RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPHA8 (Homo sapiens)

Ensembl gene IDs: ENSG00000070886

Ensembl transcript IDs: ENST00000166244.8, ENST00000374644.8

Found 370 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTTCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATaGGGACAAGAGCCTTGGCAGGAGGCCGGAGCCCCGACTCTGACA +
Preference number: 1 (lower is better)
Translates to: ASRALPPPAPLWDGV*GQEPWQEAGAPTLT
Trigger: TGTCAGAGTCGGGGCTCCGGCCTCCTGCCAAGGCTCTTGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR TCA 90 bp GGTGTCCTCACCAGGGTGGCCACCAAAGGCCCCTTCCCAGGCGCCTaGCCCCTGATAACTCCAGGTCCTGTGGCGAAGCCTTCAGCTCCT +
Preference number: 1 (lower is better)
Translates to: GVLTRVATKGPFPGA*PLITPGPVAKPSAP
Trigger: AGGAGCTGAAGGCTTCGCCACAGGACCTGGAGTTATCAGGGGTCAGGCGCCTGGGAAGGGGCCTTTGGTGGCCACCCTGGTGAGGACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR TCA 90 bp GCCTTAACGGATAAGCACACGCTCATAACATGCACACGTCCATGCTaGGACCCGAAGGGGTGGACACACTTGATCACACACTGTTCACAT +
Preference number: 1 (lower is better)
Translates to: ALTDKHTLITCTRPC*DPKGWTHLITHCSH
Trigger: ATGTGAACAGTGTGTGATCAAGTGTGTCCACCCCTTCGGGTCTCAGCATGGACGTGTGCATGTTATGAGCGTGTGCTTATCCGTTAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR CCA 90 bp ACAGCTCGGCTATATAGTAATATAATATATAGAGGTGTAGAGAGCTaGCCGCGGCACCTGGATGGGGCTGAGACTCCCCGAATTATTGCA +
Preference number: 1 (lower is better)
Translates to: TARLYSNIIYRGVES*PRHLDGAETPRIIA
Trigger: TGCAATAATTCGGGGAGTCTCAGCCCCATCCAGGTGCCGCGGCCAGCTCTCTACACCTCTATATATTATATTACTATATAGCCGAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR TCA 90 bp AAAGTTCTGGAACCTAGGCTTTCGACGGCCACACTAGCCTGCCTCTaGGCTTTTGGGATTTCTCTTACTTATAGAATGTGTTCCACTTTT +
Preference number: 1 (lower is better)
Translates to: KVLEPRLSTATLACL*AFGISLTYRMCSTF
Trigger: AAAAGTGGAACACATTCTATAAGTAAGAGAAATCCCAAAAGCTCAGAGGCAGGCTAGTGTGGCCGTCGAAAGCCTAGGTTCCAGAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374644.8
3UTR-3UTR CCA 90 bp GGGGACAGGTGTCCTCACCAGGGTGGCCACCAAAGGCCCCTTCCCAGGCGCCTGGACCTGGGGTGGGCTTaGTGGCTGCCTGGGCCCTGC +
Preference number: 2 (lower is better)
Translates to: GDRCPHQGGHQRPLPRRLDLGWA*WLPGPC
Trigger: GCAGGGCCCAGGCAGCCACCAAGCCCACCCCAGGTC...CAGGCGCCTGGGAAGGGGCCTTTGGTGGCCACCCTGGTGAGGACACCTGTCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR GCA 90 bp CGCCCTTGTGGGATGGTGTATGGGGACAAGAGCCTTGGCAGGAGGCCGGAGCCCGCCCCTCACGTCCTCTaGCGCTGGCATGACCTGGGG +
Preference number: 2 (lower is better)
Translates to: RPCGMVYGDKSLGRRPEPAPHVL*RWHDLG
Trigger: CCCCAGGTCATGCCAGCGGCAGAGGACGTGAGGGGC...GGGCTCCGGCCTCCTGCCAAGGCTCTTGTCCCCATACACCATCCCACAAGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR GCA 90 bp GGCTTCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACACCCCGCCCCCATGGGTaGTGGACCTGGCGGTGTCAC +
Preference number: 2 (lower is better)
Translates to: GFQGTSTPSALVGWCMGTPRPHG*WTWRCH
Trigger: GTGACACCGCCAGGTCCAGCACCCATGGGGGCGGGG...TGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGAAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR TCA 90 bp GTGAGCCTCTCCCCCGCCCCCATGGGTGCTGGACCTGGCGGTGTCACACTGAGTCCCTTCCCAGGCGCCTaGCCCCTGATAACTCCAGGT +
Preference number: 2 (lower is better)
Translates to: VSLSPAPMGAGPGGVTLSPFPGA*PLITPG
Trigger: ACCTGGAGTTATCAGGGGTCAGGCGCCTGGGAAGGG...ACTCAGTGTGACACCGCCAGGTCCAGCACCCATGGGGGCGGGGGAGAGGCTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR GCA 90 bp GGCTTCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAGAGCCGGGTGGAGGCTaGAGGTGGCCTCCTCGGCTA +
Preference number: 2 (lower is better)
Translates to: GFQGTSTPSALVGWCMGTEPGGG*RWPPRL
Trigger: TAGCCGAGGAGGCCACCTGCAGCCTCCACCCGGCTC...TGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGAAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR TCA 90 bp CGCGGCACCTGGATGGGGCTGAGACTCCCCGAATTATTGCAGGAGGGAGAGGGGGCCATGATGCCTCCATaGAGGCGGCCAGCCGGACTG +
Preference number: 2 (lower is better)
Translates to: RGTWMGLRLPELLQEGEGAMMPP*RRPAGL
Trigger: CAGTCCGGCTGGCCGCCTTCATGGAGGCATCATGGC...CCCCTCTCCCTCCTGCAATAATTCGGGGAGTCTCAGCCCCATCCAGGTGCCGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR CCA 90 bp CCCCTTCCCAGGCGCCTGACCCCTGATAACTCCAGGTCCTGTGGCGAAGCCTTCTGGCATGACCTGGGGTaGGCTTGGTGGCTGCCTGGG +
Preference number: 2 (lower is better)
Translates to: PLPRRLTPDNSRSCGEAFWHDLG*AWWLPG
Trigger: CCCAGGCAGCCACCAAGCCCACCCCAGGTCATGCCA...GAAGGCTTCGCCACAGGACCTGGAGTTATCAGGGGTCAGGCGCCTGGGAAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR TCA 90 bp CGCCCTTGTGGGATGGTGTATGGGGACAAGAGCCTTGGCAGGAGGCCGGAGCCCTTGGCGAAGGGACTTTaGGTGAGGAGACCTGGGCCG +
Preference number: 2 (lower is better)
Translates to: RPCGMVYGDKSLGRRPEPLAKGL*VRRPGP
Trigger: CGGCCCAGGTCTCCTCACTCAAAGTCCCTTCGCCAA...GGGCTCCGGCCTCCTGCCAAGGCTCTTGTCCCCATACACCATCCCACAAGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR GCA 90 bp CAGCTGAGGACATCTCATGTGCTCTGCCATGATGCCTCCATGAAGGCGGCCAGCGGCCGCCCTGCCTGCTaGCAGCCCCTCACGTCCTCT +
Preference number: 2 (lower is better)
Translates to: QLRTSHVLCHDASMKAASGRPAC*QPLTSS
Trigger: AGAGGACGTGAGGGGCTGGCAGCAGGCAGGGCGGCC...GCTGGCCGCCTTCATGGAGGCATCATGGCAGAGCACATGAGATGTCCTCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR CCA 90 bp CCACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGTCTCCCCCGCCCCCATaGGTGCTGGACCTGGCGGTG +
Preference number: 2 (lower is better)
Translates to: PHFCKCQAHGASMTVRIQSPPPP*VLDLAV
Trigger: CACCGCCAGGTCCAGCACCCATGGGGGCGGGGGAGA...CTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR TCA 90 bp CCACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGCCTCTGCCGCTGGCATaGCCTGGGGTGGGCTTGGTG +
Preference number: 2 (lower is better)
Translates to: PHFCKCQAHGASMTVRIQPLPLA*PGVGLV
Trigger: CACCAAGCCCACCCCAGGTCATGCCAGCGGCAGAGG...CTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR TCA 90 bp GGCTTCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACATGCACACGTCCATGCTaGGACCCGAAGGGGTGGACA +
Preference number: 2 (lower is better)
Translates to: GFQGTSTPSALVGWCMGTCTRPC*DPKGWT
Trigger: TGTCCACCCCTTCGGGTCTCAGCATGGACGTGTGCA...TGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGAAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR TCA 90 bp CCACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGGGGAGGACCCAGACCTaGGATACAGCCGGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: PHFCKCQAHGASMTVRIQGRTQT*DTAGVG
Trigger: GCCCACCCCGGCTGTATCTCAGGTCTGGGTCCTCCC...CTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR CCA 90 bp CCACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGGCCGCTGGCATGACCTaGGGTGGGCTTGGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: PHFCKCQAHGASMTVRIQAAGMT*GGLGGC
Trigger: GCAGCCACCAAGCCCACCCCAGGTCATGCCAGCGGC...CTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR CCA 90 bp AGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAAGAGCCTGAGATACAGCCGGGGTaGGCTCACCCAGGCAGAGAC +
Preference number: 2 (lower is better)
Translates to: RALPPPAPLWDGVWGQEPEIQPG*AHPGRD
Trigger: GTCTCTGCCTGGGTGAGCCCACCCCGGCTGTATCTC...AGGCTCTTGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR CCA 90 bp CGCGGCACCTGGATGGGGCTGAGACTCCCCGAATTATTGCAGGAGGGAGAGGGGCCCCCAGCGCCCTTGTaGGATGGTGTATGGGGACAA +
Preference number: 2 (lower is better)
Translates to: RGTWMGLRLPELLQEGEGPPAPL*DGVWGQ
Trigger: TTGTCCCCATACACCATCCCACAAGGGCGCTGGGGG...CCCCTCTCCCTCCTGCAATAATTCGGGGAGTCTCAGCCCCATCCAGGTGCCGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR GCA 90 bp GCTTCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAACGAGGGTGGGCCTGGTaGTGGTGCAGTTCAGAAGTG +
Preference number: 2 (lower is better)
Translates to: ASRALPPPAPLWDGVWGQRGWAW*WCSSEV
Trigger: CACTTCTGAACTGCACCAGCACCAGGCCCACCCTCG...TTGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR CCA 90 bp CAGCTGAGGACATCTCATGTGCTCTGCCATGATGCCTCCATGAAGGCGGCCAGCCGCCCCCATGGGTGCTaGACCTGGCGGTGTCACACT +
Preference number: 2 (lower is better)
Translates to: QLRTSHVLCHDASMKAASRPHGC*TWRCHT
Trigger: AGTGTGACACCGCCAGGTCCAGCACCCATGGGGGCG...GCTGGCCGCCTTCATGGAGGCATCATGGCAGAGCACATGAGATGTCCTCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR CCA 90 bp GGCTTCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAAGACGAGGGTGGGCCTaGTGCTGGTGCAGTTCAGAA +
Preference number: 2 (lower is better)
Translates to: GFQGTSTPSALVGWCMGTRRGWA*CWCSSE
Trigger: TTCTGAACTGCACCAGCACCAGGCCCACCCTCGTCT...TGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR GCA 90 bp CCCCCACCACACACACACATGCACGCACACAGAGGCAGGCGAGTGATGTCCCTGAAAAGAGAAGGTGCCTaGCCTGGGGGACAGGTGTCC +
Preference number: 2 (lower is better)
Translates to: PPPHTHMHAHRGRRVMSLKREGA*PGGQVS
Trigger: GGACACCTGTCCCCCAGGGCAGGCACCTTCTCTTTT...CAGGGACATCACTCGCCTGCCTCTGTGTGCGTGCATGTGTGTGTGTGGTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR GCA 90 bp GCTTCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAAGACACTTGGTTGCAGTaGAACCTGGGACGGGGCATC +
Preference number: 2 (lower is better)
Translates to: ASRALPPPAPLWDGVWGQDTWLQ*NLGRGI
Trigger: GATGCCCCGTCCCAGGTTGCACTGCAACCAAGTGTC...TTGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR GCA 90 bp CCACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGACACGGTGGGGTTCCTaGTTCCCTGCCTGCCAACGG +
Preference number: 2 (lower is better)
Translates to: PHFCKCQAHGASMTVRIQTRWGS*FPACQR
Trigger: CCGTTGGCAGGCAGGGAAGCAGGAACCCCACCGTGT...CTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR CCA 90 bp ACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGAGCACGTCCTCTGCCGCTaGCATGACCTGGGGTGGGCT +
Preference number: 2 (lower is better)
Translates to: TLLQVPGPRCLHDCEDPEHVLCR*HDLGWA
Trigger: AGCCCACCCCAGGTCATGCCAGCGGCAGAGGACGTG...CTCTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR CCA 90 bp CAGCTGAGGACATCTCATGTGCTCTGCCATGATGCCTCCATGAAGGCGGCCAGCGGTGCAGTTCAGAAGTaGCCCCTGGCTCCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: QLRTSHVLCHDASMKAASGAVQK*PLAPAS
Trigger: GGAGGCTGGAGCCAGGGGCCACTTCTGAACTGCACC...GCTGGCCGCCTTCATGGAGGCATCATGGCAGAGCACATGAGATGTCCTCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR CCA 90 bp CCACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGGGGTGGGCCTGGTGCTaGTGCAGTTCAGAAGTGGCC +
Preference number: 2 (lower is better)
Translates to: PHFCKCQAHGASMTVRIQGWAWC*CSSEVA
Trigger: GGCCACTTCTGAACTGCACCAGCACCAGGCCCACCC...CTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR GCA 90 bp GGAGAGGGGGCTCAGTGCTGGTGTCCCCGCGGGATAGCTGTGCTGGCTATGGGGACATCTCATGTGCTCTaGCATGATGCCTCCATGAAG +
Preference number: 2 (lower is better)
Translates to: GEGAQCWCPRGIAVLAMGTSHVL*HDASMK
Trigger: CTTCATGGAGGCATCATGGCAGAGCACATGAGATGT...CCCCATAGCCAGCACAGCTATCCCGCGGGGACACCAGCACTGAGCCCCCTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR TCA 90 bp GGCTTCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAAGGGGTGGACACACTTaGTCACACACTGTTCACATG +
Preference number: 2 (lower is better)
Translates to: GFQGTSTPSALVGWCMGTRGGHT*SHTVHM
Trigger: CATGTGAACAGTGTGTGATCAAGTGTGTCCACCCCT...TGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR CCA 90 bp ACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGAGTTGGACTCTGTGACGTaGAGGCCCCAGGCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: TLLQVPGPRCLHDCEDPELDSVT*RPQALE
Trigger: TTCCAGAGCCTGGGGCCTCCACGTCACAGAGTCCAA...CTCTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR CCA 90 bp ACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGAGGAAGATAGGATCCTCTaGTCCCTGATCCTAGGCCTG +
Preference number: 2 (lower is better)
Translates to: TLLQVPGPRCLHDCEDPEEDRIL*SLILGL
Trigger: CAGGCCTAGGATCAGGGACCAGAGGATCCTATCTTC...CTCTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR TCA 90 bp CCACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGACACCTCCTCATTCATaGCACATCATCCACCATCAC +
Preference number: 2 (lower is better)
Translates to: PHFCKCQAHGASMTVRIQTPPHS*HIIHHH
Trigger: GTGATGGTGGATGATGTGTCATGAATGAGGAGGTGT...CTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR CCA 90 bp AGCCTCCTGAGAGGACCTCAGGCAGGTACTATTATTCCCATTGCACCAGGGAGGAGAGAGGGAAAGTTCTaGAACCTAGGCTTTCGACGG +
Preference number: 2 (lower is better)
Translates to: SLLRGPQAGTIIPIAPGRREGKF*NLGFRR
Trigger: CCGTCGAAAGCCTAGGTTCCAGAACTTTCCCTCTCT...CCTCCCTGGTGCAATGGGAATAATAGTACCTGCCTGAGGTCCTCTCAGGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
3UTR-3UTR TCA 90 bp CAATTTCATTCCTCTCATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTACACTAGCCTGCCTCTaGGCTTTTGGGATTTCTCTT +
Preference number: 2 (lower is better)
Translates to: QFHSSHLSLLRGPQAGTITLACL*AFGISL
Trigger: AAGAGAAATCCCAAAAGCTCAGAGGCAGGCTAGTGT...AATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATGAGAGGAATGAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374644.8
3UTR CCA 72 bp GCCCCTCACGTCCTCTGCCGCTGGCATGACCTGGGGTaGGCTTGGTGGCTGCCTGGGCCCTGCTGGCTGTAC +
Preference number: 3 (lower is better)
Translates to: APHVLCRWHDLG*AWWLPGPCWLY
Trigger: GTACAGCCAGCAGGGCCCAGGCAGCCACCAAGCCCACCCCAGGTCATGCCAGCGGCAGAGGACGTGAGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR GCA 72 bp TCACCCAGGCAGAGACGAGGGTGGGCCTGGTGCTGGTaGAGTTCAGAAGTGGCCCCTGGCTCCAGCCTCCAG +
Preference number: 3 (lower is better)
Translates to: SPRQRRGWAWCW*SSEVAPGSSLQ
Trigger: CTGGAGGCTGGAGCCAGGGGCCACTTCTGAACTGCACCAGCACCAGGCCCACCCTCGTCTCTGCCTGGGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR CCA 72 bp GGTGAGCCTCTCCCCCGCCCCCATGGGTGCTGGACCTaGCGGTGTCACACTGAGTTCCCTGCTCACACACCT +
Preference number: 3 (lower is better)
Translates to: GEPLPRPHGCWT*RCHTEFPAHTP
Trigger: AGGTGTGTGAGCAGGGAACTCAGTGTGACACCGCCAGGTCCAGCACCCATGGGGGCGGGGGAGAGGCTCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR TCA 72 bp ACCAGGGTGGCCACCAAAGGCCCCTTCCCAGGCGCCTaGCCCCTGATAACTCCAGGTCCTGTGGCGAAGCCT +
Preference number: 3 (lower is better)
Translates to: TRVATKGPFPGA*PLITPGPVAKP
Trigger: AGGCTTCGCCACAGGACCTGGAGTTATCAGGGGTCAGGCGCCTGGGAAGGGGCCTTTGGTGGCCACCCTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR CCA 72 bp TTCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATaGTGTATGGGGACAAGAGCCTTGGCAGGAGGCCGG +
Preference number: 3 (lower is better)
Translates to: FQGTSTPSALVG*CMGTRALAGGR
Trigger: CCGGCCTCCTGCCAAGGCTCTTGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR CCA 72 bp CCCGAATTATTGCAGGAGGGAGAGGGGGCTCAGTGCTaGTGTCCCCGCGGGATAGCTGTGCTGGCTATGGGG +
Preference number: 3 (lower is better)
Translates to: PELLQEGEGAQC*CPRGIAVLAMG
Trigger: CCCCATAGCCAGCACAGCTATCCCGCGGGGACACCAGCACTGAGCCCCCTCTCCCTCCTGCAATAATTCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR CAA 90 bp GCTTCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAATGTCAGGGCTGGGCATaGAAAGGTTGGCGAAGGGAC +
Preference number: 3 (lower is better)
Translates to: ASRALPPPAPLWDGVWGQCQGWA*KGWRRD
Trigger: GTCCCTTCGCCAACCTTTCAATGCCCAGCCCTGACA...TTGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR TCA 72 bp GGATGGAGACCACAGAGAGGCAGATCCCCAGGACCCTaGGAGGGACCACACACTAGAGTGAGGGGCCACACT +
Preference number: 3 (lower is better)
Translates to: GWRPQRGRSPGP*EGPHTRVRGHT
Trigger: AGTGTGGCCCCTCACTCTAGTGTGTGGTCCCTCTCAGGGTCCTGGGGATCTGCCTCTCTGTGGTCTCCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR CAA 90 bp ACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGAGAGACTCCCCGAATTATaGCAGGAGGGAGAGGGGGCT +
Preference number: 3 (lower is better)
Translates to: TLLQVPGPRCLHDCEDPERLPEL*QEGEGA
Trigger: AGCCCCCTCTCCCTCCTGCAATAATTCGGGGAGTCT...CTCTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR CAA 90 bp GTGCCTCCAGCCTTAACGGATAAGCACACGCTCATAACATGCACACGTCCATGCCGAGTGATGTCCCTGTaGGACTCTGTGACGTGGAGG +
Preference number: 3 (lower is better)
Translates to: VPPALTDKHTLITCTRPCRVMSL*DSVTWR
Trigger: CCTCCACGTCACAGAGTCCAACAGGGACATCACTCG...GCATGGACGTGTGCATGTTATGAGCGTGTGCTTATCCGTTAAGGCTGGAGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR-3UTR CAA 90 bp ACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGAGAAGGGGTGGACACACTaGATCACACACTGTTCACAT +
Preference number: 3 (lower is better)
Translates to: TLLQVPGPRCLHDCEDPEKGWTH*ITHCSH
Trigger: ATGTGAACAGTGTGTGATCAAGTGTGTCCACCCCTT...CTCTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR TCA 72 bp CACGTCCATGCTGAGACCCGAAGGGGTGGACACACTTaGTCACACACTGTTCACATGAGATCCCATGACCTT +
Preference number: 3 (lower is better)
Translates to: HVHAETRRGGHT*SHTVHMRSHDL
Trigger: AAGGTCATGGGATCTCATGTGAACAGTGTGTGATCAAGTGTGTCCACCCCTTCGGGTCTCAGCATGGACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR TCA 72 bp GATAAGCACACGCTCATAACATGCACACGTCCATGCTaGGACCCGAAGGGGTGGACACACTTGATCACACAC +
Preference number: 3 (lower is better)
Translates to: DKHTLITCTRPC*DPKGWTHLITH
Trigger: GTGTGTGATCAAGTGTGTCCACCCCTTCGGGTCTCAGCATGGACGTGTGCATGTTATGAGCGTGTGCTTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR CCA 72 bp CTATATAGTAATATAATATATAGAGGTGTAGAGAGCTaGCCGCGGCACCTGGATGGGGCTGAGACTCCCCGA +
Preference number: 3 (lower is better)
Translates to: LYSNIIYRGVES*PRHLDGAETPR
Trigger: TCGGGGAGTCTCAGCCCCATCCAGGTGCCGCGGCCAGCTCTCTACACCTCTATATATTATATTACTATATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR TCA 72 bp GAACCTAGGCTTTCGACGGCCACACTAGCCTGCCTCTaGGCTTTTGGGATTTCTCTTACTTATAGAATGTGT +
Preference number: 3 (lower is better)
Translates to: EPRLSTATLACL*AFGISLTYRMC
Trigger: ACACATTCTATAAGTAAGAGAAATCCCAAAAGCTCAGAGGCAGGCTAGTGTGGCCGTCGAAAGCCTAGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR GCA 90 bp CAGGTGTCCTCACCAGGGTGGCCACCAAAGGCCCCTTCCCAGGCGCCTGACCCCGGCCGCCCTGCCTGCTaGCAGCCCCTCACGTCCTCT +
Preference number: 4 (lower is better)
Translates to: QVSSPGWPPKAPSQAPDPGRPAC*QPLTSS
Trigger: AGAGGACGTGAGGGGCTGGCAGCAGGCAGGGCGGCC...GGGGTCAGGCGCCTGGGAAGGGGCCTTTGGTGGCCACCCTGGTGAGGACACCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CAGCCCCTCACGTCCTCTGCCGCTGGCATGACCTGGGGTGGGCTTGGTGGCTGCGACCTGGGGTGGGCTTaGTGGCTGCCTGGGCCCTGC +
Preference number: 4 (lower is better)
Translates to: QPLTSSAAGMTWGGLGGCDLGWA*WLPGPC
Trigger: GCAGGGCCCAGGCAGCCACCAAGCCCACCCCAGGTC...GCAGCCACCAAGCCCACCCCAGGTCATGCCAGCGGCAGAGGACGTGAGGGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GTGAGCCTCTCCCCCGCCCCCATGGGTGCTGGACCTGGCGGTGTCACACTGAGTAGGAGGGCAGAGGCCTaGGGCCGCCCTGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VSLSPAPMGAGPGGVTLSRRAEA*GRPACC
Trigger: GCAGCAGGCAGGGCGGCCCCAGGCCTCTGCCCTCCT...ACTCAGTGTGACACCGCCAGGTCCAGCACCCATGGGGGCGGGGGAGAGGCTCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp CGCCCTTGTGGGATGGTGTATGGGGACAAGAGCCTTGGCAGGAGGCCGGAGCCCCCAGGCGGCCACGGGTaGCGACACCCTCGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: RPCGMVYGDKSLGRRPEPPGGHG*RHPRGG
Trigger: TCCGCCTCGAGGGTGTCGTCACCCGTGGCCGCCTGG...GGGCTCCGGCCTCCTGCCAAGGCTCTTGTCCCCATACACCATCCCACAAGGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp GGAGAGGGGGCTCAGTGCTGGTGTCCCCGCGGGATAGCTGTGCTGGCTATGGGGCCCCGCCCCCATGGGTaGTGGACCTGGCGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: GEGAQCWCPRGIAVLAMGPRPHG*WTWRCH
Trigger: GTGACACCGCCAGGTCCAGCACCCATGGGGGCGGGG...CCCCATAGCCAGCACAGCTATCCCGCGGGGACACCAGCACTGAGCCCCCTCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CGCCCTTGTGGGATGGTGTATGGGGACAAGAGCCTTGGCAGGAGGCCGGAGCCCCGTGGGGGCAGCCCATaGGTGCGGGCAGGCGGTACC +
Preference number: 4 (lower is better)
Translates to: RPCGMVYGDKSLGRRPEPRGGSP*VRAGGT
Trigger: GGTACCGCCTGCCCGCACCCATGGGCTGCCCCCACG...GGGCTCCGGCCTCCTGCCAAGGCTCTTGTCCCCATACACCATCCCACAAGGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GGAGAGGGGGCTCAGTGCTGGTGTCCCCGCGGGATAGCTGTGCTGGCTATGGGGTCTCCCCCGCCCCCATaGGTGCTGGACCTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: GEGAQCWCPRGIAVLAMGSPPPP*VLDLAV
Trigger: CACCGCCAGGTCCAGCACCCATGGGGGCGGGGGAGA...CCCCATAGCCAGCACAGCTATCCCGCGGGGACACCAGCACTGAGCCCCCTCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GTGAGCCTCTCCCCCGCCCCCATGGGTGCTGGACCTGGCGGTGTCACACTGAGTCACTCCCTCTGGGGCTaGCAGGGGGCACACGGTGGG +
Preference number: 4 (lower is better)
Translates to: VSLSPAPMGAGPGGVTLSHSLWG*QGAHGG
Trigger: CCCACCGTGTGCCCCCTGCCAGCCCCAGAGGGAGTG...ACTCAGTGTGACACCGCCAGGTCCAGCACCCATGGGGGCGGGGGAGAGGCTCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp TCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAAGAGTGGCCGGGTGCAGGCTaGGGACGGCGGGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SRALPPPAPLWDGVWGQEWPGAG*GRRVQG
Trigger: GCCCTGGACCCGCCGTCCTCAGCCTGCACCCGGCCA...CTCTTGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp CGCCCTTGTGGGATGGTGTATGGGGACAAGAGCCTTGGCAGGAGGCCGGAGCCCCCTCGATCTCCCGAGTaGAACTGCGGCCCGCCCGGC +
Preference number: 4 (lower is better)
Translates to: RPCGMVYGDKSLGRRPEPPRSPE*NCGPPG
Trigger: GCCGGGCGGGCCGCAGTTTCACTCGGGAGATCGAGG...GGGCTCCGGCCTCCTGCCAAGGCTCTTGTCCCCATACACCATCCCACAAGGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp GGAGAGGGGGCTCAGTGCTGGTGTCCCCGCGGGATAGCTGTGCTGGCTATGGGGCCTCTGCCGCTGGCATaGCCTGGGGTGGGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: GEGAQCWCPRGIAVLAMGPLPLA*PGVGLV
Trigger: CACCAAGCCCACCCCAGGTCATGCCAGCGGCAGAGG...CCCCATAGCCAGCACAGCTATCCCGCGGGGACACCAGCACTGAGCCCCCTCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp CAGCCCCTCACGTCCTCTGCCGCTGGCATGACCTGGGGTGGGCTTGGTGGCTGCCCCTGTTGGACTCTGTaGCGTGGAGGCCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: QPLTSSAAGMTWGGLGGCPCWTL*RGGPRL
Trigger: GAGCCTGGGGCCTCCACGTCACAGAGTCCAACAGGG...GCAGCCACCAAGCCCACCCCAGGTCATGCCAGCGGCAGAGGACGTGAGGGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp GGGGACAGGTGTCCTCACCAGGGTGGCCACCAAAGGCCCCTTCCCAGGCGCCTGGCCATGATGCCTCCATaGAGGCGGCCAGCCGGACTG +
Preference number: 4 (lower is better)
Translates to: GDRCPHQGGHQRPLPRRLAMMPP*RRPAGL
Trigger: CAGTCCGGCTGGCCGCCTTCATGGAGGCATCATGGC...CAGGCGCCTGGGAAGGGGCCTTTGGTGGCCACCCTGGTGAGGACACCTGTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp CAGGTGTCCTCACCAGGGTGGCCACCAAAGGCCCCTTCCCAGGCGCCTGACCCCCGGCGGGTCCAGGGCTaGACGGTAGTAGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: QVSSPGWPPKAPSQAPDPRRVQG*TVVAEV
Trigger: GACCTCAGCTACTACCGTGCAGCCCTGGACCCGCCG...GGGGTCAGGCGCCTGGGAAGGGGCCTTTGGTGGCCACCCTGGTGAGGACACCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp GGCTTCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACACTCGCAGCGGCTCAGTaGCCAGGGGCAGCGGCGGCA +
Preference number: 4 (lower is better)
Translates to: GFQGTSTPSALVGWCMGTLAAAQ*PGAAAA
Trigger: TGCCGCCGCTGCCCCTGGGCACTGAGCCGCTGCGAG...TGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGAAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GGGGACAGGTGTCCTCACCAGGGTGGCCACCAAAGGCCCCTTCCCAGGCGCCTGCAGCCCCAGTCCCCGTaGATGGTCGACGTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GDRCPHQGGHQRPLPRRLQPQSP*MVDVSS
Trigger: GCTGGACACGTCGACCATCCACGGGGACTGGGGCTG...CAGGCGCCTGGGAAGGGGCCTTTGGTGGCCACCCTGGTGAGGACACCTGTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GGAGAGGGGGCTCAGTGCTGGTGTCCCCGCGGGATAGCTGTGCTGGCTATGGGGCACATCCCGCTGCCCTaGCACCCGCAGCCTCCCGTA +
Preference number: 4 (lower is better)
Translates to: GEGAQCWCPRGIAVLAMGHIPLP*HPQPPV
Trigger: TACGGGAGGCTGCGGGTGCCAGGGCAGCGGGATGTG...CCCCATAGCCAGCACAGCTATCCCGCGGGGACACCAGCACTGAGCCCCCTCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GGGGACAGGTGTCCTCACCAGGGTGGCCACCAAAGGCCCCTTCCCAGGCGCCTGAGGGCGCGCACGTCCTaGGCGTTCATGCGTAGCACC +
Preference number: 4 (lower is better)
Translates to: GDRCPHQGGHQRPLPRRLRARTS*AFMRST
Trigger: GGTGCTACGCATGAACGCCCAGGACGTGCGCGCCCT...CAGGCGCCTGGGAAGGGGCCTTTGGTGGCCACCCTGGTGAGGACACCTGTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GGGGACAGGTGTCCTCACCAGGGTGGCCACCAAAGGCCCCTTCCCAGGCGCCTGCACGTCCTCTGCCGCTaGCATGACCTGGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GDRCPHQGGHQRPLPRRLHVLCR*HDLGWA
Trigger: AGCCCACCCCAGGTCATGCCAGCGGCAGAGGACGTG...CAGGCGCCTGGGAAGGGGCCTTTGGTGGCCACCCTGGTGAGGACACCTGTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp CCCCCACCACACACACACATGCACGCACACAGAGGCAGGCGAGTGATGTCCCTGAGCGGGTGCCCGGCTTaGGGCCGGAGACGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PPPHTHMHAHRGRRVMSLSGCPA*GRRRWL
Trigger: GAGCCACCGTCTCCGGCCTCAAGCCGGGCACCCGCT...CAGGGACATCACTCGCCTGCCTCTGTGTGCGTGCATGTGTGTGTGTGGTGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp CAGCCCCTCACGTCCTCTGCCGCTGGCATGACCTGGGGTGGGCTTGGTGGCTGCGGGGGACCCAGCTCGTaGGCAGCCAGTTGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: QPLTSSAAGMTWGGLGGCGGPSS*AASCSG
Trigger: ACCAGAACAACTGGCTGCGCACGAGCTGGGTCCCCC...GCAGCCACCAAGCCCACCCCAGGTCATGCCAGCGGCAGAGGACGTGAGGGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp CAGCCCCTCACGTCCTCTGCCGCTGGCATGACCTGGGGTGGGCTTGGTGGCTGCACCAGCAGGCTGGCCTaGACCAGGCTTGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QPLTSSAAGMTWGGLGGCTSRLA*TRLVCW
Trigger: CCAGCAGACAAGCCTGGTGCAGGCCAGCCTGCTGGT...GCAGCCACCAAGCCCACCCCAGGTCATGCCAGCGGCAGAGGACGTGAGGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp CAGCCCCTCACGTCCTCTGCCGCTGGCATGACCTGGGGTGGGCTTGGTGGCTGCCTCGGTACCGGCCCATaGGGATGGAGTCCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: QPLTSSAAGMTWGGLGGCLGTGP*GWSPAS
Trigger: ACTGGCTGGACTCCATCCGCATGGGCCGGTACCGAG...GCAGCCACCAAGCCCACCCCAGGTCATGCCAGCGGCAGAGGACGTGAGGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp GGCTTCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAGGGTTCCTGCTTCCCTaGCTGCCAACGGCCCCCGGG +
Preference number: 4 (lower is better)
Translates to: GFQGTSTPSALVGWCMGTGFLLP*LPTAPG
Trigger: CCCGGGGGCCGTTGGCAGGCAGGGAAGCAGGAACCC...TGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGAAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp GTGAGCCTCTCCCCCGCCCCCATGGGTGCTGGACCTGGCGGTGTCACACTGAGTGGAGAGGGGGCTCAGTaGTGGTGTCCCCGCGGGATA +
Preference number: 4 (lower is better)
Translates to: VSLSPAPMGAGPGGVTLSGEGAQ*WCPRGI
Trigger: TATCCCGCGGGGACACCAGCACTGAGCCCCCTCTCC...ACTCAGTGTGACACCGCCAGGTCCAGCACCCATGGGGGCGGGGGAGAGGCTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GGGGACAGGTGTCCTCACCAGGGTGGCCACCAAAGGCCCCTTCCCAGGCGCCTGTCCACCTCCATGGCCTaGCTGAAGCGGCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: GDRCPHQGGHQRPLPRRLSTSMA*LKRPQP
Trigger: AGGCTGTGGCCGCTTCAGCCAGGCCATGGAGGTGGA...CAGGCGCCTGGGAAGGGGCCTTTGGTGGCCACCCTGGTGAGGACACCTGTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CAGGTGTCCTCACCAGGGTGGCCACCAAAGGCCCCTTCCCAGGCGCCTGACCCCCTGCCTGGGCCCTGCTaGCTGTACATCAGAGGTGCC +
Preference number: 4 (lower is better)
Translates to: QVSSPGWPPKAPSQAPDPLPGPC*LYIRGA
Trigger: GGCACCTCTGATGTACAGCCAGCAGGGCCCAGGCAG...GGGGTCAGGCGCCTGGGAAGGGGCCTTTGGTGGCCACCCTGGTGAGGACACCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GGGGACAGGTGTCCTCACCAGGGTGGCCACCAAAGGCCCCTTCCCAGGCGCCTGGGTGCAGTTCAGAAGTaGCCCCTGGCTCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: GDRCPHQGGHQRPLPRRLGAVQK*PLAPAS
Trigger: GGAGGCTGGAGCCAGGGGCCACTTCTGAACTGCACC...CAGGCGCCTGGGAAGGGGCCTTTGGTGGCCACCCTGGTGAGGACACCTGTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GGGGACAGGTGTCCTCACCAGGGTGGCCACCAAAGGCCCCTTCCCAGGCGCCTGAGAGGTGTAGAGAGCTaGCCGCGGCACCTGGATGGG +
Preference number: 4 (lower is better)
Translates to: GDRCPHQGGHQRPLPRRLRGVES*PRHLDG
Trigger: CCCATCCAGGTGCCGCGGCCAGCTCTCTACACCTCT...CAGGCGCCTGGGAAGGGGCCTTTGGTGGCCACCCTGGTGAGGACACCTGTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp GGGGACAGGTGTCCTCACCAGGGTGGCCACCAAAGGCCCCTTCCCAGGCGCCTGATGGAGTCCCACCCATaGGCCGGATACGTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GDRCPHQGGHQRPLPRRLMESHP*AGYVSQ
Trigger: CTGGCTCACGTATCCGGCTCATGGGTGGGACTCCAT...CAGGCGCCTGGGAAGGGGCCTTTGGTGGCCACCCTGGTGAGGACACCTGTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp GCTCACCCAGGCAGAGACGAGGGTGGGCCTGGTGCTGGTGCAGTTCAGAAGTGGCCTCACCTCCACCAGTaGGGACGAGTCGGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: AHPGRDEGGPGAGAVQKWPHLHQ*GRVGPR
Trigger: ACGGGGGCCGACTCGTCCTCACTGGTGGAGGTGAGG...CCACTTCTGAACTGCACCAGCACCAGGCCCACCCTCGTCTCTGCCTGGGTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp CGCGGCACCTGGATGGGGCTGAGACTCCCCGAATTATTGCAGGAGGGAGAGGGGGGGAGGACCCAGACCTaGGATACAGCCGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RGTWMGLRLPELLQEGEGGRTQT*DTAGVG
Trigger: GCCCACCCCGGCTGTATCTCAGGTCTGGGTCCTCCC...CCCCTCTCCCTCCTGCAATAATTCGGGGAGTCTCAGCCCCATCCAGGTGCCGCG
67% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp CGCGGCACCTGGATGGGGCTGAGACTCCCCGAATTATTGCAGGAGGGAGAGGGGGGCGGCCAGCCGGACTaGCCGGGAACCCTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: RGTWMGLRLPELLQEGEGGGQPD*PGTLFS
Trigger: GGAAAACAGGGTTCCCGGTCAGTCCGGCTGGCCGCC...CCCCTCTCCCTCCTGCAATAATTCGGGGAGTCTCAGCCCCATCCAGGTGCCGCG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp GGGGACAGGTGTCCTCACCAGGGTGGCCACCAAAGGCCCCTTCCCAGGCGCCTGCCGGAGCCCCGACTCTaGCACTTGGTTGCAGTGCAA +
Preference number: 4 (lower is better)
Translates to: GDRCPHQGGHQRPLPRRLPEPRL*HLVAVQ
Trigger: TTGCACTGCAACCAAGTGTCAGAGTCGGGGCTCCGG...CAGGCGCCTGGGAAGGGGCCTTTGGTGGCCACCCTGGTGAGGACACCTGTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp GGCTTCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAGTCGGCCCCCGTCACTaGCTCCGAGAAGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GFQGTSTPSALVGWCMGTVGPRH*LREGSQ
Trigger: CTGGCTGCCTTCTCGGAGGCAGTGACGGGGGCCGAC...TGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGAAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp CCCCTTCCCAGGCGCCTGACCCCTGATAACTCCAGGTCCTGTGGCGAAGCCTTCGGCTGCTCGGGCTCCTaGCACAGCAGCGAGACGCTG +
Preference number: 4 (lower is better)
Translates to: PLPRRLTPDNSRSCGEAFGCSGS*HSSETL
Trigger: CAGCGTCTCGCTGCTGTGGCAGGAGCCCGAGCAGCC...GAAGGCTTCGCCACAGGACCTGGAGTTATCAGGGGTCAGGCGCCTGGGAAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp GGAGAGGGGGCTCAGTGCTGGTGTCCCCGCGGGATAGCTGTGCTGGCTATGGGGTGGCCGAGGAGAAGGTaGGGAAGGCGATGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GEGAQCWCPRGIAVLAMGWPRRR*GRRWPL
Trigger: CAGAGGCCATCGCCTTCCGCACCTTCTCCTCGGCCA...CCCCATAGCCAGCACAGCTATCCCGCGGGGACACCAGCACTGAGCCCCCTCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp GCACACAGAGGCAGGCGAGTGATGTCCCTGTTGGACTCTGTGACGTGGAGGCCCCCCCACCGCCACCGCTaGCCCCTCGGAGGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: AHRGRRVMSLLDSVTWRPPHRHR*PLGGQS
Trigger: GCTTTGACCTCCGAGGGGGCAGCGGTGGCGGTGGGG...GGGCCTCCACGTCACAGAGTCCAACAGGGACATCACTCGCCTGCCTCTGTGTGC
67% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp CCCCTTCCCAGGCGCCTGACCCCTGATAACTCCAGGTCCTGTGGCGAAGCCTTCGCCCCTCACGTCCTCTaGCGCTGGCATGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: PLPRRLTPDNSRSCGEAFAPHVL*RWHDLG
Trigger: CCCCAGGTCATGCCAGCGGCAGAGGACGTGAGGGGC...GAAGGCTTCGCCACAGGACCTGGAGTTATCAGGGGTCAGGCGCCTGGGAAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp GGGGACAGGTGTCCTCACCAGGGTGGCCACCAAAGGCCCCTTCCCAGGCGCCTGTGGGCCTGGTGCTGGTaGAGTTCAGAAGTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GDRCPHQGGHQRPLPRRLWAWCW*SSEVAP
Trigger: AGGGGCCACTTCTGAACTGCACCAGCACCAGGCCCA...CAGGCGCCTGGGAAGGGGCCTTTGGTGGCCACCCTGGTGAGGACACCTGTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp GGCTTCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACATCCTGCTTCCCTGCCTaGCAACGGCCCCCGGGATGG +
Preference number: 4 (lower is better)
Translates to: GFQGTSTPSALVGWCMGTSCFPA*QRPPGW
Trigger: CCATCCCGGGGGCCGTTGGCAGGCAGGGAAGCAGGA...TGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGAAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GGGGACAGGTGTCCTCACCAGGGTGGCCACCAAAGGCCCCTTCCCAGGCGCCTGACACGCATTTGCCGATaGGCACGAGCCACTCGCCCT +
Preference number: 4 (lower is better)
Translates to: GDRCPHQGGHQRPLPRRLTRICR*ARATRP
Trigger: AGGGCGAGTGGCTCGTGCCCATCGGCAAATGCGTGT...CAGGCGCCTGGGAAGGGGCCTTTGGTGGCCACCCTGGTGAGGACACCTGTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GCTCACCCAGGCAGAGACGAGGGTGGGCCTGGTGCTGGTGCAGTTCAGAAGTGGGCAGGCTTGGGCGGCTaGAGCTGCGGAGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: AHPGRDEGGPGAGAVQKWAGLGG*SCGVAV
Trigger: CACAGCCACTCCGCAGCTCCAGCCGCCCAAGCCTGC...CCACTTCTGAACTGCACCAGCACCAGGCCCACCCTCGTCTCTGCCTGGGTGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GGAGAGGGGGCTCAGTGCTGGTGTCCCCGCGGGATAGCTGTGCTGGCTATGGGGAGGCAGAGACGAGGGTaGGCCTGGTGCTGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: GEGAQCWCPRGIAVLAMGRQRRG*AWCWCS
Trigger: ACTGCACCAGCACCAGGCCCACCCTCGTCTCTGCCT...CCCCATAGCCAGCACAGCTATCCCGCGGGGACACCAGCACTGAGCCCCCTCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CAGGTGTCCTCACCAGGGTGGCCACCAAAGGCCCCTTCCCAGGCGCCTGACCCCCCCCCAGCGCCCTTGTaGGATGGTGTATGGGGACAA +
Preference number: 4 (lower is better)
Translates to: QVSSPGWPPKAPSQAPDPPPAPL*DGVWGQ
Trigger: TTGTCCCCATACACCATCCCACAAGGGCGCTGGGGG...GGGGTCAGGCGCCTGGGAAGGGGCCTTTGGTGGCCACCCTGGTGAGGACACCTG
67% GC, longest homopolymer 9 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CCCCTTCCCAGGCGCCTGACCCCTGATAACTCCAGGTCCTGTGGCGAAGCCTTCGCAGGGGGCACACGGTaGGGTTCCTGCTTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: PLPRRLTPDNSRSCGEAFAGGTR*GSCFPA
Trigger: GGCAGGGAAGCAGGAACCCCACCGTGTGCCCCCTGC...GAAGGCTTCGCCACAGGACCTGGAGTTATCAGGGGTCAGGCGCCTGGGAAGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp TCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAAGAGGCTCGCCACTCCCTCTaGGGCTGGCAGGGGGCACAC +
Preference number: 4 (lower is better)
Translates to: SRALPPPAPLWDGVWGQEARHSL*GWQGAH
Trigger: GTGTGCCCCCTGCCAGCCCCAGAGGGAGTGGCGAGC...CTCTTGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp AGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAAGAGCCTCTGTGGCGGTGGCCCTaGGACTCTCAGGGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: RALPPPAPLWDGVWGQEPLWRWP*DSQGCG
Trigger: TCCGCAGCCCTGAGAGTCTCAGGGCCACCGCCACAG...AGGCTCTTGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp CAGGTGTCCTCACCAGGGTGGCCACCAAAGGCCCCTTCCCAGGCGCCTGACCCCACCCTGTTTTCCTGTTaGAGCAGCGGTGAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: QVSSPGWPPKAPSQAPDPTLFSC*SSGESR
Trigger: CCGGCTCTCACCGCTGCTTCAACAGGAAAACAGGGT...GGGGTCAGGCGCCTGGGAAGGGGCCTTTGGTGGCCACCCTGGTGAGGACACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp CGCCCTTGTGGGATGGTGTATGGGGACAAGAGCCTTGGCAGGAGGCCGGAGCCCCCAGCACACCAGGCATaGTGTTGCAGTCGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: RPCGMVYGDKSLGRRPEPPAHQA*CCSRAG
Trigger: CCCTGCGCGACTGCAACAGCATGCCTGGTGTGCTGG...GGGCTCCGGCCTCCTGCCAAGGCTCTTGTCCCCATACACCATCCCACAAGGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp GGAGAGGGGGCTCAGTGCTGGTGTCCCCGCGGGATAGCTGTGCTGGCTATGGGGCCTCGTAGCCGGCACTaGACACGCATTTGCCGATGG +
Preference number: 4 (lower is better)
Translates to: GEGAQCWCPRGIAVLAMGPRSRH*TRICRW
Trigger: CCATCGGCAAATGCGTGTGCAGTGCCGGCTACGAGG...CCCCATAGCCAGCACAGCTATCCCGCGGGGACACCAGCACTGAGCCCCCTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp AGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAAGAGCCTGGTGCCGCTCCCACATaGCTCGCAGCGGCTCAGTGC +
Preference number: 4 (lower is better)
Translates to: RALPPPAPLWDGVWGQEPGAAPT*LAAAQC
Trigger: GCACTGAGCCGCTGCGAGGCATGTGGGAGCGGCACC...AGGCTCTTGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp GGGGACAGGTGTCCTCACCAGGGTGGCCACCAAAGGCCCCTTCCCAGGCGCCTGTGCATGATGGTGAACTaGCCGTCGTGGGTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GDRCPHQGGHQRPLPRRLCMMVN*PSWVLR
Trigger: CCTGAGGACCCACGACGGGCAGTTCACCATCATGCA...CAGGCGCCTGGGAAGGGGCCTTTGGTGGCCACCCTGGTGAGGACACCTGTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp GCTTCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAAGCTGTACATCAGAGGTaGCGGCGGGGCCCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: ASRALPPPAPLWDGVWGQAVHQR*RRGPWV
Trigger: CACCCAGGGGCCCCGCCGGCACCTCTGATGTACAGC...TTGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp CAGCCCCTCACGTCCTCTGCCGCTGGCATGACCTGGGGTGGGCTTGGTGGCTGCAAAAGAGAAGGTGCCTaGCCTGGGGGACAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: QPLTSSAAGMTWGGLGGCKREGA*PGGQVS
Trigger: GGACACCTGTCCCCCAGGGCAGGCACCTTCTCTTTT...GCAGCCACCAAGCCCACCCCAGGTCATGCCAGCGGCAGAGGACGTGAGGGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp GTGAGCCTCTCCCCCGCCCCCATGGGTGCTGGACCTGGCGGTGTCACACTGAGTGAGGGGCCACACTTTTaGAAGTGCCAGGCCCACGGT +
Preference number: 4 (lower is better)
Translates to: VSLSPAPMGAGPGGVTLSEGPHF*KCQAHG
Trigger: ACCGTGGGCCTGGCACTTGCAAAAGTGTGGCCCCTC...ACTCAGTGTGACACCGCCAGGTCCAGCACCCATGGGGGCGGGGGAGAGGCTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CAGGTGTCCTCACCAGGGTGGCCACCAAAGGCCCCTTCCCAGGCGCCTGACCCCCCTGGTACGTGTGGATaGGCTGGAAGGACTCGTCCA +
Preference number: 4 (lower is better)
Translates to: QVSSPGWPPKAPSQAPDPPGTCG*AGRTRP
Trigger: TGGACGAGTCCTTCCAGCCCATCCACACGTACCAGG...GGGGTCAGGCGCCTGGGAAGGGGCCTTTGGTGGCCACCCTGGTGAGGACACCTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CCCCTTCCCAGGCGCCTGACCCCTGATAACTCCAGGTCCTGTGGCGAAGCCTTCGGCTTTCTTGTGTGCTaGCCCCCAGGTCGCGGTCCG +
Preference number: 4 (lower is better)
Translates to: PLPRRLTPDNSRSCGEAFGFLVC*PPGRGP
Trigger: CGGACCGCGACCTGGGGGCCAGCACACAAGAAAGCC...GAAGGCTTCGCCACAGGACCTGGAGTTATCAGGGGTCAGGCGCCTGGGAAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CCCCTTCCCAGGCGCCTGACCCCTGATAACTCCAGGTCCTGTGGCGAAGCCTTCTGTGGGCCAGCAGGTTaGCCACCAGCAGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: PLPRRLTPDNSRSCGEAFCGPAG*PPAGWP
Trigger: AGGCCAGCCTGCTGGTGGCCAACCTGCTGGCCCACA...GAAGGCTTCGCCACAGGACCTGGAGTTATCAGGGGTCAGGCGCCTGGGAAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GGCTTCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACACGGATCACCACCACCTaGGACGGGGCTGCCTGGTTC +
Preference number: 4 (lower is better)
Translates to: GFQGTSTPSALVGWCMGTRITTT*DGAAWF
Trigger: GAACCAGGCAGCCCCGTCCCAGGTGGTGGTGATCCG...TGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CCCCTTCCCAGGCGCCTGACCCCTGATAACTCCAGGTCCTGTGGCGAAGCCTTCACAGCAGCGAGACGCTaGTCTGCCCCGCCCGCTCTT +
Preference number: 4 (lower is better)
Translates to: PLPRRLTPDNSRSCGEAFTAARR*SAPPAL
Trigger: AAGAGCGGGCGGGGCAGACCAGCGTCTCGCTGCTGT...GAAGGCTTCGCCACAGGACCTGGAGTTATCAGGGGTCAGGCGCCTGGGAAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GGGGACAGGTGTCCTCACCAGGGTGGCCACCAAAGGCCCCTTCCCAGGCGCCTGAGGCAGGAAGACAGGTaGGGGTGCCTGTCCATTCTG +
Preference number: 4 (lower is better)
Translates to: GDRCPHQGGHQRPLPRRLRQEDR*GCLSIL
Trigger: CAGAATGGACAGGCACCCCCACCTGTCTTCCTGCCT...CAGGCGCCTGGGAAGGGGCCTTTGGTGGCCACCCTGGTGAGGACACCTGTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GCTCACCCAGGCAGAGACGAGGGTGGGCCTGGTGCTGGTGCAGTTCAGAAGTGGACCGGCCCATGCGGATaGAGTCCAGCCAGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: AHPGRDEGGPGAGAVQKWTGPCG*SPASPP
Trigger: TGGGGGACTGGCTGGACTCCATCCGCATGGGCCGGT...CCACTTCTGAACTGCACCAGCACCAGGCCCACCCTCGTCTCTGCCTGGGTGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp AGGCGCCTGACCCCTGATAACTCCAGGTCCTGTGGCGAAGCCTTCAGCTCCTCCGCCGCTGGCATGACCTaGGGTGGGCTTGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RRLTPDNSRSCGEAFSSSAAGMT*GGLGGC
Trigger: GCAGCCACCAAGCCCACCCCAGGTCATGCCAGCGGC...GGAGGAGCTGAAGGCTTCGCCACAGGACCTGGAGTTATCAGGGGTCAGGCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GCTCACCCAGGCAGAGACGAGGGTGGGCCTGGTGCTGGTGCAGTTCAGAAGTGGGGTGGAGGCTGCAGGTaGCCTCCTCGGCTAGAGGGA +
Preference number: 4 (lower is better)
Translates to: AHPGRDEGGPGAGAVQKWGGGCR*PPRLEG
Trigger: TCCCTCTAGCCGAGGAGGCCACCTGCAGCCTCCACC...CCACTTCTGAACTGCACCAGCACCAGGCCCACCCTCGTCTCTGCCTGGGTGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CGCCCTTGTGGGATGGTGTATGGGGACAAGAGCCTTGGCAGGAGGCCGGAGCCCGGTTGCAGTGCAACCTaGGACGGGGCATCACCCCTC +
Preference number: 4 (lower is better)
Translates to: RPCGMVYGDKSLGRRPEPGCSAT*DGASPL
Trigger: GAGGGGTGATGCCCCGTCCCAGGTTGCACTGCAACC...GGGCTCCGGCCTCCTGCCAAGGCTCTTGTCCCCATACACCATCCCACAAGGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GCACACAGAGGCAGGCGAGTGATGTCCCTGTTGGACTCTGTGACGTGGAGGCCCTGGGGACAAGAGCCTTaGCAGGAGGCCGGAGCCCCG +
Preference number: 4 (lower is better)
Translates to: AHRGRRVMSLLDSVTWRPWGQEP*QEAGAP
Trigger: CGGGGCTCCGGCCTCCTGCCAAGGCTCTTGTCCCCA...GGGCCTCCACGTCACAGAGTCCAACAGGGACATCACTCGCCTGCCTCTGTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp GCTTCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAACATGAGCCGGATACGTaGGCCAGCCCCAGTCCCCGT +
Preference number: 4 (lower is better)
Translates to: ASRALPPPAPLWDGVWGQHEPDT*ASPSPR
Trigger: ACGGGGACTGGGGCTGGCTCACGTATCCGGCTCATG...TTGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp GTGAGCCTCTCCCCCGCCCCCATGGGTGCTGGACCTGGCGGTGTCACACTGAGTACTCGTCCACCTCGTTaGTGGAGTCCCACCCATGAG +
Preference number: 4 (lower is better)
Translates to: VSLSPAPMGAGPGGVTLSTRPPR*WSPTHE
Trigger: CTCATGGGTGGGACTCCATCAACGAGGTGGACGAGT...ACTCAGTGTGACACCGCCAGGTCCAGCACCCATGGGGGCGGGGGAGAGGCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp ACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGAGGCGGCCACAGCCTGCTaGGGTGCGGGCTCGGACCTG +
Preference number: 4 (lower is better)
Translates to: TLLQVPGPRCLHDCEDPEAATAC*GAGSDL
Trigger: CAGGTCCGAGCCCGCACCTCAGCAGGCTGTGGCCGC...CTCTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp CAGCTGAGGACATCTCATGTGCTCTGCCATGATGCCTCCATGAAGGCGGCCAGCACGGGCACATCCCGCTaGCCTGGCACCCGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QLRTSHVLCHDASMKAASTGTSR*PGTRSL
Trigger: GAGGCTGCGGGTGCCAGGGCAGCGGGATGTGCCCGT...GCTGGCCGCCTTCATGGAGGCATCATGGCAGAGCACATGAGATGTCCTCAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp GGAGAGGGGGCTCAGTGCTGGTGTCCCCGCGGGATAGCTGTGCTGGCTATGGGGCTCAGTCACAATCATTaGCAGGCGGCCACGGGTGAC +
Preference number: 4 (lower is better)
Translates to: GEGAQCWCPRGIAVLAMGLSHNH*QAATGD
Trigger: GTCACCCGTGGCCGCCTGGCAATGATTGTGACTGAG...CCCCATAGCCAGCACAGCTATCCCGCGGGGACACCAGCACTGAGCCCCCTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp TCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAAGAGGAGAAGCGAGGCCGCTaGGCCCGGTCCTTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: SRALPPPAPLWDGVWGQEEKRGR*ARSLCQ
Trigger: TTGGCACAAGGACCGGGCGCAGCGGCCTCGCTTCTC...CTCTTGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp GTGAGCCTCTCCCCCGCCCCCATGGGTGCTGGACCTGGCGGTGTCACACTGAGTGACACTTGGTTGCAGTaGAACCTGGGACGGGGCATC +
Preference number: 4 (lower is better)
Translates to: VSLSPAPMGAGPGGVTLSDTWLQ*NLGRGI
Trigger: GATGCCCCGTCCCAGGTTGCACTGCAACCAAGTGTC...ACTCAGTGTGACACCGCCAGGTCCAGCACCCATGGGGGCGGGGGAGAGGCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CGCGGCACCTGGATGGGGCTGAGACTCCCCGAATTATTGCAGGAGGGAGAGGGGGGAGATCAGGTTCACTaGTGCCGAGGGTGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: RGTWMGLRLPELLQEGEGGDQVH*CRGWPG
Trigger: ACCCGGCCACCCTCGGCACCAGTGAACCTGATCTCC...CCCCTCTCCCTCCTGCAATAATTCGGGGAGTCTCAGCCCCATCCAGGTGCCGCG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GCTCACCCAGGCAGAGACGAGGGTGGGCCTGGTGCTGGTGCAGTTCAGAAGTGGGGATCTTCCCGCCCGTaGTGGTGTAGGCAGCATCCG +
Preference number: 4 (lower is better)
Translates to: AHPGRDEGGPGAGAVQKWGSSRP*WCRQHP
Trigger: CGGATGCTGCCTACACCACCACGGGCGGGAAGATCC...CCACTTCTGAACTGCACCAGCACCAGGCCCACCCTCGTCTCTGCCTGGGTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CCCCCACCACACACACACATGCACGCACACAGAGGCAGGCGAGTGATGTCCCTGGACGAAGGCAGGGGGTaGGCACCTGCTGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: PPPHTHMHAHRGRRVMSLDEGRG*APADCG
Trigger: GCCACAGTCAGCAGGTGCCCACCCCCTGCCTTCGTC...CAGGGACATCACTCGCCTGCCTCTGTGTGCGTGCATGTGTGTGTGTGGTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GCTTCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAATGGCATGACCTGGGGTaGGCTTGGTGGCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: ASRALPPPAPLWDGVWGQWHDLG*AWWLPG
Trigger: CCCAGGCAGCCACCAAGCCCACCCCAGGTCATGCCA...TTGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GGAGAGGGGGCTCAGTGCTGGTGTCCCCGCGGGATAGCTGTGCTGGCTATGGGGAGCGCCCTTGTGGGATaGTGTATGGGGACAAGAGCC +
Preference number: 4 (lower is better)
Translates to: GEGAQCWCPRGIAVLAMGSALVG*CMGTRA
Trigger: GGCTCTTGTCCCCATACACCATCCCACAAGGGCGCT...CCCCATAGCCAGCACAGCTATCCCGCGGGGACACCAGCACTGAGCCCCCTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GCACACAGAGGCAGGCGAGTGATGTCCCTGTTGGACTCTGTGACGTGGAGGCCCCAACGGCCCCCGGGATaGGGCTTTCTCACCCTGGGT +
Preference number: 4 (lower is better)
Translates to: AHRGRRVMSLLDSVTWRPQRPPG*GFLTLG
Trigger: ACCCAGGGTGAGAAAGCCCCATCCCGGGGGCCGTTG...GGGCCTCCACGTCACAGAGTCCAACAGGGACATCACTCGCCTGCCTCTGTGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR CAA 72 bp AGCGCCCTTGTGGGATGGTGTATGGGGACAAGAGCCTaGGCAGGAGGCCGGAGCCCCGACTCTGACACTTGG +
Preference number: 4 (lower is better)
Translates to: SALVGWCMGTRA*AGGRSPDSDTW
Trigger: CCAAGTGTCAGAGTCGGGGCTCCGGCCTCCTGCCAAGGCTCTTGTCCCCATACACCATCCCACAAGGGCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp AGGCGCCTGACCCCTGATAACTCCAGGTCCTGTGGCGAAGCCTTCAGCTCCTCCCAAGGTCGGCACCTGTaGAGCTCTCGTCGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: RRLTPDNSRSCGEAFSSSQGRHL*SSRRPQ
Trigger: TTGCGGCCGACGAGAGCTTCACAGGTGCCGACCTTG...GGAGGAGCTGAAGGCTTCGCCACAGGACCTGGAGTTATCAGGGGTCAGGCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp AGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAAGAGCCTCTGGTCCCCAGGGGCTaGCTTGTAGAAGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RALPPPAPLWDGVWGQEPLVPRG*LVEAQL
Trigger: GAGCTGGGCTTCTACAAGTCAGCCCCTGGGGACCAG...AGGCTCTTGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp CCCCCACCACACACACACATGCACGCACACAGAGGCAGGCGAGTGATGTCCCTGGACATAGCCCAGGTCTaGGAGGTAGCGCATGCCGGC +
Preference number: 4 (lower is better)
Translates to: PPPHTHMHAHRGRRVMSLDIAQV*EVAHAG
Trigger: GCCGGCATGCGCTACCTCTCAGACCTGGGCTATGTC...CAGGGACATCACTCGCCTGCCTCTGTGTGCGTGCATGTGTGTGTGTGGTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp CCCCCACCACACACACACATGCACGCACACAGAGGCAGGCGAGTGATGTCCCTGCCCTTCCCAGGCGCCTaGCCCCTGATAACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PPPHTHMHAHRGRRVMSLPFPGA*PLITPG
Trigger: ACCTGGAGTTATCAGGGGTCAGGCGCCTGGGAAGGG...CAGGGACATCACTCGCCTGCCTCTGTGTGCGTGCATGTGTGTGTGTGGTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp CAGCTGAGGACATCTCATGTGCTCTGCCATGATGCCTCCATGAAGGCGGCCAGCGGGGCACAAAGCGGGTaGCGCTCCCACATGCCTCGC +
Preference number: 4 (lower is better)
Translates to: QLRTSHVLCHDASMKAASGAQSG*RSHMPR
Trigger: GCGAGGCATGTGGGAGCGGCACCCGCTTTGTGCCCC...GCTGGCCGCCTTCATGGAGGCATCATGGCAGAGCACATGAGATGTCCTCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp TCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAAGAGCACAGCCTGCTGAGGTaGGGGCTCGGACCTGGAACA +
Preference number: 4 (lower is better)
Translates to: SRALPPPAPLWDGVWGQEHSLLR*GLGPGT
Trigger: TGTTCCAGGTCCGAGCCCGCACCTCAGCAGGCTGTG...CTCTTGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp CGCGGCACCTGGATGGGGCTGAGACTCCCCGAATTATTGCAGGAGGGAGAGGGGCTGAGAGGTAGCGCATaGCGGCACCCACTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: RGTWMGLRLPELLQEGEGLRGSA*RHPLLS
Trigger: TGAGAGGAGTGGGTGCCGGCATGCGCTACCTCTCAG...CCCCTCTCCCTCCTGCAATAATTCGGGGAGTCTCAGCCCCATCCAGGTGCCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp CGCGGCACCTGGATGGGGCTGAGACTCCCCGAATTATTGCAGGAGGGAGAGGGGTGGCTGCCTGGGCCCTaGTGGCTGTACATCAGAGGT +
Preference number: 4 (lower is better)
Translates to: RGTWMGLRLPELLQEGEGWLPGP*WLYIRG
Trigger: ACCTCTGATGTACAGCCAGCAGGGCCCAGGCAGCCA...CCCCTCTCCCTCCTGCAATAATTCGGGGAGTCTCAGCCCCATCCAGGTGCCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp GGGGACAGGTGTCCTCACCAGGGTGGCCACCAAAGGCCCCTTCCCAGGCGCCTGCTTAGTCTCCCCATATaGTACAGGAAGGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GDRCPHQGGHQRPLPRRLLSLPI*YRKGWA
Trigger: AGCCCACCCCTTCCTGTAGCATATGGGGAGACTAAG...CAGGCGCCTGGGAAGGGGCCTTTGGTGGCCACCCTGGTGAGGACACCTGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp AGGCGCCTGACCCCTGATAACTCCAGGTCCTGTGGCGAAGCCTTCAGCTCCTCCACACGGTGGGGTTCCTaGTTCCCTGCCTGCCAACGG +
Preference number: 4 (lower is better)
Translates to: RRLTPDNSRSCGEAFSSSTRWGS*FPACQR
Trigger: CCGTTGGCAGGCAGGGAAGCAGGAACCCCACCGTGT...GGAGGAGCTGAAGGCTTCGCCACAGGACCTGGAGTTATCAGGGGTCAGGCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GCACAGAGAGGGAAAGTTCTGGAACCTAGGCTTTCGACGGCCACACTAGCCTGCGCTGGAGCTGCGGAGTaGCTGTGGGGAGGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: AQRGKVLEPRLSTATLACAGAAE*LWGGQR
Trigger: CCGCTGCCCTCCCCACAGCCACTCCGCAGCTCCAGC...GCAGGCTAGTGTGGCCGTCGAAAGCCTAGGTTCCAGAACTTTCCCTCTCTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CCA 90 bp CAGCTGAGGACATCTCATGTGCTCTGCCATGATGCCTCCATGAAGGCGGCCAGCCCGCCCGCAGCGAAGTaGTCTCGGTACCGGCCCATG +
Preference number: 4 (lower is better)
Translates to: QLRTSHVLCHDASMKAASPPAAK*SRYRPM
Trigger: CATGGGCCGGTACCGAGACCACTTCGCTGCGGGCGG...GCTGGCCGCCTTCATGGAGGCATCATGGCAGAGCACATGAGATGTCCTCAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CGCGGCACCTGGATGGGGCTGAGACTCCCCGAATTATTGCAGGAGGGAGAGGGGTCAGCTGGGCCCGCATaGTCTGAATGCTGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: RGTWMGLRLPELLQEGEGSAGPA*SECCPG
Trigger: TCCTGGGCAGCATTCAGACCATGCGGGCCCAGCTGA...CCCCTCTCCCTCCTGCAATAATTCGGGGAGTCTCAGCCCCATCCAGGTGCCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp AGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAAGAGCCTGGCTTGGTGGCTGCCTaGGCCCTGCTGGCTGTACAT +
Preference number: 4 (lower is better)
Translates to: RALPPPAPLWDGVWGQEPGLVAA*ALLAVH
Trigger: ATGTACAGCCAGCAGGGCCCAGGCAGCCACCAAGCC...AGGCTCTTGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GGCTTCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACATTCAGAAGTGGCCCCTaGCTCCAGCCTCCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: GFQGTSTPSALVGWCMGTFRSGP*LQPPGV
Trigger: CACACCTGGAGGCTGGAGCCAGGGGCCACTTCTGAA...TGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGAAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp CCCCTTCCCAGGCGCCTGACCCCTGATAACTCCAGGTCCTGTGGCGAAGCCTTCACACGGCATTGTAGGTaGTGTCACTGCGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: PLPRRLTPDNSRSCGEAFTRHCR*CHCGHL
Trigger: CAGGTGGCCGCAGTGACATCACCTACAATGCCGTGT...GAAGGCTTCGCCACAGGACCTGGAGTTATCAGGGGTCAGGCGCCTGGGAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp ACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGAGTGCCCCGCCCGCTCTTaGCGGATCACCACCACCTGG +
Preference number: 4 (lower is better)
Translates to: TLLQVPGPRCLHDCEDPECPARS*RITTTW
Trigger: CCAGGTGGTGGTGATCCGTCAAGAGCGGGCGGGGCA...CTCTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp CCCCTTCCCAGGCGCCTGACCCCTGATAACTCCAGGTCCTGTGGCGAAGCCTTCTCTCATACTCCAGGATaGTGCCGTTCGGCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: PLPRRLTPDNSRSCGEAFSHTPG*CRSAAR
Trigger: CCGAGCAGCCGAACGGCATCATCCTGGAGTATGAGA...GAAGGCTTCGCCACAGGACCTGGAGTTATCAGGGGTCAGGCGCCTGGGAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp CGCGGCACCTGGATGGGGCTGAGACTCCCCGAATTATTGCAGGAGGGAGAGGGGACAGAGGCAGGCGAGTaGTGTCCCTGTTGGACTCTG +
Preference number: 4 (lower is better)
Translates to: RGTWMGLRLPELLQEGEGTEAGE*CPCWTL
Trigger: CAGAGTCCAACAGGGACATCACTCGCCTGCCTCTGT...CCCCTCTCCCTCCTGCAATAATTCGGGGAGTCTCAGCCCCATCCAGGTGCCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp GCACACAGAGGCAGGCGAGTGATGTCCCTGTTGGACTCTGTGACGTGGAGGCCCCTGGCGGTGTCACACTaGGTTCCCTGCTCACACACC +
Preference number: 4 (lower is better)
Translates to: AHRGRRVMSLLDSVTWRPLAVSH*VPCSHT
Trigger: GGTGTGTGAGCAGGGAACTCAGTGTGACACCGCCAG...GGGCCTCCACGTCACAGAGTCCAACAGGGACATCACTCGCCTGCCTCTGTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp GGCTTCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAAGATCCCCAGGACCCTaGGAGGGACCACACACTAGA +
Preference number: 4 (lower is better)
Translates to: GFQGTSTPSALVGWCMGTRSPGP*EGPHTR
Trigger: TCTAGTGTGTGGTCCCTCTCAGGGTCCTGGGGATCT...TGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGAAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp GCACACAGAGGCAGGCGAGTGATGTCCCTGTTGGACTCTGTGACGTGGAGGCCCAGGTCTCCTTGCAGGTaGCCAGCACACCAGGCATGC +
Preference number: 4 (lower is better)
Translates to: AHRGRRVMSLLDSVTWRPRSPCR*PAHQAC
Trigger: GCATGCCTGGTGTGCTGGGCACCTGCAAGGAGACCT...GGGCCTCCACGTCACAGAGTCCAACAGGGACATCACTCGCCTGCCTCTGTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp CCCCCACCACACACACACATGCACGCACACAGAGGCAGGCGAGTGATGTCCCTGTGCACCAGGCTTGTCTaGTGGGGCACAAAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: PPPHTHMHAHRGRRVMSLCTRLV*WGTKRV
Trigger: CACCCGCTTTGTGCCCCAGCAGACAAGCCTGGTGCA...CAGGGACATCACTCGCCTGCCTCTGTGTGCGTGCATGTGTGTGTGTGGTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp GCACACAGAGGCAGGCGAGTGATGTCCCTGTTGGACTCTGTGACGTGGAGGCCCTGCGCCCGGTCCTTGTaGCAACAGTCGAGCATGAGC +
Preference number: 4 (lower is better)
Translates to: AHRGRRVMSLLDSVTWRPCARSL*QQSSMS
Trigger: GCTCATGCTCGACTGTTGGCACAAGGACCGGGCGCA...GGGCCTCCACGTCACAGAGTCCAACAGGGACATCACTCGCCTGCCTCTGTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp CCCCCACCACACACACACATGCACGCACACAGAGGCAGGCGAGTGATGTCCCTGCGTCCTGGGCGTTCATaGGTAGCACCATGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: PPPHTHMHAHRGRRVMSLRPGRS*VAPCPE
Trigger: CTCTGGGCATGGTGCTACGCATGAACGCCCAGGACG...CAGGGACATCACTCGCCTGCCTCTGTGTGCGTGCATGTGTGTGTGTGGTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp CCCCCACCACACACACACATGCACGCACACAGAGGCAGGCGAGTGATGTCCCTGGTGCCAGGCCCACGGTaGCTCCATGACTGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: PPPHTHMHAHRGRRVMSLVPGPR*LHDCED
Trigger: ATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCAC...CAGGGACATCACTCGCCTGCCTCTGTGTGCGTGCATGTGTGTGTGTGGTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GCTCACCCAGGCAGAGACGAGGGTGGGCCTGGTGCTGGTGCAGTTCAGAAGTGGTACGTGTGGATGGGCTaGAAGGACTCGTCCACCTCG +
Preference number: 4 (lower is better)
Translates to: AHPGRDEGGPGAGAVQKWYVWMG*KDSSTS
Trigger: CGAGGTGGACGAGTCCTTCCAGCCCATCCACACGTA...CCACTTCTGAACTGCACCAGCACCAGGCCCACCCTCGTCTCTGCCTGGGTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CGCCCTTGTGGGATGGTGTATGGGGACAAGAGCCTTGGCAGGAGGCCGGAGCCCCAAACCTGGTACGTGTaGATGGGCTGGAAGGACTCG +
Preference number: 4 (lower is better)
Translates to: RPCGMVYGDKSLGRRPEPQTWYV*MGWKDS
Trigger: CGAGTCCTTCCAGCCCATCCACACGTACCAGGTTTG...GGGCTCCGGCCTCCTGCCAAGGCTCTTGTCCCCATACACCATCCCACAAGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GTGAGCCTCTCCCCCGCCCCCATGGGTGCTGGACCTGGCGGTGTCACACTGAGTATGACGTTGCAAACCTaGTACGTGTGGATGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VSLSPAPMGAGPGGVTLSMTLQT*YVWMGW
Trigger: CCAGCCCATCCACACGTACCAGGTTTGCAACGTCAT...ACTCAGTGTGACACCGCCAGGTCCAGCACCCATGGGGGCGGGGGAGAGGCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CAGGTGTCCTCACCAGGGTGGCCACCAAAGGCCCCTTCCCAGGCGCCTGACCCCCCAGATTGCGCACCATaGCAGGGCACTTCTTATAGT +
Preference number: 4 (lower is better)
Translates to: QVSSPGWPPKAPSQAPDPPDCAP*QGTSYS
Trigger: ACTATAAGAAGTGCCCTGCCATGGTGCGCAATCTGG...GGGGTCAGGCGCCTGGGAAGGGGCCTTTGGTGGCCACCCTGGTGAGGACACCTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CAGCTGAGGACATCTCATGTGCTCTGCCATGATGCCTCCATGAAGGCGGCCAGCGAGTGCCGCACGCACTaGCCCCTCACCTCCACCAGT +
Preference number: 4 (lower is better)
Translates to: QLRTSHVLCHDASMKAASECRTH*PLTSTS
Trigger: ACTGGTGGAGGTGAGGGGCCAGTGCGTGCGGCACTC...GCTGGCCGCCTTCATGGAGGCATCATGGCAGAGCACATGAGATGTCCTCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GCTTCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAATGGGACGGGGCTGCCTaGTTCGTGGTGATGTTGACC +
Preference number: 4 (lower is better)
Translates to: ASRALPPPAPLWDGVWGQWDGAA*FVVMLT
Trigger: GGTCAACATCACCACGAACCAGGCAGCCCCGTCCCA...TTGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp ACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGAGAGGTGCGGAAGGCGATaGCCTCTGGGGCCGTCCAGC +
Preference number: 4 (lower is better)
Translates to: TLLQVPGPRCLHDCEDPERCGRR*PLGPSS
Trigger: GCTGGACGGCCCCAGAGGCCATCGCCTTCCGCACCT...CTCTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CAGCTGAGGACATCTCATGTGCTCTGCCATGATGCCTCCATGAAGGCGGCCAGCTCCAGCCTCCAGGTGTaGGGGGACGTAGGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: QLRTSHVLCHDASMKAASSSLQV*GDVGVS
Trigger: GCTCACCCCTACGTCCCCCCACACCTGGAGGCTGGA...GCTGGCCGCCTTCATGGAGGCATCATGGCAGAGCACATGAGATGTCCTCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GTGAGCCTCTCCCCCGCCCCCATGGGTGCTGGACCTGGCGGTGTCACACTGAGTGAAGATAGGATCCTCTaGTCCCTGATCCTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: VSLSPAPMGAGPGGVTLSEDRIL*SLILGL
Trigger: CAGGCCTAGGATCAGGGACCAGAGGATCCTATCTTC...ACTCAGTGTGACACCGCCAGGTCCAGCACCCATGGGGGCGGGGGAGAGGCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CAGCTGAGGACATCTCATGTGCTCTGCCATGATGCCTCCATGAAGGCGGCCAGCGAGGGGGCTCAGTGCTaGTGTCCCCGCGGGATAGCT +
Preference number: 4 (lower is better)
Translates to: QLRTSHVLCHDASMKAASEGAQC*CPRGIA
Trigger: AGCTATCCCGCGGGGACACCAGCACTGAGCCCCCTC...GCTGGCCGCCTTCATGGAGGCATCATGGCAGAGCACATGAGATGTCCTCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp GCACAGAGAGGGAAAGTTCTGGAACCTAGGCTTTCGACGGCCACACTAGCCTGCCATGAGCCGGATACGTaGGCCAGCCCCAGTCCCCGT +
Preference number: 4 (lower is better)
Translates to: AQRGKVLEPRLSTATLACHEPDT*ASPSPR
Trigger: ACGGGGACTGGGGCTGGCTCACGTATCCGGCTCATG...GCAGGCTAGTGTGGCCGTCGAAAGCCTAGGTTCCAGAACTTTCCCTCTCTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR TCA 90 bp CCCCCACCACACACACACATGCACGCACACAGAGGCAGGCGAGTGATGTCCCTGCTGCACGGTAGTAGCTaGGGTCACAGTGGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: PPPHTHMHAHRGRRVMSLLHGSS*GHSGRL
Trigger: AAGCCTGCCACTGTGACCTCAGCTACTACCGTGCAG...CAGGGACATCACTCGCCTGCCTCTGTGTGCGTGCATGTGTGTGTGTGGTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp CCACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGGGTCGGACACGCCATTaGCGGCCTCGATCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: PHFCKCQAHGASMTVRIQGRTRH*RPRSRR
Trigger: CCTTCTGGATCGAGGCCGTCAATGGCGTGTCCGACC...CTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp AGGCGCCTGACCCCTGATAACTCCAGGTCCTGTGGCGAAGCCTTCAGCTCCTCCTCATGTGCTCTGCCATaGTGCCTCCATGAAGGCGGC +
Preference number: 4 (lower is better)
Translates to: RRLTPDNSRSCGEAFSSSSCALP*CLHEGG
Trigger: GCCGCCTTCATGGAGGCATCATGGCAGAGCACATGA...GGAGGAGCTGAAGGCTTCGCCACAGGACCTGGAGTTATCAGGGGTCAGGCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp GCACACAGAGGCAGGCGAGTGATGTCCCTGTTGGACTCTGTGACGTGGAGGCCCGCACCTGGATGGGGCTaGGACTCCCCGAATTATTGC +
Preference number: 4 (lower is better)
Translates to: AHRGRRVMSLLDSVTWRPAPGWG*DSPNYC
Trigger: GCAATAATTCGGGGAGTCTCAGCCCCATCCAGGTGC...GGGCCTCCACGTCACAGAGTCCAACAGGGACATCACTCGCCTGCCTCTGTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp GTGAGCCTCTCCCCCGCCCCCATGGGTGCTGGACCTGGCGGTGTCACACTGAGTGCATGGTCTGAATGCTaGCCAGGATCTTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: VSLSPAPMGAGPGGVTLSAWSEC*PGSSSG
Trigger: ACCAGAAGAAGATCCTGGGCAGCATTCAGACCATGC...ACTCAGTGTGACACCGCCAGGTCCAGCACCCATGGGGGCGGGGGAGAGGCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp GCTCACCCAGGCAGAGACGAGGGTGGGCCTGGTGCTGGTGCAGTTCAGAAGTGGACTCTGACACTTGGTTaGAGTGCAACCTGGGACGGG +
Preference number: 4 (lower is better)
Translates to: AHPGRDEGGPGAGAVQKWTLTLG*SATWDG
Trigger: CCCGTCCCAGGTTGCACTGCAACCAAGTGTCAGAGT...CCACTTCTGAACTGCACCAGCACCAGGCCCACCCTCGTCTCTGCCTGGGTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp CCCCCACCACACACACACATGCACGCACACAGAGGCAGGCGAGTGATGTCCCTGGACTCCCCGAATTATTaGAGGAGGGAGAGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PPPHTHMHAHRGRRVMSLDSPNY*RRERGL
Trigger: GAGCCCCCTCTCCCTCCTGCAATAATTCGGGGAGTC...CAGGGACATCACTCGCCTGCCTCTGTGTGCGTGCATGTGTGTGTGTGGTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp TCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAAGAGCCCAGTCCCCGTGGATaGTCGACGTGTCCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: SRALPPPAPLWDGVWGQEPSPRG*STCPAN
Trigger: ATTTGCTGGACACGTCGACCATCCACGGGGACTGGG...CTCTTGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GCACAGAGAGGGAAAGTTCTGGAACCTAGGCTTTCGACGGCCACACTAGCCTGCGAGTGCCGCACGCACTaGCCCCTCACCTCCACCAGT +
Preference number: 4 (lower is better)
Translates to: AQRGKVLEPRLSTATLACECRTH*PLTSTS
Trigger: ACTGGTGGAGGTGAGGGGCCAGTGCGTGCGGCACTC...GCAGGCTAGTGTGGCCGTCGAAAGCCTAGGTTCCAGAACTTTCCCTCTCTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CCA 90 bp GCACACAGAGGCAGGCGAGTGATGTCCCTGTTGGACTCTGTGACGTGGAGGCCCCGCTGCAGTACATCTTaGGTGTGTCCCGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: AHRGRRVMSLLDSVTWRPRCSTS*VCPAPL
Trigger: CAGAGGAGCGGGACACACCCAAGATGTACTGCAGCG...GGGCCTCCACGTCACAGAGTCCAACAGGGACATCACTCGCCTGCCTCTGTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GTGCCTCCAGCCTTAACGGATAAGCACACGCTCATAACATGCACACGTCCATGCGCTGGAGCTGCGGAGTaGCTGTGGGGAGGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: VPPALTDKHTLITCTRPCAGAAE*LWGGQR
Trigger: CCGCTGCCCTCCCCACAGCCACTCCGCAGCTCCAGC...GCATGGACGTGTGCATGTTATGAGCGTGTGCTTATCCGTTAAGGCTGGAGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CAGCTGAGGACATCTCATGTGCTCTGCCATGATGCCTCCATGAAGGCGGCCAGCTCTTCCCGCCCGTGGTaGTGTAGGCAGCATCCGGGT +
Preference number: 4 (lower is better)
Translates to: QLRTSHVLCHDASMKAASSSRPW*CRQHPG
Trigger: ACCCGGATGCTGCCTACACCACCACGGGCGGGAAGA...GCTGGCCGCCTTCATGGAGGCATCATGGCAGAGCACATGAGATGTCCTCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GCACACAGAGGCAGGCGAGTGATGTCCCTGTTGGACTCTGTGACGTGGAGGCCCAGGACACTGACAATCTaGGAGAAGCGAGGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: AHRGRRVMSLLDSVTWRPRTLTI*EKRGRC
Trigger: GCAGCGGCCTCGCTTCTCCCAGATTGTCAGTGTCCT...GGGCCTCCACGTCACAGAGTCCAACAGGGACATCACTCGCCTGCCTCTGTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp ACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGAGCGCCCCCATGGGTGCTaGACCTGGCGGTGTCACACT +
Preference number: 4 (lower is better)
Translates to: TLLQVPGPRCLHDCEDPERPHGC*TWRCHT
Trigger: AGTGTGACACCGCCAGGTCCAGCACCCATGGGGGCG...CTCTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CAGCTGAGGACATCTCATGTGCTCTGCCATGATGCCTCCATGAAGGCGGCCAGCGGGTGGGCCTGGTGCTaGTGCAGTTCAGAAGTGGCC +
Preference number: 4 (lower is better)
Translates to: QLRTSHVLCHDASMKAASGWAWC*CSSEVA
Trigger: GGCCACTTCTGAACTGCACCAGCACCAGGCCCACCC...GCTGGCCGCCTTCATGGAGGCATCATGGCAGAGCACATGAGATGTCCTCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CAGCTGAGGACATCTCATGTGCTCTGCCATGATGCCTCCATGAAGGCGGCCAGCGAGATACAGCCGGGGTaGGCTCACCCAGGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: QLRTSHVLCHDASMKAASEIQPG*AHPGRD
Trigger: GTCTCTGCCTGGGTGAGCCCACCCCGGCTGTATCTC...GCTGGCCGCCTTCATGGAGGCATCATGGCAGAGCACATGAGATGTCCTCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp AGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAAGAGCCTTTGAGTGAGGAGACCTaGGCCGTGGAGGGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: RALPPPAPLWDGVWGQEPLSEET*AVEGRH
Trigger: ATGCCTTCCCTCCACGGCCCAGGTCTCCTCACTCAA...AGGCTCTTGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp TCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAAGAGGGCAGGTGTCAGGGCTaGGCATTGAAAGGTTGGCGA +
Preference number: 4 (lower is better)
Translates to: SRALPPPAPLWDGVWGQEGRCQG*ALKGWR
Trigger: TCGCCAACCTTTCAATGCCCAGCCCTGACACCTGCC...CTCTTGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CAGCCCCTCACGTCCTCTGCCGCTGGCATGACCTGGGGTGGGCTTGGTGGCTGCGGGGCTTTCTCACCCTaGGTGCTTTTTATGTGCTTT +
Preference number: 4 (lower is better)
Translates to: QPLTSSAAGMTWGGLGGCGAFSP*VLFMCF
Trigger: AAAGCACATAAAAAGCACCCAGGGTGAGAAAGCCCC...GCAGCCACCAAGCCCACCCCAGGTCATGCCAGCGGCAGAGGACGTGAGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GTGCCTCCAGCCTTAACGGATAAGCACACGCTCATAACATGCACACGTCCATGCGCTGGCCGCGGCACCTaGATGGGGCTGAGACTCCCC +
Preference number: 4 (lower is better)
Translates to: VPPALTDKHTLITCTRPCAGRGT*MGLRLP
Trigger: GGGGAGTCTCAGCCCCATCCAGGTGCCGCGGCCAGC...GCATGGACGTGTGCATGTTATGAGCGTGTGCTTATCCGTTAAGGCTGGAGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
3UTR CAA 72 bp ATGCACGCACACAGAGGCAGGCGAGTGATGTCCCTGTaGGACTCTGTGACGTGGAGGCCCCAGGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: MHAHRGRRVMSL*DSVTWRPQALE
Trigger: TTCCAGAGCCTGGGGCCTCCACGTCACAGAGTCCAACAGGGACATCACTCGCCTGCCTCTGTGTGCGTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp GCACAGAGAGGGAAAGTTCTGGAACCTAGGCTTTCGACGGCCACACTAGCCTGCGGTCGGACACGCCATTaGCGGCCTCGATCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: AQRGKVLEPRLSTATLACGRTRH*RPRSRR
Trigger: CCTTCTGGATCGAGGCCGTCAATGGCGTGTCCGACC...GCAGGCTAGTGTGGCCGTCGAAAGCCTAGGTTCCAGAACTTTCCCTCTCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR TCA 90 bp GCACACAGAGGCAGGCGAGTGATGTCCCTGTTGGACTCTGTGACGTGGAGGCCCGCCTCTTCTTGCAGATaGGCAGGAGCAGAAGCACCA +
Preference number: 4 (lower is better)
Translates to: AHRGRRVMSLLDSVTWRPASSCR*AGAEAP
Trigger: TGGTGCTTCTGCTCCTGCTCATCTGCAAGAAGAGGC...GGGCCTCCACGTCACAGAGTCCAACAGGGACATCACTCGCCTGCCTCTGTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp ACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGAGGTCCTCCAGCACCCGTaGGAGCCCGAAGTCAGACAC +
Preference number: 4 (lower is better)
Translates to: TLLQVPGPRCLHDCEDPEVLQHP*EPEVRH
Trigger: GTGTCTGACTTCGGGCTCTCACGGGTGCTGGAGGAC...CTCTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp CAGCTGAGGACATCTCATGTGCTCTGCCATGATGCCTCCATGAAGGCGGCCAGCTGGGCCCGCATGGTCTaGATGCTGCCCAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: QLRTSHVLCHDASMKAASWARMV*MLPRIF
Trigger: GAAGATCCTGGGCAGCATTCAGACCATGCGGGCCCA...GCTGGCCGCCTTCATGGAGGCATCATGGCAGAGCACATGAGATGTCCTCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp CAGCTGAGGACATCTCATGTGCTCTGCCATGATGCCTCCATGAAGGCGGCCAGCTGCACACGTCCATGCTaGGACCCGAAGGGGTGGACA +
Preference number: 4 (lower is better)
Translates to: QLRTSHVLCHDASMKAASCTRPC*DPKGWT
Trigger: TGTCCACCCCTTCGGGTCTCAGCATGGACGTGTGCA...GCTGGCCGCCTTCATGGAGGCATCATGGCAGAGCACATGAGATGTCCTCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp GCACAGAGAGGGAAAGTTCTGGAACCTAGGCTTTCGACGGCCACACTAGCCTGCTCCCCGGCAGAGCTCTaGTCCCTGGATGGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: AQRGKVLEPRLSTATLACSPAEL*SLDGSE
Trigger: CTCAGACCCATCCAGGGATCAGAGCTCTGCCGGGGA...GCAGGCTAGTGTGGCCGTCGAAAGCCTAGGTTCCAGAACTTTCCCTCTCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR GCA 90 bp AGCCTCCTGAGAGGACCTCAGGCAGGTACTATTATTCCCATTGCACCAGGGAGGCGGCGGGTCCAGGGCTaGACGGTAGTAGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: SLLRGPQAGTIIPIAPGRRRVQG*TVVAEV
Trigger: GACCTCAGCTACTACCGTGCAGCCCTGGACCCGCCG...CCTCCCTGGTGCAATGGGAATAATAGTACCTGCCTGAGGTCCTCTCAGGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR GCA 90 bp GCACAGAGAGGGAAAGTTCTGGAACCTAGGCTTTCGACGGCCACACTAGCCTGCACCAGCAGGCTGGCCTaGACCAGGCTTGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: AQRGKVLEPRLSTATLACTSRLA*TRLVCW
Trigger: CCAGCAGACAAGCCTGGTGCAGGCCAGCCTGCTGGT...GCAGGCTAGTGTGGCCGTCGAAAGCCTAGGTTCCAGAACTTTCCCTCTCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR GCA 90 bp GCTCACCCAGGCAGAGACGAGGGTGGGCCTGGTGCTGGTGCAGTTCAGAAGTGGGAAGACAGGTGGGGGTaGCTGTCCATTCTGATAGTG +
Preference number: 4 (lower is better)
Translates to: AHPGRDEGGPGAGAVQKWEDRWG*LSILIV
Trigger: CACTATCAGAATGGACAGGCACCCCCACCTGTCTTC...CCACTTCTGAACTGCACCAGCACCAGGCCCACCCTCGTCTCTGCCTGGGTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp CAGCTGAGGACATCTCATGTGCTCTGCCATGATGCCTCCATGAAGGCGGCCAGCCGAGGGTGGGCCTGGTaGTGGTGCAGTTCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: QLRTSHVLCHDASMKAASRGWAW*WCSSEV
Trigger: CACTTCTGAACTGCACCAGCACCAGGCCCACCCTCG...GCTGGCCGCCTTCATGGAGGCATCATGGCAGAGCACATGAGATGTCCTCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GGAGAGGGGGCTCAGTGCTGGTGTCCCCGCGGGATAGCTGTGCTGGCTATGGGGATGTCCCATTCACACTaGAGATCAGGTTCACTGGTG +
Preference number: 4 (lower is better)
Translates to: GEGAQCWCPRGIAVLAMGMSHSH*RSGSLV
Trigger: CACCAGTGAACCTGATCTCCAGTGTGAATGGGACAT...CCCCATAGCCAGCACAGCTATCCCGCGGGGACACCAGCACTGAGCCCCCTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp ACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGAGTGGCCACCAGCAGGCTaGCCTGCACCAGGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: TLLQVPGPRCLHDCEDPEWPPAG*PAPGLS
Trigger: AGACAAGCCTGGTGCAGGCCAGCCTGCTGGTGGCCA...CTCTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CCACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGTCCAGACAATGGTCCTaGTGTCATAGCGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PHFCKCQAHGASMTVRIQSRQWS*CHSGAG
Trigger: CCCGGCCCCGCTATGACACCAGGACCATTGTCTGGA...CTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CCACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGGTGAACTGCCCGTCGTaGGTCCTCAGGAAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: PHFCKCQAHGASMTVRIQVNCPS*VLRKVS
Trigger: GGACACCTTCCTGAGGACCCACGACGGGCAGTTCAC...CTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp ACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGAGAGAAGGTGCCTGCCCTaGGGGACAGGTGTCCTCACC +
Preference number: 4 (lower is better)
Translates to: TLLQVPGPRCLHDCEDPERRCLP*GTGVLT
Trigger: GGTGAGGACACCTGTCCCCCAGGGCAGGCACCTTCT...CTCTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp TCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAAGAGCCAGAGCCCAGAAATTaGGTAAGAGTGGGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: SRALPPPAPLWDGVWGQEPEPRN*VRVGWG
Trigger: ACCCCACCCCACTCTTACCCAATTTCTGGGCTCTGG...CTCTTGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp AGCCTCCTGAGAGGACCTCAGGCAGGTACTATTATTCCCATTGCACCAGGGAGGCAAGGTCGGCACCTGTaGAGCTCTCGTCGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: SLLRGPQAGTIIPIAPGRQGRHL*SSRRPQ
Trigger: TTGCGGCCGACGAGAGCTTCACAGGTGCCGACCTTG...CCTCCCTGGTGCAATGGGAATAATAGTACCTGCCTGAGGTCCTCTCAGGAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR TCA 90 bp GTGCCTCCAGCCTTAACGGATAAGCACACGCTCATAACATGCACACGTCCATGCAGAAGCCGCGCTTGCTaGGGGGACCCACACTGCGCA +
Preference number: 4 (lower is better)
Translates to: VPPALTDKHTLITCTRPCRSRAC*GDPHCA
Trigger: TGCGCAGTGTGGGTCCCCTCAGCAAGCGCGGCTTCT...GCATGGACGTGTGCATGTTATGAGCGTGTGCTTATCCGTTAAGGCTGGAGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp CTCCTGAGAGGACCTCAGGCAGGTACTATTATTCCCATTGCACCAGGGAGGAAACCTCACCTCCACCAGTaGGGACGAGTCGGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: LLRGPQAGTIIPIAPGRKPHLHQ*GRVGPR
Trigger: ACGGGGGCCGACTCGTCCTCACTGGTGGAGGTGAGG...TTTCCTCCCTGGTGCAATGGGAATAATAGTACCTGCCTGAGGTCCTCTCAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR TCA 90 bp CAGCTGAGGACATCTCATGTGCTCTGCCATGATGCCTCCATGAAGGCGGCCAGCGCGCATCGAGGACACTaGCAATCTGGGAGAAGCGAG +
Preference number: 4 (lower is better)
Translates to: QLRTSHVLCHDASMKAASAHRGH*QSGRSE
Trigger: CTCGCTTCTCCCAGATTGTCAGTGTCCTCGATGCGC...GCTGGCCGCCTTCATGGAGGCATCATGGCAGAGCACATGAGATGTCCTCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp GCTCACCCAGGCAGAGACGAGGGTGGGCCTGGTGCTGGTGCAGTTCAGAAGTGGAGGGGTGGACACACTTaGTCACACACTGTTCACATG +
Preference number: 4 (lower is better)
Translates to: AHPGRDEGGPGAGAVQKWRGGHT*SHTVHM
Trigger: CATGTGAACAGTGTGTGATCAAGTGTGTCCACCCCT...CCACTTCTGAACTGCACCAGCACCAGGCCCACCCTCGTCTCTGCCTGGGTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp CGCCCTTGTGGGATGGTGTATGGGGACAAGAGCCTTGGCAGGAGGCCGGAGCCCACACCTCCTCATTCATaGCACATCATCCACCATCAC +
Preference number: 4 (lower is better)
Translates to: RPCGMVYGDKSLGRRPEPTPPHS*HIIHHH
Trigger: GTGATGGTGGATGATGTGTCATGAATGAGGAGGTGT...GGGCTCCGGCCTCCTGCCAAGGCTCTTGTCCCCATACACCATCCCACAAGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp ACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGAGTTGGCGAAGGGACTTTaGGTGAGGAGACCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: TLLQVPGPRCLHDCEDPELAKGL*VRRPGP
Trigger: CGGCCCAGGTCTCCTCACTCAAAGTCCCTTCGCCAA...CTCTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp AGGCGCCTGACCCCTGATAACTCCAGGTCCTGTGGCGAAGCCTTCAGCTCCTCCGACCACACACTAGAGTaGGGGGCCACACTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: RRLTPDNSRSCGEAFSSSDHTLE*GATLLQ
Trigger: TTGCAAAAGTGTGGCCCCTCACTCTAGTGTGTGGTC...GGAGGAGCTGAAGGCTTCGCCACAGGACCTGGAGTTATCAGGGGTCAGGCGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp CTCCTGAGAGGACCTCAGGCAGGTACTATTATTCCCATTGCACCAGGGAGGAAAGTCGGCCCCCGTCACTaGCTCCGAGAAGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LLRGPQAGTIIPIAPGRKVGPRH*LREGSQ
Trigger: CTGGCTGCCTTCTCGGAGGCAGTGACGGGGGCCGAC...TTTCCTCCCTGGTGCAATGGGAATAATAGTACCTGCCTGAGGTCCTCTCAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CCA 90 bp AGCCTCCTGAGAGGACCTCAGGCAGGTACTATTATTCCCATTGCACCAGGGAGGTGGCCACCAGCAGGCTaGCCTGCACCAGGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: SLLRGPQAGTIIPIAPGRWPPAG*PAPGLS
Trigger: AGACAAGCCTGGTGCAGGCCAGCCTGCTGGTGGCCA...CCTCCCTGGTGCAATGGGAATAATAGTACCTGCCTGAGGTCCTCTCAGGAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CCA 90 bp CCACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGTTGGACTCTGTGACGTaGAGGCCCCAGGCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: PHFCKCQAHGASMTVRIQLDSVT*RPQALE
Trigger: TTCCAGAGCCTGGGGCCTCCACGTCACAGAGTCCAA...CTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CCACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGAGACGAGGGTGGGCCTaGTGCTGGTGCAGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: PHFCKCQAHGASMTVRIQRRGWA*CWCSSE
Trigger: TTCTGAACTGCACCAGCACCAGGCCCACCCTCGTCT...CTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp CCACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGTCTGGTTGGGGCTCATaGCGTTGCAAACCTGGTACG +
Preference number: 4 (lower is better)
Translates to: PHFCKCQAHGASMTVRIQSGWGS*RCKPGT
Trigger: CGTACCAGGTTTGCAACGTCATGAGCCCCAACCAGA...CTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp AGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAAGAGCCTAGTCTCCAGAGCCGATaGTTTTCTCGATGTGGATCC +
Preference number: 4 (lower is better)
Translates to: RALPPPAPLWDGVWGQEPSLQSR*FSRCGS
Trigger: GGATCCACATCGAGAAAATCATCGGCTCTGGAGACT...AGGCTCTTGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp ACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGAGCACTGCACACGCATTTaGCGATGGGCACGAGCCACT +
Preference number: 4 (lower is better)
Translates to: TLLQVPGPRCLHDCEDPEHCTRI*RWARAT
Trigger: AGTGGCTCGTGCCCATCGGCAAATGCGTGTGCAGTG...CTCTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp CCACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGAGTCCTGGAAGGCCTTaGTGTAGCCACAGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: PHFCKCQAHGASMTVRIQSPGRP*CSHSAS
Trigger: AGAGGCACTGTGGCTACAGCAAGGCCTTCCAGGACT...CTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp GCTCACCCAGGCAGAGACGAGGGTGGGCCTGGTGCTGGTGCAGTTCAGAAGTGGCAATGGTGTCGATTTTaGGGAACTGGCTTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: AHPGRDEGGPGAGAVQKWQWCRF*GTGFLV
Trigger: CACAAGAAAGCCAGTTCCTCAAAATCGACACCATTG...CCACTTCTGAACTGCACCAGCACCAGGCCCACCCTCGTCTCTGCCTGGGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp ATTTCATTCCTCTCATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTATTGGCCGGGTGCAGGCTaGGGACGGCGGGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: ISFLSFKPPERTSGRYYYWPGAG*GRRVQG
Trigger: GCCCTGGACCCGCCGTCCTCAGCCTGCACCCGGCCA...ATAATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATGAGAGGAATGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR TCA 90 bp CAGCTGAGGACATCTCATGTGCTCTGCCATGATGCCTCCATGAAGGCGGCCAGCCCACTCCAGAGTCACTaGTGTCCCATTCACACTGGA +
Preference number: 4 (lower is better)
Translates to: QLRTSHVLCHDASMKAASPLQSH*CPIHTG
Trigger: TCCAGTGTGAATGGGACATCAGTGACTCTGGAGTGG...GCTGGCCGCCTTCATGGAGGCATCATGGCAGAGCACATGAGATGTCCTCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp CCACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGTCACATGAGATCCCATaGCCTTGTGAGAACACCCCC +
Preference number: 4 (lower is better)
Translates to: PHFCKCQAHGASMTVRIQSHEIP*PCENTP
Trigger: GGGGGTGTTCTCACAAGGTCATGGGATCTCATGTGA...CTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp CAGCTGAGGACATCTCATGTGCTCTGCCATGATGCCTCCATGAAGGCGGCCAGCCCCCAGATCGTGTTCTaGCCATGTTTCCGACTTCCA +
Preference number: 4 (lower is better)
Translates to: QLRTSHVLCHDASMKAASPQIVF*PCFRLP
Trigger: TGGAAGTCGGAAACATGGTCAGAACACGATCTGGGG...GCTGGCCGCCTTCATGGAGGCATCATGGCAGAGCACATGAGATGTCCTCAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp CAATTTCATTCCTCTCATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTCTCGCAGCGGCTCAGTaGCCAGGGGCAGCGGCGGCA +
Preference number: 4 (lower is better)
Translates to: QFHSSHLSLLRGPQAGTILAAAQ*PGAAAA
Trigger: TGCCGCCGCTGCCCCTGGGCACTGAGCCGCTGCGAG...AATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATGAGAGGAATGAAATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR GCA 90 bp CATTTACCACGGGCCAGGTGCTGGGCTAAGCAATTTCATTCCTCTCATTTAAGCGGTGCCGCTCCCACATaGCTCGCAGCGGCTCAGTGC +
Preference number: 4 (lower is better)
Translates to: HLPRARCWAKQFHSSHLSGAAPT*LAAAQC
Trigger: GCACTGAGCCGCTGCGAGGCATGTGGGAGCGGCACC...GCTTAAATGAGAGGAATGAAATTGCTTAGCCCAGCACCTGGCCCGTGGTAAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR GCA 90 bp GTGCCTCCAGCCTTAACGGATAAGCACACGCTCATAACATGCACACGTCCATGCCACCTGGGACGGGGCTaGCTGGTTCGTGGTGATGTT +
Preference number: 4 (lower is better)
Translates to: VPPALTDKHTLITCTRPCHLGRG*LVRGDV
Trigger: AACATCACCACGAACCAGGCAGCCCCGTCCCAGGTG...GCATGGACGTGTGCATGTTATGAGCGTGTGCTTATCCGTTAAGGCTGGAGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp GTGCCTCCAGCCTTAACGGATAAGCACACGCTCATAACATGCACACGTCCATGCCCACACTTTTGCAAGTaGCAGGCCCACGGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: VPPALTDKHTLITCTRPCPHFCK*QAHGAS
Trigger: GGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGTGG...GCATGGACGTGTGCATGTTATGAGCGTGTGCTTATCCGTTAAGGCTGGAGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTATTCCCATTGCACCAGCAGGCTTGGGCGGCTaGAGCTGCGGAGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: HLSLLRGPQAGTIIPIAPAGLGG*SCGVAV
Trigger: CACAGCCACTCCGCAGCTCCAGCCGCCCAAGCCTGC...TGGTGCAATGGGAATAATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CCA 90 bp ACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGAGGGCAGATCCAGACAATaGTCCTGGTGTCATAGCGGG +
Preference number: 4 (lower is better)
Translates to: TLLQVPGPRCLHDCEDPEGRSRQ*SWCHSG
Trigger: CCCGCTATGACACCAGGACCATTGTCTGGATCTGCC...CTCTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GCACAGAGAGGGAAAGTTCTGGAACCTAGGCTTTCGACGGCCACACTAGCCTGCCCACGGGCCAGGTGCTaGGCTAAGCAATTTCATTCC +
Preference number: 4 (lower is better)
Translates to: AQRGKVLEPRLSTATLACPRARC*AKQFHS
Trigger: GGAATGAAATTGCTTAGCCCAGCACCTGGCCCGTGG...GCAGGCTAGTGTGGCCGTCGAAAGCCTAGGTTCCAGAACTTTCCCTCTCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR GCA 90 bp GCCAGGTGCTGGGCTAAGCAATTTCATTCCTCTCATTTAAGCCTCCTGAGAGGAGGGGGACCCAGCTCGTaGGCAGCCAGTTGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: ARCWAKQFHSSHLSLLRGGGPSS*AASCSG
Trigger: ACCAGAACAACTGGCTGCGCACGAGCTGGGTCCCCC...TCCTCTCAGGAGGCTTAAATGAGAGGAATGAAATTGCTTAGCCCAGCACCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR GCA 90 bp GCTTCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAAACTTCTTATAGTAGATaGGGAGAGAGAGGATGGCCA +
Preference number: 4 (lower is better)
Translates to: ASRALPPPAPLWDGVWGQTSYSR*GERGWP
Trigger: TGGCCATCCTCTCTCTCCGCATCTACTATAAGAAGT...TTGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp GTGCCTCCAGCCTTAACGGATAAGCACACGCTCATAACATGCACACGTCCATGCACTCGCCCTCCGCGCTaGAGTACATCTTGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: VPPALTDKHTLITCTRPCTRPPR*STSWVC
Trigger: ACACACCCAAGATGTACTGCAGCGCGGAGGGCGAGT...GCATGGACGTGTGCATGTTATGAGCGTGTGCTTATCCGTTAAGGCTGGAGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp CCTGAGAGGACCTCAGGCAGGTACTATTATTCCCATTGCACCAGGGAGGAAACTTGCACCAGGCTTGTCTaGTGGGGCACAAAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: PERTSGRYYYSHCTREETCTRLV*WGTKRV
Trigger: CACCCGCTTTGTGCCCCAGCAGACAAGCCTGGTGCA...AGTTTCCTCCCTGGTGCAATGGGAATAATAGTACCTGCCTGAGGTCCTCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR GCA 90 bp GGAGAGGGGGCTCAGTGCTGGTGTCCCCGCGGGATAGCTGTGCTGGCTATGGGGTGGGTGCTTTTTATGTaGTTTGAAGACCATTTTTGC +
Preference number: 4 (lower is better)
Translates to: GEGAQCWCPRGIAVLAMGWVLFM*FEDHFC
Trigger: GCAAAAATGGTCTTCAAAGCACATAAAAAGCACCCA...CCCCATAGCCAGCACAGCTATCCCGCGGGGACACCAGCACTGAGCCCCCTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTATTCCCATTGCACCACAGCCCCAGTCCCCGTaGATGGTCGACGTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: HLSLLRGPQAGTIIPIAPQPQSP*MVDVSS
Trigger: GCTGGACACGTCGACCATCCACGGGGACTGGGGCTG...TGGTGCAATGGGAATAATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CCA 90 bp GTGCCTCCAGCCTTAACGGATAAGCACACGCTCATAACATGCACACGTCCATGCTGCGGAGAGAGAGGATaGCCAGGCAGGCACCTATGT +
Preference number: 4 (lower is better)
Translates to: VPPALTDKHTLITCTRPCCGERG*PGRHLC
Trigger: ACATAGGTGCCTGCCTGGCCATCCTCTCTCTCCGCA...GCATGGACGTGTGCATGTTATGAGCGTGTGCTTATCCGTTAAGGCTGGAGGCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CATTTACCACGGGCCAGGTGCTGGGCTAAGCAATTTCATTCCTCTCATTTAAGCTGTGGGCCAGCAGGTTaGCCACCAGCAGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: HLPRARCWAKQFHSSHLSCGPAG*PPAGWP
Trigger: AGGCCAGCCTGCTGGTGGCCAACCTGCTGGCCCACA...GCTTAAATGAGAGGAATGAAATTGCTTAGCCCAGCACCTGGCCCGTGGTAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CCA 90 bp GCTTCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAAATGATTTTCTCGATGTaGATCCTAGAGGCCTCGATC +
Preference number: 4 (lower is better)
Translates to: ASRALPPPAPLWDGVWGQMIFSM*ILEASI
Trigger: GATCGAGGCCTCTAGGATCCACATCGAGAAAATCAT...TTGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GTGCCTCCAGCCTTAACGGATAAGCACACGCTCATAACATGCACACGTCCATGCCATGGGTGCTGGACCTaGCGGTGTCACACTGAGTTC +
Preference number: 4 (lower is better)
Translates to: VPPALTDKHTLITCTRPCHGCWT*RCHTEF
Trigger: GAACTCAGTGTGACACCGCCAGGTCCAGCACCCATG...GCATGGACGTGTGCATGTTATGAGCGTGTGCTTATCCGTTAAGGCTGGAGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR TCA 90 bp AAGCAATTTCATTCCTCTCATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTAGAAGCCGCGCTTGCTaGGGGGACCCACACTGCGCA +
Preference number: 4 (lower is better)
Translates to: KQFHSSHLSLLRGPQAGTRSRAC*GDPHCA
Trigger: TGCGCAGTGTGGGTCCCCTCAGCAAGCGCGGCTTCT...AGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATGAGAGGAATGAAATTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR GCA 90 bp GCCAGGTGCTGGGCTAAGCAATTTCATTCCTCTCATTTAAGCCTCCTGAGAGGACCTCGTAGCCGGCACTaGACACGCATTTGCCGATGG +
Preference number: 4 (lower is better)
Translates to: ARCWAKQFHSSHLSLLRGPRSRH*TRICRW
Trigger: CCATCGGCAAATGCGTGTGCAGTGCCGGCTACGAGG...TCCTCTCAGGAGGCTTAAATGAGAGGAATGAAATTGCTTAGCCCAGCACCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR GCA 90 bp CAATTTCATTCCTCTCATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTGGGGCACAAAGCGGGTaGCGCTCCCACATGCCTCGC +
Preference number: 4 (lower is better)
Translates to: QFHSSHLSLLRGPQAGTIGAQSG*RSHMPR
Trigger: GCGAGGCATGTGGGAGCGGCACCCGCTTTGTGCCCC...AATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATGAGAGGAATGAAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR GCA 90 bp GTGCCTCCAGCCTTAACGGATAAGCACACGCTCATAACATGCACACGTCCATGCTCATGCGTAGCACCATaGCCAGAGAGGAGTATCCGC +
Preference number: 4 (lower is better)
Translates to: VPPALTDKHTLITCTRPCSCVAP*PERSIR
Trigger: GCGGATACTCCTCTCTGGGCATGGTGCTACGCATGA...GCATGGACGTGTGCATGTTATGAGCGTGTGCTTATCCGTTAAGGCTGGAGGCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CCTGAGAGGACCTCAGGCAGGTACTATTATTCCCATTGCACCAGGGAGGAAACTCCTGGTACGTGTGGATaGGCTGGAAGGACTCGTCCA +
Preference number: 4 (lower is better)
Translates to: PERTSGRYYYSHCTREETPGTCG*AGRTRP
Trigger: TGGACGAGTCCTTCCAGCCCATCCACACGTACCAGG...AGTTTCCTCCCTGGTGCAATGGGAATAATAGTACCTGCCTGAGGTCCTCTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CCA 90 bp CAGCTGAGGACATCTCATGTGCTCTGCCATGATGCCTCCATGAAGGCGGCCAGCTCGATTTTGAGGAACTaGCTTTCTTGTGTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: QLRTSHVLCHDASMKAASSILRN*LSCVLA
Trigger: GGCCAGCACACAAGAAAGCCAGTTCCTCAAAATCGA...GCTGGCCGCCTTCATGGAGGCATCATGGCAGAGCACATGAGATGTCCTCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp CATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTATTCCCATTGCACCAGGAGATCAGGTTCACTaGTGCCGAGGGTGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: HLSLLRGPQAGTIIPIAPGDQVH*CRGWPG
Trigger: ACCCGGCCACCCTCGGCACCAGTGAACCTGATCTCC...TGGTGCAATGGGAATAATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CCA 90 bp ACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGAGCGGATGATGTTGGGATaGTCGAATTGCCCCATGATG +
Preference number: 4 (lower is better)
Translates to: TLLQVPGPRCLHDCEDPERMMLG*SNCPMM
Trigger: CATCATGGGGCAATTCGACCATCCCAACATCATCCG...CTCTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GTGCCTCCAGCCTTAACGGATAAGCACACGCTCATAACATGCACACGTCCATGCCCCGACTCTGACACTTaGTTGCAGTGCAACCTGGGA +
Preference number: 4 (lower is better)
Translates to: VPPALTDKHTLITCTRPCPDSDT*LQCNLG
Trigger: TCCCAGGTTGCACTGCAACCAAGTGTCAGAGTCGGG...GCATGGACGTGTGCATGTTATGAGCGTGTGCTTATCCGTTAAGGCTGGAGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp ACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGAGGTTCAAGAGTCAGGATaGAGACCACAGAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: TLLQVPGPRCLHDCEDPEVQESG*RPQRGR
Trigger: TCTGCCTCTCTGTGGTCTCCATCCTGACTCTTGAAC...CTCTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CCA 90 bp GCACAGAGAGGGAAAGTTCTGGAACCTAGGCTTTCGACGGCCACACTAGCCTGCAGAGAGGGAAAGTTCTaGAACCTAGGCTTTCGACGG +
Preference number: 4 (lower is better)
Translates to: AQRGKVLEPRLSTATLACREGKF*NLGFRR
Trigger: CCGTCGAAAGCCTAGGTTCCAGAACTTTCCCTCTCT...GCAGGCTAGTGTGGCCGTCGAAAGCCTAGGTTCCAGAACTTTCCCTCTCTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR TCA 90 bp AAGCAATTTCATTCCTCTCATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTCTGGTCCCCAGGGGCTaGCTTGTAGAAGCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: KQFHSSHLSLLRGPQAGTLVPRG*LVEAQL
Trigger: GAGCTGGGCTTCTACAAGTCAGCCCCTGGGGACCAG...AGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATGAGAGGAATGAAATTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR GCA 90 bp ACACTTTTGCAAGTGCCAGGCCCACGGTGCCTCCATGACTGTGAGGATCCAGAGACATCTCATGTGCTCTaGCATGATGCCTCCATGAAG +
Preference number: 4 (lower is better)
Translates to: TLLQVPGPRCLHDCEDPETSHVL*HDASMK
Trigger: CTTCATGGAGGCATCATGGCAGAGCACATGAGATGT...CTCTGGATCCTCACAGTCATGGAGGCACCGTGGGCCTGGCACTTGCAAAAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR GCA 90 bp ATTTCATTCCTCTCATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTATGGGGGACCAGGACGCTaGGGGACGGAGTTTCTCCGC +
Preference number: 4 (lower is better)
Translates to: ISFLSFKPPERTSGRYYYGGPGR*GTEFLR
Trigger: GCGGAGAAACTCCGTCCCGCAGCGTCCTGGTCCCCC...ATAATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATGAGAGGAATGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CCA 90 bp GCCAGGTGCTGGGCTAAGCAATTTCATTCCTCTCATTTAAGCCTCCTGAGAGGACCCAGTCCCCGTGGATaGTCGACGTGTCCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: ARCWAKQFHSSHLSLLRGPSPRG*STCPAN
Trigger: ATTTGCTGGACACGTCGACCATCCACGGGGACTGGG...TCCTCTCAGGAGGCTTAAATGAGAGGAATGAAATTGCTTAGCCCAGCACCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CCA 90 bp CATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTATTCCCATTGCACCAACACGCATTTGCCGATaGGCACGAGCCACTCGCCCT +
Preference number: 4 (lower is better)
Translates to: HLSLLRGPQAGTIIPIAPTRICR*ARATRP
Trigger: AGGGCGAGTGGCTCGTGCCCATCGGCAAATGCGTGT...TGGTGCAATGGGAATAATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CCA 90 bp CATTTACCACGGGCCAGGTGCTGGGCTAAGCAATTTCATTCCTCTCATTTAAGCCAGAGCTCTGATCCCTaGATGGGTCTGAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: HLPRARCWAKQFHSSHLSQSSDP*MGLRQG
Trigger: CCCCTGCCTCAGACCCATCCAGGGATCAGAGCTCTG...GCTTAAATGAGAGGAATGAAATTGCTTAGCCCAGCACCTGGCCCGTGGTAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR TCA 90 bp CATTTACCACGGGCCAGGTGCTGGGCTAAGCAATTTCATTCCTCTCATTTAAGCCTGCACGGTAGTAGCTaGGGTCACAGTGGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: HLPRARCWAKQFHSSHLSLHGSS*GHSGRL
Trigger: AAGCCTGCCACTGTGACCTCAGCTACTACCGTGCAG...GCTTAAATGAGAGGAATGAAATTGCTTAGCCCAGCACCTGGCCCGTGGTAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR TCA 90 bp CCTGAGAGGACCTCAGGCAGGTACTATTATTCCCATTGCACCAGGGAGGAAACTCCACTCCAGAGTCACTaGTGTCCCATTCACACTGGA +
Preference number: 4 (lower is better)
Translates to: PERTSGRYYYSHCTREETPLQSH*CPIHTG
Trigger: TCCAGTGTGAATGGGACATCAGTGACTCTGGAGTGG...AGTTTCCTCCCTGGTGCAATGGGAATAATAGTACCTGCCTGAGGTCCTCTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR TCA 90 bp CATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTATTCCCATTGCACCAACACGGCATTGTAGGTaGTGTCACTGCGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: HLSLLRGPQAGTIIPIAPTRHCR*CHCGHL
Trigger: CAGGTGGCCGCAGTGACATCACCTACAATGCCGTGT...TGGTGCAATGGGAATAATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CCA 90 bp GCCAGGTGCTGGGCTAAGCAATTTCATTCCTCTCATTTAAGCCTCCTGAGAGGACAAACCTGGTACGTGTaGATGGGCTGGAAGGACTCG +
Preference number: 4 (lower is better)
Translates to: ARCWAKQFHSSHLSLLRGQTWYV*MGWKDS
Trigger: CGAGTCCTTCCAGCCCATCCACACGTACCAGGTTTG...TCCTCTCAGGAGGCTTAAATGAGAGGAATGAAATTGCTTAGCCCAGCACCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CCA 90 bp ATTTCATTCCTCTCATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTATGGCTTTCTTGTGTGCTaGCCCCCAGGTCGCGGTCCG +
Preference number: 4 (lower is better)
Translates to: ISFLSFKPPERTSGRYYYGFLVC*PPGRGP
Trigger: CGGACCGCGACCTGGGGGCCAGCACACAAGAAAGCC...ATAATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATGAGAGGAATGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CCA 90 bp CATTTACCACGGGCCAGGTGCTGGGCTAAGCAATTTCATTCCTCTCATTTAAGCTGCGGAGAGAGAGGATaGCCAGGCAGGCACCTATGT +
Preference number: 4 (lower is better)
Translates to: HLPRARCWAKQFHSSHLSCGERG*PGRHLC
Trigger: ACATAGGTGCCTGCCTGGCCATCCTCTCTCTCCGCA...GCTTAAATGAGAGGAATGAAATTGCTTAGCCCAGCACCTGGCCCGTGGTAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CCA 90 bp CATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTATTCCCATTGCACCACGCTGCAGTACATCTTaGGTGTGTCCCGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: HLSLLRGPQAGTIIPIAPRCSTS*VCPAPL
Trigger: CAGAGGAGCGGGACACACCCAAGATGTACTGCAGCG...TGGTGCAATGGGAATAATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR TCA 90 bp CATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTATTCCCATTGCACCATCTGGTTGGGGCTCATaGCGTTGCAAACCTGGTACG +
Preference number: 4 (lower is better)
Translates to: HLSLLRGPQAGTIIPIAPSGWGS*RCKPGT
Trigger: CGTACCAGGTTTGCAACGTCATGAGCCCCAACCAGA...TGGTGCAATGGGAATAATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR GCA 90 bp ATTTCATTCCTCTCATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTATCCAGCACACCAGGCATaGTGTTGCAGTCGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: ISFLSFKPPERTSGRYYYPAHQA*CCSRAG
Trigger: CCCTGCGCGACTGCAACAGCATGCCTGGTGTGCTGG...ATAATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATGAGAGGAATGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR GCA 90 bp GCCAGGTGCTGGGCTAAGCAATTTCATTCCTCTCATTTAAGCCTCCTGAGAGGAGTTTCTCCGCCTACCTaGCTGGTTCGTGGTGATGTT +
Preference number: 4 (lower is better)
Translates to: ARCWAKQFHSSHLSLLRGVSPPT*LVRGDV
Trigger: AACATCACCACGAACCAGGCAGGTAGGCGGAGAAAC...TCCTCTCAGGAGGCTTAAATGAGAGGAATGAAATTGCTTAGCCCAGCACCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR TCA 90 bp ATTTCATTCCTCTCATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTATATGGAGTCCCACCCATaGGCCGGATACGTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: ISFLSFKPPERTSGRYYYMESHP*AGYVSQ
Trigger: CTGGCTCACGTATCCGGCTCATGGGTGGGACTCCAT...ATAATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATGAGAGGAATGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR GCA 90 bp CAATTTCATTCCTCTCATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTCACTGCACACGCATTTaGCGATGGGCACGAGCCACT +
Preference number: 4 (lower is better)
Translates to: QFHSSHLSLLRGPQAGTIHCTRI*RWARAT
Trigger: AGTGGCTCGTGCCCATCGGCAAATGCGTGTGCAGTG...AATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATGAGAGGAATGAAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR GCA 90 bp ATTTCATTCCTCTCATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTATGGCCAGAGAGGCACTTaGCTAAAGGCCCACAGCACG +
Preference number: 4 (lower is better)
Translates to: ISFLSFKPPERTSGRYYYGQRGT*LKAHST
Trigger: CGTGCTGTGGGCCTTTAGGCAAGTGCCTCTCTGGCC...ATAATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATGAGAGGAATGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CCA 90 bp CTCCTGAGAGGACCTCAGGCAGGTACTATTATTCCCATTGCACCAGGGAGGAAATCGATTTTGAGGAACTaGCTTTCTTGTGTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LLRGPQAGTIIPIAPGRKSILRN*LSCVLA
Trigger: GGCCAGCACACAAGAAAGCCAGTTCCTCAAAATCGA...TTTCCTCCCTGGTGCAATGGGAATAATAGTACCTGCCTGAGGTCCTCTCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR GCA 90 bp ATTTCATTCCTCTCATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTATACTCGCCCTCCGCGCTaGAGTACATCTTGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: ISFLSFKPPERTSGRYYYTRPPR*STSWVC
Trigger: ACACACCCAAGATGTACTGCAGCGCGGAGGGCGAGT...ATAATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATGAGAGGAATGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CCA 90 bp CAATTTCATTCCTCTCATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTATGACGTTGCAAACCTaGTACGTGTGGATGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QFHSSHLSLLRGPQAGTIMTLQT*YVWMGW
Trigger: CCAGCCCATCCACACGTACCAGGTTTGCAACGTCAT...AATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATGAGAGGAATGAAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CCA 90 bp CATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTATTCCCATTGCACCAATGTCCCATTCACACTaGAGATCAGGTTCACTGGTG +
Preference number: 4 (lower is better)
Translates to: HLSLLRGPQAGTIIPIAPMSHSH*RSGSLV
Trigger: CACCAGTGAACCTGATCTCCAGTGTGAATGGGACAT...TGGTGCAATGGGAATAATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR GCA 90 bp CAATTTCATTCCTCTCATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTTTACCACGGGCCAGGTaGTGGGCTAAGCAATTTCAT +
Preference number: 4 (lower is better)
Translates to: QFHSSHLSLLRGPQAGTILPRAR*WAKQFH
Trigger: ATGAAATTGCTTAGCCCAGCACCTGGCCCGTGGTAA...AATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATGAGAGGAATGAAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CCA 90 bp CAATTTCATTCCTCTCATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTCCAGATTGCGCACCATaGCAGGGCACTTCTTATAGT +
Preference number: 4 (lower is better)
Translates to: QFHSSHLSLLRGPQAGTIPDCAP*QGTSYS
Trigger: ACTATAAGAAGTGCCCTGCCATGGTGCGCAATCTGG...AATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATGAGAGGAATGAAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR TCA 90 bp CATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTATTCCCATTGCACCATTTAATGACATTTATTaGGCATTTACCACGGGCCAG +
Preference number: 4 (lower is better)
Translates to: HLSLLRGPQAGTIIPIAPFNDIY*AFTTGQ
Trigger: CTGGCCCGTGGTAAATGCTCAATAAATGTCATTAAA...TGGTGCAATGGGAATAATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR GCA 90 bp CAATTTCATTCCTCTCATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTACTTCTTATAGTAGATaGGGAGAGAGAGGATGGCCA +
Preference number: 4 (lower is better)
Translates to: QFHSSHLSLLRGPQAGTITSYSR*GERGWP
Trigger: TGGCCATCCTCTCTCTCCGCATCTACTATAAGAAGT...AATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATGAGAGGAATGAAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR TCA 90 bp ATTTCATTCCTCTCATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTATCAATGGTGTCGATTTTaGGGAACTGGCTTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: ISFLSFKPPERTSGRYYYQWCRF*GTGFLV
Trigger: CACAAGAAAGCCAGTTCCTCAAAATCGACACCATTG...ATAATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATGAGAGGAATGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS GCA 90 bp GTGGGCTTGGTGGCTGCCTGGGCCCTGCTGGCTGTACATCAGAGGTaGCGGCGGGGCCCCTGGGTGCTGGTCAGCTGGGCCCGCATGGTC +
Preference number: 5 (lower is better)
Translates to: VGLVAAWALLAVHQR*RRGPWVLVSWARMV
Trigger: GACCATGCGGGCCCAGCTGACCAGCACCCAGGGGCCCCGCCGGCACCTCTGATGTACAGCCAGCAGGGCCCAGGCAGCCACCAAGCCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS GCA 90 bp GCAGGCTGGCCTGCACCAGGCTTGTCTGCTGGGGCACAAAGCGGGTaGCGCTCCCACATGCCTCGCAGCGGCTCAGTGCCCAGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: AGWPAPGLSAGAQSG*RSHMPRSGSVPRGS
Trigger: GCTGCCCCTGGGCACTGAGCCGCTGCGAGGCATGTGGGAGCGGCACCCGCTTTGTGCCCCAGCAGACAAGCCTGGTGCAGGCCAGCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000166244.8
ENST00000374644.8
CDS GCA 90 bp CTCACGTCCTCTGCCGCTGGCATGACCTGGGGTGGGCTTGGTGGCTaGCTGGGCCCTGCTGGCTGTACATCAGAGGTGCCGGCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: LTSSAAGMTWGGLGG*LGPAGCTSEVPAGP
Trigger: GGGCCCCGCCGGCACCTCTGATGTACAGCCAGCAGGGCCCAGGCAGCCACCAAGCCCACCCCAGGTCATGCCAGCGGCAGAGGACGTGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS TCA 90 bp GGGTGCAGGCTGAGGACGGCGGGTCCAGGGCTGCACGGTAGTAGCTaGGGTCACAGTGGCAGGCTTGGGCGGCTGGAGCTGCGGAGTGGC +
Preference number: 5 (lower is better)
Translates to: GCRLRTAGPGLHGSS*GHSGRLGRLELRSG
Trigger: GCCACTCCGCAGCTCCAGCCGCCCAAGCCTGCCACTGTGACCTCAGCTACTACCGTGCAGCCCTGGACCCGCCGTCCTCAGCCTGCACCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000166244.8
ENST00000374644.8
CDS TCA 90 bp GGCTCCTGCCACAGCAGCGAGACGCTGGTCTGCCCCGCCCGCTCTTaGCGGATCACCACCACCTGGGACGGGGCTGCCTGGTTCGTGGTG +
Preference number: 5 (lower is better)
Translates to: GSCHSSETLVCPARS*RITTTWDGAAWFVV
Trigger: CACCACGAACCAGGCAGCCCCGTCCCAGGTGGTGGTGATCCGTCAAGAGCGGGCGGGGCAGACCAGCGTCTCGCTGCTGTGGCAGGAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS CCA 90 bp CCAGCCCCTCACGTCCTCTGCCGCTGGCATGACCTGGGGTGGGCTTaGTGGCTGCCTGGGCCCTGCTGGCTGTACATCAGAGGTGCCGGC +
Preference number: 5 (lower is better)
Translates to: PAPHVLCRWHDLGWA*WLPGPCWLYIRGAG
Trigger: GCCGGCACCTCTGATGTACAGCCAGCAGGGCCCAGGCAGCCACCAAGCCCACCCCAGGTCATGCCAGCGGCAGAGGACGTGAGGGGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS GCA 90 bp AGCTGGGGGACCAGGACGCTGCGGGACGGAGTTTCTCCGCCTACCTaGCTGGTTCGTGGTGATGTTGACCACAGCGGCCCGGCGGGGCTC +
Preference number: 5 (lower is better)
Translates to: SWGTRTLRDGVSPPT*LVRGDVDHSGPAGL
Trigger: GAGCCCCGCCGGGCCGCTGTGGTCAACATCACCACGAACCAGGCAGGTAGGCGGAGAAACTCCGTCCCGCAGCGTCCTGGTCCCCCAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CAA 90 bp CAGGTGTCCTCACCAGGGTGGCCACCAAAGGCCCCTTCCCAGGCGCCTGACCCCTGGTTCGTGGTGATGTaGACCACAGCGGCCCGGCGG +
Preference number: 5 (lower is better)
Translates to: QVSSPGWPPKAPSQAPDPWFVVM*TTAARR
Trigger: CCGCCGGGCCGCTGTGGTCAACATCACCACGAACCA...GGGGTCAGGCGCCTGGGAAGGGGCCTTTGGTGGCCACCCTGGTGAGGACACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS GCA 90 bp GGGCACAAAGCGGGTGCCGCTCCCACATGCCTCGCAGCGGCTCAGTaGCCAGGGGCAGCGGCGGCACACGGCATTGTAGGTGATGTCACT +
Preference number: 5 (lower is better)
Translates to: GHKAGAAPTCLAAAQ*PGAAAAHGIVGDVT
Trigger: AGTGACATCACCTACAATGCCGTGTGCCGCCGCTGCCCCTGGGCACTGAGCCGCTGCGAGGCATGTGGGAGCGGCACCCGCTTTGTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000166244.8
ENST00000374644.8
CDS CCA 90 bp CTGCTGCCAGCCCCTCACGTCCTCTGCCGCTGGCATGACCTGGGGTaGGCTTGGTGGCTGCCTGGGCCCTGCTGGCTGTACATCAGAGGT +
Preference number: 5 (lower is better)
Translates to: LLPAPHVLCRWHDLG*AWWLPGPCWLYIRG
Trigger: ACCTCTGATGTACAGCCAGCAGGGCCCAGGCAGCCACCAAGCCCACCCCAGGTCATGCCAGCGGCAGAGGACGTGAGGGGCTGGCAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CAA 90 bp CGCCCTTGTGGGATGGTGTATGGGGACAAGAGCCTTGGCAGGAGGCCGGAGCCCCTGCCCCGCCCGCTCTaGACGGATCACCACCACCTG +
Preference number: 5 (lower is better)
Translates to: RPCGMVYGDKSLGRRPEPLPRPL*TDHHHL
Trigger: CAGGTGGTGGTGATCCGTCAAGAGCGGGCGGGGCAG...GGGCTCCGGCCTCCTGCCAAGGCTCTTGTCCCCATACACCATCCCACAAGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS CCA 90 bp CCTAGAGGCCTCGATCTCCCGAGTGAAACTGCGGCCCGCCCGGCCTaGCTCCTCGTAGGTGTGGGGTTCCGCATAGAACTGGGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: PRGLDLPSETAARPA*LLVGVGFRIELGLW
Trigger: CCAGAGCCCCAGTTCTATGCGGAACCCCACACCTACGAGGAGCCAGGCCGGGCGGGCCGCAGTTTCACTCGGGAGATCGAGGCCTCTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CAA 90 bp CAGGTGTCCTCACCAGGGTGGCCACCAAAGGCCCCTTCCCAGGCGCCTGACCCCGAGGAACTGGCTTTCTaGTGTGCTGGCCCCCAGGTC +
Preference number: 5 (lower is better)
Translates to: QVSSPGWPPKAPSQAPDPEELAF*CAGPQV
Trigger: GACCTGGGGGCCAGCACACAAGAAAGCCAGTTCCTC...GGGGTCAGGCGCCTGGGAAGGGGCCTTTGGTGGCCACCCTGGTGAGGACACCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CAA 90 bp CAGCCCCTCACGTCCTCTGCCGCTGGCATGACCTGGGGTGGGCTTGGTGGCTGCGTTGGCGAAGGGACTTaGAGTGAGGAGACCTGGGCC +
Preference number: 5 (lower is better)
Translates to: QPLTSSAAGMTWGGLGGCVGEGT*SEETWA
Trigger: GGCCCAGGTCTCCTCACTCAAAGTCCCTTCGCCAAC...GCAGCCACCAAGCCCACCCCAGGTCATGCCAGCGGCAGAGGACGTGAGGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS CCA 90 bp CAGTACATCTTGGGTGTGTCCCGCTCCTCTGAGTGCCGCACGCACTaGCCCCTCACCTCCACCAGTGAGGACGAGTCGGCCCCCGTCACT +
Preference number: 5 (lower is better)
Translates to: QYILGVSRSSECRTH*PLTSTSEDESAPVT
Trigger: AGTGACGGGGGCCGACTCGTCCTCACTGGTGGAGGTGAGGGGCCAGTGCGTGCGGCACTCAGAGGAGCGGGACACACCCAAGATGTACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000166244.8
ENST00000374644.8
CDS CCA 90 bp ATGCGTAGCACCATGCCCAGAGAGGAGTATCCGCCCGCAGCGAAGTaGTCTCGGTACCGGCCCATGCGGATGGAGTCCAGCCAGTCCCCC +
Preference number: 5 (lower is better)
Translates to: MRSTMPREEYPPAAK*SRYRPMRMESSQSP
Trigger: GGGGGACTGGCTGGACTCCATCCGCATGGGCCGGTACCGAGACCACTTCGCTGCGGGCGGATACTCCTCTCTGGGCATGGTGCTACGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CAA 90 bp GCTTCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAAGTCACAGTGGCAGGCTaGGGCGGCTGGAGCTGCGGA +
Preference number: 5 (lower is better)
Translates to: ASRALPPPAPLWDGVWGQVTVAG*GGWSCG
Trigger: TCCGCAGCTCCAGCCGCCCAAGCCTGCCACTGTGAC...TTGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CAA 90 bp AGGCGCCTGACCCCTGATAACTCCAGGTCCTGTGGCGAAGCCTTCAGCTCCTCCATGGGGACAAGAGCCTaGGCAGGAGGCCGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: RRLTPDNSRSCGEAFSSSMGTRA*AGGRSP
Trigger: GGGGCTCCGGCCTCCTGCCAAGGCTCTTGTCCCCAT...GGAGGAGCTGAAGGCTTCGCCACAGGACCTGGAGTTATCAGGGGTCAGGCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS CCA 90 bp CCAGGGGAGGGGCCCACTCCAGAGTCACTGATGTCCCATTCACACTaGAGATCAGGTTCACTGGTGCCGAGGGTGGCCGGGTGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: PGEGPTPESLMSHSH*RSGSLVPRVAGCRL
Trigger: CAGCCTGCACCCGGCCACCCTCGGCACCAGTGAACCTGATCTCCAGTGTGAATGGGACATCAGTGACTCTGGAGTGGGCCCCTCCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000166244.8
ENST00000374644.8
CDS-3UTR CAA 90 bp GGCTTCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACACTGCGCACCTCCGTGTaGAGCTTGAGACGCCGCACA +
Preference number: 5 (lower is better)
Translates to: GFQGTSTPSALVGWCMGTLRTSV*SLRRRT
Trigger: TGTGCGGCGTCTCAAGCTCAACACGGAGGTGCGCAG...TGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGAAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CAA 90 bp CCCCCACCACACACACACATGCACGCACACAGAGGCAGGCGAGTGATGTCCCTGCCGGCTTTGAGGGCCTaGATGGCCACGGGCACATCC +
Preference number: 5 (lower is better)
Translates to: PPPHTHMHAHRGRRVMSLPALRA*MATGTS
Trigger: GGATGTGCCCGTGGCCATCAAGGCCCTCAAAGCCGG...CAGGGACATCACTCGCCTGCCTCTGTGTGCGTGCATGTGTGTGTGTGGTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CAA 90 bp GGAGAGGGGGCTCAGTGCTGGTGTCCCCGCGGGATAGCTGTGCTGGCTATGGGGTGTCAGGGCTGGGCATaGAAAGGTTGGCGAAGGGAC +
Preference number: 5 (lower is better)
Translates to: GEGAQCWCPRGIAVLAMGCQGWA*KGWRRD
Trigger: GTCCCTTCGCCAACCTTTCAATGCCCAGCCCTGACA...CCCCATAGCCAGCACAGCTATCCCGCGGGGACACCAGCACTGAGCCCCCTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS TCA 90 bp ACTGCGGCCACCTGGGTCCAGGGGAGGGGCCCACTCCAGAGTCACTaGTGTCCCATTCACACTGGAGATCAGGTTCACTGGTGCCGAGGG +
Preference number: 5 (lower is better)
Translates to: TAATWVQGRGPLQSH*CPIHTGDQVHWCRG
Trigger: CCCTCGGCACCAGTGAACCTGATCTCCAGTGTGAATGGGACATCAGTGACTCTGGAGTGGGCCCCTCCCCTGGACCCAGGTGGCCGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000166244.8
ENST00000374644.8
CDS-3UTR CAA 90 bp GGGGACAGGTGTCCTCACCAGGGTGGCCACCAAAGGCCCCTTCCCAGGCGCCTGAGCCAGTTGTTCTGGTaGGGGCTCATGACGTTGCAA +
Preference number: 5 (lower is better)
Translates to: GDRCPHQGGHQRPLPRRLSQLFW*GLMTLQ
Trigger: TTGCAACGTCATGAGCCCCAACCAGAACAACTGGCT...CAGGCGCCTGGGAAGGGGCCTTTGGTGGCCACCCTGGTGAGGACACCTGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CAA 90 bp CCCCTTCCCAGGCGCCTGACCCCTGATAACTCCAGGTCCTGTGGCGAAGCCTTCGCGCTGCAGTACATCTaGGGTGTGTCCCGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: PLPRRLTPDNSRSCGEAFALQYI*GVSRSS
Trigger: AGAGGAGCGGGACACACCCAAGATGTACTGCAGCGC...GAAGGCTTCGCCACAGGACCTGGAGTTATCAGGGGTCAGGCGCCTGGGAAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CAA 90 bp CCCCCACCACACACACACATGCACGCACACAGAGGCAGGCGAGTGATGTCCCTGTGGCCTGCACCAGGCTaGTCTGCTGGGGCACAAAGC +
Preference number: 5 (lower is better)
Translates to: PPPHTHMHAHRGRRVMSLWPAPG*SAGAQS
Trigger: GCTTTGTGCCCCAGCAGACAAGCCTGGTGCAGGCCA...CAGGGACATCACTCGCCTGCCTCTGTGTGCGTGCATGTGTGTGTGTGGTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CAA 90 bp CGCGGCACCTGGATGGGGCTGAGACTCCCCGAATTATTGCAGGAGGGAGAGGGGAGGTCGGACACGCCATaGACGGCCTCGATCCAGAAG +
Preference number: 5 (lower is better)
Translates to: RGTWMGLRLPELLQEGEGRSDTP*TASIQK
Trigger: CTTCTGGATCGAGGCCGTCAATGGCGTGTCCGACCT...CCCCTCTCCCTCCTGCAATAATTCGGGGAGTCTCAGCCCCATCCAGGTGCCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CAA 90 bp CCCCCACCACACACACACATGCACGCACACAGAGGCAGGCGAGTGATGTCCCTGCTCGTGCGCAGCCAGTaGTTCTGGTTGGGGCTCATG +
Preference number: 5 (lower is better)
Translates to: PPPHTHMHAHRGRRVMSLLVRSQ*FWLGLM
Trigger: CATGAGCCCCAACCAGAACAACTGGCTGCGCACGAG...CAGGGACATCACTCGCCTGCCTCTGTGTGCGTGCATGTGTGTGTGTGGTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CAA 90 bp GCTTCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAAACCTCCGTGTTGAGCTaGAGACGCCGCACACCAAGG +
Preference number: 5 (lower is better)
Translates to: ASRALPPPAPLWDGVWGQTSVLS*RRRTPR
Trigger: CCTTGGTGTGCGGCGTCTCAAGCTCAACACGGAGGT...TTGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CAA 90 bp GCTCACCCAGGCAGAGACGAGGGTGGGCCTGGTGCTGGTGCAGTTCAGAAGTGGCGAGTGATGTCCCTGTaGGACTCTGTGACGTGGAGG +
Preference number: 5 (lower is better)
Translates to: AHPGRDEGGPGAGAVQKWRVMSL*DSVTWR
Trigger: CCTCCACGTCACAGAGTCCAACAGGGACATCACTCG...CCACTTCTGAACTGCACCAGCACCAGGCCCACCCTCGTCTCTGCCTGGGTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CAA 90 bp CCCCTTCCCAGGCGCCTGACCCCTGATAACTCCAGGTCCTGTGGCGAAGCCTTCAGACTCCCCGAATTATaGCAGGAGGGAGAGGGGGCT +
Preference number: 5 (lower is better)
Translates to: PLPRRLTPDNSRSCGEAFRLPEL*QEGEGA
Trigger: AGCCCCCTCTCCCTCCTGCAATAATTCGGGGAGTCT...GAAGGCTTCGCCACAGGACCTGGAGTTATCAGGGGTCAGGCGCCTGGGAAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS CCA 90 bp CGGCCCCCGTCACTGCCTCCGAGAAGGCAGCCAGATTGCGCACCATaGCAGGGCACTTCTTATAGTAGATGCGGAGAGAGAGGATGGCCA +
Preference number: 5 (lower is better)
Translates to: RPPSLPPRRQPDCAP*QGTSYSRCGERGWP
Trigger: TGGCCATCCTCTCTCTCCGCATCTACTATAAGAAGTGCCCTGCCATGGTGCGCAATCTGGCTGCCTTCTCGGAGGCAGTGACGGGGGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000166244.8
ENST00000374644.8
CDS-3UTR CAA 90 bp CAGCTGAGGACATCTCATGTGCTCTGCCATGATGCCTCCATGAAGGCGGCCAGCGAGAAGGCAGCCAGATaGCGCACCATGGCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: QLRTSHVLCHDASMKAASEKAAR*RTMAGH
Trigger: GTGCCCTGCCATGGTGCGCAATCTGGCTGCCTTCTC...GCTGGCCGCCTTCATGGAGGCATCATGGCAGAGCACATGAGATGTCCTCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CAA 90 bp AGCCTCCTGAGAGGACCTCAGGCAGGTACTATTATTCCCATTGCACCAGGGAGGGTCACAGTGGCAGGCTaGGGCGGCTGGAGCTGCGGA +
Preference number: 5 (lower is better)
Translates to: SLLRGPQAGTIIPIAPGRVTVAG*GGWSCG
Trigger: TCCGCAGCTCCAGCCGCCCAAGCCTGCCACTGTGAC...CCTCCCTGGTGCAATGGGAATAATAGTACCTGCCTGAGGTCCTCTCAGGAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CAA 90 bp GCTTCCAGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAAGACTCTGACACTTGGTaGCAGTGCAACCTGGGACGG +
Preference number: 5 (lower is better)
Translates to: ASRALPPPAPLWDGVWGQDSDTW*QCNLGR
Trigger: CCGTCCCAGGTTGCACTGCAACCAAGTGTCAGAGTC...TTGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCTGGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CAA 90 bp CCCCCACCACACACACACATGCACGCACACAGAGGCAGGCGAGTGATGTCCCTGTCCAGAGCCCAGAAATaGGGTAAGAGTGGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: PPPHTHMHAHRGRRVMSLSRAQK*GKSGVG
Trigger: CCCCACCCCACTCTTACCCAATTTCTGGGCTCTGGA...CAGGGACATCACTCGCCTGCCTCTGTGTGCGTGCATGTGTGTGTGTGGTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS GCA 90 bp AGGACGAGTCGGCCCCCGTCACTGCCTCCGAGAAGGCAGCCAGATTaGGCACCATGGCAGGGCACTTCTTATAGTAGATGCGGAGAGAGA +
Preference number: 5 (lower is better)
Translates to: RTSRPPSLPPRRQPD*APWQGTSYSRCGER
Trigger: TCTCTCTCCGCATCTACTATAAGAAGTGCCCTGCCATGGTGCGCAATCTGGCTGCCTTCTCGGAGGCAGTGACGGGGGCCGACTCGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000166244.8
ENST00000374644.8
CDS-3UTR CAA 90 bp AGGGCACTTCCACCCCCAGCGCCCTTGTGGGATGGTGTATGGGGACAAGAGCCTTTGGGGCTCATGACGTaGCAAACCTGGTACGTGTGG +
Preference number: 5 (lower is better)
Translates to: RALPPPAPLWDGVWGQEPLGLMT*QTWYVW
Trigger: CCACACGTACCAGGTTTGCAACGTCATGAGCCCCAA...AGGCTCTTGTCCCCATACACCATCCCACAAGGGCGCTGGGGGTGGAAGTGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CAA 90 bp GCACAGAGAGGGAAAGTTCTGGAACCTAGGCTTTCGACGGCCACACTAGCCTGCGAGAAGGCAGCCAGATaGCGCACCATGGCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: AQRGKVLEPRLSTATLACEKAAR*RTMAGH
Trigger: GTGCCCTGCCATGGTGCGCAATCTGGCTGCCTTCTC...GCAGGCTAGTGTGGCCGTCGAAAGCCTAGGTTCCAGAACTTTCCCTCTCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CAA 90 bp GCACAGAGAGGGAAAGTTCTGGAACCTAGGCTTTCGACGGCCACACTAGCCTGCTGGCCTGCACCAGGCTaGTCTGCTGGGGCACAAAGC +
Preference number: 5 (lower is better)
Translates to: AQRGKVLEPRLSTATLACWPAPG*SAGAQS
Trigger: GCTTTGTGCCCCAGCAGACAAGCCTGGTGCAGGCCA...GCAGGCTAGTGTGGCCGTCGAAAGCCTAGGTTCCAGAACTTTCCCTCTCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CAA 90 bp GTGCCTCCAGCCTTAACGGATAAGCACACGCTCATAACATGCACACGTCCATGCCCACCCCCAGCGCCCTaGTGGGATGGTGTATGGGGA +
Preference number: 5 (lower is better)
Translates to: VPPALTDKHTLITCTRPCPPPAP*WDGVWG
Trigger: TCCCCATACACCATCCCACAAGGGCGCTGGGGGTGG...GCATGGACGTGTGCATGTTATGAGCGTGTGCTTATCCGTTAAGGCTGGAGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CAA 90 bp CGCGGCACCTGGATGGGGCTGAGACTCCCCGAATTATTGCAGGAGGGAGAGGGGGCAATGGTGTCGATTTaGAGGAACTGGCTTTCTTGT +
Preference number: 5 (lower is better)
Translates to: RGTWMGLRLPELLQEGEGAMVSI*RNWLSC
Trigger: ACAAGAAAGCCAGTTCCTCAAAATCGACACCATTGC...CCCCTCTCCCTCCTGCAATAATTCGGGGAGTCTCAGCCCCATCCAGGTGCCGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CAA 90 bp AGGCGCCTGACCCCTGATAACTCCAGGTCCTGTGGCGAAGCCTTCAGCTCCTCCAAGGGGTGGACACACTaGATCACACACTGTTCACAT +
Preference number: 5 (lower is better)
Translates to: RRLTPDNSRSCGEAFSSSKGWTH*ITHCSH
Trigger: ATGTGAACAGTGTGTGATCAAGTGTGTCCACCCCTT...GGAGGAGCTGAAGGCTTCGCCACAGGACCTGGAGTTATCAGGGGTCAGGCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS-3UTR CAA 90 bp CCTGAGAGGACCTCAGGCAGGTACTATTATTCCCATTGCACCAGGGAGGAAACTAGGTCGGACACGCCATaGACGGCCTCGATCCAGAAG +
Preference number: 5 (lower is better)
Translates to: PERTSGRYYYSHCTREETRSDTP*TASIQK
Trigger: CTTCTGGATCGAGGCCGTCAATGGCGTGTCCGACCT...AGTTTCCTCCCTGGTGCAATGGGAATAATAGTACCTGCCTGAGGTCCTCTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CAA 90 bp GCCAGGTGCTGGGCTAAGCAATTTCATTCCTCTCATTTAAGCCTCCTGAGAGGAACCTCCGTGTTGAGCTaGAGACGCCGCACACCAAGG +
Preference number: 5 (lower is better)
Translates to: ARCWAKQFHSSHLSLLRGTSVLS*RRRTPR
Trigger: CCTTGGTGTGCGGCGTCTCAAGCTCAACACGGAGGT...TCCTCTCAGGAGGCTTAAATGAGAGGAATGAAATTGCTTAGCCCAGCACCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CAA 90 bp CATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTATTCCCATTGCACCACTGCGCACCTCCGTGTaGAGCTTGAGACGCCGCACA +
Preference number: 5 (lower is better)
Translates to: HLSLLRGPQAGTIIPIAPLRTSV*SLRRRT
Trigger: TGTGCGGCGTCTCAAGCTCAACACGGAGGTGCGCAG...TGGTGCAATGGGAATAATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CAA 90 bp GTGCCTCCAGCCTTAACGGATAAGCACACGCTCATAACATGCACACGTCCATGCCCACAGTGCCTCTTCTaGCAGATGAGCAGGAGCAGA +
Preference number: 5 (lower is better)
Translates to: VPPALTDKHTLITCTRPCPQCLF*QMSRSR
Trigger: TCTGCTCCTGCTCATCTGCAAGAAGAGGCACTGTGG...GCATGGACGTGTGCATGTTATGAGCGTGTGCTTATCCGTTAAGGCTGGAGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS CCA 90 bp AGAATGTGTTCCACTTTTCTAAAGGCAATGAAGAGCCTCCAGCTCTaGGTCCTGGTGAGGAGCGCAGGGCCAGAGAGGCACTTGCCTAAA +
Preference number: 5 (lower is better)
Translates to: RMCSTFLKAMKSLQL*VLVRSAGPERHLPK
Trigger: TTTAGGCAAGTGCCTCTCTGGCCCTGCGCTCCTCACCAGGACCCAGAGCTGGAGGCTCTTCATTGCCTTTAGAAAAGTGGAACACATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CAA 90 bp CAATTTCATTCCTCTCATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTTGGTTCGTGGTGATGTaGACCACAGCGGCCCGGCGG +
Preference number: 5 (lower is better)
Translates to: QFHSSHLSLLRGPQAGTIWFVVM*TTAARR
Trigger: CCGCCGGGCCGCTGTGGTCAACATCACCACGAACCA...AATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATGAGAGGAATGAAATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CAA 90 bp CAATTTCATTCCTCTCATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTGGGCCAGAGAGGCACTaGCCTAAAGGCCCACAGCAC +
Preference number: 5 (lower is better)
Translates to: QFHSSHLSLLRGPQAGTIGPERH*PKGPQH
Trigger: GTGCTGTGGGCCTTTAGGCAAGTGCCTCTCTGGCCC...AATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATGAGAGGAATGAAATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CAA 90 bp CATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTATTCCCATTGCACCATTGGGGCTCATGACGTaGCAAACCTGGTACGTGTGG +
Preference number: 5 (lower is better)
Translates to: HLSLLRGPQAGTIIPIAPLGLMT*QTWYVW
Trigger: CCACACGTACCAGGTTTGCAACGTCATGAGCCCCAA...TGGTGCAATGGGAATAATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CAA 90 bp ATTTCATTCCTCTCATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTATGAGGAACTGGCTTTCTaGTGTGCTGGCCCCCAGGTC +
Preference number: 5 (lower is better)
Translates to: ISFLSFKPPERTSGRYYYEELAF*CAGPQV
Trigger: GACCTGGGGGCCAGCACACAAGAAAGCCAGTTCCTC...ATAATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATGAGAGGAATGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CAA 90 bp ATTTCATTCCTCTCATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTATGCGCTGCAGTACATCTaGGGTGTGTCCCGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: ISFLSFKPPERTSGRYYYALQYI*GVSRSS
Trigger: AGAGGAGCGGGACACACCCAAGATGTACTGCAGCGC...ATAATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATGAGAGGAATGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CAA 90 bp CTCCTGAGAGGACCTCAGGCAGGTACTATTATTCCCATTGCACCAGGGAGGAAAGCAATGGTGTCGATTTaGAGGAACTGGCTTTCTTGT +
Preference number: 5 (lower is better)
Translates to: LLRGPQAGTIIPIAPGRKAMVSI*RNWLSC
Trigger: ACAAGAAAGCCAGTTCCTCAAAATCGACACCATTGC...TTTCCTCCCTGGTGCAATGGGAATAATAGTACCTGCCTGAGGTCCTCTCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS-3UTR CAA 90 bp ATTTCATTCCTCTCATTTAAGCCTCCTGAGAGGACCTCAGGCAGGTACTATTATAGCCAGTTGTTCTGGTaGGGGCTCATGACGTTGCAA +
Preference number: 5 (lower is better)
Translates to: ISFLSFKPPERTSGRYYYSQLFW*GLMTLQ
Trigger: TTGCAACGTCATGAGCCCCAACCAGAACAACTGGCT...ATAATAGTACCTGCCTGAGGTCCTCTCAGGAGGCTTAAATGAGAGGAATGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS GCA 72 bp GTGGCTGCCTGGGCCCTGCTGGCTGTACATCAGAGGTaGCGGCGGGGCCCCTGGGTGCTGGTCAGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: VAAWALLAVHQR*RRGPWVLVSWA
Trigger: GGCCCAGCTGACCAGCACCCAGGGGCCCCGCCGGCACCTCTGATGTACAGCCAGCAGGGCCCAGGCAGCCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS GCA 72 bp TGTCTGCTGGGGCACAAAGCGGGTGCCGCTCCCACATaGCTCGCAGCGGCTCAGTGCCCAGGGGCAGCGGCG +
Preference number: 6 (lower is better)
Translates to: CLLGHKAGAAPT*LAAAQCPGAAA
Trigger: CGCCGCTGCCCCTGGGCACTGAGCCGCTGCGAGGCATGTGGGAGCGGCACCCGCTTTGTGCCCCAGCAGACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000166244.8
ENST00000374644.8
CDS CCA 72 bp CGGGGCCGGGGTTTCCCGGTCTCCACCTCCATGGCCTaGCTGAAGCGGCCACAGCCTGCTGAGGTGCGGGCT +
Preference number: 6 (lower is better)
Translates to: RGRGFPVSTSMA*LKRPQPAEVRA
Trigger: AGCCCGCACCTCAGCAGGCTGTGGCCGCTTCAGCCAGGCCATGGAGGTGGAGACCGGGAAACCCCGGCCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS TCA 72 bp GTGCCCAGGGGCAGCGGCGGCACACGGCATTGTAGGTaGTGTCACTGCGGCCACCTGGGTCCAGGGGAGGGG +
Preference number: 6 (lower is better)
Translates to: VPRGSGGTRHCR*CHCGHLGPGEG
Trigger: CCCCTCCCCTGGACCCAGGTGGCCGCAGTGACATCACCTACAATGCCGTGTGCCGCCGCTGCCCCTGGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000166244.8
ENST00000374644.8
CDS TCA 72 bp CACAGCAGCGAGACGCTGGTCTGCCCCGCCCGCTCTTaGCGGATCACCACCACCTGGGACGGGGCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: HSSETLVCPARS*RITTTWDGAAW
Trigger: CCAGGCAGCCCCGTCCCAGGTGGTGGTGATCCGTCAAGAGCGGGCGGGGCAGACCAGCGTCTCGCTGCTGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS CCA 72 bp GAGGGCCTTGATGGCCACGGGCACATCCCGCTGCCCTaGCACCCGCAGCCTCCCGTAGCAGACTTCCCCGGA +
Preference number: 6 (lower is better)
Translates to: EGLDGHGHIPLP*HPQPPVADFPG
Trigger: TCCGGGGAAGTCTGCTACGGGAGGCTGCGGGTGCCAGGGCAGCGGGATGTGCCCGTGGCCATCAAGGCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS CAA 72 bp CCACAGCAGCGAGACGCTGGTCTGCCCCGCCCGCTCTaGACGGATCACCACCACCTGGGACGGGGCTGCCTG +
Preference number: 6 (lower is better)
Translates to: PQQRDAGLPRPL*TDHHHLGRGCL
Trigger: CAGGCAGCCCCGTCCCAGGTGGTGGTGATCCGTCAAGAGCGGGCGGGGCAGACCAGCGTCTCGCTGCTGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS CAA 90 bp GGGCTCCTGCCACAGCAGCGAGACGCTGGTCTGCCCCGCCCGCTCTaGACGGATCACCACCACCTGGGACGGGGCTGCCTGGTTCGTGGT +
Preference number: 6 (lower is better)
Translates to: GLLPQQRDAGLPRPL*TDHHHLGRGCLVRG
Trigger: ACCACGAACCAGGCAGCCCCGTCCCAGGTGGTGGTGATCCGTCAAGAGCGGGCGGGGCAGACCAGCGTCTCGCTGCTGTGGCAGGAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS CAA 90 bp TGCGGGACGGAGTTTCTCCGCCTACCTGCCTGGTTCGTGGTGATGTaGACCACAGCGGCCCGGCGGGGCTCGGGGCTCAGGTCGGACACG +
Preference number: 6 (lower is better)
Translates to: CGTEFLRLPAWFVVM*TTAARRGSGLRSDT
Trigger: CGTGTCCGACCTGAGCCCCGAGCCCCGCCGGGCCGCTGTGGTCAACATCACCACGAACCAGGCAGGTAGGCGGAGAAACTCCGTCCCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS GCA 72 bp CCTGCACCAGGCTTGTCTGCTGGGGCACAAAGCGGGTaGCGCTCCCACATGCCTCGCAGCGGCTCAGTGCCC +
Preference number: 6 (lower is better)
Translates to: PAPGLSAGAQSG*RSHMPRSGSVP
Trigger: GGGCACTGAGCCGCTGCGAGGCATGTGGGAGCGGCACCCGCTTTGTGCCCCAGCAGACAAGCCTGGTGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000166244.8
ENST00000374644.8
CDS CCA 72 bp GCCACCAGCAGGCTGGCCTGCACCAGGCTTGTCTGCTaGGGCACAAAGCGGGTGCCGCTCCCACATGCCTCG +
Preference number: 6 (lower is better)
Translates to: ATSRLACTRLVC*GTKRVPLPHAS
Trigger: CGAGGCATGTGGGAGCGGCACCCGCTTTGTGCCCCAGCAGACAAGCCTGGTGCAGGCCAGCCTGCTGGTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000166244.8
ENST00000374644.8
CDS CCA 72 bp TCGGCTGCTCGGGCTCCTGCCACAGCAGCGAGACGCTaGTCTGCCCCGCCCGCTCTTGACGGATCACCACCA +
Preference number: 6 (lower is better)
Translates to: SAARAPATAARR*SAPPALDGSPP
Trigger: TGGTGGTGATCCGTCAAGAGCGGGCGGGGCAGACCAGCGTCTCGCTGCTGTGGCAGGAGCCCGAGCAGCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS TCA 72 bp CTGAGGACGGCGGGTCCAGGGCTGCACGGTAGTAGCTaGGGTCACAGTGGCAGGCTTGGGCGGCTGGAGCTG +
Preference number: 6 (lower is better)
Translates to: LRTAGPGLHGSS*GHSGRLGRLEL
Trigger: CAGCTCCAGCCGCCCAAGCCTGCCACTGTGACCTCAGCTACTACCGTGCAGCCCTGGACCCGCCGTCCTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000166244.8
ENST00000374644.8
CDS TCA 72 bp CACCTCCATGGCCTGGCTGAAGCGGCCACAGCCTGCTaGGGTGCGGGCTCGGACCTGGAACACGTAGCGGGT +
Preference number: 6 (lower is better)
Translates to: HLHGLAEAATAC*GAGSDLEHVAG
Trigger: ACCCGCTACGTGTTCCAGGTCCGAGCCCGCACCTCAGCAGGCTGTGGCCGCTTCAGCCAGGCCATGGAGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS GCA 72 bp TTGGCCACCAGCAGGCTGGCCTGCACCAGGCTTGTCTaGTGGGGCACAAAGCGGGTGCCGCTCCCACATGCC +
Preference number: 6 (lower is better)
Translates to: LATSRLACTRLV*WGTKRVPLPHA
Trigger: GGCATGTGGGAGCGGCACCCGCTTTGTGCCCCAGCAGACAAGCCTGGTGCAGGCCAGCCTGCTGGTGGCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000166244.8
ENST00000374644.8
CDS GCA 72 bp TCTGCCGCTGGCATGACCTGGGGTGGGCTTGGTGGCTaGCTGGGCCCTGCTGGCTGTACATCAGAGGTGCCG +
Preference number: 6 (lower is better)
Translates to: SAAGMTWGGLGG*LGPAGCTSEVP
Trigger: CGGCACCTCTGATGTACAGCCAGCAGGGCCCAGGCAGCCACCAAGCCCACCCCAGGTCATGCCAGCGGCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS CCA 72 bp TTGGGTGTGTCCCGCTCCTCTGAGTGCCGCACGCACTaGCCCCTCACCTCCACCAGTGAGGACGAGTCGGCC +
Preference number: 6 (lower is better)
Translates to: LGVSRSSECRTH*PLTSTSEDESA
Trigger: GGCCGACTCGTCCTCACTGGTGGAGGTGAGGGGCCAGTGCGTGCGGCACTCAGAGGAGCGGGACACACCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000166244.8
ENST00000374644.8
CDS CAA 72 bp GAGTTTCTCCGCCTACCTGCCTGGTTCGTGGTGATGTaGACCACAGCGGCCCGGCGGGGCTCGGGGCTCAGG +
Preference number: 6 (lower is better)
Translates to: EFLRLPAWFVVM*TTAARRGSGLR
Trigger: CCTGAGCCCCGAGCCCCGCCGGGCCGCTGTGGTCAACATCACCACGAACCAGGCAGGTAGGCGGAGAAACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS TCA 72 bp CGCGCTGCAGTACATCTTGGGTGTGTCCCGCTCCTCTaGGTGCCGCACGCACTGGCCCCTCACCTCCACCAG +
Preference number: 6 (lower is better)
Translates to: RAAVHLGCVPLL*VPHALAPHLHQ
Trigger: CTGGTGGAGGTGAGGGGCCAGTGCGTGCGGCACTCAGAGGAGCGGGACACACCCAAGATGTACTGCAGCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000166244.8
ENST00000374644.8
CDS GCA 72 bp GGGCGCGCACGTCCTGGGCGTTCATGCGTAGCACCATaGCCAGAGAGGAGTATCCGCCCGCAGCGAAGTGGT +
Preference number: 6 (lower is better)
Translates to: GRARPGRSCVAP*PERSIRPQRSG
Trigger: ACCACTTCGCTGCGGGCGGATACTCCTCTCTGGGCATGGTGCTACGCATGAACGCCCAGGACGTGCGCGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS GCA 72 bp ACCAGGACGCTGCGGGACGGAGTTTCTCCGCCTACCTaGCTGGTTCGTGGTGATGTTGACCACAGCGGCCCG +
Preference number: 6 (lower is better)
Translates to: TRTLRDGVSPPT*LVRGDVDHSGP
Trigger: CGGGCCGCTGTGGTCAACATCACCACGAACCAGGCAGGTAGGCGGAGAAACTCCGTCCCGCAGCGTCCTGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374644.8
CDS CCA 72 bp CTCGATCTCCCGAGTGAAACTGCGGCCCGCCCGGCCTaGCTCCTCGTAGGTGTGGGGTTCCGCATAGAACTG +
Preference number: 6 (lower is better)
Translates to: LDLPSETAARPA*LLVGVGFRIEL
Trigger: CAGTTCTATGCGGAACCCCACACCTACGAGGAGCCAGGCCGGGCGGGCCGCAGTTTCACTCGGGAGATCGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS CCA 72 bp ACCATGCCCAGAGAGGAGTATCCGCCCGCAGCGAAGTaGTCTCGGTACCGGCCCATGCGGATGGAGTCCAGC +
Preference number: 6 (lower is better)
Translates to: TMPREEYPPAAK*SRYRPMRMESS
Trigger: GCTGGACTCCATCCGCATGGGCCGGTACCGAGACCACTTCGCTGCGGGCGGATACTCCTCTCTGGGCATGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000166244.8
CDS CAA 72 bp CGCTTGCTGAGGGGACCCACACTGCGCACCTCCGTGTaGAGCTTGAGACGCCGCACACCAAGGTCGGCACCT +
Preference number: 6 (lower is better)
Translates to: RLLRGPTLRTSV*SLRRRTPRSAP
Trigger: AGGTGCCGACCTTGGTGTGCGGCGTCTCAAGCTCAACACGGAGGTGCGCAGTGTGGGTCCCCTCAGCAAGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000166244.8
ENST00000374644.8
CDS CAA 72 bp CTGAGGGGACCCACACTGCGCACCTCCGTGTTGAGCTaGAGACGCCGCACACCAAGGTCGGCACCTGTGAAG +
Preference number: 6 (lower is better)
Translates to: LRGPTLRTSVLS*RRRTPRSAPVK
Trigger: CTTCACAGGTGCCGACCTTGGTGTGCGGCGTCTCAAGCTCAACACGGAGGTGCGCAGTGTGGGTCCCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000166244.8
ENST00000374644.8
CDS CCA 72 bp GGGCCCACTCCAGAGTCACTGATGTCCCATTCACACTaGAGATCAGGTTCACTGGTGCCGAGGGTGGCCGGG +
Preference number: 6 (lower is better)
Translates to: GPTPESLMSHSH*RSGSLVPRVAG
Trigger: CCCGGCCACCCTCGGCACCAGTGAACCTGATCTCCAGTGTGAATGGGACATCAGTGACTCTGGAGTGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000166244.8
ENST00000374644.8
CDS TCA 72 bp ACCTGGGTCCAGGGGAGGGGCCCACTCCAGAGTCACTaGTGTCCCATTCACACTGGAGATCAGGTTCACTGG +
Preference number: 6 (lower is better)
Translates to: TWVQGRGPLQSH*CPIHTGDQVHW
Trigger: CCAGTGAACCTGATCTCCAGTGTGAATGGGACATCAGTGACTCTGGAGTGGGCCCCTCCCCTGGACCCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000166244.8
ENST00000374644.8
CDS CCA 72 bp CTCATGACGTTGCAAACCTGGTACGTGTGGATGGGCTaGAAGGACTCGTCCACCTCGTTGATGGAGTCCCAC +
Preference number: 6 (lower is better)
Translates to: LMTLQTWYVWMG*KDSSTSLMESH
Trigger: GTGGGACTCCATCAACGAGGTGGACGAGTCCTTCCAGCCCATCCACACGTACCAGGTTTGCAACGTCATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000166244.8
ENST00000374644.8
CDS CCA 72 bp TGGTTGGGGCTCATGACGTTGCAAACCTGGTACGTGTaGATGGGCTGGAAGGACTCGTCCACCTCGTTGATG +
Preference number: 6 (lower is better)
Translates to: WLGLMTLQTWYV*MGWKDSSTSLM
Trigger: CATCAACGAGGTGGACGAGTCCTTCCAGCCCATCCACACGTACCAGGTTTGCAACGTCATGAGCCCCAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000166244.8
ENST00000374644.8
CDS CCA 72 bp TCACTGCCTCCGAGAAGGCAGCCAGATTGCGCACCATaGCAGGGCACTTCTTATAGTAGATGCGGAGAGAGA +
Preference number: 6 (lower is better)
Translates to: SLPPRRQPDCAP*QGTSYSRCGER
Trigger: TCTCTCTCCGCATCTACTATAAGAAGTGCCCTGCCATGGTGCGCAATCTGGCTGCCTTCTCGGAGGCAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000166244.8
ENST00000374644.8
CDS CCA 72 bp TCCCCGGAGTCTCCAGAGCCGATGATTTTCTCGATGTaGATCCTAGAGGCCTCGATCTCCCGAGTGAAACTG +
Preference number: 6 (lower is better)
Translates to: SPESPEPMIFSM*ILEASISRVKL
Trigger: CAGTTTCACTCGGGAGATCGAGGCCTCTAGGATCCACATCGAGAAAATCATCGGCTCTGGAGACTCCGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000166244.8