCA 90 bp GCCAACCAGAAAGCCAAACCAACACCATATTCCAGCCCCTTTGGATTTCCTAGGAATGCATTCCTCAGCTaGGAAGCCAGTCTCTCCAGT +
Preference number: 2 (lower is better)
Translates to: ANQKAKPTPYSSPFGFPRNAFLS*EASLSS
Trigger: ACTGGAGAGACTGGCTTCTCAGCTGAGGAATGCATT...CCTAGGAAATCCAAAGGGGCTGGAATATGGTGTTGGTTTGGCTTTCTGGTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398015.8
3UTR-3UTR TCA 90 bp CCAATAGGCCGATTGGGCCAACCAGAAAGCCAAACCAACACCATATTCCAGCCCCGGTTGATTCTTCACTaGTGGAAATGCATTCCTCAG +
Preference number: 2 (lower is better)
Translates to: PIGRLGQPESQTNTIFQPRLILH*WKCIPQ
Trigger: CTGAGGAATGCATTTCCATCAGTGAAGAATCAACCG...GGGCTGGAATATGGTGTTGGTTTGGCTTTCTGGTTGGCCCAATCGGCCTATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398015.8
3UTR-3UTR TCA 90 bp GCCAACCAGAAAGCCAAACCAACACCATATTCCAGCCCCTTTGGATTTCCTAGGTCCCTACAGGAGTCATaGGCAAAGGGAAACGAGTGT +
Preference number: 2 (lower is better)
Translates to: ANQKAKPTPYSSPFGFPRSLQES*AKGNEC
Trigger: ACACTCGTTTCCCTTTGCTCATGACTCCTGTAGGGA...CCTAGGAAATCCAAAGGGGCTGGAATATGGTGTTGGTTTGGCTTTCTGGTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398015.8
3UTR-3UTR CCA 90 bp GATTGCCTGCTAGCAACAGGTCCGGTTGATTCTTCACTGATGGAAATGCATTCCCAGTACATTCCACAGTaGTCAACCTCTGGTCCCCCT +
Preference number: 2 (lower is better)
Translates to: DCLLATGPVDSSLMEMHSQYIPQ*STSGPP
Trigger: AGGGGGACCAGAGGTTGACCACTGTGGAATGTACTG...GGAATGCATTTCCATCAGTGAAGAATCAACCGGACCTGTTGCTAGCAGGCAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
3UTR-3UTR TCA 90 bp CACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAAATGCATTCCTCAGCTaGGAAGCCAGTCTCTCCAGT +
Preference number: 2 (lower is better)
Translates to: HGISNMLLSLRNGDCLLANAFLS*EASLSS
Trigger: ACTGGAGAGACTGGCTTCTCAGCTGAGGAATGCATT...TGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
3UTR-3UTR CCA 90 bp CCCATTGAGCCAATAGGCCGATTGGGCCAACCAGAAAGCCAAACCAACACCATATCTGTCACTGAGAAATaGAGATTGCCTGCTAGCAAC +
Preference number: 2 (lower is better)
Translates to: PIEPIGRLGQPESQTNTISVTEK*RLPASN
Trigger: GTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGA...TATGGTGTTGGTTTGGCTTTCTGGTTGGCCCAATCGGCCTATTGGCTCAATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
3UTR CAA 90 bp GCAACTGACAGAACAACATCTGGAGACTCAGGAGCTGGGTTTTGTTaGAAGAAACTTCCCTACAGGAGTCATGAGCAAAGGGAAACGAGT +
Preference number: 2 (lower is better)
Translates to: ATDRTTSGDSGAGFC*KKLPYRSHEQRETS
Trigger: ACTCGTTTCCCTTTGCTCATGACTCCTGTAGGGAAGTTTCTTCAAACAAAACCCAGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
3UTR CAA 90 bp TTAATTGAATTGGTTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTaGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTGGGTTT +
Preference number: 2 (lower is better)
Translates to: LIELVGSPCSGQQSP*ATDRTTSGDSGAGF
Trigger: AAACCCAGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAACCAATTCAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
3UTR-3UTR CCA 90 bp GTATCATTCCAGGATGGCCCACACTGCATCCAATTCAAACCACTCACCTGTTTCACTGAGAATGGGAGCTaGGTTTACTCTTGTTCTCCT +
Preference number: 2 (lower is better)
Translates to: VSFQDGPHCIQFKPLTCFTENGS*VYSCSP
Trigger: AGGAGAACAAGAGTAAACCCAGCTCCCATTCTCAGT...GAAACAGGTGAGTGGTTTGAATTGGATGCAGTGTGGGCCATCCTGGAATGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
3UTR CAA 90 bp ATTGGGCCAACCAGAAAGCCAAACCAACACCATATTCCAGCCCCTTaGGATTTCCTAGGGACAAAGACTTCCCAGTTCTTCTTTCTTGTT +
Preference number: 2 (lower is better)
Translates to: IGPTRKPNQHHIPAP*DFLGTKTSQFFFLV
Trigger: AACAAGAAAGAAGAACTGGGAAGTCTTTGTCCCTAGGAAATCCAAAGGGGCTGGAATATGGTGTTGGTTTGGCTTTCTGGTTGGCCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398015.8
3UTR-3UTR CCA 90 bp ATTATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATACAGTGGTCAACCTCTaGTCCCCCTTGACCCTGGTC +
Preference number: 2 (lower is better)
Translates to: IIYLVSHGISNMLLSLRNTVVNL*SPLTLV
Trigger: GACCAGGGTCAAGGGGGACCAGAGGTTGACCACTGT...ATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
3UTR-3UTR GCA 90 bp CAGTATCATTCCAGGATGGCCCACACTGCATCCAATTCAAACCACTCACCTGTTAAGAAAATGGAACACTaGTTCTGTTTCTTCCCTCTA +
Preference number: 2 (lower is better)
Translates to: QYHSRMAHTASNSNHSPVKKMEH*FCFFPL
Trigger: TAGAGGGAAGAAACAGAAGCAGTGTTCCATTTTCTT...AACAGGTGAGTGGTTTGAATTGGATGCAGTGTGGGCCATCCTGGAATGATACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398015.8
3UTR CAA 90 bp CAATTGAAGGTACATCTCTTCTTCAATATGAAGACATTAATTGAATaGGTTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACT +
Preference number: 2 (lower is better)
Translates to: QLKVHLFFNMKTLIE*VGSPCSGQQSPLAT
Trigger: AGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAACCAATTCAATTAATGTCTTCATATTGAAGAAGAGATGTACCTTCAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
3UTR-3UTR TCA 90 bp TTTATTATTATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGCAACAGGTCCGGTTaGTTCTTCACTGATGGAAAT +
Preference number: 2 (lower is better)
Translates to: FIIIYLVSHGISNMLLSLSNRSG*FFTDGN
Trigger: ATTTCCATCAGTGAAGAATCAACCGGACCTGTTGCT...CAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATAATAATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
3UTR CCA 72 bp AGTCCGCTCGGTAATAACCGGTCCGACAGGTGCAGATaGGAGACGCCTCTGCAGGGGAGCGGCTGTTGGAGG +
Preference number: 3 (lower is better)
Translates to: SPLGNNRSDRCR*ETPLQGSGCWR
Trigger: CCTCCAACAGCCGCTCCCCTGCAGAGGCGTCTCCCATCTGCACCTGTCGGACCGGTTATTACCGAGCGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482618.5
3UTR GCA 72 bp GGTCAAAGTCCGCTCGGTAATAACCGGTCCGACAGGTaGAGATGGGAGACGCCTCTGCAGGGGAGCGGCTGT +
Preference number: 3 (lower is better)
Translates to: GQSPLGNNRSDR*RWETPLQGSGC
Trigger: ACAGCCGCTCCCCTGCAGAGGCGTCTCCCATCTGCACCTGTCGGACCGGTTATTACCGAGCGGACTTTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482618.5
3UTR-3UTR CAA 90 bp GTATCATTCCAGGATGGCCCACACTGCATCCAATTCAAACCACTCACCTGTTTCGAGCCAATAGGCCGATaGGGCCAACCAGAAAGCCAA +
Preference number: 3 (lower is better)
Translates to: VSFQDGPHCIQFKPLTCFEPIGR*GQPESQ
Trigger: TTGGCTTTCTGGTTGGCCCAATCGGCCTATTGGCTC...GAAACAGGTGAGTGGTTTGAATTGGATGCAGTGTGGGCCATCCTGGAATGATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
3UTR TCA 72 bp ATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTaGCAGAACAACATCTGGAGACTCAGGAGCTGGGTT +
Preference number: 3 (lower is better)
Translates to: IPMQWSAKSFGN*QNNIWRLRSWV
Trigger: AACCCAGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
3UTR CCA 72 bp TGGTTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTaGCAACTGACAGAACAACATCTGGAGACTCAGGAG +
Preference number: 3 (lower is better)
Translates to: WLDPHAVVSKVL*QLTEQHLETQE
Trigger: CTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
3UTR TCA 72 bp TGGGTTTTGTTTGAAGAAACTTCCCTACAGGAGTCATaGGCAAAGGGAAACGAGTGTGGGAGAAGGGAGGGG +
Preference number: 3 (lower is better)
Translates to: WVLFEETSLQES*AKGNECGRREG
Trigger: CCCCTCCCTTCTCCCACACTCGTTTCCCTTTGCTCATGACTCCTGTAGGGAAGTTTCTTCAAACAAAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
3UTR-3UTR CAA 90 bp GGGACAAAGACTTCCCAGTTCTTCTTTCTTGTTTGCATCTGTTACGAACAAGCAAACCTCTGGTCCCCCTaGACCCTGGTCCTTTTCCCT +
Preference number: 3 (lower is better)
Translates to: GTKTSQFFFLVCICYEQANLWSP*TLVLFP
Trigger: AGGGAAAAGGACCAGGGTCAAGGGGGACCAGAGGTT...TGCTTGTTCGTAACAGATGCAAACAAGAAAGAAGAACTGGGAAGTCTTTGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398015.8
3UTR-3UTR CAA 90 bp AGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTGGGTTTTGTACTGAGAAATGGAGATaGCCTGCTAGCAACAGGTCC +
Preference number: 3 (lower is better)
Translates to: SPLATDRTTSGDSGAGFCTEKWR*PASNRS
Trigger: GGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGT...ACAAAACCCAGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398015.8
3UTR CCA 72 bp GTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTaGGTTTACTCTTGTTCTCCTGATGCATATTGTTTT +
Preference number: 3 (lower is better)
Translates to: VVGQLQPTENGS*VYSCSPDAYCF
Trigger: AAAACAATATGCATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
3UTR-3UTR CAA 90 bp ATTATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATAACCTCTGGTCCCCCTaGACCCTGGTCCTTTTCCCT +
Preference number: 3 (lower is better)
Translates to: IIYLVSHGISNMLLSLRNNLWSP*TLVLFP
Trigger: AGGGAAAAGGACCAGGGTCAAGGGGGACCAGAGGTT...ATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
3UTR GCA 72 bp ATTAATCAGTCAGTATCATTCCAGGATGGCCCACACTaGATCCAATTCAAACCACTCACCTGTTTCCTGTCT +
Preference number: 3 (lower is better)
Translates to: INQSVSFQDGPH*IQFKPLTCFLS
Trigger: AGACAGGAAACAGGTGAGTGGTTTGAATTGGATGCAGTGTGGGCCATCCTGGAATGATACTGACTGATTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
3UTR TCA 72 bp ATTCTCCCTTGTCACTTCTTGAATTGCAGATTCCAGTaGTGTGAAAGAACATTCTCCAGAAACACTTTCCTT +
Preference number: 3 (lower is better)
Translates to: ILPCHFLNCRFQ*CERTFSRNTFL
Trigger: AAGGAAAGTGTTTCTGGAGAATGTTCTTTCACATCACTGGAATCTGCAATTCAAGAAGTGACAAGGGAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR GCA 90 bp GGACCTGATGGGACGCTAGTGCATGCCACTTCTGGAGGGTCAAAGTCCGCTCGGGACTTCCCGGAGCGCTaGGTGGGCGTGGGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: GPDGTLVHATSGGSKSARDFPER*VGVGRS
Trigger: ACTCCTGCCCACGCCCACGCAGCGCTCCGGGAAGTC...CCGAGCGGACTTTGACCCTCCAGAAGTGGCATGCACTAGCGTCCCATCAGGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR GCA 90 bp GTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGTGGGCAGGAGTGTGTaGGCGTGGGGCGGTGCGGGC +
Preference number: 4 (lower is better)
Translates to: VGQLQPTENGSWVYSCSPVGRSV*AWGGAG
Trigger: GCCCGCACCGCCCCACGCGCACACACTCCTGCCCAC...AGGAGAACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp TCATTGACGATGGAGATAACATTGCGGGGACCTGATGGGACGCTAGTGCATGCCGTGGGCAGGAGTGTGTaGGCGTGGGGCGGTGCGGGC +
Preference number: 4 (lower is better)
Translates to: SLTMEITLRGPDGTLVHAVGRSV*AWGGAG
Trigger: GCCCGCACCGCCCCACGCGCACACACTCCTGCCCAC...GGCATGCACTAGCGTCCCATCAGGTCCCCGCAATGTTATCTCCATCGTCAATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR GCA 90 bp ACAGGTGCAGATGGGAGACGCCTCTGCAGGGGAGCGGCTGTTGGAGGGGCAGTGAAGGCCTGGACACCTTaGATGCCACGCTGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: TGADGRRLCRGAAVGGAVKAWTP*MPRCSQ
Trigger: CTGAGAACAGCGTGGCATGCAAGGTGTCCAGGCCTT...CACTGCCCCTCCAACAGCCGCTCCCCTGCAGAGGCGTCTCCCATCTGCACCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR CCA 90 bp GCATGCCACTTCTGGAGGGTCAAAGTCCGCTCGGTAATAACCGGTCCGACAGGTTCCCGGAGCGCTGCGTaGGCGTGGGCAGGAGTGTGT +
Preference number: 4 (lower is better)
Translates to: ACHFWRVKVRSVITGPTGSRSAA*AWAGVC
Trigger: ACACACTCCTGCCCACGCCCACGCAGCGCTCCGGGA...ACCTGTCGGACCGGTTATTACCGAGCGGACTTTGACCCTCCAGAAGTGGCATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR TCA 90 bp GTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGGGCCCACAGGCTGCTaGTGGAGACGCGGCACTCCG +
Preference number: 4 (lower is better)
Translates to: VGQLQPTENGSWVYSCSPGPTGC*WRRGTP
Trigger: CGGAGTGCCGCGTCTCCATCAGCAGCCTGTGGGCCC...AGGAGAACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp ACAGGTGCAGATGGGAGACGCCTCTGCAGGGGAGCGGCTGTTGGAGGGGCAGTGTGGGACGCTAGTGCATaGCACTTCTGGAGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: TGADGRRLCRGAAVGGAVWDASA*HFWRVK
Trigger: TTTGACCCTCCAGAAGTGGCATGCACTAGCGTCCCA...CACTGCCCCTCCAACAGCCGCTCCCCTGCAGAGGCGTCTCCCATCTGCACCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR CCA 90 bp TGCCACTTCTGGAGGGTCAAAGTCCGCTCGGTAATAACCGGTCCGACAGGTGCAACCCGGACGCAGGATTaGCCGTCCAGCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: CHFWRVKVRSVITGPTGATRTQD*PSSPAL
Trigger: CAGAGCTGGGCTGGACGGCCAATCCTGCGTCCGGGT...TGCACCTGTCGGACCGGTTATTACCGAGCGGACTTTGACCCTCCAGAAGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR GCA 90 bp CTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGATGCATATGTGGGCAGGAGTGTGTaGGCGTGGGGCGGTGCGGGC +
Preference number: 4 (lower is better)
Translates to: LQPTENGSWVYSCSPDAYVGRSV*AWGGAG
Trigger: GCCCGCACCGCCCCACGCGCACACACTCCTGCCCAC...ATATGCATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp CTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTGACTTCCCGGAGCGCTaGGTGGGCGTGGGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: LWLGNCSPLRMGAGFTLVDFPER*VGVGRS
Trigger: ACTCCTGCCCACGCCCACGCAGCGCTCCGGGAAGTC...AACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp TTCTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTTCCCGGAGCGCTGCGTaGGCGTGGGCAGGAGTGTGT +
Preference number: 4 (lower is better)
Translates to: FFLWLGNCSPLRMGAGFTSRSAA*AWAGVC
Trigger: ACACACTCCTGCCCACGCCCACGCAGCGCTCCGGGA...AGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp ACAGGTGCAGATGGGAGACGCCTCTGCAGGGGAGCGGCTGTTGGAGGGGCAGTGCCTGGTAGGTGCGGATaGTGTTCAGGTTTTCATCGT +
Preference number: 4 (lower is better)
Translates to: TGADGRRLCRGAAVGGAVPGRCG*CSGFHR
Trigger: ACGATGAAAACCTGAACACCATCCGCACCTACCAGG...CACTGCCCCTCCAACAGCCGCTCCCCTGCAGAGGCGTCTCCCATCTGCACCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR CCA 90 bp GCATGCCACTTCTGGAGGGTCAAAGTCCGCTCGGTAATAACCGGTCCGACAGGTTCCGACAGGTGCAGATaGGAGACGCCTCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ACHFWRVKVRSVITGPTGSDRCR*ETPLQG
Trigger: CCCCTGCAGAGGCGTCTCCCATCTGCACCTGTCGGA...ACCTGTCGGACCGGTTATTACCGAGCGGACTTTGACCCTCCAGAAGTGGCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR TCA 90 bp TCTCCAGTACATTCCACAGTGGTCAACCTCTGGTCCCCCTTGACCCTGGTCCTTCAGGCCGACTCTTGGTaGCCACACCCTCCAGGCGAA +
Preference number: 4 (lower is better)
Translates to: SPVHSTVVNLWSPLTLVLQADSW*PHPPGE
Trigger: TTCGCCTGGAGGGTGTGGTCACCAAGAGTCGGCCTG...AAGGACCAGGGTCAAGGGGGACCAGAGGTTGACCACTGTGGAATGTACTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR GCA 90 bp TCTCCAGTACATTCCACAGTGGTCAACCTCTGGTCCCCCTTGACCCTGGTCCTTGATGGGAGACGCCTCTaGAGGGGAGCGGCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: SPVHSTVVNLWSPLTLVLDGRRL*RGAAVG
Trigger: TCCAACAGCCGCTCCCCTGCAGAGGCGTCTCCCATC...AAGGACCAGGGTCAAGGGGGACCAGAGGTTGACCACTGTGGAATGTACTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR GCA 90 bp GGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTCACGACCCCGGCCGCTaGCGAGCCAGCAATCAGGGG +
Preference number: 4 (lower is better)
Translates to: GSPCSGQQSPLATDRTTSHDPGR*RASNQG
Trigger: CCCCTGATTGCTGGCTCGGCAGCGGCCGGGGTCGTG...AGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp CTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGATGCATATCACGACCCCGGCCGCTaGCGAGCCAGCAATCAGGGG +
Preference number: 4 (lower is better)
Translates to: LQPTENGSWVYSCSPDAYHDPGR*RASNQG
Trigger: CCCCTGATTGCTGGCTCGGCAGCGGCCGGGGTCGTG...ATATGCATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp TGCCACTTCTGGAGGGTCAAAGTCCGCTCGGTAATAACCGGTCCGACAGGTGCATGCGCTCTCCGCGGGTaGCTTCTCGGTATCCTTTCG +
Preference number: 4 (lower is better)
Translates to: CHFWRVKVRSVITGPTGACALRG*LLGILS
Trigger: CGAAAGGATACCGAGAAGCCACCCGCGGAGAGCGCA...TGCACCTGTCGGACCGGTTATTACCGAGCGGACTTTGACCCTCCAGAAGTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR CCA 90 bp GGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGATGACCCGGACGCAGGATTaGCCGTCCAGCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: GNCSPLRMGAGFTLVLLMTRTQD*PSSPAL
Trigger: CAGAGCTGGGCTGGACGGCCAATCCTGCGTCCGGGT...CATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp GGACCTGATGGGACGCTAGTGCATGCCACTTCTGGAGGGTCAAAGTCCGCTCGGAGTGCATGCCACTTCTaGAGGGTCAAAGTCCGCTCG +
Preference number: 4 (lower is better)
Translates to: GPDGTLVHATSGGSKSARSACHF*RVKVRS
Trigger: CGAGCGGACTTTGACCCTCCAGAAGTGGCATGCACT...CCGAGCGGACTTTGACCCTCCAGAAGTGGCATGCACTAGCGTCCCATCAGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR CCA 90 bp TCTCCAGTACATTCCACAGTGGTCAACCTCTGGTCCCCCTTGACCCTGGTCCTTCTGCGAGAAAGGCTCTaGGAGCCCACTGGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: SPVHSTVVNLWSPLTLVLLRERL*EPTGFP
Trigger: GGGGAACCCAGTGGGCTCCCAGAGCCTTTCTCGCAG...AAGGACCAGGGTCAAGGGGGACCAGAGGTTGACCACTGTGGAATGTACTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493838.1
CDS-3UTR TCA 90 bp TTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTGGGCCCACAGGCTGCTaGTGGAGACGCGGCACTCCG +
Preference number: 4 (lower is better)
Translates to: FPRHLKHASVTEKWRLPAGPTGC*WRRGTP
Trigger: CGGAGTGCCGCGTCTCCATCAGCAGCCTGTGGGCCC...AGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR TCA 90 bp GTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTCTCAGGCCGACTCTTGGTaGCCACACCCTCCAGGCGAA +
Preference number: 4 (lower is better)
Translates to: VVGQLQPTENGSWVYSCSQADSW*PHPPGE
Trigger: TTCGCCTGGAGGGTGTGGTCACCAAGAGTCGGCCTG...AGAACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp GCATGCCACTTCTGGAGGGTCAAAGTCCGCTCGGTAATAACCGGTCCGACAGGTCACGTCCACTTCCTCTaGGTTGGGGATGCATGTGCC +
Preference number: 4 (lower is better)
Translates to: ACHFWRVKVRSVITGPTGHVHFL*VGDACA
Trigger: GGCACATGCATCCCCAACGCAGAGGAAGTGGACGTG...ACCTGTCGGACCGGTTATTACCGAGCGGACTTTGACCCTCCAGAAGTGGCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR GCA 90 bp ATGGAGATAACATTGCGGGGACCTGATGGGACGCTAGTGCATGCCACTTCTGGAGATGGGAGACGCCTCTaGAGGGGAGCGGCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: MEITLRGPDGTLVHATSGDGRRL*RGAAVG
Trigger: TCCAACAGCCGCTCCCCTGCAGAGGCGTCTCCCATC...TCCAGAAGTGGCATGCACTAGCGTCCCATCAGGTCCCCGCAATGTTATCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR GCA 90 bp CTTCTGGAGGGTCAAAGTCCGCTCGGTAATAACCGGTCCGACAGGTGCAGATGGGGCCTTGAATGTCCCTaGAGGGCAAGCTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LLEGQSPLGNNRSDRCRWGLECP*RASCFL
Trigger: GAGGAAGCAGCTTGCCCTGCAGGGACATTCAAGGCC...CCATCTGCACCTGTCGGACCGGTTATTACCGAGCGGACTTTGACCCTCCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR CCA 90 bp CCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTGCGCTCTCCGCGGGTaGCTTCTCGGTATCCTTTCG +
Preference number: 4 (lower is better)
Translates to: PVVGQLQPTENGSWVYSCCALRG*LLGILS
Trigger: CGAAAGGATACCGAGAAGCCACCCGCGGAGAGCGCA...ACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp CTTCTGGAGGGTCAAAGTCCGCTCGGTAATAACCGGTCCGACAGGTGCAGATGGCTTCCTCAGAGGGGGTaGATGCAGAGGAGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LLEGQSPLGNNRSDRCRWLPQRG*MQRRLC
Trigger: ACACAGCCTCCTCTGCATCCACCCCCTCTGAGGAAG...CCATCTGCACCTGTCGGACCGGTTATTACCGAGCGGACTTTGACCCTCCAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR TCA 90 bp TCTCCAGTACATTCCACAGTGGTCAACCTCTGGTCCCCCTTGACCCTGGTCCTTAACATTGCGGGGACCTaGTGGGACGCTAGTGCATGC +
Preference number: 4 (lower is better)
Translates to: SPVHSTVVNLWSPLTLVLNIAGT*WDASAC
Trigger: GCATGCACTAGCGTCCCATCAGGTCCCCGCAATGTT...AAGGACCAGGGTCAAGGGGGACCAGAGGTTGACCACTGTGGAATGTACTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR TCA 90 bp TTCTGGAGGGTCAAAGTCCGCTCGGTAATAACCGGTCCGACAGGTGCAGATGGGGCAGAGGAGGCTGTGTaGGTGTGGCAGAAATACCAG +
Preference number: 4 (lower is better)
Translates to: FWRVKVRSVITGPTGADGAEEAV*VWQKYQ
Trigger: CTGGTATTTCTGCCACACTCACACAGCCTCCTCTGC...CCCATCTGCACCTGTCGGACCGGTTATTACCGAGCGGACTTTGACCCTCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR GCA 90 bp CCAATAGGCCGATTGGGCCAACCAGAAAGCCAAACCAACACCATATTCCAGCCCCGTCCAGCCCAGCTCTaGAGTAGCCGTTCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: PIGRLGQPESQTNTIFQPRPAQL*SSRSGV
Trigger: GACACCAGAACGGCTACTGCAGAGCTGGGCTGGACG...GGGCTGGAATATGGTGTTGGTTTGGCTTTCTGGTTGGCCCAATCGGCCTATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR GCA 90 bp ATGGAGATAACATTGCGGGGACCTGATGGGACGCTAGTGCATGCCACTTCTGGACGTCCAGCCCAGCTCTaGAGTAGCCGTTCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: MEITLRGPDGTLVHATSGRPAQL*SSRSGV
Trigger: GACACCAGAACGGCTACTGCAGAGCTGGGCTGGACG...TCCAGAAGTGGCATGCACTAGCGTCCCATCAGGTCCCCGCAATGTTATCTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR GCA 90 bp TGCCACTTCTGGAGGGTCAAAGTCCGCTCGGTAATAACCGGTCCGACAGGTGCATGGGCTCGAAGACATTaGACACCTGGTAGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: CHFWRVKVRSVITGPTGAWARRH*TPGRCG
Trigger: TCCGCACCTACCAGGTGTGCAATGTCTTCGAGCCCA...TGCACCTGTCGGACCGGTTATTACCGAGCGGACTTTGACCCTCCAGAAGTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR GCA 90 bp CCCTTTCTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTGGGCTCGAAGACATTaGACACCTGGTAGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: PFLPVVGQLQPTENGSWVWARRH*TPGRCG
Trigger: TCCGCACCTACCAGGTGTGCAATGTCTTCGAGCCCA...AACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAGAAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp CCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTCCTCTGCGTTGGGGATaGATGTGCCCCGAGCAATCA +
Preference number: 4 (lower is better)
Translates to: PVVGQLQPTENGSWVYSCPLRWG*MCPEQS
Trigger: TGATTGCTCGGGGCACATGCATCCCCAACGCAGAGG...ACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp GTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTCGTAGCCAGCAACAGTaGGGGCACGCACCTGTACCA +
Preference number: 4 (lower is better)
Translates to: VGQLQPTENGSWVYSCSPRSQQQ*GHAPVP
Trigger: TGGTACAGGTGCGTGCCCGCACTGTTGCTGGCTACG...AGGAGAACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp CCCTTTCTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTGGGAGCCTCGGCCTGTaGTGTAATGCTGGAGCTTAT +
Preference number: 4 (lower is better)
Translates to: PFLPVVGQLQPTENGSWVGSLGL*CNAGAY
Trigger: ATAAGCTCCAGCATTACAGCACAGGCCGAGGCTCCC...AACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAGAAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp CCCTTTCTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTCTGTGGTTGGGCAACTaGAGCCCACTGAGAATGGGA +
Preference number: 4 (lower is better)
Translates to: PFLPVVGQLQPTENGSWVLWLGN*SPLRMG
Trigger: TCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAG...AACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAGAAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp CCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTAAAGGCCGTGAAGTCTaGGATGGAGCGGTCGAGCAG +
Preference number: 4 (lower is better)
Translates to: PVVGQLQPTENGSWVYSCKGREV*DGAVEQ
Trigger: CTGCTCGACCGCTCCATCCCAGACTTCACGGCCTTT...ACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp CCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTATCTGGGTGACCAGCTaGAGGGAGGTGAAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PVVGQLQPTENGSWVYSCIWVTS*REVKPA
Trigger: TGCTGGCTTCACCTCCCTCCAGCTGGTCACCCAGAT...ACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp TCTCCAGTACATTCCACAGTGGTCAACCTCTGGTCCCCCTTGACCCTGGTCCTTACAGTGGTCAACCTCTaGTCCCCCTTGACCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SPVHSTVVNLWSPLTLVLTVVNL*SPLTLV
Trigger: GACCAGGGTCAAGGGGGACCAGAGGTTGACCACTGT...AAGGACCAGGGTCAAGGGGGACCAGAGGTTGACCACTGTGGAATGTACTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CCA 90 bp TGCCACTTCTGGAGGGTCAAAGTCCGCTCGGTAATAACCGGTCCGACAGGTGCATCCTCCAAAAAGGCCTaGACACCTTGCATGCCACGC +
Preference number: 4 (lower is better)
Translates to: CHFWRVKVRSVITGPTGASSKKA*TPCMPR
Trigger: GCGTGGCATGCAAGGTGTCCAGGCCTTTTTGGAGGA...TGCACCTGTCGGACCGGTTATTACCGAGCGGACTTTGACCCTCCAGAAGTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR TCA 90 bp TTCTGGAGGGTCAAAGTCCGCTCGGTAATAACCGGTCCGACAGGTGCAGATGGGCGTTGCAGTAGAGTTTaGTGGGCACGTCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: FWRVKVRSVITGPTGADGRCSRV*WARPLP
Trigger: AGGAAGTGGACGTGCCCATCAAACTCTACTGCAACG...CCCATCTGCACCTGTCGGACCGGTTATTACCGAGCGGACTTTGACCCTCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR TCA 90 bp TTGACGATGGAGATAACATTGCGGGGACCTGATGGGACGCTAGTGCATGCCACTAACATTGCGGGGACCTaGTGGGACGCTAGTGCATGC +
Preference number: 4 (lower is better)
Translates to: LTMEITLRGPDGTLVHATNIAGT*WDASAC
Trigger: GCATGCACTAGCGTCCCATCAGGTCCCCGCAATGTT...AGTGGCATGCACTAGCGTCCCATCAGGTCCCCGCAATGTTATCTCCATCGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR TCA 90 bp CTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTCTGCCTTCAGGGTCTTaGTGGCCACGTAGATTTCCC +
Preference number: 4 (lower is better)
Translates to: LPVVGQLQPTENGSWVYSLPSGS*WPRRFP
Trigger: GGGAAATCTACGTGGCCATCAAGACCCTGAAGGCAG...AGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp TCTCCAGTACATTCCACAGTGGTCAACCTCTGGTCCCCCTTGACCCTGGTCCTTCAAGCTGGATCACGGTaGACTGCCCGTCATTTTGCC +
Preference number: 4 (lower is better)
Translates to: SPVHSTVVNLWSPLTLVLQAGSR*TARHFA
Trigger: GGCAAAATGACGGGCAGTTCACCGTGATCCAGCTTG...AAGGACCAGGGTCAAGGGGGACCAGAGGTTGACCACTGTGGAATGTACTGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR TCA 90 bp GTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTTGGTTGCCACAGTCTTaGGACTTGCCGGGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: VGQLQPTENGSWVYSCSPWLPQS*DLPGSG
Trigger: TCCGGAACCCGGCAAGTCTCAAGACTGTGGCAACCA...AGGAGAACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp TGCCACTTCTGGAGGGTCAAAGTCCGCTCGGTAATAACCGGTCCGACAGGTGCACAGAGATGTGCTCTCTaGCCCTGTCATAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: CHFWRVKVRSVITGPTGAQRCAL*PCHSLW
Trigger: CCAGAGACTATGACAGGGGCAGAGAGCACATCTCTG...TGCACCTGTCGGACCGGTTATTACCGAGCGGACTTTGACCCTCCAGAAGTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR GCA 90 bp CCCTTTCTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTCAGAGATGTGCTCTCTaGCCCTGTCATAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: PFLPVVGQLQPTENGSWVQRCAL*PCHSLW
Trigger: CCAGAGACTATGACAGGGGCAGAGAGCACATCTCTG...AACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAGAAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp CTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTCGTTGGGGATGCATGTaGCCCGAGCAATCACCAGAG +
Preference number: 4 (lower is better)
Translates to: LWLGNCSPLRMGAGFTLVRWGCM*PEQSPE
Trigger: CTCTGGTGATTGCTCGGGGCACATGCATCCCCAACG...AACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp TCATTGACGATGGAGATAACATTGCGGGGACCTGATGGGACGCTAGTGCATGCCCGTTGGGGATGCATGTaGCCCGAGCAATCACCAGAG +
Preference number: 4 (lower is better)
Translates to: SLTMEITLRGPDGTLVHARWGCM*PEQSPE
Trigger: CTCTGGTGATTGCTCGGGGCACATGCATCCCCAACG...GGCATGCACTAGCGTCCCATCAGGTCCCCGCAATGTTATCTCCATCGTCAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR GCA 90 bp TTCTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCGTTGGGGATGCATGTaGCCCGAGCAATCACCAGAG +
Preference number: 4 (lower is better)
Translates to: FFLWLGNCSPLRMGAGFTRWGCM*PEQSPE
Trigger: CTCTGGTGATTGCTCGGGGCACATGCATCCCCAACG...AGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp TTGACGATGGAGATAACATTGCGGGGACCTGATGGGACGCTAGTGCATGCCACTCCTCTGCGTTGGGGATaGATGTGCCCCGAGCAATCA +
Preference number: 4 (lower is better)
Translates to: LTMEITLRGPDGTLVHATPLRWG*MCPEQS
Trigger: TGATTGCTCGGGGCACATGCATCCCCAACGCAGAGG...AGTGGCATGCACTAGCGTCCCATCAGGTCCCCGCAATGTTATCTCCATCGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR GCA 90 bp GTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTAGGGCAAGCCTTGCATaGCACGCTGTTCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: VGQLQPTENGSWVYSCSPRASLA*HAVLRL
Trigger: GAGCCTGAGAACAGCGTGGCATGCAAGGCTTGCCCT...AGGAGAACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp GTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTCTGGCCTTGAATGTCCCTaGAGGGCAAGCCTTGCATGC +
Preference number: 4 (lower is better)
Translates to: VVGQLQPTENGSWVYSCSGLECP*RASLAC
Trigger: GCATGCAAGGCTTGCCCTGCAGGGACATTCAAGGCC...AGAACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp AAGAAACTTCCCTACAGGAGTCATGAGCAAAGGGAAACGAGTGTGGGAGAAGGGGATGGGAGACGCCTCTaGAGGGGAGCGGCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: KKLPYRSHEQRETSVGEGDGRRL*RGAAVG
Trigger: TCCAACAGCCGCTCCCCTGCAGAGGCGTCTCCCATC...CCCTTCTCCCACACTCGTTTCCCTTTGCTCATGACTCCTGTAGGGAAGTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp TCATTGACGATGGAGATAACATTGCGGGGACCTGATGGGACGCTAGTGCATGCCCCTGGACACCTTGCATaGCACGCTGTTCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SLTMEITLRGPDGTLVHAPGHLA*HAVLRL
Trigger: GAGCCTGAGAACAGCGTGGCATGCAAGGTGTCCAGG...GGCATGCACTAGCGTCCCATCAGGTCCCCGCAATGTTATCTCCATCGTCAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR CCA 90 bp AAGCCAAACCAACACCATATTCCAGCCCCTTTGGATTTCCTAGGGACAAAGACTTCCCGGAGCGCTGCGTaGGCGTGGGCAGGAGTGTGT +
Preference number: 4 (lower is better)
Translates to: KPNQHHIPAPLDFLGTKTSRSAA*AWAGVC
Trigger: ACACACTCCTGCCCACGCCCACGCAGCGCTCCGGGA...AGTCTTTGTCCCTAGGAAATCCAAAGGGGCTGGAATATGGTGTTGGTTTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR CCA 90 bp TCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTGATTCTTCACTGACCCGGACGCAGGATTaGCCGTCCAGCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SLRNGDCLLATGPVDSSLTRTQD*PSSPAL
Trigger: CAGAGCTGGGCTGGACGGCCAATCCTGCGTCCGGGT...CAGTGAAGAATCAACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR CCA 90 bp CCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTCAGCCTTCAGCTTCCTaGCTGGCCTTGAATGTCCCT +
Preference number: 4 (lower is better)
Translates to: PVVGQLQPTENGSWVYSCQPSAS*LALNVP
Trigger: AGGGACATTCAAGGCCAGCCAGGAAGCTGAAGGCTG...ACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp TCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTGGATCCGACAGGTGCAGATaGGAGACGCCTCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SPCSGQQSPLATDRTTSGSDRCR*ETPLQG
Trigger: CCCCTGCAGAGGCGTCTCCCATCTGCACCTGTCGGA...TCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp CTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTGACAGAGACGTGCTGTaGGGGGAAGGGACTCTTGCT +
Preference number: 4 (lower is better)
Translates to: LWLGNCSPLRMGAGFTLVDRDVL*GEGTLA
Trigger: AGCAAGAGTCCCTTCCCCCCACAGCACGTCTCTGTC...AACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp CTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTGTGGAGGGGGCGGCTTaGTTTGTGGTGATGTTGACA +
Preference number: 4 (lower is better)
Translates to: LPVVGQLQPTENGSWVYSVEGAA*FVVMLT
Trigger: TGTCAACATCACCACAAACCAAGCCGCCCCCTCCAC...AGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp CCCTTTCTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTCAATCCTTGCTGTGTTaGTCTGACTCCTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: PFLPVVGQLQPTENGSWVQSLLC*SDSWPW
Trigger: CCATGGCCAGGAGTCAGACCAACACAGCAAGGATTG...AACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAGAAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp GTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTCTGTAGATCTTCATCCCTaGGGAGCCTCGGCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: VVGQLQPTENGSWVYSCSVDLHP*GASACA
Trigger: AGCACAGGCCGAGGCTCCCCAGGGATGAAGATCTAC...AGAACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp TTCTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTATCTGGGTGACCAGCTaGAGGGAGGTGAAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: FFLWLGNCSPLRMGAGFTIWVTS*REVKPA
Trigger: TGCTGGCTTCACCTCCCTCCAGCTGGTCACCCAGAT...AGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp TCATTGACGATGGAGATAACATTGCGGGGACCTGATGGGACGCTAGTGCATGCCTTTCATCGTAGCCACTaGCTTCTTCCCACCCGGACG +
Preference number: 4 (lower is better)
Translates to: SLTMEITLRGPDGTLVHAFHRSH*LLPTRT
Trigger: CGTCCGGGTGGGAAGAAGTCAGTGGCTACGATGAAA...GGCATGCACTAGCGTCCCATCAGGTCCCCGCAATGTTATCTCCATCGTCAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR TCA 90 bp TCTCCAGTACATTCCACAGTGGTCAACCTCTGGTCCCCCTTGACCCTGGTCCTTCTCAGACCAGAAGGCTaGCTTCTTGGTGGCAATGAC +
Preference number: 4 (lower is better)
Translates to: SPVHSTVVNLWSPLTLVLLRPEG*LLGGND
Trigger: GTCATTGCCACCAAGAAGTCAGCCTTCTGGTCTGAG...AAGGACCAGGGTCAAGGGGGACCAGAGGTTGACCACTGTGGAATGTACTGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR TCA 90 bp ATGGAGATAACATTGCGGGGACCTGATGGGACGCTAGTGCATGCCACTTCTGGACAATGGTGTCTACTTTaGGGTAGGGGGCCTCAGACC +
Preference number: 4 (lower is better)
Translates to: MEITLRGPDGTLVHATSGQWCLL*GRGPQT
Trigger: GGTCTGAGGCCCCCTACCTCAAAGTAGACACCATTG...TCCAGAAGTGGCATGCACTAGCGTCCCATCAGGTCCCCGCAATGTTATCTCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR TCA 90 bp TGCCACTTCTGGAGGGTCAAAGTCCGCTCGGTAATAACCGGTCCGACAGGTGCAGAGGCCCAAAGCTCCTaGCTTCTGTGTTTACCTTCA +
Preference number: 4 (lower is better)
Translates to: CHFWRVKVRSVITGPTGAEAQSS*LLCLPS
Trigger: TGAAGGTAAACACAGAAGTCAGGAGCTTTGGGCCTC...TGCACCTGTCGGACCGGTTATTACCGAGCGGACTTTGACCCTCCAGAAGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR TCA 90 bp TATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATGGGCCCACAGGCTGCTaGTGGAGACGCGGCACTCCG +
Preference number: 4 (lower is better)
Translates to: YLVSHGISNMLLSLRNGDGPTGC*WRRGTP
Trigger: CGGAGTGCCGCGTCTCCATCAGCAGCCTGTGGGCCC...ATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR TCA 90 bp TCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTGATTCTTCACTGCAGGCCGACTCTTGGTaGCCACACCCTCCAGGCGAA +
Preference number: 4 (lower is better)
Translates to: SLRNGDCLLATGPVDSSLQADSW*PHPPGE
Trigger: TTCGCCTGGAGGGTGTGGTCACCAAGAGTCGGCCTG...CAGTGAAGAATCAACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR GCA 90 bp ATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTGATGATGGGAGACGCCTCTaGAGGGGAGCGGCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: MLLSLRNGDCLLATGPVDDGRRL*RGAAVG
Trigger: TCCAACAGCCGCTCCCCTGCAGAGGCGTCTCCCATC...ATCAACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR GCA 90 bp GGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTAACCGGTCCGACAGGTaGAGATGGGAGACGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GQQSPLATDRTTSGDSGANRSDR*RWETPL
Trigger: CAGAGGCGTCTCCCATCTGCACCTGTCGGACCGGTT...AGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp GTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGGCAGCTCCGGCGGTCTaGCCGGCACTTTTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: VVSKVLWQLTEQHLETQEAAPAV*PALFAD
Trigger: ATCTGCAAAAAGTGCCGGGCAGACCGCCGGAGCTGC...CTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp CTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTGTGGCACTGACTTGGTaGATGATGGGAACGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LWLGNCSPLRMGAGFTLVVALTW*MMGTVE
Trigger: CTCCACCGTTCCCATCATGCACCAAGTCAGTGCCAC...AACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp AAGAAACTTCCCTACAGGAGTCATGAGCAAAGGGAAACGAGTGTGGGAGAAGGGCGTAGCCAGCAACAGTaGGGGCACGCACCTGTACCA +
Preference number: 4 (lower is better)
Translates to: KKLPYRSHEQRETSVGEGRSQQQ*GHAPVP
Trigger: TGGTACAGGTGCGTGCCCGCACTGTTGCTGGCTACG...CCCTTCTCCCACACTCGTTTCCCTTTGCTCATGACTCCTGTAGGGAAGTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp CCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTGGATCACGGTGAACTaGCCGTCATTTTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PVVGQLQPTENGSWVYSCWITVN*PSFCLR
Trigger: CCTCAGGCAAAATGACGGGCAGTTCACCGTGATCCA...ACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp AAGAAACTTCCCTACAGGAGTCATGAGCAAAGGGAAACGAGTGTGGGAGAAGGGTGCGCTCTCCGCGGGTaGCTTCTCGGTATCCTTTCG +
Preference number: 4 (lower is better)
Translates to: KKLPYRSHEQRETSVGEGCALRG*LLGILS
Trigger: CGAAAGGATACCGAGAAGCCACCCGCGGAGAGCGCA...CCCTTCTCCCACACTCGTTTCCCTTTGCTCATGACTCCTGTAGGGAAGTTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp TCATTGACGATGGAGATAACATTGCGGGGACCTGATGGGACGCTAGTGCATGCCCTCCTTGCAGGATCCTaGGACATTAGGGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SLTMEITLRGPDGTLVHALLAGS*DIREAA
Trigger: AGCAGCCTCCCTAATGTCCCAGGATCCTGCAAGGAG...GGCATGCACTAGCGTCCCATCAGGTCCCCGCAATGTTATCTCCATCGTCAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR CCA 90 bp TTGACGATGGAGATAACATTGCGGGGACCTGATGGGACGCTAGTGCATGCCACTCAGCCTTCAGCTTCCTaGCTGGCCTTGAATGTCCCT +
Preference number: 4 (lower is better)
Translates to: LTMEITLRGPDGTLVHATQPSAS*LALNVP
Trigger: AGGGACATTCAAGGCCAGCCAGGAAGCTGAAGGCTG...AGTGGCATGCACTAGCGTCCCATCAGGTCCCCGCAATGTTATCTCCATCGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR CCA 90 bp AAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTCCGACAGGTGCAGATaGGAGACGCCTCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: KHASVTEKWRLPASNRSGSDRCR*ETPLQG
Trigger: CCCCTGCAGAGGCGTCTCCCATCTGCACCTGTCGGA...ACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CCA 90 bp TTAATTGAATTGGTTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTCGGTCGAGCAGGGGCTaGGAAGGCACGGCGGTGATG +
Preference number: 4 (lower is better)
Translates to: LIELVGSPCSGQQSPLATRSSRG*EGTAVM
Trigger: CATCACCGCCGTGCCTTCCCAGCCCCTGCTCGACCG...AGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAACCAATTCAATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp CCCTTTCTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTAAGCTGTCCCTGTACTaGACCATTTTGATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: PFLPVVGQLQPTENGSWVKLSLY*TILMAL
Trigger: CAGCGCCATCAAAATGGTCCAGTACAGGGACAGCTT...AACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAGAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp CTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTCAGTACATTCCACAGTaGTCAACCTCTGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: LPVVGQLQPTENGSWVYSQYIPQ*STSGPP
Trigger: AGGGGGACCAGAGGTTGACCACTGTGGAATGTACTG...AGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp TCTCCAGTACATTCCACAGTGGTCAACCTCTGGTCCCCCTTGACCCTGGTCCTTAAAGGGAAACGAGTGTaGGAGAAGGGAGGGGACTCT +
Preference number: 4 (lower is better)
Translates to: SPVHSTVVNLWSPLTLVLKGKRV*EKGGDS
Trigger: AGAGTCCCCTCCCTTCTCCCACACTCGTTTCCCTTT...AAGGACCAGGGTCAAGGGGGACCAGAGGTTGACCACTGTGGAATGTACTGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR CCA 90 bp CCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTGGATCCCCATGCAGTaGTCAGCAAAGTCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: PVVGQLQPTENGSWVYSCWIPMQ*SAKSFG
Trigger: GCCAAAGGACTTTGCTGACCACTGCATGGGGATCCA...ACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp TTGACGATGGAGATAACATTGCGGGGACCTGATGGGACGCTAGTGCATGCCACTCTCAGACCAGAAGGCTaGCTTCTTGGTGGCAATGAC +
Preference number: 4 (lower is better)
Translates to: LTMEITLRGPDGTLVHATLRPEG*LLGGND
Trigger: GTCATTGCCACCAAGAAGTCAGCCTTCTGGTCTGAG...AGTGGCATGCACTAGCGTCCCATCAGGTCCCCGCAATGTTATCTCCATCGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR TCA 90 bp GCCAACCAGAAAGCCAAACCAACACCATATTCCAGCCCCTTTGGATTTCCTAGGAACATTGCGGGGACCTaGTGGGACGCTAGTGCATGC +
Preference number: 4 (lower is better)
Translates to: ANQKAKPTPYSSPFGFPRNIAGT*WDASAC
Trigger: GCATGCACTAGCGTCCCATCAGGTCCCCGCAATGTT...CCTAGGAAATCCAAAGGGGCTGGAATATGGTGTTGGTTTGGCTTTCTGGTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR TCA 90 bp AGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTGGGTTTTGTCAGCAGCGATGCCCCTaGGCATACCCACAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SPLATDRTTSGDSGAGFCQQRCP*AYPQAG
Trigger: TCCAGCTTGTGGGTATGCTCAGGGGCATCGCTGCTG...ACAAAACCCAGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp AAGAAACTTCCCTACAGGAGTCATGAGCAAAGGGAAACGAGTGTGGGAGAAGGGTGGTTGCCACAGTCTTaGGACTTGCCGGGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: KKLPYRSHEQRETSVGEGWLPQS*DLPGSG
Trigger: TCCGGAACCCGGCAAGTCTCAAGACTGTGGCAACCA...CCCTTCTCCCACACTCGTTTCCCTTTGCTCATGACTCCTGTAGGGAAGTTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp GGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGATGTGCCATTGCCGTTGGTaGCTGACTTATCTGGACCCT +
Preference number: 4 (lower is better)
Translates to: GNCSPLRMGAGFTLVLLMCHCRW*LTYLDP
Trigger: AGGGTCCAGATAAGTCAGTCACCAACGGCAATGGCA...CATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp GGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTCCTCTGCGTTGGGGATaGATGTGCCCCGAGCAATCA +
Preference number: 4 (lower is better)
Translates to: GQQSPLATDRTTSGDSGAPLRWG*MCPEQS
Trigger: TGATTGCTCGGGGCACATGCATCCCCAACGCAGAGG...AGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp CACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAAACCGGTCCGACAGGTaGAGATGGGAGACGCCTCTG +
Preference number: 4 (lower is better)
Translates to: HGISNMLLSLRNGDCLLANRSDR*RWETPL
Trigger: CAGAGGCGTCTCCCATCTGCACCTGTCGGACCGGTT...TGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR GCA 90 bp CTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTTGGGACGCTAGTGCATaGCACTTCTGGAGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: LWLGNCSPLRMGAGFTLVWDASA*HFWRVK
Trigger: TTTGACCCTCCAGAAGTGGCATGCACTAGCGTCCCA...AACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp GTATCATTCCAGGATGGCCCACACTGCATCCAATTCAAACCACTCACCTGTTTCGCAGCTCCGGCGGTCTaGCCGGCACTTTTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: VSFQDGPHCIQFKPLTCFAAPAV*PALFAD
Trigger: ATCTGCAAAAAGTGCCGGGCAGACCGCCGGAGCTGC...GAAACAGGTGAGTGGTTTGAATTGGATGCAGTGTGGGCCATCCTGGAATGATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR GCA 90 bp TCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTGATTCTTCACTGCGTAGCCAGCAACAGTaGGGGCACGCACCTGTACCA +
Preference number: 4 (lower is better)
Translates to: SLRNGDCLLATGPVDSSLRSQQQ*GHAPVP
Trigger: TGGTACAGGTGCGTGCCCGCACTGTTGCTGGCTACG...CAGTGAAGAATCAACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR GCA 90 bp GCCAACCAGAAAGCCAAACCAACACCATATTCCAGCCCCTTTGGATTTCCTAGGAGAAAGTCCCGACGCTaGTTCTCCGAGTACCCTGCC +
Preference number: 4 (lower is better)
Translates to: ANQKAKPTPYSSPFGFPRRKSRR*FSEYPA
Trigger: GGCAGGGTACTCGGAGAAGCAGCGTCGGGACTTTCT...CCTAGGAAATCCAAAGGGGCTGGAATATGGTGTTGGTTTGGCTTTCTGGTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR GCA 90 bp TCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTGATTCTTCACTGGCCCTCCTTGCCCACTaGCTGGAAACTGACTCCGTG +
Preference number: 4 (lower is better)
Translates to: SLRNGDCLLATGPVDSSLALLAH*LETDSV
Trigger: CACGGAGTCAGTTTCCAGGCAGTGGGCAAGGAGGGC...CAGTGAAGAATCAACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493838.1
CDS-3UTR CCA 90 bp TCATTGACGATGGAGATAACATTGCGGGGACCTGATGGGACGCTAGTGCATGCCAGAGCGAGTGCGTCCTaGTGTCACATTGCTAGCTAC +
Preference number: 4 (lower is better)
Translates to: SLTMEITLRGPDGTLVHARASAS*CHIASY
Trigger: GTAGCTAGCAATGTGACACCAGGACGCACTCGCTCT...GGCATGCACTAGCGTCCCATCAGGTCCCCGCAATGTTATCTCCATCGTCAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR CCA 90 bp TTCTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTAGAGCGAGTGCGTCCTaGTGTCACATTGCTAGCTAC +
Preference number: 4 (lower is better)
Translates to: FFLWLGNCSPLRMGAGFTRASAS*CHIASY
Trigger: GTAGCTAGCAATGTGACACCAGGACGCACTCGCTCT...AGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp TTGACGATGGAGATAACATTGCGGGGACCTGATGGGACGCTAGTGCATGCCACTTGTTTATGGGAGAGGTaGGTGTGTGCGTGCGTGTGT +
Preference number: 4 (lower is better)
Translates to: LTMEITLRGPDGTLVHATCLWER*VCACVC
Trigger: ACACACGCACGCACACACCCACCTCTCCCATAAACA...AGTGGCATGCACTAGCGTCCCATCAGGTCCCCGCAATGTTATCTCCATCGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR CCA 90 bp CTTCTGGAGGGTCAAAGTCCGCTCGGTAATAACCGGTCCGACAGGTGCAGATGGGCCAATTGTTCTGGTTaGGCTCGAAGACATTGCACA +
Preference number: 4 (lower is better)
Translates to: LLEGQSPLGNNRSDRCRWANCSG*ARRHCT
Trigger: TGTGCAATGTCTTCGAGCCCAACCAGAACAATTGGC...CCATCTGCACCTGTCGGACCGGTTATTACCGAGCGGACTTTGACCCTCCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR CCA 90 bp GCATGCCACTTCTGGAGGGTCAAAGTCCGCTCGGTAATAACCGGTCCGACAGGTAGCAGCCAATTGTTCTaGTTGGGCTCGAAGACATTG +
Preference number: 4 (lower is better)
Translates to: ACHFWRVKVRSVITGPTGSSQLF*LGSKTL
Trigger: CAATGTCTTCGAGCCCAACCAGAACAATTGGCTGCT...ACCTGTCGGACCGGTTATTACCGAGCGGACTTTGACCCTCCAGAAGTGGCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR CCA 90 bp CCATATTCCAGCCCCTTTGGATTTCCTAGGGACAAAGACTTCCCAGTTCTTCTTTCCGACAGGTGCAGATaGGAGACGCCTCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PYSSPFGFPRDKDFPVLLSDRCR*ETPLQG
Trigger: CCCCTGCAGAGGCGTCTCCCATCTGCACCTGTCGGA...AAGAAGAACTGGGAAGTCTTTGTCCCTAGGAAATCCAAAGGGGCTGGAATATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR CCA 90 bp TTCTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCAATCCTTGCTGTGTTaGTCTGACTCCTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: FFLWLGNCSPLRMGAGFTQSLLC*SDSWPW
Trigger: CCATGGCCAGGAGTCAGACCAACACAGCAAGGATTG...AGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp TCTCCAGTACATTCCACAGTGGTCAACCTCTGGTCCCCCTTGACCCTGGTCCTTAAGCTGTCCCTGTACTaGACCATTTTGATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SPVHSTVVNLWSPLTLVLKLSLY*TILMAL
Trigger: CAGCGCCATCAAAATGGTCCAGTACAGGGACAGCTT...AAGGACCAGGGTCAAGGGGGACCAGAGGTTGACCACTGTGGAATGTACTGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CCA 90 bp AAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTGGGAGGCAGGTAGCCTaGGGCAAGTTCTTAGCCCTC +
Preference number: 4 (lower is better)
Translates to: KHASVTEKWRLPASNRSGGRQVA*GKFLAL
Trigger: GAGGGCTAAGAACTTGCCCCAGGCTACCTGCCTCCC...ACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493838.1
CDS-3UTR TCA 90 bp GGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTTTTCATCGTAGCCACTaGCTTCTTCCCACCCGGACG +
Preference number: 4 (lower is better)
Translates to: GQQSPLATDRTTSGDSGAFHRSH*LLPTRT
Trigger: CGTCCGGGTGGGAAGAAGTCAGTGGCTACGATGAAA...AGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp TCATTGACGATGGAGATAACATTGCGGGGACCTGATGGGACGCTAGTGCATGCCTGCAGTCTCTCACAGTaGAGCGCATCTCTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: SLTMEITLRGPDGTLVHACSLSQ*SASLCR
Trigger: TCTACACAGAGATGCGCTTCACTGTGAGAGACTGCA...GGCATGCACTAGCGTCCCATCAGGTCCCCGCAATGTTATCTCCATCGTCAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR TCA 90 bp GGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTCAATGGTGTCTACTTTaGGGTAGGGGGCCTCAGACC +
Preference number: 4 (lower is better)
Translates to: GQQSPLATDRTTSGDSGAQWCLL*GRGPQT
Trigger: GGTCTGAGGCCCCCTACCTCAAAGTAGACACCATTG...AGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp TTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTGGGTTTTGTTTGAAGCAGCAGCGATGCCCCTaGGCATACCCACAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LATDRTTSGDSGAGFCLKQQRCP*AYPQAG
Trigger: TCCAGCTTGTGGGTATGCTCAGGGGCATCGCTGCTG...CTTCAAACAAAACCCAGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp TTCTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTAATGCATTCCTCAGCTaGGAAGCCAGTCTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: FFLWLGNCSPLRMGAGFTNAFLS*EASLSS
Trigger: ACTGGAGAGACTGGCTTCTCAGCTGAGGAATGCATT...AGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp GTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTTCCCTACAGGAGTCATaGGCAAAGGGAAACGAGTGT +
Preference number: 4 (lower is better)
Translates to: VGQLQPTENGSWVYSCSPSLQES*AKGNEC
Trigger: ACACTCGTTTCCCTTTGCTCATGACTCCTGTAGGGA...AGGAGAACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp TCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTGATTCTTCACTGCCACTGCCTGGAAACTaGCTCCGTGCTGTTAGAGGG +
Preference number: 4 (lower is better)
Translates to: SLRNGDCLLATGPVDSSLPLPGN*LRAVRG
Trigger: CCCTCTAACAGCACGGAGTCAGTTTCCAGGCAGTGG...CAGTGAAGAATCAACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493838.1
CDS-3UTR GCA 90 bp CACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCACACGTCCACTTCCTCTaGGTTGGGGATGCATGTGCC +
Preference number: 4 (lower is better)
Translates to: HGISNMLLSLRNGDCLLAHVHFL*VGDACA
Trigger: GGCACATGCATCCCCAACGCAGAGGAAGTGGACGTG...TGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR GCA 90 bp GTATCATTCCAGGATGGCCCACACTGCATCCAATTCAAACCACTCACCTGTTTCAGGGCAAGCCTTGCATaGCACGCTGTTCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: VSFQDGPHCIQFKPLTCFRASLA*HAVLRL
Trigger: GAGCCTGAGAACAGCGTGGCATGCAAGGCTTGCCCT...GAAACAGGTGAGTGGTTTGAATTGGATGCAGTGTGGGCCATCCTGGAATGATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR GCA 90 bp ATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTGATCTGCAGGGCAAGCCTTaGATGCCACGCTGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: MLLSLRNGDCLLATGPVDLQGKP*MPRCSQ
Trigger: CTGAGAACAGCGTGGCATGCAAGGCTTGCCCTGCAG...ATCAACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR GCA 90 bp AGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTGGGTTTTGTCTGCAGGGCAAGCCTTaGATGCCACGCTGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: SPLATDRTTSGDSGAGFCLQGKP*MPRCSQ
Trigger: CTGAGAACAGCGTGGCATGCAAGGCTTGCCCTGCAG...ACAAAACCCAGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp CCATATTCCAGCCCCTTTGGATTTCCTAGGGACAAAGACTTCCCAGTTCTTCTTAACCGGTCCGACAGGTaGAGATGGGAGACGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PYSSPFGFPRDKDFPVLLNRSDR*RWETPL
Trigger: CAGAGGCGTCTCCCATCTGCACCTGTCGGACCGGTT...AAGAAGAACTGGGAAGTCTTTGTCCCTAGGAAATCCAAAGGGGCTGGAATATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR GCA 90 bp TTCTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCAGCCCATCAATCCTTaGTGTGTTGGTCTGACTCCT +
Preference number: 4 (lower is better)
Translates to: FFLWLGNCSPLRMGAGFTQPINP*CVGLTP
Trigger: AGGAGTCAGACCAACACAGCAAGGATTGATGGGCTG...AGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp TTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGAAAGTCCCGACGCTaGTTCTCCGAGTACCCTGCC +
Preference number: 4 (lower is better)
Translates to: FPRHLKHASVTEKWRLPARKSRR*FSEYPA
Trigger: GGCAGGGTACTCGGAGAAGCAGCGTCGGGACTTTCT...AGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR GCA 90 bp TTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATAGAAAGTCCCGACGCTaGTTCTCCGAGTACCCTGCC +
Preference number: 4 (lower is better)
Translates to: LDPHAVVSKVLWQLTEQHRKSRR*FSEYPA
Trigger: GGCAGGGTACTCGGAGAAGCAGCGTCGGGACTTTCT...ATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp CCAATAGGCCGATTGGGCCAACCAGAAAGCCAAACCAACACCATATTCCAGCCCCTGAGAAATGGAGATTaGCTGCTAGCAACAGGTCCG +
Preference number: 4 (lower is better)
Translates to: PIGRLGQPESQTNTIFQPLRNGD*LLATGP
Trigger: CGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAG...GGGCTGGAATATGGTGTTGGTTTGGCTTTCTGGTTGGCCCAATCGGCCTATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR GCA 90 bp TTCTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTCTTCTGATGGCCTaGCAAGGTGATGCTCTGATG +
Preference number: 4 (lower is better)
Translates to: FFLWLGNCSPLRMGAGFTLLLMA*QGDALM
Trigger: CATCAGAGCATCACCTTGGCAGGCCATCAGAAGAAG...AGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647596.1
CDS-3UTR CCA 90 bp GTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTCCTTGCAGGATCCTaGGACATTAGGGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VVSKVLWQLTEQHLETQELLAGS*DIREAA
Trigger: AGCAGCCTCCCTAATGTCCCAGGATCCTGCAAGGAG...CTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp GGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTCAGCCTTCAGCTTCCTaGCTGGCCTTGAATGTCCCT +
Preference number: 4 (lower is better)
Translates to: GSPCSGQQSPLATDRTTSQPSAS*LALNVP
Trigger: AGGGACATTCAAGGCCAGCCAGGAAGCTGAAGGCTG...AGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp GTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGAGTGCATGCCACTTCTaGAGGGTCAAAGTCCGCTCG +
Preference number: 4 (lower is better)
Translates to: VVSKVLWQLTEQHLETQESACHF*RVKVRS
Trigger: CGAGCGGACTTTGACCCTCCAGAAGTGGCATGCACT...CTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp TCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTGATTCTTCACTGCCCACCTGTCTCCCTTaGAGGGTGCCACTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: SLRNGDCLLATGPVDSSLPTCLP*RVPLQN
Trigger: ATTCTGGAGTGGCACCCTCCAAGGGAGACAGGTGGG...CAGTGAAGAATCAACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CCA 90 bp AACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTCCCACCTGTCTCCCTTaGAGGGTGCCACTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: NMLLSLRNGDCLLATGPVPTCLP*RVPLQN
Trigger: ATTCTGGAGTGGCACCCTCCAAGGGAGACAGGTGGG...AACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CCA 90 bp AGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTGGGTTTTGTCCCACCTGTCTCCCTTaGAGGGTGCCACTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: SPLATDRTTSGDSGAGFCPTCLP*RVPLQN
Trigger: ATTCTGGAGTGGCACCCTCCAAGGGAGACAGGTGGG...ACAAAACCCAGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp TTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATGACAGAGACGTGCTGTaGGGGGAAGGGACTCTTGCT +
Preference number: 4 (lower is better)
Translates to: LDPHAVVSKVLWQLTEQHDRDVL*GEGTLA
Trigger: AGCAAGAGTCCCTTCCCCCCACAGCACGTCTCTGTC...ATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp CTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTTCGTCAGTCAGAGTCTaGAAGCACATCTTGCCACTG +
Preference number: 4 (lower is better)
Translates to: LWLGNCSPLRMGAGFTLVSSVRV*KHILPL
Trigger: CAGTGGCAAGATGTGCTTCCAGACTCTGACTGACGA...AACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp GATTGCCTGCTAGCAACAGGTCCGGTTGATTCTTCACTGATGGAAATGCATTCCGTAGATCTTCATCCCTaGGGAGCCTCGGCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: DCLLATGPVDSSLMEMHSVDLHP*GASACA
Trigger: AGCACAGGCCGAGGCTCCCCAGGGATGAAGATCTAC...GGAATGCATTTCCATCAGTGAAGAATCAACCGGACCTGTTGCTAGCAGGCAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CCA 90 bp CACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAAAAGGCCGTGAAGTCTaGGATGGAGCGGTCGAGCAG +
Preference number: 4 (lower is better)
Translates to: HGISNMLLSLRNGDCLLAKGREV*DGAVEQ
Trigger: CTGCTCGACCGCTCCATCCCAGACTTCACGGCCTTT...TGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CCA 90 bp AAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTATCTGGGTGACCAGCTaGAGGGAGGTGAAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: KHASVTEKWRLPASNRSGIWVTS*REVKPA
Trigger: TGCTGGCTTCACCTCCCTCCAGCTGGTCACCCAGAT...ACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CCA 90 bp TTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATACAGTGGTCAACCTCTaGTCCCCCTTGACCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LDPHAVVSKVLWQLTEQHTVVNL*SPLTLV
Trigger: GACCAGGGTCAAGGGGGACCAGAGGTTGACCACTGT...ATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp CCCTTTCTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTCTGTCACTGAGAAATaGAGATTGCCTGCTAGCAAC +
Preference number: 4 (lower is better)
Translates to: PFLPVVGQLQPTENGSWVSVTEK*RLPASN
Trigger: GTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGA...AACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAGAAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp AACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTAAAGCCCTTTTCAGCTaGGAGGCAGGTAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: NMLLSLRNGDCLLATGPVKALFS*EAGSLG
Trigger: CCCCAGGCTACCTGCCTCCCAGCTGAAAAGGGCTTT...AACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493838.1
CDS-3UTR CCA 90 bp GGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTTGCTCTGATGTCATCTaGGTGACCAGCTGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GQQSPLATDRTTSGDSGACSDVI*VTSWRE
Trigger: CTCCCTCCAGCTGGTCACCCAGATGACATCAGAGCA...AGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647596.1
CDS-3UTR TCA 90 bp TCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTGGACTCAGACCAGAAGGCTaGCTTCTTGGTGGCAATGAC +
Preference number: 4 (lower is better)
Translates to: SPCSGQQSPLATDRTTSGLRPEG*LLGGND
Trigger: GTCATTGCCACCAAGAAGTCAGCCTTCTGGTCTGAG...TCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp CAGTATCATTCCAGGATGGCCCACACTGCATCCAATTCAAACCACTCACCTGTTCAATGGTGTCTACTTTaGGGTAGGGGGCCTCAGACC +
Preference number: 4 (lower is better)
Translates to: QYHSRMAHTASNSNHSPVQWCLL*GRGPQT
Trigger: GGTCTGAGGCCCCCTACCTCAAAGTAGACACCATTG...AACAGGTGAGTGGTTTGAATTGGATGCAGTGTGGGCCATCCTGGAATGATACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR TCA 90 bp GGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTCGTTGCAGTAGAGTTTaGTGGGCACGTCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: GSPCSGQQSPLATDRTTSRCSRV*WARPLP
Trigger: AGGAAGTGGACGTGCCCATCAAACTCTACTGCAACG...AGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp TTCTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTTGGCCATGGAGGAGTTaGACTCATTGTGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: FFLWLGNCSPLRMGAGFTWPWRS*THCVPS
Trigger: AGAAGGAACACAATGAGTTCAACTCCTCCATGGCCA...AGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp CTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTTGGCCATGGAGGAGTTaGACTCATTGTGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LWLGNCSPLRMGAGFTLVWPWRS*THCVPS
Trigger: AGAAGGAACACAATGAGTTCAACTCCTCCATGGCCA...AACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp AAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTCAAGCTGGATCACGGTaGACTGCCCGTCATTTTGCC +
Preference number: 4 (lower is better)
Translates to: KHASVTEKWRLPASNRSGQAGSR*TARHFA
Trigger: GGCAAAATGACGGGCAGTTCACCGTGATCCAGCTTG...ACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR TCA 90 bp TCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTGGATCTCAGGAGGTCTTCTaGTGTCATCTGGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: SPCSGQQSPLATDRTTSGSQEVF*CHLGDQ
Trigger: CTGGTCACCCAGATGACATCAGAAGACCTCCTGAGA...TCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR TCA 90 bp TTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTGATGGCCTGCCAAGGTaGTGCCTATTCTCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: FPRHLKHASVTEKWRLPADGLPR*CLFSGG
Trigger: ACCTCCTGAGAATAGGCATCACCTTGGCAGGCCATC...AGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR TCA 90 bp CTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTAGCAACAGGTCCGGTTaGTTCTTCACTGATGGAAAT +
Preference number: 4 (lower is better)
Translates to: LPVVGQLQPTENGSWVYSSNRSG*FFTDGN
Trigger: ATTTCCATCAGTGAAGAATCAACCGGACCTGTTGCT...AGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp CACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAGCAACTGCAGCCCACTaGGAATGGGAGCTGGGTTTA +
Preference number: 4 (lower is better)
Translates to: HGISNMLLSLRNGDCLLAATAAH*EWELGL
Trigger: TAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGC...TGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR TCA 90 bp AGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTGGGTTTTGTGCAACTGCAGCCCACTaGGAATGGGAGCTGGGTTTA +
Preference number: 4 (lower is better)
Translates to: SPLATDRTTSGDSGAGFCATAAH*EWELGL
Trigger: TAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGC...ACAAAACCCAGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp TTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTCCTCTCTTCCCATTaGGCCAATAGGCCGATTGGG +
Preference number: 4 (lower is better)
Translates to: LDPHAVVSKVLWQLTEQHLLSSH*ANRPIG
Trigger: CCCAATCGGCCTATTGGCTCAATGGGAAGAGAGGAG...ATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR GCA 90 bp TTAATTGAATTGGTTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTCGTCCAGCCCAGCTCTaGAGTAGCCGTTCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: LIELVGSPCSGQQSPLATRPAQL*SSRSGV
Trigger: GACACCAGAACGGCTACTGCAGAGCTGGGCTGGACG...AGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAACCAATTCAATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp ATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTGATGTGGCACTGACTTGGTaGATGATGGGAACGGTGGAG +
Preference number: 4 (lower is better)
Translates to: MLLSLRNGDCLLATGPVDVALTW*MMGTVE
Trigger: CTCCACCGTTCCCATCATGCACCAAGTCAGTGCCAC...ATCAACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR GCA 90 bp GTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGGTACCACATATACCATaGCAGGCCGCAGCCCATCAA +
Preference number: 4 (lower is better)
Translates to: VVSKVLWQLTEQHLETQEVPHIP*QAAAHQ
Trigger: TTGATGGGCTGCGGCCTGGCATGGTATATGTGGTAC...CTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp ATTATTATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGACACGACCCCGGCCGCTaGCGAGCCAGCAATCAGGGG +
Preference number: 4 (lower is better)
Translates to: IIIYLVSHGISNMLLSLRHDPGR*RASNQG
Trigger: CCCCTGATTGCTGGCTCGGCAGCGGCCGGGGTCGTG...TCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATAATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR GCA 90 bp TTCTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTTGTACACAGCCTCTTTaGTATAAGCCCGTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: FFLWLGNCSPLRMGAGFTCTQPL*YKPVSC
Trigger: GCAGGAAACGGGCTTATAGCAAAGAGGCTGTGTACA...AGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp CCCATTGAGCCAATAGGCCGATTGGGCCAACCAGAAAGCCAAACCAACACCATACACAGTCTTGAGACTTaGCGGGTTCCGGATCATCTT +
Preference number: 4 (lower is better)
Translates to: PIEPIGRLGQPESQTNTIHSLET*RVPDHL
Trigger: AAGATGATCCGGAACCCGGCAAGTCTCAAGACTGTG...TATGGTGTTGGTTTGGCTTTCTGGTTGGCCCAATCGGCCTATTGGCTCAATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR GCA 90 bp AAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTCACGGCGGTGATGGTTaGCACAGTCTTGAGACTTGC +
Preference number: 4 (lower is better)
Translates to: KHASVTEKWRLPASNRSGHGGDG*HSLETC
Trigger: GCAAGTCTCAAGACTGTGGCAACCATCACCGCCGTG...ACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR GCA 90 bp AACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTGAACTCAGGGGAGGGTaGGAATCTGGCATGCAGACT +
Preference number: 4 (lower is better)
Translates to: NMLLSLRNGDCLLATGPVELRGG*ESGMQT
Trigger: AGTCTGCATGCCAGATTCGCACCCTCCCCTGAGTTC...AACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493838.1
CDS-3UTR CCA 90 bp GTATCATTCCAGGATGGCCCACACTGCATCCAATTCAAACCACTCACCTGTTTCCTCCTTGCAGGATCCTaGGACATTAGGGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VSFQDGPHCIQFKPLTCFLLAGS*DIREAA
Trigger: AGCAGCCTCCCTAATGTCCCAGGATCCTGCAAGGAG...GAAACAGGTGAGTGGTTTGAATTGGATGCAGTGTGGGCCATCCTGGAATGATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR CCA 90 bp ATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTGATCAGCCTTCAGCTTCCTaGCTGGCCTTGAATGTCCCT +
Preference number: 4 (lower is better)
Translates to: MLLSLRNGDCLLATGPVDQPSAS*LALNVP
Trigger: AGGGACATTCAAGGCCAGCCAGGAAGCTGAAGGCTG...ATCAACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CCA 90 bp GTATCATTCCAGGATGGCCCACACTGCATCCAATTCAAACCACTCACCTGTTTCAGTGCATGCCACTTCTaGAGGGTCAAAGTCCGCTCG +
Preference number: 4 (lower is better)
Translates to: VSFQDGPHCIQFKPLTCFSACHF*RVKVRS
Trigger: CGAGCGGACTTTGACCCTCCAGAAGTGGCATGCACT...GAAACAGGTGAGTGGTTTGAATTGGATGCAGTGTGGGCCATCCTGGAATGATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR CCA 90 bp AAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTAGTGCATGCCACTTCTaGAGGGTCAAAGTCCGCTCG +
Preference number: 4 (lower is better)
Translates to: KHASVTEKWRLPASNRSGSACHF*RVKVRS
Trigger: CGAGCGGACTTTGACCCTCCAGAAGTGGCATGCACT...ACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CCA 90 bp TCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTGATTCTTCACTGGTGGAGGGGGCGGCTTaGTTTGTGGTGATGTTGACA +
Preference number: 4 (lower is better)
Translates to: SLRNGDCLLATGPVDSSLVEGAA*FVVMLT
Trigger: TGTCAACATCACCACAAACCAAGCCGCCCCCTCCAC...CAGTGAAGAATCAACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CCA 90 bp AAGCCAAACCAACACCATATTCCAGCCCCTTTGGATTTCCTAGGGACAAAGACTAAAGGCCGTGAAGTCTaGGATGGAGCGGTCGAGCAG +
Preference number: 4 (lower is better)
Translates to: KPNQHHIPAPLDFLGTKTKGREV*DGAVEQ
Trigger: CTGCTCGACCGCTCCATCCCAGACTTCACGGCCTTT...AGTCTTTGTCCCTAGGAAATCCAAAGGGGCTGGAATATGGTGTTGGTTTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR CCA 90 bp TCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTGATTCTTCACTGTCCTTGCCCACTGCCTaGAAACTGACTCCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SLRNGDCLLATGPVDSSLSLPTA*KLTPCC
Trigger: ACAGCACGGAGTCAGTTTCCAGGCAGTGGGCAAGGA...CAGTGAAGAATCAACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493838.1
CDS-3UTR CCA 90 bp TCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTGATTCTTCACTGCAGGAAATTCCTGCCTaGCACCACAGGGATCCCTCA +
Preference number: 4 (lower is better)
Translates to: SLRNGDCLLATGPVDSSLQEIPA*HHRDPS
Trigger: TGAGGGATCCCTGTGGTGCCAGGCAGGAATTTCCTG...CAGTGAAGAATCAACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493838.1
3UTR CAA 72 bp TCCCTCTCCTCTCTTCCCATTGAGCCAATAGGCCGATaGGGCCAACCAGAAAGCCAAACCAACACCATATTC +
Preference number: 4 (lower is better)
Translates to: SLSSLPIEPIGR*GQPESQTNTIF
Trigger: GAATATGGTGTTGGTTTGGCTTTCTGGTTGGCCCAATCGGCCTATTGGCTCAATGGGAAGAGAGGAGAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR TCA 90 bp AAGAAACTTCCCTACAGGAGTCATGAGCAAAGGGAAACGAGTGTGGGAGAAGGGGAGGCCCAAAGCTCCTaGCTTCTGTGTTTACCTTCA +
Preference number: 4 (lower is better)
Translates to: KKLPYRSHEQRETSVGEGEAQSS*LLCLPS
Trigger: TGAAGGTAAACACAGAAGTCAGGAGCTTTGGGCCTC...CCCTTCTCCCACACTCGTTTCCCTTTGCTCATGACTCCTGTAGGGAAGTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp CTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTGGCACTTTTTGCAGATaGTGTTGTAGGTCACATCAT +
Preference number: 4 (lower is better)
Translates to: LPVVGQLQPTENGSWVYSGTFCR*CCRSHH
Trigger: ATGATGTGACCTACAACATCATCTGCAAAAAGTGCC...AGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp TCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTGGAGCCCGTCATTTTGCCTaGGGAAAGAATCCAATGCAC +
Preference number: 4 (lower is better)
Translates to: SPCSGQQSPLATDRTTSGARHFA*GKNPMH
Trigger: GTGCATTGGATTCTTTCCTCAGGCAAAATGACGGGC...TCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp GGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTTCTTATCTAGGGTGTTaGCAATCTCCGCAAACCGGG +
Preference number: 4 (lower is better)
Translates to: GSPCSGQQSPLATDRTTSSYLGC*QSPQTG
Trigger: CCCGGTTTGCGGAGATTGTCAACACCCTAGATAAGA...AGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp GTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGTCTCAGGAGGTCTTCTaGTGTCATCTGGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: VSHGISNMLLSLRNGDCLSQEVF*CHLGDQ
Trigger: CTGGTCACCCAGATGACATCAGAAGACCTCCTGAGA...CAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR TCA 90 bp CTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTTGGACCCTCATAGAATaGATGCTGTTCAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: LWLGNCSPLRMGAGFTLVWTLIE*MLFRIF
Trigger: GAAGATCCTGAACAGCATTCATTCTATGAGGGTCCA...AACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp CAGTATCATTCCAGGATGGCCCACACTGCATCCAATTCAAACCACTCACCTGTTTGCCATTGCCGTTGGTaGCTGACTTATCTGGACCCT +
Preference number: 4 (lower is better)
Translates to: QYHSRMAHTASNSNHSPVCHCRW*LTYLDP
Trigger: AGGGTCCAGATAAGTCAGTCACCAACGGCAATGGCA...AACAGGTGAGTGGTTTGAATTGGATGCAGTGTGGGCCATCCTGGAATGATACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR TCA 90 bp TTCTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTAAGTCCTTTGGCAACTaGCAGAACAACATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: FFLWLGNCSPLRMGAGFTKSFGN*QNNIWR
Trigger: TCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTT...AGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp AGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTGGGTTTTGTCAGAGATGTGCTCTCTaGCCCTGTCATAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SPLATDRTTSGDSGAGFCQRCAL*PCHSLW
Trigger: CCAGAGACTATGACAGGGGCAGAGAGCACATCTCTG...ACAAAACCCAGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp TTAATTGAATTGGTTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTCACGTCCACTTCCTCTaGGTTGGGGATGCATGTGCC +
Preference number: 4 (lower is better)
Translates to: LIELVGSPCSGQQSPLATHVHFL*VGDACA
Trigger: GGCACATGCATCCCCAACGCAGAGGAAGTGGACGTG...AGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAACCAATTCAATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp TCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTGATTCTTCACTGTGGGACGCTAGTGCATaGCACTTCTGGAGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: SLRNGDCLLATGPVDSSLWDASA*HFWRVK
Trigger: TTTGACCCTCCAGAAGTGGCATGCACTAGCGTCCCA...CAGTGAAGAATCAACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR GCA 90 bp AAGCCAAACCAACACCATATTCCAGCCCCTTTGGATTTCCTAGGGACAAAGACTGTGGCACTGACTTGGTaGATGATGGGAACGGTGGAG +
Preference number: 4 (lower is better)
Translates to: KPNQHHIPAPLDFLGTKTVALTW*MMGTVE
Trigger: CTCCACCGTTCCCATCATGCACCAAGTCAGTGCCAC...AGTCTTTGTCCCTAGGAAATCCAAAGGGGCTGGAATATGGTGTTGGTTTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR GCA 90 bp TTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATGTACCACATATACCATaGCAGGCCGCAGCCCATCAA +
Preference number: 4 (lower is better)
Translates to: LDPHAVVSKVLWQLTEQHVPHIP*QAAAHQ
Trigger: TTGATGGGCTGCGGCCTGGCATGGTATATGTGGTAC...ATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp AAGAAACTTCCCTACAGGAGTCATGAGCAAAGGGAAACGAGTGTGGGAGAAGGGCGTAGATTTCCCTCTTaGCTGGCAGTTTCAAACGCC +
Preference number: 4 (lower is better)
Translates to: KKLPYRSHEQRETSVGEGRRFPS*LAVSNA
Trigger: GGCGTTTGAAACTGCCAGGCAAGAGGGAAATCTACG...CCCTTCTCCCACACTCGTTTCCCTTTGCTCATGACTCCTGTAGGGAAGTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp CTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGATGCATATCTGAGAAATGGAGATTaGCTGCTAGCAACAGGTCCG +
Preference number: 4 (lower is better)
Translates to: LQPTENGSWVYSCSPDAYLRNGD*LLATGP
Trigger: CGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAG...ATATGCATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp AAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTGAGGCACTGGGAAAATaGCACAGGGAGAAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: KHASVTEKWRLPASNRSGEALGK*HREKEV
Trigger: GACTTCCTTCTCCCTGTGGCATTTTCCCAGTGCCTC...ACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493838.1
CDS-3UTR CCA 90 bp AACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTAGAGCGAGTGCGTCCTaGTGTCACATTGCTAGCTAC +
Preference number: 4 (lower is better)
Translates to: NMLLSLRNGDCLLATGPVRASAS*CHIASY
Trigger: GTAGCTAGCAATGTGACACCAGGACGCACTCGCTCT...AACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR CCA 90 bp CAGTATCATTCCAGGATGGCCCACACTGCATCCAATTCAAACCACTCACCTGTTTGTTTATGGGAGAGGTaGGTGTGTGCGTGCGTGTGT +
Preference number: 4 (lower is better)
Translates to: QYHSRMAHTASNSNHSPVCLWER*VCACVC
Trigger: ACACACGCACGCACACACCCACCTCTCCCATAAACA...AACAGGTGAGTGGTTTGAATTGGATGCAGTGTGGGCCATCCTGGAATGATACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR CCA 90 bp GGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTCCTGGTAGGTGCGGATaGTGTTCAGGTTTTCATCGT +
Preference number: 4 (lower is better)
Translates to: GSPCSGQQSPLATDRTTSPGRCG*CSGFHR
Trigger: ACGATGAAAACCTGAACACCATCCGCACCTACCAGG...AGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp AACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTCAATCCTTGCTGTGTTaGTCTGACTCCTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: NMLLSLRNGDCLLATGPVQSLLC*SDSWPW
Trigger: CCATGGCCAGGAGTCAGACCAACACAGCAAGGATTG...AACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CCA 90 bp CTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGATGCATATGATTTCCCTCTTGCCTaGCAGTTTCAAACGCCCCTT +
Preference number: 4 (lower is better)
Translates to: LQPTENGSWVYSCSPDAYDFPLA*QFQTPL
Trigger: AAGGGGCGTTTGAAACTGCCAGGCAAGAGGGAAATC...ATATGCATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp ATTATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATCGGTCGAGCAGGGGCTaGGAAGGCACGGCGGTGATG +
Preference number: 4 (lower is better)
Translates to: IIYLVSHGISNMLLSLRNRSSRG*EGTAVM
Trigger: CATCACCGCCGTGCCTTCCCAGCCCCTGCTCGACCG...ATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CCA 90 bp AAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTCTTCTGATGTCATCTaGGTGACCAGCTGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: KHASVTEKWRLPASNRSGSSDVI*VTSWRE
Trigger: CTCCCTCCAGCTGGTCACCCAGATGACATCAGAAGA...ACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CCA 90 bp TCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTGATTCTTCACTGCAGTACATTCCACAGTaGTCAACCTCTGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: SLRNGDCLLATGPVDSSLQYIPQ*STSGPP
Trigger: AGGGGGACCAGAGGTTGACCACTGTGGAATGTACTG...CAGTGAAGAATCAACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CCA 90 bp GTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTCTACTGAGAATGGGAGCTaGGTTTACTCTTGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: VVGQLQPTENGSWVYSCSTENGS*VYSCSP
Trigger: AGGAGAACAAGAGTAAACCCAGCTCCCATTCTCAGT...AGAACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp CACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCATGGATCCCCATGCAGTaGTCAGCAAAGTCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: HGISNMLLSLRNGDCLLAWIPMQ*SAKSFG
Trigger: GCCAAAGGACTTTGCTGACCACTGCATGGGGATCCA...TGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398015.8
3UTR CAA 72 bp TTGGTTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTaGGCAACTGACAGAACAACATCTGGAGACTCAGGA +
Preference number: 4 (lower is better)
Translates to: LVGSPCSGQQSP*ATDRTTSGDSG
Trigger: TCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp CACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCATGCAGTCTCTCACAGTaGAGCGCATCTCTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: HGISNMLLSLRNGDCLLACSLSQ*SASLCR
Trigger: TCTACACAGAGATGCGCTTCACTGTGAGAGACTGCA...TGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR TCA 90 bp GAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGATGCATATTGTTTTGTCTTCAACATTGCGGGGACCTaGTGGGACGCTAGTGCATGC +
Preference number: 4 (lower is better)
Translates to: ENGSWVYSCSPDAYCFVFNIAGT*WDASAC
Trigger: GCATGCACTAGCGTCCCATCAGGTCCCCGCAATGTT...GAAGACAAAACAATATGCATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp GTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTGCTCCCTCAGCTCTaGCTTGTAATCATCGTCAGT +
Preference number: 4 (lower is better)
Translates to: VSHGISNMLLSLRNGDCLLLPQL*LVIIVS
Trigger: ACTGACGATGATTACAAGTCAGAGCTGAGGGAGCAG...CAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR TCA 90 bp TTAATTGAATTGGTTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTCTGCCTTCAGGGTCTTaGTGGCCACGTAGATTTCCC +
Preference number: 4 (lower is better)
Translates to: LIELVGSPCSGQQSPLATLPSGS*WPRRFP
Trigger: GGGAAATCTACGTGGCCATCAAGACCCTGAAGGCAG...AGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAACCAATTCAATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp AAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTGCCCGTCATTTTGCCTaGGGAAAGAATCCAATGCAC +
Preference number: 4 (lower is better)
Translates to: KHASVTEKWRLPASNRSGARHFA*GKNPMH
Trigger: GTGCATTGGATTCTTTCCTCAGGCAAAATGACGGGC...ACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR TCA 90 bp TTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTTCTTATCTAGGGTGTTaGCAATCTCCGCAAACCGGG +
Preference number: 4 (lower is better)
Translates to: FPRHLKHASVTEKWRLPASYLGC*QSPQTG
Trigger: CCCGGTTTGCGGAGATTGTCAACACCCTAGATAAGA...AGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR GCA 90 bp GAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGATGCATATTGTTTTGTCTTCGGCCTTGAATGTCCCTaGAGGGCAAGCCTTGCATGC +
Preference number: 4 (lower is better)
Translates to: ENGSWVYSCSPDAYCFVFGLECP*RASLAC
Trigger: GCATGCAAGGCTTGCCCTGCAGGGACATTCAAGGCC...GAAGACAAAACAATATGCATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp GATTGCCTGCTAGCAACAGGTCCGGTTGATTCTTCACTGATGGAAATGCATTCCCAGCCCATCAATCCTTaGTGTGTTGGTCTGACTCCT +
Preference number: 4 (lower is better)
Translates to: DCLLATGPVDSSLMEMHSQPINP*CVGLTP
Trigger: AGGAGTCAGACCAACACAGCAAGGATTGATGGGCTG...GGAATGCATTTCCATCAGTGAAGAATCAACCGGACCTGTTGCTAGCAGGCAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR GCA 90 bp TTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTCGTAGATTTCCCTCTTaGCTGGCAGTTTCAAACGCC +
Preference number: 4 (lower is better)
Translates to: FPRHLKHASVTEKWRLPARRFPS*LAVSNA
Trigger: GGCGTTTGAAACTGCCAGGCAAGAGGGAAATCTACG...AGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR GCA 90 bp TTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCGTAGATTTCCCTCTTaGCTGGCAGTTTCAAACGCC +
Preference number: 4 (lower is better)
Translates to: LDPHAVVSKVLWQLTEQHRRFPS*LAVSNA
Trigger: GGCGTTTGAAACTGCCAGGCAAGAGGGAAATCTACG...ATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp TCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTGATTCTTCACTGCTGAGAAATGGAGATTaGCTGCTAGCAACAGGTCCG +
Preference number: 4 (lower is better)
Translates to: SLRNGDCLLATGPVDSSLLRNGD*LLATGP
Trigger: CGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAG...CAGTGAAGAATCAACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR GCA 90 bp TTAATTGAATTGGTTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTCTGTGGTTGGGCAACTaGAGCCCACTGAGAATGGGA +
Preference number: 4 (lower is better)
Translates to: LIELVGSPCSGQQSPLATLWLGN*SPLRMG
Trigger: TCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAG...AGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAACCAATTCAATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp GGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTAGCAGCCAATTGTTCTaGTTGGGCTCGAAGACATTG +
Preference number: 4 (lower is better)
Translates to: GQQSPLATDRTTSGDSGASSQLF*LGSKTL
Trigger: CAATGTCTTCGAGCCCAACCAGAACAATTGGCTGCT...AGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp TATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATGACAGAGACGTGCTGTaGGGGGAAGGGACTCTTGCT +
Preference number: 4 (lower is better)
Translates to: YLVSHGISNMLLSLRNGDDRDVL*GEGTLA
Trigger: AGCAAGAGTCCCTTCCCCCCACAGCACGTCTCTGTC...ATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CCA 90 bp TTAATTGAATTGGTTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTGTGGAGGGGGCGGCTTaGTTTGTGGTGATGTTGACA +
Preference number: 4 (lower is better)
Translates to: LIELVGSPCSGQQSPLATVEGAA*FVVMLT
Trigger: TGTCAACATCACCACAAACCAAGCCGCCCCCTCCAC...AGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAACCAATTCAATTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp GATTGCCTGCTAGCAACAGGTCCGGTTGATTCTTCACTGATGGAAATGCATTCCATAGTGGCACTGACTTaGTGCATGATGGGAACGGTG +
Preference number: 4 (lower is better)
Translates to: DCLLATGPVDSSLMEMHSIVALT*CMMGTV
Trigger: CACCGTTCCCATCATGCACCAAGTCAGTGCCACTAT...GGAATGCATTTCCATCAGTGAAGAATCAACCGGACCTGTTGCTAGCAGGCAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CCA 90 bp AAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTATAGTGGCACTGACTTaGTGCATGATGGGAACGGTG +
Preference number: 4 (lower is better)
Translates to: KHASVTEKWRLPASNRSGIVALT*CMMGTV
Trigger: CACCGTTCCCATCATGCACCAAGTCAGTGCCACTAT...ACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CCA 90 bp AGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTGGGTTTTGTATAGTGGCACTGACTTaGTGCATGATGGGAACGGTG +
Preference number: 4 (lower is better)
Translates to: SPLATDRTTSGDSGAGFCIVALT*CMMGTV
Trigger: CACCGTTCCCATCATGCACCAAGTCAGTGCCACTAT...ACAAAACCCAGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp TATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATGTAGATCTTCATCCCTaGGGAGCCTCGGCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: YLVSHGISNMLLSLRNGDVDLHP*GASACA
Trigger: AGCACAGGCCGAGGCTCCCCAGGGATGAAGATCTAC...ATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CCA 90 bp TCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTGATTCTTCACTGGATTTCCCTCTTGCCTaGCAGTTTCAAACGCCCCTT +
Preference number: 4 (lower is better)
Translates to: SLRNGDCLLATGPVDSSLDFPLA*QFQTPL
Trigger: AAGGGGCGTTTGAAACTGCCAGGCAAGAGGGAAATC...CAGTGAAGAATCAACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CCA 90 bp GTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGGATTTCCCTCTTGCCTaGCAGTTTCAAACGCCCCTT +
Preference number: 4 (lower is better)
Translates to: VSHGISNMLLSLRNGDCLDFPLA*QFQTPL
Trigger: AAGGGGCGTTTGAAACTGCCAGGCAAGAGGGAAATC...CAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CCA 90 bp TTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTGGGTTTTGTTTGAAGAAAGGGAAACGAGTGTaGGAGAAGGGAGGGGACTCT +
Preference number: 4 (lower is better)
Translates to: LATDRTTSGDSGAGFCLKKGKRV*EKGGDS
Trigger: AGAGTCCCCTCCCTTCTCCCACACTCGTTTCCCTTT...CTTCAAACAAAACCCAGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp TTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTGGGTTTTGTTTGAAGGAGGCCCAAAGCTCCTaGCTTCTGTGTTTACCTTCA +
Preference number: 4 (lower is better)
Translates to: LATDRTTSGDSGAGFCLKEAQSS*LLCLPS
Trigger: TGAAGGTAAACACAGAAGTCAGGAGCTTTGGGCCTC...CTTCAAACAAAACCCAGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp ATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTGATTGGCCATGGAGGAGTTaGACTCATTGTGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: MLLSLRNGDCLLATGPVDWPWRS*THCVPS
Trigger: AGAAGGAACACAATGAGTTCAACTCCTCCATGGCCA...ATCAACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR TCA 90 bp TTAATTGAATTGGTTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTAGCACATCTTGCCACTaGACTTGCCGTAGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: LIELVGSPCSGQQSPLATSTSCH*TCRSQQ
Trigger: TTGCTGGCTACGGCAAGTTCAGTGGCAAGATGTGCT...AGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAACCAATTCAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp CACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCATGGGATCCTCGTAAGTaGAGGGGTCAATGTAGATCT +
Preference number: 4 (lower is better)
Translates to: HGISNMLLSLRNGDCLLAWDPRK*RGQCRS
Trigger: AGATCTACATTGACCCCTTCACTTACGAGGATCCCA...TGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR TCA 90 bp AGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTGGGTTTTGTTGGGATCCTCGTAAGTaGAGGGGTCAATGTAGATCT +
Preference number: 4 (lower is better)
Translates to: SPLATDRTTSGDSGAGFCWDPRK*RGQCRS
Trigger: AGATCTACATTGACCCCTTCACTTACGAGGATCCCA...ACAAAACCCAGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp AACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTACTCCCCTGCTCCGATaGCCTCTTCAATTTTCACAA +
Preference number: 4 (lower is better)
Translates to: NMLLSLRNGDCLLATGPVTPLLR*PLQFSQ
Trigger: TTGTGAAAATTGAAGAGGTCATCGGAGCAGGGGAGT...AACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR TCA 90 bp CACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACTCCCCTGCTCCGATaGCCTCTTCAATTTTCACAA +
Preference number: 4 (lower is better)
Translates to: HGISNMLLSLRNGDCLLATPLLR*PLQFSQ
Trigger: TTGTGAAAATTGAAGAGGTCATCGGAGCAGGGGAGT...TGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR TCA 90 bp GAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGATGCATATTGTTTTGTCTTCCAAGCTGGATCACGGTaGACTGCCCGTCATTTTGCC +
Preference number: 4 (lower is better)
Translates to: ENGSWVYSCSPDAYCFVFQAGSR*TARHFA
Trigger: GGCAAAATGACGGGCAGTTCACCGTGATCCAGCTTG...GAAGACAAAACAATATGCATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp TATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGTGGTTGCCACAGTCTTaGGACTTGCCGGGTTCCGGA +
Preference number: 4 (lower is better)
Translates to: YIFGFPRHLKHASVTEKWWLPQS*DLPGSG
Trigger: TCCGGAACCCGGCAAGTCTCAAGACTGTGGCAACCA...CCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR TCA 90 bp GGGACAAAGACTTCCCAGTTCTTCTTTCTTGTTTGCATCTGTTACGAACAAGCAGATGGCCTGCCAAGGTaGTGCCTATTCTCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: GTKTSQFFFLVCICYEQADGLPR*CLFSGG
Trigger: ACCTCCTGAGAATAGGCATCACCTTGGCAGGCCATC...TGCTTGTTCGTAACAGATGCAAACAAGAAAGAAGAACTGGGAAGTCTTTGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR TCA 90 bp GGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTTGGACCCTCATAGAATaGATGCTGTTCAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: GSPCSGQQSPLATDRTTSWTLIE*MLFRIF
Trigger: GAAGATCCTGAACAGCATTCATTCTATGAGGGTCCA...AGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp GATTGCCTGCTAGCAACAGGTCCGGTTGATTCTTCACTGATGGAAATGCATTCCATTGCCGTTGGTGACTaGCTTATCTGGACCCTCATA +
Preference number: 4 (lower is better)
Translates to: DCLLATGPVDSSLMEMHSIAVGD*LIWTLI
Trigger: TATGAGGGTCCAGATAAGTCAGTCACCAACGGCAAT...GGAATGCATTTCCATCAGTGAAGAATCAACCGGACCTGTTGCTAGCAGGCAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR TCA 90 bp CACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAATTGCCGTTGGTGACTaGCTTATCTGGACCCTCATA +
Preference number: 4 (lower is better)
Translates to: HGISNMLLSLRNGDCLLAIAVGD*LIWTLI
Trigger: TATGAGGGTCCAGATAAGTCAGTCACCAACGGCAAT...TGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR TCA 90 bp TTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATATTGCCGTTGGTGACTaGCTTATCTGGACCCTCATA +
Preference number: 4 (lower is better)
Translates to: LDPHAVVSKVLWQLTEQHIAVGD*LIWTLI
Trigger: TATGAGGGTCCAGATAAGTCAGTCACCAACGGCAAT...ATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp AAGAAACTTCCCTACAGGAGTCATGAGCAAAGGGAAACGAGTGTGGGAGAAGGGCGGTTGATTCTTCACTaGTGGAAATGCATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: KKLPYRSHEQRETSVGEGRLILH*WKCIPQ
Trigger: CTGAGGAATGCATTTCCATCAGTGAAGAATCAACCG...CCCTTCTCCCACACTCGTTTCCCTTTGCTCATGACTCCTGTAGGGAAGTTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp GGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTCGGTTGATTCTTCACTaGTGGAAATGCATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GQQSPLATDRTTSGDSGARLILH*WKCIPQ
Trigger: CTGAGGAATGCATTTCCATCAGTGAAGAATCAACCG...AGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp GGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTGAGCTGGGTTTTGTTTaGAGAAACTTCCCTACAGGA +
Preference number: 4 (lower is better)
Translates to: GSPCSGQQSPLATDRTTSELGFV*RNFPTG
Trigger: TCCTGTAGGGAAGTTTCTTCAAACAAAACCCAGCTC...AGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp GGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTGAGCTGGGTTTTGTTTaGAGAAACTTCCCTACAGGA +
Preference number: 4 (lower is better)
Translates to: GQQSPLATDRTTSGDSGAELGFV*RNFPTG
Trigger: TCCTGTAGGGAAGTTTCTTCAAACAAAACCCAGCTC...AGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp AGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTGGGTTTTGTTGTACACAGCCTCTTTaGTATAAGCCCGTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: SPLATDRTTSGDSGAGFCCTQPL*YKPVSC
Trigger: GCAGGAAACGGGCTTATAGCAAAGAGGCTGTGTACA...ACAAAACCCAGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp CACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCACTTCTTCTGATGGCCTaGCAAGGTGATGCCTATTCT +
Preference number: 4 (lower is better)
Translates to: HGISNMLLSLRNGDCLLALLLMA*QGDAYS
Trigger: AGAATAGGCATCACCTTGGCAGGCCATCAGAAGAAG...TGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR GCA 90 bp TTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTGGGTTTTGTTTGAAGTTGGTTGGATCCCCATaGAGTGGTCAGCAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: LATDRTTSGDSGAGFCLKLVGSP*SGQQSP
Trigger: AGGACTTTGCTGACCACTGCATGGGGATCCAACCAA...CTTCAAACAAAACCCAGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp AAGCCAAACCAACACCATATTCCAGCCCCTTTGGATTTCCTAGGGACAAAGACTCAGGATGGCCCACACTaGATCCAATTCAAACCACTC +
Preference number: 4 (lower is better)
Translates to: KPNQHHIPAPLDFLGTKTQDGPH*IQFKPL
Trigger: GAGTGGTTTGAATTGGATGCAGTGTGGGCCATCCTG...AGTCTTTGTCCCTAGGAAATCCAAAGGGGCTGGAATATGGTGTTGGTTTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR GCA 90 bp ATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAAGGGGTAGAGGAAGCTaGGAGAAAGGCTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: IYLVSHGISNMLLSLRNGRGRGS*EKGSGS
Trigger: GCTCCCAGAGCCTTTCTCGCAGCTTCCTCTACCCCT...TCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493838.1
CDS-3UTR CCA 90 bp TATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGACAGTGGTCAACCTCTaGTCCCCCTTGACCCTGGTC +
Preference number: 4 (lower is better)
Translates to: YIFGFPRHLKHASVTEKWTVVNL*SPLTLV
Trigger: GACCAGGGTCAAGGGGGACCAGAGGTTGACCACTGT...CCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CCA 90 bp GTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGAGTATCATTCCAGGATaGCCCACACTGCATCCAATT +
Preference number: 4 (lower is better)
Translates to: VVSKVLWQLTEQHLETQESIIPG*PTLHPI
Trigger: AATTGGATGCAGTGTGGGCCATCCTGGAATGATACT...CTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR TCA 90 bp GAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGATGCATATTGTTTTGTCTTCAGCACATCTTGCCACTaGACTTGCCGTAGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: ENGSWVYSCSPDAYCFVFSTSCH*TCRSQQ
Trigger: TTGCTGGCTACGGCAAGTTCAGTGGCAAGATGTGCT...GAAGACAAAACAATATGCATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp ATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTGATAGCAACAGGTCCGGTTaGTTCTTCACTGATGGAAAT +
Preference number: 4 (lower is better)
Translates to: MLLSLRNGDCLLATGPVDSNRSG*FFTDGN
Trigger: ATTTCCATCAGTGAAGAATCAACCGGACCTGTTGCT...ATCAACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR TCA 90 bp TTAATTGAATTGGTTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTTCCCTACAGGAGTCATaGGCAAAGGGAAACGAGTGT +
Preference number: 4 (lower is better)
Translates to: LIELVGSPCSGQQSPLATSLQES*AKGNEC
Trigger: ACACTCGTTTCCCTTTGCTCATGACTCCTGTAGGGA...AGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAACCAATTCAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp GGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTAAACACAGACACATTTaGAACATTCCTCGGATGCCA +
Preference number: 4 (lower is better)
Translates to: GQQSPLATDRTTSGDSGAKHRHI*NIPRMP
Trigger: TGGCATCCGAGGAATGTTTCAAATGTGTCTGTGTTT...AGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR GCA 90 bp ATTATTATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAGCAGCTCCGGCGGTCTaGCCGGCACTTTTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: IIIYLVSHGISNMLLSLRAAPAV*PALFAD
Trigger: ATCTGCAAAAAGTGCCGGGCAGACCGCCGGAGCTGC...TCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATAATAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR GCA 90 bp GTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGAACTGCCCGTCATTTTaGCTGAGGAAAGAATCCAAT +
Preference number: 4 (lower is better)
Translates to: VVSKVLWQLTEQHLETQENCPSF*LRKESN
Trigger: ATTGGATTCTTTCCTCAGGCAAAATGACGGGCAGTT...CTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp TTAATTGAATTGGTTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTCACAGTCTTGAGACTTaGCGGGTTCCGGATCATCTT +
Preference number: 4 (lower is better)
Translates to: LIELVGSPCSGQQSPLATHSLET*RVPDHL
Trigger: AAGATGATCCGGAACCCGGCAAGTCTCAAGACTGTG...AGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAACCAATTCAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp TATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGCACGGCGGTGATGGTTaGCACAGTCTTGAGACTTGC +
Preference number: 4 (lower is better)
Translates to: YIFGFPRHLKHASVTEKWHGGDG*HSLETC
Trigger: GCAAGTCTCAAGACTGTGGCAACCATCACCGCCGTG...CCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR GCA 90 bp AGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGATGCATATTGTTTTGTCTTCACACGGCGGTGATGGTTaGCACAGTCTTGAGACTTGC +
Preference number: 4 (lower is better)
Translates to: RMGAGFTLVLLMHIVLSSHGGDG*HSLETC
Trigger: GCAAGTCTCAAGACTGTGGCAACCATCACCGCCGTG...TGAAGACAAAACAATATGCATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp TTAATTGAATTGGTTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTTTGGTTGGATCCCCATaGAGTGGTCAGCAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: LIELVGSPCSGQQSPLATLVGSP*SGQQSP
Trigger: AGGACTTTGCTGACCACTGCATGGGGATCCAACCAA...AGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAACCAATTCAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp GGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGATGACATATGTGTGCTTTTaGACACGGAAACAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: GNCSPLRMGAGFTLVLLMTYVCF*TRKQVF
Trigger: AAAAACCTGTTTCCGTGTGCAAAAGCACACATATGT...CATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR CCA 90 bp TTAATTGAATTGGTTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTCCTGGTAGGTGCGGATaGTGTTCAGGTTTTCATCGT +
Preference number: 4 (lower is better)
Translates to: LIELVGSPCSGQQSPLATPGRCG*CSGFHR
Trigger: ACGATGAAAACCTGAACACCATCCGCACCTACCAGG...AGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAACCAATTCAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp GGGACAAAGACTTCCCAGTTCTTCTTTCTTGTTTGCATCTGTTACGAACAAGCATCTTCTGATGTCATCTaGGTGACCAGCTGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GTKTSQFFFLVCICYEQASSDVI*VTSWRE
Trigger: CTCCCTCCAGCTGGTCACCCAGATGACATCAGAAGA...TGCTTGTTCGTAACAGATGCAAACAAGAAAGAAGAACTGGGAAGTCTTTGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR CCA 90 bp GCCAACCAGAAAGCCAAACCAACACCATATTCCAGCCCCTTTGGATTTCCTAGGGTCAGCAAAGTCCTTTaGCAACTGACAGAACAACAT +
Preference number: 4 (lower is better)
Translates to: ANQKAKPTPYSSPFGFPRVSKVL*QLTEQH
Trigger: ATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGAC...CCTAGGAAATCCAAAGGGGCTGGAATATGGTGTTGGTTTGGCTTTCTGGTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR TCA 90 bp AGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGATGCATATTGTTTTGTCTTCACGTTGCAGTAGAGTTTaGTGGGCACGTCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: RMGAGFTLVLLMHIVLSSRCSRV*WARPLP
Trigger: AGGAAGTGGACGTGCCCATCAAACTCTACTGCAACG...TGAAGACAAAACAATATGCATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp AACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTGGCACTTTTTGCAGATaGTGTTGTAGGTCACATCAT +
Preference number: 4 (lower is better)
Translates to: NMLLSLRNGDCLLATGPVGTFCR*CCRSHH
Trigger: ATGATGTGACCTACAACATCATCTGCAAAAAGTGCC...AACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR TCA 90 bp TATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGCACATCTTGCCACTaGACTTGCCGTAGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: YIFGFPRHLKHASVTEKWSTSCH*TCRSQQ
Trigger: TTGCTGGCTACGGCAAGTTCAGTGGCAAGATGTGCT...CCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR TCA 90 bp GAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGATGCATATTGTTTTGTCTTCCTGCTCCCTCAGCTCTaGCTTGTAATCATCGTCAGT +
Preference number: 4 (lower is better)
Translates to: ENGSWVYSCSPDAYCFVFLLPQL*LVIIVS
Trigger: ACTGACGATGATTACAAGTCAGAGCTGAGGGAGCAG...GAAGACAAAACAATATGCATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp TTTATTATTATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGCAGCAGCGATGCCCCTaGGCATACCCACAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: FIIIYLVSHGISNMLLSLQQRCP*AYPQAG
Trigger: TCCAGCTTGTGGGTATGCTCAGGGGCATCGCTGCTG...CAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATAATAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR TCA 90 bp TTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTGGGTTTTGTTTGAAGAAGTCCTTTGGCAACTaGCAGAACAACATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LATDRTTSGDSGAGFCLKKSFGN*QNNIWR
Trigger: TCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTT...CTTCAAACAAAACCCAGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp CTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGATGCATATCAGATTCCAGTGATGTaGAAGAACATTCTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: LQPTENGSWVYSCSPDAYQIPVM*KNILQK
Trigger: TTTCTGGAGAATGTTCTTTCACATCACTGGAATCTG...ATATGCATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR GCA 90 bp TATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGGTACCACATATACCATaGCAGGCCGCAGCCCATCAA +
Preference number: 4 (lower is better)
Translates to: YIFGFPRHLKHASVTEKWVPHIP*QAAAHQ
Trigger: TTGATGGGCTGCGGCCTGGCATGGTATATGTGGTAC...CCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR GCA 90 bp ATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGATGGATCACGGTGAACTaGCCGTCATTTTGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: IYLVSHGISNMLLSLRNGWITVN*PSFCLR
Trigger: CCTCAGGCAAAATGACGGGCAGTTCACCGTGATCCA...TCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR GCA 90 bp TATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATCACAGTCTTGAGACTTaGCGGGTTCCGGATCATCTT +
Preference number: 4 (lower is better)
Translates to: YLVSHGISNMLLSLRNGDHSLET*RVPDHL
Trigger: AAGATGATCCGGAACCCGGCAAGTCTCAAGACTGTG...ATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CCA 90 bp TTAATTGAATTGGTTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTGCCAATTGTTCTGGTTaGGCTCGAAGACATTGCACA +
Preference number: 4 (lower is better)
Translates to: LIELVGSPCSGQQSPLATANCSG*ARRHCT
Trigger: TGTGCAATGTCTTCGAGCCCAACCAGAACAATTGGC...AGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAACCAATTCAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp GGGACAAAGACTTCCCAGTTCTTCTTTCTTGTTTGCATCTGTTACGAACAAGCATCGTCAGTCAGAGTCTaGAAGCACATCTTGCCACTG +
Preference number: 4 (lower is better)
Translates to: GTKTSQFFFLVCICYEQASSVRV*KHILPL
Trigger: CAGTGGCAAGATGTGCTTCCAGACTCTGACTGACGA...TGCTTGTTCGTAACAGATGCAAACAAGAAAGAAGAACTGGGAAGTCTTTGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR CCA 90 bp TATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTCGTCAGTCAGAGTCTaGAAGCACATCTTGCCACTG +
Preference number: 4 (lower is better)
Translates to: YLVSHGISNMLLSLRNGDSSVRV*KHILPL
Trigger: CAGTGGCAAGATGTGCTTCCAGACTCTGACTGACGA...ATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CCA 90 bp TATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATAAGCTGTCCCTGTACTaGACCATTTTGATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: YLVSHGISNMLLSLRNGDKLSLY*TILMAL
Trigger: CAGCGCCATCAAAATGGTCCAGTACAGGGACAGCTT...ATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
3UTR CAA 72 bp AGAACAACATCTGGAGACTCAGGAGCTGGGTTTTGTTaGAAGAAACTTCCCTACAGGAGTCATGAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: RTTSGDSGAGFC*KKLPYRSHEQR
Trigger: CCTTTGCTCATGACTCCTGTAGGGAAGTTTCTTCAAACAAAACCCAGCTCCTGAGTCTCCAGATGTTGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp ATTATTATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGATTTCATCGTAGCCACTaGCTTCTTCCCACCCGGACG +
Preference number: 4 (lower is better)
Translates to: IIIYLVSHGISNMLLSLRFHRSH*LLPTRT
Trigger: CGTCCGGGTGGGAAGAAGTCAGTGGCTACGATGAAA...TCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATAATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR TCA 90 bp GAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGATGCATATTGTTTTGTCTTCACTCCCCTGCTCCGATaGCCTCTTCAATTTTCACAA +
Preference number: 4 (lower is better)
Translates to: ENGSWVYSCSPDAYCFVFTPLLR*PLQFSQ
Trigger: TTGTGAAAATTGAAGAGGTCATCGGAGCAGGGGAGT...GAAGACAAAACAATATGCATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp ATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGCCCGTCATTTTGCCTaGGGAAAGAATCCAATGCAC +
Preference number: 4 (lower is better)
Translates to: IYLVSHGISNMLLSLRNGARHFA*GKNPMH
Trigger: GTGCATTGGATTCTTTCCTCAGGCAAAATGACGGGC...TCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR TCA 90 bp AGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGATGCATATTGTTTTGTCTTCATCTTATCTAGGGTGTTaGCAATCTCCGCAAACCGGG +
Preference number: 4 (lower is better)
Translates to: RMGAGFTLVLLMHIVLSSSYLGC*QSPQTG
Trigger: CCCGGTTTGCGGAGATTGTCAACACCCTAGATAAGA...TGAAGACAAAACAATATGCATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp TATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAATGCATTCCTCAGCTaGGAAGCCAGTCTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: YIFGFPRHLKHASVTEKWNAFLS*EASLSS
Trigger: ACTGGAGAGACTGGCTTCTCAGCTGAGGAATGCATT...CCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR TCA 90 bp GTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGTATGAAGACATTAATTaGATTGGTTGGATCCCCATG +
Preference number: 4 (lower is better)
Translates to: VVSKVLWQLTEQHLETQEYEDIN*IGWIPM
Trigger: CATGGGGATCCAACCAATTCAATTAATGTCTTCATA...CTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp ATTATTATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGATGGGCTCGAAGACATTaGACACCTGGTAGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: IIIYLVSHGISNMLLSLRWARRH*TPGRCG
Trigger: TCCGCACCTACCAGGTGTGCAATGTCTTCGAGCCCA...TCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATAATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR GCA 90 bp ATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGACAGCCCATCAATCCTTaGTGTGTTGGTCTGACTCCT +
Preference number: 4 (lower is better)
Translates to: IYLVSHGISNMLLSLRNGQPINP*CVGLTP
Trigger: AGGAGTCAGACCAACACAGCAAGGATTGATGGGCTG...TCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR GCA 90 bp ATTATTATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAGGGAGCCTCGGCCTGTaGTGTAATGCTGGAGCTTAT +
Preference number: 4 (lower is better)
Translates to: IIIYLVSHGISNMLLSLRGSLGL*CNAGAY
Trigger: ATAAGCTCCAGCATTACAGCACAGGCCGAGGCTCCC...TCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATAATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR GCA 90 bp GTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGAAGAAAATGGAACACTaGTTCTGTTTCTTCCCTCTA +
Preference number: 4 (lower is better)
Translates to: VVSKVLWQLTEQHLETQEKKMEH*FCFFPL
Trigger: TAGAGGGAAGAAACAGAAGCAGTGTTCCATTTTCTT...CTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp TTAATTGAATTGGTTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTACTGAGAATGGGAGCTaGGTTTACTCTTGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LIELVGSPCSGQQSPLATTENGS*VYSCSP
Trigger: AGGAGAACAAGAGTAAACCCAGCTCCCATTCTCAGT...AGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAACCAATTCAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp AAGCCAAACCAACACCATATTCCAGCCCCTTTGGATTTCCTAGGGACAAAGACTTGGAGACTCAGGAGCTaGGTTTTGTTTGAAGAAACT +
Preference number: 4 (lower is better)
Translates to: KPNQHHIPAPLDFLGTKTWRLRS*VLFEET
Trigger: AGTTTCTTCAAACAAAACCCAGCTCCTGAGTCTCCA...AGTCTTTGTCCCTAGGAAATCCAAAGGGGCTGGAATATGGTGTTGGTTTGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR CCA 90 bp TTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTGGGTTTTGTTTGAAGGTCAGCAAAGTCCTTTaGCAACTGACAGAACAACAT +
Preference number: 4 (lower is better)
Translates to: LATDRTTSGDSGAGFCLKVSKVL*QLTEQH
Trigger: ATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGAC...CTTCAAACAAAACCCAGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp TTTATTATTATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGCTGCCTTCAGGGTCTTaGTGGCCACGTAGATTTCCC +
Preference number: 4 (lower is better)
Translates to: FIIIYLVSHGISNMLLSLLPSGS*WPRRFP
Trigger: GGGAAATCTACGTGGCCATCAAGACCCTGAAGGCAG...CAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATAATAATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR TCA 90 bp ATTATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATTGCCATTGCCGTTGGTaGCTGACTTATCTGGACCCT +
Preference number: 4 (lower is better)
Translates to: IIYLVSHGISNMLLSLRNCHCRW*LTYLDP
Trigger: AGGGTCCAGATAAGTCAGTCACCAACGGCAATGGCA...ATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR TCA 90 bp GAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGATGCATATTGTTTTGTCTTCAGCAACAGGTCCGGTTaGTTCTTCACTGATGGAAAT +
Preference number: 4 (lower is better)
Translates to: ENGSWVYSCSPDAYCFVFSNRSG*FFTDGN
Trigger: ATTTCCATCAGTGAAGAATCAACCGGACCTGTTGCT...GAAGACAAAACAATATGCATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp TTTATTATTATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGGGGAGCCTCGGCCTGTaGTGTAATGCTGGAGCTTAT +
Preference number: 4 (lower is better)
Translates to: FIIIYLVSHGISNMLLSLGSLGL*CNAGAY
Trigger: ATAAGCTCCAGCATTACAGCACAGGCCGAGGCTCCC...CAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATAATAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR GCA 90 bp TTAATTGAATTGGTTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTAACTGCCCGTCATTTTaGCTGAGGAAAGAATCCAAT +
Preference number: 4 (lower is better)
Translates to: LIELVGSPCSGQQSPLATNCPSF*LRKESN
Trigger: ATTGGATTCTTTCCTCAGGCAAAATGACGGGCAGTT...AGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAACCAATTCAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp ATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGACTTCTTCTGATGGCCTaGCAAGGTGATGCCTATTCT +
Preference number: 4 (lower is better)
Translates to: IYLVSHGISNMLLSLRNGLLLMA*QGDAYS
Trigger: AGAATAGGCATCACCTTGGCAGGCCATCAGAAGAAG...TCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CCA 90 bp ATTATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATCAGTACATTCCACAGTaGTCAACCTCTGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: IIYLVSHGISNMLLSLRNQYIPQ*STSGPP
Trigger: AGGGGGACCAGAGGTTGACCACTGTGGAATGTACTG...ATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CCA 90 bp GAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGATGCATATTGTTTTGTCTTCTCTGTCACTGAGAAATaGAGATTGCCTGCTAGCAAC +
Preference number: 4 (lower is better)
Translates to: ENGSWVYSCSPDAYCFVFSVTEK*RLPASN
Trigger: GTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGA...GAAGACAAAACAATATGCATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CCA 90 bp TTAATTGAATTGGTTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTTGGAGACTCAGGAGCTaGGTTTTGTTTGAAGAAACT +
Preference number: 4 (lower is better)
Translates to: LIELVGSPCSGQQSPLATWRLRS*VLFEET
Trigger: AGTTTCTTCAAACAAAACCCAGCTCCTGAGTCTCCA...AGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAACCAATTCAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR TCA 90 bp ATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGATGGACCCTCATAGAATaGATGCTGTTCAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: IYLVSHGISNMLLSLRNGWTLIE*MLFRIF
Trigger: GAAGATCCTGAACAGCATTCATTCTATGAGGGTCCA...TCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR TCA 90 bp TTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTGGGTTTTGTTTGAAGTATGAAGACATTAATTaGATTGGTTGGATCCCCATG +
Preference number: 4 (lower is better)
Translates to: LATDRTTSGDSGAGFCLKYEDIN*IGWIPM
Trigger: CATGGGGATCCAACCAATTCAATTAATGTCTTCATA...CTTCAAACAAAACCCAGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp TTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTGGGTTTTGTTTGAAGAAGAAAATGGAACACTaGTTCTGTTTCTTCCCTCTA +
Preference number: 4 (lower is better)
Translates to: LATDRTTSGDSGAGFCLKKKMEH*FCFFPL
Trigger: TAGAGGGAAGAAACAGAAGCAGTGTTCCATTTTCTT...CTTCAAACAAAACCCAGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR GCA 90 bp AACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTTTCTTCTTTCTTGTTTaGATCTGTTACGAACAAGCA +
Preference number: 4 (lower is better)
Translates to: NMLLSLRNGDCLLATGPVFFFLV*ICYEQA
Trigger: TGCTTGTTCGTAACAGATGCAAACAAGAAAGAAGAA...AACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR TCA 90 bp TTTATTATTATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGCTGCTCCCTCAGCTCTaGCTTGTAATCATCGTCAGT +
Preference number: 4 (lower is better)
Translates to: FIIIYLVSHGISNMLLSLLLPQL*LVIIVS
Trigger: ACTGACGATGATTACAAGTCAGAGCTGAGGGAGCAG...CAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATAATAATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR TCA 90 bp ATTATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATTGGGATCCTCGTAAGTaGAGGGGTCAATGTAGATCT +
Preference number: 4 (lower is better)
Translates to: IIYLVSHGISNMLLSLRNWDPRK*RGQCRS
Trigger: AGATCTACATTGACCCCTTCACTTACGAGGATCCCA...ATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR TCA 90 bp ATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGATCCCTTGTCACTTCTTaGATTGCAGATTCCAGTGAT +
Preference number: 4 (lower is better)
Translates to: IYLVSHGISNMLLSLRNGSLVTS*IADSSD
Trigger: ATCACTGGAATCTGCAATTCAAGAAGTGACAAGGGA...TCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR GCA 90 bp ATTATTATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGATGTACACAGCCTCTTTaGTATAAGCCCGTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: IIIYLVSHGISNMLLSLRCTQPL*YKPVSC
Trigger: GCAGGAAACGGGCTTATAGCAAAGAGGCTGTGTACA...TCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATAATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR GCA 90 bp ATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAAACTGCCCGTCATTTTaGCTGAGGAAAGAATCCAAT +
Preference number: 4 (lower is better)
Translates to: IYLVSHGISNMLLSLRNGNCPSF*LRKESN
Trigger: ATTGGATTCTTTCCTCAGGCAAAATGACGGGCAGTT...TCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CCA 90 bp ATTATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGCCAATTGTTCTGGTTaGGCTCGAAGACATTGCACA +
Preference number: 4 (lower is better)
Translates to: IIYLVSHGISNMLLSLRNANCSG*ARRHCT
Trigger: TGTGCAATGTCTTCGAGCCCAACCAGAACAATTGGC...ATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR CCA 90 bp ATTATTATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAGCAGCCAATTGTTCTaGTTGGGCTCGAAGACATTG +
Preference number: 4 (lower is better)
Translates to: IIIYLVSHGISNMLLSLRSSQLF*LGSKTL
Trigger: CAATGTCTTCGAGCCCAACCAGAACAATTGGCTGCT...TCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATAATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR TCA 90 bp ATTATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATCGGTTGATTCTTCACTaGTGGAAATGCATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: IIYLVSHGISNMLLSLRNRLILH*WKCIPQ
Trigger: CTGAGGAATGCATTTCCATCAGTGAAGAATCAACCG...ATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR TCA 90 bp TATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATAACGAGGTTTTCAATTaGAGGTACATCTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: YLVSHGISNMLLSLRNGDNEVFN*RYISSS
Trigger: TGAAGAAGAGATGTACCTTCAATTGAAAACCTCGTT...ATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR TCA 90 bp ATTATTATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAGGCACTTTTTGCAGATaGTGTTGTAGGTCACATCAT +
Preference number: 4 (lower is better)
Translates to: IIIYLVSHGISNMLLSLRGTFCR*CCRSHH
Trigger: ATGATGTGACCTACAACATCATCTGCAAAAAGTGCC...TCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATAATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CCA 90 bp TTTATTATTATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGTCTGTCACTGAGAAATaGAGATTGCCTGCTAGCAAC +
Preference number: 4 (lower is better)
Translates to: FIIIYLVSHGISNMLLSLSVTEK*RLPASN
Trigger: GTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGA...CAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATAATAATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS CCA 90 bp TCGCGCTCTCGCCCGGACCGGACTTCCCGGAGCGCTGCGTGGGCGTaGGCAGGAGTGTGTGCGCGTGGGGCGGTGCGGGCGCGCGTGGGT +
Preference number: 5 (lower is better)
Translates to: SRSRPDRTSRSAAWA*AGVCARGAVRARVG
Trigger: ACCCACGCGCGCCCGCACCGCCCCACGCGCACACACTCCTGCCCACGCCCACGCAGCGCTCCGGGAAGTCCGGTCCGGGCGAGAGCGCGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398015.8
ENST00000482618.5
ENST00000647596.1
CDS GCA 90 bp GCCGAGGCAGCAGCGCCGGGAGAGCGCCGCGTCCCAGGGCGCCGCTaGGCTCTCCGCGGGTGGCTTCTCGGTATCCTTTCGCGCTCTCGC +
Preference number: 5 (lower is better)
Translates to: AEAAAPGERRVPGRR*ALRGWLLGILSRSR
Trigger: GCGAGAGCGCGAAAGGATACCGAGAAGCCACCCGCGGAGAGCGCAGCGGCGCCCTGGGACGCGGCGCTCTCCCGGCGCTGCTGCCTCGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398015.8
ENST00000482618.5
ENST00000647596.1
CDS CCA 90 bp ATCCTTTCGCGCTCTCGCCCGGACCGGACTTCCCGGAGCGCTGCGTaGGCGTGGGCAGGAGTGTGTGCGCGTGGGGCGGTGCGGGCGCGC +
Preference number: 5 (lower is better)
Translates to: ILSRSRPDRTSRSAA*AWAGVCARGAVRAR
Trigger: GCGCGCCCGCACCGCCCCACGCGCACACACTCCTGCCCACGCCCACGCAGCGCTCCGGGAAGTCCGGTCCGGGCGAGAGCGCGAAAGGAT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398015.8
ENST00000482618.5
ENST00000647596.1
CDS GCA 90 bp GGACCGGACTTCCCGGAGCGCTGCGTGGGCGTGGGCAGGAGTGTGTaGGCGTGGGGCGGTGCGGGCGCGCGTGGGTGTGGGTGTGCATGT +
Preference number: 5 (lower is better)
Translates to: GPDFPERCVGVGRSV*AWGGAGARGCGCAC
Trigger: ACATGCACACCCACACCCACGCGCGCCCGCACCGCCCCACGCGCACACACTCCTGCCCACGCCCACGCAGCGCTCCGGGAAGTCCGGTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398015.8
ENST00000482618.5
ENST00000647596.1
CDS CCA 90 bp CCGGGAGAGCGCCGCGTCCCAGGGCGCCGCTGCGCTCTCCGCGGGTaGCTTCTCGGTATCCTTTCGCGCTCTCGCCCGGACCGGACTTCC +
Preference number: 5 (lower is better)
Translates to: PGERRVPGRRCALRG*LLGILSRSRPDRTS
Trigger: GGAAGTCCGGTCCGGGCGAGAGCGCGAAAGGATACCGAGAAGCCACCCGCGGAGAGCGCAGCGGCGCCCTGGGACGCGGCGCTCTCCCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398015.8
ENST00000482618.5
ENST00000647596.1
CDS TCA 90 bp CGCAGGCGCCCGGACCACCAGACTGGTCCCCAAGGGTACGGCCAATaGACTCCACCCCTCTCCTTCGGCGGCCACTTGCGGGATACCACG +
Preference number: 5 (lower is better)
Translates to: RRRPDHQTGPQGYGQ*TPPLSFGGHLRDTT
Trigger: CGTGGTATCCCGCAAGTGGCCGCCGAAGGAGAGGGGTGGAGTTCATTGGCCGTACCCTTGGGGACCAGTCTGGTGGTCCGGGCGCCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497173.5
CDS GCA 90 bp ACTTGCGGGATACCACGGCAGAGCTTCTCCGGCCCCCGCGCGCAGTaGTTGCACGCCAAGCAGAGTCCACTAGCCCGTGGACTGCGAGCT +
Preference number: 5 (lower is better)
Translates to: TCGIPRQSFSGPRAQ*LHAKQSPLARGLRA
Trigger: AGCTCGCAGTCCACGGGCTAGTGGACTCTGCTTGGCGTGCAAGCACTGCGCGCGGGGGCCGGAGAAGCTCTGCCGTGGTATCCCGCAAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497173.5
CDS CCA 90 bp CGAGGGAGAACGAGCCTGGGAGAGCGCGCGAGAGCGAGTGCGTCCTaGTGTCACATTGCTAGCTACAGCGGAGCCTACGGGAGGACGGAG +
Preference number: 5 (lower is better)
Translates to: RGRTSLGERARASAS*CHIASYSGAYGRTE
Trigger: CTCCGTCCTCCCGTAGGCTCCGCTGTAGCTAGCAATGTGACACCAGGACGCACTCGCTCTCGCGCGCTCTCCCAGGCTCGTTCTCCCTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000482618.5
CDS TCA 90 bp GTTCCAAGGCTCAAGAGGCGAAAAGGGTTTCCACCTCTCCCCGACTaGCCCTGGAAACCTGCAGTCCCGCAGGCGCCCGGACCACCAGAC +
Preference number: 5 (lower is better)
Translates to: VPRLKRRKGFPPLPD*PWKPAVPQAPGPPD
Trigger: GTCTGGTGGTCCGGGCGCCTGCGGGACTGCAGGTTTCCAGGGTCAGTCGGGGAGAGGTGGAAACCCTTTTCGCCTCTTGAGCCTTGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497173.5
CDS-3UTR CAA 90 bp ACAGGTGCAGATGGGAGACGCCTCTGCAGGGGAGCGGCTGTTGGAGGGGCAGTGAAAGGCCTGGACACCTaGCATGCCACGCTGTTCTCA +
Preference number: 5 (lower is better)
Translates to: TGADGRRLCRGAAVGGAVKGLDT*HATLFS
Trigger: TGAGAACAGCGTGGCATGCAAGGTGTCCAGGCCTTT...CACTGCCCCTCCAACAGCCGCTCCCCTGCAGAGGCGTCTCCCATCTGCACCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS TCA 90 bp CACAGCGGGAGCAGCTCCGGCGGTCTGCCCGGCACTTTTTGCAGATaGTGTTGTAGGTCACATCATCCCGCCCACCTGTCTCCCTTGGAG +
Preference number: 5 (lower is better)
Translates to: HSGSSSGGLPGTFCR*CCRSHHPAHLSPLE
Trigger: CTCCAAGGGAGACAGGTGGGCGGGATGATGTGACCTACAACATCATCTGCAAAAAGTGCCGGGCAGACCGCCGGAGCTGCTCCCGCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398015.8
ENST00000493838.1
ENST00000647596.1
CDS GCA 90 bp GGGAGGCAGGTAGCCTGGGGCAAGTTCTTAGCCCTCCTTGCCCACTaGCTGGAAACTGACTCCGTGCTGTTAGAGGGGGATGGTGGGAGT +
Preference number: 5 (lower is better)
Translates to: GRQVAWGKFLALLAH*LETDSVLLEGDGGS
Trigger: ACTCCCACCATCCCCCTCTAACAGCACGGAGTCAGTTTCCAGGCAGTGGGCAAGGAGGGCTAAGAACTTGCCCCAGGCTACCTGCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493838.1
CDS-3UTR CAA 90 bp GGACCTGATGGGACGCTAGTGCATGCCACTTCTGGAGGGTCAAAGTCCGCTCGGTCCACTTCCTCTGCGTaGGGGATGCATGTGCCCCGA +
Preference number: 5 (lower is better)
Translates to: GPDGTLVHATSGGSKSARSTSSA*GMHVPR
Trigger: TCGGGGCACATGCATCCCCAACGCAGAGGAAGTGGA...CCGAGCGGACTTTGACCCTCCAGAAGTGGCATGCACTAGCGTCCCATCAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR CAA 90 bp ATGGAGATAACATTGCGGGGACCTGATGGGACGCTAGTGCATGCCACTTCTGGACACCCGGACGCAGGATaGGCCGTCCAGCCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: MEITLRGPDGTLVHATSGHPDAG*AVQPSS
Trigger: AGAGCTGGGCTGGACGGCCAATCCTGCGTCCGGGTG...TCCAGAAGTGGCATGCACTAGCGTCCCATCAGGTCCCCGCAATGTTATCTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR CAA 90 bp GTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTCACCCGGACGCAGGATaGGCCGTCCAGCCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: VGQLQPTENGSWVYSCSPHPDAG*AVQPSS
Trigger: AGAGCTGGGCTGGACGGCCAATCCTGCGTCCGGGTG...AGGAGAACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS CCA 90 bp AATACAGGGGTAGAGGAAGCTGCGAGAAAGGCTCTGGGAGCCCACTaGGTTCCCCAAGCAGGAAATTCCTGCCTGGCACCACAGGGATCC +
Preference number: 5 (lower is better)
Translates to: NTGVEEAARKALGAH*VPQAGNSCLAPQGS
Trigger: GGATCCCTGTGGTGCCAGGCAGGAATTTCCTGCTTGGGGAACCCAGTGGGCTCCCAGAGCCTTTCTCGCAGCTTCCTCTACCCCTGTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493838.1
CDS-3UTR CAA 90 bp CCCTTTCTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTATGACAGGCCGACTCTaGGTGACCACACCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: PFLPVVGQLQPTENGSWVMTGRL*VTTPSR
Trigger: CCTGGAGGGTGTGGTCACCAAGAGTCGGCCTGTCAT...AACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAGAAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp CTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTCCACTTCCTCTGCGTaGGGGATGCATGTGCCCCGA +
Preference number: 5 (lower is better)
Translates to: LPVVGQLQPTENGSWVYSSTSSA*GMHVPR
Trigger: TCGGGGCACATGCATCCCCAACGCAGAGGAAGTGGA...AGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS GCA 90 bp TGTGGCCATGACAAGGTGATGCTCCTCATAGTGGCACTGACTTGGTaGATGATGGGAACGGTGGAGGGGGCGGCTTGGTTTGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: CGHDKVMLLIVALTW*MMGTVEGAAWFVVM
Trigger: CATCACCACAAACCAAGCCGCCCCCTCCACCGTTCCCATCATGCACCAAGTCAGTGCCACTATGAGGAGCATCACCTTGTCATGGCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398015.8
ENST00000488992.1
ENST00000493838.1
ENST00000647596.1
CDS-3UTR CAA 90 bp GTATCATTCCAGGATGGCCCACACTGCATCCAATTCAAACCACTCACCTGTTTCCACCCGGACGCAGGATaGGCCGTCCAGCCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: VSFQDGPHCIQFKPLTCFHPDAG*AVQPSS
Trigger: AGAGCTGGGCTGGACGGCCAATCCTGCGTCCGGGTG...GAAACAGGTGAGTGGTTTGAATTGGATGCAGTGTGGGCCATCCTGGAATGATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR CAA 90 bp CCCTTTCTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTGCAGCCCATCAATCCTaGCTGTGTTGGTCTGACTCC +
Preference number: 5 (lower is better)
Translates to: PFLPVVGQLQPTENGSWVAAHQS*LCWSDS
Trigger: GGAGTCAGACCAACACAGCAAGGATTGATGGGCTGC...AACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAGAAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp CTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTAACCTCTGGTCCCCCTaGACCCTGGTCCTTTTCCCT +
Preference number: 5 (lower is better)
Translates to: LPVVGQLQPTENGSWVYSNLWSP*TLVLFP
Trigger: AGGGAAAAGGACCAGGGTCAAGGGGGACCAGAGGTT...AGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS TCA 90 bp AGCTTCCTGGCTGGCCTTGAATGTCCCTGCAGGGCAAGCTGGAGCTaGGTCAATTTAGAGAGCCGAGCGAAATACAGGGGTAGAGGAAGC +
Preference number: 5 (lower is better)
Translates to: SFLAGLECPCRASWS*VNLESRAKYRGRGS
Trigger: GCTTCCTCTACCCCTGTATTTCGCTCGGCTCTCTAAATTGACTCAGCTCCAGCTTGCCCTGCAGGGACATTCAAGGCCAGCCAGGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493838.1
CDS-3UTR CAA 90 bp CTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTACGATGGAGATAACATaGCGGGGACCTGATGGGACG +
Preference number: 5 (lower is better)
Translates to: LPVVGQLQPTENGSWVYSTMEIT*RGPDGT
Trigger: CGTCCCATCAGGTCCCCGCAATGTTATCTCCATCGT...AGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp GCATGCCACTTCTGGAGGGTCAAAGTCCGCTCGGTAATAACCGGTCCGACAGGTCAGAAGGCTGACTTCTaGGTGGCAATGACAGAGTCA +
Preference number: 5 (lower is better)
Translates to: ACHFWRVKVRSVITGPTGQKADF*VAMTES
Trigger: TGACTCTGTCATTGCCACCAAGAAGTCAGCCTTCTG...ACCTGTCGGACCGGTTATTACCGAGCGGACTTTGACCCTCCAGAAGTGGCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR CAA 90 bp TCATTGACGATGGAGATAACATTGCGGGGACCTGATGGGACGCTAGTGCATGCCACGATGGAGATAACATaGCGGGGACCTGATGGGACG +
Preference number: 5 (lower is better)
Translates to: SLTMEITLRGPDGTLVHATMEIT*RGPDGT
Trigger: CGTCCCATCAGGTCCCCGCAATGTTATCTCCATCGT...GGCATGCACTAGCGTCCCATCAGGTCCCCGCAATGTTATCTCCATCGTCAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR CAA 90 bp AAGAAACTTCCCTACAGGAGTCATGAGCAAAGGGAAACGAGTGTGGGAGAAGGGGGTGGAGGGGGCGGCTaGGTTTGTGGTGATGTTGAC +
Preference number: 5 (lower is better)
Translates to: KKLPYRSHEQRETSVGEGGGGGG*VCGDVD
Trigger: GTCAACATCACCACAAACCAAGCCGCCCCCTCCACC...CCCTTCTCCCACACTCGTTTCCCTTTGCTCATGACTCCTGTAGGGAAGTTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp CTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTCATAGTGGCACTGACTaGGTGCATGATGGGAACGGT +
Preference number: 5 (lower is better)
Translates to: LPVVGQLQPTENGSWVYSHSGTD*VHDGNG
Trigger: ACCGTTCCCATCATGCACCAAGTCAGTGCCACTATG...AGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp TTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTTCCACTTCCTCTGCGTaGGGGATGCATGTGCCCCGA +
Preference number: 5 (lower is better)
Translates to: FPRHLKHASVTEKWRLPASTSSA*GMHVPR
Trigger: TCGGGGCACATGCATCCCCAACGCAGAGGAAGTGGA...AGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR CAA 90 bp TTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCCTGCAGGGCAAGCCTaGCATGCCACGCTGTTCTCA +
Preference number: 5 (lower is better)
Translates to: LDPHAVVSKVLWQLTEQHPAGQA*HATLFS
Trigger: TGAGAACAGCGTGGCATGCAAGGCTTGCCCTGCAGG...ATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp ATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTGATGGTGGAGGGGGCGGCTaGGTTTGTGGTGATGTTGAC +
Preference number: 5 (lower is better)
Translates to: MLLSLRNGDCLLATGPVDGGGGG*VCGDVD
Trigger: GTCAACATCACCACAAACCAAGCCGCCCCCTCCACC...ATCAACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CAA 90 bp CCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTCTGGCCATGGAGGAGTaGAACTCATTGTGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: PVVGQLQPTENGSWVYSCLAMEE*NSLCSF
Trigger: GAAGGAACACAATGAGTTCAACTCCTCCATGGCCAG...ACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp AAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTATGACAGGCCGACTCTaGGTGACCACACCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: KHASVTEKWRLPASNRSGMTGRL*VTTPSR
Trigger: CCTGGAGGGTGTGGTCACCAAGAGTCGGCCTGTCAT...ACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CAA 90 bp CCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTCCTGCTCGATGGCATaGATGACATCTTGGTTGGAC +
Preference number: 5 (lower is better)
Translates to: PVVGQLQPTENGSWVYSCSCSMA*MTSWLD
Trigger: GTCCAACCAAGATGTCATCAATGCCATCGAGCAGGA...ACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp GGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTAACCTCTGGTCCCCCTaGACCCTGGTCCTTTTCCCT +
Preference number: 5 (lower is better)
Translates to: GSPCSGQQSPLATDRTTSNLWSP*TLVLFP
Trigger: AGGGAAAAGGACCAGGGTCAAGGGGGACCAGAGGTT...AGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp CTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGATGCATATCCTTTCTTCCTGTGGTaGGGCAACTGCAGCCCACTG +
Preference number: 5 (lower is better)
Translates to: LQPTENGSWVYSCSPDAYPFFLW*GNCSPL
Trigger: CAGTGGGCTGCAGTTGCCCAACCACAGGAAGAAAGG...ATATGCATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS TCA 90 bp TATACCATGCCAGGCCGCAGCCCATCAATCCTTGCTGTGTTGGTCTaGCTCCTGGCCATGGAGGAGTTGAACTCATTGTGTTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: YTMPGRSPSILAVLV*LLAMEELNSLCSFS
Trigger: TGAGAAGGAACACAATGAGTTCAACTCCTCCATGGCCAGGAGTCAGACCAACACAGCAAGGATTGATGGGCTGCGGCCTGGCATGGTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398015.8
ENST00000493838.1
ENST00000647596.1
CDS-3UTR CAA 90 bp TTCTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTAGCCAATTGTTCTGGTaGGGCTCGAAGACATTGCAC +
Preference number: 5 (lower is better)
Translates to: FFLWLGNCSPLRMGAGFTSQLFW*GSKTLH
Trigger: GTGCAATGTCTTCGAGCCCAACCAGAACAATTGGCT...AGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp TCATTGACGATGGAGATAACATTGCGGGGACCTGATGGGACGCTAGTGCATGCCAGCCAATTGTTCTGGTaGGGCTCGAAGACATTGCAC +
Preference number: 5 (lower is better)
Translates to: SLTMEITLRGPDGTLVHASQLFW*GSKTLH
Trigger: GTGCAATGTCTTCGAGCCCAACCAGAACAATTGGCT...GGCATGCACTAGCGTCCCATCAGGTCCCCGCAATGTTATCTCCATCGTCAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR CAA 90 bp GGACCTGATGGGACGCTAGTGCATGCCACTTCTGGAGGGTCAAAGTCCGCTCGGAAACACTGCAAAATTTaGCACAATGCTGGGACACTT +
Preference number: 5 (lower is better)
Translates to: GPDGTLVHATSGGSKSARKHCKI*HNAGTL
Trigger: AAGTGTCCCAGCATTGTGCAAAATTTTGCAGTGTTT...CCGAGCGGACTTTGACCCTCCAGAAGTGGCATGCACTAGCGTCCCATCAGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482618.5
CDS-3UTR CAA 90 bp GTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGACGATGGAGATAACATaGCGGGGACCTGATGGGACG +
Preference number: 5 (lower is better)
Translates to: VVSKVLWQLTEQHLETQETMEIT*RGPDGT
Trigger: CGTCCCATCAGGTCCCCGCAATGTTATCTCCATCGT...CTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp CCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTATCTTATCTAGGGTGTaGACAATCTCCGCAAACCGG +
Preference number: 5 (lower is better)
Translates to: PVVGQLQPTENGSWVYSCILSRV*TISANR
Trigger: CCGGTTTGCGGAGATTGTCAACACCCTAGATAAGAT...ACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp GTATCATTCCAGGATGGCCCACACTGCATCCAATTCAAACCACTCACCTGTTTCATGGTTGCCACAGTCTaGAGACTTGCCGGGTTCCGG +
Preference number: 5 (lower is better)
Translates to: VSFQDGPHCIQFKPLTCFMVATV*RLAGFR
Trigger: CCGGAACCCGGCAAGTCTCAAGACTGTGGCAACCAT...GAAACAGGTGAGTGGTTTGAATTGGATGCAGTGTGGGCCATCCTGGAATGATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR CAA 90 bp ATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTGATATGGTTGCCACAGTCTaGAGACTTGCCGGGTTCCGG +
Preference number: 5 (lower is better)
Translates to: MLLSLRNGDCLLATGPVDMVATV*RLAGFR
Trigger: CCGGAACCCGGCAAGTCTCAAGACTGTGGCAACCAT...ATCAACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CAA 90 bp TTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATATGGTTGCCACAGTCTaGAGACTTGCCGGGTTCCGG +
Preference number: 5 (lower is better)
Translates to: LDPHAVVSKVLWQLTEQHMVATV*RLAGFR
Trigger: CCGGAACCCGGCAAGTCTCAAGACTGTGGCAACCAT...ATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp TTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAACCTCTGGTCCCCCTaGACCCTGGTCCTTTTCCCT +
Preference number: 5 (lower is better)
Translates to: FPRHLKHASVTEKWRLPANLWSP*TLVLFP
Trigger: AGGGAAAAGGACCAGGGTCAAGGGGGACCAGAGGTT...AGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CAA 90 bp TTCTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTACTGAGAAATGGAGATaGCCTGCTAGCAACAGGTCC +
Preference number: 5 (lower is better)
Translates to: FFLWLGNCSPLRMGAGFTTEKWR*PASNRS
Trigger: GGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGT...AGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS TCA 90 bp ATGCCACAGGGAGAAGGAAGTCTCCAGCTGAACTTTGTAACAATATaGACTTGTTCAGAAGCCTCCTGGCCAGAACTCAGGGGAGGGTGC +
Preference number: 5 (lower is better)
Translates to: MPQGEGSLQLNFVTI*TCSEASWPELRGGC
Trigger: GCACCCTCCCCTGAGTTCTGGCCAGGAGGCTTCTGAACAAGTTCATATTGTTACAAAGTTCAGCTGGAGACTTCCTTCTCCCTGTGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493838.1
CDS-3UTR CAA 90 bp TTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTACGATGGAGATAACATaGCGGGGACCTGATGGGACG +
Preference number: 5 (lower is better)
Translates to: FPRHLKHASVTEKWRLPATMEIT*RGPDGT
Trigger: CGTCCCATCAGGTCCCCGCAATGTTATCTCCATCGT...AGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CAA 90 bp CCCTTTCTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTATGATGGACGTCTCATaGACGATGGAGATAACATTG +
Preference number: 5 (lower is better)
Translates to: PFLPVVGQLQPTENGSWVMMDVS*TMEITL
Trigger: CAATGTTATCTCCATCGTCAATGAGACGTCCATCAT...AACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAGAAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp CACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAGCAGCCCATCAATCCTaGCTGTGTTGGTCTGACTCC +
Preference number: 5 (lower is better)
Translates to: HGISNMLLSLRNGDCLLAAAHQS*LCWSDS
Trigger: GGAGTCAGACCAACACAGCAAGGATTGATGGGCTGC...TGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CAA 90 bp TTCTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTAGTTTCAAACGCCCCTaGTACACTTCTCCAAACTCC +
Preference number: 5 (lower is better)
Translates to: FFLWLGNCSPLRMGAGFTSFKRP*YTSPNS
Trigger: GGAGTTTGGAGAAGTGTACAAGGGGCGTTTGAAACT...AGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp CTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTGAACTGCCCGTCATTTaGCCTGAGGAAAGAATCCAA +
Preference number: 5 (lower is better)
Translates to: LWLGNCSPLRMGAGFTLVELPVI*PEERIQ
Trigger: TTGGATTCTTTCCTCAGGCAAAATGACGGGCAGTTC...AACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp CCCTTTCTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTGGCATTGATGACATCTaGGTTGGACATATCCCAATA +
Preference number: 5 (lower is better)
Translates to: PFLPVVGQLQPTENGSWVGIDDI*VGHIPI
Trigger: TATTGGGATATGTCCAACCAAGATGTCATCAATGCC...AACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAGAAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp CCAATAGGCCGATTGGGCCAACCAGAAAGCCAAACCAACACCATATTCCAGCCCAGAGTTCTCATGCCATaGCCGTTGGTGACTGACTTA +
Preference number: 5 (lower is better)
Translates to: PIGRLGQPESQTNTIFQPRVLMP*PLVTDL
Trigger: TAAGTCAGTCACCAACGGCAATGGCATGAGAACTCT...GGGCTGGAATATGGTGTTGGTTTGGCTTTCTGGTTGGCCCAATCGGCCTATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR CAA 90 bp TTCTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTAGAGTTCTCATGCCATaGCCGTTGGTGACTGACTTA +
Preference number: 5 (lower is better)
Translates to: FFLWLGNCSPLRMGAGFTRVLMP*PLVTDL
Trigger: TAAGTCAGTCACCAACGGCAATGGCATGAGAACTCT...AGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp TTCTTCCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTGGAGCTGGGTTTTGTTaGAAGAAACTTCCCTACAGG +
Preference number: 5 (lower is better)
Translates to: FFLWLGNCSPLRMGAGFTGAGFC*KKLPYR
Trigger: CCTGTAGGGAAGTTTCTTCAAACAAAACCCAGCTCC...AGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp GAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGATGCATATTGTTTTGTCTTCCCTGCAGGGCAAGCCTaGCATGCCACGCTGTTCTCA +
Preference number: 5 (lower is better)
Translates to: ENGSWVYSCSPDAYCFVFPAGQA*HATLFS
Trigger: TGAGAACAGCGTGGCATGCAAGGCTTGCCCTGCAGG...GAAGACAAAACAATATGCATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp GGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGCTTTGCTGGAGACTCCATaGATGGCCTGGATGTCAAAG +
Preference number: 5 (lower is better)
Translates to: GQQSPLATDRTTSGDSGALLETP*MAWMSK
Trigger: CTTTGACATCCAGGCCATCAATGGAGTCTCCAGCAA...AGCTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp GAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGATGCATATTGTTTTGTCTTCGGTGGAGGGGGCGGCTaGGTTTGTGGTGATGTTGAC +
Preference number: 5 (lower is better)
Translates to: ENGSWVYSCSPDAYCFVFGGGGG*VCGDVD
Trigger: GTCAACATCACCACAAACCAAGCCGCCCCCTCCACC...GAAGACAAAACAATATGCATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp AAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTCATAGTGGCACTGACTaGGTGCATGATGGGAACGGT +
Preference number: 5 (lower is better)
Translates to: KHASVTEKWRLPASNRSGHSGTD*VHDGNG
Trigger: ACCGTTCCCATCATGCACCAAGTCAGTGCCACTATG...ACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CAA 90 bp TTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTCATAGTGGCACTGACTaGGTGCATGATGGGAACGGT +
Preference number: 5 (lower is better)
Translates to: FPRHLKHASVTEKWRLPAHSGTD*VHDGNG
Trigger: ACCGTTCCCATCATGCACCAAGTCAGTGCCACTATG...AGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CAA 90 bp CTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGATGCATATTCCTGCTCGATGGCATaGATGACATCTTGGTTGGAC +
Preference number: 5 (lower is better)
Translates to: LQPTENGSWVYSCSPDAYSCSMA*MTSWLD
Trigger: GTCCAACCAAGATGTCATCAATGCCATCGAGCAGGA...ATATGCATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp GTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGACTGAGAAATGGAGATaGCCTGCTAGCAACAGGTCC +
Preference number: 5 (lower is better)
Translates to: VVSKVLWQLTEQHLETQETEKWR*PASNRS
Trigger: GGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGT...CTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp GGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGATGGAAACACAGACACATTaGAAACATTCCTCGGATGCC +
Preference number: 5 (lower is better)
Translates to: GNCSPLRMGAGFTLVLLMETQTH*KHSSDA
Trigger: GGCATCCGAGGAATGTTTCAAATGTGTCTGTGTTTC...CATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR CAA 90 bp GTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCAGAAGGCTGACTTCTaGGTGGCAATGACAGAGTCA +
Preference number: 5 (lower is better)
Translates to: VSHGISNMLLSLRNGDCLQKADF*VAMTES
Trigger: TGACTCTGTCATTGCCACCAAGAAGTCAGCCTTCTG...CAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR CAA 90 bp TTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCAGAAGGCTGACTTCTaGGTGGCAATGACAGAGTCA +
Preference number: 5 (lower is better)
Translates to: LDPHAVVSKVLWQLTEQHQKADF*VAMTES
Trigger: TGACTCTGTCATTGCCACCAAGAAGTCAGCCTTCTG...ATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp ATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTGATTTGCTGGAGACTCCATaGATGGCCTGGATGTCAAAG +
Preference number: 5 (lower is better)
Translates to: MLLSLRNGDCLLATGPVDLLETP*MAWMSK
Trigger: CTTTGACATCCAGGCCATCAATGGAGTCTCCAGCAA...ATCAACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CAA 90 bp CACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCATTGCTGGAGACTCCATaGATGGCCTGGATGTCAAAG +
Preference number: 5 (lower is better)
Translates to: HGISNMLLSLRNGDCLLALLETP*MAWMSK
Trigger: CTTTGACATCCAGGCCATCAATGGAGTCTCCAGCAA...TGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CAA 90 bp TTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTGGCCATGGAGGAGTaGAACTCATTGTGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: LDPHAVVSKVLWQLTEQHLAMEE*NSLCSF
Trigger: GAAGGAACACAATGAGTTCAACTCCTCCATGGCCAG...ATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp CTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGATGCATATGAACTGCCCGTCATTTaGCCTGAGGAAAGAATCCAA +
Preference number: 5 (lower is better)
Translates to: LQPTENGSWVYSCSPDAYELPVI*PEERIQ
Trigger: TTGGATTCTTTCCTCAGGCAAAATGACGGGCAGTTC...ATATGCATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp TTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTTCCTGCTCGATGGCATaGATGACATCTTGGTTGGAC +
Preference number: 5 (lower is better)
Translates to: FPRHLKHASVTEKWRLPASCSMA*MTSWLD
Trigger: GTCCAACCAAGATGTCATCAATGCCATCGAGCAGGA...AGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CAA 90 bp ATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTGATCTCATGCCATTGCCGTaGGTGACTGACTTATCTGGA +
Preference number: 5 (lower is better)
Translates to: MLLSLRNGDCLLATGPVDLMPLP*VTDLSG
Trigger: TCCAGATAAGTCAGTCACCAACGGCAATGGCATGAG...ATCAACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CAA 90 bp CACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCACTCATGCCATTGCCGTaGGTGACTGACTTATCTGGA +
Preference number: 5 (lower is better)
Translates to: HGISNMLLSLRNGDCLLALMPLP*VTDLSG
Trigger: TCCAGATAAGTCAGTCACCAACGGCAATGGCATGAG...TGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CAA 90 bp CTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGATGCATATGGAGCTGGGTTTTGTTaGAAGAAACTTCCCTACAGG +
Preference number: 5 (lower is better)
Translates to: LQPTENGSWVYSCSPDAYGAGFC*KKLPYR
Trigger: CCTGTAGGGAAGTTTCTTCAAACAAAACCCAGCTCC...ATATGCATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp CCTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTAAGACATTAATTGAATaGGTTGGATCCCCATGCAGT +
Preference number: 5 (lower is better)
Translates to: PVVGQLQPTENGSWVYSCKTLIE*VGSPCS
Trigger: ACTGCATGGGGATCCAACCAATTCAATTAATGTCTT...ACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp GGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGATGAGCAAGAATTCTCCCTaGTCACTTCTTGAATTGCAG +
Preference number: 5 (lower is better)
Translates to: GNCSPLRMGAGFTLVLLMSKNSP*SLLELQ
Trigger: CTGCAATTCAAGAAGTGACAAGGGAGAATTCTTGCT...CATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR CAA 90 bp CTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTAAACACTGCAAAATTTaGCACAATGCTGGGACACTT +
Preference number: 5 (lower is better)
Translates to: LWLGNCSPLRMGAGFTLVKHCKI*HNAGTL
Trigger: AAGTGTCCCAGCATTGTGCAAAATTTTGCAGTGTTT...AACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp CAGTATCATTCCAGGATGGCCCACACTGCATCCAATTCAAACCACTCACCTGTTAGTTTCAAACGCCCCTaGTACACTTCTCCAAACTCC +
Preference number: 5 (lower is better)
Translates to: QYHSRMAHTASNSNHSPVSFKRP*YTSPNS
Trigger: GGAGTTTGGAGAAGTGTACAAGGGGCGTTTGAAACT...AACAGGTGAGTGGTTTGAATTGGATGCAGTGTGGGCCATCCTGGAATGATACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR CAA 90 bp GTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGAGTTTCAAACGCCCCTaGTACACTTCTCCAAACTCC +
Preference number: 5 (lower is better)
Translates to: VSHGISNMLLSLRNGDCLSFKRP*YTSPNS
Trigger: GGAGTTTGGAGAAGTGTACAAGGGGCGTTTGAAACT...CAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CAA 90 bp AAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTGAACTGCCCGTCATTTaGCCTGAGGAAAGAATCCAA +
Preference number: 5 (lower is better)
Translates to: KHASVTEKWRLPASNRSGELPVI*PEERIQ
Trigger: TTGGATTCTTTCCTCAGGCAAAATGACGGGCAGTTC...ACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CAA 90 bp TTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCACACCAGGTTACTGTaGACCAGAATGTTCCTAGCA +
Preference number: 5 (lower is better)
Translates to: LDPHAVVSKVLWQLTEQHHTRLL*TRMFLA
Trigger: TGCTAGGAACATTCTGGTCAACAGTAACCTGGTGTG...ATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp AAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTCACACCAGGTTACTGTaGACCAGAATGTTCCTAGCA +
Preference number: 5 (lower is better)
Translates to: KHASVTEKWRLPASNRSGHTRLL*TRMFLA
Trigger: TGCTAGGAACATTCTGGTCAACAGTAACCTGGTGTG...ACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CAA 90 bp CACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAATCTTATCTAGGGTGTaGACAATCTCCGCAAACCGG +
Preference number: 5 (lower is better)
Translates to: HGISNMLLSLRNGDCLLAILSRV*TISANR
Trigger: CCGGTTTGCGGAGATTGTCAACACCCTAGATAAGAT...TGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CAA 90 bp TCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTGATTCTTCACTGAGAGTTCTCATGCCATaGCCGTTGGTGACTGACTTA +
Preference number: 5 (lower is better)
Translates to: SLRNGDCLLATGPVDSSLRVLMP*PLVTDL
Trigger: TAAGTCAGTCACCAACGGCAATGGCATGAGAACTCT...CAGTGAAGAATCAACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CAA 90 bp ATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGACCTTTCTTCCTGTGGTaGGGCAACTGCAGCCCACTG +
Preference number: 5 (lower is better)
Translates to: IYLVSHGISNMLLSLRNGPFFLW*GNCSPL
Trigger: CAGTGGGCTGCAGTTGCCCAACCACAGGAAGAAAGG...TCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR CAA 90 bp CTGTGGTTGGGCAACTGCAGCCCACTGAGAATGGGAGCTGGGTTTACTCTTGTTGTTCTTCTTTCTTGTTaGCATCTGTTACGAACAAGC +
Preference number: 5 (lower is better)
Translates to: LWLGNCSPLRMGAGFTLVVLLSC*HLLRTS
Trigger: GCTTGTTCGTAACAGATGCAAACAAGAAAGAAGAAC...AACAAGAGTAAACCCAGCTCCCATTCTCAGTGGGCTGCAGTTGCCCAACCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS TCA 90 bp CTCTCCTTCCCCAAGAAACAAGAGTTCTCATGCCATTGCCGTTGGTaGCTGACTTATCTGGACCCTCATAGAATGAATGCTGTTCAGGAT +
Preference number: 5 (lower is better)
Translates to: LSFPKKQEFSCHCRW*LTYLDPHRMNAVQD
Trigger: ATCCTGAACAGCATTCATTCTATGAGGGTCCAGATAAGTCAGTCACCAACGGCAATGGCATGAGAACTCTTGTTTCTTGGGGAAGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398015.8
ENST00000493838.1
ENST00000647596.1
CDS-3UTR CAA 90 bp ATTATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATATGACAGGCCGACTCTaGGTGACCACACCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: IIYLVSHGISNMLLSLRNMTGRL*VTTPSR
Trigger: CCTGGAGGGTGTGGTCACCAAGAGTCGGCCTGTCAT...ATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CAA 90 bp GGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTGGCATTGATGACATCTaGGTTGGACATATCCCAATA +
Preference number: 5 (lower is better)
Translates to: GSPCSGQQSPLATDRTTSGIDDI*VGHIPI
Trigger: TATTGGGATATGTCCAACCAAGATGTCATCAATGCC...AGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp TTAATTGAATTGGTTGGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTCTCATGCCATTGCCGTaGGTGACTGACTTATCTGGA +
Preference number: 5 (lower is better)
Translates to: LIELVGSPCSGQQSPLATLMPLP*VTDLSG
Trigger: TCCAGATAAGTCAGTCACCAACGGCAATGGCATGAG...AGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCCAACCAATTCAATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp GGATCCCCATGCAGTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTCCCAGTTCTTCTTTCTaGTTTGCATCTGTTACGAAC +
Preference number: 5 (lower is better)
Translates to: GSPCSGQQSPLATDRTTSPSSSF*FASVTN
Trigger: GTTCGTAACAGATGCAAACAAGAAAGAAGAACTGGG...AGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCACTGCATGGGGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR CAA 90 bp AACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTATGATGGACGTCTCATaGACGATGGAGATAACATTG +
Preference number: 5 (lower is better)
Translates to: NMLLSLRNGDCLLATGPVMMDVS*TMEITL
Trigger: CAATGTTATCTCCATCGTCAATGAGACGTCCATCAT...AACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CAA 90 bp TTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTGGCATTGATGACATCTaGGTTGGACATATCCCAATA +
Preference number: 5 (lower is better)
Translates to: FPRHLKHASVTEKWRLPAGIDDI*VGHIPI
Trigger: TATTGGGATATGTCCAACCAAGATGTCATCAATGCC...AGCAGGCAATCTCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CAA 90 bp GTGGTCAGCAAAGTCCTTTGGCAACTGACAGAACAACATCTGGAGACTCAGGAGTACATATGTGTGCTTTaGCACACGGAAACAGGTTTT +
Preference number: 5 (lower is better)
Translates to: VVSKVLWQLTEQHLETQEYICVL*HTETGF
Trigger: AAAACCTGTTTCCGTGTGCAAAAGCACACATATGTA...CTCCTGAGTCTCCAGATGTTGTTCTGTCAGTTGCCAAAGGACTTTGCTGACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR CAA 90 bp ATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGACTGGCCATGGAGGAGTaGAACTCATTGTGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: IYLVSHGISNMLLSLRNGLAMEE*NSLCSF
Trigger: GAAGGAACACAATGAGTTCAACTCCTCCATGGCCAG...TCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CAA 90 bp ATTATTATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAGCAGCCCATCAATCCTaGCTGTGTTGGTCTGACTCC +
Preference number: 5 (lower is better)
Translates to: IIIYLVSHGISNMLLSLRAAHQS*LCWSDS
Trigger: GGAGTCAGACCAACACAGCAAGGATTGATGGGCTGC...TCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATAATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CAA 90 bp GAGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGATGCATATTGTTTTGTCTTCCACACCAGGTTACTGTaGACCAGAATGTTCCTAGCA +
Preference number: 5 (lower is better)
Translates to: ENGSWVYSCSPDAYCFVFHTRLL*TRMFLA
Trigger: TGCTAGGAACATTCTGGTCAACAGTAACCTGGTGTG...GAAGACAAAACAATATGCATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp ATGCTTCTGTCACTGAGAAATGGAGATTGCCTGCTAGCAACAGGTCCGGTTGATAAGACATTAATTGAATaGGTTGGATCCCCATGCAGT +
Preference number: 5 (lower is better)
Translates to: MLLSLRNGDCLLATGPVDKTLIE*VGSPCS
Trigger: ACTGCATGGGGATCCAACCAATTCAATTAATGTCTT...ATCAACCGGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGTGACAGAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR CAA 90 bp ATTATTATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAGAGCCAATAGGCCGATaGGGCCAACCAGAAAGCCAA +
Preference number: 5 (lower is better)
Translates to: IIIYLVSHGISNMLLSLREPIGR*GQPESQ
Trigger: TTGGCTTTCTGGTTGGCCCAATCGGCCTATTGGCTC...TCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATAATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS-3UTR CAA 90 bp ATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAATCTTATCTAGGGTGTaGACAATCTCCGCAAACCGG +
Preference number: 5 (lower is better)
Translates to: IYLVSHGISNMLLSLRNGILSRV*TISANR
Trigger: CCGGTTTGCGGAGATTGTCAACACCCTAGATAAGAT...TCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CAA 90 bp ATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGATGTAACAATATGAACTaGTTCAGAAGCCTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: IYLVSHGISNMLLSLRNGCNNMN*FRSLLA
Trigger: GGCCAGGAGGCTTCTGAACAAGTTCATATTGTTACA...TCCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493838.1
CDS-3UTR CAA 90 bp AGAATGGGAGCTGGGTTTACTCTTGTTCTCCTGATGCATATTGTTTTGTCTTCAATGATGGACGTCTCATaGACGATGGAGATAACATTG +
Preference number: 5 (lower is better)
Translates to: RMGAGFTLVLLMHIVLSSMMDVS*TMEITL
Trigger: CAATGTTATCTCCATCGTCAATGAGACGTCCATCAT...TGAAGACAAAACAATATGCATCAGGAGAACAAGAGTAAACCCAGCTCCCATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000647596.1
CDS-3UTR CAA 90 bp TTTATTATTATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGACTGAGAAATGGAGATaGCCTGCTAGCAACAGGTCC +
Preference number: 5 (lower is better)
Translates to: FIIIYLVSHGISNMLLSLTEKWR*PASNRS
Trigger: GGACCTGTTGCTAGCAGGCAATCTCCATTTCTCAGT...CAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATAATAATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000493838.1
CDS-3UTR CAA 90 bp TATATATTTGGTTTCCCACGGCATCTCAAACATGCTTCTGTCACTGAGAAATGGAAACACTGCAAAATTTaGCACAATGCTGGGACACTT +
Preference number: 5 (lower is better)
Translates to: YIFGFPRHLKHASVTEKWKHCKI*HNAGTL
Trigger: AAGTGTCCCAGCATTGTGCAAAATTTTGCAGTGTTT...CCATTTCTCAGTGACAGAAGCATGTTTGAGATGCCGTGGGAAACCAAATATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS CCA 72 bp CGCTCTCGCCCGGACCGGACTTCCCGGAGCGCTGCGTaGGCGTGGGCAGGAGTGTGTGCGCGTGGGGCGGTG +
Preference number: 6 (lower is better)
Translates to: RSRPDRTSRSAA*AWAGVCARGAV
Trigger: CACCGCCCCACGCGCACACACTCCTGCCCACGCCCACGCAGCGCTCCGGGAAGTCCGGTCCGGGCGAGAGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398015.8
ENST00000482618.5
ENST00000647596.1
CDS GCA 72 bp GCAGCGCCGGGAGAGCGCCGCGTCCCAGGGCGCCGCTaGGCTCTCCGCGGGTGGCTTCTCGGTATCCTTTCG +
Preference number: 6 (lower is better)
Translates to: AAPGERRVPGRR*ALRGWLLGILS
Trigger: CGAAAGGATACCGAGAAGCCACCCGCGGAGAGCGCAGCGGCGCCCTGGGACGCGGCGCTCTCCCGGCGCTGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398015.8
ENST00000482618.5
ENST00000647596.1
CDS CCA 72 bp CGCCGCGTCCCAGGGCGCCGCTGCGCTCTCCGCGGGTaGCTTCTCGGTATCCTTTCGCGCTCTCGCCCGGAC +
Preference number: 6 (lower is better)
Translates to: RRVPGRRCALRG*LLGILSRSRPD
Trigger: GTCCGGGCGAGAGCGCGAAAGGATACCGAGAAGCCACCCGCGGAGAGCGCAGCGGCGCCCTGGGACGCGGCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398015.8
ENST00000482618.5
ENST00000647596.1
CDS CAA 72 bp CCACGGCAGAGCTTCTCCGGCCCCCGCGCGCAGTGCTaGCACGCCAAGCAGAGTCCACTAGCCCGTGGACTG +
Preference number: 6 (lower is better)
Translates to: PRQSFSGPRAQC*HAKQSPLARGL
Trigger: CAGTCCACGGGCTAGTGGACTCTGCTTGGCGTGCAAGCACTGCGCGCGGGGGCCGGAGAAGCTCTGCCGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497173.5
CDS CAA 90 bp CGAGCCTGGGAGAGCGCGCGAGAGCGAGTGCGTCCTGGTGTCACATaGCTAGCTACAGCGGAGCCTACGGGAGGACGGAGCCGGCCAGAC +
Preference number: 6 (lower is better)
Translates to: RAWESARERVRPGVT*LATAEPTGGRSRPD
Trigger: GTCTGGCCGGCTCCGTCCTCCCGTAGGCTCCGCTGTAGCTAGCAATGTGACACCAGGACGCACTCGCTCTCGCGCGCTCTCCCAGGCTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398015.8
CDS CAA 90 bp TGCGGGATACCACGGCAGAGCTTCTCCGGCCCCCGCGCGCAGTGCTaGCACGCCAAGCAGAGTCCACTAGCCCGTGGACTGCGAGCTGGA +
Preference number: 6 (lower is better)
Translates to: CGIPRQSFSGPRAQC*HAKQSPLARGLRAG
Trigger: TCCAGCTCGCAGTCCACGGGCTAGTGGACTCTGCTTGGCGTGCAAGCACTGCGCGCGGGGGCCGGAGAAGCTCTGCCGTGGTATCCCGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497173.5
CDS TCA 72 bp CCGGACCACCAGACTGGTCCCCAAGGGTACGGCCAATaGACTCCACCCCTCTCCTTCGGCGGCCACTTGCGG +
Preference number: 6 (lower is better)
Translates to: PDHQTGPQGYGQ*TPPLSFGGHLR
Trigger: CCGCAAGTGGCCGCCGAAGGAGAGGGGTGGAGTTCATTGGCCGTACCCTTGGGGACCAGTCTGGTGGTCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497173.5
CDS GCA 72 bp ATACCACGGCAGAGCTTCTCCGGCCCCCGCGCGCAGTaGTTGCACGCCAAGCAGAGTCCACTAGCCCGTGGA +
Preference number: 6 (lower is better)
Translates to: IPRQSFSGPRAQ*LHAKQSPLARG
Trigger: TCCACGGGCTAGTGGACTCTGCTTGGCGTGCAAGCACTGCGCGCGGGGGCCGGAGAAGCTCTGCCGTGGTAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497173.5
CDS GCA 72 bp CTGGGAGCCCACTGGGTTCCCCAAGCAGGAAATTCCTaGCTGGCACCACAGGGATCCCTCAGGAGGGCAGCC +
Preference number: 6 (lower is better)
Translates to: LGAHWVPQAGNS*LAPQGSLRRAA
Trigger: GGCTGCCCTCCTGAGGGATCCCTGTGGTGCCAGGCAGGAATTTCCTGCTTGGGGAACCCAGTGGGCTCCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493838.1
CDS CCA 72 bp ACGAGCCTGGGAGAGCGCGCGAGAGCGAGTGCGTCCTaGTGTCACATTGCTAGCTACAGCGGAGCCTACGGG +
Preference number: 6 (lower is better)
Translates to: TSLGERARASAS*CHIASYSGAYG
Trigger: CCCGTAGGCTCCGCTGTAGCTAGCAATGTGACACCAGGACGCACTCGCTCTCGCGCGCTCTCCCAGGCTCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000482618.5
CDS CCA 72 bp AAACCTGCAGTCCCGCAGGCGCCCGGACCACCAGACTaGTCCCCAAGGGTACGGCCAATGAACTCCACCCCT +
Preference number: 6 (lower is better)
Translates to: KPAVPQAPGPPD*SPRVRPMNSTP
Trigger: AGGGGTGGAGTTCATTGGCCGTACCCTTGGGGACCAGTCTGGTGGTCCGGGCGCCTGCGGGACTGCAGGTTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497173.5
CDS CAA 72 bp GAGAGCGCGCGAGAGCGAGTGCGTCCTGGTGTCACATaGCTAGCTACAGCGGAGCCTACGGGAGGACGGAGC +
Preference number: 6 (lower is better)
Translates to: ESARERVRPGVT*LATAEPTGGRS
Trigger: GCTCCGTCCTCCCGTAGGCTCCGCTGTAGCTAGCAATGTGACACCAGGACGCACTCGCTCTCGCGCGCTCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398015.8
ENST00000482618.5
CDS TCA 72 bp CTCAAGAGGCGAAAAGGGTTTCCACCTCTCCCCGACTaGCCCTGGAAACCTGCAGTCCCGCAGGCGCCCGGA +
Preference number: 6 (lower is better)
Translates to: LKRRKGFPPLPD*PWKPAVPQAPG
Trigger: TCCGGGCGCCTGCGGGACTGCAGGTTTCCAGGGTCAGTCGGGGAGAGGTGGAAACCCTTTTCGCCTCTTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497173.5
CDS CCA 72 bp GTAGAGGAAGCTGCGAGAAAGGCTCTGGGAGCCCACTaGGTTCCCCAAGCAGGAAATTCCTGCCTGGCACCA +
Preference number: 6 (lower is better)
Translates to: VEEAARKALGAH*VPQAGNSCLAP
Trigger: TGGTGCCAGGCAGGAATTTCCTGCTTGGGGAACCCAGTGGGCTCCCAGAGCCTTTCTCGCAGCTTCCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493838.1
CDS TCA 72 bp AGCAGCTCCGGCGGTCTGCCCGGCACTTTTTGCAGATaGTGTTGTAGGTCACATCATCCCGCCCACCTGTCT +
Preference number: 6 (lower is better)
Translates to: SSSGGLPGTFCR*CCRSHHPAHLS
Trigger: AGACAGGTGGGCGGGATGATGTGACCTACAACATCATCTGCAAAAAGTGCCGGGCAGACCGCCGGAGCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398015.8
ENST00000488992.1
ENST00000493838.1
ENST00000647596.1
CDS GCA 72 bp GTAGCCTGGGGCAAGTTCTTAGCCCTCCTTGCCCACTaGCTGGAAACTGACTCCGTGCTGTTAGAGGGGGAT +
Preference number: 6 (lower is better)
Translates to: VAWGKFLALLAH*LETDSVLLEGD
Trigger: ATCCCCCTCTAACAGCACGGAGTCAGTTTCCAGGCAGTGGGCAAGGAGGGCTAAGAACTTGCCCCAGGCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493838.1
CDS CCA 72 bp CATGACAAGGTGATGCTCCTCATAGTGGCACTGACTTaGTGCATGATGGGAACGGTGGAGGGGGCGGCTTGG +
Preference number: 6 (lower is better)
Translates to: HDKVMLLIVALT*CMMGTVEGAAW
Trigger: CCAAGCCGCCCCCTCCACCGTTCCCATCATGCACCAAGTCAGTGCCACTATGAGGAGCATCACCTTGTCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398015.8
ENST00000488992.1
ENST00000493838.1
ENST00000647596.1
CDS CCA 72 bp AGCCTCCTGGCCAGAACTCAGGGGAGGGTGCGAATCTaGCATGCAGACTCCACAGGCAGGGGAAGAACTAAA +
Preference number: 6 (lower is better)
Translates to: SLLARTQGRVRI*HADSTGRGRTK
Trigger: TTTAGTTCTTCCCCTGCCTGTGGAGTCTGCATGCCAGATTCGCACCCTCCCCTGAGTTCTGGCCAGGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493838.1
CDS CAA 90 bp GGCCTCTGTCACCAGAATCCTCCCCACCTCAGCAGCCTATCTCCTTaGTGCCTTCAGCTAGCAACCATCCATGGAACAGTGGCTGGCCTT +
Preference number: 6 (lower is better)
Translates to: GLCHQNPPHLSSLSP*CLQLATIHGTVAGL
Trigger: AAGGCCAGCCACTGTTCCATGGATGGTTGCTAGCTGAAGGCACAAAGGAGATAGGCTGCTGAGGTGGGGAGGATTCTGGTGACAGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488992.1
CDS TCA 72 bp CATCGTCAGTCAGAGTCTGGAAGCACATCTTGCCACTaGACTTGCCGTAGCCAGCAACAGTGCGGGCACGCA +
Preference number: 6 (lower is better)
Translates to: HRQSESGSTSCH*TCRSQQQCGHA
Trigger: TGCGTGCCCGCACTGTTGCTGGCTACGGCAAGTTCAGTGGCAAGATGTGCTTCCAGACTCTGACTGACGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398015.8
ENST00000493838.1
ENST00000647596.1
CDS CCA 72 bp GTTGTAGGTCACATCATCCCGCCCACCTGTCTCCCTTaGAGGGTGCCACTCCAGAATGATGGACGTCTCATT +
Preference number: 6 (lower is better)
Translates to: VVGHIIPPTCLP*RVPLQNDGRLI
Trigger: AATGAGACGTCCATCATTCTGGAGTGGCACCCTCCAAGGGAGACAGGTGGGCGGGATGATGTGACCTACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398015.8
ENST00000493838.1
ENST00000647596.1
CDS CAA 72 bp TCCATGGAACAGTGGCTGGCCTTGGGTCTTGCAAGCTaGCAGGTAGAGCTGGCTCACCTTCTCATAGTACCG +
Preference number: 6 (lower is better)
Translates to: SMEQWLALGLAS*QVELAHLLIVP
Trigger: CGGTACTATGAGAAGGTGAGCCAGCTCTACCTGCAAGCTTGCAAGACCCAAGGCCAGCCACTGTTCCATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488992.1
CDS CCA 72 bp CCTATCTCCTTTGTGCCTTCAGCTAGCAACCATCCATaGAACAGTGGCTGGCCTTGGGTCTTGCAAGCTTGC +
Preference number: 6 (lower is better)
Translates to: PISFVPSASNHP*NSGWPWVLQAC
Trigger: GCAAGCTTGCAAGACCCAAGGCCAGCCACTGTTCCATGGATGGTTGCTAGCTGAAGGCACAAAGGAGATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488992.1
CDS CAA 72 bp CTTGGAGGGTGCCACTCCAGAATGATGGACGTCTCATaGACGATGGAGATAACATTGCGGGGACCTGATGGG +
Preference number: 6 (lower is better)
Translates to: LGGCHSRMMDVS*TMEITLRGPDG
Trigger: CCCATCAGGTCCCCGCAATGTTATCTCCATCGTCAATGAGACGTCCATCATTCTGGAGTGGCACCCTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398015.8
ENST00000488154.5
ENST00000493838.1
ENST00000647596.1
CDS CAA 72 bp CACCAGAATCCTCCCCACCTCAGCAGCCTATCTCCTTaGTGCCTTCAGCTAGCAACCATCCATGGAACAGTG +
Preference number: 6 (lower is better)
Translates to: HQNPPHLSSLSP*CLQLATIHGTV
Trigger: CACTGTTCCATGGATGGTTGCTAGCTGAAGGCACAAAGGAGATAGGCTGCTGAGGTGGGGAGGATTCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488992.1
CDS GCA 72 bp CCCCTGAGCATACCCACAAGCTGGATCACGGTGAACTaGCCGTCATTTTGCCTGAGGAAAGAATCCAATGCA +
Preference number: 6 (lower is better)
Translates to: PLSIPTSWITVN*PSFCLRKESNA
Trigger: TGCATTGGATTCTTTCCTCAGGCAAAATGACGGGCAGTTCACCGTGATCCAGCTTGTGGGTATGCTCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398015.8
ENST00000493838.1
ENST00000647596.1
CDS TCA 72 bp GTCTACTTTGAGGTAGGGGGCCTCAGACCAGAAGGCTaGCTTCTTGGTGGCAATGACAGAGTCAGTCTCATA +
Preference number: 6 (lower is better)
Translates to: VYFEVGGLRPEG*LLGGNDRVSLI
Trigger: TATGAGACTGACTCTGTCATTGCCACCAAGAAGTCAGCCTTCTGGTCTGAGGCCCCCTACCTCAAAGTAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398015.8
ENST00000474732.1
ENST00000482618.5
ENST00000488154.5
ENST00000647596.1
CDS CAA 72 bp AGAATGATGGACGTCTCATTGACGATGGAGATAACATaGCGGGGACCTGATGGGACGCTAGTGCATGCCACT +
Preference number: 6 (lower is better)
Translates to: RMMDVSLTMEIT*RGPDGTLVHAT
Trigger: AGTGGCATGCACTAGCGTCCCATCAGGTCCCCGCAATGTTATCTCCATCGTCAATGAGACGTCCATCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398015.8
ENST00000488154.5
ENST00000493838.1
ENST00000647596.1
CDS CAA 90 bp ACAGGGAGAAGGAAGTCTCCAGCTGAACTTTGTAACAATATGAACTaGTTCAGAAGCCTCCTGGCCAGAACTCAGGGGAGGGTGCGAATC +
Preference number: 6 (lower is better)
Translates to: TGRRKSPAELCNNMN*FRSLLARTQGRVRI
Trigger: GATTCGCACCCTCCCCTGAGTTCTGGCCAGGAGGCTTCTGAACAAGTTCATATTGTTACAAAGTTCAGCTGGAGACTTCCTTCTCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493838.1
CDS CAA 72 bp AGGAAGTCTCCAGCTGAACTTTGTAACAATATGAACTaGTTCAGAAGCCTCCTGGCCAGAACTCAGGGGAGG +
Preference number: 6 (lower is better)
Translates to: RKSPAELCNNMN*FRSLLARTQGR
Trigger: CCTCCCCTGAGTTCTGGCCAGGAGGCTTCTGAACAAGTTCATATTGTTACAAAGTTCAGCTGGAGACTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493838.1
CDS TCA 72 bp CCCAAGAAACAAGAGTTCTCATGCCATTGCCGTTGGTaGCTGACTTATCTGGACCCTCATAGAATGAATGCT +
Preference number: 6 (lower is better)
Translates to: PKKQEFSCHCRW*LTYLDPHRMNA
Trigger: AGCATTCATTCTATGAGGGTCCAGATAAGTCAGTCACCAACGGCAATGGCATGAGAACTCTTGTTTCTTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398015.8
ENST00000493838.1
ENST00000647596.1
CDS CAA 90 bp CTCCATCCTTGTGAAGCCTCCTTAGGCTATTTGTCCTGCTTTAATTaGAAGTTTCCAATGCATCTGAGAGCCAGATTGATTTTATTTGGC +
Preference number: 6 (lower is better)
Translates to: LHPCEASLGYLSCFN*KFPMHLRARLILFG
Trigger: GCCAAATAAAATCAATCTGGCTCTCAGATGCATTGGAAACTTCAAATTAAAGCAGGACAAATAGCCTAAGGAGGCTTCACAAGGATGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473867.5
CDS CAA 90 bp TTGTCCTGCTTTAATTTGAAGTTTCCAATGCATCTGAGAGCCAGATaGATTTTATTTGGCCGATACAGAGCATTTCCCTGCTTTCTTCTC +
Preference number: 6 (lower is better)
Translates to: LSCFNLKFPMHLRAR*ILFGRYRAFPCFLL
Trigger: GAGAAGAAAGCAGGGAAATGCTCTGTATCGGCCAAATAAAATCAATCTGGCTCTCAGATGCATTGGAAACTTCAAATTAAAGCAGGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473867.5
CDS CAA 72 bp TTTAATTTGAAGTTTCCAATGCATCTGAGAGCCAGATaGATTTTATTTGGCCGATACAGAGCATTTCCCTGC +
Preference number: 6 (lower is better)
Translates to: FNLKFPMHLRAR*ILFGRYRAFPC
Trigger: GCAGGGAAATGCTCTGTATCGGCCAAATAAAATCAATCTGGCTCTCAGATGCATTGGAAACTTCAAATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473867.5