RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPHA5 (Homo sapiens)

Ensembl gene IDs: ENSG00000145242

Ensembl transcript IDs: ENST00000273854.7, ENST00000354839.8, ENST00000432638.6, ENST00000511294.1, ENST00000613740.5, ENST00000622150.4

Found 781 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACAGAAGCCTGCACAGTTAAATCCTTCTACATCCTGCTGAAAATGTaGCCTTCGGTGTCAACTTTGCTTGACAAGATACTTTTCAGGACT +
Preference number: 1 (lower is better)
Translates to: TEACTVKSFYILLKM*PSVSTLLDKILFRT
Trigger: AGTCCTGAAAAGTATCTTGTCAAGCAAAGTTGACACCGAAGGGCACATTTTCAGCAGGATGTAGAAGGATTTAACTGTGCAGGCTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR GCA 90 bp ATGCTTCGTGCTATGTGCCTGGATTTAACAACATTAACAGAAGCCTaGACAGTTAAATCCTTCTACATCCTGCTGAAAATGTGCCCTTCG +
Preference number: 1 (lower is better)
Translates to: MLRAMCLDLTTLTEA*TVKSFYILLKMCPS
Trigger: CGAAGGGCACATTTTCAGCAGGATGTAGAAGGATTTAACTGTGCAGGCTTCTGTTAATGTTGTTAAATCCAGGCACATAGCACGAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR GCA 90 bp AATGGGAATGGTTACAACGGATTAACACTTAAGGGTGATGCTTCGTaGTATGTGCCTGGATTTAACAACATTAACAGAAGCCTGCACAGT +
Preference number: 1 (lower is better)
Translates to: NGNGYNGLTLKGDAS*YVPGFNNINRSLHS
Trigger: ACTGTGCAGGCTTCTGTTAATGTTGTTAAATCCAGGCACATAGCACGAAGCATCACCCTTAAGTGTTAATCCGTTGTAACCATTCCCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR CCA 90 bp CAAGTATGCCAATGTTATTTGTTTGAAGCAAAGAAGCAAAGATACTaGCCACATGTAGCATTAACCATGCAGTTGTTAACAATACAGGCT +
Preference number: 1 (lower is better)
Translates to: QVCQCYLFEAKKQRY*PHVALTMQLLTIQA
Trigger: AGCCTGTATTGTTAACAACTGCATGGTTAATGCTACATGTGGCCAGTATCTTTGCTTCTTTGCTTCAAACAAATAACATTGGCATACTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
3UTR-3UTR TCA 90 bp GTATGCCAATGTTATTTGTTTGAAGCAAAGAAGCAAAGATACTGGCCACATGTAATGATGAGGCTTCTTTaGGAGCTGCCACACATCCGC +
Preference number: 2 (lower is better)
Translates to: VCQCYLFEAKKQRYWPHVMMRLL*ELPHIR
Trigger: GCGGATGTGTGGCAGCTCTCAAAGAAGCCTCATCAT...TACATGTGGCCAGTATCTTTGCTTCTTTGCTTCAAACAAATAACATTGGCATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
3UTR CAA 90 bp GTTAAACTTTGCCTTGGATTATGGCCTCACTACATTTTACTAGAGTaGGCTCCTCTCCTTGTTCCATTTCTCACACTTGCAGATGAGATT +
Preference number: 2 (lower is better)
Translates to: VKLCLGLWPHYILLE*APLLVPFLTLADEI
Trigger: AATCTCATCTGCAAGTGTGAGAAATGGAACAAGGAGAGGAGCCAACTCTAGTAAAATGTAGTGAGGCCATAATCCAAGGCAAAGTTTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR CAA 90 bp GCAAAGAAGCAAAGATACTGGCCACATGTAGCATTAACCATGCAGTaGTTAACAATACAGGCTAAAGATGATGAGGCTTCTTTGAGAGCT +
Preference number: 2 (lower is better)
Translates to: AKKQRYWPHVALTMQ*LTIQAKDDEASLRA
Trigger: AGCTCTCAAAGAAGCCTCATCATCTTTAGCCTGTATTGTTAACAACTGCATGGTTAATGCTACATGTGGCCAGTATCTTTGCTTCTTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
3UTR CAA 90 bp AAATCCTTCTACATCCTGCTGAAAATGTGCCCTTCGGTGTCAACTTaGCTTGACAAGATACTTTTCAGGACTCAGAAAGGTGAAATTTCT +
Preference number: 2 (lower is better)
Translates to: KSFYILLKMCPSVST*LDKILFRTQKGEIS
Trigger: AGAAATTTCACCTTTCTGAGTCCTGAAAAGTATCTTGTCAAGCAAAGTTGACACCGAAGGGCACATTTTCAGCAGGATGTAGAAGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR CAA 90 bp ACCGTGAGAATGAGATTCAGTAAATTTAGAAAGCAAGCTGAGTGGTaGGTTTCAGGTCCTTTTAGTTATCGGTATGAAGGAAGAGAATGC +
Preference number: 2 (lower is better)
Translates to: TVRMRFSKFRKQAEW*VSGPFSYRYEGREC
Trigger: GCATTCTCTTCCTTCATACCGATAACTAAAAGGACCTGAAACCAACCACTCAGCTTGCTTTCTAAATTTACTGAATCTCATTCTCACGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
3UTR-3UTR TCA 90 bp GAAATAATGGACAAAGCATATGTGTTATCAAGTAGATATGATCTGGTGGACCGTTCCGCAAAGGTTAACTaGTTTCCCTTACCTCATCCA +
Preference number: 2 (lower is better)
Translates to: EIMDKAYVLSSRYDLVDRSAKVN*FPLPHP
Trigger: TGGATGAGGTAAGGGAAATCAGTTAACCTTTGCGGA...ACGGTCCACCAGATCATATCTACTTGATAACACATATGCTTTGTCCATTATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
3UTR-3UTR GCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAAAGGGTGATGCTTCGTaGTATGTGCCTGGATTTAAC +
Preference number: 2 (lower is better)
Translates to: QYCERLMPLKILLLAITIKGDAS*YVPGFN
Trigger: GTTAAATCCAGGCACATAGCACGAAGCATCACCCTT...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR-3UTR TCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACAGGACTCAGAAAGGTaGAATTTCTTACAGGGGTAC +
Preference number: 2 (lower is better)
Translates to: QFFKVQYCERLMPLKILLQDSER*NFLQGY
Trigger: GTACCCCTGTAAGAAATTTCACCTTTCTGAGTCCTG...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR-3UTR GCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAATCCTGCTGAAAATGTaGCCTTCGGTGTCAACTTTG +
Preference number: 2 (lower is better)
Translates to: QFFKVQYCERLMPLKILLILLKM*PSVSTL
Trigger: CAAAGTTGACACCGAAGGGCACATTTTCAGCAGGAT...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR-3UTR CCA 90 bp GTTCCACTGAGATTGTACCAAATAACAAATCAGAGGCGGGATCTGATACATCCTATGTACAAATATGTTTaGTCCTTATGTAGGACTAGC +
Preference number: 2 (lower is better)
Translates to: VPLRLYQITNQRRDLIHPMYKYV*SLCRTS
Trigger: GCTAGTCCTACATAAGGACCAAACATATTTGTACAT...AGGATGTATCAGATCCCGCCTCTGATTTGTTATTTGGTACAATCTCAGTGGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
3UTR-3UTR TCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATATACAAATTCTGTGGCTaGGGCAAATGTTTTCTAAGG +
Preference number: 2 (lower is better)
Translates to: ISYRGTRLMARRTALSLIYKFCG*GKCFLR
Trigger: CCTTAGAAAACATTTGCCTCAGCCACAGAATTTGTA...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR-3UTR GCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAAAAGAGGTACTTTACTaGTTAAGTAAAGGGTGGGCA +
Preference number: 2 (lower is better)
Translates to: QYCERLMPLKILLLAITIKEVLY*LSKGWA
Trigger: TGCCCACCCTTTACTTAAGCAGTAAAGTACCTCTTT...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR-3UTR GCA 90 bp GATATGATCTGGTGGACCGTGAGAATGAGATTCAGTAAATTTAGAAAGCAAGCTAAAACACCAGTATTTTaGCAAGGAGCTGTTATTCCA +
Preference number: 2 (lower is better)
Translates to: DMIWWTVRMRFSKFRKQAKTPVF*QGAVIP
Trigger: TGGAATAACAGCTCCTTGGCAAAATACTGGTGTTTT...AGCTTGCTTTCTAAATTTACTGAATCTCATTCTCACGGTCCACCAGATCATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511294.1
3UTR-3UTR CCA 90 bp GAAATAATGGACAAAGCATATGTGTTATCAAGTAGATATGATCTGGTGGACCGTATTGGTGATAAATGGTaGTACCCTGTTACCTTCTGT +
Preference number: 2 (lower is better)
Translates to: EIMDKAYVLSSRYDLVDRIGDKW*YPVTFC
Trigger: ACAGAAGGTAACAGGGTACCACCATTTATCACCAAT...ACGGTCCACCAGATCATATCTACTTGATAACACATATGCTTTGTCCATTATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
3UTR-3UTR TCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAGCAGAATCATTCACTTaGAGAAGCGACATTTACATG +
Preference number: 2 (lower is better)
Translates to: QFFKVQYCERLMPLKILLAESFT*RSDIYM
Trigger: CATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGC...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR-3UTR TCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTATCTCACACTTGCAGATaGGATTGGCATTTTCCAATT +
Preference number: 2 (lower is better)
Translates to: QFFKVQYCERLMPLKILLSHTCR*DWHFPI
Trigger: AATTGGAAAATGCCAATCTCATCTGCAAGTGTGAGA...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR-3UTR GCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATAGTGCTGTTTACAAAGTaGAGAATCATTCACTTGAAG +
Preference number: 2 (lower is better)
Translates to: ISYRGTRLMARRTALSLIVLFTK*RIIHLK
Trigger: CTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR-3UTR GCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATACTTCGGTGTCAACTTTaGTTGACAAGATACTTTTCA +
Preference number: 2 (lower is better)
Translates to: QYCERLMPLKILLLAITILRCQL*LTRYFS
Trigger: TGAAAAGTATCTTGTCAAGCAAAGTTGACACCGAAG...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR-3UTR GCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAACATTAACAGAAGCCTaGACAGTTAAATCCTTCTAC +
Preference number: 2 (lower is better)
Translates to: QYCERLMPLKILLLAITITLTEA*TVKSFY
Trigger: GTAGAAGGATTTAACTGTGCAGGCTTCTGTTAATGT...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR-3UTR GCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAAGATTTGTTAAACTTTaGCTTGGATTATGGCCTCAC +
Preference number: 2 (lower is better)
Translates to: QYCERLMPLKILLLAITIRFVKL*LGLWPH
Trigger: GTGAGGCCATAATCCAAGGCAAAGTTTAACAAATCT...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR-3UTR CCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATACTTTGCCTTGGATTATaGCCTCACTACATTTTACTA +
Preference number: 2 (lower is better)
Translates to: QYCERLMPLKILLLAITILCLGL*PHYILL
Trigger: TAGTAAAATGTAGTGAGGCCATAATCCAAGGCAAAG...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR-3UTR TCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTATGTTGTAACTTAAGATaGTGTCTAACTTCATGTCCC +
Preference number: 2 (lower is better)
Translates to: QFFKVQYCERLMPLKILLCCNLR*CLTSCP
Trigger: GGGACATGAAGTTAGACATCATCTTAAGTTACAACA...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR-3UTR GCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAATGCTTCGTGCTATGTaGCTGGATTTAACAACATTA +
Preference number: 2 (lower is better)
Translates to: QFFKVQYCERLMPLKILLMLRAM*LDLTTL
Trigger: TAATGTTGTTAAATCCAGGCACATAGCACGAAGCAT...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR-3UTR GCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAAGATTTGTTAAACTTTaGCTTGGATTATGGCCTCAC +
Preference number: 2 (lower is better)
Translates to: QFFKVQYCERLMPLKILLRFVKL*LGLWPH
Trigger: GTGAGGCCATAATCCAAGGCAAAGTTTAACAAATCT...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR-3UTR CCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAGAGTCAAAATGGGAATaGTTACAACGGATTAACACT +
Preference number: 2 (lower is better)
Translates to: QFFKVQYCERLMPLKILLESKWE*LQRINT
Trigger: AGTGTTAATCCGTTGTAACCATTCCCATTTTGACTC...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR-3UTR CCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAGTTTGTGTGGACCCATaGTATATAGCCCTTATTATT +
Preference number: 2 (lower is better)
Translates to: QFFKVQYCERLMPLKILLVCVDP*YIALII
Trigger: AATAATAAGGGCTATATACCATGGGTCCACACAAAC...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR TCA 72 bp CAGAAGCCTGCACAGTTAAATCCTTCTACATCCTGCTaGAAATGTGCCCTTCGGTGTCAACTTTGCTTGACA +
Preference number: 3 (lower is better)
Translates to: QKPAQLNPSTSC*KCALRCQLCLT
Trigger: TGTCAAGCAAAGTTGACACCGAAGGGCACATTTTCAGCAGGATGTAGAAGGATTTAACTGTGCAGGCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR TCA 72 bp TTCTTTGAGAGCTGCCACACATCCGCAAAGGTTAACTaGTTTCCCTTACCTCATCCAGATTGGTTTTTGAAC +
Preference number: 3 (lower is better)
Translates to: FFESCHTSAKVN*FPLPHPDWFLN
Trigger: GTTCAAAAACCAATCTGGATGAGGTAAGGGAAATCAGTTAACCTTTGCGGATGTGTGGCAGCTCTCAAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511294.1
3UTR-3UTR CAA 90 bp GCTACTGTTACCTTGATATTCATCGTAGAGAGCCAAAATGTACAAATATGTTTGGATGATGAGGCTTCTTaGAGAGCTGCCACACATCCG +
Preference number: 3 (lower is better)
Translates to: ATVTLIFIVESQNVQICLDDEAS*RAATHP
Trigger: CGGATGTGTGGCAGCTCTCAAAGAAGCCTCATCATC...CAAACATATTTGTACATTTTGGCTCTCTACGATGAATATCAAGGTAACAGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
3UTR TCA 72 bp TACAGCAGCCTAAAGAGTCATAGATATGTTGACCACTaGAACTTCTACTGTGAATACAGTTCCCAGCCTGAA +
Preference number: 3 (lower is better)
Translates to: YSSLKSHRYVDH*NFYCEYSSQPE
Trigger: TTCAGGCTGGGAACTGTATTCACAGTAGAAGTTTCAGTGGTCAACATATCTATGACTCTTTAGGCTGCTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR GCA 72 bp TGCACAGTTAAATCCTTCTACATCCTGCTGAAAATGTaGCCTTCGGTGTCAACTTTGCTTGACAAGATACTT +
Preference number: 3 (lower is better)
Translates to: CTVKSFYILLKM*PSVSTLLDKIL
Trigger: AAGTATCTTGTCAAGCAAAGTTGACACCGAAGGGCACATTTTCAGCAGGATGTAGAAGGATTTAACTGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR GCA 72 bp GGTTACAACGGATTAACACTTAAGGGTGATGCTTCGTaGTATGTGCCTGGATTTAACAACATTAACAGAAGC +
Preference number: 3 (lower is better)
Translates to: GYNGLTLKGDAS*YVPGFNNINRS
Trigger: GCTTCTGTTAATGTTGTTAAATCCAGGCACATAGCACGAAGCATCACCCTTAAGTGTTAATCCGTTGTAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR-3UTR CAA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAGTTATGTCTAAGCAATaGTGGCAAGTTCATCAGCCC +
Preference number: 3 (lower is better)
Translates to: QYCERLMPLKILLLAITIVMSKQ*WQVHQP
Trigger: GGGCTGATGAACTTGCCACAATTGCTTAGACATAAC...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR-3UTR CAA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAAGTTGGCTCCTCTCCTaGTTCCATTTCTCACACTTG +
Preference number: 3 (lower is better)
Translates to: QFFKVQYCERLMPLKILLSWLLS*FHFSHL
Trigger: CAAGTGTGAGAAATGGAACAAGGAGAGGAGCCAACT...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR GCA 72 bp GCTATGTGCCTGGATTTAACAACATTAACAGAAGCCTaGACAGTTAAATCCTTCTACATCCTGCTGAAAATG +
Preference number: 3 (lower is better)
Translates to: AMCLDLTTLTEA*TVKSFYILLKM
Trigger: CATTTTCAGCAGGATGTAGAAGGATTTAACTGTGCAGGCTTCTGTTAATGTTGTTAAATCCAGGCACATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR-3UTR CAA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAAGATCCCTGGAAGTTTaGAAAGGGGTTGCCTTAATT +
Preference number: 3 (lower is better)
Translates to: QYCERLMPLKILLLAITIRSLEV*KGVALI
Trigger: AATTAAGGCAACCCCTTTCAAAACTTCCAGGGATCT...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR-3UTR CAA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTATGTTTGCAGCACAGTTaGTGTGGACCCATGGTATAT +
Preference number: 3 (lower is better)
Translates to: QFFKVQYCERLMPLKILLCLQHS*CGPMVY
Trigger: ATATACCATGGGTCCACACAAACTGTGCTGCAAACA...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR-3UTR CAA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATATACATTTTACTAGAGTaGGCTCCTCTCCTTGTTCCA +
Preference number: 3 (lower is better)
Translates to: QYCERLMPLKILLLAITIYILLE*APLLVP
Trigger: TGGAACAAGGAGAGGAGCCAACTCTAGTAAAATGTA...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR-3UTR CAA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAGTCTGTGCTTTATTTTaGGTAGTCTGGTGGGTGACA +
Preference number: 3 (lower is better)
Translates to: QFFKVQYCERLMPLKILLVCALF*VVWWVT
Trigger: TGTCACCCACCAGACTACCAAAAATAAAGCACAGAC...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR-3UTR CAA 90 bp TCCACTGAGATTGTACCAAATAACAAATCAGAGGCGGGATCTGATACATCCTTAGCATTAACCATGCAGTaGTTAACAATACAGGCTAAA +
Preference number: 3 (lower is better)
Translates to: STEIVPNNKSEAGSDTSLALTMQ*LTIQAK
Trigger: TTTAGCCTGTATTGTTAACAACTGCATGGTTAATGC...TAAGGATGTATCAGATCCCGCCTCTGATTTGTTATTTGGTACAATCTCAGTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
3UTR CCA 72 bp ACACAATCAAGATTTGTTAAACTTTGCCTTGGATTATaGCCTCACTACATTTTACTAGAGTTGGCTCCTCTC +
Preference number: 3 (lower is better)
Translates to: TQSRFVKLCLGL*PHYILLELAPL
Trigger: GAGAGGAGCCAACTCTAGTAAAATGTAGTGAGGCCATAATCCAAGGCAAAGTTTAACAAATCTTGATTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR-3UTR CAA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACGGTGTCAACTTTGCTaGACAAGATACTTTTCAGGA +
Preference number: 3 (lower is better)
Translates to: QFFKVQYCERLMPLKILLRCQLC*TRYFSG
Trigger: TCCTGAAAAGTATCTTGTCAAGCAAAGTTGACACCG...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR TCA 72 bp ATGTCTTCAGAAGGTAAATATCTGTGCTTGTGCTTCTaGGAACCCACTTTACATGGCATAAATAATGGTGTT +
Preference number: 3 (lower is better)
Translates to: MSSEGKYLCLCF*EPTLHGINNGV
Trigger: AACACCATTATTTATGCCATGTAAAGTGGGTTCTCAGAAGCACAAGCACAGATATTTACCTTCTGAAGACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR-3UTR CAA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATATACATTCTGGAACACTaGCTCCTATATGTTGCTAAA +
Preference number: 3 (lower is better)
Translates to: ISYRGTRLMARRTALSLIYILEH*LLYVAK
Trigger: TTTAGCAACATATAGGAGCAAGTGTTCCAGAATGTA...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR-3UTR CAA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTATTCCATTTCTCACACTaGCAGATGAGATTGGCATTT +
Preference number: 3 (lower is better)
Translates to: QFFKVQYCERLMPLKILLFHFSH*QMRLAF
Trigger: AAATGCCAATCTCATCTGCAAGTGTGAGAAATGGAA...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR-3UTR CAA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTATACATTCTGGAACACTaGCTCCTATATGTTGCTAAA +
Preference number: 3 (lower is better)
Translates to: QFFKVQYCERLMPLKILLYILEH*LLYVAK
Trigger: TTTAGCAACATATAGGAGCAAGTGTTCCAGAATGTA...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR CCA 72 bp AGATTATATGTTTGCAGCACAGTTTGTGTGGACCCATaGTATATAGCCCTTATTATTATGAGAACTGAATGT +
Preference number: 3 (lower is better)
Translates to: RLYVCSTVCVDP*YIALIIMRTEC
Trigger: ACATTCAGTTCTCATAATAATAAGGGCTATATACCATGGGTCCACACAAACTGTGCTGCAAACATATAATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
3UTR CCA 72 bp TGGACAAAGCATATGTGTTATCAAGTAGATATGATCTaGTGGACCGTGAGAATGAGATTCAGTAAATTTAGA +
Preference number: 3 (lower is better)
Translates to: WTKHMCYQVDMI*WTVRMRFSKFR
Trigger: TCTAAATTTACTGAATCTCATTCTCACGGTCCACCAGATCATATCTACTTGATAACACATATGCTTTGTCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
3UTR CCA 72 bp ACAAAGCATATGTGTTATCAAGTAGATATGATCTGGTaGACCGTGAGAATGAGATTCAGTAAATTTAGAAAG +
Preference number: 3 (lower is better)
Translates to: TKHMCYQVDMIW*TVRMRFSKFRK
Trigger: CTTTCTAAATTTACTGAATCTCATTCTCACGGTCCACCAGATCATATCTACTTGATAACACATATGCTTTGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp TCTTTGAGAGCTGCCACACATCCGCAAAGGTTAACTGATTTCCCTTACCTCATCCCAGGGACGCTGGGGTaGTGGGGGTGTCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SLRAATHPQRLTDFPYLIPGTLG*WGCRRR
Trigger: GCGGCGGCGACACCCCCATCACCCCAGCGTCCCTGG...GATGAGGTAAGGGAAATCAGTTAACCTTTGCGGATGTGTGGCAGCTCTCAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp GGCACAATTGGTTCCACTGAGATTGTACCAAATAACAAATCAGAGGCGGGATCTCGGCCCAGGAGCTGCTaGGGTTCCCGCTGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GTIGSTEIVPNNKSEAGSRPRSC*GSRCSG
Trigger: CCCCGAGCAGCGGGAACCGCAGCAGCTCCTGGGCCG...AGATCCCGCCTCTGATTTGTTATTTGGTACAATCTCAGTGGAACCAATTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACCAGGGACGCTGGGGTaGTGGGGGTGTCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLPGTLG*WGCRRR
Trigger: GCGGCGGCGACACCCCCATCACCCCAGCGTCCCTGG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACCAGGGACGCTGGGGTaGTGGGGGTGTCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEPGTLG*WGCRRR
Trigger: GCGGCGGCGACACCCCCATCACCCCAGCGTCCCTGG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTCCAGGGACGCTGGGGTaGTGGGGGTGTCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFPGTLG*WGCRRR
Trigger: GCGGCGGCGACACCCCCATCACCCCAGCGTCCCTGG...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp AGATACTGGCCACATGTAGCATTAACCATGCAGTTGTTAACAATACAGGCTAAAGCCGGCCAGGGACGCTaGGGTGATGGGGGTGTCGCC +
Preference number: 4 (lower is better)
Translates to: RYWPHVALTMQLLTIQAKAGQGR*GDGGVA
Trigger: GGCGACACCCCCATCACCCCAGCGTCCCTGGCCGGC...TTTAGCCTGTATTGTTAACAACTGCATGGTTAATGCTACATGTGGCCAGTATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACCGAGCCTCCTCCGGTaGCGCTGTCCCGAGCGGCTC +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEPSLLR*RCPERL
Trigger: GAGCCGCTCGGGACAGCGGCACCGGAGGAGGCTCGG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACCGAGCCTCCTCCGGTaGCGCTGTCCCGAGCGGCTC +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLPSLLR*RCPERL
Trigger: GAGCCGCTCGGGACAGCGGCACCGGAGGAGGCTCGG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATACCGAGCCTCCTCCGGTaGCGCTGTCCCGAGCGGCTC +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIPSLLR*RCPERL
Trigger: GAGCCGCTCGGGACAGCGGCACCGGAGGAGGCTCGG...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATACGGCCCAGGAGCTGCTaGGGTTCCCGCTGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIRPRSC*GSRCSG
Trigger: CCCCGAGCAGCGGGAACCGCAGCAGCTCCTGGGCCG...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACGGCGGCCCAGGAGCTaGTGCGGTTCCCGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHERRPRS*CGSRCS
Trigger: CGAGCAGCGGGAACCGCAGCAGCTCCTGGGCCGCCG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGTAGGAGCGCGGAGCTaGGCTGCGGCGGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLVGARS*AAAAQE
Trigger: CTCCTGGGCCGCCGCAGCGCAGCTCCGCGCTCCTAC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTGTAGGAGCGCGGAGCTaGGCTGCGGCGGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFVGARS*AAAAQE
Trigger: CTCCTGGGCCGCCGCAGCGCAGCTCCGCGCTCCTAC...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATAGCCGGCCAGGGACGCTaGGGTGATGGGGGTGTCGCC +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIAGQGR*GDGGVA
Trigger: GGCGACACCCCCATCACCCCAGCGTCCCTGGCCGGC...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTGCCGGCCAGGGACGCTaGGGTGATGGGGGTGTCGCC +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFAGQGR*GDGGVA
Trigger: GGCGACACCCCCATCACCCCAGCGTCCCTGGCCGGC...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGCCGGCCAGGGACGCTaGGGTGATGGGGGTGTCGCC +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLAGQGR*GDGGVA
Trigger: GGCGACACCCCCATCACCCCAGCGTCCCTGGCCGGC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GCTACTGTTACCTTGATATTCATCGTAGAGAGCCAAAATGTACAAATATGTTTGCCGAGCCTCCTCCGGTaGCGCTGTCCCGAGCGGCTC +
Preference number: 4 (lower is better)
Translates to: ATVTLIFIVESQNVQICLPSLLR*RCPERL
Trigger: GAGCCGCTCGGGACAGCGGCACCGGAGGAGGCTCGG...CAAACATATTTGTACATTTTGGCTCTCTACGATGAATATCAAGGTAACAGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp GTTATCGGTATGAAGGAAGAGAATGCTGAGAATGTGACATTAATTGGTGATAAACGGCGGCCCAGGAGCTaGTGCGGTTCCCGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: VIGMKEENAENVTLIGDKRRPRS*CGSRCS
Trigger: CGAGCAGCGGGAACCGCAGCAGCTCCTGGGCCGCCG...TTTATCACCAATTAATGTCACATTCTCAGCATTCTCTTCCTTCATACCGATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACGGCGGCCCAGGAGCTaGTGCGGTTCCCGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLRRPRS*CGSRCS
Trigger: CGAGCAGCGGGAACCGCAGCAGCTCCTGGGCCGCCG...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GTCCTTTTAGTTATCGGTATGAAGGAAGAGAATGCTGAGAATGTGACATTAATTGTAGGAGCGCGGAGCTaGGCTGCGGCGGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: VLLVIGMKEENAENVTLIVGARS*AAAAQE
Trigger: CTCCTGGGCCGCCGCAGCGCAGCTCCGCGCTCCTAC...AATTAATGTCACATTCTCAGCATTCTCTTCCTTCATACCGATAACTAAAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAGCCGGCCAGGGACGCTaGGGTGATGGGGGTGTCGCC +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLAGQGR*GDGGVA
Trigger: GGCGACACCCCCATCACCCCAGCGTCCCTGGCCGGC...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAGGGAGCCCGTCGAGGTaGAGAGTAGCAGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIGSPSR*RVAAGQ
Trigger: CTGGCCGGCTGCTACTCTGCACCTCGACGGGCTCCC...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAGGGAGCCCGTCGAGGTaGAGAGTAGCAGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEGSPSR*RVAAGQ
Trigger: CTGGCCGGCTGCTACTCTGCACCTCGACGGGCTCCC...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp AATATGTTTGGTCCTTATGTAGGACTAGCCACACCAATTGTGCTTACAGTTTATGGGAGCCCGTCGAGGTaGAGAGTAGCAGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: NMFGPYVGLATPIVLTVYGSPSR*RVAAGQ
Trigger: CTGGCCGGCTGCTACTCTGCACCTCGACGGGCTCCC...ATAAACTGTAAGCACAATTGGTGTGGCTAGTCCTACATAAGGACCAAACATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp TCTTTGAGAGCTGCCACACATCCGCAAAGGTTAACTGATTTCCCTTACCTCATCCCTTCGGCGCTGCAGTaGATTTTGGGAGGTTCATCG +
Preference number: 4 (lower is better)
Translates to: SLRAATHPQRLTDFPYLIPSALQ*ILGGSS
Trigger: CGATGAACCTCCCAAAATGCACTGCAGCGCCGAAGG...GATGAGGTAAGGGAAATCAGTTAACCTTTGCGGATGTGTGGCAGCTCTCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGGAGCAGGCGGTGTGTaGGCGGCTGCGAAGTCGAGG +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLGAGGV*AAAKSR
Trigger: CCTCGACTTCGCAGCCGCGCACACACCGCCTGCTCC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATAGGAGCAGGCGGTGTGTaGGCGGCTGCGAAGTCGAGG +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIGAGGV*AAAKSR
Trigger: CCTCGACTTCGCAGCCGCGCACACACCGCCTGCTCC...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GATATGATCTGGTGGACCGTGAGAATGAGATTCAGTAAATTTAGAAAGCAAGCTCTTCGTTGCTGGGGCTaGCCAGGAGGGTCCGGAGTG +
Preference number: 4 (lower is better)
Translates to: DMIWWTVRMRFSKFRKQALRCWG*PGGSGV
Trigger: CACTCCGGACCCTCCTGGCCAGCCCCAGCAACGAAG...AGCTTGCTTTCTAAATTTACTGAATCTCATTCTCACGGTCCACCAGATCATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp ACAATACAGGCTAAAGATGATGAGGCTTCTTTGAGAGCTGCCACACATCCGCAAGTTGACACAGGAGCCTaGCACTTCGAGCAATTGGGA +
Preference number: 4 (lower is better)
Translates to: TIQAKDDEASLRAATHPQVDTGA*HFEQLG
Trigger: TCCCAATTGCTCGAAGTGTCAGGCTCCTGTGTCAAC...TTGCGGATGTGTGGCAGCTCTCAAAGAAGCCTCATCATCTTTAGCCTGTATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp GCTGAGTGGTTGGTTTCAGGTCCTTTTAGTTATCGGTATGAAGGAAGAGAATGCCCGCAGCTCTGGATGTaGGGTGAGGCTTTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: AEWLVSGPFSYRYEGRECPQLWM*GEALKN
Trigger: GTTCTTCAAAGCCTCACCTCACATCCAGAGCTGCGG...GCATTCTCTTCCTTCATACCGATAACTAAAAGGACCTGAAACCAACCACTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp GTTCCACTGAGATTGTACCAAATAACAAATCAGAGGCGGGATCTGATACATCCTGGAAGGTACCTGACATaGCCGCCACACTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: VPLRLYQITNQRRDLIHPGRYLT*PPHSSH
Trigger: GTGTGAGGAGTGTGGCGGTCATGTCAGGTACCTTCC...AGGATGTATCAGATCCCGCCTCTGATTTGTTATTTGGTACAATCTCAGTGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp ATGGACAAAGCATATGTGTTATCAAGTAGATATGATCTGGTGGACCGTGAGAATGCCGGGGAAGGTACCTaGCATGACCGCCACACTCCT +
Preference number: 4 (lower is better)
Translates to: MDKAYVLSSRYDLVDRENAGEGT*HDRHTP
Trigger: AGGAGTGTGGCGGTCATGTCAGGTACCTTCCCCGGC...ATTCTCACGGTCCACCAGATCATATCTACTTGATAACACATATGCTTTGTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAGGGAGCCCGTCGAGGTaGAGAGTAGCAGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLGSPSR*RVAAGQ
Trigger: CTGGCCGGCTGCTACTCTGCACCTCGACGGGCTCCC...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTCAGGAGGGTCCGGAGTaGGGCGCACAGGAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFQEGPE*GAQEKA
Trigger: TGCCTTCTCCTGTGCGCCGCACTCCGGACCCTCCTG...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACAGGAGGGTCCGGAGTaGGGCGCACAGGAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLQEGPE*GAQEKA
Trigger: TGCCTTCTCCTGTGCGCCGCACTCCGGACCCTCCTG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACAGGAGGGTCCGGAGTaGGGCGCACAGGAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEQEGPE*GAQEKA
Trigger: TGCCTTCTCCTGTGCGCCGCACTCCGGACCCTCCTG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATACAGGAGGGTCCGGAGTaGGGCGCACAGGAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIQEGPE*GAQEKA
Trigger: TGCCTTCTCCTGTGCGCCGCACTCCGGACCCTCCTG...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp TATCAAGTAGATATGATCTGGTGGACCGTGAGAATGAGATTCAGTAAATTTAGAGGAGCAGGCGGTGTGTaGGCGGCTGCGAAGTCGAGG +
Preference number: 4 (lower is better)
Translates to: YQVDMIWWTVRMRFSKFRGAGGV*AAAKSR
Trigger: CCTCGACTTCGCAGCCGCGCACACACCGCCTGCTCC...TCTAAATTTACTGAATCTCATTCTCACGGTCCACCAGATCATATCTACTTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTCTTCGTTGCTGGGGCTaGCCAGGAGGGTCCGGAGTG +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFLRCWG*PGGSGV
Trigger: CACTCCGGACCCTCCTGGCCAGCCCCAGCAACGAAG...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACTTCGTTGCTGGGGCTaGCCAGGAGGGTCCGGAGTG +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLLRCWG*PGGSGV
Trigger: CACTCCGGACCCTCCTGGCCAGCCCCAGCAACGAAG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GGCACAATTGGTTCCACTGAGATTGTACCAAATAACAAATCAGAGGCGGGATCTCCACTAGGGGAAAGGTaGAGGTTCTTTGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: GTIGSTEIVPNNKSEAGSPLGER*RFFAAF
Trigger: GAAGGCTGCAAAGAACCTTCACCTTTCCCCTAGTGG...AGATCCCGCCTCTGATTTGTTATTTGGTACAATCTCAGTGGAACCAATTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp TCTTTGAGAGCTGCCACACATCCGCAAAGGTTAACTGATTTCCCTTACCTCATCAAGAATCAGCTCCAGTaGTGGTGTCAGGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: SLRAATHPQRLTDFPYLIKNQLQ*WCQGRQ
Trigger: CTGTCTTCCCTGACACCATCACTGGAGCTGATTCTT...GATGAGGTAAGGGAAATCAGTTAACCTTTGCGGATGTGTGGCAGCTCTCAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAGCCGGGGAAGGTACCTaGCATGACCGCCACACTCCT +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIAGEGT*HDRHTP
Trigger: AGGAGTGTGGCGGTCATGTCAGGTACCTTCCCCGGC...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTGCCGGGGAAGGTACCTaGCATGACCGCCACACTCCT +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFAGEGT*HDRHTP
Trigger: AGGAGTGTGGCGGTCATGTCAGGTACCTTCCCCGGC...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAGCCGGGGAAGGTACCTaGCATGACCGCCACACTCCT +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEAGEGT*HDRHTP
Trigger: AGGAGTGTGGCGGTCATGTCAGGTACCTTCCCCGGC...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp AGATACTGGCCACATGTAGCATTAACCATGCAGTTGTTAACAATACAGGCTAAACTGCGAAGTCGAGGTTaGAACTGCACCGCCAAGGCG +
Preference number: 4 (lower is better)
Translates to: RYWPHVALTMQLLTIQAKLRSRG*NCTAKA
Trigger: CGCCTTGGCGGTGCAGTTTCAACCTCGACTTCGCAG...TTTAGCCTGTATTGTTAACAACTGCATGGTTAATGCTACATGTGGCCAGTATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp GTTCCACTGAGATTGTACCAAATAACAAATCAGAGGCGGGATCTGATACATCCTCACTCCAAGGTCACCTaGGCCACAGCGTCCATTGAA +
Preference number: 4 (lower is better)
Translates to: VPLRLYQITNQRRDLIHPHSKVT*ATASIE
Trigger: TTCAATGGACGCTGTGGCTCAGGTGACCTTGGAGTG...AGGATGTATCAGATCCCGCCTCTGATTTGTTATTTGGTACAATCTCAGTGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp GCTGAGTGGTTGGTTTCAGGTCCTTTTAGTTATCGGTATGAAGGAAGAGAATGCGAGACAGCTGAAGTTTaGTTCTGGCTCCTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: AEWLVSGPFSYRYEGRECETAEV*FWLLSP
Trigger: AGGCGAGAGGAGCCAGAAGCAAACTTCAGCTGTCTC...GCATTCTCTTCCTTCATACCGATAACTAAAAGGACCTGAAACCAACCACTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp TATCAAGTAGATATGATCTGGTGGACCGTGAGAATGAGATTCAGTAAATTTAGACAGGAGGGTCCGGAGTaGGGCGCACAGGAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: YQVDMIWWTVRMRFSKFRQEGPE*GAQEKA
Trigger: TGCCTTCTCCTGTGCGCCGCACTCCGGACCCTCCTG...TCTAAATTTACTGAATCTCATTCTCACGGTCCACCAGATCATATCTACTTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACAGGAGGGTCCGGAGTaGGGCGCACAGGAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLQEGPE*GAQEKA
Trigger: TGCCTTCTCCTGTGCGCCGCACTCCGGACCCTCCTG...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GATATGATCTGGTGGACCGTGAGAATGAGATTCAGTAAATTTAGAAAGCAAGCTGGGTCCTACGCCTTCTaGCACGCGGCTCCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: DMIWWTVRMRFSKFRKQAGSYAF*HAAPPN
Trigger: ATTTGGAGGAGCCGCGTGCCAGAAGGCGTAGGACCC...AGCTTGCTTTCTAAATTTACTGAATCTCATTCTCACGGTCCACCAGATCATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp ATGGACAAAGCATATGTGTTATCAAGTAGATATGATCTGGTGGACCGTGAGAATATACTGCCGGGCTCCTaGGCTCAAGTCGGACACTCC +
Preference number: 4 (lower is better)
Translates to: MDKAYVLSSRYDLVDRENILPGS*AQVGHS
Trigger: GGAGTGTCCGACTTGAGCCCAGGAGCCCGGCAGTAT...ATTCTCACGGTCCACCAGATCATATCTACTTGATAACACATATGCTTTGTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACTGCGAAGTCGAGGTTaGAACTGCACCGCCAAGGCG +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHELRSRG*NCTAKA
Trigger: CGCCTTGGCGGTGCAGTTTCAACCTCGACTTCGCAG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ACAATACAGGCTAAAGATGATGAGGCTTCTTTGAGAGCTGCCACACATCCGCAAGCCTGCTGCTGTACGTaGTCGAATTTGGAAGACATA +
Preference number: 4 (lower is better)
Translates to: TIQAKDDEASLRAATHPQACCCT*SNLEDI
Trigger: TATGTCTTCCAAATTCGAGCACGTACAGCAGCAGGC...TTGCGGATGTGTGGCAGCTCTCAAAGAAGCCTCATCATCTTTAGCCTGTATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp GGCACAATTGGTTCCACTGAGATTGTACCAAATAACAAATCAGAGGCGGGATCTGACACCATAGCCTGCTaGTGTACGTGCTCGAATTTG +
Preference number: 4 (lower is better)
Translates to: GTIGSTEIVPNNKSEAGSDTIAC*CTCSNL
Trigger: CAAATTCGAGCACGTACAGCAGCAGGCTATGGTGTC...AGATCCCGCCTCTGATTTGTTATTTGGTACAATCTCAGTGGAACCAATTGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp GGCACAATTGGTTCCACTGAGATTGTACCAAATAACAAATCAGAGGCGGGATCTGAAGACACCATAGCCTaGTGCTGTACGTGCTCGAAT +
Preference number: 4 (lower is better)
Translates to: GTIGSTEIVPNNKSEAGSEDTIA*CCTCSN
Trigger: ATTCGAGCACGTACAGCAGCAGGCTATGGTGTCTTC...AGATCCCGCCTCTGATTTGTTATTTGGTACAATCTCAGTGGAACCAATTGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp ACAATACAGGCTAAAGATGATGAGGCTTCTTTGAGAGCTGCCACACATCCGCAACATCAAACTTGGGCCTaGTATTTCGCTCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: TIQAKDDEASLRAATHPQHQTWA*YFALSA
Trigger: GGCAGAAAGAGCGAAATAGCAGGCCCAAGTTTGATG...TTGCGGATGTGTGGCAGCTCTCAAAGAAGCCTCATCATCTTTAGCCTGTATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp AGATACTGGCCACATGTAGCATTAACCATGCAGTTGTTAACAATACAGGCTAAAGCTGAAGTTTGCTTCTaGCTCCTCTCGCCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: RYWPHVALTMQLLTIQAKAEVCF*LLSPPP
Trigger: AGGGGGAGGCGAGAGGAGCCAGAAGCAAACTTCAGC...TTTAGCCTGTATTGTTAACAACTGCATGGTTAATGCTACATGTGGCCAGTATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAGGGTCCTACGCCTTCTaGCACGCGGCTCCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEGSYAF*HAAPPN
Trigger: ATTTGGAGGAGCCGCGTGCCAGAAGGCGTAGGACCC...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTGGGTCCTACGCCTTCTaGCACGCGGCTCCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFGSYAF*HAAPPN
Trigger: ATTTGGAGGAGCCGCGTGCCAGAAGGCGTAGGACCC...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGGGTCCTACGCCTTCTaGCACGCGGCTCCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLGSYAF*HAAPPN
Trigger: ATTTGGAGGAGCCGCGTGCCAGAAGGCGTAGGACCC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATGGACAAAGCATATGTGTTATCAAGTAGATATGATCTGGTGGACCGTGAGAATAATTCACTTCGTTGCTaGGGCTGGCCAGGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: MDKAYVLSSRYDLVDRENNSLRC*GWPGGS
Trigger: GGACCCTCCTGGCCAGCCCCAGCAACGAAGTGAATT...ATTCTCACGGTCCACCAGATCATATCTACTTGATAACACATATGCTTTGTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp GCTGAGTGGTTGGTTTCAGGTCCTTTTAGTTATCGGTATGAAGGAAGAGAATGCGCATGCCATTGTGGGTaGATCAGACTCTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: AEWLVSGPFSYRYEGRECACHCG*IRLSPE
Trigger: TTCAGGAGAGAGTCTGATCCACCCACAATGGCATGC...GCATTCTCTTCCTTCATACCGATAACTAAAAGGACCTGAAACCAACCACTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp GGCACAATTGGTTCCACTGAGATTGTACCAAATAACAAATCAGAGGCGGGATCTTTGTGCATGCCATTGTaGGTGGATCAGACTCTCTCC +
Preference number: 4 (lower is better)
Translates to: GTIGSTEIVPNNKSEAGSLCMPL*VDQTLS
Trigger: GGAGAGAGTCTGATCCACCCACAATGGCATGCACAA...AGATCCCGCCTCTGATTTGTTATTTGGTACAATCTCAGTGGAACCAATTGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATAATACTGCCGGGCTCCTaGGCTCAAGTCGGACACTCC +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIILPGS*AQVGHS
Trigger: GGAGTGTCCGACTTGAGCCCAGGAGCCCGGCAGTAT...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAATACTGCCGGGCTCCTaGGCTCAAGTCGGACACTCC +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEILPGS*AQVGHS
Trigger: GGAGTGTCCGACTTGAGCCCAGGAGCCCGGCAGTAT...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAGGAAGGTACCTGACATaGCCGCCACACTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEGRYLT*PPHSSH
Trigger: GTGTGAGGAGTGTGGCGGTCATGTCAGGTACCTTCC...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTGGAAGGTACCTGACATaGCCGCCACACTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFGRYLT*PPHSSH
Trigger: GTGTGAGGAGTGTGGCGGTCATGTCAGGTACCTTCC...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAGGAAGGTACCTGACATaGCCGCCACACTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIGRYLT*PPHSSH
Trigger: GTGTGAGGAGTGTGGCGGTCATGTCAGGTACCTTCC...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GCTGAGTGGTTGGTTTCAGGTCCTTTTAGTTATCGGTATGAAGGAAGAGAATGCACTCAAATCTTCGACTaGAGACACCATAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: AEWLVSGPFSYRYEGRECTQIFD*RHHSLL
Trigger: CAGCAGGCTATGGTGTCTTCAGTCGAAGATTTGAGT...GCATTCTCTTCCTTCATACCGATAACTAAAAGGACCTGAAACCAACCACTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGCGAAGTCGAGGTTaGAACTGCACCGCCAAGGCG +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLLRSRG*NCTAKA
Trigger: CGCCTTGGCGGTGCAGTTTCAACCTCGACTTCGCAG...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ACAATACAGGCTAAAGATGATGAGGCTTCTTTGAGAGCTGCCACACATCCGCAAGATCTTGTTTTGCTTTaGTGTAGCCACACCGCCATA +
Preference number: 4 (lower is better)
Translates to: TIQAKDDEASLRAATHPQDLVLL*CSHTAI
Trigger: TATGGCGGTGTGGCTACAGCAAAGCAAAACAAGATC...TTGCGGATGTGTGGCAGCTCTCAAAGAAGCCTCATCATCTTTAGCCTGTATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp GTATGCCAATGTTATTTGTTTGAAGCAAAGAAGCAAAGATACTGGCCACATGTACGGTGTGTGCGCGGCTaGGAAGTCGAGGTTGAAACT +
Preference number: 4 (lower is better)
Translates to: VCQCYLFEAKKQRYWPHVRCVRG*EVEVET
Trigger: AGTTTCAACCTCGACTTCGCAGCCGCGCACACACCG...TACATGTGGCCAGTATCTTTGCTTCTTTGCTTCAAACAAATAACATTGGCATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATACGGTGTGTGCGCGGCTaGGAAGTCGAGGTTGAAACT +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIRCVRG*EVEVET
Trigger: AGTTTCAACCTCGACTTCGCAGCCGCGCACACACCG...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACGGTGTGTGCGCGGCTaGGAAGTCGAGGTTGAAACT +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLRCVRG*EVEVET
Trigger: AGTTTCAACCTCGACTTCGCAGCCGCGCACACACCG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAGCTGAAGTTTGCTTCTaGCTCCTCTCGCCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEAEVCF*LLSPPP
Trigger: AGGGGGAGGCGAGAGGAGCCAGAAGCAAACTTCAGC...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAGCTGAAGTTTGCTTCTaGCTCCTCTCGCCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIAEVCF*LLSPPP
Trigger: AGGGGGAGGCGAGAGGAGCCAGAAGCAAACTTCAGC...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAAATTCACTTCGTTGCTaGGGCTGGCCAGGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHENSLRC*GWPGGS
Trigger: GGACCCTCCTGGCCAGCCCCAGCAACGAAGTGAATT...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAAATTCACTTCGTTGCTaGGGCTGGCCAGGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLNSLRC*GWPGGS
Trigger: GGACCCTCCTGGCCAGCCCCAGCAACGAAGTGAATT...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATAAATTCACTTCGTTGCTaGGGCTGGCCAGGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLINSLRC*GWPGGS
Trigger: GGACCCTCCTGGCCAGCCCCAGCAACGAAGTGAATT...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAAATTCACTTCGTTGCTaGGGCTGGCCAGGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITINSLRC*GWPGGS
Trigger: GGACCCTCCTGGCCAGCCCCAGCAACGAAGTGAATT...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GCTGAGTGGTTGGTTTCAGGTCCTTTTAGTTATCGGTATGAAGGAAGAGAATGCGAAAGCTATTGCTTCTaGGGCAGTCCATCTGATTGG +
Preference number: 4 (lower is better)
Translates to: AEWLVSGPFSYRYEGRECESYCF*GSPSDW
Trigger: CCAATCAGATGGACTGCCCCAGAAGCAATAGCTTTC...GCATTCTCTTCCTTCATACCGATAACTAAAAGGACCTGAAACCAACCACTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp ATAATGGACAAAGCATATGTGTTATCAAGTAGATATGATCTGGTGGACCGTGAGATCCCAGGTCCCCCATaGCAGTGCGTGAATCCAATA +
Preference number: 4 (lower is better)
Translates to: IMDKAYVLSSRYDLVDREIPGPP*QCVNPI
Trigger: TATTGGATTCACGCACTGTCATGGGGGACCTGGGAT...CTCACGGTCCACCAGATCATATCTACTTGATAACACATATGCTTTGTCCATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp AGATACTGGCCACATGTAGCATTAACCATGCAGTTGTTAACAATACAGGCTAAATGTGAGGTGAGGCTTTaGAGAACCCAGGTCTGCACA +
Preference number: 4 (lower is better)
Translates to: RYWPHVALTMQLLTIQAKCEVRL*RTQVCT
Trigger: TGTGCAGACCTGGGTTCTTCAAAGCCTCACCTCACA...TTTAGCCTGTATTGTTAACAACTGCATGGTTAATGCTACATGTGGCCAGTATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATAGCTCTGGATGTGAGGTaGGGCTTTGAAGAACCCAGG +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIALDVR*GFEEPR
Trigger: CCTGGGTTCTTCAAAGCCTCACCTCACATCCAGAGC...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGCTCTGGATGTGAGGTaGGGCTTTGAAGAACCCAGG +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLALDVR*GFEEPR
Trigger: CCTGGGTTCTTCAAAGCCTCACCTCACATCCAGAGC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GTATGCCAATGTTATTTGTTTGAAGCAAAGAAGCAAAGATACTGGCCACATGTAGCTCTGGATGTGAGGTaGGGCTTTGAAGAACCCAGG +
Preference number: 4 (lower is better)
Translates to: VCQCYLFEAKKQRYWPHVALDVR*GFEEPR
Trigger: CCTGGGTTCTTCAAAGCCTCACCTCACATCCAGAGC...TACATGTGGCCAGTATCTTTGCTTCTTTGCTTCAAACAAATAACATTGGCATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATACCGCAGCTCTGGATGTaGGGTGAGGCTTTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIPQLWM*GEALKN
Trigger: GTTCTTCAAAGCCTCACCTCACATCCAGAGCTGCGG...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACCGCAGCTCTGGATGTaGGGTGAGGCTTTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLPQLWM*GEALKN
Trigger: GTTCTTCAAAGCCTCACCTCACATCCAGAGCTGCGG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GGCACAATTGGTTCCACTGAGATTGTACCAAATAACAAATCAGAGGCGGGATCTTTGGAAGACATAAACTaGAGCTGGTTTCAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: GTIGSTEIVPNNKSEAGSLEDIN*SWFQAL
Trigger: GAGGGCTTGAAACCAGCTTCAGTTTATGTCTTCCAA...AGATCCCGCCTCTGATTTGTTATTTGGTACAATCTCAGTGGAACCAATTGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATATCCTCCAAGGTCACCTaGGCCACAGCGTCCATTGAA +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLISSKVT*ATASIE
Trigger: TTCAATGGACGCTGTGGCTCAGGTGACCTTGGAGGA...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATCCTCCAAGGTCACCTaGGCCACAGCGTCCATTGAA +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLSSKVT*ATASIE
Trigger: TTCAATGGACGCTGTGGCTCAGGTGACCTTGGAGGA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTTCCTCCAAGGTCACCTaGGCCACAGCGTCCATTGAA +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFSSKVT*ATASIE
Trigger: TTCAATGGACGCTGTGGCTCAGGTGACCTTGGAGGA...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GGCACAATTGGTTCCACTGAGATTGTACCAAATAACAAATCAGAGGCGGGATCTTCCGCAAAGGTTAACTaGTTTCCCTTACCTCATCCA +
Preference number: 4 (lower is better)
Translates to: GTIGSTEIVPNNKSEAGSSAKVN*FPLPHP
Trigger: TGGATGAGGTAAGGGAAATCAGTTAACCTTTGCGGA...AGATCCCGCCTCTGATTTGTTATTTGGTACAATCTCAGTGGAACCAATTGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACCTTCGGCGCTGCAGTaGATTTTGGGAGGTTCATCG +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLPSALQ*ILGGSS
Trigger: CGATGAACCTCCCAAAATGCACTGCAGCGCCGAAGG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTCCTTCGGCGCTGCAGTaGATTTTGGGAGGTTCATCG +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFPSALQ*ILGGSS
Trigger: CGATGAACCTCCCAAAATGCACTGCAGCGCCGAAGG...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATACCTTCGGCGCTGCAGTaGATTTTGGGAGGTTCATCG +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIPSALQ*ILGGSS
Trigger: CGATGAACCTCCCAAAATGCACTGCAGCGCCGAAGG...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACTCCCCTTCGGCGCTaGAGTGCATTTTGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFTPLRR*SAFWEV
Trigger: AACCTCCCAAAATGCACTGCAGCGCCGAAGGGGAGT...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAACTCCCCTTCGGCGCTaGAGTGCATTTTGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLTPLRR*SAFWEV
Trigger: AACCTCCCAAAATGCACTGCAGCGCCGAAGGGGAGT...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GTATGCCAATGTTATTTGTTTGAAGCAAAGAAGCAAAGATACTGGCCACATGTAACTCCCCTTCGGCGCTaGAGTGCATTTTGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: VCQCYLFEAKKQRYWPHVTPLRR*SAFWEV
Trigger: AACCTCCCAAAATGCACTGCAGCGCCGAAGGGGAGT...TACATGTGGCCAGTATCTTTGCTTCTTTGCTTCAAACAAATAACATTGGCATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp ACAATACAGGCTAAAGATGATGAGGCTTCTTTGAGAGCTGCCACACATCCGCAAAAGGTACTTCATTCCTaGAGAGATACCTCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: TIQAKDDEASLRAATHPQKVLHS*RDTSQH
Trigger: ATGCTGAGAGGTATCTCTGCAGGAATGAAGTACCTT...TTGCGGATGTGTGGCAGCTCTCAAAGAAGCCTCATCATCTTTAGCCTGTATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACCTTGTGGTGTAGGCTaGCTCGGGATCATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEPCGVG*LGIIFQ
Trigger: CTGGAAGATGATCCCGAGGCAGCCTACACCACAAGG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACCTTGTGGTGTAGGCTaGCTCGGGATCATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLPCGVG*LGIIFQ
Trigger: CTGGAAGATGATCCCGAGGCAGCCTACACCACAAGG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATACCTTGTGGTGTAGGCTaGCTCGGGATCATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIPCGVG*LGIIFQ
Trigger: CTGGAAGATGATCCCGAGGCAGCCTACACCACAAGG...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATAGTGTCGAGAGGGTCCTaGGTCCTGTTCCTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIVSRGS*VLFLCL
Trigger: AAGGCAAAGGAACAGGACCCAGGACCCTCTCGACAC...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAGCTGAAGTTTGCTTCTaGCTCCTCTCGCCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLAEVCF*LLSPPP
Trigger: AGGGGGAGGCGAGAGGAGCCAGAAGCAAACTTCAGC...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp CCACATGTAGCATTAACCATGCAGTTGTTAACAATACAGGCTAAAGATGATGAGCGCTGCAGTGCATTTTaGGAGGTTCATCGGTCACAG +
Preference number: 4 (lower is better)
Translates to: PHVALTMQLLTIQAKDDERCSAF*EVHRSQ
Trigger: CTGTGACCGATGAACCTCCCAAAATGCACTGCAGCG...CTCATCATCTTTAGCCTGTATTGTTAACAACTGCATGGTTAATGCTACATGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp GCTGAGTGGTTGGTTTCAGGTCCTTTTAGTTATCGGTATGAAGGAAGAGAATGCTCCATTGGGACGATCTaGTTCTTGCCAAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: AEWLVSGPFSYRYEGRECSIGTI*FLPRQR
Trigger: TCTTTGTCTTGGCAAGAACCAGATCGTCCCAATGGA...GCATTCTCTTCCTTCATACCGATAACTAAAAGGACCTGAAACCAACCACTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp GATATGATCTGGTGGACCGTGAGAATGAGATTCAGTAAATTTAGAAAGCAAGCTTTTTTCCTCCCCTTGTaGTGTAGGCTGCCTCGGGAT +
Preference number: 4 (lower is better)
Translates to: DMIWWTVRMRFSKFRKQAFFLPL*CRLPRD
Trigger: ATCCCGAGGCAGCCTACACCACAAGGGGAGGAAAAA...AGCTTGCTTTCTAAATTTACTGAATCTCATTCTCACGGTCCACCAGATCATATC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp CCACATGTAGCATTAACCATGCAGTTGTTAACAATACAGGCTAAAGATGATGAGACAATCCATGGGGCTTaGCAGACGATAGCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PHVALTMQLLTIQAKDDETIHGA*QTIAFL
Trigger: GAGGAAGGCTATCGTCTGCCAAGCCCCATGGATTGT...CTCATCATCTTTAGCCTGTATTGTTAACAACTGCATGGTTAATGCTACATGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTCAGCAGGACAATCCATaGGGCTTGGCAGACGATAGC +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFQQDNP*GLADDS
Trigger: GCTATCGTCTGCCAAGCCCCATGGATTGTCCTGCTG...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACAGCAGGACAATCCATaGGGCTTGGCAGACGATAGC +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEQQDNP*GLADDS
Trigger: GCTATCGTCTGCCAAGCCCCATGGATTGTCCTGCTG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp TTTGGTCCTTATGTAGGACTAGCCACACCAATTGTGCTTACAGTTTATTTTGTTCAGCAGGACAATCCATaGGGCTTGGCAGACGATAGC +
Preference number: 4 (lower is better)
Translates to: FGPYVGLATPIVLTVYFVQQDNP*GLADDS
Trigger: GCTATCGTCTGCCAAGCCCCATGGATTGTCCTGCTG...AACAAAATAAACTGTAAGCACAATTGGTGTGGCTAGTCCTACATAAGGACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATACAGCAGGACAATCCATaGGGCTTGGCAGACGATAGC +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIQQDNP*GLADDS
Trigger: GCTATCGTCTGCCAAGCCCCATGGATTGTCCTGCTG...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACAGCAGGACAATCCATaGGGCTTGGCAGACGATAGC +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLQQDNP*GLADDS
Trigger: GCTATCGTCTGCCAAGCCCCATGGATTGTCCTGCTG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GCTGAGTGGTTGGTTTCAGGTCCTTTTAGTTATCGGTATGAAGGAAGAGAATGCCGTCTTCAGACTACTTaGGTTACGTATCAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: AEWLVSGPFSYRYEGRECRLQTT*VTYQLV
Trigger: GACAAGCTGATACGTAACCCAAGTAGTCTGAAGACG...GCATTCTCTTCCTTCATACCGATAACTAAAAGGACCTGAAACCAACCACTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTCCACTAGGGGAAAGGTaGAGGTTCTTTGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFPLGER*RFFAAF
Trigger: GAAGGCTGCAAAGAACCTTCACCTTTCCCCTAGTGG...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATACCACTAGGGGAAAGGTaGAGGTTCTTTGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIPLGER*RFFAAF
Trigger: GAAGGCTGCAAAGAACCTTCACCTTTCCCCTAGTGG...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACCACTAGGGGAAAGGTaGAGGTTCTTTGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLPLGER*RFFAAF
Trigger: GAAGGCTGCAAAGAACCTTCACCTTTCCCCTAGTGG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATCCCAGGTCCCCCATaGCAGTGCGTGAATCCAATA +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFIPGPP*QCVNPI
Trigger: TATTGGATTCACGCACTGTCATGGGGGACCTGGGAT...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAATCCCAGGTCCCCCATaGCAGTGCGTGAATCCAATA +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEIPGPP*QCVNPI
Trigger: TATTGGATTCACGCACTGTCATGGGGGACCTGGGAT...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAATCCCAGGTCCCCCATaGCAGTGCGTGAATCCAATA +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLIPGPP*QCVNPI
Trigger: TATTGGATTCACGCACTGTCATGGGGGACCTGGGAT...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAATCCCAGGTCCCCCATaGCAGTGCGTGAATCCAATA +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIIPGPP*QCVNPI
Trigger: TATTGGATTCACGCACTGTCATGGGGGACCTGGGAT...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTGTTGACACAGGAGCCTaGCACTTCGAGCAATTGGGA +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFVDTGA*HFEQLG
Trigger: TCCCAATTGCTCGAAGTGTCAGGCTCCTGTGTCAAC...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGTTGACACAGGAGCCTaGCACTTCGAGCAATTGGGA +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLVDTGA*HFEQLG
Trigger: TCCCAATTGCTCGAAGTGTCAGGCTCCTGTGTCAAC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAGTTGACACAGGAGCCTaGCACTTCGAGCAATTGGGA +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEVDTGA*HFEQLG
Trigger: TCCCAATTGCTCGAAGTGTCAGGCTCCTGTGTCAAC...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATACGGTCACAGAATGGTTaGCACAGGAGCCTGACACTT +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIRSQNG*HRSLTL
Trigger: AAGTGTCAGGCTCCTGTGTCAACCATTCTGTGACCG...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTCGGTCACAGAATGGTTaGCACAGGAGCCTGACACTT +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFRSQNG*HRSLTL
Trigger: AAGTGTCAGGCTCCTGTGTCAACCATTCTGTGACCG...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACGGTCACAGAATGGTTaGCACAGGAGCCTGACACTT +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHERSQNG*HRSLTL
Trigger: AAGTGTCAGGCTCCTGTGTCAACCATTCTGTGACCG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GAAATAATGGACAAAGCATATGTGTTATCAAGTAGATATGATCTGGTGGACCGTCGGTCACAGAATGGTTaGCACAGGAGCCTGACACTT +
Preference number: 4 (lower is better)
Translates to: EIMDKAYVLSSRYDLVDRRSQNG*HRSLTL
Trigger: AAGTGTCAGGCTCCTGTGTCAACCATTCTGTGACCG...ACGGTCCACCAGATCATATCTACTTGATAACACATATGCTTTGTCCATTATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACGGTCACAGAATGGTTaGCACAGGAGCCTGACACTT +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLRSQNG*HRSLTL
Trigger: AAGTGTCAGGCTCCTGTGTCAACCATTCTGTGACCG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATGTGAGGTGAGGCTTTaGAGAACCCAGGTCTGCACA +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLCEVRL*RTQVCT
Trigger: TGTGCAGACCTGGGTTCTTCAAAGCCTCACCTCACA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAATGTGAGGTGAGGCTTTaGAGAACCCAGGTCTGCACA +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHECEVRL*RTQVCT
Trigger: TGTGCAGACCTGGGTTCTTCAAAGCCTCACCTCACA...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAGCTCTGGATGTGAGGTaGGGCTTTGAAGAACCCAGG +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLALDVR*GFEEPR
Trigger: CCTGGGTTCTTCAAAGCCTCACCTCACATCCAGAGC...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GATATGATCTGGTGGACCGTGAGAATGAGATTCAGTAAATTTAGAAAGCAAGCTTATACCGGCCCATCTTaGTTGCCTCTAGCCATTCAC +
Preference number: 4 (lower is better)
Translates to: DMIWWTVRMRFSKFRKQAYTGPS*LPLAIH
Trigger: GTGAATGGCTAGAGGCAATCAAGATGGGCCGGTATA...AGCTTGCTTTCTAAATTTACTGAATCTCATTCTCACGGTCCACCAGATCATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp ACAATACAGGCTAAAGATGATGAGGCTTCTTTGAGAGCTGCCACACATCCGCAAAATAATAGAGATGGGTaGGCAAGAACTGCTCAATGT +
Preference number: 4 (lower is better)
Translates to: TIQAKDDEASLRAATHPQNNRDG*ARTAQC
Trigger: ACATTGAGCAGTTCTTGCTCACCCATCTCTATTATT...TTGCGGATGTGTGGCAGCTCTCAAAGAAGCCTCATCATCTTTAGCCTGTATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTGAGACAGCTGAAGTTTaGTTCTGGCTCCTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFETAEV*FWLLSP
Trigger: AGGCGAGAGGAGCCAGAAGCAAACTTCAGCTGTCTC...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAGAGACAGCTGAAGTTTaGTTCTGGCTCCTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEETAEV*FWLLSP
Trigger: AGGCGAGAGGAGCCAGAAGCAAACTTCAGCTGTCTC...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAGAGACAGCTGAAGTTTaGTTCTGGCTCCTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIETAEV*FWLLSP
Trigger: AGGCGAGAGGAGCCAGAAGCAAACTTCAGCTGTCTC...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGAGACAGCTGAAGTTTaGTTCTGGCTCCTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLETAEV*FWLLSP
Trigger: AGGCGAGAGGAGCCAGAAGCAAACTTCAGCTGTCTC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATAAATTCACTTCGTTaGTGGGGCTGGCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFINSLR*WGWPGG
Trigger: CCCTCCTGGCCAGCCCCAGCAACGAAGTGAATTTAT...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAATAAATTCACTTCGTTaGTGGGGCTGGCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLINSLR*WGWPGG
Trigger: CCCTCCTGGCCAGCCCCAGCAACGAAGTGAATTTAT...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp TTTGGTCCTTATGTAGGACTAGCCACACCAATTGTGCTTACAGTTTATTTTGTTATAAATTCACTTCGTTaGTGGGGCTGGCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: FGPYVGLATPIVLTVYFVINSLR*WGWPGG
Trigger: CCCTCCTGGCCAGCCCCAGCAACGAAGTGAATTTAT...AACAAAATAAACTGTAAGCACAATTGGTGTGGCTAGTCCTACATAAGGACCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATAATAAATTCACTTCGTTaGTGGGGCTGGCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIINSLR*WGWPGG
Trigger: CCCTCCTGGCCAGCCCCAGCAACGAAGTGAATTTAT...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAATAAATTCACTTCGTTaGTGGGGCTGGCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEINSLR*WGWPGG
Trigger: CCCTCCTGGCCAGCCCCAGCAACGAAGTGAATTTAT...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACCTTCGGCGCTGCAGTaGATTTTGGGAGGTTCATCG +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLPSALQ*ILGGSS
Trigger: CGATGAACCTCCCAAAATGCACTGCAGCGCCGAAGG...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAACTCCCCTTCGGCGCTaGAGTGCATTTTGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLTPLRR*SAFWEV
Trigger: AACCTCCCAAAATGCACTGCAGCGCCGAAGGGGAGT...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATTTTTCAGGCCGCTTTaGCGGGGAAGGTACCTGACA +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLFFRPL*RGRYLT
Trigger: TGTCAGGTACCTTCCCCGGCAAAGCGGCCTGAAAAA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTTTTTTCAGGCCGCTTTaGCGGGGAAGGTACCTGACA +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFFFRPL*RGRYLT
Trigger: TGTCAGGTACCTTCCCCGGCAAAGCGGCCTGAAAAA...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
43% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp CAAATGGGTTCCTTGAGTGTCCAAAGAAATAATGGACAAAGCATATGTGTTATCTTTTTCAGGCCGCTTTaGCGGGGAAGGTACCTGACA +
Preference number: 4 (lower is better)
Translates to: QMGSLSVQRNNGQSICVIFFRPL*RGRYLT
Trigger: TGTCAGGTACCTTCCCCGGCAAAGCGGCCTGAAAAA...GATAACACATATGCTTTGTCCATTATTTCTTTGGACACTCAAGGAACCCATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAATTTTTCAGGCCGCTTTaGCGGGGAAGGTACCTGACA +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEFFRPL*RGRYLT
Trigger: TGTCAGGTACCTTCCCCGGCAAAGCGGCCTGAAAAA...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATATTTTTCAGGCCGCTTTaGCGGGGAAGGTACCTGACA +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIFFRPL*RGRYLT
Trigger: TGTCAGGTACCTTCCCCGGCAAAGCGGCCTGAAAAA...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATATTTACAGACACATACTaGCGGGCTCCTGGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIFTDTY*RAPGLK
Trigger: CTTGAGCCCAGGAGCCCGGCAGTATGTGTCTGTAAA...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTTTTACAGACACATACTaGCGGGCTCCTGGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFFTDTY*RAPGLK
Trigger: CTTGAGCCCAGGAGCCCGGCAGTATGTGTCTGTAAA...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp AATATGTTTGGTCCTTATGTAGGACTAGCCACACCAATTGTGCTTACAGTTTATTTTACAGACACATACTaGCGGGCTCCTGGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: NMFGPYVGLATPIVLTVYFTDTY*RAPGLK
Trigger: CTTGAGCCCAGGAGCCCGGCAGTATGTGTCTGTAAA...ATAAACTGTAAGCACAATTGGTGTGGCTAGTCCTACATAAGGACCAAACATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAATTTACAGACACATACTaGCGGGCTCCTGGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEFTDTY*RAPGLK
Trigger: CTTGAGCCCAGGAGCCCGGCAGTATGTGTCTGTAAA...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATATTTACAGACACATACTaGCGGGCTCCTGGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIFTDTY*RAPGLK
Trigger: CTTGAGCCCAGGAGCCCGGCAGTATGTGTCTGTAAA...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GCTGAGTGGTTGGTTTCAGGTCCTTTTAGTTATCGGTATGAAGGAAGAGAATGCGACTGGAGATGGAGCTaGTTGATTTGTGGTTACATT +
Preference number: 4 (lower is better)
Translates to: AEWLVSGPFSYRYEGRECDWRWS*LICGYI
Trigger: AATGTAACCACAAATCAAGCAGCTCCATCTCCAGTC...GCATTCTCTTCCTTCATACCGATAACTAAAAGGACCTGAAACCAACCACTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp GTTATCGGTATGAAGGAAGAGAATGCTGAGAATGTGACATTAATTGGTGATAAACCTTGTGGTGTAGGCTaGCTCGGGATCATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VIGMKEENAENVTLIGDKPCGVG*LGIIFQ
Trigger: CTGGAAGATGATCCCGAGGCAGCCTACACCACAAGG...TTTATCACCAATTAATGTCACATTCTCAGCATTCTCTTCCTTCATACCGATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp GATATGATCTGGTGGACCGTGAGAATGAGATTCAGTAAATTTAGAAAGCAAGCTTTGCTAGTGCAGATCTaGACTCGGATCAAGGGTGTC +
Preference number: 4 (lower is better)
Translates to: DMIWWTVRMRFSKFRKQALLVQI*TRIKGV
Trigger: GACACCCTTGATCCGAGTCCAGATCTGCACTAGCAA...AGCTTGCTTTCTAAATTTACTGAATCTCATTCTCACGGTCCACCAGATCATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACGCTGCAGTGCATTTTaGGAGGTTCATCGGTCACAG +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLRCSAF*EVHRSQ
Trigger: CTGTGACCGATGAACCTCCCAAAATGCACTGCAGCG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTCGCTGCAGTGCATTTTaGGAGGTTCATCGGTCACAG +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFRCSAF*EVHRSQ
Trigger: CTGTGACCGATGAACCTCCCAAAATGCACTGCAGCG...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATACGCTGCAGTGCATTTTaGGAGGTTCATCGGTCACAG +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIRCSAF*EVHRSQ
Trigger: CTGTGACCGATGAACCTCCCAAAATGCACTGCAGCG...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp AGATACTGGCCACATGTAGCATTAACCATGCAGTTGTTAACAATACAGGCTAAAGGTATAACTGTGAGGTaGACATTTGCCGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: RYWPHVALTMQLLTIQAKGITVR*TFAAAL
Trigger: CAGAGCTGCGGCAAATGTCCACCTCACAGTTATACC...TTTAGCCTGTATTGTTAACAACTGCATGGTTAATGCTACATGTGGCCAGTATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATTTTTCCTCCCCTTGTaGTGTAGGCTGCCTCGGGAT +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLFFLPL*CRLPRD
Trigger: ATCCCGAGGCAGCCTACACCACAAGGGGAGGAAAAA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAATTTTTCCTCCCCTTGTaGTGTAGGCTGCCTCGGGAT +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEFFLPL*CRLPRD
Trigger: ATCCCGAGGCAGCCTACACCACAAGGGGAGGAAAAA...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTTTTTTCCTCCCCTTGTaGTGTAGGCTGCCTCGGGAT +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFFFLPL*CRLPRD
Trigger: ATCCCGAGGCAGCCTACACCACAAGGGGAGGAAAAA...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
43% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAACAATCCATGGGGCTTaGCAGACGATAGCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITITIHGA*QTIAFL
Trigger: GAGGAAGGCTATCGTCTGCCAAGCCCCATGGATTGT...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAACAATCCATGGGGCTTaGCAGACGATAGCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHETIHGA*QTIAFL
Trigger: GAGGAAGGCTATCGTCTGCCAAGCCCCATGGATTGT...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAACAATCCATGGGGCTTaGCAGACGATAGCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLTIHGA*QTIAFL
Trigger: GAGGAAGGCTATCGTCTGCCAAGCCCCATGGATTGT...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATAACAATCCATGGGGCTTaGCAGACGATAGCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLITIHGA*QTIAFL
Trigger: GAGGAAGGCTATCGTCTGCCAAGCCCCATGGATTGT...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATAATGGACAAAGCATATGTGTTATCAAGTAGATATGATCTGGTGGACCGTGAGTCTGGCTTTGATCGCTaGATGCTGCAACTGACACTG +
Preference number: 4 (lower is better)
Translates to: IMDKAYVLSSRYDLVDRESGFDR*MLQLTL
Trigger: CAGTGTCAGTTGCAGCATCCAGCGATCAAAGCCAGA...CTCACGGTCCACCAGATCATATCTACTTGATAACACATATGCTTTGTCCATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATAAAGAATCAGCTCCAGTaGTGGTGTCAGGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIKNQLQ*WCQGRQ
Trigger: CTGTCTTCCCTGACACCATCACTGGAGCTGATTCTT...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAAAGAATCAGCTCCAGTaGTGGTGTCAGGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEKNQLQ*WCQGRQ
Trigger: CTGTCTTCCCTGACACCATCACTGGAGCTGATTCTT...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAAAGAATCAGCTCCAGTaGTGGTGTCAGGGAAGACAG +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIKNQLQ*WCQGRQ
Trigger: CTGTCTTCCCTGACACCATCACTGGAGCTGATTCTT...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTTATACCGGCCCATCTTaGTTGCCTCTAGCCATTCAC +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFYTGPS*LPLAIH
Trigger: GTGAATGGCTAGAGGCAATCAAGATGGGCCGGTATA...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAATATACCGGCCCATCTTaGTTGCCTCTAGCCATTCAC +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEYTGPS*LPLAIH
Trigger: GTGAATGGCTAGAGGCAATCAAGATGGGCCGGTATA...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATATACCGGCCCATCTTaGTTGCCTCTAGCCATTCAC +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLYTGPS*LPLAIH
Trigger: GTGAATGGCTAGAGGCAATCAAGATGGGCCGGTATA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATATATACCGGCCCATCTTaGTTGCCTCTAGCCATTCAC +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIYTGPS*LPLAIH
Trigger: GTGAATGGCTAGAGGCAATCAAGATGGGCCGGTATA...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACCTTCTACATCCTGCTaGAAATGTGCCCTTCGGTGT +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEPSTSC*KCALRC
Trigger: ACACCGAAGGGCACATTTTCAGCAGGATGTAGAAGG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATACCTTCTACATCCTGCTaGAAATGTGCCCTTCGGTGT +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIPSTSC*KCALRC
Trigger: ACACCGAAGGGCACATTTTCAGCAGGATGTAGAAGG...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACTGTGCTTGTGCTTCTaGGAACCCACTTTACATGGC +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLLCLCF*EPTLHG
Trigger: GCCATGTAAAGTGGGTTCTCAGAAGCACAAGCACAG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATACTGTGCTTGTGCTTCTaGGAACCCACTTTACATGGC +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITILCLCF*EPTLHG
Trigger: GCCATGTAAAGTGGGTTCTCAGAAGCACAAGCACAG...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp TATCAAGTAGATATGATCTGGTGGACCGTGAGAATGAGATTCAGTAAATTTAGAATGATGAGGCTTCTTTaGGAGCTGCCACACATCCGC +
Preference number: 4 (lower is better)
Translates to: YQVDMIWWTVRMRFSKFRMMRLL*ELPHIR
Trigger: GCGGATGTGTGGCAGCTCTCAAAGAAGCCTCATCAT...TCTAAATTTACTGAATCTCATTCTCACGGTCCACCAGATCATATCTACTTGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp CCACATGTAGCATTAACCATGCAGTTGTTAACAATACAGGCTAAAGATGATGAGCTTCATATCCTGCCTTaGACATGCATTTCCCGATGG +
Preference number: 4 (lower is better)
Translates to: PHVALTMQLLTIQAKDDELHILP*TCISRW
Trigger: CCATCGGGAAATGCATGTGCAAGGCAGGATATGAAG...CTCATCATCTTTAGCCTGTATTGTTAACAACTGCATGGTTAATGCTACATGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp GTTCCACTGAGATTGTACCAAATAACAAATCAGAGGCGGGATCTGATACATCCTTTTCTCTTCATATCCTaGCTTGCACATGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: VPLRLYQITNQRRDLIHPFLFIS*LAHAFP
Trigger: GGGAAATGCATGTGCAAGGCAGGATATGAAGAGAAA...AGGATGTATCAGATCCCGCCTCTGATTTGTTATTTGGTACAATCTCAGTGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTCTCCTCACACACACCTaGATGGGAGTTGCACTTCTT +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFLLTHT*MGVALL
Trigger: AAGAAGTGCAACTCCCATGCAGGTGTGTGTGAGGAG...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACTCCTCACACACACCTaGATGGGAGTTGCACTTCTT +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLLLTHT*MGVALL
Trigger: AAGAAGTGCAACTCCCATGCAGGTGTGTGTGAGGAG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp CAAATGGGTTCCTTGAGTGTCCAAAGAAATAATGGACAAAGCATATGTGTTATCCTCCTCACACACACCTaGATGGGAGTTGCACTTCTT +
Preference number: 4 (lower is better)
Translates to: QMGSLSVQRNNGQSICVILLTHT*MGVALL
Trigger: AAGAAGTGCAACTCCCATGCAGGTGTGTGTGAGGAG...GATAACACATATGCTTTGTCCATTATTTCTTTGGACACTCAAGGAACCCATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACTCCTCACACACACCTaGATGGGAGTTGCACTTCTT +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHELLTHT*MGVALL
Trigger: AAGAAGTGCAACTCCCATGCAGGTGTGTGTGAGGAG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTGACACCATAGCCTGCTaGTGTACGTGCTCGAATTTG +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFDTIAC*CTCSNL
Trigger: CAAATTCGAGCACGTACAGCAGCAGGCTATGGTGTC...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGACACCATAGCCTGCTaGTGTACGTGCTCGAATTTG +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLDTIAC*CTCSNL
Trigger: CAAATTCGAGCACGTACAGCAGCAGGCTATGGTGTC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAGACACCATAGCCTGCTaGTGTACGTGCTCGAATTTG +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEDTIAC*CTCSNL
Trigger: CAAATTCGAGCACGTACAGCAGCAGGCTATGGTGTC...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGAAGACACCATAGCCTaGTGCTGTACGTGCTCGAAT +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLEDTIA*CCTCSN
Trigger: ATTCGAGCACGTACAGCAGCAGGCTATGGTGTCTTC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTGAAGACACCATAGCCTaGTGCTGTACGTGCTCGAAT +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFEDTIA*CCTCSN
Trigger: ATTCGAGCACGTACAGCAGCAGGCTATGGTGTCTTC...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAGAAGACACCATAGCCTaGTGCTGTACGTGCTCGAAT +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEEDTIA*CCTCSN
Trigger: ATTCGAGCACGTACAGCAGCAGGCTATGGTGTCTTC...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GATATGATCTGGTGGACCGTGAGAATGAGATTCAGTAAATTTAGAAAGCAAGCTCTTTCGGAAAGCTATTaGTTCTGGGGCAGTCCATCT +
Preference number: 4 (lower is better)
Translates to: DMIWWTVRMRFSKFRKQALSESY*FWGSPS
Trigger: AGATGGACTGCCCCAGAAGCAATAGCTTTCCGAAAG...AGCTTGCTTTCTAAATTTACTGAATCTCATTCTCACGGTCCACCAGATCATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATATTGCTAGTGCAGATCTaGACTCGGATCAAGGGTGTC +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITILLVQI*TRIKGV
Trigger: GACACCCTTGATCCGAGTCCAGATCTGCACTAGCAA...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAATTGCTAGTGCAGATCTaGACTCGGATCAAGGGTGTC +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHELLVQI*TRIKGV
Trigger: GACACCCTTGATCCGAGTCCAGATCTGCACTAGCAA...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GGCACAATTGGTTCCACTGAGATTGTACCAAATAACAAATCAGAGGCGGGATCTCATTGGAGATCCAACTaGTCAAAAGCCAGTTATTCT +
Preference number: 4 (lower is better)
Translates to: GTIGSTEIVPNNKSEAGSHWRSN*SKASYS
Trigger: AGAATAACTGGCTTTTGACCAGTTGGATCTCCAATG...AGATCCCGCCTCTGATTTGTTATTTGGTACAATCTCAGTGGAACCAATTGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTTCATCGGTCACAGAATaGTTGACACAGGAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFSSVTE*LTQEPD
Trigger: GTCAGGCTCCTGTGTCAACCATTCTGTGACCGATGA...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATCATCGGTCACAGAATaGTTGACACAGGAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLSSVTE*LTQEPD
Trigger: GTCAGGCTCCTGTGTCAACCATTCTGTGACCGATGA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATATCATCGGTCACAGAATaGTTGACACAGGAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITISSVTE*LTQEPD
Trigger: GTCAGGCTCCTGTGTCAACCATTCTGTGACCGATGA...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGGTATAACTGTGAGGTaGACATTTGCCGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLGITVR*TFAAAL
Trigger: CAGAGCTGCGGCAAATGTCCACCTCACAGTTATACC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTGGTATAACTGTGAGGTaGACATTTGCCGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFGITVR*TFAAAL
Trigger: CAGAGCTGCGGCAAATGTCCACCTCACAGTTATACC...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAGCATGCCATTGTGGGTaGATCAGACTCTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEACHCG*IRLSPE
Trigger: TTCAGGAGAGAGTCTGATCCACCCACAATGGCATGC...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTGCATGCCATTGTGGGTaGATCAGACTCTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFACHCG*IRLSPE
Trigger: TTCAGGAGAGAGTCTGATCCACCCACAATGGCATGC...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATAGCATGCCATTGTGGGTaGATCAGACTCTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIACHCG*IRLSPE
Trigger: TTCAGGAGAGAGTCTGATCCACCCACAATGGCATGC...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGCATGCCATTGTGGGTaGATCAGACTCTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLACHCG*IRLSPE
Trigger: TTCAGGAGAGAGTCTGATCCACCCACAATGGCATGC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTTTGTGCATGCCATTGTaGGTGGATCAGACTCTCTCC +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFLCMPL*VDQTLS
Trigger: GGAGAGAGTCTGATCCACCCACAATGGCATGCACAA...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATATTGTGCATGCCATTGTaGGTGGATCAGACTCTCTCC +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITILCMPL*VDQTLS
Trigger: GGAGAGAGTCTGATCCACCCACAATGGCATGCACAA...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATATTGTGCATGCCATTGTaGGTGGATCAGACTCTCTCC +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLILCMPL*VDQTLS
Trigger: GGAGAGAGTCTGATCCACCCACAATGGCATGCACAA...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACATATTAGGCTTGGATaGGCAACAGCGCACAGGGAA +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEHIRLG*ATAHRE
Trigger: TTCCCTGTGCGCTGTTGCCCATCCAAGCCTAATATG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000432638.6
ENST00000622150.4
CDS-3UTR CCA 90 bp CAAATGGGTTCCTTGAGTGTCCAAAGAAATAATGGACAAAGCATATGTGTTATCCATATTAGGCTTGGATaGGCAACAGCGCACAGGGAA +
Preference number: 4 (lower is better)
Translates to: QMGSLSVQRNNGQSICVIHIRLG*ATAHRE
Trigger: TTCCCTGTGCGCTGTTGCCCATCCAAGCCTAATATG...GATAACACATATGCTTTGTCCATTATTTCTTTGGACACTCAAGGAACCCATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATACATATTAGGCTTGGATaGGCAACAGCGCACAGGGAA +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIHIRLG*ATAHRE
Trigger: TTCCCTGTGCGCTGTTGCCCATCCAAGCCTAATATG...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273854.7
ENST00000622150.4
CDS-3UTR CCA 90 bp GCTGAGTGGTTGGTTTCAGGTCCTTTTAGTTATCGGTATGAAGGAAGAGAATGCCTATTTCATCAAACTTaGGCCTGCTATTTCGCTCTT +
Preference number: 4 (lower is better)
Translates to: AEWLVSGPFSYRYEGRECLFHQT*ACYFAL
Trigger: AAGAGCGAAATAGCAGGCCCAAGTTTGATGAAATAG...GCATTCTCTTCCTTCATACCGATAACTAAAAGGACCTGAAACCAACCACTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATCTGGCTTTGATCGCTaGATGCTGCAACTGACACTG +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLSGFDR*MLQLTL
Trigger: CAGTGTCAGTTGCAGCATCCAGCGATCAAAGCCAGA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTTCTGGCTTTGATCGCTaGATGCTGCAACTGACACTG +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFSGFDR*MLQLTL
Trigger: CAGTGTCAGTTGCAGCATCCAGCGATCAAAGCCAGA...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp TCCACTGAGATTGTACCAAATAACAAATCAGAGGCGGGATCTGATACATCCTTACCCTGTTACCTTCTGTaGGGAGGAACAATGAATTCA +
Preference number: 4 (lower is better)
Translates to: STEIVPNNKSEAGSDTSLPCYLL*GGTMNS
Trigger: TGAATTCATTGTTCCTCCCCACAGAAGGTAACAGGG...TAAGGATGTATCAGATCCCGCCTCTGATTTGTTATTTGGTACAATCTCAGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
3UTR CAA 72 bp TGCAAACAGAAAAGGGCACAATTGGTTCCACTGAGATaGTACCAAATAACAAATCAGAGGCGGGATCTGATA +
Preference number: 4 (lower is better)
Translates to: CKQKRAQLVPLR*YQITNQRRDLI
Trigger: TATCAGATCCCGCCTCTGATTTGTTATTTGGTACAATCTCAGTGGAACCAATTGTGCCCTTTTCTGTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACTCAAATCTTCGACTaGAGACACCATAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFTQIFD*RHHSLL
Trigger: CAGCAGGCTATGGTGTCTTCAGTCGAAGATTTGAGT...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAACTCAAATCTTCGACTaGAGACACCATAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLTQIFD*RHHSLL
Trigger: CAGCAGGCTATGGTGTCTTCAGTCGAAGATTTGAGT...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAACTCAAATCTTCGACTaGAGACACCATAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITITQIFD*RHHSLL
Trigger: CAGCAGGCTATGGTGTCTTCAGTCGAAGATTTGAGT...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATGGACAAAGCATATGTGTTATCAAGTAGATATGATCTGGTGGACCGTGAGAATAGCCACAGCGTCCATTaGACTGTATCCATTTTCCAT +
Preference number: 4 (lower is better)
Translates to: MDKAYVLSSRYDLVDRENSHSVH*TVSIFH
Trigger: ATGGAAAATGGATACAGTTCAATGGACGCTGTGGCT...ATTCTCACGGTCCACCAGATCATATCTACTTGATAACACATATGCTTTGTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATACTTGAAGGCTGTTCATaGTCTTCTTCTGGTGACCGA +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITILEGCS*SSSGDR
Trigger: TCGGTCACCAGAAGAAGATCATGAACAGCCTTCAAG...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACTTGAAGGCTGTTCATaGTCTTCTTCTGGTGACCGA +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLLEGCS*SSSGDR
Trigger: TCGGTCACCAGAAGAAGATCATGAACAGCCTTCAAG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTCTTGAAGGCTGTTCATaGTCTTCTTCTGGTGACCGA +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFLEGCS*SSSGDR
Trigger: TCGGTCACCAGAAGAAGATCATGAACAGCCTTCAAG...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACTTGAAGGCTGTTCATaGTCTTCTTCTGGTGACCGA +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHELEGCS*SSSGDR
Trigger: TCGGTCACCAGAAGAAGATCATGAACAGCCTTCAAG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACCTTCTACATCCTGCTaGAAATGTGCCCTTCGGTGT +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLPSTSC*KCALRC
Trigger: ACACCGAAGGGCACATTTTCAGCAGGATGTAGAAGG...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGTGCTTGTGCTTCTaGGAACCCACTTTACATGGC +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLLCLCF*EPTLHG
Trigger: GCCATGTAAAGTGGGTTCTCAGAAGCACAAGCACAG...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACTGGAGATGGAGCTTaGCAGGTGCCATTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFTGDGA*QVPFFS
Trigger: AGAGAAAAATGGCACCTGTCAAGCTCCATCTCCAGT...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432638.6
CDS-3UTR TCA 90 bp GTTCCACTGAGATTGTACCAAATAACAAATCAGAGGCGGGATCTGATACATCCTGATACATCCTTAGATTaGAAGAATGTAAGGTGCACC +
Preference number: 4 (lower is better)
Translates to: VPLRLYQITNQRRDLIHPDTSLD*KNVRCT
Trigger: GGTGCACCTTACATTCTTTCAATCTAAGGATGTATC...AGGATGTATCAGATCCCGCCTCTGATTTGTTATTTGGTACAATCTCAGTGGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACTTCATATCCTGCCTTaGACATGCATTTCCCGATGG +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLLHILP*TCISRW
Trigger: CCATCGGGAAATGCATGTGCAAGGCAGGATATGAAG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACTTCATATCCTGCCTTaGACATGCATTTCCCGATGG +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHELHILP*TCISRW
Trigger: CCATCGGGAAATGCATGTGCAAGGCAGGATATGAAG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATACTTCATATCCTGCCTTaGACATGCATTTCCCGATGG +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLILHILP*TCISRW
Trigger: CCATCGGGAAATGCATGTGCAAGGCAGGATATGAAG...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTGCCTGCTGCTGTACGTaGTCGAATTTGGAAGACATA +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFACCCT*SNLEDI
Trigger: TATGTCTTCCAAATTCGAGCACGTACAGCAGCAGGC...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAGCCTGCTGCTGTACGTaGTCGAATTTGGAAGACATA +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEACCCT*SNLEDI
Trigger: TATGTCTTCCAAATTCGAGCACGTACAGCAGCAGGC...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGCCTGCTGCTGTACGTaGTCGAATTTGGAAGACATA +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLACCCT*SNLEDI
Trigger: TATGTCTTCCAAATTCGAGCACGTACAGCAGCAGGC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAGACACCATAGCCTGCTaGTGTACGTGCTCGAATTTG +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLDTIAC*CTCSNL
Trigger: CAAATTCGAGCACGTACAGCAGCAGGCTATGGTGTC...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAGAAGACACCATAGCCTaGTGCTGTACGTGCTCGAAT +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLEDTIA*CCTCSN
Trigger: ATTCGAGCACGTACAGCAGCAGGCTATGGTGTCTTC...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTCTTTCGGAAAGCTATTaGTTCTGGGGCAGTCCATCT +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFLSESY*FWGSPS
Trigger: AGATGGACTGCCCCAGAAGCAATAGCTTTCCGAAAG...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACTTTCGGAAAGCTATTaGTTCTGGGGCAGTCCATCT +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHELSESY*FWGSPS
Trigger: AGATGGACTGCCCCAGAAGCAATAGCTTTCCGAAAG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACTTTCGGAAAGCTATTaGTTCTGGGGCAGTCCATCT +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLLSESY*FWGSPS
Trigger: AGATGGACTGCCCCAGAAGCAATAGCTTTCCGAAAG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATCAAACTTGGGCCTaGTATTTCGCTCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLHQTWA*YFALSA
Trigger: GGCAGAAAGAGCGAAATAGCAGGCCCAAGTTTGATG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACATCAAACTTGGGCCTaGTATTTCGCTCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEHQTWA*YFALSA
Trigger: GGCAGAAAGAGCGAAATAGCAGGCCCAAGTTTGATG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATACATCAAACTTGGGCCTaGTATTTCGCTCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIHQTWA*YFALSA
Trigger: GGCAGAAAGAGCGAAATAGCAGGCCCAAGTTTGATG...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTCATCAAACTTGGGCCTaGTATTTCGCTCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFHQTWA*YFALSA
Trigger: GGCAGAAAGAGCGAAATAGCAGGCCCAAGTTTGATG...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGATCTTGTTTTGCTTTaGTGTAGCCACACCGCCTTC +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLDLVLL*CSHTAF
Trigger: GAAGGCGGTGTGGCTACAGCAAAGCAAAACAAGATC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354839.8
ENST00000613740.5
CDS-3UTR GCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAGATCTTGTTTTGCTTTaGTGTAGCCACACCGCCTTC +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIDLVLL*CSHTAF
Trigger: GAAGGCGGTGTGGCTACAGCAAAGCAAAACAAGATC...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613740.5
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGACACTTCGAGCAATTaGGAAGAATCAGCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLDTSSN*EESAPV
Trigger: CACTGGAGCTGATTCTTCCCAATTGCTCGAAGTGTC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAGACACTTCGAGCAATTaGGAAGAATCAGCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEDTSSN*EESAPV
Trigger: CACTGGAGCTGATTCTTCCCAATTGCTCGAAGTGTC...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp CAAATGGGTTCCTTGAGTGTCCAAAGAAATAATGGACAAAGCATATGTGTTATCGACACTTCGAGCAATTaGGAAGAATCAGCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: QMGSLSVQRNNGQSICVIDTSSN*EESAPV
Trigger: CACTGGAGCTGATTCTTCCCAATTGCTCGAAGTGTC...GATAACACATATGCTTTGTCCATTATTTCTTTGGACACTCAAGGAACCCATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp GTTATCGGTATGAAGGAAGAGAATGCTGAGAATGTGACATTAATTGGTGATAAATCATCGGTCACAGAATaGTTGACACAGGAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: VIGMKEENAENVTLIGDKSSVTE*LTQEPD
Trigger: GTCAGGCTCCTGTGTCAACCATTCTGTGACCGATGA...TTTATCACCAATTAATGTCACATTCTCAGCATTCTCTTCCTTCATACCGATAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTATCATCGGTCACAGAATaGTTGACACAGGAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLSSVTE*LTQEPD
Trigger: GTCAGGCTCCTGTGTCAACCATTCTGTGACCGATGA...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATATCACACACACCTGCATaGGAGTTGCACTTCTTGCAT +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLISHTPA*ELHFLH
Trigger: ATGCAAGAAGTGCAACTCCCATGCAGGTGTGTGTGA...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATCACACACACCTGCATaGGAGTTGCACTTCTTGCAT +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLSHTPA*ELHFLH
Trigger: ATGCAAGAAGTGCAACTCCCATGCAGGTGTGTGTGA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp AATATGTTTGGTCCTTATGTAGGACTAGCCACACCAATTGTGCTTACAGTTTATTCACACACACCTGCATaGGAGTTGCACTTCTTGCAT +
Preference number: 4 (lower is better)
Translates to: NMFGPYVGLATPIVLTVYSHTPA*ELHFLH
Trigger: ATGCAAGAAGTGCAACTCCCATGCAGGTGTGTGTGA...ATAAACTGTAAGCACAATTGGTGTGGCTAGTCCTACATAAGGACCAAACATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAGAAAGCTATTGCTTCTaGGGCAGTCCATCTGATTGG +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIESYCF*GSPSDW
Trigger: CCAATCAGATGGACTGCCCCAGAAGCAATAGCTTTC...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGAAAGCTATTGCTTCTaGGGCAGTCCATCTGATTGG +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLESYCF*GSPSDW
Trigger: CCAATCAGATGGACTGCCCCAGAAGCAATAGCTTTC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTGAAAGCTATTGCTTCTaGGGCAGTCCATCTGATTGG +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFESYCF*GSPSDW
Trigger: CCAATCAGATGGACTGCCCCAGAAGCAATAGCTTTC...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAATTGGTGACTGGAGATaGAGCTTGACAGGTGCCATT +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEIGDWR*SLTGAI
Trigger: AATGGCACCTGTCAAGCTCCATCTCCAGTCACCAAT...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432638.6
CDS-3UTR TCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATAGAGGTCCTACATCTCTaGCCTCTGTATTCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIEVLHL*PLYSVS
Trigger: TGAAACTGAATACAGAGGTCAGAGATGTAGGACCTC...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAGAGGTCCTACATCTCTaGCCTCTGTATTCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEEVLHL*PLYSVS
Trigger: TGAAACTGAATACAGAGGTCAGAGATGTAGGACCTC...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp AATATGTTTGGTCCTTATGTAGGACTAGCCACACCAATTGTGCTTACAGTTTATGAGGTCCTACATCTCTaGCCTCTGTATTCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: NMFGPYVGLATPIVLTVYEVLHL*PLYSVS
Trigger: TGAAACTGAATACAGAGGTCAGAGATGTAGGACCTC...ATAAACTGTAAGCACAATTGGTGTGGCTAGTCCTACATAAGGACCAAACATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAGAGGTCCTACATCTCTaGCCTCTGTATTCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIEVLHL*PLYSVS
Trigger: TGAAACTGAATACAGAGGTCAGAGATGTAGGACCTC...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATAACAGACACAAGAGGTTaGAGCTTCCTCATGGGTATA +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLITDTRG*SFLMGI
Trigger: TATACCCATGAGGAAGCTTCAACCTCTTGTGTCTGT...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAACAGACACAAGAGGTTaGAGCTTCCTCATGGGTATA +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLTDTRG*SFLMGI
Trigger: TATACCCATGAGGAAGCTTCAACCTCTTGTGTCTGT...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp TTTGGTCCTTATGTAGGACTAGCCACACCAATTGTGCTTACAGTTTATTTTGTTACAGACACAAGAGGTTaGAGCTTCCTCATGGGTATA +
Preference number: 4 (lower is better)
Translates to: FGPYVGLATPIVLTVYFVTDTRG*SFLMGI
Trigger: TATACCCATGAGGAAGCTTCAACCTCTTGTGTCTGT...AACAAAATAAACTGTAAGCACAATTGGTGTGGCTAGTCCTACATAAGGACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAACAGACACAAGAGGTTaGAGCTTCCTCATGGGTATA +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITITDTRG*SFLMGI
Trigger: TATACCCATGAGGAAGCTTCAACCTCTTGTGTCTGT...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACAGACACAAGAGGTTaGAGCTTCCTCATGGGTATA +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFTDTRG*SFLMGI
Trigger: TATACCCATGAGGAAGCTTCAACCTCTTGTGTCTGT...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp CCACATGTAGCATTAACCATGCAGTTGTTAACAATACAGGCTAAAGATGATGAGAGTTTCATTAACATTTaGGATGGCATTCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: PHVALTMQLLTIQAKDDESFINI*DGIPRS
Trigger: GCTCCTCGGAATGCCATCTCAAATGTTAATGAAACT...CTCATCATCTTTAGCCTGTATTGTTAACAACTGCATGGTTAATGCTACATGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAATTGGAAGACATAAACTaGAGCTGGTTTCAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHELEDIN*SWFQAL
Trigger: GAGGGCTTGAAACCAGCTTCAGTTTATGTCTTCCAA...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATATTGGAAGACATAAACTaGAGCTGGTTTCAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITILEDIN*SWFQAL
Trigger: GAGGGCTTGAAACCAGCTTCAGTTTATGTCTTCCAA...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATTGGAAGACATAAACTaGAGCTGGTTTCAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLLEDIN*SWFQAL
Trigger: GAGGGCTTGAAACCAGCTTCAGTTTATGTCTTCCAA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAAGCCACAGCGTCCATTaGACTGTATCCATTTTCCAT +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITISHSVH*TVSIFH
Trigger: ATGGAAAATGGATACAGTTCAATGGACGCTGTGGCT...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGCCACAGCGTCCATTaGACTGTATCCATTTTCCAT +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFSHSVH*TVSIFH
Trigger: ATGGAAAATGGATACAGTTCAATGGACGCTGTGGCT...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAAGCCACAGCGTCCATTaGACTGTATCCATTTTCCAT +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLSHSVH*TVSIFH
Trigger: ATGGAAAATGGATACAGTTCAATGGACGCTGTGGCT...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACAGGACTCAGAAAGGTaGAATTTCTTACAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEQDSER*NFLQGY
Trigger: GTACCCCTGTAAGAAATTTCACCTTTCTGAGTCCTG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATACAGGACTCAGAAAGGTaGAATTTCTTACAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIQDSER*NFLQGY
Trigger: GTACCCCTGTAAGAAATTTCACCTTTCTGAGTCCTG...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACAGGACTCAGAAAGGTaGAATTTCTTACAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLQDSER*NFLQGY
Trigger: GTACCCCTGTAAGAAATTTCACCTTTCTGAGTCCTG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTTCATATCCTGCCTTaGACATGCATTTCCCGATGG +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLLHILP*TCISRW
Trigger: CCATCGGGAAATGCATGTGCAAGGCAGGATATGAAG...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAGATCTTGTTTTGCTTTaGTGTAGCCACACCGCCATA +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEDLVLL*CSHTAI
Trigger: TATGGCGGTGTGGCTACAGCAAAGCAAAACAAGATC...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000432638.6
ENST00000622150.4
CDS-3UTR GCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTGATCTTGTTTTGCTTTaGTGTAGCCACACCGCCATA +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFDLVLL*CSHTAI
Trigger: TATGGCGGTGTGGCTACAGCAAAGCAAAACAAGATC...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000432638.6
ENST00000622150.4
CDS-3UTR GCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATATTCTGGATCTTGTTTTaGTTTGCTGTAGCCACACCG +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIFWILF*FAVATP
Trigger: CGGTGTGGCTACAGCAAAGCAAAACAAGATCCAGAA...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTTTCTGGATCTTGTTTTaGTTTGCTGTAGCCACACCG +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFFWILF*FAVATP
Trigger: CGGTGTGGCTACAGCAAAGCAAAACAAGATCCAGAA...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATTCTGGATCTTGTTTTaGTTTGCTGTAGCCACACCG +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLFWILF*FAVATP
Trigger: CGGTGTGGCTACAGCAAAGCAAAACAAGATCCAGAA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GTATGCCAATGTTATTTGTTTGAAGCAAAGAAGCAAAGATACTGGCCACATGTATTCTGGATCTTGTTTTaGTTTGCTGTAGCCACACCG +
Preference number: 4 (lower is better)
Translates to: VCQCYLFEAKKQRYWPHVFWILF*FAVATP
Trigger: CGGTGTGGCTACAGCAAAGCAAAACAAGATCCAGAA...TACATGTGGCCAGTATCTTTGCTTCTTTGCTTCAAACAAATAACATTGGCATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAATTCTGGATCTTGTTTTaGTTTGCTGTAGCCACACCG +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEFWILF*FAVATP
Trigger: CGGTGTGGCTACAGCAAAGCAAAACAAGATCCAGAA...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GTTCCACTGAGATTGTACCAAATAACAAATCAGAGGCGGGATCTGATACATCCTTTCACCAAATTCACCTaGTCCAATAACTCTCTCAAT +
Preference number: 4 (lower is better)
Translates to: VPLRLYQITNQRRDLIHPFTKFT*SNNSLN
Trigger: ATTGAGAGAGTTATTGGAGCAGGTGAATTTGGTGAA...AGGATGTATCAGATCCCGCCTCTGATTTGTTATTTGGTACAATCTCAGTGGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGATACCTCTCAGCATaGCAACAAGCTGAATCACAG +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFRYLSA*QQAESQ
Trigger: CTGTGATTCAGCTTGTTGGCATGCTGAGAGGTATCT...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAAGATACCTCTCAGCATaGCAACAAGCTGAATCACAG +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLRYLSA*QQAESQ
Trigger: CTGTGATTCAGCTTGTTGGCATGCTGAGAGGTATCT...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GAAATAATGGACAAAGCATATGTGTTATCAAGTAGATATGATCTGGTGGACCGTAGATACCTCTCAGCATaGCAACAAGCTGAATCACAG +
Preference number: 4 (lower is better)
Translates to: EIMDKAYVLSSRYDLVDRRYLSA*QQAESQ
Trigger: CTGTGATTCAGCTTGTTGGCATGCTGAGAGGTATCT...ACGGTCCACCAGATCATATCTACTTGATAACACATATGCTTTGTCCATTATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAAGATACCTCTCAGCATaGCAACAAGCTGAATCACAG +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHERYLSA*QQAESQ
Trigger: CTGTGATTCAGCTTGTTGGCATGCTGAGAGGTATCT...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTTTCGGAAAGCTATTaGTTCTGGGGCAGTCCATCT +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLLSESY*FWGSPS
Trigger: AGATGGACTGCCCCAGAAGCAATAGCTTTCCGAAAG...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp CCACATGTAGCATTAACCATGCAGTTGTTAACAATACAGGCTAAAGATGATGAGCTATTTCGCTCTTTCTaGCAGCAATCCAGCATTAAC +
Preference number: 4 (lower is better)
Translates to: PHVALTMQLLTIQAKDDELFRSF*QQSSIN
Trigger: GTTAATGCTGGATTGCTGGCAGAAAGAGCGAAATAG...CTCATCATCTTTAGCCTGTATTGTTAACAACTGCATGGTTAATGCTACATGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGATACTCTGCAGGATaGATTAACCAGCGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFRYSAG*INQRLQ
Trigger: CTGAAGACGCTGGTTAATGCATCCTGCAGAGTATCT...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAAGATACTCTGCAGGATaGATTAACCAGCGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLRYSAG*INQRLQ
Trigger: CTGAAGACGCTGGTTAATGCATCCTGCAGAGTATCT...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp AATATGTTTGGTCCTTATGTAGGACTAGCCACACCAATTGTGCTTACAGTTTATAGATACTCTGCAGGATaGATTAACCAGCGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: NMFGPYVGLATPIVLTVYRYSAG*INQRLQ
Trigger: CTGAAGACGCTGGTTAATGCATCCTGCAGAGTATCT...ATAAACTGTAAGCACAATTGGTGTGGCTAGTCCTACATAAGGACCAAACATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAAGATACTCTGCAGGATaGATTAACCAGCGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIRYSAG*INQRLQ
Trigger: CTGAAGACGCTGGTTAATGCATCCTGCAGAGTATCT...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAATCCTGCTGAAAATGTaGCCTTCGGTGTCAACTTTG +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLILLKM*PSVSTL
Trigger: CAAAGTTGACACCGAAGGGCACATTTTCAGCAGGAT...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAATCCTGCTGAAAATGTaGCCTTCGGTGTCAACTTTG +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIILLKM*PSVSTL
Trigger: CAAAGTTGACACCGAAGGGCACATTTTCAGCAGGAT...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAATCCTGCTGAAAATGTaGCCTTCGGTGTCAACTTTG +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEILLKM*PSVSTL
Trigger: CAAAGTTGACACCGAAGGGCACATTTTCAGCAGGAT...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAAAGGGTGATGCTTCGTaGTATGTGCCTGGATTTAAC +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLKGDAS*YVPGFN
Trigger: GTTAAATCCAGGCACATAGCACGAAGCATCACCCTT...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACCTTCAGTGTTGAAATaGACGAAGGTAAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLPSVLK*TKVRKA
Trigger: TGCCTTCCTTACCTTCGTCCATTTCAACACTGAAGG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GAAATAATGGACAAAGCATATGTGTTATCAAGTAGATATGATCTGGTGGACCGTCCTTCAGTGTTGAAATaGACGAAGGTAAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: EIMDKAYVLSSRYDLVDRPSVLK*TKVRKA
Trigger: TGCCTTCCTTACCTTCGTCCATTTCAACACTGAAGG...ACGGTCCACCAGATCATATCTACTTGATAACACATATGCTTTGTCCATTATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATACCTTCAGTGTTGAAATaGACGAAGGTAAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIPSVLK*TKVRKA
Trigger: TGCCTTCCTTACCTTCGTCCATTTCAACACTGAAGG...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATACCTTCAGTGTTGAAATaGACGAAGGTAAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIPSVLK*TKVRKA
Trigger: TGCCTTCCTTACCTTCGTCCATTTCAACACTGAAGG...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp CCACATGTAGCATTAACCATGCAGTTGTTAACAATACAGGCTAAAGATGATGAGATCACTTTGCATACTTaGTATGTGTGGATAGGGGCA +
Preference number: 4 (lower is better)
Translates to: PHVALTMQLLTIQAKDDEITLHT*YVWIGA
Trigger: TGCCCCTATCCACACATACCAAGTATGCAAAGTGAT...CTCATCATCTTTAGCCTGTATTGTTAACAACTGCATGGTTAATGCTACATGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAGACACTTCGAGCAATTaGGAAGAATCAGCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLDTSSN*EESAPV
Trigger: CACTGGAGCTGATTCTTCCCAATTGCTCGAAGTGTC...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATTGGTGACTGGAGATaGAGCTGCTTGATTTGTGGT +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFIGDWR*SCLICG
Trigger: ACCACAAATCAAGCAGCTCCATCTCCAGTCACCAAT...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAATTGGTGACTGGAGATaGAGCTGCTTGATTTGTGGT +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLIGDWR*SCLICG
Trigger: ACCACAAATCAAGCAGCTCCATCTCCAGTCACCAAT...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAATCCATTGGGACGATCTaGTTCTTGCCAAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHESIGTI*FLPRQR
Trigger: TCTTTGTCTTGGCAAGAACCAGATCGTCCCAATGGA...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTTCCATTGGGACGATCTaGTTCTTGCCAAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFSIGTI*FLPRQR
Trigger: TCTTTGTCTTGGCAAGAACCAGATCGTCCCAATGGA...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATATCCATTGGGACGATCTaGTTCTTGCCAAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITISIGTI*FLPRQR
Trigger: TCTTTGTCTTGGCAAGAACCAGATCGTCCCAATGGA...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAGGATGCTGCAAACACTaGGGTGGTTTCAAACTCAAA +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIGCCKH*GGFKLK
Trigger: TTTGAGTTTGAAACCACCCCAGTGTTTGCAGCATCC...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273854.7
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGGATGCTGCAAACACTaGGGTGGTTTCAAACTCAAA +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLGCCKH*GGFKLK
Trigger: TTTGAGTTTGAAACCACCCCAGTGTTTGCAGCATCC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273854.7
ENST00000354839.8
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACGTCTTCAGACTACTTaGGTTACGTATCAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLRLQTT*VTYQLV
Trigger: GACAAGCTGATACGTAACCCAAGTAGTCTGAAGACG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACGTCTTCAGACTACTTaGGTTACGTATCAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHERLQTT*VTYQLV
Trigger: GACAAGCTGATACGTAACCCAAGTAGTCTGAAGACG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATACGTCTTCAGACTACTTaGGTTACGTATCAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIRLQTT*VTYQLV
Trigger: GACAAGCTGATACGTAACCCAAGTAGTCTGAAGACG...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATTTCACATTGGTGACTaGAGATGGAGCTTGACAGGT +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLFHIGD*RWSLTG
Trigger: ACCTGTCAAGCTCCATCTCCAGTCACCAATGTGAAA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432638.6
CDS-3UTR CCA 90 bp ATAATGGACAAAGCATATGTGTTATCAAGTAGATATGATCTGGTGGACCGTGAGCAACTGACACTGGGGTaGTTTCAAACTCAAATCTTC +
Preference number: 4 (lower is better)
Translates to: IMDKAYVLSSRYDLVDREQLTLG*FQTQIF
Trigger: GAAGATTTGAGTTTGAAACCACCCCAGTGTCAGTTG...CTCACGGTCCACCAGATCATATCTACTTGATAACACATATGCTTTGTCCATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp ATAATGGACAAAGCATATGTGTTATCAAGTAGATATGATCTGGTGGACCGTGAGCAAGTAGATATGATCTaGTGGACCGTGAGAATGAGA +
Preference number: 4 (lower is better)
Translates to: IMDKAYVLSSRYDLVDREQVDMI*WTVRMR
Trigger: TCTCATTCTCACGGTCCACCAGATCATATCTACTTG...CTCACGGTCCACCAGATCATATCTACTTGATAACACATATGCTTTGTCCATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
3UTR CAA 72 bp CAAAGATACTGGCCACATGTAGCATTAACCATGCAGTaGTTAACAATACAGGCTAAAGATGATGAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: QRYWPHVALTMQ*LTIQAKDDEAS
Trigger: AGAAGCCTCATCATCTTTAGCCTGTATTGTTAACAACTGCATGGTTAATGCTACATGTGGCCAGTATCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAAGTTTCATTAACATTTaGGATGGCATTCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLSFINI*DGIPRS
Trigger: GCTCCTCGGAATGCCATCTCAAATGTTAATGAAACT...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAAGTTTCATTAACATTTaGGATGGCATTCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITISFINI*DGIPRS
Trigger: GCTCCTCGGAATGCCATCTCAAATGTTAATGAAACT...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGTTTCATTAACATTTaGGATGGCATTCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFSFINI*DGIPRS
Trigger: GCTCCTCGGAATGCCATCTCAAATGTTAATGAAACT...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATAGCATGCAATATAATATaGCACGTCTTTCCTTCCACC +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIACNII*HVFPST
Trigger: GGTGGAAGGAAAGACGTGTCATATTATATTGCATGC...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGCATGCAATATAATATaGCACGTCTTTCCTTCCACC +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLACNII*HVFPST
Trigger: GGTGGAAGGAAAGACGTGTCATATTATATTGCATGC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAGCATGCAATATAATATaGCACGTCTTTCCTTCCACC +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEACNII*HVFPST
Trigger: GGTGGAAGGAAAGACGTGTCATATTATATTGCATGC...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAGCATGCAATATAATATaGCACGTCTTTCCTTCCACC +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIACNII*HVFPST
Trigger: GGTGGAAGGAAAGACGTGTCATATTATATTGCATGC...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTGGAGATGGAGCTGCTTaGTTTGTGGTTACATTTACA +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFGDGAA*FVVTFT
Trigger: TGTAAATGTAACCACAAATCAAGCAGCTCCATCTCC...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp CAAATGGGTTCCTTGAGTGTCCAAAGAAATAATGGACAAAGCATATGTGTTATCGGAGATGGAGCTGCTTaGTTTGTGGTTACATTTACA +
Preference number: 4 (lower is better)
Translates to: QMGSLSVQRNNGQSICVIGDGAA*FVVTFT
Trigger: TGTAAATGTAACCACAAATCAAGCAGCTCCATCTCC...GATAACACATATGCTTTGTCCATTATTTCTTTGGACACTCAAGGAACCCATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGGAGATGGAGCTGCTTaGTTTGTGGTTACATTTACA +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLGDGAA*FVVTFT
Trigger: TGTAAATGTAACCACAAATCAAGCAGCTCCATCTCC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAGGAGATGGAGCTGCTTaGTTTGTGGTTACATTTACA +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIGDGAA*FVVTFT
Trigger: TGTAAATGTAACCACAAATCAAGCAGCTCCATCTCC...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATTTCATACTCTAGGATaGTTCCATTGGGACGATCTG +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLFHTLG*FHWDDL
Trigger: CAGATCGTCCCAATGGAATCATCCTAGAGTATGAAA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTTTTCATACTCTAGGATaGTTCCATTGGGACGATCTG +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFFHTLG*FHWDDL
Trigger: CAGATCGTCCCAATGGAATCATCCTAGAGTATGAAA...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp AATATGTTTGGTCCTTATGTAGGACTAGCCACACCAATTGTGCTTACAGTTTATTTTCATACTCTAGGATaGTTCCATTGGGACGATCTG +
Preference number: 4 (lower is better)
Translates to: NMFGPYVGLATPIVLTVYFHTLG*FHWDDL
Trigger: CAGATCGTCCCAATGGAATCATCCTAGAGTATGAAA...ATAAACTGTAAGCACAATTGGTGTGGCTAGTCCTACATAAGGACCAAACATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTATTGGAAGACATAAACTaGAGCTGGTTTCAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLLEDIN*SWFQAL
Trigger: GAGGGCTTGAAACCAGCTTCAGTTTATGTCTTCCAA...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATACTCAATGGTGATACATaGTGCTTCTATCTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITILNGDT*CFYLLS
Trigger: GCTAAGGAGATAGAAGCATCATGTATCACCATTGAG...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACTCAATGGTGATACATaGTGCTTCTATCTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLLNGDT*CFYLLS
Trigger: GCTAAGGAGATAGAAGCATCATGTATCACCATTGAG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACTCAATGGTGATACATaGTGCTTCTATCTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHELNGDT*CFYLLS
Trigger: GCTAAGGAGATAGAAGCATCATGTATCACCATTGAG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp CCACATGTAGCATTAACCATGCAGTTGTTAACAATACAGGCTAAAGATGATGAGACACAAGGTTACTGTTaGTTAAGATGTTTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: PHVALTMQLLTIQAKDDETQGYC*LRCFWQ
Trigger: CTGCCAGAAACATCTTAATCAACAGTAACCTTGTGT...CTCATCATCTTTAGCCTGTATTGTTAACAACTGCATGGTTAATGCTACATGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAATGCACCTTCATTTCTTaGAGGCTGTTCATGATCTTC +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHECTFIS*RLFMIF
Trigger: GAAGATCATGAACAGCCTTCAAGAAATGAAGGTGCA...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATGCACCTTCATTTCTTaGAGGCTGTTCATGATCTTC +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLCTFIS*RLFMIF
Trigger: GAAGATCATGAACAGCCTTCAAGAAATGAAGGTGCA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATATGCACCTTCATTTCTTaGAGGCTGTTCATGATCTTC +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITICTFIS*RLFMIF
Trigger: GAAGATCATGAACAGCCTTCAAGAAATGAAGGTGCA...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAATGTGAGACAGGAACTTaGGATAGCCTGATGTATATC +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHECETGT*DSLMYI
Trigger: GATATACATCAGGCTATCTCAAGTTCCTGTCTCACA...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATATGTGAGACAGGAACTTaGGATAGCCTGATGTATATC +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLICETGT*DSLMYI
Trigger: GATATACATCAGGCTATCTCAAGTTCCTGTCTCACA...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATATGTGAGACAGGAACTTaGGATAGCCTGATGTATATC +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITICETGT*DSLMYI
Trigger: GATATACATCAGGCTATCTCAAGTTCCTGTCTCACA...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp TTTGGTCCTTATGTAGGACTAGCCACACCAATTGTGCTTACAGTTTATTTTGTTATCAGAGGCGGGATCTaGTACATCCTTAGATTGAAA +
Preference number: 4 (lower is better)
Translates to: FGPYVGLATPIVLTVYFVIRGGI*YILRLK
Trigger: TTTCAATCTAAGGATGTATCAGATCCCGCCTCTGAT...AACAAAATAAACTGTAAGCACAATTGGTGTGGCTAGTCCTACATAAGGACCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTTTTCTCTTCATATCCTaGCTTGCACATGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFFLFIS*LAHAFP
Trigger: GGGAAATGCATGTGCAAGGCAGGATATGAAGAGAAA...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATTTCTCTTCATATCCTaGCTTGCACATGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLFLFIS*LAHAFP
Trigger: GGGAAATGCATGTGCAAGGCAGGATATGAAGAGAAA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATATTTCTCTTCATATCCTaGCTTGCACATGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIFLFIS*LAHAFP
Trigger: GGGAAATGCATGTGCAAGGCAGGATATGAAGAGAAA...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATATTTCTCTTCATATCCTaGCTTGCACATGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIFLFIS*LAHAFP
Trigger: GGGAAATGCATGTGCAAGGCAGGATATGAAGAGAAA...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAGACTGGAGATGGAGCTaGTTGATTTGTGGTTACATT +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEDWRWS*LICGYI
Trigger: AATGTAACCACAAATCAAGCAGCTCCATCTCCAGTC...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTGACTGGAGATGGAGCTaGTTGATTTGTGGTTACATT +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFDWRWS*LICGYI
Trigger: AATGTAACCACAAATCAAGCAGCTCCATCTCCAGTC...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATAGACTGGAGATGGAGCTaGTTGATTTGTGGTTACATT +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIDWRWS*LICGYI
Trigger: AATGTAACCACAAATCAAGCAGCTCCATCTCCAGTC...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTATTCTGGATCTTGTTTTaGTTTGCTGTAGCCACACCG +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLFWILF*FAVATP
Trigger: CGGTGTGGCTACAGCAAAGCAAAACAAGATCCAGAA...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATACACCTAGGAAATCTCTaGGTTGCTTTTCAGTATAGC +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIHLGNL*VAFQYS
Trigger: GCTATACTGAAAAGCAACGCAGAGATTTCCTAGGTG...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACACCTAGGAAATCTCTaGGTTGCTTTTCAGTATAGC +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEHLGNL*VAFQYS
Trigger: GCTATACTGAAAAGCAACGCAGAGATTTCCTAGGTG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp CAAATGGGTTCCTTGAGTGTCCAAAGAAATAATGGACAAAGCATATGTGTTATCCACCTAGGAAATCTCTaGGTTGCTTTTCAGTATAGC +
Preference number: 4 (lower is better)
Translates to: QMGSLSVQRNNGQSICVIHLGNL*VAFQYS
Trigger: GCTATACTGAAAAGCAACGCAGAGATTTCCTAGGTG...GATAACACATATGCTTTGTCCATTATTTCTTTGGACACTCAAGGAACCCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAAGATACCTCTCAGCATaGCAACAAGCTGAATCACAG +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLRYLSA*QQAESQ
Trigger: CTGTGATTCAGCTTGTTGGCATGCTGAGAGGTATCT...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAAGGTACTTCATTCCTaGAGAGATACCTCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFKVLHS*RDTSQH
Trigger: ATGCTGAGAGGTATCTCTGCAGGAATGAAGTACCTT...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATAAAGGTACTTCATTCCTaGAGAGATACCTCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIKVLHS*RDTSQH
Trigger: ATGCTGAGAGGTATCTCTGCAGGAATGAAGTACCTT...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAAAGGTACTTCATTCCTaGAGAGATACCTCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEKVLHS*RDTSQH
Trigger: ATGCTGAGAGGTATCTCTGCAGGAATGAAGTACCTT...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACTATTTCGCTCTTTCTaGCAGCAATCCAGCATTAAC +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHELFRSF*QQSSIN
Trigger: GTTAATGCTGGATTGCTGGCAGAAAGAGCGAAATAG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACTATTTCGCTCTTTCTaGCAGCAATCCAGCATTAAC +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLLFRSF*QQSSIN
Trigger: GTTAATGCTGGATTGCTGGCAGAAAGAGCGAAATAG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTCTATTTCGCTCTTTCTaGCAGCAATCCAGCATTAAC +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFLFRSF*QQSSIN
Trigger: GTTAATGCTGGATTGCTGGCAGAAAGAGCGAAATAG...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAAAGGGTGATGCTTCGTaGTATGTGCCTGGATTTAAC +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLKGDAS*YVPGFN
Trigger: GTTAAATCCAGGCACATAGCACGAAGCATCACCCTT...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAATCACTTTGCATACTTaGTATGTGTGGATAGGGGCA +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIITLHT*YVWIGA
Trigger: TGCCCCTATCCACACATACCAAGTATGCAAAGTGAT...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATCACTTTGCATACTTaGTATGTGTGGATAGGGGCA +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFITLHT*YVWIGA
Trigger: TGCCCCTATCCACACATACCAAGTATGCAAAGTGAT...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAATCACTTTGCATACTTaGTATGTGTGGATAGGGGCA +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEITLHT*YVWIGA
Trigger: TGCCCCTATCCACACATACCAAGTATGCAAAGTGAT...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAATCACTTTGCATACTTaGTATGTGTGGATAGGGGCA +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLITLHT*YVWIGA
Trigger: TGCCCCTATCCACACATACCAAGTATGCAAAGTGAT...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp TATCAAGTAGATATGATCTGGTGGACCGTGAGAATGAGATTCAGTAAATTTAGAATTGGTGACTGGAGATaGAGCTGCTTGATTTGTGGT +
Preference number: 4 (lower is better)
Translates to: YQVDMIWWTVRMRFSKFRIGDWR*SCLICG
Trigger: ACCACAAATCAAGCAGCTCCATCTCCAGTCACCAAT...TCTAAATTTACTGAATCTCATTCTCACGGTCCACCAGATCATATCTACTTGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAATTTCACATTGGTGACTaGAGATGGAGCTGCTTGATT +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEFHIGD*RWSCLI
Trigger: AATCAAGCAGCTCCATCTCCAGTCACCAATGTGAAA...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTTTTCACATTGGTGACTaGAGATGGAGCTGCTTGATT +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFFHIGD*RWSCLI
Trigger: AATCAAGCAGCTCCATCTCCAGTCACCAATGTGAAA...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp CAAATGGGTTCCTTGAGTGTCCAAAGAAATAATGGACAAAGCATATGTGTTATCTTTCACATTGGTGACTaGAGATGGAGCTGCTTGATT +
Preference number: 4 (lower is better)
Translates to: QMGSLSVQRNNGQSICVIFHIGD*RWSCLI
Trigger: AATCAAGCAGCTCCATCTCCAGTCACCAATGTGAAA...GATAACACATATGCTTTGTCCATTATTTCTTTGGACACTCAAGGAACCCATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTATCCATTGGGACGATCTaGTTCTTGCCAAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLSIGTI*FLPRQR
Trigger: TCTTTGTCTTGGCAAGAACCAGATCGTCCCAATGGA...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACTGCAAACACTGGGGTaGTTTCAAACTCAAATCTTC +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLLQTLG*FQTQIF
Trigger: GAAGATTTGAGTTTGAAACCACCCCAGTGTTTGCAG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273854.7
ENST00000354839.8
CDS-3UTR CCA 90 bp TCCACTGAGATTGTACCAAATAACAAATCAGAGGCGGGATCTGATACATCCTTATCACTGGTTTACTTTTaGTCACCACACCTTCTAAAT +
Preference number: 4 (lower is better)
Translates to: STEIVPNNKSEAGSDTSLSLVYF*SPHLLN
Trigger: ATTTAGAAGGTGTGGTGACCAAAAGTAAACCAGTGA...TAAGGATGTATCAGATCCCGCCTCTGATTTGTTATTTGGTACAATCTCAGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTTGTCACGATCATCACTaGTTTACTTTTGGTCACCAC +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFCHDHH*FTFGHH
Trigger: GTGGTGACCAAAAGTAAACCAGTGATGATCGTGACA...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAATGTCACGATCATCACTaGTTTACTTTTGGTCACCAC +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHECHDHH*FTFGHH
Trigger: GTGGTGACCAAAAGTAAACCAGTGATGATCGTGACA...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GAAATAATGGACAAAGCATATGTGTTATCAAGTAGATATGATCTGGTGGACCGTTGTCACGATCATCACTaGTTTACTTTTGGTCACCAC +
Preference number: 4 (lower is better)
Translates to: EIMDKAYVLSSRYDLVDRCHDHH*FTFGHH
Trigger: GTGGTGACCAAAAGTAAACCAGTGATGATCGTGACA...ACGGTCCACCAGATCATATCTACTTGATAACACATATGCTTTGTCCATTATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTCAACTGACACTGGGGTaGTTTCAAACTCAAATCTTC +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFQLTLG*FQTQIF
Trigger: GAAGATTTGAGTTTGAAACCACCCCAGTGTCAGTTG...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACAACTGACACTGGGGTaGTTTCAAACTCAAATCTTC +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLQLTLG*FQTQIF
Trigger: GAAGATTTGAGTTTGAAACCACCCCAGTGTCAGTTG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATACAACTGACACTGGGGTaGTTTCAAACTCAAATCTTC +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIQLTLG*FQTQIF
Trigger: GAAGATTTGAGTTTGAAACCACCCCAGTGTCAGTTG...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp AGATACTGGCCACATGTAGCATTAACCATGCAGTTGTTAACAATACAGGCTAAAAAGAAGCAAAGATACTaGCCACATGTAGCATTAACC +
Preference number: 4 (lower is better)
Translates to: RYWPHVALTMQLLTIQAKKKQRY*PHVALT
Trigger: GGTTAATGCTACATGTGGCCAGTATCTTTGCTTCTT...TTTAGCCTGTATTGTTAACAACTGCATGGTTAATGCTACATGTGGCCAGTATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp AATATGTTTGGTCCTTATGTAGGACTAGCCACACCAATTGTGCTTACAGTTTATAGCAAGCTGAGTGGTTaGTTTCAGGTCCTTTTAGTT +
Preference number: 4 (lower is better)
Translates to: NMFGPYVGLATPIVLTVYSKLSG*FQVLLV
Trigger: AACTAAAAGGACCTGAAACCAACCACTCAGCTTGCT...ATAAACTGTAAGCACAATTGGTGTGGCTAGTCCTACATAAGGACCAAACATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp GATATGATCTGGTGGACCGTGAGAATGAGATTCAGTAAATTTAGAAAGCAAGCTTGTATTGGTTTTCCTTaGTGTTTCTCCCATTCTGAT +
Preference number: 4 (lower is better)
Translates to: DMIWWTVRMRFSKFRKQACIGFP*CFSHSD
Trigger: ATCAGAATGGGAGAAACATCAAGGAAAACCAATACA...AGCTTGCTTTCTAAATTTACTGAATCTCATTCTCACGGTCCACCAGATCATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAGATCAGACTCTCTCCTaGAATAATCCTTTTCACAGA +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIDQTLS*NNPFHR
Trigger: TCTGTGAAAAGGATTATTTCAGGAGAGAGTCTGATC...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGATCAGACTCTCTCCTaGAATAATCCTTTTCACAGA +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLDQTLS*NNPFHR
Trigger: TCTGTGAAAAGGATTATTTCAGGAGAGAGTCTGATC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTGATCAGACTCTCTCCTaGAATAATCCTTTTCACAGA +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFDQTLS*NNPFHR
Trigger: TCTGTGAAAAGGATTATTTCAGGAGAGAGTCTGATC...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAAGTTTCATTAACATTTaGGATGGCATTCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLSFINI*DGIPRS
Trigger: GCTCCTCGGAATGCCATCTCAAATGTTAATGAAACT...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp TATCAAGTAGATATGATCTGGTGGACCGTGAGAATGAGATTCAGTAAATTTAGAGCATGCAATATAATATaGCACGTCTTTCCTTCCACC +
Preference number: 4 (lower is better)
Translates to: YQVDMIWWTVRMRFSKFRACNII*HVFPST
Trigger: GGTGGAAGGAAAGACGTGTCATATTATATTGCATGC...TCTAAATTTACTGAATCTCATTCTCACGGTCCACCAGATCATATCTACTTGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAGGAGATGGAGCTGCTTaGTTTGTGGTTACATTTACA +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLGDGAA*FVVTFT
Trigger: TGTAAATGTAACCACAAATCAAGCAGCTCCATCTCC...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTATTTCATACTCTAGGATaGTTCCATTGGGACGATCTG +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLFHTLG*FHWDDL
Trigger: CAGATCGTCCCAATGGAATCATCCTAGAGTATGAAA...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GCTACTGTTACCTTGATATTCATCGTAGAGAGCCAAAATGTACAAATATGTTTGCTCAATGGTGATACATaGTGCTTCTATCTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: ATVTLIFIVESQNVQICLLNGDT*CFYLLS
Trigger: GCTAAGGAGATAGAAGCATCATGTATCACCATTGAG...CAAACATATTTGTACATTTTGGCTCTCTACGATGAATATCAAGGTAACAGTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTCAATGGTGATACATaGTGCTTCTATCTCCTTAGC +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLLNGDT*CFYLLS
Trigger: GCTAAGGAGATAGAAGCATCATGTATCACCATTGAG...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAACACAAGGTTACTGTTaGTTAAGATGTTTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLTQGYC*LRCFWQ
Trigger: CTGCCAGAAACATCTTAATCAACAGTAACCTTGTGT...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAACACAAGGTTACTGTTaGTTAAGATGTTTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHETQGYC*LRCFWQ
Trigger: CTGCCAGAAACATCTTAATCAACAGTAACCTTGTGT...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGCTTGTCCAACATGTTaGCTATTTCATCAAACTTGG +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLACPTC*LFHQTW
Trigger: CCAAGTTTGATGAAATAGTCAACATGTTGGACAAGC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAGCTTGTCCAACATGTTaGCTATTTCATCAAACTTGG +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEACPTC*LFHQTW
Trigger: CCAAGTTTGATGAAATAGTCAACATGTTGGACAAGC...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAGCTTGTCCAACATGTTaGCTATTTCATCAAACTTGG +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIACPTC*LFHQTW
Trigger: CCAAGTTTGATGAAATAGTCAACATGTTGGACAAGC...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTATGCACCTTCATTTCTTaGAGGCTGTTCATGATCTTC +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLCTFIS*RLFMIF
Trigger: GAAGATCATGAACAGCCTTCAAGAAATGAAGGTGCA...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATAGAAGCGACATTTACATaGAGTTACAATGGCACCATT +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIEATFT*SYNGTI
Trigger: AATGGTGCCATTGTAACTTCATGTAAATGTCGCTTC...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAGAAGCGACATTTACATaGAGTTACAATGGCACCATT +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEEATFT*SYNGTI
Trigger: AATGGTGCCATTGTAACTTCATGTAAATGTCGCTTC...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGAAGCGACATTTACATaGAGTTACAATGGCACCATT +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLEATFT*SYNGTI
Trigger: AATGGTGCCATTGTAACTTCATGTAAATGTCGCTTC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAGAAGCGACATTTACATaGAGTTACAATGGCACCATT +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIEATFT*SYNGTI
Trigger: AATGGTGCCATTGTAACTTCATGTAAATGTCGCTTC...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTGCAGAATCATTCACTTaGAGAAGCGACATTTACATG +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFAESFT*RSDIYM
Trigger: CATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGC...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGCAGAATCATTCACTTaGAGAAGCGACATTTACATG +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLAESFT*RSDIYM
Trigger: CATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAGCAGAATCATTCACTTaGAGAAGCGACATTTACATG +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEAESFT*RSDIYM
Trigger: CATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGC...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAATACAAATTCTGTGGCTaGGGCAAATGTTTTCTAAGG +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEYKFCG*GKCFLR
Trigger: CCTTAGAAAACATTTGCCTCAGCCACAGAATTTGTA...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATACAAATTCTGTGGCTaGGGCAAATGTTTTCTAAGG +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLYKFCG*GKCFLR
Trigger: CCTTAGAAAACATTTGCCTCAGCCACAGAATTTGTA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAATCTCACACTTGCAGATaGGATTGGCATTTTCCAATT +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHESHTCR*DWHFPI
Trigger: AATTGGAAAATGCCAATCTCATCTGCAAGTGTGAGA...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATCTCACACTTGCAGATaGGATTGGCATTTTCCAATT +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLSHTCR*DWHFPI
Trigger: AATTGGAAAATGCCAATCTCATCTGCAAGTGTGAGA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATACAAGTATCAGTCTGTTaGAAATTACTCCCTGTACCA +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIQVSVC*KLLPVP
Trigger: TGGTACAGGGAGTAATTTTCAACAGACTGATACTTG...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACAAGTATCAGTCTGTTaGAAATTACTCCCTGTACCA +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLQVSVC*KLLPVP
Trigger: TGGTACAGGGAGTAATTTTCAACAGACTGATACTTG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAGACTGGAGATGGAGCTaGTTGATTTGTGGTTACATT +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLDWRWS*LICGYI
Trigger: AATGTAACCACAAATCAAGCAGCTCCATCTCCAGTC...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATGGTTTCAAGCCCTCTaGAGTAATAGTTGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLWFQAL*SNSCLF
Trigger: AAAGAGACAACTATTACTGCAGAGGGCTTGAAACCA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTTGGTTTCAAGCCCTCTaGAGTAATAGTTGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFWFQAL*SNSCLF
Trigger: AAAGAGACAACTATTACTGCAGAGGGCTTGAAACCA...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAAAGGTACTTCATTCCTaGAGAGATACCTCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLKVLHS*RDTSQH
Trigger: ATGCTGAGAGGTATCTCTGCAGGAATGAAGTACCTT...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAAAGAGGTACTTTACTaGTTAAGTAAAGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFKEVLY*LSKGWA
Trigger: TGCCCACCCTTTACTTAAGCAGTAAAGTACCTCTTT...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAACTGTGAAAGACTCATaGCCCTTAAGATATTGCTAC +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITITVKDS*PLRYCY
Trigger: GTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGT...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAATCACTTTGCATACTTaGTATGTGTGGATAGGGGCA +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLITLHT*YVWIGA
Trigger: TGCCCCTATCCACACATACCAAGTATGCAAAGTGAT...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTCATTGGAGATCCAACTaGTCAAAAGCCAGTTATTCT +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFHWRSN*SKASYS
Trigger: AGAATAACTGGCTTTTGACCAGTTGGATCTCCAATG...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATTGGAGATCCAACTaGTCAAAAGCCAGTTATTCT +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLHWRSN*SKASYS
Trigger: AGAATAACTGGCTTTTGACCAGTTGGATCTCCAATG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATACATTGGAGATCCAACTaGTCAAAAGCCAGTTATTCT +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIHWRSN*SKASYS
Trigger: AGAATAACTGGCTTTTGACCAGTTGGATCTCCAATG...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp AGATACTGGCCACATGTAGCATTAACCATGCAGTTGTTAACAATACAGGCTAAAGAGCTGCTTGATTTGTaGTTACATTTACAGACACAT +
Preference number: 4 (lower is better)
Translates to: RYWPHVALTMQLLTIQAKELLDL*LHLQTH
Trigger: ATGTGTCTGTAAATGTAACCACAAATCAAGCAGCTC...TTTAGCCTGTATTGTTAACAACTGCATGGTTAATGCTACATGTGGCCAGTATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTATTTCACATTGGTGACTaGAGATGGAGCTGCTTGATT +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLFHIGD*RWSCLI
Trigger: AATCAAGCAGCTCCATCTCCAGTCACCAATGTGAAA...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGTAAGTTCTTACTCCTaGCAGTTTAATGTGCCCATT +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLVSSYS*QFNVPI
Trigger: AATGGGCACATTAAACTGCCAGGAGTAAGAACTTAC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTGTAAGTTCTTACTCCTaGCAGTTTAATGTGCCCATT +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFVSSYS*QFNVPI
Trigger: AATGGGCACATTAAACTGCCAGGAGTAAGAACTTAC...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GAAATAATGGACAAAGCATATGTGTTATCAAGTAGATATGATCTGGTGGACCGTGTAAGTTCTTACTCCTaGCAGTTTAATGTGCCCATT +
Preference number: 4 (lower is better)
Translates to: EIMDKAYVLSSRYDLVDRVSSYS*QFNVPI
Trigger: AATGGGCACATTAAACTGCCAGGAGTAAGAACTTAC...ACGGTCCACCAGATCATATCTACTTGATAACACATATGCTTTGTCCATTATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAGTAAGTTCTTACTCCTaGCAGTTTAATGTGCCCATT +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEVSSYS*QFNVPI
Trigger: AATGGGCACATTAAACTGCCAGGAGTAAGAACTTAC...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTATGTCACGATCATCACTaGTTTACTTTTGGTCACCAC +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLCHDHH*FTFGHH
Trigger: GTGGTGACCAAAAGTAAACCAGTGATGATCGTGACA...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATACTATTTCATCAAACTTaGGCCTGCTATTTCGCTCTT +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITILFHQT*ACYFAL
Trigger: AAGAGCGAAATAGCAGGCCCAAGTTTGATGAAATAG...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTCTATTTCATCAAACTTaGGCCTGCTATTTCGCTCTT +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFLFHQT*ACYFAL
Trigger: AAGAGCGAAATAGCAGGCCCAAGTTTGATGAAATAG...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACTATTTCATCAAACTTaGGCCTGCTATTTCGCTCTT +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLLFHQT*ACYFAL
Trigger: AAGAGCGAAATAGCAGGCCCAAGTTTGATGAAATAG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACTATTTCATCAAACTTaGGCCTGCTATTTCGCTCTT +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHELFHQT*ACYFAL
Trigger: AAGAGCGAAATAGCAGGCCCAAGTTTGATGAAATAG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTTACATGAAGTTACAATaGCACCATTCCGTTTACCAG +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFYMKLQ*HHSVYQ
Trigger: CTGGTAAACGGAATGGTGCCATTGTAACTTCATGTA...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATACATGAAGTTACAATaGCACCATTCCGTTTACCAG +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLYMKLQ*HHSVYQ
Trigger: CTGGTAAACGGAATGGTGCCATTGTAACTTCATGTA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp TATCAAGTAGATATGATCTGGTGGACCGTGAGAATGAGATTCAGTAAATTTAGAGTAGATATGATCTGGTaGACCGTGAGAATGAGATTC +
Preference number: 4 (lower is better)
Translates to: YQVDMIWWTVRMRFSKFRVDMIW*TVRMRF
Trigger: GAATCTCATTCTCACGGTCCACCAGATCATATCTAC...TCTAAATTTACTGAATCTCATTCTCACGGTCCACCAGATCATATCTACTTGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATATTTGGTGGGGTTAAATaGAATATTAGTTCTGGTTGC +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIFGGVK*NISSGC
Trigger: GCAACCAGAACTAATATTTCATTTAACCCCACCAAA...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATGTATTGGTTTTCCTTaGTGTTTCTCCCATTCTGAT +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLCIGFP*CFSHSD
Trigger: ATCAGAATGGGAGAAACATCAAGGAAAACCAATACA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTTGTATTGGTTTTCCTTaGTGTTTCTCCCATTCTGAT +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFCIGFP*CFSHSD
Trigger: ATCAGAATGGGAGAAACATCAAGGAAAACCAATACA...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATATGTATTGGTTTTCCTTaGTGTTTCTCCCATTCTGAT +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLICIGFP*CFSHSD
Trigger: ATCAGAATGGGAGAAACATCAAGGAAAACCAATACA...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GTCCTTTTAGTTATCGGTATGAAGGAAGAGAATGCTGAGAATGTGACATTAATTGATCAGACTCTCTCCTaGAATAATCCTTTTCACAGA +
Preference number: 4 (lower is better)
Translates to: VLLVIGMKEENAENVTLIDQTLS*NNPFHR
Trigger: TCTGTGAAAAGGATTATTTCAGGAGAGAGTCTGATC...AATTAATGTCACATTCTCAGCATTCTCTTCCTTCATACCGATAACTAAAAGGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAACACAAGGTTACTGTTaGTTAAGATGTTTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLTQGYC*LRCFWQ
Trigger: CTGCCAGAAACATCTTAATCAACAGTAACCTTGTGT...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GTCCTTTTAGTTATCGGTATGAAGGAAGAGAATGCTGAGAATGTGACATTAATTGCTTGTCCAACATGTTaGCTATTTCATCAAACTTGG +
Preference number: 4 (lower is better)
Translates to: VLLVIGMKEENAENVTLIACPTC*LFHQTW
Trigger: CCAAGTTTGATGAAATAGTCAACATGTTGGACAAGC...AATTAATGTCACATTCTCAGCATTCTCTTCCTTCATACCGATAACTAAAAGGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR TCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAGCTTGTCCAACATGTTaGCTATTTCATCAAACTTGG +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLACPTC*LFHQTW
Trigger: CCAAGTTTGATGAAATAGTCAACATGTTGGACAAGC...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTATACAAATTCTGTGGCTaGGGCAAATGTTTTCTAAGG +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLYKFCG*GKCFLR
Trigger: CCTTAGAAAACATTTGCCTCAGCCACAGAATTTGTA...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATGTTGTAACTTAAGATaGTGTCTAACTTCATGTCCC +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLCCNLR*CLTSCP
Trigger: GGGACATGAAGTTAGACATCATCTTAAGTTACAACA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGGTCAAAGTAGTAATTaGGTGACTTCAAGTATCAGT +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLGQSSN*VTSSIS
Trigger: ACTGATACTTGAAGTCACTCAATTACTACTTTGACC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATAGGTCAAAGTAGTAATTaGGTGACTTCAAGTATCAGT +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIGQSSN*VTSSIS
Trigger: ACTGATACTTGAAGTCACTCAATTACTACTTTGACC...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATACAGTTCCCAGCCTaGATAAACATGACATTTTAC +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFIQFPA*INMTFY
Trigger: GTAAAATGTCATGTTTATTCAGGCTGGGAACTGTAT...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAATACAGTTCCCAGCCTaGATAAACATGACATTTTAC +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEIQFPA*INMTFY
Trigger: GTAAAATGTCATGTTTATTCAGGCTGGGAACTGTAT...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAAGATATGTTGACCACTaGAACTTCTACTGTGAATAC +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHERYVDH*NFYCEY
Trigger: GTATTCACAGTAGAAGTTTCAGTGGTCAACATATCT...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAAGATATGTTGACCACTaGAACTTCTACTGTGAATAC +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLRYVDH*NFYCEY
Trigger: GTATTCACAGTAGAAGTTTCAGTGGTCAACATATCT...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp GCTACTGTTACCTTGATATTCATCGTAGAGAGCCAAAATGTACAAATATGTTTGCATTTAGAAATTAAATaGGATCCTGCCAGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: ATVTLIFIVESQNVQICLHLEIK*DPAREA
Trigger: AGCTTCCCTGGCAGGATCTCATTTAATTTCTAAATG...CAAACATATTTGTACATTTTGGCTCTCTACGATGAATATCAAGGTAACAGTAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp TATCAAGTAGATATGATCTGGTGGACCGTGAGAATGAGATTCAGTAAATTTAGATGGTTTCAAGCCCTCTaGAGTAATAGTTGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: YQVDMIWWTVRMRFSKFRWFQAL*SNSCLF
Trigger: AAAGAGACAACTATTACTGCAGAGGGCTTGAAACCA...TCTAAATTTACTGAATCTCATTCTCACGGTCCACCAGATCATATCTACTTGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATATTCACCAAATTCACCTaGTCCAATAACTCTCTCAAT +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIFTKFT*SNNSLN
Trigger: ATTGAGAGAGTTATTGGAGCAGGTGAATTTGGTGAA...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAATTCACCAAATTCACCTaGTCCAATAACTCTCTCAAT +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEFTKFT*SNNSLN
Trigger: ATTGAGAGAGTTATTGGAGCAGGTGAATTTGGTGAA...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATTCACCAAATTCACCTaGTCCAATAACTCTCTCAAT +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLFTKFT*SNNSLN
Trigger: ATTGAGAGAGTTATTGGAGCAGGTGAATTTGGTGAA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGTGCTGTTTACAAAGTaGAGAATCATTCACTTGAAG +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLVLFTK*RIIHLK
Trigger: CTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTGTGCTGTTTACAAAGTaGAGAATCATTCACTTGAAG +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFVLFTK*RIIHLK
Trigger: CTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTCTTCGGTGTCAACTTTaGTTGACAAGATACTTTTCA +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFLRCQL*LTRYFS
Trigger: TGAAAAGTATCTTGTCAAGCAAAGTTGACACCGAAG...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAACATTAACAGAAGCCTaGACAGTTAAATCCTTCTAC +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLTLTEA*TVKSFY
Trigger: GTAGAAGGATTTAACTGTGCAGGCTTCTGTTAATGT...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATTAACAGAAGCCTaGACAGTTAAATCCTTCTAC +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFTLTEA*TVKSFY
Trigger: GTAGAAGGATTTAACTGTGCAGGCTTCTGTTAATGT...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATGCTTCGTGCTATGTaGCTGGATTTAACAACATTA +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFMLRAM*LDLTTL
Trigger: TAATGTTGTTAAATCCAGGCACATAGCACGAAGCAT...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAATGCTTCGTGCTATGTaGCTGGATTTAACAACATTA +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEMLRAM*LDLTTL
Trigger: TAATGTTGTTAAATCCAGGCACATAGCACGAAGCAT...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAAGATTTGTTAAACTTTaGCTTGGATTATGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHERFVKL*LGLWPH
Trigger: GTGAGGCCATAATCCAAGGCAAAGTTTAACAAATCT...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGATTTGTTAAACTTTaGCTTGGATTATGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFRFVKL*LGLWPH
Trigger: GTGAGGCCATAATCCAAGGCAAAGTTTAACAAATCT...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GTTATCGGTATGAAGGAAGAGAATGCTGAGAATGTGACATTAATTGGTGATAAATGGGTGAGCAAGAACTaGTCAATGTTCATATCATGT +
Preference number: 4 (lower is better)
Translates to: VIGMKEENAENVTLIGDKWVSKN*SMFISC
Trigger: ACATGATATGAACATTGAGCAGTTCTTGCTCACCCA...TTTATCACCAATTAATGTCACATTCTCAGCATTCTCTTCCTTCATACCGATAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATAGAGCTGCTTGATTTGTaGTTACATTTACAGACACAT +
Preference number: 4 (lower is better)
Translates to: ISYRGTRLMARRTALSLIELLDL*LHLQTH
Trigger: ATGTGTCTGTAAATGTAACCACAAATCAAGCAGCTC...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGAGCTGCTTGATTTGTaGTTACATTTACAGACACAT +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLELLDL*LHLQTH
Trigger: ATGTGTCTGTAAATGTAACCACAAATCAAGCAGCTC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAGAGCTGCTTGATTTGTaGTTACATTTACAGACACAT +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEELLDL*LHLQTH
Trigger: ATGTGTCTGTAAATGTAACCACAAATCAAGCAGCTC...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAGAGCTGCTTGATTTGTaGTTACATTTACAGACACAT +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIELLDL*LHLQTH
Trigger: ATGTGTCTGTAAATGTAACCACAAATCAAGCAGCTC...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAGTAAGTTCTTACTCCTaGCAGTTTAATGTGCCCATT +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLVSSYS*QFNVPI
Trigger: AATGGGCACATTAAACTGCCAGGAGTAAGAACTTAC...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTTCACTGGTTTACTTTTaGTCACCACACCTTCTAAAT +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFSLVYF*SPHLLN
Trigger: ATTTAGAAGGTGTGGTGACCAAAAGTAAACCAGTGA...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATCACTGGTTTACTTTTaGTCACCACACCTTCTAAAT +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLSLVYF*SPHLLN
Trigger: ATTTAGAAGGTGTGGTGACCAAAAGTAAACCAGTGA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAATCACTGGTTTACTTTTaGTCACCACACCTTCTAAAT +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHESLVYF*SPHLLN
Trigger: ATTTAGAAGGTGTGGTGACCAAAAGTAAACCAGTGA...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTATACATGAAGTTACAATaGCACCATTCCGTTTACCAG +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLYMKLQ*HHSVYQ
Trigger: CTGGTAAACGGAATGGTGCCATTGTAACTTCATGTA...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAGAGTCAAAATGGGAATaGTTACAACGGATTAACACT +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIESKWE*LQRINT
Trigger: AGTGTTAATCCGTTGTAACCATTCCCATTTTGACTC...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAGAGTCAAAATGGGAATaGTTACAACGGATTAACACT +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEESKWE*LQRINT
Trigger: AGTGTTAATCCGTTGTAACCATTCCCATTTTGACTC...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGAGTCAAAATGGGAATaGTTACAACGGATTAACACT +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLESKWE*LQRINT
Trigger: AGTGTTAATCCGTTGTAACCATTCCCATTTTGACTC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAGTTTGTGTGGACCCATaGTATATAGCCCTTATTATT +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEVCVDP*YIALII
Trigger: AATAATAAGGGCTATATACCATGGGTCCACACAAAC...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGTTTGTGTGGACCCATaGTATATAGCCCTTATTATT +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLVCVDP*YIALII
Trigger: AATAATAAGGGCTATATACCATGGGTCCACACAAAC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTCTTTGCCTTGGATTATaGCCTCACTACATTTTACTA +
Preference number: 4 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFLCLGL*PHYILL
Trigger: TAGTAAAATGTAGTGAGGCCATAATCCAAGGCAAAG...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACTTTGCCTTGGATTATaGCCTCACTACATTTTACTA +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHELCLGL*PHYILL
Trigger: TAGTAAAATGTAGTGAGGCCATAATCCAAGGCAAAG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAATTGAAGTTAAACATCTaGCAGGACATTAGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHELKLNI*QDISKD
Trigger: GTCTTTGCTAATGTCCTGCCAGATGTTTAACTTCAA...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTATGTATTGGTTTTCCTTaGTGTTTCTCCCATTCTGAT +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLCIGFP*CFSHSD
Trigger: ATCAGAATGGGAGAAACATCAAGGAAAACCAATACA...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR TCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAATACAGTTCCCAGCCTaGATAAACATGACATTTTAC +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLIQFPA*INMTFY
Trigger: GTAAAATGTCATGTTTATTCAGGCTGGGAACTGTAT...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAGTGCTGTTTACAAAGTaGAGAATCATTCACTTGAAG +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLVLFTK*RIIHLK
Trigger: CTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTTCGGTGTCAACTTTaGTTGACAAGATACTTTTCA +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLLRCQL*LTRYFS
Trigger: TGAAAAGTATCTTGTCAAGCAAAGTTGACACCGAAG...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGTGTTTGCCATCCAATaGACTTTTATAGCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLVFAIQ*TFIAKN
Trigger: ATTTTTGGCTATAAAAGTGCATTGGATGGCAAACAC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAGTGTTTGCCATCCAATaGACTTTTATAGCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: QYCERLMPLKILLLAITIVFAIQ*TFIAKN
Trigger: ATTTTTGGCTATAAAAGTGCATTGGATGGCAAACAC...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGACTCAAATAGTGTTTaGCATCCAATGCACTTTTAT +
Preference number: 4 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLDSNSV*HPMHFY
Trigger: ATAAAAGTGCATTGGATGGCAAACACTATTTGAGTC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp GTTATCGGTATGAAGGAAGAGAATGCTGAGAATGTGACATTAATTGGTGATAAAAAAACACCAGTATTTTaGCAAGGAGCTGTTATTCCA +
Preference number: 4 (lower is better)
Translates to: VIGMKEENAENVTLIGDKKTPVF*QGAVIP
Trigger: TGGAATAACAGCTCCTTGGCAAAATACTGGTGTTTT...TTTATCACCAATTAATGTCACATTCTCAGCATTCTCTTCCTTCATACCGATAAC
36% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTATTGAAGTTAAACATCTaGCAGGACATTAGCAAAGAC +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLLKLNI*QDISKD
Trigger: GTCTTTGCTAATGTCCTGCCAGATGTTTAACTTCAA...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CCA 90 bp GAAATAATGGACAAAGCATATGTGTTATCAAGTAGATATGATCTGGTGGACCGTATGTACAAATATGTTTaGTCCTTATGTAGGACTAGC +
Preference number: 4 (lower is better)
Translates to: EIMDKAYVLSSRYDLVDRMYKYV*SLCRTS
Trigger: GCTAGTCCTACATAAGGACCAAACATATTTGTACAT...ACGGTCCACCAGATCATATCTACTTGATAACACATATGCTTTGTCCATTATTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
3UTR CAA 72 bp CAGTATACCAGTTTAAATATAGCACAAATGGGTTCCTaGAGTGTCCAAAGAAATAATGGACAAAGCATATGT +
Preference number: 4 (lower is better)
Translates to: QYTSLNIAQMGS*SVQRNNGQSIC
Trigger: ACATATGCTTTGTCCATTATTTCTTTGGACACTCAAGGAACCCATTTGTGCTATATTTAAACTGGTATACTG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR GCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAGTGTTTGCCATCCAATaGACTTTTATAGCCAAAAAT +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLVFAIQ*TFIAKN
Trigger: ATTTTTGGCTATAAAAGTGCATTGGATGGCAAACAC...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR GCA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAGACTCAAATAGTGTTTaGCATCCAATGCACTTTTAT +
Preference number: 4 (lower is better)
Translates to: QFFKVQYCERLMPLKILLDSNSV*HPMHFY
Trigger: ATAAAAGTGCATTGGATGGCAAACACTATTTGAGTC...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS GCA 90 bp AAGAGGGGAGGGACTGACGGCTGCCGGCCGGTAGGAGCGCGGAGCTaGGCTGCGGCGGCCCAGGAGCTGCTGCGGTTCCCGCTGCTCGGG +
Preference number: 5 (lower is better)
Translates to: KRGGTDGCRPVGARS*AAAAQELLRFPLLG
Trigger: CCCGAGCAGCGGGAACCGCAGCAGCTCCTGGGCCGCCGCAGCGCAGCTCCGCGCTCCTACCGGCCGGCAGCCGTCAGTCCCTCCCCTCTT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS GCA 90 bp CGCGGAGCTGCGCTGCGGCGGCCCAGGAGCTGCTGCGGTTCCCGCTaGTCGGGGAGCAGGCGGTGTGTGCGCGGCTGCGAAGTCGAGGTT +
Preference number: 5 (lower is better)
Translates to: RGAALRRPRSCCGSR*SGSRRCVRGCEVEV
Trigger: AACCTCGACTTCGCAGCCGCGCACACACCGCCTGCTCCCCGAGCAGCGGGAACCGCAGCAGCTCCTGGGCCGCCGCAGCGCAGCTCCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS TCA 90 bp GCAGAAGGAAATAGCTGCGGGCTGAGTGCTGAAGAGGGGAGGGACTaGCGGCTGCCGGCCGGTAGGAGCGCGGAGCTGCGCTGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: AEGNSCGLSAEEGRD*RLPAGRSAELRCGG
Trigger: GCCGCCGCAGCGCAGCTCCGCGCTCCTACCGGCCGGCAGCCGTCAGTCCCTCCCCTCTTCAGCACTCAGCCCGCAGCTATTTCCTTCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS TCA 90 bp ACAGAGGTGTTTTTCAGGCCGCTTTGCCGGGGAAGGTACCTGACATaGCCGCCACACTCCTCACACACACCTGCATGGGAGTTGCACTTC +
Preference number: 5 (lower is better)
Translates to: TEVFFRPLCRGRYLT*PPHSSHTPAWELHF
Trigger: GAAGTGCAACTCCCATGCAGGTGTGTGTGAGGAGTGTGGCGGTCATGTCAGGTACCTTCCCCGGCAAAGCGGCCTGAAAAACACCTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS GCA 90 bp CCTCCAAATGTAGGAACCACGGATCCGGCTGAGACAGCTGAAGTTTaGTTCTGGCTCCTCTCGCCTCCCCCTTTGGTGGGGTTAAATGAA +
Preference number: 5 (lower is better)
Translates to: PPNVGTTDPAETAEV*FWLLSPPPLVGLNE
Trigger: TTCATTTAACCCCACCAAAGGGGGAGGCGAGAGGAGCCAGAAGCAAACTTCAGCTGTCTCAGCCGGATCCGTGGTTCCTACATTTGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000432638.6
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS GCA 90 bp GCTGTAGCCACACCGCCTTCCACTGAGGAGGACGCCGATAACCACTaGCAACAAAATGACTCCCACTGTCACAGACACAGCAATTACAGG +
Preference number: 5 (lower is better)
Translates to: AVATPPSTEEDADNH*QQNDSHCHRHSNYR
Trigger: CCTGTAATTGCTGTGTCTGTGACAGTGGGAGTCATTTTGTTGGCAGTGGTTATCGGCGTCCTCCTCAGTGGAAGGCGGTGTGGCTACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354839.8
ENST00000613740.5
CDS TCA 90 bp CGGCGCTGCAGTGCATTTTGGGAGGTTCATCGGTCACAGAATGGTTaGCACAGGAGCCTGACACTTCGAGCAATTGGGAAGAATCAGCTC +
Preference number: 5 (lower is better)
Translates to: RRCSAFWEVHRSQNG*HRSLTLRAIGKNQL
Trigger: GAGCTGATTCTTCCCAATTGCTCGAAGTGTCAGGCTCCTGTGTCAACCATTCTGTGACCGATGAACCTCCCAAAATGCACTGCAGCGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS TCA 90 bp GGTATAACTGTGAGGTGGACATTTGCCGCAGCTCTGGATGTGAGGTaGGGCTTTGAAGAACCCAGGTCTGCACACTTGACAGGTGCCATT +
Preference number: 5 (lower is better)
Translates to: GITVRWTFAAALDVR*GFEEPRSAHLTGAI
Trigger: AATGGCACCTGTCAAGTGTGCAGACCTGGGTTCTTCAAAGCCTCACCTCACATCCAGAGCTGCGGCAAATGTCCACCTCACAGTTATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS GCA 90 bp GCCACATTCGCAGCAACTTCCACTGAGGAGGACGCCGATAACCACTaGCAACAAAATGACTCCCACTGTCACAGACACAGCAATTACAGG +
Preference number: 5 (lower is better)
Translates to: ATFAATSTEEDADNH*QQNDSHCHRHSNYR
Trigger: CCTGTAATTGCTGTGTCTGTGACAGTGGGAGTCATTTTGTTGGCAGTGGTTATCGGCGTCCTCCTCAGTGGAAGTTGCTGCGAATGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000432638.6
ENST00000511294.1
ENST00000622150.4
CDS TCA 90 bp TGTGAGGTGGACATTTGCCGCAGCTCTGGATGTGAGGTGAGGCTTTaGAGAACCCAGGTCTGCACACTTGACAGGTGCCATTTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: CEVDICRSSGCEVRL*RTQVCTLDRCHFSL
Trigger: AAGAGAAAAATGGCACCTGTCAAGTGTGCAGACCTGGGTTCTTCAAAGCCTCACCTCACATCCAGAGCTGCGGCAAATGTCCACCTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS GCA 90 bp GACCGCCACACTCCTCACACACACCTGCATGGGAGTTGCACTTCTTaGATGCAATATAATATGACACGTCTTTCCTTCCACCAGTGTCAG +
Preference number: 5 (lower is better)
Translates to: DRHTPHTHLHGSCTS*MQYNMTRLSFHQCQ
Trigger: CTGACACTGGTGGAAGGAAAGACGTGTCATATTATATTGCATGCAAGAAGTGCAACTCCCATGCAGGTGTGTGTGAGGAGTGTGGCGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS CCA 90 bp AATGTAGGAACCACGGATCCGGCTGAGACAGCTGAAGTTTGCTTCTaGCTCCTCTCGCCTCCCCCTTTGGTGGGGTTAAATGAAATATTA +
Preference number: 5 (lower is better)
Translates to: NVGTTDPAETAEVCF*LLSPPPLVGLNEIL
Trigger: TAATATTTCATTTAACCCCACCAAAGGGGGAGGCGAGAGGAGCCAGAAGCAAACTTCAGCTGTCTCAGCCGGATCCGTGGTTCCTACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000432638.6
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GTTCCACTGAGATTGTACCAAATAACAAATCAGAGGCGGGATCTGATACATCCTGCTGCGAAGTCGAGGTaGAAACTGCACCGCCAAGGC +
Preference number: 5 (lower is better)
Translates to: VPLRLYQITNQRRDLIHPAAKSR*KLHRQG
Trigger: GCCTTGGCGGTGCAGTTTCAACCTCGACTTCGCAGC...AGGATGTATCAGATCCCGCCTCTGATTTGTTATTTGGTACAATCTCAGTGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS TCA 90 bp CCATTCCGTTTACCAGCTGCACCTTCATTTCTTGAAGGCTGTTCATaGTCTTCTTCTGGTGACCGACAAGAGTCACTCCAAGCCGTCTCA +
Preference number: 5 (lower is better)
Translates to: PFRLPAAPSFLEGCS*SSSGDRQESLQAVS
Trigger: TGAGACGGCTTGGAGTGACTCTTGTCGGTCACCAGAAGAAGATCATGAACAGCCTTCAAGAAATGAAGGTGCAGCTGGTAAACGGAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS TCA 90 bp ATGACTCCCACTGTCACAGACACAGCAATTACAGGAATCTGGCTTTaGTCGCTGGATGCTGCAACTGACACTGGGGTGGTTTCAAACTCA +
Preference number: 5 (lower is better)
Translates to: MTPTVTDTAITGIWL*SLDAATDTGVVSNS
Trigger: TGAGTTTGAAACCACCCCAGTGTCAGTTGCAGCATCCAGCGATCAAAGCCAGATTCCTGTAATTGCTGTGTCTGTGACAGTGGGAGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432638.6
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ACAATACAGGCTAAAGATGATGAGGCTTCTTTGAGAGCTGCCACACATCCGCAAAATAAATTCACTTCGTaGCTGGGGCTGGCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: TIQAKDDEASLRAATHPQNKFTS*LGLARR
Trigger: CCTCCTGGCCAGCCCCAGCAACGAAGTGAATTTATT...TTGCGGATGTGTGGCAGCTCTCAAAGAAGCCTCATCATCTTTAGCCTGTATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp TCTTTGAGAGCTGCCACACATCCGCAAAGGTTAACTGATTTCCCTTACCTCATCTCGGTCACAGAATGGTaGACACAGGAGCCTGACACT +
Preference number: 5 (lower is better)
Translates to: SLRAATHPQRLTDFPYLISVTEW*TQEPDT
Trigger: AGTGTCAGGCTCCTGTGTCAACCATTCTGTGACCGA...GATGAGGTAAGGGAAATCAGTTAACCTTTGCGGATGTGTGGCAGCTCTCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp ACAATACAGGCTAAAGATGATGAGGCTTCTTTGAGAGCTGCCACACATCCGCAAGATGATGAGGCTTCTTaGAGAGCTGCCACACATCCG +
Preference number: 5 (lower is better)
Translates to: TIQAKDDEASLRAATHPQDDEAS*RAATHP
Trigger: CGGATGTGTGGCAGCTCTCAAAGAAGCCTCATCATC...TTGCGGATGTGTGGCAGCTCTCAAAGAAGCCTCATCATCTTTAGCCTGTATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS TCA 90 bp ACACACACCTGCATGGGAGTTGCACTTCTTGCATGCAATATAATATaGCACGTCTTTCCTTCCACCAGTGTCAGCAGGCGGAATCCATTC +
Preference number: 5 (lower is better)
Translates to: THTCMGVALLACNII*HVFPSTSVSRRNPF
Trigger: GAATGGATTCCGCCTGCTGACACTGGTGGAAGGAAAGACGTGTCATATTATATTGCATGCAAGAAGTGCAACTCCCATGCAGGTGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ACAATACAGGCTAAAGATGATGAGGCTTCTTTGAGAGCTGCCACACATCCGCAACTCTCGCCTCCCCCTTaGGTGGGGTTAAATGAAATA +
Preference number: 5 (lower is better)
Translates to: TIQAKDDEASLRAATHPQLSPPP*VGLNEI
Trigger: TATTTCATTTAACCCCACCAAAGGGGGAGGCGAGAG...TTGCGGATGTGTGGCAGCTCTCAAAGAAGCCTCATCATCTTTAGCCTGTATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp TCTTTGAGAGCTGCCACACATCCGCAAAGGTTAACTGATTTCCCTTACCTCATCACACCTGCATGGGAGTaGCACTTCTTGCATGCAATA +
Preference number: 5 (lower is better)
Translates to: SLRAATHPQRLTDFPYLITPAWE*HFLHAI
Trigger: TATTGCATGCAAGAAGTGCAACTCCCATGCAGGTGT...GATGAGGTAAGGGAAATCAGTTAACCTTTGCGGATGTGTGGCAGCTCTCAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp ATGGACAAAGCATATGTGTTATCAAGTAGATATGATCTGGTGGACCGTGAGAATGTTTTTCAGGCCGCTTaGCCGGGGAAGGTACCTGAC +
Preference number: 5 (lower is better)
Translates to: MDKAYVLSSRYDLVDRENVFQAA*PGKVPD
Trigger: GTCAGGTACCTTCCCCGGCAAAGCGGCCTGAAAAAC...ATTCTCACGGTCCACCAGATCATATCTACTTGATAACACATATGCTTTGTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATAGCTGCGAAGTCGAGGTaGAAACTGCACCGCCAAGGC +
Preference number: 5 (lower is better)
Translates to: ISYRGTRLMARRTALSLIAAKSR*KLHRQG
Trigger: GCCTTGGCGGTGCAGTTTCAACCTCGACTTCGCAGC...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGCTGCGAAGTCGAGGTaGAAACTGCACCGCCAAGGC +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLAAKSR*KLHRQG
Trigger: GCCTTGGCGGTGCAGTTTCAACCTCGACTTCGCAGC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ACAATACAGGCTAAAGATGATGAGGCTTCTTTGAGAGCTGCCACACATCCGCAACCTGCCAGGGAAGCTTaGTTTAAGCTACTGTTACCT +
Preference number: 5 (lower is better)
Translates to: TIQAKDDEASLRAATHPQPAREA*FKLLLP
Trigger: AGGTAACAGTAGCTTAAACAAAGCTTCCCTGGCAGG...TTGCGGATGTGTGGCAGCTCTCAAAGAAGCCTCATCATCTTTAGCCTGTATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTGTTTTTCAGGCCGCTTaGCCGGGGAAGGTACCTGAC +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFVFQAA*PGKVPD
Trigger: GTCAGGTACCTTCCCCGGCAAAGCGGCCTGAAAAAC...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAGTTTTTCAGGCCGCTTaGCCGGGGAAGGTACCTGAC +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEVFQAA*PGKVPD
Trigger: GTCAGGTACCTTCCCCGGCAAAGCGGCCTGAAAAAC...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATAGTTTTTCAGGCCGCTTaGCCGGGGAAGGTACCTGAC +
Preference number: 5 (lower is better)
Translates to: ISYRGTRLMARRTALSLIVFQAA*PGKVPD
Trigger: GTCAGGTACCTTCCCCGGCAAAGCGGCCTGAAAAAC...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGTTTTTCAGGCCGCTTaGCCGGGGAAGGTACCTGAC +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLVFQAA*PGKVPD
Trigger: GTCAGGTACCTTCCCCGGCAAAGCGGCCTGAAAAAC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS TCA 90 bp ACCATAGCCTGCTGCTGTACGTGCTCGAATTTGGAAGACATAAACTaGAGCTGGTTTCAAGCCCTCTGCAGTAATAGTTGTCTCTTTAGA +
Preference number: 5 (lower is better)
Translates to: TIACCCTCSNLEDIN*SWFQALCSNSCLFR
Trigger: TCTAAAGAGACAACTATTACTGCAGAGGGCTTGAAACCAGCTTCAGTTTATGTCTTCCAAATTCGAGCACGTACAGCAGCAGGCTATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp TCTTTGAGAGCTGCCACACATCCGCAAAGGTTAACTGATTTCCCTTACCTCATCTTCTGTTCCATCACTTaGCATACTTGGTATGTGTGG +
Preference number: 5 (lower is better)
Translates to: SLRAATHPQRLTDFPYLIFCSIT*HTWYVW
Trigger: CCACACATACCAAGTATGCAAAGTGATGGAACAGAA...GATGAGGTAAGGGAAATCAGTTAACCTTTGCGGATGTGTGGCAGCTCTCAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGCGCTGCAGTGCATTTaGGGAGGTTCATCGGTCACA +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLALQCI*GGSSVT
Trigger: TGTGACCGATGAACCTCCCAAAATGCACTGCAGCGC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAGCGCTGCAGTGCATTTaGGGAGGTTCATCGGTCACA +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEALQCI*GGSSVT
Trigger: TGTGACCGATGAACCTCCCAAAATGCACTGCAGCGC...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTGCGCTGCAGTGCATTTaGGGAGGTTCATCGGTCACA +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFALQCI*GGSSVT
Trigger: TGTGACCGATGAACCTCCCAAAATGCACTGCAGCGC...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACCGCCATATTAGGCTaGGATGGGCAACAGCGCACA +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFTAILG*DGQQRT
Trigger: TGTGCGCTGTTGCCCATCCAAGCCTAATATGGCGGT...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000432638.6
ENST00000622150.4
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAACCGCCATATTAGGCTaGGATGGGCAACAGCGCACA +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLTAILG*DGQQRT
Trigger: TGTGCGCTGTTGCCCATCCAAGCCTAATATGGCGGT...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000432638.6
ENST00000622150.4
CDS-3UTR CAA 90 bp GAAATAATGGACAAAGCATATGTGTTATCAAGTAGATATGATCTGGTGGACCGTACCGCCATATTAGGCTaGGATGGGCAACAGCGCACA +
Preference number: 5 (lower is better)
Translates to: EIMDKAYVLSSRYDLVDRTAILG*DGQQRT
Trigger: TGTGCGCTGTTGCCCATCCAAGCCTAATATGGCGGT...ACGGTCCACCAGATCATATCTACTTGATAACACATATGCTTTGTCCATTATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp GTTCCACTGAGATTGTACCAAATAACAAATCAGAGGCGGGATCTGATACATCCTCTTCTGGATCTTGTTTaGCTTTGCTGTAGCCACACC +
Preference number: 5 (lower is better)
Translates to: VPLRLYQITNQRRDLIHPLLDLV*LCCSHT
Trigger: GGTGTGGCTACAGCAAAGCAAAACAAGATCCAGAAG...AGGATGTATCAGATCCCGCCTCTGATTTGTTATTTGGTACAATCTCAGTGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp GGCACAATTGGTTCCACTGAGATTGTACCAAATAACAAATCAGAGGCGGGATCTTTCCTCTTCTGGATCTaGTTTTGCTTTGCTGTAGCC +
Preference number: 5 (lower is better)
Translates to: GTIGSTEIVPNNKSEAGSFLFWI*FCFAVA
Trigger: GGCTACAGCAAAGCAAAACAAGATCCAGAAGAGGAA...AGATCCCGCCTCTGATTTGTTATTTGGTACAATCTCAGTGGAACCAATTGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGAATTTTTCCTCCCCTaGTGGTGTAGGCTGCCTCGG +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLEFFLP*WCRLPR
Trigger: CCGAGGCAGCCTACACCACAAGGGGAGGAAAAATTC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTGAATTTTTCCTCCCCTaGTGGTGTAGGCTGCCTCGG +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFEFFLP*WCRLPR
Trigger: CCGAGGCAGCCTACACCACAAGGGGAGGAAAAATTC...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAGAATTTTTCCTCCCCTaGTGGTGTAGGCTGCCTCGG +
Preference number: 5 (lower is better)
Translates to: QYCERLMPLKILLLAITIEFFLP*WCRLPR
Trigger: CCGAGGCAGCCTACACCACAAGGGGAGGAAAAATTC...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTGACAATCCATGGGGCTaGGCAGACGATAGCCTTCCT +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFDNPWG*ADDSLP
Trigger: AGGAAGGCTATCGTCTGCCAAGCCCCATGGATTGTC...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGACAATCCATGGGGCTaGGCAGACGATAGCCTTCCT +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLDNPWG*ADDSLP
Trigger: AGGAAGGCTATCGTCTGCCAAGCCCCATGGATTGTC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GAAATAATGGACAAAGCATATGTGTTATCAAGTAGATATGATCTGGTGGACCGTGACAATCCATGGGGCTaGGCAGACGATAGCCTTCCT +
Preference number: 5 (lower is better)
Translates to: EIMDKAYVLSSRYDLVDRDNPWG*ADDSLP
Trigger: AGGAAGGCTATCGTCTGCCAAGCCCCATGGATTGTC...ACGGTCCACCAGATCATATCTACTTGATAACACATATGCTTTGTCCATTATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAGACAATCCATGGGGCTaGGCAGACGATAGCCTTCCT +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEDNPWG*ADDSLP
Trigger: AGGAAGGCTATCGTCTGCCAAGCCCCATGGATTGTC...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GGCACAATTGGTTCCACTGAGATTGTACCAAATAACAAATCAGAGGCGGGATCTCTGGGTCCTGTTCCTTaGCCTTTCAAAAAGACTTTT +
Preference number: 5 (lower is better)
Translates to: GTIGSTEIVPNNKSEAGSLGPVP*PFKKTF
Trigger: AAAAGTCTTTTTGAAAGGCAAAGGAACAGGACCCAG...AGATCCCGCCTCTGATTTGTTATTTGGTACAATCTCAGTGGAACCAATTGTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAAATAAATTCACTTCGTaGCTGGGGCTGGCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHENKFTS*LGLARR
Trigger: CCTCCTGGCCAGCCCCAGCAACGAAGTGAATTTATT...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAATAAATTCACTTCGTaGCTGGGGCTGGCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFNKFTS*LGLARR
Trigger: CCTCCTGGCCAGCCCCAGCAACGAAGTGAATTTATT...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAAATAAATTCACTTCGTaGCTGGGGCTGGCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: QYCERLMPLKILLLAITINKFTS*LGLARR
Trigger: CCTCCTGGCCAGCCCCAGCAACGAAGTGAATTTATT...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTTCGGTCACAGAATGGTaGACACAGGAGCCTGACACT +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFSVTEW*TQEPDT
Trigger: AGTGTCAGGCTCCTGTGTCAACCATTCTGTGACCGA...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATCGGTCACAGAATGGTaGACACAGGAGCCTGACACT +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLSVTEW*TQEPDT
Trigger: AGTGTCAGGCTCCTGTGTCAACCATTCTGTGACCGA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAATCGGTCACAGAATGGTaGACACAGGAGCCTGACACT +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHESVTEW*TQEPDT
Trigger: AGTGTCAGGCTCCTGTGTCAACCATTCTGTGACCGA...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATATCGGTCACAGAATGGTaGACACAGGAGCCTGACACT +
Preference number: 5 (lower is better)
Translates to: QYCERLMPLKILLLAITISVTEW*TQEPDT
Trigger: AGTGTCAGGCTCCTGTGTCAACCATTCTGTGACCGA...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp TATCAAGTAGATATGATCTGGTGGACCGTGAGAATGAGATTCAGTAAATTTAGAGCGCTGCAGTGCATTTaGGGAGGTTCATCGGTCACA +
Preference number: 5 (lower is better)
Translates to: YQVDMIWWTVRMRFSKFRALQCI*GGSSVT
Trigger: TGTGACCGATGAACCTCCCAAAATGCACTGCAGCGC...TCTAAATTTACTGAATCTCATTCTCACGGTCCACCAGATCATATCTACTTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAGCGCTGCAGTGCATTTaGGGAGGTTCATCGGTCACA +
Preference number: 5 (lower is better)
Translates to: QFFKVQYCERLMPLKILLALQCI*GGSSVT
Trigger: TGTGACCGATGAACCTCCCAAAATGCACTGCAGCGC...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACCCAGGTCTGCACACTaGACAGGTGCCATTTTTCTC +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEPRSAH*TGAIFL
Trigger: GAGAAAAATGGCACCTGTCAAGTGTGCAGACCTGGG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATACCCAGGTCTGCACACTaGACAGGTGCCATTTTTCTC +
Preference number: 5 (lower is better)
Translates to: ISYRGTRLMARRTALSLIPRSAH*TGAIFL
Trigger: GAGAAAAATGGCACCTGTCAAGTGTGCAGACCTGGG...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GGCACAATTGGTTCCACTGAGATTGTACCAAATAACAAATCAGAGGCGGGATCTTGGAGATGGAGCTGCTaGATTTGTGGTTACATTTAC +
Preference number: 5 (lower is better)
Translates to: GTIGSTEIVPNNKSEAGSWRWSC*ICGYIY
Trigger: GTAAATGTAACCACAAATCAAGCAGCTCCATCTCCA...AGATCCCGCCTCTGATTTGTTATTTGGTACAATCTCAGTGGAACCAATTGTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAACCGCCATATTAGGCTaGGATGGGCAACAGCGCACA +
Preference number: 5 (lower is better)
Translates to: QFFKVQYCERLMPLKILLTAILG*DGQQRT
Trigger: TGTGCGCTGTTGCCCATCCAAGCCTAATATGGCGGT...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273854.7
ENST00000622150.4
CDS-3UTR CAA 90 bp GTCCTTTTAGTTATCGGTATGAAGGAAGAGAATGCTGAGAATGTGACATTAATTGAATTTTTCCTCCCCTaGTGGTGTAGGCTGCCTCGG +
Preference number: 5 (lower is better)
Translates to: VLLVIGMKEENAENVTLIEFFLP*WCRLPR
Trigger: CCGAGGCAGCCTACACCACAAGGGGAGGAAAAATTC...AATTAATGTCACATTCTCAGCATTCTCTTCCTTCATACCGATAACTAAAAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp TCCACTGAGATTGTACCAAATAACAAATCAGAGGCGGGATCTGATACATCCTTAGCGTCTTCAGACTACTaGGGTTACGTATCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: STEIVPNNKSEAGSDTSLASSDY*GYVSAC
Trigger: ACAAGCTGATACGTAACCCAAGTAGTCTGAAGACGC...TAAGGATGTATCAGATCCCGCCTCTGATTTGTTATTTGGTACAATCTCAGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp CCACATGTAGCATTAACCATGCAGTTGTTAACAATACAGGCTAAAGATGATGAGTTGCAGCCTTCAGTGTaGAAATGGACGAAGGTAAGG +
Preference number: 5 (lower is better)
Translates to: PHVALTMQLLTIQAKDDELQPSV*KWTKVR
Trigger: CCTTACCTTCGTCCATTTCAACACTGAAGGCTGCAA...CTCATCATCTTTAGCCTGTATTGTTAACAACTGCATGGTTAATGCTACATGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATACTCTCGCCTCCCCCTTaGGTGGGGTTAAATGAAATA +
Preference number: 5 (lower is better)
Translates to: QYCERLMPLKILLLAITILSPPP*VGLNEI
Trigger: TATTTCATTTAACCCCACCAAAGGGGGAGGCGAGAG...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACTCTCGCCTCCCCCTTaGGTGGGGTTAAATGAAATA +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLLSPPP*VGLNEI
Trigger: TATTTCATTTAACCCCACCAAAGGGGGAGGCGAGAG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACCCAGGTCTGCACACTaGACAGGTGCCATTTTTCTC +
Preference number: 5 (lower is better)
Translates to: QFFKVQYCERLMPLKILLPRSAH*TGAIFL
Trigger: GAGAAAAATGGCACCTGTCAAGTGTGCAGACCTGGG...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GTCCTTTTAGTTATCGGTATGAAGGAAGAGAATGCTGAGAATGTGACATTAATTCCCAGGTCTGCACACTaGACAGGTGCCATTTTTCTC +
Preference number: 5 (lower is better)
Translates to: VLLVIGMKEENAENVTLIPRSAH*TGAIFL
Trigger: GAGAAAAATGGCACCTGTCAAGTGTGCAGACCTGGG...AATTAATGTCACATTCTCAGCATTCTCTTCCTTCATACCGATAACTAAAAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp ATAATGGACAAAGCATATGTGTTATCAAGTAGATATGATCTGGTGGACCGTGAGTCTAGGATGATTCCATaGGGACGATCTGGTTCTTGC +
Preference number: 5 (lower is better)
Translates to: IMDKAYVLSSRYDLVDRESRMIP*GRSGSC
Trigger: GCAAGAACCAGATCGTCCCAATGGAATCATCCTAGA...CTCACGGTCCACCAGATCATATCTACTTGATAACACATATGCTTTGTCCATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTGTATACCGGCCCATCTaGATTGCCTCTAGCCATTCA +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFVYRPI*IASSHS
Trigger: TGAATGGCTAGAGGCAATCAAGATGGGCCGGTATAC...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAGTATACCGGCCCATCTaGATTGCCTCTAGCCATTCA +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEVYRPI*IASSHS
Trigger: TGAATGGCTAGAGGCAATCAAGATGGGCCGGTATAC...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAGTATACCGGCCCATCTaGATTGCCTCTAGCCATTCA +
Preference number: 5 (lower is better)
Translates to: QYCERLMPLKILLLAITIVYRPI*IASSHS
Trigger: TGAATGGCTAGAGGCAATCAAGATGGGCCGGTATAC...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp CCACATGTAGCATTAACCATGCAGTTGTTAACAATACAGGCTAAAGATGATGAGGAGCCACAGCGTCCATaGAACTGTATCCATTTTCCA +
Preference number: 5 (lower is better)
Translates to: PHVALTMQLLTIQAKDDEEPQRP*NCIHFP
Trigger: TGGAAAATGGATACAGTTCAATGGACGCTGTGGCTC...CTCATCATCTTTAGCCTGTATTGTTAACAACTGCATGGTTAATGCTACATGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAATTGCAGCCTTCAGTGTaGAAATGGACGAAGGTAAGG +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHELQPSV*KWTKVR
Trigger: CCTTACCTTCGTCCATTTCAACACTGAAGGCTGCAA...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTCTCGCCTCCCCCTTaGGTGGGGTTAAATGAAATA +
Preference number: 5 (lower is better)
Translates to: QFFKVQYCERLMPLKILLLSPPP*VGLNEI
Trigger: TATTTCATTTAACCCCACCAAAGGGGGAGGCGAGAG...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATACATCACTTTGCATACTaGGTATGTGTGGATAGGGGC +
Preference number: 5 (lower is better)
Translates to: QYCERLMPLKILLLAITIHHFAY*VCVDRG
Trigger: GCCCCTATCCACACATACCAAGTATGCAAAGTGATG...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATCACTTTGCATACTaGGTATGTGTGGATAGGGGC +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLHHFAY*VCVDRG
Trigger: GCCCCTATCCACACATACCAAGTATGCAAAGTGATG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTCATCACTTTGCATACTaGGTATGTGTGGATAGGGGC +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFHHFAY*VCVDRG
Trigger: GCCCCTATCCACACATACCAAGTATGCAAAGTGATG...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GTATGCCAATGTTATTTGTTTGAAGCAAAGAAGCAAAGATACTGGCCACATGTACATCACTTTGCATACTaGGTATGTGTGGATAGGGGC +
Preference number: 5 (lower is better)
Translates to: VCQCYLFEAKKQRYWPHVHHFAY*VCVDRG
Trigger: GCCCCTATCCACACATACCAAGTATGCAAAGTGATG...TACATGTGGCCAGTATCTTTGCTTCTTTGCTTCAAACAAATAACATTGGCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAATCTTCATATCCTGCCTaGCACATGCATTTCCCGATG +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHESSYPA*HMHFPM
Trigger: CATCGGGAAATGCATGTGCAAGGCAGGATATGAAGA...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATCTTCATATCCTGCCTaGCACATGCATTTCCCGATG +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLSSYPA*HMHFPM
Trigger: CATCGGGAAATGCATGTGCAAGGCAGGATATGAAGA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp TTTGGTCCTTATGTAGGACTAGCCACACCAATTGTGCTTACAGTTTATTTTGTTTCTTCATATCCTGCCTaGCACATGCATTTCCCGATG +
Preference number: 5 (lower is better)
Translates to: FGPYVGLATPIVLTVYFVSSYPA*HMHFPM
Trigger: CATCGGGAAATGCATGTGCAAGGCAGGATATGAAGA...AACAAAATAAACTGTAAGCACAATTGGTGTGGCTAGTCCTACATAAGGACCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATATCTTCATATCCTGCCTaGCACATGCATTTCCCGATG +
Preference number: 5 (lower is better)
Translates to: QYCERLMPLKILLLAITISSYPA*HMHFPM
Trigger: CATCGGGAAATGCATGTGCAAGGCAGGATATGAAGA...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACACCTGCATGGGAGTaGCACTTCTTGCATGCAATA +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFTPAWE*HFLHAI
Trigger: TATTGCATGCAAGAAGTGCAACTCCCATGCAGGTGT...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAACACCTGCATGGGAGTaGCACTTCTTGCATGCAATA +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLTPAWE*HFLHAI
Trigger: TATTGCATGCAAGAAGTGCAACTCCCATGCAGGTGT...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATAACACCTGCATGGGAGTaGCACTTCTTGCATGCAATA +
Preference number: 5 (lower is better)
Translates to: ISYRGTRLMARRTALSLITPAWE*HFLHAI
Trigger: TATTGCATGCAAGAAGTGCAACTCCCATGCAGGTGT...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp TCCACTGAGATTGTACCAAATAACAAATCAGAGGCGGGATCTGATACATCCTTATCTCAAAGGTATAGTTaGTGTGAGCGAGTAGATCCA +
Preference number: 5 (lower is better)
Translates to: STEIVPNNKSEAGSDTSLSQRYS*CERVDP
Trigger: TGGATCTACTCGCTCACACAAACTATACCTTTGAGA...TAAGGATGTATCAGATCCCGCCTCTGATTTGTTATTTGGTACAATCTCAGTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp GTTCCACTGAGATTGTACCAAATAACAAATCAGAGGCGGGATCTGATACATCCTATGGAGCTGCTTGATTaGTGGTTACATTTACAGACA +
Preference number: 5 (lower is better)
Translates to: VPLRLYQITNQRRDLIHPMELLD*WLHLQT
Trigger: TGTCTGTAAATGTAACCACAAATCAAGCAGCTCCAT...AGGATGTATCAGATCCCGCCTCTGATTTGTTATTTGGTACAATCTCAGTGGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATCTAGGATGATTCCATaGGGACGATCTGGTTCTTGC +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLSRMIP*GRSGSC
Trigger: GCAAGAACCAGATCGTCCCAATGGAATCATCCTAGA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTTCTAGGATGATTCCATaGGGACGATCTGGTTCTTGC +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFSRMIP*GRSGSC
Trigger: GCAAGAACCAGATCGTCCCAATGGAATCATCCTAGA...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACTTCTGGATCTTGTTTaGCTTTGCTGTAGCCACACC +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLLLDLV*LCCSHT
Trigger: GGTGTGGCTACAGCAAAGCAAAACAAGATCCAGAAG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTCTTCTGGATCTTGTTTaGCTTTGCTGTAGCCACACC +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFLLDLV*LCCSHT
Trigger: GGTGTGGCTACAGCAAAGCAAAACAAGATCCAGAAG...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACTTCTGGATCTTGTTTaGCTTTGCTGTAGCCACACC +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHELLDLV*LCCSHT
Trigger: GGTGTGGCTACAGCAAAGCAAAACAAGATCCAGAAG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GTTCCACTGAGATTGTACCAAATAACAAATCAGAGGCGGGATCTGATACATCCTATCACTGGTTTACTTTaGGTCACCACACCTTCTAAA +
Preference number: 5 (lower is better)
Translates to: VPLRLYQITNQRRDLIHPITGLL*VTTPSK
Trigger: TTTAGAAGGTGTGGTGACCAAAAGTAAACCAGTGAT...AGGATGTATCAGATCCCGCCTCTGATTTGTTATTTGGTACAATCTCAGTGGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATAGCGTCTTCAGACTACTaGGGTTACGTATCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: ISYRGTRLMARRTALSLIASSDY*GYVSAC
Trigger: ACAAGCTGATACGTAACCCAAGTAGTCTGAAGACGC...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGCGTCTTCAGACTACTaGGGTTACGTATCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLASSDY*GYVSAC
Trigger: ACAAGCTGATACGTAACCCAAGTAGTCTGAAGACGC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTGCGTCTTCAGACTACTaGGGTTACGTATCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFASSDY*GYVSAC
Trigger: ACAAGCTGATACGTAACCCAAGTAGTCTGAAGACGC...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GCTACTGTTACCTTGATATTCATCGTAGAGAGCCAAAATGTACAAATATGTTTGGTATACCGGCCCATCTaGATTGCCTCTAGCCATTCA +
Preference number: 5 (lower is better)
Translates to: ATVTLIFIVESQNVQICLVYRPI*IASSHS
Trigger: TGAATGGCTAGAGGCAATCAAGATGGGCCGGTATAC...CAAACATATTTGTACATTTTGGCTCTCTACGATGAATATCAAGGTAACAGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTGAGCCACAGCGTCCATaGAACTGTATCCATTTTCCA +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFEPQRP*NCIHFP
Trigger: TGGAAAATGGATACAGTTCAATGGACGCTGTGGCTC...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGAGCCACAGCGTCCATaGAACTGTATCCATTTTCCA +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLEPQRP*NCIHFP
Trigger: TGGAAAATGGATACAGTTCAATGGACGCTGTGGCTC...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAGAGCCACAGCGTCCATaGAACTGTATCCATTTTCCA +
Preference number: 5 (lower is better)
Translates to: QYCERLMPLKILLLAITIEPQRP*NCIHFP
Trigger: TGGAAAATGGATACAGTTCAATGGACGCTGTGGCTC...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATAAGTTGGCTCCTCTCCTaGTTCCATTTCTCACACTTG +
Preference number: 5 (lower is better)
Translates to: ISYRGTRLMARRTALSLISWLLS*FHFSHL
Trigger: CAAGTGTGAGAAATGGAACAAGGAGAGGAGCCAACT...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAAGTTGGCTCCTCTCCTaGTTCCATTTCTCACACTTG +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHESWLLS*FHFSHL
Trigger: CAAGTGTGAGAAATGGAACAAGGAGAGGAGCCAACT...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GATATGATCTGGTGGACCGTGAGAATGAGATTCAGTAAATTTAGAAAGCAAGCTAAGCAAGCTGAGTGGTaGGTTTCAGGTCCTTTTAGT +
Preference number: 5 (lower is better)
Translates to: DMIWWTVRMRFSKFRKQAKQAEW*VSGPFS
Trigger: ACTAAAAGGACCTGAAACCAACCACTCAGCTTGCTT...AGCTTGCTTTCTAAATTTACTGAATCTCATTCTCACGGTCCACCAGATCATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS TCA 90 bp GTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATaGAGTTACAATGGCACCATTCCGTTTACCAGCTGCACCTTCATT +
Preference number: 5 (lower is better)
Translates to: VYKVQNHSLEEATFT*SYNGTIPFTSCTFI
Trigger: AATGAAGGTGCAGCTGGTAAACGGAATGGTGCCATTGTAACTTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTATTGCAGCCTTCAGTGTaGAAATGGACGAAGGTAAGG +
Preference number: 5 (lower is better)
Translates to: QFFKVQYCERLMPLKILLLQPSV*KWTKVR
Trigger: CCTTACCTTCGTCCATTTCAACACTGAAGGCTGCAA...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp CCACATGTAGCATTAACCATGCAGTTGTTAACAATACAGGCTAAAGATGATGAGAAAGGTGAAGGTTCTTaGCAGCCTTCAGTGTTGAAA +
Preference number: 5 (lower is better)
Translates to: PHVALTMQLLTIQAKDDEKGEGS*QPSVLK
Trigger: TTTCAACACTGAAGGCTGCAAAGAACCTTCACCTTT...CTCATCATCTTTAGCCTGTATTGTTAACAACTGCATGGTTAATGCTACATGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATACTTCCCACCCATTTTTaGGAAAAGCAATCCATCCCA +
Preference number: 5 (lower is better)
Translates to: QYCERLMPLKILLLAITILPTHF*EKQSIP
Trigger: TGGGATGGATTGCTTTTCCAAAAAATGGGTGGGAAG...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTCTTCCCACCCATTTTTaGGAAAAGCAATCCATCCCA +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFLPTHF*EKQSIP
Trigger: TGGGATGGATTGCTTTTCCAAAAAATGGGTGGGAAG...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATACTTCCCACCCATTTTTaGGAAAAGCAATCCATCCCA +
Preference number: 5 (lower is better)
Translates to: ISYRGTRLMARRTALSLILPTHF*EKQSIP
Trigger: TGGGATGGATTGCTTTTCCAAAAAATGGGTGGGAAG...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACATCACTTTGCATACTaGGTATGTGTGGATAGGGGC +
Preference number: 5 (lower is better)
Translates to: QFFKVQYCERLMPLKILLHHFAY*VCVDRG
Trigger: GCCCCTATCCACACATACCAAGTATGCAAAGTGATG...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTATCTTCATATCCTGCCTaGCACATGCATTTCCCGATG +
Preference number: 5 (lower is better)
Translates to: QFFKVQYCERLMPLKILLSSYPA*HMHFPM
Trigger: CATCGGGAAATGCATGTGCAAGGCAGGATATGAAGA...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTATCTAGGATGATTCCATaGGGACGATCTGGTTCTTGC +
Preference number: 5 (lower is better)
Translates to: QFFKVQYCERLMPLKILLSRMIP*GRSGSC
Trigger: GCAAGAACCAGATCGTCCCAATGGAATCATCCTAGA...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp AGATACTGGCCACATGTAGCATTAACCATGCAGTTGTTAACAATACAGGCTAAACGTGTAGCTGGTCTCTaGGTCCTTTTCAAAATACTT +
Preference number: 5 (lower is better)
Translates to: RYWPHVALTMQLLTIQAKRVAGL*VLFKIL
Trigger: AAGTATTTTGAAAAGGACCAAGAGACCAGCTACACG...TTTAGCCTGTATTGTTAACAACTGCATGGTTAATGCTACATGTGGCCAGTATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTTTCCTCTTCTGGATCTaGTTTTGCTTTGCTGTAGCC +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFFLFWI*FCFAVA
Trigger: GGCTACAGCAAAGCAAAACAAGATCCAGAAGAGGAA...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATTCCTCTTCTGGATCTaGTTTTGCTTTGCTGTAGCC +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLFLFWI*FCFAVA
Trigger: GGCTACAGCAAAGCAAAACAAGATCCAGAAGAGGAA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAATTCCTCTTCTGGATCTaGTTTTGCTTTGCTGTAGCC +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEFLFWI*FCFAVA
Trigger: GGCTACAGCAAAGCAAAACAAGATCCAGAAGAGGAA...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAGCGTCTTCAGACTACTaGGGTTACGTATCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: QFFKVQYCERLMPLKILLASSDY*GYVSAC
Trigger: ACAAGCTGATACGTAACCCAAGTAGTCTGAAGACGC...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAATGTTTGCAGCACAGTTaGTGTGGACCCATGGTATAT +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHECLQHS*CGPMVY
Trigger: ATATACCATGGGTCCACACAAACTGTGCTGCAAACA...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTTGTTTGCAGCACAGTTaGTGTGGACCCATGGTATAT +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFCLQHS*CGPMVY
Trigger: ATATACCATGGGTCCACACAAACTGTGCTGCAAACA...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATATGTTTGCAGCACAGTTaGTGTGGACCCATGGTATAT +
Preference number: 5 (lower is better)
Translates to: ISYRGTRLMARRTALSLICLQHS*CGPMVY
Trigger: ATATACCATGGGTCCACACAAACTGTGCTGCAAACA...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAGTTATGTCTAAGCAATaGTGGCAAGTTCATCAGCCC +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEVMSKQ*WQVHQP
Trigger: GGGCTGATGAACTTGCCACAATTGCTTAGACATAAC...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATAGTCTGTGCTTTATTTTaGGTAGTCTGGTGGGTGACA +
Preference number: 5 (lower is better)
Translates to: ISYRGTRLMARRTALSLIVCALF*VVWWVT
Trigger: TGTCACCCACCAGACTACCAAAAATAAAGCACAGAC...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTGTCTGTGCTTTATTTTaGGTAGTCTGGTGGGTGACA +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFVCALF*VVWWVT
Trigger: TGTCACCCACCAGACTACCAAAAATAAAGCACAGAC...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAGTCTGTGCTTTATTTTaGGTAGTCTGGTGGGTGACA +
Preference number: 5 (lower is better)
Translates to: QYCERLMPLKILLLAITIVCALF*VVWWVT
Trigger: TGTCACCCACCAGACTACCAAAAATAAAGCACAGAC...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAAAAGGTGAAGGTTCTTaGCAGCCTTCAGTGTTGAAA +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLKGEGS*QPSVLK
Trigger: TTTCAACACTGAAGGCTGCAAAGAACCTTCACCTTT...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACTGGGTCCTGTTCCTTaGCCTTTCAAAAAGACTTTT +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLLGPVP*PFKKTF
Trigger: AAAAGTCTTTTTGAAAGGCAAAGGAACAGGACCCAG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTCTGGGTCCTGTTCCTTaGCCTTTCAAAAAGACTTTT +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFLGPVP*PFKKTF
Trigger: AAAAGTCTTTTTGAAAGGCAAAGGAACAGGACCCAG...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACTGGGTCCTGTTCCTTaGCCTTTCAAAAAGACTTTT +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHELGPVP*PFKKTF
Trigger: AAAAGTCTTTTTGAAAGGCAAAGGAACAGGACCCAG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GCTACTGTTACCTTGATATTCATCGTAGAGAGCCAAAATGTACAAATATGTTTGCTTCCCACCCATTTTTaGGAAAAGCAATCCATCCCA +
Preference number: 5 (lower is better)
Translates to: ATVTLIFIVESQNVQICLLPTHF*EKQSIP
Trigger: TGGGATGGATTGCTTTTCCAAAAAATGGGTGGGAAG...CAAACATATTTGTACATTTTGGCTCTCTACGATGAATATCAAGGTAACAGTAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATATTCTGTTCCATCACTTaGCATACTTGGTATGTGTGG +
Preference number: 5 (lower is better)
Translates to: QYCERLMPLKILLLAITIFCSIT*HTWYVW
Trigger: CCACACATACCAAGTATGCAAAGTGATGGAACAGAA...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAATTCTGTTCCATCACTTaGCATACTTGGTATGTGTGG +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEFCSIT*HTWYVW
Trigger: CCACACATACCAAGTATGCAAAGTGATGGAACAGAA...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATTCTGTTCCATCACTTaGCATACTTGGTATGTGTGG +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLFCSIT*HTWYVW
Trigger: CCACACATACCAAGTATGCAAAGTGATGGAACAGAA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTTTCTGTTCCATCACTTaGCATACTTGGTATGTGTGG +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFFCSIT*HTWYVW
Trigger: CCACACATACCAAGTATGCAAAGTGATGGAACAGAA...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTTCCCGCAGGGTAAATTaGAGTTCTATGAAGATTCTG +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFSRRVN*SSMKIL
Trigger: CAGAATCTTCATAGAACTCAAATTTACCCTGCGGGA...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATCCCGCAGGGTAAATTaGAGTTCTATGAAGATTCTG +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLSRRVN*SSMKIL
Trigger: CAGAATCTTCATAGAACTCAAATTTACCCTGCGGGA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp AATATGTTTGGTCCTTATGTAGGACTAGCCACACCAATTGTGCTTACAGTTTATTCCCGCAGGGTAAATTaGAGTTCTATGAAGATTCTG +
Preference number: 5 (lower is better)
Translates to: NMFGPYVGLATPIVLTVYSRRVN*SSMKIL
Trigger: CAGAATCTTCATAGAACTCAAATTTACCCTGCGGGA...ATAAACTGTAAGCACAATTGGTGTGGCTAGTCCTACATAAGGACCAAACATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAATCTCAAAGGTATAGTTaGTGTGAGCGAGTAGATCCA +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHESQRYS*CERVDP
Trigger: TGGATCTACTCGCTCACACAAACTATACCTTTGAGA...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTTCTCAAAGGTATAGTTaGTGTGAGCGAGTAGATCCA +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFSQRYS*CERVDP
Trigger: TGGATCTACTCGCTCACACAAACTATACCTTTGAGA...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATGGAGATGGAGCTGCTaGATTTGTGGTTACATTTAC +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLWRWSC*ICGYIY
Trigger: GTAAATGTAACCACAAATCAAGCAGCTCCATCTCCA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATATGGAGATGGAGCTGCTaGATTTGTGGTTACATTTAC +
Preference number: 5 (lower is better)
Translates to: QYCERLMPLKILLLAITIWRWSC*ICGYIY
Trigger: GTAAATGTAACCACAAATCAAGCAGCTCCATCTCCA...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATACGTGTAGCTGGTCTCTaGGTCCTTTTCAAAATACTT +
Preference number: 5 (lower is better)
Translates to: ISYRGTRLMARRTALSLIRVAGL*VLFKIL
Trigger: AAGTATTTTGAAAAGGACCAAGAGACCAGCTACACG...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTCGTGTAGCTGGTCTCTaGGTCCTTTTCAAAATACTT +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFRVAGL*VLFKIL
Trigger: AAGTATTTTGAAAAGGACCAAGAGACCAGCTACACG...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACGTGTAGCTGGTCTCTaGGTCCTTTTCAAAATACTT +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHERVAGL*VLFKIL
Trigger: AAGTATTTTGAAAAGGACCAAGAGACCAGCTACACG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAACTATTTCATCAAACTaGGGCCTGCTATTTCGCTCT +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHETISSN*GLLFRS
Trigger: AGAGCGAAATAGCAGGCCCAAGTTTGATGAAATAGT...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAACTATTTCATCAAACTaGGGCCTGCTATTTCGCTCT +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLTISSN*GLLFRS
Trigger: AGAGCGAAATAGCAGGCCCAAGTTTGATGAAATAGT...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp AATATGTTTGGTCCTTATGTAGGACTAGCCACACCAATTGTGCTTACAGTTTATACTATTTCATCAAACTaGGGCCTGCTATTTCGCTCT +
Preference number: 5 (lower is better)
Translates to: NMFGPYVGLATPIVLTVYTISSN*GLLFRS
Trigger: AGAGCGAAATAGCAGGCCCAAGTTTGATGAAATAGT...ATAAACTGTAAGCACAATTGGTGTGGCTAGTCCTACATAAGGACCAAACATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATAACTATTTCATCAAACTaGGGCCTGCTATTTCGCTCT +
Preference number: 5 (lower is better)
Translates to: ISYRGTRLMARRTALSLITISSN*GLLFRS
Trigger: AGAGCGAAATAGCAGGCCCAAGTTTGATGAAATAGT...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp TCCACTGAGATTGTACCAAATAACAAATCAGAGGCGGGATCTGATACATCCTTAAGCTTGTCCAACATGTaGACTATTTCATCAAACTTG +
Preference number: 5 (lower is better)
Translates to: STEIVPNNKSEAGSDTSLSLSNM*TISSNL
Trigger: CAAGTTTGATGAAATAGTCAACATGTTGGACAAGCT...TAAGGATGTATCAGATCCCGCCTCTGATTTGTTATTTGGTACAATCTCAGTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATACTGCACCTTCATTTCTaGAAGGCTGTTCATGATCTT +
Preference number: 5 (lower is better)
Translates to: ISYRGTRLMARRTALSLILHLHF*KAVHDL
Trigger: AAGATCATGAACAGCCTTCAAGAAATGAAGGTGCAG...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACTGCACCTTCATTTCTaGAAGGCTGTTCATGATCTT +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHELHLHF*KAVHDL
Trigger: AAGATCATGAACAGCCTTCAAGAAATGAAGGTGCAG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAAGATCCCTGGAAGTTTaGAAAGGGGTTGCCTTAATT +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHERSLEV*KGVALI
Trigger: AATTAAGGCAACCCCTTTCAAAACTTCCAGGGATCT...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATACGGTGTCAACTTTGCTaGACAAGATACTTTTCAGGA +
Preference number: 5 (lower is better)
Translates to: QYCERLMPLKILLLAITIRCQLC*TRYFSG
Trigger: TCCTGAAAAGTATCTTGTCAAGCAAAGTTGACACCG...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACGGTGTCAACTTTGCTaGACAAGATACTTTTCAGGA +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHERCQLC*TRYFSG
Trigger: TCCTGAAAAGTATCTTGTCAAGCAAAGTTGACACCG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACCTTCGGTGTCAACTTaGCTTGACAAGATACTTTTC +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEPSVST*LDKILF
Trigger: GAAAAGTATCTTGTCAAGCAAAGTTGACACCGAAGG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATACCTTCGGTGTCAACTTaGCTTGACAAGATACTTTTC +
Preference number: 5 (lower is better)
Translates to: ISYRGTRLMARRTALSLIPSVST*LDKILF
Trigger: GAAAAGTATCTTGTCAAGCAAAGTTGACACCGAAGG...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACCTTCGGTGTCAACTTaGCTTGACAAGATACTTTTC +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLPSVST*LDKILF
Trigger: GAAAAGTATCTTGTCAAGCAAAGTTGACACCGAAGG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATACATTTTACTAGAGTaGGCTCCTCTCCTTGTTCCA +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLYILLE*APLLVP
Trigger: TGGAACAAGGAGAGGAGCCAACTCTAGTAAAATGTA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATATACATTTTACTAGAGTaGGCTCCTCTCCTTGTTCCA +
Preference number: 5 (lower is better)
Translates to: ISYRGTRLMARRTALSLIYILLE*APLLVP
Trigger: TGGAACAAGGAGAGGAGCCAACTCTAGTAAAATGTA...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GCTACTGTTACCTTGATATTCATCGTAGAGAGCCAAAATGTACAAATATGTTTGCAGAAAAGGGCACAATaGGTTCCACTGAGATTGTAC +
Preference number: 5 (lower is better)
Translates to: ATVTLIFIVESQNVQICLQKRAQ*VPLRLY
Trigger: GTACAATCTCAGTGGAACCAATTGTGCCCTTTTCTG...CAAACATATTTGTACATTTTGGCTCTCTACGATGAATATCAAGGTAACAGTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTATTCTGTTCCATCACTTaGCATACTTGGTATGTGTGG +
Preference number: 5 (lower is better)
Translates to: QFFKVQYCERLMPLKILLFCSIT*HTWYVW
Trigger: CCACACATACCAAGTATGCAAAGTGATGGAACAGAA...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAATGGAGCTGCTTGATTaGTGGTTACATTTACAGACA +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLMELLD*WLHLQT
Trigger: TGTCTGTAAATGTAACCACAAATCAAGCAGCTCCAT...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAATGGAGCTGCTTGATTaGTGGTTACATTTACAGACA +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEMELLD*WLHLQT
Trigger: TGTCTGTAAATGTAACCACAAATCAAGCAGCTCCAT...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATGGAGCTGCTTGATTaGTGGTTACATTTACAGACA +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFMELLD*WLHLQT
Trigger: TGTCTGTAAATGTAACCACAAATCAAGCAGCTCCAT...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTATGGAGATGGAGCTGCTaGATTTGTGGTTACATTTAC +
Preference number: 5 (lower is better)
Translates to: QFFKVQYCERLMPLKILLWRWSC*ICGYIY
Trigger: GTAAATGTAACCACAAATCAAGCAGCTCCATCTCCA...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTCCTACTTTAAGGGTTTaGATAGCCACAGGTAATTCT +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFPTLRV*IATGNS
Trigger: AGAATTACCTGTGGCTATCAAAACCCTTAAAGTAGG...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACCTACTTTAAGGGTTTaGATAGCCACAGGTAATTCT +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLPTLRV*IATGNS
Trigger: AGAATTACCTGTGGCTATCAAAACCCTTAAAGTAGG...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACCTACTTTAAGGGTTTaGATAGCCACAGGTAATTCT +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEPTLRV*IATGNS
Trigger: AGAATTACCTGTGGCTATCAAAACCCTTAAAGTAGG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAATCACTGGTTTACTTTaGGTCACCACACCTTCTAAA +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEITGLL*VTTPSK
Trigger: TTTAGAAGGTGTGGTGACCAAAAGTAAACCAGTGAT...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAATCACTGGTTTACTTTaGGTCACCACACCTTCTAAA +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLITGLL*VTTPSK
Trigger: TTTAGAAGGTGTGGTGACCAAAAGTAAACCAGTGAT...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATCACTGGTTTACTTTaGGTCACCACACCTTCTAAA +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFITGLL*VTTPSK
Trigger: TTTAGAAGGTGTGGTGACCAAAAGTAAACCAGTGAT...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTCACACAAGGTTACTGTaGATTAAGATGTTTCTGGCA +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFHTRLL*IKMFLA
Trigger: TGCCAGAAACATCTTAATCAACAGTAACCTTGTGTG...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAACACACAAGGTTACTGTaGATTAAGATGTTTCTGGCA +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEHTRLL*IKMFLA
Trigger: TGCCAGAAACATCTTAATCAACAGTAACCTTGTGTG...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATATTCCATTTCTCACACTaGCAGATGAGATTGGCATTT +
Preference number: 5 (lower is better)
Translates to: QYCERLMPLKILLLAITIFHFSH*QMRLAF
Trigger: AAATGCCAATCTCATCTGCAAGTGTGAGAAATGGAA...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTTTCCATTTCTCACACTaGCAGATGAGATTGGCATTT +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFFHFSH*QMRLAF
Trigger: AAATGCCAATCTCATCTGCAAGTGTGAGAAATGGAA...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATATTGTTAAACTTTGCCTaGGATTATGGCCTCACTACA +
Preference number: 5 (lower is better)
Translates to: QYCERLMPLKILLLAITILLNFA*DYGLTT
Trigger: TGTAGTGAGGCCATAATCCAAGGCAAAGTTTAACAA...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATTGTTAAACTTTGCCTaGGATTATGGCCTCACTACA +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLLLNFA*DYGLTT
Trigger: TGTAGTGAGGCCATAATCCAAGGCAAAGTTTAACAA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATTTCTTACAGGGGTACAAGATTAATGGCTAGAAGAACTGCATTGTCACTGATATCAAGTATCAGTCTGTaGAAAATTACTCCCTGTACC +
Preference number: 5 (lower is better)
Translates to: ISYRGTRLMARRTALSLISSISL*KITPCT
Trigger: GGTACAGGGAGTAATTTTCAACAGACTGATACTTGA...TATCAGTGACAATGCAGTTCTTCTAGCCATTAATCTTGTACCCCTGTAAGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTATCAAGTATCAGTCTGTaGAAAATTACTCCCTGTACC +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLSSISL*KITPCT
Trigger: GGTACAGGGAGTAATTTTCAACAGACTGATACTTGA...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAATCAAGTATCAGTCTGTaGAAAATTACTCCCTGTACC +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHESSISL*KITPCT
Trigger: GGTACAGGGAGTAATTTTCAACAGACTGATACTTGA...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATGGACAAAGCATATGTGTTATCAAGTAGATATGATCTGGTGGACCGTGAGAATGCATTAACCATGCAGTaGTTAACAATACAGGCTAAA +
Preference number: 5 (lower is better)
Translates to: MDKAYVLSSRYDLVDRENALTMQ*LTIQAK
Trigger: TTTAGCCTGTATTGTTAACAACTGCATGGTTAATGC...ATTCTCACGGTCCACCAGATCATATCTACTTGATAACACATATGCTTTGTCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp GAAATAATGGACAAAGCATATGTGTTATCAAGTAGATATGATCTGGTGGACCGTGCACAAATGGGTTCCTaGAGTGTCCAAAGAAATAAT +
Preference number: 5 (lower is better)
Translates to: EIMDKAYVLSSRYDLVDRAQMGS*SVQRNN
Trigger: ATTATTTCTTTGGACACTCAAGGAACCCATTTGTGC...ACGGTCCACCAGATCATATCTACTTGATAACACATATGCTTTGTCCATTATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAATGGAGCTGCTTGATTaGTGGTTACATTTACAGACA +
Preference number: 5 (lower is better)
Translates to: QFFKVQYCERLMPLKILLMELLD*WLHLQT
Trigger: TGTCTGTAAATGTAACCACAAATCAAGCAGCTCCAT...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp TATCAAGTAGATATGATCTGGTGGACCGTGAGAATGAGATTCAGTAAATTTAGACCTACTTTAAGGGTTTaGATAGCCACAGGTAATTCT +
Preference number: 5 (lower is better)
Translates to: YQVDMIWWTVRMRFSKFRPTLRV*IATGNS
Trigger: AGAATTACCTGTGGCTATCAAAACCCTTAAAGTAGG...TCTAAATTTACTGAATCTCATTCTCACGGTCCACCAGATCATATCTACTTGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAATCACTGGTTTACTTTaGGTCACCACACCTTCTAAA +
Preference number: 5 (lower is better)
Translates to: QFFKVQYCERLMPLKILLITGLL*VTTPSK
Trigger: TTTAGAAGGTGTGGTGACCAAAAGTAAACCAGTGAT...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACACACAAGGTTACTGTaGATTAAGATGTTTCTGGCA +
Preference number: 5 (lower is better)
Translates to: QFFKVQYCERLMPLKILLHTRLL*IKMFLA
Trigger: TGCCAGAAACATCTTAATCAACAGTAACCTTGTGTG...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GCTACTGTTACCTTGATATTCATCGTAGAGAGCCAAAATGTACAAATATGTTTGCACACAAGGTTACTGTaGATTAAGATGTTTCTGGCA +
Preference number: 5 (lower is better)
Translates to: ATVTLIFIVESQNVQICLHTRLL*IKMFLA
Trigger: TGCCAGAAACATCTTAATCAACAGTAACCTTGTGTG...CAAACATATTTGTACATTTTGGCTCTCTACGATGAATATCAAGGTAACAGTAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511294.1
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAGCTTGTCCAACATGTaGACTATTTCATCAAACTTG +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFSLSNM*TISSNL
Trigger: CAAGTTTGATGAAATAGTCAACATGTTGGACAAGCT...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAAAGCTTGTCCAACATGTaGACTATTTCATCAAACTTG +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHESLSNM*TISSNL
Trigger: CAAGTTTGATGAAATAGTCAACATGTTGGACAAGCT...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp GTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTACATGAATACATTCTGGAACACTaGCTCCTATATGTTGCTAAA +
Preference number: 5 (lower is better)
Translates to: VLFTKCRIIHLKKRHLHEYILEH*LLYVAK
Trigger: TTTAGCAACATATAGGAGCAAGTGTTCCAGAATGTA...TTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp AATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTTACATTCTGGAACACTaGCTCCTATATGTTGCTAAA +
Preference number: 5 (lower is better)
Translates to: NLSAVYKVQNHSLEEATFYILEH*LLYVAK
Trigger: TTTAGCAACATATAGGAGCAAGTGTTCCAGAATGTA...AAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp CAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTACTGGCAATTACAATAATGCCCCTTAAGATATaGCTACTGGCAATTACAATA +
Preference number: 5 (lower is better)
Translates to: QYCERLMPLKILLLAITIMPLKI*LLAITI
Trigger: TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCAT...TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTGAAGAAGCGACATTTAATGCCCCTTAAGATATaGCTACTGGCAATTACAATA +
Preference number: 5 (lower is better)
Translates to: ISVLFTKCRIIHLKKRHLMPLKI*LLAITI
Trigger: TATTGTAATTGCCAGTAGCAATATCTTAAGGGGCAT...TAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS-3UTR CAA 90 bp CAATTTTTCAAAGTCCAATACTGTGAAAGACTCATGCCCCTTAAGATATTGCTAAGCTTGTCCAACATGTaGACTATTTCATCAAACTTG +
Preference number: 5 (lower is better)
Translates to: QFFKVQYCERLMPLKILLSLSNM*TISSNL
Trigger: CAAGTTTGATGAAATAGTCAACATGTTGGACAAGCT...TAGCAATATCTTAAGGGGCATGAGTCTTTCACAGTATTGGACTTTGAAAAATTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273854.7
ENST00000613740.5
ENST00000622150.4
CDS GCA 72 bp GGGACTGACGGCTGCCGGCCGGTAGGAGCGCGGAGCTaGGCTGCGGCGGCCCAGGAGCTGCTGCGGTTCCCG +
Preference number: 6 (lower is better)
Translates to: GTDGCRPVGARS*AAAAQELLRFP
Trigger: CGGGAACCGCAGCAGCTCCTGGGCCGCCGCAGCGCAGCTCCGCGCTCCTACCGGCCGGCAGCCGTCAGTCCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS CCA 72 bp CCGTCGAGGTGCAGAGTAGCAGCCGGCCAGGGACGCTaGGGTGATGGGGGTGTCGCCGCCGCCGCTTGGGGG +
Preference number: 6 (lower is better)
Translates to: PSRCRVAAGQGR*GDGGVAAAAWG
Trigger: CCCCCAAGCGGCGGCGGCGACACCCCCATCACCCCAGCGTCCCTGGCCGGCTGCTACTCTGCACCTCGACGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS TCA 72 bp AATAGCTGCGGGCTGAGTGCTGAAGAGGGGAGGGACTaGCGGCTGCCGGCCGGTAGGAGCGCGGAGCTGCGC +
Preference number: 6 (lower is better)
Translates to: NSCGLSAEEGRD*RLPAGRSAELR
Trigger: GCGCAGCTCCGCGCTCCTACCGGCCGGCAGCCGTCAGTCCCTCCCCTCTTCAGCACTCAGCCCGCAGCTATT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS GCA 72 bp TCCCGCTGCTCGGGGAGCAGGCGGTGTGTGCGCGGCTaGGAAGTCGAGGTTGAAACTGCACCGCCAAGGCGC +
Preference number: 6 (lower is better)
Translates to: SRCSGSRRCVRG*EVEVETAPPRR
Trigger: GCGCCTTGGCGGTGCAGTTTCAACCTCGACTTCGCAGCCGCGCACACACCGCCTGCTCCCCGAGCAGCGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS GCA 72 bp CAGGAGAAGGCACGTCCAGAGGGGAGCCCGTCGAGGTaGAGAGTAGCAGCCGGCCAGGGACGCTGGGGTGAT +
Preference number: 6 (lower is better)
Translates to: QEKARPEGSPSR*RVAAGQGRWGD
Trigger: ATCACCCCAGCGTCCCTGGCCGGCTGCTACTCTGCACCTCGACGGGCTCCCCTCTGGACGTGCCTTCTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS TCA 72 bp GAGCAGGCGGTGTGTGCGCGGCTGCGAAGTCGAGGTTaGAACTGCACCGCCAAGGCGCGCTCCTGCTGTGTC +
Preference number: 6 (lower is better)
Translates to: EQAVCARLRSRG*NCTAKARSCCV
Trigger: GACACAGCAGGAGCGCGCCTTGGCGGTGCAGTTTCAACCTCGACTTCGCAGCCGCGCACACACCGCCTGCTC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511294.1
ENST00000622150.4
CDS CAA 72 bp GGAGCAGGCGGTGTGTGCGCGGCTGCGAAGTCGAGGTaGAAACTGCACCGCCAAGGCGCGCTCCTGCTGTGT +
Preference number: 6 (lower is better)
Translates to: GAGGVCAAAKSR*KLHRQGALLLC
Trigger: ACACAGCAGGAGCGCGCCTTGGCGGTGCAGTTTCAACCTCGACTTCGCAGCCGCGCACACACCGCCTGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511294.1
ENST00000622150.4
CDS GCA 72 bp GTAGGAACCACGGATCCGGCTGAGACAGCTGAAGTTTaGTTCTGGCTCCTCTCGCCTCCCCCTTTGGTGGGG +
Preference number: 6 (lower is better)
Translates to: VGTTDPAETAEV*FWLLSPPPLVG
Trigger: CCCCACCAAAGGGGGAGGCGAGAGGAGCCAGAAGCAAACTTCAGCTGTCTCAGCCGGATCCGTGGTTCCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000432638.6
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS TCA 72 bp GTTCAAAGAGACTGGCAGAAGGAAATAGCTGCGGGCTaGGTGCTGAAGAGGGGAGGGACTGACGGCTGCCGG +
Preference number: 6 (lower is better)
Translates to: VQRDWQKEIAAG*VLKRGGTDGCR
Trigger: CCGGCAGCCGTCAGTCCCTCCCCTCTTCAGCACTCAGCCCGCAGCTATTTCCTTCTGCCAGTCTCTTTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS TCA 72 bp TTTTTCAGGCCGCTTTGCCGGGGAAGGTACCTGACATaGCCGCCACACTCCTCACACACACCTGCATGGGAG +
Preference number: 6 (lower is better)
Translates to: FFRPLCRGRYLT*PPHSSHTPAWE
Trigger: CTCCCATGCAGGTGTGTGTGAGGAGTGTGGCGGTCATGTCAGGTACCTTCCCCGGCAAAGCGGCCTGAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS CCA 72 bp TGCGTGAATCCAATAAATTCACTTCGTTGCTGGGGCTaGCCAGGAGGGTCCGGAGTGCGGCGCACAGGAGAA +
Preference number: 6 (lower is better)
Translates to: CVNPINSLRCWG*PGGSGVRRTGE
Trigger: TTCTCCTGTGCGCCGCACTCCGGACCCTCCTGGCCAGCCCCAGCAACGAAGTGAATTTATTGGATTCACGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS TCA 72 bp AGGTGTTTTTCAGGCCGCTTTGCCGGGGAAGGTACCTaGCATGACCGCCACACTCCTCACACACACCTGCAT +
Preference number: 6 (lower is better)
Translates to: RCFSGRFAGEGT*HDRHTPHTHLH
Trigger: ATGCAGGTGTGTGTGAGGAGTGTGGCGGTCATGTCAGGTACCTTCCCCGGCAAAGCGGCCTGAAAAACACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS CCA 72 bp ACCACGGATCCGGCTGAGACAGCTGAAGTTTGCTTCTaGCTCCTCTCGCCTCCCCCTTTGGTGGGGTTAAAT +
Preference number: 6 (lower is better)
Translates to: TTDPAETAEVCF*LLSPPPLVGLN
Trigger: ATTTAACCCCACCAAAGGGGGAGGCGAGAGGAGCCAGAAGCAAACTTCAGCTGTCTCAGCCGGATCCGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000432638.6
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS GCA 72 bp ACACCGCCTTCCACTGAGGAGGACGCCGATAACCACTaGCAACAAAATGACTCCCACTGTCACAGACACAGC +
Preference number: 6 (lower is better)
Translates to: TPPSTEEDADNH*QQNDSHCHRHS
Trigger: GCTGTGTCTGTGACAGTGGGAGTCATTTTGTTGGCAGTGGTTATCGGCGTCCTCCTCAGTGGAAGGCGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354839.8
ENST00000613740.5
CDS CAA 72 bp ATCCACCATCATGACAGAGGTGTTTTTCAGGCCGCTTaGCCGGGGAAGGTACCTGACATGACCGCCACACTC +
Preference number: 6 (lower is better)
Translates to: IHHHDRGVFQAA*PGKVPDMTATL
Trigger: GAGTGTGGCGGTCATGTCAGGTACCTTCCCCGGCAAAGCGGCCTGAAAAACACCTCTGTCATGATGGTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS TCA 72 bp GTGAGGTGGACATTTGCCGCAGCTCTGGATGTGAGGTaGGGCTTTGAAGAACCCAGGTCTGCACACTTGACA +
Preference number: 6 (lower is better)
Translates to: VRWTFAAALDVR*GFEEPRSAHLT
Trigger: TGTCAAGTGTGCAGACCTGGGTTCTTCAAAGCCTCACCTCACATCCAGAGCTGCGGCAAATGTCCACCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS GCA 72 bp GCAGCAACTTCCACTGAGGAGGACGCCGATAACCACTaGCAACAAAATGACTCCCACTGTCACAGACACAGC +
Preference number: 6 (lower is better)
Translates to: AATSTEEDADNH*QQNDSHCHRHS
Trigger: GCTGTGTCTGTGACAGTGGGAGTCATTTTGTTGGCAGTGGTTATCGGCGTCCTCCTCAGTGGAAGTTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273854.7
ENST00000432638.6
ENST00000511294.1
ENST00000622150.4
CDS CCA 72 bp CCAGCATTAACTGATAGAGAGCAGCAGGACAATCCATaGGGCTTGGCAGACGATAGCCTTCCTCTACCGCTT +
Preference number: 6 (lower is better)
Translates to: PALTDREQQDNP*GLADDSLPLPL
Trigger: AAGCGGTAGAGGAAGGCTATCGTCTGCCAAGCCCCATGGATTGTCCTGCTGCTCTCTATCAGTTAATGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS CAA 90 bp TCGGCGCTGCAGTGCATTTTGGGAGGTTCATCGGTCACAGAATGGTaGACACAGGAGCCTGACACTTCGAGCAATTGGGAAGAATCAGCT +
Preference number: 6 (lower is better)
Translates to: SALQCILGGSSVTEW*TQEPDTSSNWEESA
Trigger: AGCTGATTCTTCCCAATTGCTCGAAGTGTCAGGCTCCTGTGTCAACCATTCTGTGACCGATGAACCTCCCAAAATGCACTGCAGCGCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS TCA 72 bp CTGACACTTCGAGCAATTGGGAAGAATCAGCTCCAGTaGTGGTGTCAGGGAAGACAGCCAAGTGTCGTACCA +
Preference number: 6 (lower is better)
Translates to: LTLRAIGKNQLQ*WCQGRQPSVVP
Trigger: TGGTACGACACTTGGCTGTCTTCCCTGACACCATCACTGGAGCTGATTCTTCCCAATTGCTCGAAGTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS TCA 72 bp GTCACTCCAAGCCGTCTCAAATCCTCCAAGGTCACCTaGGCCACAGCGTCCATTGAACTGTATCCATTTTCC +
Preference number: 6 (lower is better)
Translates to: VTPSRLKSSKVT*ATASIELYPFS
Trigger: GGAAAATGGATACAGTTCAATGGACGCTGTGGCTCAGGTGACCTTGGAGGATTTGAGACGGCTTGGAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS TCA 72 bp AGTGCATTTTGGGAGGTTCATCGGTCACAGAATGGTTaGCACAGGAGCCTGACACTTCGAGCAATTGGGAAG +
Preference number: 6 (lower is better)
Translates to: SAFWEVHRSQNG*HRSLTLRAIGK
Trigger: CTTCCCAATTGCTCGAAGTGTCAGGCTCCTGTGTCAACCATTCTGTGACCGATGAACCTCCCAAAATGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS TCA 72 bp AGGTATAGTTTGTGTGAGCGAGTAGATCCACCATCATaGCAGAGGTGTTTTTCAGGCCGCTTTGCCGGGGAA +
Preference number: 6 (lower is better)
Translates to: RYSLCERVDPPS*QRCFSGRFAGE
Trigger: TTCCCCGGCAAAGCGGCCTGAAAAACACCTCTGTCATGATGGTGGATCTACTCGCTCACACAAACTATACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS TCA 72 bp CTGACACTGGGGTGGTTTCAAACTCAAATCTTCGACTaGAGACACCATAGCCTGCTGCTGTACGTGCTCGAA +
Preference number: 6 (lower is better)
Translates to: LTLGWFQTQIFD*RHHSLLLYVLE
Trigger: TTCGAGCACGTACAGCAGCAGGCTATGGTGTCTTCAGTCGAAGATTTGAGTTTGAAACCACCCCAGTGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432638.6
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS CAA 72 bp CAGTGCATTTTGGGAGGTTCATCGGTCACAGAATGGTaGACACAGGAGCCTGACACTTCGAGCAATTGGGAA +
Preference number: 6 (lower is better)
Translates to: QCILGGSSVTEW*TQEPDTSSNWE
Trigger: TTCCCAATTGCTCGAAGTGTCAGGCTCCTGTGTCAACCATTCTGTGACCGATGAACCTCCCAAAATGCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS TCA 72 bp TGCATGGGAGTTGCACTTCTTGCATGCAATATAATATaGCACGTCTTTCCTTCCACCAGTGTCAGCAGGCGG +
Preference number: 6 (lower is better)
Translates to: CMGVALLACNII*HVFPSTSVSRR
Trigger: CCGCCTGCTGACACTGGTGGAAGGAAAGACGTGTCATATTATATTGCATGCAAGAAGTGCAACTCCCATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS TCA 72 bp CAAACACTGGGGTGGTTTCAAACTCAAATCTTCGACTaGAGACACCATAGCCTGCTGCTGTACGTGCTCGAA +
Preference number: 6 (lower is better)
Translates to: QTLGWFQTQIFD*RHHSLLLYVLE
Trigger: TTCGAGCACGTACAGCAGCAGGCTATGGTGTCTTCAGTCGAAGATTTGAGTTTGAAACCACCCCAGTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273854.7
ENST00000354839.8
CDS GCA 72 bp GACCGCCACACTCCTCACACACACCTGCATGGGAGTTaGACTTCTTGCATGCAATATAATATGACACGTCTT +
Preference number: 6 (lower is better)
Translates to: DRHTPHTHLHGS*TSCMQYNMTRL
Trigger: AAGACGTGTCATATTATATTGCATGCAAGAAGTGCAACTCCCATGCAGGTGTGTGTGAGGAGTGTGGCGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS CCA 72 bp CAGACACAGCAATTACAGGAATCTGGCTTTGATCGCTaGATGCTGCAACTGACACTGGGGTGGTTTCAAACT +
Preference number: 6 (lower is better)
Translates to: QTQQLQESGFDR*MLQLTLGWFQT
Trigger: AGTTTGAAACCACCCCAGTGTCAGTTGCAGCATCCAGCGATCAAAGCCAGATTCCTGTAATTGCTGTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000432638.6
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS CCA 72 bp CAGACACAGCAATTACAGGAATCTGGCTTTGATCGCTaGATGCTGCAAACACTGGGGTGGTTTCAAACTCAA +
Preference number: 6 (lower is better)
Translates to: QTQQLQESGFDR*MLQTLGWFQTQ
Trigger: TTGAGTTTGAAACCACCCCAGTGTTTGCAGCATCCAGCGATCAAAGCCAGATTCCTGTAATTGCTGTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273854.7
ENST00000354839.8
CDS TCA 72 bp TGCTGCTGTACGTGCTCGAATTTGGAAGACATAAACTaGAGCTGGTTTCAAGCCCTCTGCAGTAATAGTTGT +
Preference number: 6 (lower is better)
Translates to: CCCTCSNLEDIN*SWFQALCSNSC
Trigger: ACAACTATTACTGCAGAGGGCTTGAAACCAGCTTCAGTTTATGTCTTCCAAATTCGAGCACGTACAGCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS GCA 72 bp TTCAAACTCAAATCTTCGACTGAAGACACCATAGCCTaGTGCTGTACGTGCTCGAATTTGGAAGACATAAAC +
Preference number: 6 (lower is better)
Translates to: FKLKSSTEDTIA*CCTCSNLEDIN
Trigger: GTTTATGTCTTCCAAATTCGAGCACGTACAGCAGCAGGCTATGGTGTCTTCAGTCGAAGATTTGAGTTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000511294.1
ENST00000613740.5
ENST00000622150.4
CDS TCA 72 bp TCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTTaGAGAAGCGACATTTACATGAAGTTACAATGGCAC +
Preference number: 6 (lower is better)
Translates to: SQCCLQSAESFT*RSDIYMKLQWH
Trigger: GTGCCATTGTAACTTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4
CDS CAA 72 bp ATCTCAGTGCTGTTTACAAAGTGCAGAATCATTCACTaGAAGAAGCGACATTTACATGAAGTTACAATGGCA +
Preference number: 6 (lower is better)
Translates to: ISVLFTKCRIIH*KKRHLHEVTMA
Trigger: TGCCATTGTAACTTCATGTAAATGTCGCTTCTTCAAGTGAATGATTCTGCACTTTGTAAACAGCACTGAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273854.7
ENST00000354839.8
ENST00000432638.6
ENST00000613740.5
ENST00000622150.4