RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPHA3 (Homo sapiens)

Ensembl gene IDs: ENSG00000044524

Ensembl transcript IDs: ENST00000336596.7, ENST00000452448.6, ENST00000494014.1

Found 389 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGTaGTTTACACGGGAACTGGGCCATTCTTTGATTGCGTTTCTAGAG +
Preference number: 1 (lower is better)
Translates to: RLPQPPLPSRSTSVP*FTRELGHSLIAFLE
Trigger: CTCTAGAAACGCAATCAAAGAATGGCCCAGTTCCCGTGTAAAGCACGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
3UTR TCA 90 bp TGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTGCAGGATaGTGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTT +
Preference number: 1 (lower is better)
Translates to: WNFHQYLQNYCLSAG*CYAFHSHHFRPEAL
Trigger: AAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
3UTR GCA 90 bp TTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTaGAGGATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGA +
Preference number: 1 (lower is better)
Translates to: LDLELPPVSPELLSV*RMMLRLPQPPLPSR
Trigger: TCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
3UTR GCA 90 bp CACTTCCGTCCCGTGCTTTACACGGGAACTGGGCCATTCTTTGATTaGGTTTCTAGAGCTTTAATGCTACTGATGATCTTCTTCTGTGGC +
Preference number: 1 (lower is better)
Translates to: HFRPVLYTGTGPFFD*VSRALMLLMIFFCG
Trigger: GCCACAGAAGAAGATCATCAGTAGCATTAAAGCTCTAGAAACGCAATCAAAGAATGGCCCAGTTCCCGTGTAAAGCACGGGACGGAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
3UTR CCA 90 bp CCTGTACAAAGAGATGGCCGTAAGCATTCTAGTACCTCTACTCCATaGTTAAGAATCGTACACTTATGTTTACATATGTACAGGGTAAGA +
Preference number: 1 (lower is better)
Translates to: PVQRDGRKHSSTSTP*LRIVHLCLHMYRVR
Trigger: TCTTACCCTGTACATATGTAAACATAAGTGTACGATTCTTAACCATGGAGTAGAGGTACTAGAATGCTTACGGCCATCTCTTTGTACAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336596.7
3UTR GCA 90 bp TGTACACCCACACAAACACAAATACTGTATACAGACACAGGGCTCTaGAAATTGCAATGTCCCAAGCAATATACCTTAAATGTATCACAT +
Preference number: 1 (lower is better)
Translates to: CTPTQTQILYTDTGL*KLQCPKQYTLNVSH
Trigger: ATGTGATACATTTAAGGTATATTGCTTGGGACATTGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGTGTTTGTGTGGGTGTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
3UTR TCA 90 bp AGTCTTATTACACTAAATCTACAACAGATGAGCACTTGTGAGTTTTaGTTTGCGATTGTAAGCTGTGTTTCATTAGCGTTCCATTTTGCA +
Preference number: 1 (lower is better)
Translates to: SLITLNLQQMSTCEF*FAIVSCVSLAFHFA
Trigger: TGCAAAATGGAACGCTAATGAAACACAGCTTACAATCGCAAATCAAAACTCACAAGTGCTCATCTGTTGTAGATTTAGTGTAATAAGACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336596.7
3UTR TCA 90 bp CAATCTAAGTCTTATTACACTAAATCTACAACAGATGAGCACTTGTaGGTTTTGATTTGCGATTGTAAGCTGTGTTTCATTAGCGTTCCA +
Preference number: 1 (lower is better)
Translates to: QSKSYYTKSTTDEHL*VLICDCKLCFISVP
Trigger: TGGAACGCTAATGAAACACAGCTTACAATCGCAAATCAAAACTCACAAGTGCTCATCTGTTGTAGATTTAGTGTAATAAGACTTAGATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336596.7
3UTR CCA 90 bp GCAGGAAAGGTATGTTATCTGGTTGAAAATCCATTGCATACAAGCTaGTATATTACACTAAGTTGTGAGCATACAGTTTATAATAAACGG +
Preference number: 1 (lower is better)
Translates to: AGKVCYLVENPLHTS*YITLSCEHTVYNKR
Trigger: CCGTTTATTATAAACTGTATGCTCACAACTTAGTGTAATATACCAGCTTGTATGCAATGGATTTTCAACCAGATAACATACCTTTCCTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336596.7
3UTR-3UTR CCA 90 bp TTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGTGCTTTACACGGGGATGATCTTCTTCTGTaGCCCAACCACGGTGACACC +
Preference number: 2 (lower is better)
Translates to: FHSHHFRPEALPSRALHGDDLLL*PNHGDT
Trigger: GGTGTCACCGTGGTTGGGCCACAGAAGAAGATCATC...CCCGTGTAAAGCACGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494014.1
3UTR CAA 90 bp AGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATaGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCACCACTT +
Preference number: 2 (lower is better)
Translates to: SVLLDLELPPVSPEL*SVCRMMLRLPQPPL
Trigger: AAGTGGTGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
3UTR-3UTR TCA 90 bp TTCAATCCTTCTAAGTTACACACCAAAACTGCACCATGTGCATTGAAGTGGAAGTGTCTGTCTGCAGGATaGTGCTACGCCTTCCACAGC +
Preference number: 2 (lower is better)
Translates to: FNPSKLHTKTAPCALKWKCLSAG*CYAFHS
Trigger: GCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACA...CTTCCACTTCAATGCACATGGTGCAGTTTTGGTGTGTAACTTAGAAGGATTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336596.7
3UTR-3UTR TCA 90 bp TGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTGTGTCTGTCTGCAGGATaGTGCTACGCCTTCCACAGC +
Preference number: 2 (lower is better)
Translates to: CLIGLGTSTSISRIIVCLCLSAG*CYAFHS
Trigger: GCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACA...CAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
3UTR-3UTR GCA 90 bp ACCCACACAAACACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCAATGCGATCAGACATCTTTTaGAAGATCCCTGCCCCCTCC +
Preference number: 2 (lower is better)
Translates to: THTNTNTVYRHRALQIAMRSDIF*KIPAPS
Trigger: GGAGGGGGCAGGGATCTTGCAAAAGATGTCTGATCG...CATTGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGTGTTTGTGTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452448.6
3UTR-3UTR GCA 90 bp ATTGAATCACGCAATGAACCTGGAATATCTGAAATGACAGACACTGGAAGTGTGACAGACACAGGGCTCTaGAAATTGCAATGTCCCAAG +
Preference number: 2 (lower is better)
Translates to: IESRNEPGISEMTDTGSVTDTGL*KLQCPK
Trigger: CTTGGGACATTGCAATTTGCAGAGCCCTGTGTCTGT...CACACTTCCAGTGTCTGTCATTTCAGATATTCCAGGTTCATTGCGTGATTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
3UTR-3UTR GCA 90 bp GAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTGAATTATTGTCTGTCTaGAGGATGATGCTACGCCTT +
Preference number: 2 (lower is better)
Translates to: ECLIGLGTSTSISRIIVCELLSV*RMMLRL
Trigger: AAGGCGTAGCATCATCCTGCAGACAGACAATAATTC...ACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
3UTR-3UTR CCA 90 bp TGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTGGTGTCTTATTGGACTTaGAACTTCCACCAGTATCTC +
Preference number: 2 (lower is better)
Translates to: CLIGLGTSTSISRIIVCLVSYWT*NFHQYL
Trigger: GAGATACTGGTGGAAGTTCCAAGTCCAATAAGACAC...CAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
3UTR-3UTR CCA 90 bp TTCAATCCTTCTAAGTTACACACCAAAACTGCACCATGTGCATTGAAGTGGAAGTTTTTACTCATGCATTaGCCTATAGGCTGTGTTGTC +
Preference number: 2 (lower is better)
Translates to: FNPSKLHTKTAPCALKWKFLLMH*PIGCVV
Trigger: GACAACACAGCCTATAGGCCAATGCATGAGTAAAAA...CTTCCACTTCAATGCACATGGTGCAGTTTTGGTGTGTAACTTAGAAGGATTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336596.7
3UTR CAA 90 bp TCCATTTTAAGGCATTTGTACTCATATTTGAGTGTCTTATTGGACTaGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTGCAGG +
Preference number: 2 (lower is better)
Translates to: SILRHLYSYLSVLLD*ELPPVSPELLSVCR
Trigger: CCTGCAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATATGAGTACAAATGCCTTAAAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
3UTR CAA 90 bp CTAAGCACCAGAGCAGGAAAGGTATGTTATCTGGTTGAAAATCCATaGCATACAAGCTGGTATATTACACTAAGTTGTGAGCATACAGTT +
Preference number: 2 (lower is better)
Translates to: LSTRAGKVCYLVENP*HTSWYITLSCEHTV
Trigger: AACTGTATGCTCACAACTTAGTGTAATATACCAGCTTGTATGCAATGGATTTTCAACCAGATAACATACCTTTCCTGCTCTGGTGCTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336596.7
3UTR CAA 90 bp CCCACACAAACACAAATACTGTATACAGACACAGGGCTCTGCAAATaGCAATGTCCCAAGCAATATACCTTAAATGTATCACATTTGTTT +
Preference number: 2 (lower is better)
Translates to: PTQTQILYTDTGLCK*QCPKQYTLNVSHLF
Trigger: AAACAAATGTGATACATTTAAGGTATATTGCTTGGGACATTGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGTGTTTGTGTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
3UTR CAA 90 bp TTCAATTCCATTTTAAGGCATTTGTACTCATATTTGAGTGTCTTATaGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTC +
Preference number: 2 (lower is better)
Translates to: FNSILRHLYSYLSVL*DLELPPVSPELLSV
Trigger: GACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATATGAGTACAAATGCCTTAAAATGGAATTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
3UTR TCA 72 bp TCCCAGCTACTCGGGAGGCTGAGGGGGAGAATGGCGTaGAGCCAGGAGGCGGAGCTTGCAGGAGCTTGCAGT +
Preference number: 3 (lower is better)
Translates to: SQLLGRLRGRMA*SQEAELAGACS
Trigger: ACTGCAAGCTCCTGCAAGCTCCGCCTCCTGGCTTCACGCCATTCTCCCCCTCAGCCTCCCGAGTAGCTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452448.6
3UTR TCA 72 bp GTGAAGCCAGGAGGCGGAGCTTGCAGGAGCTTGCAGTaGGCCGAGATCGCTCTGCTGTACTCCAGCCTGGGT +
Preference number: 3 (lower is better)
Translates to: VKPGGGACRSLQ*AEIALLYSSLG
Trigger: ACCCAGGCTGGAGTACAGCAGAGCGATCTCGGCTCACTGCAAGCTCCTGCAAGCTCCGCCTCCTGGCTTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
3UTR GCA 72 bp CAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGTaGTTTACACGGGAACTGGGCCATTCTTTGATTGCG +
Preference number: 3 (lower is better)
Translates to: QPPLPSRSTSVP*FTRELGHSLIA
Trigger: CGCAATCAAAGAATGGCCCAGTTCCCGTGTAAAGCACGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
3UTR TCA 72 bp CACCAGTATCTCCAGAATTATTGTCTGTCTGCAGGATaGTGCTACGCCTTCCACAGCCACCACTTCCGTCCA +
Preference number: 3 (lower is better)
Translates to: HQYLQNYCLSAG*CYAFHSHHFRP
Trigger: TGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATACTGGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
3UTR GCA 72 bp GAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTaGAGGATGATGCTACGCCTTCCACAGCCACCACTT +
Preference number: 3 (lower is better)
Translates to: ELPPVSPELLSV*RMMLRLPQPPL
Trigger: AAGTGGTGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
3UTR-3UTR CAA 90 bp ATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCACCGAACTGGGCCATTCTTaGATTGCGTTTCTAGAGCTT +
Preference number: 3 (lower is better)
Translates to: ISRIIVCLQDDATPSTATELGHS*IAFLEL
Trigger: AAGCTCTAGAAACGCAATCAAAGAATGGCCCAGTTC...GGTGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
3UTR-3UTR CAA 90 bp CTGTATACAGACACAGGGCTCTGCAAATTGCAATGTCCCAAGCAATATACCTTAACGATCAGACATCTTTaGCAAGATCCCTGCCCCCTC +
Preference number: 3 (lower is better)
Translates to: LYTDTGLCKLQCPKQYTLTIRHL*QDPCPL
Trigger: GAGGGGGCAGGGATCTTGCAAAAGATGTCTGATCGT...TAAGGTATATTGCTTGGGACATTGCAATTTGCAGAGCCCTGTGTCTGTATACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452448.6
3UTR-3UTR CAA 90 bp AGTATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCGTATCTCCAGAATTATaGTCTGTCTGCAGGATGATG +
Preference number: 3 (lower is better)
Translates to: SISRIIVCLQDDATPSTAVSPEL*SVCRMM
Trigger: CATCATCCTGCAGACAGACAATAATTCTGGAGATAC...GGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATACT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
3UTR-3UTR CAA 90 bp CTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTGCAGAGTGTCTTATTGGACTaGGAACTTCCACCAGTATCT +
Preference number: 3 (lower is better)
Translates to: LIGLGTSTSISRIIVCLQSVLLD*ELPPVS
Trigger: AGATACTGGTGGAAGTTCCAAGTCCAATAAGACACT...CTGCAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
3UTR-3UTR CAA 90 bp GGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTGCAGGATGATTATTTGAGTGTCTTATaGGACTTGGAACTTCCACCA +
Preference number: 3 (lower is better)
Translates to: GLGTSTSISRIIVCLQDDYLSVL*DLELPP
Trigger: TGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATA...ATCATCCTGCAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
3UTR-3UTR CAA 90 bp ATTGAATCACGCAATGAACCTGGAATATCTGAAATGACAGACACTGGAAGTGTGACAGGGCTCTGCAAATaGCAATGTCCCAAGCAATAT +
Preference number: 3 (lower is better)
Translates to: IESRNEPGISEMTDTGSVTGLCK*QCPKQY
Trigger: ATATTGCTTGGGACATTGCAATTTGCAGAGCCCTGT...CACACTTCCAGTGTCTGTCATTTCAGATATTCCAGGTTCATTGCGTGATTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
3UTR-3UTR CAA 90 bp TTCAATCCTTCTAAGTTACACACCAAAACTGCACCATGTGCATTGAAGTGGAAGGAGAGCATTTGGCACTaGGCTGTAACAAATCCATAT +
Preference number: 3 (lower is better)
Translates to: FNPSKLHTKTAPCALKWKESIWH*AVTNPY
Trigger: ATATGGATTTGTTACAGCCAAGTGCCAAATGCTCTC...CTTCCACTTCAATGCACATGGTGCAGTTTTGGTGTGTAACTTAGAAGGATTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336596.7
3UTR TCA 72 bp TCTAAGCACCAGAGCAGGAAAGGTATGTTATCTGGTTaGAAATCCATTGCATACAAGCTGGTATATTACACT +
Preference number: 3 (lower is better)
Translates to: SKHQSRKGMLSG*KSIAYKLVYYT
Trigger: AGTGTAATATACCAGCTTGTATGCAATGGATTTTCAACCAGATAACATACCTTTCCTGCTCTGGTGCTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336596.7
3UTR-3UTR CAA 90 bp ATATTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTAGTGTCTTATTGGACTaGGAACTTCCACCAGTATCT +
Preference number: 3 (lower is better)
Translates to: IFECLIGLGTSTSISRIISVLLD*ELPPVS
Trigger: AGATACTGGTGGAAGTTCCAAGTCCAATAAGACACT...AATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
3UTR TCA 72 bp CTTCTAAGTTACACACCAAAACTGCACCATGTGCATTaGAGTGGAAGACTCTTAAAGATAATAATACCTGGT +
Preference number: 3 (lower is better)
Translates to: LLSYTPKLHHVH*SGRLLKIIIPG
Trigger: ACCAGGTATTATTATCTTTAAGAGTCTTCCACTTCAATGCACATGGTGCAGTTTTGGTGTGTAACTTAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336596.7
3UTR TCA 72 bp ACACTAAATCTACAACAGATGAGCACTTGTGAGTTTTaGTTTGCGATTGTAAGCTGTGTTTCATTAGCGTTC +
Preference number: 3 (lower is better)
Translates to: TLNLQQMSTCEF*FAIVSCVSLAF
Trigger: GAACGCTAATGAAACACAGCTTACAATCGCAAATCAAAACTCACAAGTGCTCATCTGTTGTAGATTTAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336596.7
3UTR GCA 72 bp ACACAAACACAAATACTGTATACAGACACAGGGCTCTaGAAATTGCAATGTCCCAAGCAATATACCTTAAAT +
Preference number: 3 (lower is better)
Translates to: TQTQILYTDTGL*KLQCPKQYTLN
Trigger: ATTTAAGGTATATTGCTTGGGACATTGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGTGTTTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
3UTR TCA 72 bp CATTATTATCTGTGTCTAGTTAAATTGCTGACAATTTaGGAGAGCATTTGGCACTTGGCTGTAACAAATCCA +
Preference number: 3 (lower is better)
Translates to: HYYLCLVKLLTI*ESIWHLAVTNP
Trigger: TGGATTTGTTACAGCCAAGTGCCAAATGCTCTCTCAAATTGTCAGCAATTTAACTAGACACAGATAATAATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR CCA 90 bp CCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGTGCTTTACACGGGAAACCTCCACCAGGGACTaGGAGTCCATGGGTACCGTG +
Preference number: 4 (lower is better)
Translates to: PQPPLPSRSTSVPCFTRETSTRD*ESMGTV
Trigger: CACGGTACCCATGGACTCCCAGTCCCTGGTGGAGGT...TTCCCGTGTAAAGCACGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR TCA 90 bp TTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGTGCTTTACACGGGCATGAAGCATGCCACTaGTGTGAGGGGGAGCGCTCT +
Preference number: 4 (lower is better)
Translates to: FHSHHFRPEALPSRALHGHEACH*CEGERS
Trigger: AGAGCGCTCCCCCTCACATCAGTGGCATGCTTCATG...CCCGTGTAAAGCACGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR TCA 90 bp CCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGTGCTTTACACGCAGTCCAGCATCAGCTaGTACAAGGCAGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: PSTATTSVQKHFRPVLYTQSSIS*YKAAGQ
Trigger: CTGCCCAGCTGCCTTGTATCAGCTGATGCTGGACTG...CGTGTAAAGCACGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CCA 90 bp AGGATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCACCTCCACCAGGGACTaGGAGTCCATGGGTACCGTG +
Preference number: 4 (lower is better)
Translates to: RMMLRLPQPPLPSRSTSVTSTRD*ESMGTV
Trigger: CACGGTACCCATGGACTCCCAGTCCCTGGTGGAGGT...GACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp CACCACTTCCGTCCAGAAGCACTTCCGTCCCGTGCTTTACACGGGAACTGGGCCGTTCATCCACACCACTaGTCTCTTCCCACCCATGTG +
Preference number: 4 (lower is better)
Translates to: HHFRPEALPSRALHGNWAVHPHH*SLPTHV
Trigger: CACATGGGTGGGAAGAGATCAGTGGTGTGGATGAAC...GGCCCAGTTCCCGTGTAAAGCACGGGACGGAAGTGCTTCTGGACGGAAGTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR TCA 90 bp ATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGTCACCGTGGTGTTGGTaGGTCCAAACTGTCGAGGGA +
Preference number: 4 (lower is better)
Translates to: MMLRLPQPPLPSRSTSVPSPWCW*VQTVEG
Trigger: TCCCTCGACAGTTTGGACTCACCAACACCACGGTGA...CGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp ATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGTGCGGTGATGGAGCAGCCTaGTTAGTTGTGATGCTGACC +
Preference number: 4 (lower is better)
Translates to: MLRLPQPPLPSRSTSVPCGDGAA*LVVMLT
Trigger: GGTCAGCATCACAACTAATCAGGCTGCTCCATCACC...GCACGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp ATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGCTGGTGATGTCCACCTaGTTGGGATCTTCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: MMLRLPQPPLPSRSTSVPLVMST*LGSSLL
Trigger: GAGGAGGGAAGATCCCAATCAGGTGGACATCACCAG...CGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp ATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGTGCGTGGCCCAACCACGGTaGCACCAACCTTTTTCATGT +
Preference number: 4 (lower is better)
Translates to: MLRLPQPPLPSRSTSVPCVAQPR*HQPFSC
Trigger: ACATGAAAAAGGTTGGTGTCACCGTGGTTGGGCCAC...GCACGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp GATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCTGTCTGTCTGCAGGATaGTGCTACGCCTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: DDATPSTATTSVQKHFRPCLSAG*CYAFHS
Trigger: GCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACA...GGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CCA 90 bp ATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGGGGACTGGGAGTCCATaGGTACCGTGTCTGGAAACA +
Preference number: 4 (lower is better)
Translates to: MMLRLPQPPLPSRSTSVPGTGSP*VPCLET
Trigger: TGTTTCCAGACACGGTACCCATGGACTCCCAGTCCC...CGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp GATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCAGGAGGATGGAGAGCTaGCAATCCATGTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: DDATPSTATTSVQKHFRPRRMES*QSMLLV
Trigger: CACCAGCAACATGGATTGTCAGCTCTCCATCCTCCT...GGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp GATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCCTCTTCCCACCCATGTaGTGGATAAGAGATCCAGCC +
Preference number: 4 (lower is better)
Translates to: DDATPSTATTSVQKHFRPLFPPM*WIRDPA
Trigger: GGCTGGATCTCTTATCCATCACATGGGTGGGAAGAG...GGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp AGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGTGCTTTACACGGGAACTGGGTGGCCCAACCACGGTaGCACCAACCTTTTTCATGT +
Preference number: 4 (lower is better)
Translates to: SHHFRPEALPSRALHGNWVAQPR*HQPFSC
Trigger: ACATGAAAAAGGTTGGTGTCACCGTGGTTGGGCCAC...CCAGTTCCCGTGTAAAGCACGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CCA 90 bp AGGATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCGGTACAAGCCATGGATaGAGGGTCTTTGTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: RMMLRLPQPPLPSRSTSVGTSHG*RVFVCP
Trigger: CGGGCAGACAAAGACCCTCCATCCATGGCTTGTACC...GACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp CAGGATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCTCTTCCCACCCATGTaGTGGATAAGAGATCCAGCC +
Preference number: 4 (lower is better)
Translates to: QDDATPSTATTSVQKHFRLFPPM*WIRDPA
Trigger: GGCTGGATCTCTTATCCATCACATGGGTGGGAAGAG...ACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp GCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGTGCTTTACACAATCGTCAGGACAGGTaGTGGAGCAGCCTGATTAGT +
Preference number: 4 (lower is better)
Translates to: AFHSHHFRPEALPSRALHNRQDR*WSSLIS
Trigger: ACTAATCAGGCTGCTCCATCACCTGTCCTGACGATT...GTGTAAAGCACGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR TCA 90 bp TTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGTGCTTTACACGGGAATTGCTACTGCCGCTaGAATGGCGATCATGACCAC +
Preference number: 4 (lower is better)
Translates to: FHSHHFRPEALPSRALHGNCYCR*NGDHDH
Trigger: GTGGTCATGATCGCCATTTCAGCGGCAGTAGCAATT...CCCGTGTAAAGCACGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR TCA 90 bp TTCCGTCCAGAAGCACTTCCGTCCCGTGCTTTACACGGGAACTGGGCCATTCTTGTCCAGAAGAAGGTTTaGTGGCCTTGCGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: FRPEALPSRALHGNWAILVQKKV*WPCGCT
Trigger: AGTGCAGCCGCAAGGCCATCAAACCTTCTTCTGGAC...AAGAATGGCCCAGTTCCCGTGTAAAGCACGGGACGGAAGTGCTTCTGGACGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR GCA 90 bp ATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGTGCCTGACAGGTACTTCATaGCAGATGCTATCCCTCGAA +
Preference number: 4 (lower is better)
Translates to: MLRLPQPPLPSRSTSVPCLTGTS*QMLSLE
Trigger: TTCGAGGGATAGCATCTGGCATGAAGTACCTGTCAG...GCACGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CCA 90 bp CACCACTTCCGTCCAGAAGCACTTCCGTCCCGTGCTTTACACGGGAACTGGGCCAGGAACACTTGCCAATaGGTACAAGCCATTCGCCTT +
Preference number: 4 (lower is better)
Translates to: HHFRPEALPSRALHGNWARNTCQ*VQAIRL
Trigger: AAGGCGAATGGCTTGTACCCATTGGCAAGTGTTCCT...GGCCCAGTTCCCGTGTAAAGCACGGGACGGAAGTGCTTCTGGACGGAAGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR TCA 90 bp CCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGTGCTTTACACGGGAACTGAAATGGCGATCATaGCCACTTGGCTACTTTCAC +
Preference number: 4 (lower is better)
Translates to: PQPPLPSRSTSVPCFTRELKWRS*PLGYFH
Trigger: GTGAAAGTAGCCAAGTGGTCATGATCGCCATTTCAG...TTCCCGTGTAAAGCACGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR TCA 90 bp CAGGATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTAATTGCTACTGCCGCTaGAATGGCGATCATGACCAC +
Preference number: 4 (lower is better)
Translates to: QDDATPSTATTSVQKHFRNCYCR*NGDHDH
Trigger: GTGGTCATGATCGCCATTTCAGCGGCAGTAGCAATT...ACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATCCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp CACCACTTCCGTCCAGAAGCACTTCCGTCCCGTGCTTTACACGGGAACTGGGCCATCTGCCCCATGTTTTaGCTTATAGCCACAGAACCT +
Preference number: 4 (lower is better)
Translates to: HHFRPEALPSRALHGNWAICPMF*LIATEP
Trigger: AGGTTCTGTGGCTATAAGTCAAAACATGGGGCAGAT...GGCCCAGTTCCCGTGTAAAGCACGGGACGGAAGTGCTTCTGGACGGAAGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR TCA 90 bp CCGTCCAGAAGCACTTCCGTCCCGTGCTTTACACGGGAACTGGGCCATTCTTTGAGCATCCCCACTAGCTaGATGACAGTAAACTGGGCA +
Preference number: 4 (lower is better)
Translates to: PSRSTSVPCFTRELGHSLSIPTS*MTVNWA
Trigger: TGCCCAGTTTACTGTCATTCAGCTAGTGGGGATGCT...CAAAGAATGGCCCAGTTCCCGTGTAAAGCACGGGACGGAAGTGCTTCTGGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR GCA 90 bp ATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGAGCGGACATTTGGGCTaGATGGCTCACACTGTTTTA +
Preference number: 4 (lower is better)
Translates to: MMLRLPQPPLPSRSTSVPSGHLG*MAHTVL
Trigger: TAAAACAGTGTGAGCCATGCAGCCCAAATGTCCGCT...CGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR GCA 90 bp GATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCCTGACAGGTACTTCATaGCAGATGCTATCCCTCGAA +
Preference number: 4 (lower is better)
Translates to: DDATPSTATTSVQKHFRPLTGTS*QMLSLE
Trigger: TTCGAGGGATAGCATCTGGCATGAAGTACCTGTCAG...GGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CCA 90 bp ATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGGCGATCATGACCACTTaGCTACTTTCACCAGAGATG +
Preference number: 4 (lower is better)
Translates to: MMLRLPQPPLPSRSTSVPAIMTT*LLSPEM
Trigger: CATCTCTGGTGAAAGTAGCCAAGTGGTCATGATCGC...CGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp TCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCACCACATGAAGCATGCCACTaGTGTGAGGGGGAGCGCTCT +
Preference number: 4 (lower is better)
Translates to: SPELLSVCRMMLRLPQPPHEACH*CEGERS
Trigger: AGAGCGCTCCCCCTCACATCAGTGGCATGCTTCATG...TGGTGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp CAGGATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCAGCCCAGCTCCCCTTaGATTGTTTTTGAATCCAGT +
Preference number: 4 (lower is better)
Translates to: QDDATPSTATTSVQKHFRQPSSP*IVFESS
Trigger: ACTGGATTCAAAAACAATTCAAGGGGAGCTGGGCTG...ACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp AGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGTGCTTTACACGGGAACTGGACACCAAGTTACTGTTaGTCAAGATGTTCCGAGCAG +
Preference number: 4 (lower is better)
Translates to: SHHFRPEALPSRALHGNWTPSYC*SRCSEQ
Trigger: CTGCTCGGAACATCTTGATCAACAGTAACTTGGTGT...CCAGTTCCCGTGTAAAGCACGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR GCA 90 bp AGGATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCAGCGGACATTTGGGCTaGATGGCTCACACTGTTTTA +
Preference number: 4 (lower is better)
Translates to: RMMLRLPQPPLPSRSTSVSGHLG*MAHTVL
Trigger: TAAAACAGTGTGAGCCATGCAGCCCAAATGTCCGCT...GACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR GCA 90 bp AGGATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCTGTCCCATAATGCTTaGTTCTCCCAGGAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: RMMLRLPQPPLPSRSTSVLSHNA*FSQEVS
Trigger: AGAGACTTCCTGGGAGAAGCAAGCATTATGGGACAG...GACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CCA 90 bp GATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCACTGCAGTACATCCTTaGAGGATCTTCCTCCTTAGA +
Preference number: 4 (lower is better)
Translates to: DDATPSTATTSVQKHFRPTAVHP*RIFLLR
Trigger: TCTAAGGAGGAAGATCCTCCAAGGATGTACTGCAGT...GGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp GTATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCATGGGGAGCTCAGCTCTaGCACCCCATTAACGGCATC +
Preference number: 4 (lower is better)
Translates to: VSPELLSVCRMMLRLPQPWGAQL*HPINGI
Trigger: GATGCCGTTAATGGGGTGTCAGAGCTGAGCTCCCCA...TGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp CAGGATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTATCTGCCCCATGTTTTaGCTTATAGCCACAGAACCT +
Preference number: 4 (lower is better)
Translates to: QDDATPSTATTSVQKHFRICPMF*LIATEP
Trigger: AGGTTCTGTGGCTATAAGTCAAAACATGGGGCAGAT...ACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp TCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCACCATGTCTGTCTGCAGGATaGTGCTACGCCTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: SPELLSVCRMMLRLPQPPCLSAG*CYAFHS
Trigger: GCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACA...TGGTGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp AGGATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCTGCACCATGTGCATTaGAGTGGAAGACTCTTAAAG +
Preference number: 4 (lower is better)
Translates to: RMMLRLPQPPLPSRSTSVLHHVH*SGRLLK
Trigger: CTTTAAGAGTCTTCCACTTCAATGCACATGGTGCAG...GACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR GCA 90 bp ATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGCATATTACCATCCAATaGCTTGTAGAAACCTGGTCG +
Preference number: 4 (lower is better)
Translates to: MMLRLPQPPLPSRSTSVPHITIQ*LVETWS
Trigger: CGACCAGGTTTCTACAAGGCATTGGATGGTAATATG...CGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR GCA 90 bp ATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGCAAAACTGCACCATGTaGATTGAAGTGGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: MMLRLPQPPLPSRSTSVPQNCTM*IEVEDS
Trigger: AGAGTCTTCCACTTCAATGCACATGGTGCAGTTTTG...CGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR TCA 90 bp TTCCGTCCAGAAGCACTTCCGTCCCGTGCTTTACACGGGAACTGGGCCATTCTTACACCTGCAGTTCATTaGACCATCTTCCTGAGTAGA +
Preference number: 4 (lower is better)
Translates to: FRPEALPSRALHGNWAILTPAVH*TIFLSR
Trigger: TCTACTCAGGAAGATGGTTCAATGAACTGCAGGTGT...AAGAATGGCCCAGTTCCCGTGTAAAGCACGGGACGGAAGTGCTTCTGGACGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR TCA 90 bp CTGTATACAGACACAGGGCTCTGCAAATTGCAATGTCCCAAGCAATATACCTTAAGGGGGAGAATGGCGTaGAGCCAGGAGGCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: LYTDTGLCKLQCPKQYTLRGRMA*SQEAEL
Trigger: AAGCTCCGCCTCCTGGCTTCACGCCATTCTCCCCCT...TAAGGTATATTGCTTGGGACATTGCAATTTGCAGAGCCCTGTGTCTGTATACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR GCA 90 bp CAGGATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCATATTACCATCCAATaGCTTGTAGAAACCTGGTCG +
Preference number: 4 (lower is better)
Translates to: QDDATPSTATTSVQKHFRHITIQ*LVETWS
Trigger: CGACCAGGTTTCTACAAGGCATTGGATGGTAATATG...ACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR GCA 90 bp AGCACTTCCGTCCCGTGCTTTACACGGGAACTGGGCCATTCTTTGATTGCGTTTGTACTTCATGCCAGATaGTATCCCTCGAAGCATCCC +
Preference number: 4 (lower is better)
Translates to: STSVPCFTRELGHSLIAFVLHAR*YPSKHP
Trigger: GGGATGCTTCGAGGGATAGCATCTGGCATGAAGTAC...AAACGCAATCAAAGAATGGCCCAGTTCCCGTGTAAAGCACGGGACGGAAGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CCA 90 bp TCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCACCAGAGCGCTCTGATTGCTaGAGAAGTTACCATGCTCCG +
Preference number: 4 (lower is better)
Translates to: SPELLSVCRMMLRLPQPPERSDC*RSYHAP
Trigger: CGGAGCATGGTAACTTCTCCAGCAATCAGAGCGCTC...TGGTGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR CCA 90 bp AGTATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCGGTACAAGCCATGGATaGAGGGTCTTTGTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: SISRIIVCLQDDATPSTAGTSHG*RVFVCP
Trigger: CGGGCAGACAAAGACCCTCCATCCATGGCTTGTACC...GGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CCA 90 bp AGGATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCAATCTGCTCAAACTTaGGTCTGTTGTTCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: RMMLRLPQPPLPSRSTSVQSAQT*VCCSCL
Trigger: AAGACAGGAACAACAGACCCAAGTTTGAGCAGATTG...GACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CCA 90 bp TCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCACCAGATGATCTTCTTCTGTaGCCCAACCACGGTGACACC +
Preference number: 4 (lower is better)
Translates to: SPELLSVCRMMLRLPQPPDDLLL*PNHGDT
Trigger: GGTGTCACCGTGGTTGGGCCACAGAAGAAGATCATC...TGGTGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp ATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGTCAATCTTTGTAAACTaGTGCTCTCGAAATTTCACC +
Preference number: 4 (lower is better)
Translates to: MMLRLPQPPLPSRSTSVPSIFVN*CSRNFT
Trigger: GGTGAAATTTCGAGAGCATCAGTTTACAAAGATTGA...CGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp ATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCACCAATCGTCAGGACAGGTaGTGGAGCAGCCTGATTAGT +
Preference number: 4 (lower is better)
Translates to: ISRIIVCLQDDATPSTATNRQDR*WSSLIS
Trigger: ACTAATCAGGCTGCTCCATCACCTGTCCTGACGATT...GGTGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp AGGATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCACAGATGAGCACTTGTaGGTTTTGATTTGCGATTGT +
Preference number: 4 (lower is better)
Translates to: RMMLRLPQPPLPSRSTSVTDEHL*VLICDC
Trigger: ACAATCGCAAATCAAAACTCACAAGTGCTCATCTGT...GACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR CCA 90 bp ACCCACACAAACACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCAATGACCTCCACCAGGGACTaGGAGTCCATGGGTACCGTG +
Preference number: 4 (lower is better)
Translates to: THTNTNTVYRHRALQIAMTSTRD*ESMGTV
Trigger: CACGGTACCCATGGACTCCCAGTCCCTGGTGGAGGT...CATTGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGTGTTTGTGTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CCA 90 bp GTTTCTAGAGCTTTAATGCTACTGATGATCTTCTTCTGTGGCCCAACCACGGTGGAGGAAGCGGACATTTaGGCTGCATGGCTCACACTG +
Preference number: 4 (lower is better)
Translates to: VSRALMLLMIFFCGPTTVEEADI*AAWLTL
Trigger: CAGTGTGAGCCATGCAGCCCAAATGTCCGCTTCCTC...CACCGTGGTTGGGCCACAGAAGAAGATCATCAGTAGCATTAAAGCTCTAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CCA 90 bp GCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGTGCTTTACACCTCTTGCCCTCAGAATaGTATAACTTGTTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: AFHSHHFRPEALPSRALHLLPSE*YNLFLV
Trigger: AACAAGAAACAAGTTATACCATTCTGAGGGCAAGAG...GTGTAAAGCACGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CCA 90 bp TCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGTGCTTTACACGGGAGATGGAGAAAGAGTCTaGACTAGTTTCAAACTCAAA +
Preference number: 4 (lower is better)
Translates to: STATTSVQKHFRPVLYTGDGERV*TSFKLK
Trigger: TTTGAGTTTGAAACTAGTCCAGACTCTTTCTCCATC...TCCCGTGTAAAGCACGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CCA 90 bp TTCCGTCCAGAAGCACTTCCGTCCCGTGCTTTACACGGGAACTGGGCCATTCTTGTGTCTTATTGGACTTaGAACTTCCACCAGTATCTC +
Preference number: 4 (lower is better)
Translates to: FRPEALPSRALHGNWAILVSYWT*NFHQYL
Trigger: GAGATACTGGTGGAAGTTCCAAGTCCAATAAGACAC...AAGAATGGCCCAGTTCCCGTGTAAAGCACGGGACGGAAGTGCTTCTGGACGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CCA 90 bp CAGGATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTTTTTTACTCATGCATTaGCCTATAGGCTGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: QDDATPSTATTSVQKHFRFLLMH*PIGCVV
Trigger: GACAACACAGCCTATAGGCCAATGCATGAGTAAAAA...ACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATCCTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR TCA 90 bp TTCCGTCCCGTGCTTTACACGGGAACTGGGCCATTCTTTGATTGCGTTTCTAGACAGCCCAGCTCCCCTTaGATTGTTTTTGAATCCAGT +
Preference number: 4 (lower is better)
Translates to: FRPVLYTGTGPFFDCVSRQPSSP*IVFESS
Trigger: ACTGGATTCAAAAACAATTCAAGGGGAGCTGGGCTG...TCTAGAAACGCAATCAAAGAATGGCCCAGTTCCCGTGTAAAGCACGGGACGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR TCA 90 bp TCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCACCATTTGACTGTGGTCCATaGCATTGCACACCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: SPELLSVCRMMLRLPQPPFDCGP*HCTPGK
Trigger: CTTACCAGGTGTGCAATGTCATGGACCACAGTCAAA...TGGTGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp CCCGTGCTTTACACGGGAACTGGGCCATTCTTTGATTGCGTTTCTAGAGCTTTATCCTTGGCAAACTCATaGACAGCTTGGGTAGGGTCT +
Preference number: 4 (lower is better)
Translates to: PVLYTGTGPFFDCVSRALSLANS*TAWVGS
Trigger: AGACCCTACCCAAGCTGTTCATGAGTTTGCCAAGGA...TAAAGCTCTAGAAACGCAATCAAAGAATGGCCCAGTTCCCGTGTAAAGCACGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR GCA 90 bp AGTATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCACTTCATTGGAAGGCTaGGGAATCAGTTCCCCGAAG +
Preference number: 4 (lower is better)
Translates to: SISRIIVCLQDDATPSTATSLEG*GISSPK
Trigger: CTTCGGGGAACTGATTCCGCAGCCTTCCAATGAAGT...GGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR GCA 90 bp TCCGTCCCGTGCTTTACACGGGAACTGGGCCATTCTTTGATTGCGTTTCTAGAGTGGAGGGTCTTTGTCTaGCCGGAAGTAATTATTCTC +
Preference number: 4 (lower is better)
Translates to: SVPCFTRELGHSLIAFLEWRVFV*PEVIIL
Trigger: GAGAATAATTACTTCCGGGCAGACAAAGACCCTCCA...CTCTAGAAACGCAATCAAAGAATGGCCCAGTTCCCGTGTAAAGCACGGGACGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CCA 90 bp ATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCACCAGGAACACTTGCCAATaGGTACAAGCCATTCGCCTT +
Preference number: 4 (lower is better)
Translates to: ISRIIVCLQDDATPSTATRNTCQ*VQAIRL
Trigger: AAGGCGAATGGCTTGTACCCATTGGCAAGTGTTCCT...GGTGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CCA 90 bp TTCCGTCCCGTGCTTTACACGGGAACTGGGCCATTCTTTGATTGCGTTTCTAGAGCGATCATGACCACTTaGCTACTTTCACCAGAGATG +
Preference number: 4 (lower is better)
Translates to: FRPVLYTGTGPFFDCVSRAIMTT*LLSPEM
Trigger: CATCTCTGGTGAAAGTAGCCAAGTGGTCATGATCGC...TCTAGAAACGCAATCAAAGAATGGCCCAGTTCCCGTGTAAAGCACGGGACGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR TCA 90 bp ATTGAATCACGCAATGAACCTGGAATATCTGAAATGACAGACACTGGAAGTGTGCATGAAGCATGCCACTaGTGTGAGGGGGAGCGCTCT +
Preference number: 4 (lower is better)
Translates to: IESRNEPGISEMTDTGSVHEACH*CEGERS
Trigger: AGAGCGCTCCCCCTCACATCAGTGGCATGCTTCATG...CACACTTCCAGTGTCTGTCATTTCAGATATTCCAGGTTCATTGCGTGATTCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR TCA 90 bp TCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCACCATTGAATCCAGTAGATTaGCTTCATTGGAAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: SPELLSVCRMMLRLPQPPLNPVD*LHWKAA
Trigger: CGCAGCCTTCCAATGAAGTCAATCTACTGGATTCAA...TGGTGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp ATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCACCACACCTGGTAAGTCCTaGTGGGTGTGTAATGTTCAT +
Preference number: 4 (lower is better)
Translates to: ISRIIVCLQDDATPSTATTPGKS*WVCNVH
Trigger: ATGAACATTACACACCCATCAGGACTTACCAGGTGT...GGTGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp CCCGTGCTTTACACGGGAACTGGGCCATTCTTTGATTGCGTTTCTAGAGCTTTATTTGACTGTGGTCCATaGCATTGCACACCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: PVLYTGTGPFFDCVSRALFDCGP*HCTPGK
Trigger: CTTACCAGGTGTGCAATGTCATGGACCACAGTCAAA...TAAAGCTCTAGAAACGCAATCAAAGAATGGCCCAGTTCCCGTGTAAAGCACGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR TCA 90 bp ATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCACCACTTCCGTCTCCCCAAGATCCATTTaGGTGAAACTTTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: IIVCLQDDATPSTATTSVSPRSI*VKLSSA
Trigger: AGCTGATGAAAGTTTCACTCAAATGGATCTTGGGGA...GACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp AGCACTTCCGTCCCGTGCTTTACACGGGAACTGGGCCATTCTTTGATTGCGTTTCCAGTCCAGGATAACTaGGGTCTCGTTTATATTAGA +
Preference number: 4 (lower is better)
Translates to: STSVPCFTRELGHSLIAFPVQDN*GLVYIR
Trigger: TCTAATATAAACGAGACCTCAGTTATCCTGGACTGG...AAACGCAATCAAAGAATGGCCCAGTTCCCGTGTAAAGCACGGGACGGAAGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR TCA 90 bp ACTGGGCCATTCTTTGATTGCGTTTCTAGAGCTTTAATGCTACTGATGATCTTCTGGGGAGCTCAGCTCTaGCACCCCATTAACGGCATC +
Preference number: 4 (lower is better)
Translates to: TGPFFDCVSRALMLLMIFWGAQL*HPINGI
Trigger: GATGCCGTTAATGGGGTGTCAGAGCTGAGCTCCCCA...GAAGATCATCAGTAGCATTAAAGCTCTAGAAACGCAATCAAAGAATGGCCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR TCA 90 bp AGAGCTTTAATGCTACTGATGATCTTCTTCTGTGGCCCAACCACGGTGACACCACTCCTTCCAGTCGAATaGTATTGGGGTGGTCAAACT +
Preference number: 4 (lower is better)
Translates to: RALMLLMIFFCGPTTVTPLLPVE*YWGGQT
Trigger: AGTTTGACCACCCCAATATCATTCGACTGGAAGGAG...TGGTGTCACCGTGGTTGGGCCACAGAAGAAGATCATCAGTAGCATTAAAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR TCA 90 bp TGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTGCAGTCCAGCATCAGCTaGTACAAGGCAGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: CLIGLGTSTSISRIIVCLQSSIS*YKAAGQ
Trigger: CTGCCCAGCTGCCTTGTATCAGCTGATGCTGGACTG...CAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR GCA 90 bp GTATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCACTGTCCCATAATGCTTaGTTCTCCCAGGAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: VSPELLSVCRMMLRLPQPLSHNA*FSQEVS
Trigger: AGAGACTTCCTGGGAGAAGCAAGCATTATGGGACAG...TGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR GCA 90 bp GAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTAGCACTTCCGTCCCGTaGTTTACACGGGAACTGGGC +
Preference number: 4 (lower is better)
Translates to: ECLIGLGTSTSISRIIVCSTSVP*FTRELG
Trigger: GCCCAGTTCCCGTGTAAAGCACGGGACGGAAGTGCT...ACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CCA 90 bp GTCCCGTGCTTTACACGGGAACTGGGCCATTCTTTGATTGCGTTTCTAGAGCTTACTGCAGTACATCCTTaGAGGATCTTCCTCCTTAGA +
Preference number: 4 (lower is better)
Translates to: VPCFTRELGHSLIAFLELTAVHP*RIFLLR
Trigger: TCTAAGGAGGAAGATCCTCCAAGGATGTACTGCAGT...AAGCTCTAGAAACGCAATCAAAGAATGGCCCAGTTCCCGTGTAAAGCACGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR TCA 90 bp ACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCAATGTCCCAAGCAATATCACCGTGGTGTTGGTaGGTCCAAACTGTCGAGGGA +
Preference number: 4 (lower is better)
Translates to: TNTVYRHRALQIAMSQAISPWCW*VQTVEG
Trigger: TCCCTCGACAGTTTGGACTCACCAACACCACGGTGA...TATTGCTTGGGACATTGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR TCA 90 bp AGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTCACCGTGGTGTTGGTaGGTCCAAACTGTCGAGGGA +
Preference number: 4 (lower is better)
Translates to: SVLLDLELPPVSPELLSVSPWCW*VQTVEG
Trigger: TCCCTCGACAGTTTGGACTCACCAACACCACGGTGA...GACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp TTCATTGAATCACGCAATGAACCTGGAATATCTGAAATGACAGACACTGGAAGTTGGGGAGCTCAGCTCTaGCACCCCATTAACGGCATC +
Preference number: 4 (lower is better)
Translates to: FIESRNEPGISEMTDTGSWGAQL*HPINGI
Trigger: GATGCCGTTAATGGGGTGTCAGAGCTGAGCTCCCCA...ACTTCCAGTGTCTGTCATTTCAGATATTCCAGGTTCATTGCGTGATTCAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR TCA 90 bp ACCCACACAAACACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCAATGGGTGATGGAGCAGCCTaGTTAGTTGTGATGCTGACC +
Preference number: 4 (lower is better)
Translates to: THTNTNTVYRHRALQIAMGDGAA*LVVMLT
Trigger: GGTCAGCATCACAACTAATCAGGCTGCTCCATCACC...CATTGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGTGTTTGTGTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR TCA 90 bp GGAACTGGGCCATTCTTTGATTGCGTTTCTAGAGCTTTAATGCTACTGATGATCGGTGATGGAGCAGCCTaGTTAGTTGTGATGCTGACC +
Preference number: 4 (lower is better)
Translates to: GTGPFFDCVSRALMLLMIGDGAA*LVVMLT
Trigger: GGTCAGCATCACAACTAATCAGGCTGCTCCATCACC...GATCATCAGTAGCATTAAAGCTCTAGAAACGCAATCAAAGAATGGCCCAGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR TCA 90 bp ATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCACCACTTCCGTCGGTCAACATAAGTCCTaGGACCTGGAAGTTTTAAAT +
Preference number: 4 (lower is better)
Translates to: IIVCLQDDATPSTATTSVGQHKS*DLEVLN
Trigger: ATTTAAAACTTCCAGGTCTCAGGACTTATGTTGACC...GACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp AGCACTTCCGTCCCGTGCTTTACACGGGAACTGGGCCATTCTTTGATTGCGTTTGGTCAACATAAGTCCTaGGACCTGGAAGTTTTAAAT +
Preference number: 4 (lower is better)
Translates to: STSVPCFTRELGHSLIAFGQHKS*DLEVLN
Trigger: ATTTAAAACTTCCAGGTCTCAGGACTTATGTTGACC...AAACGCAATCAAAGAATGGCCCAGTTCCCGTGTAAAGCACGGGACGGAAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR TCA 90 bp TGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTGGTCCAGAAGAAGGTTTaGTGGCCTTGCGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: CLIGLGTSTSISRIIVCLVQKKV*WPCGCT
Trigger: AGTGCAGCCGCAAGGCCATCAAACCTTCTTCTGGAC...CAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR GCA 90 bp AATCCTTCTAAGTTACACACCAAAACTGCACCATGTGCATTGAAGTGGAAGACTCTGGAGAAGTTACCATaGTCCGCTCGCAGGCTGATG +
Preference number: 4 (lower is better)
Translates to: NPSKLHTKTAPCALKWKTLEKLP*SARRLM
Trigger: CATCAGCCTGCGAGCGGAGCATGGTAACTTCTCCAG...AGTCTTCCACTTCAATGCACATGGTGCAGTTTTGGTGTGTAACTTAGAAGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR GCA 90 bp GTATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCATGGAGGGTCTTTGTCTaGCCGGAAGTAATTATTCTC +
Preference number: 4 (lower is better)
Translates to: VSPELLSVCRMMLRLPQPWRVFV*PEVIIL
Trigger: GAGAATAATTACTTCCGGGCAGACAAAGACCCTCCA...TGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR GCA 90 bp GTATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCAGATTTCCTTGCAGTGTaGTGTCCAGACACCATTAAG +
Preference number: 4 (lower is better)
Translates to: VSPELLSVCRMMLRLPQPDFLAV*CPDTIK
Trigger: CTTAATGGTGTCTGGACAGCACACTGCAAGGAAATC...TGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR GCA 90 bp TACTCATATTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAAAGCACTTCCGTCCCGTaGTTTACACGGGAACTGGGC +
Preference number: 4 (lower is better)
Translates to: YSYLSVLLDLELPPVSPESTSVP*FTRELG
Trigger: GCCCAGTTCCCGTGTAAAGCACGGGACGGAAGTGCT...TTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATATGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CCA 90 bp CTGTATACAGACACAGGGCTCTGCAAATTGCAATGTCCCAAGCAATATACCTTAGTCGGGTACAAGCCATaGATGGAGGGTCTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: LYTDTGLCKLQCPKQYTLVGYKP*MEGLCL
Trigger: CAGACAAAGACCCTCCATCCATGGCTTGTACCCGAC...TAAGGTATATTGCTTGGGACATTGCAATTTGCAGAGCCCTGTGTCTGTATACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CCA 90 bp AGCACTTCCGTCCCGTGCTTTACACGGGAACTGGGCCATTCTTTGATTGCGTTTGTCTTCATATGTATGTaGGTCAACATAAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: STSVPCFTRELGHSLIAFVFICM*VNISPE
Trigger: CTCAGGACTTATGTTGACCCACATACATATGAAGAC...AAACGCAATCAAAGAATGGCCCAGTTCCCGTGTAAAGCACGGGACGGAAGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
3UTR CAA 72 bp TTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATaGTCTGTCTGCAGGATGATGCTACGCCTTCCACAG +
Preference number: 4 (lower is better)
Translates to: LDLELPPVSPEL*SVCRMMLRLPQ
Trigger: CTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp TTAATGCTACTGATGATCTTCTTCTGTGGCCCAACCACGGTGACACCAACCTTTTTGAATCCAGTAGATTaGCTTCATTGGAAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: LMLLMIFFCGPTTVTPTFLNPVD*LHWKAA
Trigger: CGCAGCCTTCCAATGAAGTCAATCTACTGGATTCAA...AAAGGTTGGTGTCACCGTGGTTGGGCCACAGAAGAAGATCATCAGTAGCATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR TCA 90 bp AGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCGTTCATCCACACCACTaGTCTCTTCCCACCCATGTG +
Preference number: 4 (lower is better)
Translates to: SVLLDLELPPVSPELLSVVHPHH*SLPTHV
Trigger: CACATGGGTGGGAAGAGATCAGTGGTGTGGATGAAC...GACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp GACACAGGGCTCTGCAAATTGCAATGTCCCAAGCAATATACCTTAAATGTATCAGTTCATCCACACCACTaGTCTCTTCCCACCCATGTG +
Preference number: 4 (lower is better)
Translates to: DTGLCKLQCPKQYTLNVSVHPHH*SLPTHV
Trigger: CACATGGGTGGGAAGAGATCAGTGGTGTGGATGAAC...TGATACATTTAAGGTATATTGCTTGGGACATTGCAATTTGCAGAGCCCTGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR TCA 90 bp TTAATGCTACTGATGATCTTCTTCTGTGGCCCAACCACGGTGACACCAACCTTTACACCTGGTAAGTCCTaGTGGGTGTGTAATGTTCAT +
Preference number: 4 (lower is better)
Translates to: LMLLMIFFCGPTTVTPTFTPGKS*WVCNVH
Trigger: ATGAACATTACACACCCATCAGGACTTACCAGGTGT...AAAGGTTGGTGTCACCGTGGTTGGGCCACAGAAGAAGATCATCAGTAGCATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR TCA 90 bp GTATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCACCAGTCCAGGATAACTaGGGTCTCGTTTATATTAGA +
Preference number: 4 (lower is better)
Translates to: VSPELLSVCRMMLRLPQPPVQDN*GLVYIR
Trigger: TCTAATATAAACGAGACCTCAGTTATCCTGGACTGG...TGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp TACTCATATTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAACTGGTGATGTCCACCTaGTTGGGATCTTCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: YSYLSVLLDLELPPVSPELVMST*LGSSLL
Trigger: GAGGAGGGAAGATCCCAATCAGGTGGACATCACCAG...TTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATATGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR GCA 90 bp TGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTGGGGGAGCGCTCTGATTaGTGGAGAAGTTACCATGCT +
Preference number: 4 (lower is better)
Translates to: CLIGLGTSTSISRIIVCLGERSD*WRSYHA
Trigger: AGCATGGTAACTTCTCCAGCAATCAGAGCGCTCCCC...CAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR GCA 90 bp AGTATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCTTTCAAACTCAAACTTaGGGCTGTTCGTCCCATATC +
Preference number: 4 (lower is better)
Translates to: SISRIIVCLQDDATPSTAFQTQT*GCSSHI
Trigger: GATATGGGACGAACAGCCGCAAGTTTGAGTTTGAAA...GGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR GCA 90 bp TCCGTCCCGTGCTTTACACGGGAACTGGGCCATTCTTTGATTGCGTTTCTAGAGCTCTCCAAATTCACCTaGTCCAACAACTTTATCAAT +
Preference number: 4 (lower is better)
Translates to: SVPCFTRELGHSLIAFLELSKFT*SNNFIN
Trigger: ATTGATAAAGTTGTTGGAGCAGGTGAATTTGGAGAG...CTCTAGAAACGCAATCAAAGAATGGCCCAGTTCCCGTGTAAAGCACGGGACGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR GCA 90 bp GTATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCAGTTACACACCAAAACTaGACCATGTGCATTGAAGTG +
Preference number: 4 (lower is better)
Translates to: VSPELLSVCRMMLRLPQPVTHQN*TMCIEV
Trigger: CACTTCAATGCACATGGTGCAGTTTTGGTGTGTAAC...TGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR GCA 90 bp ACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCAATGTCCCAAGCAATACGATCAGACATCTTTTaGAAGATCCCTGCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: TNTVYRHRALQIAMSQAIRSDIF*KIPAPS
Trigger: GGAGGGGGCAGGGATCTTGCAAAAGATGTCTGATCG...TATTGCTTGGGACATTGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CCA 90 bp GGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTGCAGGATGATTGCCTTGTAGAAACCTaGTCGACAAGCTTGGCACAT +
Preference number: 4 (lower is better)
Translates to: GLGTSTSISRIIVCLQDDCLVET*STSLAH
Trigger: ATGTGCCAAGCTTGTCGACCAGGTTTCTACAAGGCA...ATCATCCTGCAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CCA 90 bp TTCATTGAATCACGCAATGAACCTGGAATATCTGAAATGACAGACACTGGAAGTGGTACAAGCCATGGATaGAGGGTCTTTGTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: FIESRNEPGISEMTDTGSGTSHG*RVFVCP
Trigger: CGGGCAGACAAAGACCCTCCATCCATGGCTTGTACC...ACTTCCAGTGTCTGTCATTTCAGATATTCCAGGTTCATTGCGTGATTCAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CCA 90 bp TACTCATATTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAAGAGGAAGCGGACATTTaGGCTGCATGGCTCACACTG +
Preference number: 4 (lower is better)
Translates to: YSYLSVLLDLELPPVSPEEEADI*AAWLTL
Trigger: CAGTGTGAGCCATGCAGCCCAAATGTCCGCTTCCTC...TTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATATGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CCA 90 bp TTCATTGAATCACGCAATGAACCTGGAATATCTGAAATGACAGACACTGGAAGTGAGGAAGCGGACATTTaGGCTGCATGGCTCACACTG +
Preference number: 4 (lower is better)
Translates to: FIESRNEPGISEMTDTGSEEADI*AAWLTL
Trigger: CAGTGTGAGCCATGCAGCCCAAATGTCCGCTTCCTC...ACTTCCAGTGTCTGTCATTTCAGATATTCCAGGTTCATTGCGTGATTCAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CCA 90 bp AGAGCTTTAATGCTACTGATGATCTTCTTCTGTGGCCCAACCACGGTGACACCAGTTCGGGCTCGGATTTaGAATACGTATATAGTGTCA +
Preference number: 4 (lower is better)
Translates to: RALMLLMIFFCGPTTVTPVRARI*NTYIVS
Trigger: TGACACTATATACGTATTCCAAATCCGAGCCCGAAC...TGGTGTCACCGTGGTTGGGCCACAGAAGAAGATCATCAGTAGCATTAAAGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CCA 90 bp GTCCCGTGCTTTACACGGGAACTGGGCCATTCTTTGATTGCGTTTCTAGAGCTTTATCAATGGATATGTTaGTGGCATCCAATTCCTTGG +
Preference number: 4 (lower is better)
Translates to: VPCFTRELGHSLIAFLELYQWIC*WHPIPW
Trigger: CCAAGGAATTGGATGCCACCAACATATCCATTGATA...AAGCTCTAGAAACGCAATCAAAGAATGGCCCAGTTCCCGTGTAAAGCACGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CCA 90 bp AGTATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCCAATCTGCTCAAACTTaGGTCTGTTGTTCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: SISRIIVCLQDDATPSTAQSAQT*VCCSCL
Trigger: AAGACAGGAACAACAGACCCAAGTTTGAGCAGATTG...GGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CCA 90 bp GAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTGATGATCTTCTTCTGTaGCCCAACCACGGTGACACC +
Preference number: 4 (lower is better)
Translates to: ECLIGLGTSTSISRIIVCDDLLL*PNHGDT
Trigger: GGTGTCACCGTGGTTGGGCCACAGAAGAAGATCATC...ACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp TTCATTGAATCACGCAATGAACCTGGAATATCTGAAATGACAGACACTGGAAGTAGGAGGATGGAGAGCTaGCAATCCATGTTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: FIESRNEPGISEMTDTGSRRMES*QSMLLV
Trigger: CACCAGCAACATGGATTGTCAGCTCTCCATCCTCCT...ACTTCCAGTGTCTGTCATTTCAGATATTCCAGGTTCATTGCGTGATTCAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR TCA 90 bp TTCATTGAATCACGCAATGAACCTGGAATATCTGAAATGACAGACACTGGAAGTCTCTTCCCACCCATGTaGTGGATAAGAGATCCAGCC +
Preference number: 4 (lower is better)
Translates to: FIESRNEPGISEMTDTGSLFPPM*WIRDPA
Trigger: GGCTGGATCTCTTATCCATCACATGGGTGGGAAGAG...ACTTCCAGTGTCTGTCATTTCAGATATTCCAGGTTCATTGCGTGATTCAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR TCA 90 bp CTGTATACAGACACAGGGCTCTGCAAATTGCAATGTCCCAAGCAATATACCTTATTTGACTGTGGTCCATaGCATTGCACACCTGGTAAG +
Preference number: 4 (lower is better)
Translates to: LYTDTGLCKLQCPKQYTLFDCGP*HCTPGK
Trigger: CTTACCAGGTGTGCAATGTCATGGACCACAGTCAAA...TAAGGTATATTGCTTGGGACATTGCAATTTGCAGAGCCCTGTGTCTGTATACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR TCA 90 bp TACACCCACACAAACACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCAATAAATCTTCTGAGCTaGGTTCCTGGGGACCCAGTT +
Preference number: 4 (lower is better)
Translates to: YTHTNTNTVYRHRALQIAINLLS*VPGDPV
Trigger: AACTGGGTCCCCAGGAACTCAGCTCAGAAGATTTAT...TGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGTGTTTGTGTGGGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR TCA 90 bp AGTATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCCAAGATCCATTTGAGTaGAACTTTCATCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: SISRIIVCLQDDATPSTAQDPFE*NFHQLQ
Trigger: TTGCAGCTGATGAAAGTTTCACTCAAATGGATCTTG...GGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp GTTTCTAGAGCTTTAATGCTACTGATGATCTTCTTCTGTGGCCCAACCACGGTGTCCCCAAGATCCATTTaGGTGAAACTTTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: VSRALMLLMIFFCGPTTVSPRSI*VKLSSA
Trigger: AGCTGATGAAAGTTTCACTCAAATGGATCTTGGGGA...CACCGTGGTTGGGCCACAGAAGAAGATCATCAGTAGCATTAAAGCTCTAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR TCA 90 bp AATCCTTCTAAGTTACACACCAAAACTGCACCATGTGCATTGAAGTGGAAGACTTCCTTGGCAAACTCATaGACAGCTTGGGTAGGGTCT +
Preference number: 4 (lower is better)
Translates to: NPSKLHTKTAPCALKWKTSLANS*TAWVGS
Trigger: AGACCCTACCCAAGCTGTTCATGAGTTTGCCAAGGA...AGTCTTCCACTTCAATGCACATGGTGCAGTTTTGGTGTGTAACTTAGAAGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR TCA 90 bp GGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTGCAGGATGATACACCAAGTTACTGTTaGTCAAGATGTTCCGAGCAG +
Preference number: 4 (lower is better)
Translates to: GLGTSTSISRIIVCLQDDTPSYC*SRCSEQ
Trigger: CTGCTCGGAACATCTTGATCAACAGTAACTTGGTGT...ATCATCCTGCAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp GTATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCAGCTTTAATTACATCCTaGTTGGACATCTCCCAGTAT +
Preference number: 4 (lower is better)
Translates to: VSPELLSVCRMMLRLPQPALITS*LDISQY
Trigger: ATACTGGGAGATGTCCAATCAGGATGTAATTAAAGC...TGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp AGTATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCTATGGCCAGATAGTTTaGGGTATAAATTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: SISRIIVCLQDDATPSTAYGQIV*GINSSV
Trigger: CACAGAGGAATTTATACCTCAAACTATCTGGCCATA...GGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR TCA 90 bp GTATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCAAGCACTTGTGAGTTTTaGTTTGCGATTGTAAGCTGT +
Preference number: 4 (lower is better)
Translates to: VSPELLSVCRMMLRLPQPSTCEF*FAIVSC
Trigger: ACAGCTTACAATCGCAAATCAAAACTCACAAGTGCT...TGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR GCA 90 bp ACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCAATGTCCCAAGCAATAACTTCATTGGAAGGCTaGGGAATCAGTTCCCCGAAG +
Preference number: 4 (lower is better)
Translates to: TNTVYRHRALQIAMSQAITSLEG*GISSPK
Trigger: CTTCGGGGAACTGATTCCGCAGCCTTCCAATGAAGT...TATTGCTTGGGACATTGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR GCA 90 bp ACCCACACAAACACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCAATGGCCAGGACAAAGAGATaGTATTTCTGGAGGTCCGAT +
Preference number: 4 (lower is better)
Translates to: THTNTNTVYRHRALQIAMARTKR*YFWRSD
Trigger: ATCGGACCTCCAGAAATAGCATCTCTTTGTCCTGGC...CATTGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGTGTTTGTGTGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR GCA 90 bp GTATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCAGGGCCATTCTTTGATTaGGTTTCTAGAGCTTTAATG +
Preference number: 4 (lower is better)
Translates to: VSPELLSVCRMMLRLPQPGPFFD*VSRALM
Trigger: CATTAAAGCTCTAGAAACGCAATCAAAGAATGGCCC...TGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CCA 90 bp GTGCTTTACACGGGAACTGGGCCATTCTTTGATTGCGTTTCTAGAGCTTTAATGCATGGGTACCGTGTCTaGAAACATAGCCAGATTCTT +
Preference number: 4 (lower is better)
Translates to: VLYTGTGPFFDCVSRALMHGYRV*KHSQIL
Trigger: AAGAATCTGGCTATGTTTCCAGACACGGTACCCATG...CATTAAAGCTCTAGAAACGCAATCAAAGAATGGCCCAGTTCCCGTGTAAAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CCA 90 bp ACCCACACAAACACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCAATGTGCCTTGTAGAAACCTaGTCGACAAGCTTGGCACAT +
Preference number: 4 (lower is better)
Translates to: THTNTNTVYRHRALQIAMCLVET*STSLAH
Trigger: ATGTGCCAAGCTTGTCGACCAGGTTTCTACAAGGCA...CATTGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGTGTTTGTGTGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CCA 90 bp TTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCGTCGGGTACAAGCCATaGATGGAGGGTCTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: FECLIGLGTSTSISRIIVVGYKP*MEGLCL
Trigger: CAGACAAAGACCCTCCATCCATGGCTTGTACCCGAC...GACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CCA 90 bp AGAGCTTTAATGCTACTGATGATCTTCTTCTGTGGCCCAACCACGGTGACACCAGACATTTGGGCTGCATaGCTCACACTGTTTTATATT +
Preference number: 4 (lower is better)
Translates to: RALMLLMIFFCGPTTVTPDIWAA*LTLFYI
Trigger: AATATAAAACAGTGTGAGCCATGCAGCCCAAATGTC...TGGTGTCACCGTGGTTGGGCCACAGAAGAAGATCATCAGTAGCATTAAAGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CCA 90 bp AGTATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCGTCTTCATATGTATGTaGGTCAACATAAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: SISRIIVCLQDDATPSTAVFICM*VNISPE
Trigger: CTCAGGACTTATGTTGACCCACATACATATGAAGAC...GGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATACT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CCA 90 bp TCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCACCAAGTACCTCTACTCCATaGTTAAGAATCGTACACTTA +
Preference number: 4 (lower is better)
Translates to: SPELLSVCRMMLRLPQPPSTSTP*LRIVHL
Trigger: TAAGTGTACGATTCTTAACCATGGAGTAGAGGTACT...TGGTGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR TCA 90 bp ATTGAATCACGCAATGAACCTGGAATATCTGAAATGACAGACACTGGAAGTGTGCAGCCCAGCTCCCCTTaGATTGTTTTTGAATCCAGT +
Preference number: 4 (lower is better)
Translates to: IESRNEPGISEMTDTGSVQPSSP*IVFESS
Trigger: ACTGGATTCAAAAACAATTCAAGGGGAGCTGGGCTG...CACACTTCCAGTGTCTGTCATTTCAGATATTCCAGGTTCATTGCGTGATTCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR TCA 90 bp TTCATTGAATCACGCAATGAACCTGGAATATCTGAAATGACAGACACTGGAAGTAATCGTCAGGACAGGTaGTGGAGCAGCCTGATTAGT +
Preference number: 4 (lower is better)
Translates to: FIESRNEPGISEMTDTGSNRQDR*WSSLIS
Trigger: ACTAATCAGGCTGCTCCATCACCTGTCCTGACGATT...ACTTCCAGTGTCTGTCATTTCAGATATTCCAGGTTCATTGCGTGATTCAATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR TCA 90 bp AGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCCTGAAATGGCGATCATaGCCACTTGGCTACTTTCAC +
Preference number: 4 (lower is better)
Translates to: SVLLDLELPPVSPELLSVLKWRS*PLGYFH
Trigger: GTGAAAGTAGCCAAGTGGTCATGATCGCCATTTCAG...GACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp AATCCTTCTAAGTTACACACCAAAACTGCACCATGTGCATTGAAGTGGAAGACTCTCCTTCCAGTCGAATaGTATTGGGGTGGTCAAACT +
Preference number: 4 (lower is better)
Translates to: NPSKLHTKTAPCALKWKTLLPVE*YWGGQT
Trigger: AGTTTGACCACCCCAATATCATTCGACTGGAAGGAG...AGTCTTCCACTTCAATGCACATGGTGCAGTTTTGGTGTGTAACTTAGAAGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR TCA 90 bp TACTCATATTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAAAGCATCCCCACTAGCTaGATGACAGTAAACTGGGCA +
Preference number: 4 (lower is better)
Translates to: YSYLSVLLDLELPPVSPESIPTS*MTVNWA
Trigger: TGCCCAGTTTACTGTCATTCAGCTAGTGGGGATGCT...TTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATATGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR GCA 90 bp TACTCATATTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAAACTTCATTGGAAGGCTaGGGAATCAGTTCCCCGAAG +
Preference number: 4 (lower is better)
Translates to: YSYLSVLLDLELPPVSPETSLEG*GISSPK
Trigger: CTTCGGGGAACTGATTCCGCAGCCTTCCAATGAAGT...TTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATATGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR GCA 90 bp CCCGTGCTTTACACGGGAACTGGGCCATTCTTTGATTGCGTTTCTAGAGCTTTAGAAACTTTCATCAGCTaGAATGGTGTCAATCTTTGT +
Preference number: 4 (lower is better)
Translates to: PVLYTGTGPFFDCVSRALETFIS*NGVNLC
Trigger: ACAAAGATTGACACCATTGCAGCTGATGAAAGTTTC...TAAAGCTCTAGAAACGCAATCAAAGAATGGCCCAGTTCCCGTGTAAAGCACGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR GCA 90 bp ACCCACACAAACACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCAATGTGGAGGGTCTTTGTCTaGCCGGAAGTAATTATTCTC +
Preference number: 4 (lower is better)
Translates to: THTNTNTVYRHRALQIAMWRVFV*PEVIIL
Trigger: GAGAATAATTACTTCCGGGCAGACAAAGACCCTCCA...CATTGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGTGTTTGTGTGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR GCA 90 bp ATTGAATCACGCAATGAACCTGGAATATCTGAAATGACAGACACTGGAAGTGTGAGCGGACATTTGGGCTaGATGGCTCACACTGTTTTA +
Preference number: 4 (lower is better)
Translates to: IESRNEPGISEMTDTGSVSGHLG*MAHTVL
Trigger: TAAAACAGTGTGAGCCATGCAGCCCAAATGTCCGCT...CACACTTCCAGTGTCTGTCATTTCAGATATTCCAGGTTCATTGCGTGATTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR GCA 90 bp AAACACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCAATGTCCCAAGCGGTGTAGTTAGTATGTaGCAGAAGGTCTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: KHKYCIQTQGSANCNVPSGVVSM*QKVCHC
Trigger: ACAGTGACAGACCTTCTGGCACATACTAACTACACC...GCTTGGGACATTGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CCA 90 bp ACCCACACAAACACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCAATGCATGGGTACCGTGTCTaGAAACATAGCCAGATTCTT +
Preference number: 4 (lower is better)
Translates to: THTNTNTVYRHRALQIAMHGYRV*KHSQIL
Trigger: AAGAATCTGGCTATGTTTCCAGACACGGTACCCATG...CATTGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGTGTTTGTGTGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CCA 90 bp ACCCACACAAACACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCAATGACTGCAGTACATCCTTaGAGGATCTTCCTCCTTAGA +
Preference number: 4 (lower is better)
Translates to: THTNTNTVYRHRALQIAMTAVHP*RIFLLR
Trigger: TCTAAGGAGGAAGATCCTCCAAGGATGTACTGCAGT...CATTGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGTGTTTGTGTGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CCA 90 bp ACTGGGCCATTCTTTGATTGCGTTTCTAGAGCTTTAATGCTACTGATGATCTTCTGCCTTGTAGAAACCTaGTCGACAAGCTTGGCACAT +
Preference number: 4 (lower is better)
Translates to: TGPFFDCVSRALMLLMIFCLVET*STSLAH
Trigger: ATGTGCCAAGCTTGTCGACCAGGTTTCTACAAGGCA...GAAGATCATCAGTAGCATTAAAGCTCTAGAAACGCAATCAAAGAATGGCCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CCA 90 bp TCATATTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTAGTCGGGTACAAGCCATaGATGGAGGGTCTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: SYLSVLLDLELPPVSPELVGYKP*MEGLCL
Trigger: CAGACAAAGACCCTCCATCCATGGCTTGTACCCGAC...TAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CCA 90 bp GTGCTTTACACGGGAACTGGGCCATTCTTTGATTGCGTTTCTAGAGCTTTAATGCAATGGATATGTTGGTaGCATCCAATTCCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: VLYTGTGPFFDCVSRALMQWICW*HPIPWQ
Trigger: TTGCCAAGGAATTGGATGCCACCAACATATCCATTG...CATTAAAGCTCTAGAAACGCAATCAAAGAATGGCCCAGTTCCCGTGTAAAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CCA 90 bp TACTCATATTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATCCACTTCTCTCCAGTaGAGCTATTCTCGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: YSYLSVLLDLELPPVSPESTSLQ*SYSRKL
Trigger: GAGCTTCCGAGAATAGCTCCACTGGAGAGAAGTGGA...TTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATATGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR TCA 90 bp ATTGAATCACGCAATGAACCTGGAATATCTGAAATGACAGACACTGGAAGTGTGTTGAATCCAGTAGATTaGCTTCATTGGAAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: IESRNEPGISEMTDTGSVLNPVD*LHWKAA
Trigger: CGCAGCCTTCCAATGAAGTCAATCTACTGGATTCAA...CACACTTCCAGTGTCTGTCATTTCAGATATTCCAGGTTCATTGCGTGATTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR TCA 90 bp GACACAGGGCTCTGCAAATTGCAATGTCCCAAGCAATATACCTTAAATGTATCAACACCTGGTAAGTCCTaGTGGGTGTGTAATGTTCAT +
Preference number: 4 (lower is better)
Translates to: DTGLCKLQCPKQYTLNVSTPGKS*WVCNVH
Trigger: ATGAACATTACACACCCATCAGGACTTACCAGGTGT...TGATACATTTAAGGTATATTGCTTGGGACATTGCAATTTGCAGAGCCCTGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR TCA 90 bp TTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCATAAATCTTCTGAGCTaGGTTCCTGGGGACCCAGTT +
Preference number: 4 (lower is better)
Translates to: FECLIGLGTSTSISRIIVINLLS*VPGDPV
Trigger: AACTGGGTCCCCAGGAACTCAGCTCAGAAGATTTAT...GACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp TTAATGCTACTGATGATCTTCTTCTGTGGCCCAACCACGGTGACACCAACCTTTTCAATCTTTGTAAACTaGTGCTCTCGAAATTTCACC +
Preference number: 4 (lower is better)
Translates to: LMLLMIFFCGPTTVTPTFSIFVN*CSRNFT
Trigger: GGTGAAATTTCGAGAGCATCAGTTTACAAAGATTGA...AAAGGTTGGTGTCACCGTGGTTGGGCCACAGAAGAAGATCATCAGTAGCATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR TCA 90 bp CTGTATACAGACACAGGGCTCTGCAAATTGCAATGTCCCAAGCAATATACCTTATCCCCAAGATCCATTTaGGTGAAACTTTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: LYTDTGLCKLQCPKQYTLSPRSI*VKLSSA
Trigger: AGCTGATGAAAGTTTCACTCAAATGGATCTTGGGGA...TAAGGTATATTGCTTGGGACATTGCAATTTGCAGAGCCCTGTGTCTGTATACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR TCA 90 bp TCATATTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATGTACTCCACACCCGTaGAGATTTCCTTGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SYLSVLLDLELPPVSPELCTPHP*RFPCSV
Trigger: CACACTGCAAGGAAATCTTCACGGGTGTGGAGTACA...TAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR GCA 90 bp ACCCACACAAACACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCAATGCATATTACCATCCAATaGCTTGTAGAAACCTGGTCG +
Preference number: 4 (lower is better)
Translates to: THTNTNTVYRHRALQIAMHITIQ*LVETWS
Trigger: CGACCAGGTTTCTACAAGGCATTGGATGGTAATATG...CATTGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGTGTTTGTGTGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR GCA 90 bp TGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTGGGTGTAGTTAGTATGTaGCAGAAGGTCTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: CLIGLGTSTSISRIIVCLGVVSM*QKVCHC
Trigger: ACAGTGACAGACCTTCTGGCACATACTAACTACACC...CAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR GCA 90 bp TACTCATATTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAAGCCAGGACAAAGAGATaGTATTTCTGGAGGTCCGAT +
Preference number: 4 (lower is better)
Translates to: YSYLSVLLDLELPPVSPEARTKR*YFWRSD
Trigger: ATCGGACCTCCAGAAATAGCATCTCTTTGTCCTGGC...TTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATATGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR GCA 90 bp TTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCGCCAGGACAAAGAGATaGTATTTCTGGAGGTCCGAT +
Preference number: 4 (lower is better)
Translates to: FECLIGLGTSTSISRIIVARTKR*YFWRSD
Trigger: ATCGGACCTCCAGAAATAGCATCTCTTTGTCCTGGC...GACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CCA 90 bp TTCATTGAATCACGCAATGAACCTGGAATATCTGAAATGACAGACACTGGAAGTAGGAACACTTGCCAATaGGTACAAGCCATTCGCCTT +
Preference number: 4 (lower is better)
Translates to: FIESRNEPGISEMTDTGSRNTCQ*VQAIRL
Trigger: AAGGCGAATGGCTTGTACCCATTGGCAAGTGTTCCT...ACTTCCAGTGTCTGTCATTTCAGATATTCCAGGTTCATTGCGTGATTCAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CCA 90 bp TGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTGCCTGGTCGACAAGCTTaGCACATAAAACCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: CLIGLGTSTSISRIIVCLPGRQA*HIKPLS
Trigger: AGAAAGAGGTTTTATGTGCCAAGCTTGTCGACCAGG...CAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp TTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCACACCTGCAGTTCATTaGACCATCTTCCTGAGTAGA +
Preference number: 4 (lower is better)
Translates to: FECLIGLGTSTSISRIIVTPAVH*TIFLSR
Trigger: TCTACTCAGGAAGATGGTTCAATGAACTGCAGGTGT...GACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp TTCATTGAATCACGCAATGAACCTGGAATATCTGAAATGACAGACACTGGAAGTACACCTGCAGTTCATTaGACCATCTTCCTGAGTAGA +
Preference number: 4 (lower is better)
Translates to: FIESRNEPGISEMTDTGSTPAVH*TIFLSR
Trigger: TCTACTCAGGAAGATGGTTCAATGAACTGCAGGTGT...ACTTCCAGTGTCTGTCATTTCAGATATTCCAGGTTCATTGCGTGATTCAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR TCA 90 bp TTCATTGAATCACGCAATGAACCTGGAATATCTGAAATGACAGACACTGGAAGTGATAACATTTCTTGGTaGAGATGGAGGTCGGGTACA +
Preference number: 4 (lower is better)
Translates to: FIESRNEPGISEMTDTGSDNISW*RWRSGT
Trigger: TGTACCCGACCTCCATCTTCACCAAGAAATGTTATC...ACTTCCAGTGTCTGTCATTTCAGATATTCCAGGTTCATTGCGTGATTCAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR TCA 90 bp CTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTGCAGAAATTGCTGACAATTTaGGAGAGCATTTGGCACTTG +
Preference number: 4 (lower is better)
Translates to: LIGLGTSTSISRIIVCLQKLLTI*ESIWHL
Trigger: CAAGTGCCAAATGCTCTCTCAAATTGTCAGCAATTT...CTGCAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR TCA 90 bp TGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTGTCACCTAAACACCAGTaGTACAGAGGAAAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: CLIGLGTSTSISRIIVCLSPKHQ*YRGKVL
Trigger: CAGAACTTTTCCTCTGTATCACTGGTGTTTAGGTGA...CAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR TCA 90 bp TACTCATATTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAAGAGGCGGTTGCTAGATaGCCAACTATTCTGAAAATG +
Preference number: 4 (lower is better)
Translates to: YSYLSVLLDLELPPVSPEEAVAR*PTILKM
Trigger: CATTTTCAGAATAGTTGGTCATCTAGCAACCGCCTC...TTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATATGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR TCA 90 bp GACACAGGGCTCTGCAAATTGCAATGTCCCAAGCAATATACCTTAAATGTATCACTGGAATATCTGAAATaGCAGACACTGGAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: DTGLCKLQCPKQYTLNVSLEYLK*QTLEVC
Trigger: ACACACTTCCAGTGTCTGTCATTTCAGATATTCCAG...TGATACATTTAAGGTATATTGCTTGGGACATTGCAATTTGCAGAGCCCTGTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR GCA 90 bp TACACCCACACAAACACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCAAACATTTGTGCCTCTTaGCCTCAGAATGGTATAACT +
Preference number: 4 (lower is better)
Translates to: YTHTNTNTVYRHRALQIANICAS*PQNGIT
Trigger: AGTTATACCATTCTGAGGGCAAGAGGCACAAATGTT...TGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGTGTTTGTGTGGGTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR GCA 90 bp ATTGAATCACGCAATGAACCTGGAATATCTGAAATGACAGACACTGGAAGTGTGTTTCAAACTCAAACTTaGGGCTGTTCGTCCCATATC +
Preference number: 4 (lower is better)
Translates to: IESRNEPGISEMTDTGSVFQTQT*GCSSHI
Trigger: GATATGGGACGAACAGCCGCAAGTTTGAGTTTGAAA...CACACTTCCAGTGTCTGTCATTTCAGATATTCCAGGTTCATTGCGTGATTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR GCA 90 bp AGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTTTCAAACTCAAACTTaGGGCTGTTCGTCCCATATC +
Preference number: 4 (lower is better)
Translates to: SVLLDLELPPVSPELLSVFQTQT*GCSSHI
Trigger: GATATGGGACGAACAGCCGCAAGTTTGAGTTTGAAA...GACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR GCA 90 bp ATATTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTACTTCATGCCAGATaGTATCCCTCGAAGCATCCC +
Preference number: 4 (lower is better)
Translates to: IFECLIGLGTSTSISRIIVLHAR*YPSKHP
Trigger: GGGATGCTTCGAGGGATAGCATCTGGCATGAAGTAC...AATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR GCA 90 bp TGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTGGAATTATTGTCTGTCTaGAGGATGATGCTACGCCTT +
Preference number: 4 (lower is better)
Translates to: CLIGLGTSTSISRIIVCLELLSV*RMMLRL
Trigger: AAGGCGTAGCATCATCCTGCAGACAGACAATAATTC...CAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR GCA 90 bp AATCCTTCTAAGTTACACACCAAAACTGCACCATGTGCATTGAAGTGGAAGACTGAGAAATTTCTCTCCTaGTTACACATTTTGAGGCGG +
Preference number: 4 (lower is better)
Translates to: NPSKLHTKTAPCALKWKTEKFLS*LHILRR
Trigger: CCGCCTCAAAATGTGTAAGCAGGAGAGAAATTTCTC...AGTCTTCCACTTCAATGCACATGGTGCAGTTTTGGTGTGTAACTTAGAAGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR GCA 90 bp CTGTATACAGACACAGGGCTCTGCAAATTGCAATGTCCCAAGCAATATACCTTACCCCCTCCTCTAGACTaGATTGAAATAATACATACA +
Preference number: 4 (lower is better)
Translates to: LYTDTGLCKLQCPKQYTLPPPLD*IEIIHT
Trigger: TGTATGTATTATTTCAATGCAGTCTAGAGGAGGGGG...TAAGGTATATTGCTTGGGACATTGCAATTTGCAGAGCCCTGTGTCTGTATACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR GCA 90 bp GACACAGGGCTCTGCAAATTGCAATGTCCCAAGCAATATACCTTAAATGTATCACAGGGCTCTGCAAATTaGAATGTCCCAAGCAATATA +
Preference number: 4 (lower is better)
Translates to: DTGLCKLQCPKQYTLNVSQGSAN*NVPSNI
Trigger: TATATTGCTTGGGACATTGCAATTTGCAGAGCCCTG...TGATACATTTAAGGTATATTGCTTGGGACATTGCAATTTGCAGAGCCCTGTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CCA 90 bp TACTCATATTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAACATGGGTACCGTGTCTaGAAACATAGCCAGATTCTT +
Preference number: 4 (lower is better)
Translates to: YSYLSVLLDLELPPVSPEHGYRV*KHSQIL
Trigger: AAGAATCTGGCTATGTTTCCAGACACGGTACCCATG...TTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATATGAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CCA 90 bp TTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCCCTGGTCGACAAGCTTaGCACATAAAACCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: FECLIGLGTSTSISRIIVPGRQA*HIKPLS
Trigger: AGAAAGAGGTTTTATGTGCCAAGCTTGTCGACCAGG...GACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CCA 90 bp TTCATTGAATCACGCAATGAACCTGGAATATCTGAAATGACAGACACTGGAAGTCCTGGTCGACAAGCTTaGCACATAAAACCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: FIESRNEPGISEMTDTGSPGRQA*HIKPLS
Trigger: AGAAAGAGGTTTTATGTGCCAAGCTTGTCGACCAGG...ACTTCCAGTGTCTGTCATTTCAGATATTCCAGGTTCATTGCGTGATTCAATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CCA 90 bp ACCCACACAAACACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCAATGGACATTTGGGCTGCATaGCTCACACTGTTTTATATT +
Preference number: 4 (lower is better)
Translates to: THTNTNTVYRHRALQIAMDIWAA*LTLFYI
Trigger: AATATAAAACAGTGTGAGCCATGCAGCCCAAATGTC...CATTGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGTGTTTGTGTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CCA 90 bp GAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTGTTCGGGCTCGGATTTaGAATACGTATATAGTGTCA +
Preference number: 4 (lower is better)
Translates to: ECLIGLGTSTSISRIIVCVRARI*NTYIVS
Trigger: TGACACTATATACGTATTCCAAATCCGAGCCCGAAC...ACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CCA 90 bp ATTGAATCACGCAATGAACCTGGAATATCTGAAATGACAGACACTGGAAGTGTGGTTCGGGCTCGGATTTaGAATACGTATATAGTGTCA +
Preference number: 4 (lower is better)
Translates to: IESRNEPGISEMTDTGSVVRARI*NTYIVS
Trigger: TGACACTATATACGTATTCCAAATCCGAGCCCGAAC...CACACTTCCAGTGTCTGTCATTTCAGATATTCCAGGTTCATTGCGTGATTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CCA 90 bp AATCCTTCTAAGTTACACACCAAAACTGCACCATGTGCATTGAAGTGGAAGACTCAATGGATATGTTGGTaGCATCCAATTCCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: NPSKLHTKTAPCALKWKTQWICW*HPIPWQ
Trigger: TTGCCAAGGAATTGGATGCCACCAACATATCCATTG...AGTCTTCCACTTCAATGCACATGGTGCAGTTTTGGTGTGTAACTTAGAAGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR TCA 90 bp ATATTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTATAAATCTTCTGAGCTaGGTTCCTGGGGACCCAGTT +
Preference number: 4 (lower is better)
Translates to: IFECLIGLGTSTSISRIIINLLS*VPGDPV
Trigger: AACTGGGTCCCCAGGAACTCAGCTCAGAAGATTTAT...AATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp TACACCCACACAAACACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCATCAATCTTTGTAAACTaGTGCTCTCGAAATTTCACC +
Preference number: 4 (lower is better)
Translates to: YTHTNTNTVYRHRALQIASIFVN*CSRNFT
Trigger: GGTGAAATTTCGAGAGCATCAGTTTACAAAGATTGA...TGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGTGTTTGTGTGGGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR TCA 90 bp GACACAGGGCTCTGCAAATTGCAATGTCCCAAGCAATATACCTTAAATGTATCACAAGATCCATTTGAGTaGAACTTTCATCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: DTGLCKLQCPKQYTLNVSQDPFE*NFHQLQ
Trigger: TTGCAGCTGATGAAAGTTTCACTCAAATGGATCTTG...TGATACATTTAAGGTATATTGCTTGGGACATTGCAATTTGCAGAGCCCTGTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR TCA 90 bp TCATATTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTAGATAACATTTCTTGGTaGAGATGGAGGTCGGGTACA +
Preference number: 4 (lower is better)
Translates to: SYLSVLLDLELPPVSPELDNISW*RWRSGT
Trigger: TGTACCCGACCTCCATCTTCACCAAGAAATGTTATC...TAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp TTCATTGAATCACGCAATGAACCTGGAATATCTGAAATGACAGACACTGGAAGTCCAGTCCAGGATAACTaGGGTCTCGTTTATATTAGA +
Preference number: 4 (lower is better)
Translates to: FIESRNEPGISEMTDTGSPVQDN*GLVYIR
Trigger: TCTAATATAAACGAGACCTCAGTTATCCTGGACTGG...ACTTCCAGTGTCTGTCATTTCAGATATTCCAGGTTCATTGCGTGATTCAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR TCA 90 bp GAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTGCTTTAATTACATCCTaGTTGGACATCTCCCAGTAT +
Preference number: 4 (lower is better)
Translates to: ECLIGLGTSTSISRIIVCALITS*LDISQY
Trigger: ATACTGGGAGATGTCCAATCAGGATGTAATTAAAGC...ACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR TCA 90 bp TGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTGTCTAGTAGCCTGATTTaGCTAAGGAATATTGCCAAG +
Preference number: 4 (lower is better)
Translates to: CLIGLGTSTSISRIIVCLSSSLI*LRNIAK
Trigger: CTTGGCAATATTCCTTAGTCAAATCAGGCTACTAGA...CAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR GCA 90 bp GTGCTTTACACGGGAACTGGGCCATTCTTTGATTGCGTTTCTAGAGCTTTAATGAATTATTCTCACACCTaGAGTTCATTGAACCATCTT +
Preference number: 4 (lower is better)
Translates to: VLYTGTGPFFDCVSRALMNYSHT*SSLNHL
Trigger: AAGATGGTTCAATGAACTGCAGGTGTGAGAATAATT...CATTAAAGCTCTAGAAACGCAATCAAAGAATGGCCCAGTTCCCGTGTAAAGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR GCA 90 bp TCATATTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTAGGTGTAGTTAGTATGTaGCAGAAGGTCTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: SYLSVLLDLELPPVSPELGVVSM*QKVCHC
Trigger: ACAGTGACAGACCTTCTGGCACATACTAACTACACC...TAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR GCA 90 bp AGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCAACATTTGTGCCTCTTaGCCTCAGAATGGTATAACT +
Preference number: 4 (lower is better)
Translates to: SVLLDLELPPVSPELLSVNICAS*PQNGIT
Trigger: AGTTATACCATTCTGAGGGCAAGAGGCACAAATGTT...GACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR GCA 90 bp ACTGGGCCATTCTTTGATTGCGTTTCTAGAGCTTTAATGCTACTGATGATCTTCAACATTTGTGCCTCTTaGCCTCAGAATGGTATAACT +
Preference number: 4 (lower is better)
Translates to: TGPFFDCVSRALMLLMIFNICAS*PQNGIT
Trigger: AGTTATACCATTCTGAGGGCAAGAGGCACAAATGTT...GAAGATCATCAGTAGCATTAAAGCTCTAGAAACGCAATCAAAGAATGGCCCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR GCA 90 bp AATCCTTCTAAGTTACACACCAAAACTGCACCATGTGCATTGAAGTGGAAGACTGGGCCATTCTTTGATTaGGTTTCTAGAGCTTTAATG +
Preference number: 4 (lower is better)
Translates to: NPSKLHTKTAPCALKWKTGPFFD*VSRALM
Trigger: CATTAAAGCTCTAGAAACGCAATCAAAGAATGGCCC...AGTCTTCCACTTCAATGCACATGGTGCAGTTTTGGTGTGTAACTTAGAAGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR CCA 90 bp TGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTGGACATTTGGGCTGCATaGCTCACACTGTTTTATATT +
Preference number: 4 (lower is better)
Translates to: CLIGLGTSTSISRIIVCLDIWAA*LTLFYI
Trigger: AATATAAAACAGTGTGAGCCATGCAGCCCAAATGTC...CAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CCA 90 bp AATCCTTCTAAGTTACACACCAAAACTGCACCATGTGCATTGAAGTGGAAGACTTATCAATGGATATGTTaGTGGCATCCAATTCCTTGG +
Preference number: 4 (lower is better)
Translates to: NPSKLHTKTAPCALKWKTYQWIC*WHPIPW
Trigger: CCAAGGAATTGGATGCCACCAACATATCCATTGATA...AGTCTTCCACTTCAATGCACATGGTGCAGTTTTGGTGTGTAACTTAGAAGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR CCA 90 bp TTCAATCCTTCTAAGTTACACACCAAAACTGCACCATGTGCATTGAAGTGGAAGCATCTGTGGAAATCTTaGCTATTGTGTCACAAGAAC +
Preference number: 4 (lower is better)
Translates to: FNPSKLHTKTAPCALKWKHLWKS*LLCHKN
Trigger: GTTCTTGTGACACAATAGCCAAGATTTCCACAGATG...CTTCCACTTCAATGCACATGGTGCAGTTTTGGTGTGTAACTTAGAAGGATTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR TCA 90 bp AATCCTTCTAAGTTACACACCAAAACTGCACCATGTGCATTGAAGTGGAAGACTGGTATGTTATCTGGTTaGAAATCCATTGCATACAAG +
Preference number: 4 (lower is better)
Translates to: NPSKLHTKTAPCALKWKTGMLSG*KSIAYK
Trigger: CTTGTATGCAATGGATTTTCAACCAGATAACATACC...AGTCTTCCACTTCAATGCACATGGTGCAGTTTTGGTGTGTAACTTAGAAGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR TCA 90 bp TACTCATATTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAAAGCAACAATAGTAAGTaGCTTTTCAAAGCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: YSYLSVLLDLELPPVSPESNNSK*LFKASE
Trigger: CTCACTGGCTTTGAAAAGTCACTTACTATTGTTGCT...TTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATATGAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR TCA 90 bp ACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCAATGTCCCAAGCAATATCCTCTAGACTGCATTaGAATAATACATACAGTCTG +
Preference number: 4 (lower is better)
Translates to: TNTVYRHRALQIAMSQAISSRLH*NNTYSL
Trigger: CAGACTGTATGTATTATTTCAATGCAGTCTAGAGGA...TATTGCTTGGGACATTGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR GCA 90 bp TTCAATCCTTCTAAGTTACACACCAAAACTGCACCATGTGCATTGAAGTGGAAGCTCTCCAAATTCACCTaGTCCAACAACTTTATCAAT +
Preference number: 4 (lower is better)
Translates to: FNPSKLHTKTAPCALKWKLSKFT*SNNFIN
Trigger: ATTGATAAAGTTGTTGGAGCAGGTGAATTTGGAGAG...CTTCCACTTCAATGCACATGGTGCAGTTTTGGTGTGTAACTTAGAAGGATTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR GCA 90 bp TCATATTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTAGAATTATTGTCTGTCTaGAGGATGATGCTACGCCTT +
Preference number: 4 (lower is better)
Translates to: SYLSVLLDLELPPVSPELELLSV*RMMLRL
Trigger: AAGGCGTAGCATCATCCTGCAGACAGACAATAATTC...TAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CCA 90 bp ATTGAATCACGCAATGAACCTGGAATATCTGAAATGACAGACACTGGAAGTGTGCTCTTGCCCTCAGAATaGTATAACTTGTTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: IESRNEPGISEMTDTGSVLLPSE*YNLFLV
Trigger: AACAAGAAACAAGTTATACCATTCTGAGGGCAAGAG...CACACTTCCAGTGTCTGTCATTTCAGATATTCCAGGTTCATTGCGTGATTCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CCA 90 bp AATCCTTCTAAGTTACACACCAAAACTGCACCATGTGCATTGAAGTGGAAGACTGATGGAGAAAGAGTCTaGACTAGTTTCAAACTCAAA +
Preference number: 4 (lower is better)
Translates to: NPSKLHTKTAPCALKWKTDGERV*TSFKLK
Trigger: TTTGAGTTTGAAACTAGTCCAGACTCTTTCTCCATC...AGTCTTCCACTTCAATGCACATGGTGCAGTTTTGGTGTGTAACTTAGAAGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR CCA 90 bp TTCAATCCTTCTAAGTTACACACCAAAACTGCACCATGTGCATTGAAGTGGAAGCAACAACTTTATCAATaGATATGTTGGTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: FNPSKLHTKTAPCALKWKQQLYQ*ICWWHP
Trigger: TGGATGCCACCAACATATCCATTGATAAAGTTGTTG...CTTCCACTTCAATGCACATGGTGCAGTTTTGGTGTGTAACTTAGAAGGATTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR CCA 90 bp CTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTGCAGTTTTCATGTCATCTGTaGAAATCTTGGCTATTGTGT +
Preference number: 4 (lower is better)
Translates to: LIGLGTSTSISRIIVCLQFSCHL*KSWLLC
Trigger: ACACAATAGCCAAGATTTCCACAGATGACATGAAAA...CTGCAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR CCA 90 bp AGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCAGAGGCAACAATGATTaGGATAACAGATTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: SVLLDLELPPVSPELLSVRGNND*DNRFER
Trigger: TCTCTCAAATCTGTTATCCCAATCATTGTTGCCTCT...GACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR TCA 90 bp TCATATTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTACAAGATCCATTTGAGTaGAACTTTCATCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: SYLSVLLDLELPPVSPELQDPFE*NFHQLQ
Trigger: TTGCAGCTGATGAAAGTTTCACTCAAATGGATCTTG...TAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR GCA 90 bp TTCATTGAATCACGCAATGAACCTGGAATATCTGAAATGACAGACACTGGAAGTGAAACTTTCATCAGCTaGAATGGTGTCAATCTTTGT +
Preference number: 4 (lower is better)
Translates to: FIESRNEPGISEMTDTGSETFIS*NGVNLC
Trigger: ACAAAGATTGACACCATTGCAGCTGATGAAAGTTTC...ACTTCCAGTGTCTGTCATTTCAGATATTCCAGGTTCATTGCGTGATTCAATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR GCA 90 bp ATTGAATCACGCAATGAACCTGGAATATCTGAAATGACAGACACTGGAAGTGTGAATTATTCTCACACCTaGAGTTCATTGAACCATCTT +
Preference number: 4 (lower is better)
Translates to: IESRNEPGISEMTDTGSVNYSHT*SSLNHL
Trigger: AAGATGGTTCAATGAACTGCAGGTGTGAGAATAATT...CACACTTCCAGTGTCTGTCATTTCAGATATTCCAGGTTCATTGCGTGATTCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CCA 90 bp TACTCATATTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAACAACAACTTTATCAATaGATATGTTGGTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: YSYLSVLLDLELPPVSPEQQLYQ*ICWWHP
Trigger: TGGATGCCACCAACATATCCATTGATAAAGTTGTTG...TTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATATGAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CCA 90 bp TTCAATCCTTCTAAGTTACACACCAAAACTGCACCATGTGCATTGAAGTGGAAGTGTGACAATCATAACTaGCTTACTTTTGGTAACAAC +
Preference number: 4 (lower is better)
Translates to: FNPSKLHTKTAPCALKWKCDNHN*LTFGNN
Trigger: GTTGTTACCAAAAGTAAGCCAGTTATGATTGTCACA...CTTCCACTTCAATGCACATGGTGCAGTTTTGGTGTGTAACTTAGAAGGATTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR CCA 90 bp TTCAATCCTTCTAAGTTACACACCAAAACTGCACCATGTGCATTGAAGTGGAAGCCATTGCATACAAGCTaGTATATTACACTAAGTTGT +
Preference number: 4 (lower is better)
Translates to: FNPSKLHTKTAPCALKWKPLHTS*YITLSC
Trigger: ACAACTTAGTGTAATATACCAGCTTGTATGCAATGG...CTTCCACTTCAATGCACATGGTGCAGTTTTGGTGTGTAACTTAGAAGGATTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR CCA 90 bp AGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCCCATGTGCATTGAAGTaGAAGACTCTTAAAGATAAT +
Preference number: 4 (lower is better)
Translates to: SVLLDLELPPVSPELLSVPCALK*KTLKDN
Trigger: ATTATCTTTAAGAGTCTTCCACTTCAATGCACATGG...GACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336596.7
3UTR CAA 72 bp AGGCATTTGTACTCATATTTGAGTGTCTTATTGGACTaGGAACTTCCACCAGTATCTCCAGAATTATTGTCT +
Preference number: 4 (lower is better)
Translates to: RHLYSYLSVLLD*ELPPVSPELLS
Trigger: AGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATATGAGTACAAATGCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CCA 90 bp TTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTGACAATCATAACTaGCTTACTTTTGGTAACAAC +
Preference number: 4 (lower is better)
Translates to: FECLIGLGTSTSISRIIVCDNHN*LTFGNN
Trigger: GTTGTTACCAAAAGTAAGCCAGTTATGATTGTCACA...GACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR GCA 90 bp ATATTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGAAACTTTCATCAGCTaGAATGGTGTCAATCTTTGT +
Preference number: 4 (lower is better)
Translates to: IFECLIGLGTSTSISRIIETFIS*NGVNLC
Trigger: ACAAAGATTGACACCATTGCAGCTGATGAAAGTTTC...AATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR GCA 90 bp TCATATTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTAAATTATTCTCACACCTaGAGTTCATTGAACCATCTT +
Preference number: 4 (lower is better)
Translates to: SYLSVLLDLELPPVSPELNYSHT*SSLNHL
Trigger: AAGATGGTTCAATGAACTGCAGGTGTGAGAATAATT...TAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CCA 90 bp ATATTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTCTCTTGCCCTCAGAATaGTATAACTTGTTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: IFECLIGLGTSTSISRIILLPSE*YNLFLV
Trigger: AACAAGAAACAAGTTATACCATTCTGAGGGCAAGAG...AATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp GATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGGAGGAAGCGGACATTaGGGCTGCATGGCTCACACT +
Preference number: 5 (lower is better)
Translates to: DDATPSTATTSVQKHFRPGGSGH*GCMAHT
Trigger: AGTGTGAGCCATGCAGCCCAAATGTCCGCTTCCTCC...GGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp CAGGATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTGGTCCAGAAGAAGGTTaGATGGCCTTGCGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: QDDATPSTATTSVQKHFRGPEEG*MALRLH
Trigger: GTGCAGCCGCAAGGCCATCAAACCTTCTTCTGGACC...ACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATCCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp GATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCACTGTCACCGTGGTGTaGGTGAGTCCAAACTGTCGA +
Preference number: 5 (lower is better)
Translates to: DDATPSTATTSVQKHFRPTVTVV*VSPNCR
Trigger: TCGACAGTTTGGACTCACCAACACCACGGTGACAGT...GGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS TCA 90 bp GGAGGATGGAGAGCTGACAATCCATGTTGCTGGTGCAGAGGGCAGTaGGAGGAGCATATCTCCATGAAGCATGCCACTGATGTGAGGGGG +
Preference number: 5 (lower is better)
Translates to: GGWRADNPCCWCRGQ*EEHISMKHATDVRG
Trigger: CCCCCTCACATCAGTGGCATGCTTCATGGAGATATGCTCCTCTCACTGCCCTCTGCACCAGCAACATGGATTGTCAGCTCTCCATCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336596.7
ENST00000452448.6
ENST00000494014.1
CDS-3UTR CAA 90 bp ATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCCGCAGCAAACTGTCTaGGTGGGGAGCTCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: IIVCLQDDATPSTATTSVPQQTV*VGSSAL
Trigger: CAGAGCTGAGCTCCCCACCAAGACAGTTTGCTGCGG...GACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS TCA 90 bp GTGCAGAGGGCAGTGAGAGGAGCATATCTCCATGAAGCATGCCACTaGTGTGAGGGGGAGCGCTCTGATTGCTGGAGAAGTTACCATGCT +
Preference number: 5 (lower is better)
Translates to: VQRAVRGAYLHEACH*CEGERSDCWRSYHA
Trigger: AGCATGGTAACTTCTCCAGCAATCAGAGCGCTCCCCCTCACATCAGTGGCATGCTTCATGGAGATATGCTCCTCTCACTGCCCTCTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR CAA 90 bp CACCACTTCCGTCCAGAAGCACTTCCGTCCCGTGCTTTACACGGGAACTGGGCCAGTAGATTGACTTCATaGGAAGGCTGCGGAATCAGT +
Preference number: 5 (lower is better)
Translates to: HHFRPEALPSRALHGNWASRLTS*EGCGIS
Trigger: ACTGATTCCGCAGCCTTCCAATGAAGTCAATCTACT...GGCCCAGTTCCCGTGTAAAGCACGGGACGGAAGTGCTTCTGGACGGAAGTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CAA 90 bp AGGATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCGGCGATCATGACCACTaGGCTACTTTCACCAGAGAT +
Preference number: 5 (lower is better)
Translates to: RMMLRLPQPPLPSRSTSVGDHDH*ATFTRD
Trigger: ATCTCTGGTGAAAGTAGCCAAGTGGTCATGATCGCC...GACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp GATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGGATCTTCCCTCCTCTaGTTGTATAAGCAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: DDATPSTATTSVQKHFRPGSSLL*LYKQLL
Trigger: CAGAAGCTGCTTATACAACAAGAGGAGGGAAGATCC...GGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp TTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGTGCTTTACACGGGGGATCTTCCCTCCTCTaGTTGTATAAGCAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: FHSHHFRPEALPSRALHGGSSLL*LYKQLL
Trigger: CAGAAGCTGCTTATACAACAAGAGGAGGGAAGATCC...CCCGTGTAAAGCACGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CAA 90 bp CACCACTTCCGTCCAGAAGCACTTCCGTCCCGTGCTTTACACGGGAACTGGGCCACAATCTGCTCAAACTaGGGTCTGTTGTTCCTGTCT +
Preference number: 5 (lower is better)
Translates to: HHFRPEALPSRALHGNWATICSN*GLLFLS
Trigger: AGACAGGAACAACAGACCCAAGTTTGAGCAGATTGT...GGCCCAGTTCCCGTGTAAAGCACGGGACGGAAGTGCTTCTGGACGGAAGTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CAA 90 bp CCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGTGCTTTACACGACCAATGGAATGCTATaGCAGTCTCGTAGAGTGAAC +
Preference number: 5 (lower is better)
Translates to: PSTATTSVQKHFRPVLYTTNGML*QSRRVN
Trigger: GTTCACTCTACGAGACTGCAATAGCATTCCATTGGT...CGTGTAAAGCACGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CAA 90 bp GCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGTGCTTTACACTGTTCGGGCTCGGATTaGGAATACGTATATAGTGTC +
Preference number: 5 (lower is better)
Translates to: AFHSHHFRPEALPSRALHCSGSD*EYVYSV
Trigger: GACACTATATACGTATTCCAAATCCGAGCCCGAACA...GTGTAAAGCACGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CAA 90 bp GATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGTAGTGATATCCACATaGCTTTGGTCCAGAAGAAGG +
Preference number: 5 (lower is better)
Translates to: DDATPSTATTSVQKHFRPVVIST*LWSRRR
Trigger: CCTTCTTCTGGACCAAAGCAATGTGGATATCACTAC...GGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS CCA 90 bp AGCCAGTCACCTGTTGTGCGGAAGGTAGTGATATCCACATTGCTTTaGTCCAGAAGAAGGTTTGATGGCCTTGCGGCTGCACTGGTGATG +
Preference number: 5 (lower is better)
Translates to: SQSPVVRKVVISTLL*SRRRFDGLAAALVM
Trigger: CATCACCAGTGCAGCCGCAAGGCCATCAAACCTTCTTCTGGACCAAAGCAATGTGGATATCACTACCTTCCGCACAACAGGTGACTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR CAA 90 bp AGGATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCAGTAGATTGACTTCATaGGAAGGCTGCGGAATCAGT +
Preference number: 5 (lower is better)
Translates to: RMMLRLPQPPLPSRSTSVSRLTS*EGCGIS
Trigger: ACTGATTCCGCAGCCTTCCAATGAAGTCAATCTACT...GACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATCCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp ATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGTGCAGGTTGAATGTCTCCTaGCAAGTTCCTAAAACCAAT +
Preference number: 5 (lower is better)
Translates to: MLRLPQPPLPSRSTSVPCRLNVS*QVPKTN
Trigger: ATTGGTTTTAGGAACTTGCAAGGAGACATTCAACCT...GCACGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp ATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGTATATAGTGTCAGGCTaGAGGCTACTGATGGTAACA +
Preference number: 5 (lower is better)
Translates to: MMLRLPQPPLPSRSTSVPYIVSG*RLLMVT
Trigger: TGTTACCATCAGTAGCCTCAAGCCTGACACTATATA...CGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp AGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGTGCTTTACACGGGAACTGGTATATAGTGTCAGGCTaGAGGCTACTGATGGTAACA +
Preference number: 5 (lower is better)
Translates to: SHHFRPEALPSRALHGNWYIVSG*RLLMVT
Trigger: TGTTACCATCAGTAGCCTCAAGCCTGACACTATATA...CCAGTTCCCGTGTAAAGCACGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CAA 90 bp CAGGATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTGTAGTGATATCCACATaGCTTTGGTCCAGAAGAAGG +
Preference number: 5 (lower is better)
Translates to: QDDATPSTATTSVQKHFRVVIST*LWSRRR
Trigger: CCTTCTTCTGGACCAAAGCAATGTGGATATCACTAC...ACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp CAGGATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCACATTTTGAGGCGGTaGCTAGATGACCAACTATTC +
Preference number: 5 (lower is better)
Translates to: QDDATPSTATTSVQKHFRHILRR*LDDQLF
Trigger: GAATAGTTGGTCATCTAGCAACCGCCTCAAAATGTG...ACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS GCA 90 bp GTCACAAGAACTGTACTCCACACCCGTGAAGATTTCCTTGCAGTGTaGTGTCCAGACACCATTAAGCCAGTCACCTGTTGTGCGGAAGGT +
Preference number: 5 (lower is better)
Translates to: VTRTVLHTREDFLAV*CPDTIKPVTCCAEG
Trigger: ACCTTCCGCACAACAGGTGACTGGCTTAATGGTGTCTGGACAGCACACTGCAAGGAAATCTTCACGGGTGTGGAGTACAGTTCTTGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS CCA 90 bp TTGCGGCTGTTCGTCCCATATCCAGCGGCTGTTCGGGCTCGGATTTaGAATACGTATATAGTGTCAGGCTTGAGGCTACTGATGGTAACA +
Preference number: 5 (lower is better)
Translates to: LRLFVPYPAAVRARI*NTYIVSGLRLLMVT
Trigger: TGTTACCATCAGTAGCCTCAAGCCTGACACTATATACGTATTCCAAATCCGAGCCCGAACAGCCGCTGGATATGGGACGAACAGCCGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336596.7
ENST00000452448.6
ENST00000494014.1
CDS-3UTR CAA 90 bp ATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCACCACTTCCGTCGGCGATCATGACCACTaGGCTACTTTCACCAGAGAT +
Preference number: 5 (lower is better)
Translates to: IIVCLQDDATPSTATTSVGDHDH*ATFTRD
Trigger: ATCTCTGGTGAAAGTAGCCAAGTGGTCATGATCGCC...GACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp ATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCAGAAGCACTTCCGTCCCGTATTTGAGTGTCTTATaGGACTTGGAACTTCCACCA +
Preference number: 5 (lower is better)
Translates to: MMLRLPQPPLPSRSTSVPYLSVL*DLELPP
Trigger: TGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATA...CGGGACGGAAGTGCTTCTGGACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp ACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCAATGTCCCAAGCAATAGCCAGGAGGCGGAGCTaGCAGGAGCTTGCAGTGAGC +
Preference number: 5 (lower is better)
Translates to: TNTVYRHRALQIAMSQAIARRRS*QELAVS
Trigger: GCTCACTGCAAGCTCCTGCAAGCTCCGCCTCCTGGC...TATTGCTTGGGACATTGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS CCA 90 bp CCCTCTAACCTCCACCAGGGACTGGGAGTCCATGGGTACCGTGTCTaGAAACATAGCCAGATTCTTCACTGTAAATGGGCACTTTTTGAA +
Preference number: 5 (lower is better)
Translates to: PSNLHQGLGVHGYRV*KHSQILHCKWALFE
Trigger: TTCAAAAAGTGCCCATTTACAGTGAAGAATCTGGCTATGTTTCCAGACACGGTACCCATGGACTCCCAGTCCCTGGTGGAGGTTAGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336596.7
ENST00000452448.6
ENST00000494014.1
CDS-3UTR CAA 90 bp GGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTGCAGGATGATGGAGGAAGCGGACATTaGGGCTGCATGGCTCACACT +
Preference number: 5 (lower is better)
Translates to: GLGTSTSISRIIVCLQDDGGSGH*GCMAHT
Trigger: AGTGTGAGCCATGCAGCCCAAATGTCCGCTTCCTCC...ATCATCCTGCAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp AAACACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCAATGTCCCAAGCCCGCAGCAAACTGTCTaGGTGGGGAGCTCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: KHKYCIQTQGSANCNVPSPQQTV*VGSSAL
Trigger: CAGAGCTGAGCTCCCCACCAAGACAGTTTGCTGCGG...GCTTGGGACATTGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CAA 90 bp CCGTCCAGAAGCACTTCCGTCCCGTGCTTTACACGGGAACTGGGCCATTCTTTGATAACTGGCTTACTTTaGGTAACAACTCCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: PSRSTSVPCFTRELGHSLITGLL*VTTPSS
Trigger: ACTGGAAGGAGTTGTTACCAAAAGTAAGCCAGTTAT...CAAAGAATGGCCCAGTTCCCGTGTAAAGCACGGGACGGAAGTGCTTCTGGACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CAA 90 bp GTATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCACCCGTGAAGATTTCCTaGCAGTGTGCTGTCCAGACA +
Preference number: 5 (lower is better)
Translates to: VSPELLSVCRMMLRLPQPPVKIS*QCAVQT
Trigger: TGTCTGGACAGCACACTGCAAGGAAATCTTCACGGG...TGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS CCA 90 bp TTTCATGTCACTGTTGTGCGGAAGGTAGTGATATCCACATTGCTTTaGTCCAGAAGAAGGTTTGATGGCCTTGCGGCTGCACTGGTGATG +
Preference number: 5 (lower is better)
Translates to: FHVTVVRKVVISTLL*SRRRFDGLAAALVM
Trigger: CATCACCAGTGCAGCCGCAAGGCCATCAAACCTTCTTCTGGACCAAAGCAATGTGGATATCACTACCTTCCGCACAACAGTGACATGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CAA 90 bp ACCCACACAAACACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCAATGGGAGGAAGCGGACATTaGGGCTGCATGGCTCACACT +
Preference number: 5 (lower is better)
Translates to: THTNTNTVYRHRALQIAMGGSGH*GCMAHT
Trigger: AGTGTGAGCCATGCAGCCCAAATGTCCGCTTCCTCC...CATTGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGTGTTTGTGTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CAA 90 bp AGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCCCGCAGCAAACTGTCTaGGTGGGGAGCTCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: SVLLDLELPPVSPELLSVPQQTV*VGSSAL
Trigger: CAGAGCTGAGCTCCCCACCAAGACAGTTTGCTGCGG...GACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp ATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCACCTCTTCCCTCCTCTTGTaGTATAAGCAGCTTCTGGGT +
Preference number: 5 (lower is better)
Translates to: ISRIIVCLQDDATPSTATSSLLL*YKQLLG
Trigger: ACCCAGAAGCTGCTTATACAACAAGAGGAGGGAAGA...GGTGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS TCA 90 bp GTCTTTGTCTGCCCGGAAGTAATTATTCTCACACCTGCAGTTCATTaGACCATCTTCCTGAGTAGAACTGTGAGGCGGGCACTTAGCACA +
Preference number: 5 (lower is better)
Translates to: VFVCPEVIILTPAVH*TIFLSRTVRRALST
Trigger: TGTGCTAAGTGCCCGCCTCACAGTTCTACTCAGGAAGATGGTTCAATGAACTGCAGGTGTGAGAATAATTACTTCCGGGCAGACAAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336596.7
ENST00000452448.6
ENST00000494014.1
CDS-3UTR CAA 90 bp ATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCACCACTTCCGTCCCAGCTCCCCTTGAATaGTTTTTGAATCCAGTAGAT +
Preference number: 5 (lower is better)
Translates to: IIVCLQDDATPSTATTSVPAPLE*FLNPVD
Trigger: ATCTACTGGATTCAAAAACAATTCAAGGGGAGCTGG...GACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp TTCCGTCCCGTGCTTTACACGGGAACTGGGCCATTCTTTGATTGCGTTTCTAGATCTCTAATCTCAGTGTaGAGCTTCAGAATACGGTCC +
Preference number: 5 (lower is better)
Translates to: FRPVLYTGTGPFFDCVSRSLISV*SFRIRS
Trigger: GGACCGTATTCTGAAGCTCAACACTGAGATTAGAGA...TCTAGAAACGCAATCAAAGAATGGCCCAGTTCCCGTGTAAAGCACGGGACGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CAA 90 bp TCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCACCATGTTCGGGCTCGGATTaGGAATACGTATATAGTGTC +
Preference number: 5 (lower is better)
Translates to: SPELLSVCRMMLRLPQPPCSGSD*EYVYSV
Trigger: GACACTATATACGTATTCCAAATCCGAGCCCGAACA...TGGTGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp TCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCACCAGTTTCAAACTCAAACTaGCGGCTGTTCGTCCCATAT +
Preference number: 5 (lower is better)
Translates to: SPELLSVCRMMLRLPQPPVSNSN*RLFVPY
Trigger: ATATGGGACGAACAGCCGCAAGTTTGAGTTTGAAAC...TGGTGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp ATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCACCCACACCAAGTTACTGTaGATCAAGATGTTCCGAGCA +
Preference number: 5 (lower is better)
Translates to: ISRIIVCLQDDATPSTATHTKLL*IKMFRA
Trigger: TGCTCGGAACATCTTGATCAACAGTAACTTGGTGTG...GGTGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp TCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCACCACACACCAAGTTACTGTaGATCAAGATGTTCCGAGCA +
Preference number: 5 (lower is better)
Translates to: SPELLSVCRMMLRLPQPPHTKLL*IKMFRA
Trigger: TGCTCGGAACATCTTGATCAACAGTAACTTGGTGTG...TGGTGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp ATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCACCACTTCCGTCGGATTCCGGATAAGCTaGTCCAGAATACTAACAATC +
Preference number: 5 (lower is better)
Translates to: IIVCLQDDATPSTATTSVGFRIS*SRILTI
Trigger: GATTGTTAGTATTCTGGACAAGCTTATCCGGAATCC...GACGGAAGTGGTGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp GAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTGGTCCAGAAGAAGGTTaGATGGCCTTGCGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: ECLIGLGTSTSISRIIVCGPEEG*MALRLH
Trigger: GTGCAGCCGCAAGGCCATCAAACCTTCTTCTGGACC...ACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp AGTATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCTCCTGCTTACACATTTaGAGGCGGTTGCTAGATGAC +
Preference number: 5 (lower is better)
Translates to: SISRIIVCLQDDATPSTASCLHI*RRLLDD
Trigger: GTCATCTAGCAACCGCCTCAAAATGTGTAAGCAGGA...GGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR CAA 90 bp TACACCCACACAAACACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCAACTGTCACCGTGGTGTaGGTGAGTCCAAACTGTCGA +
Preference number: 5 (lower is better)
Translates to: YTHTNTNTVYRHRALQIATVTVV*VSPNCR
Trigger: TCGACAGTTTGGACTCACCAACACCACGGTGACAGT...TGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGTGTTTGTGTGGGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CAA 90 bp CTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTGCAGACTGTCACCGTGGTGTaGGTGAGTCCAAACTGTCGA +
Preference number: 5 (lower is better)
Translates to: LIGLGTSTSISRIIVCLQTVTVV*VSPNCR
Trigger: TCGACAGTTTGGACTCACCAACACCACGGTGACAGT...CTGCAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp TTCCGTCCCGTGCTTTACACGGGAACTGGGCCATTCTTTGATTGCGTTTCTAGAAGTGTCTTATTGGACTaGGAACTTCCACCAGTATCT +
Preference number: 5 (lower is better)
Translates to: FRPVLYTGTGPFFDCVSRSVLLD*ELPPVS
Trigger: AGATACTGGTGGAAGTTCCAAGTCCAATAAGACACT...TCTAGAAACGCAATCAAAGAATGGCCCAGTTCCCGTGTAAAGCACGGGACGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CAA 90 bp AAACACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCAATGTCCCAAGCACGATCAGACATCTTTaGCAAGATCCCTGCCCCCTC +
Preference number: 5 (lower is better)
Translates to: KHKYCIQTQGSANCNVPSTIRHL*QDPCPL
Trigger: GAGGGGGCAGGGATCTTGCAAAAGATGTCTGATCGT...GCTTGGGACATTGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS CCA 90 bp AGGAGAATAATTGCTACTGCCGCTGAAATGGCGATCATGACCACTTaGCTACTTTCACCAGAGATGGAGAAAGAGTCTGGACTAGTTTCA +
Preference number: 5 (lower is better)
Translates to: RRIIATAAEMAIMTT*LLSPEMEKESGLVS
Trigger: TGAAACTAGTCCAGACTCTTTCTCCATCTCTGGTGAAAGTAGCCAAGTGGTCATGATCGCCATTTCAGCGGCAGTAGCAATTATTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp AGTATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCTCTCAGCCAATTGTTTaGACTGTGGTCCATGACATT +
Preference number: 5 (lower is better)
Translates to: SISRIIVCLQDDATPSTASQPIV*TVVHDI
Trigger: AATGTCATGGACCACAGTCAAAACAATTGGCTGAGA...GGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp GTTTCTAGAGCTTTAATGCTACTGATGATCTTCTTCTGTGGCCCAACCACGGTGGTCCCCAAGATCCATTaGAGTGAAACTTTCATCAGC +
Preference number: 5 (lower is better)
Translates to: VSRALMLLMIFFCGPTTVVPKIH*SETFIS
Trigger: GCTGATGAAAGTTTCACTCAAATGGATCTTGGGGAC...CACCGTGGTTGGGCCACAGAAGAAGATCATCAGTAGCATTAAAGCTCTAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CAA 90 bp AGAGCTTTAATGCTACTGATGATCTTCTTCTGTGGCCCAACCACGGTGACACCATCTTCCTCCTTAGAATaGTTGACACAAGACCCTCTA +
Preference number: 5 (lower is better)
Translates to: RALMLLMIFFCGPTTVTPSSSLE*LTQDPL
Trigger: TAGAGGGTCTTGTGTCAACAATTCTAAGGAGGAAGA...TGGTGTCACCGTGGTTGGGCCACAGAAGAAGATCATCAGTAGCATTAAAGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CAA 90 bp CTGTATACAGACACAGGGCTCTGCAAATTGCAATGTCCCAAGCAATATACCTTAGCATTGCAGGAACACTaGCCAATGGGTACAAGCCAT +
Preference number: 5 (lower is better)
Translates to: LYTDTGLCKLQCPKQYTLALQEH*PMGTSH
Trigger: ATGGCTTGTACCCATTGGCAAGTGTTCCTGCAATGC...TAAGGTATATTGCTTGGGACATTGCAATTTGCAGAGCCCTGTGTCTGTATACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CAA 90 bp ATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCACCTGGAAATCTTGGCTATaGTGTCACAAGAACTGTACT +
Preference number: 5 (lower is better)
Translates to: ISRIIVCLQDDATPSTATWKSWL*CHKNCT
Trigger: AGTACAGTTCTTGTGACACAATAGCCAAGATTTCCA...GGTGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR CAA 90 bp GTATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCAGTATCTCCAGAATTATaGTCTGTCTGCAGGATGATG +
Preference number: 5 (lower is better)
Translates to: VSPELLSVCRMMLRLPQPVSPEL*SVCRMM
Trigger: CATCATCCTGCAGACAGACAATAATTCTGGAGATAC...TGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS TCA 90 bp CAAAACATAGATGACAACAGTGAGGAGAATAATTGCTACTGCCGCTaGAATGGCGATCATGACCACTTGGCTACTTTCACCAGAGATGGA +
Preference number: 5 (lower is better)
Translates to: QNIDDNSEENNCYCR*NGDHDHLATFTRDG
Trigger: TCCATCTCTGGTGAAAGTAGCCAAGTGGTCATGATCGCCATTTCAGCGGCAGTAGCAATTATTCTCCTCACTGTTGTCATCTATGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS CCA 90 bp CATGGGTACCGTGTCTGGAAACATAGCCAGATTCTTCACTGTAAATaGGCACTTTTTGAAGTATACTCTCACAGACACCAAGGCAACACA +
Preference number: 5 (lower is better)
Translates to: HGYRVWKHSQILHCK*ALFEVYSHRHQGNT
Trigger: TGTGTTGCCTTGGTGTCTGTGAGAGTATACTTCAAAAAGTGCCCATTTACAGTGAAGAATCTGGCTATGTTTCCAGACACGGTACCCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336596.7
ENST00000452448.6
ENST00000494014.1
CDS-3UTR CAA 90 bp GGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTGCAGGATGATTCCTCCTTAGAATTGTaGACACAAGACCCTCTAACC +
Preference number: 5 (lower is better)
Translates to: GLGTSTSISRIIVCLQDDSSLEL*TQDPLT
Trigger: GGTTAGAGGGTCTTGTGTCAACAATTCTAAGGAGGA...ATCATCCTGCAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp GAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTGCATTGCAGGAACACTaGCCAATGGGTACAAGCCAT +
Preference number: 5 (lower is better)
Translates to: ECLIGLGTSTSISRIIVCALQEH*PMGTSH
Trigger: ATGGCTTGTACCCATTGGCAAGTGTTCCTGCAATGC...ACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp GTATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCATTATCAATGGATATGTaGGTGGCATCCAATTCCTTG +
Preference number: 5 (lower is better)
Translates to: VSPELLSVCRMMLRLPQPLSMDM*VASNSL
Trigger: CAAGGAATTGGATGCCACCAACATATCCATTGATAA...TGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp GGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTGCAGGATGATACAATCTGCTCAAACTaGGGTCTGTTGTTCCTGTCT +
Preference number: 5 (lower is better)
Translates to: GLGTSTSISRIIVCLQDDTICSN*GLLFLS
Trigger: AGACAGGAACAACAGACCCAAGTTTGAGCAGATTGT...ATCATCCTGCAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp GTTTCTAGAGCTTTAATGCTACTGATGATCTTCTTCTGTGGCCCAACCACGGTGGGATTCCGGATAAGCTaGTCCAGAATACTAACAATC +
Preference number: 5 (lower is better)
Translates to: VSRALMLLMIFFCGPTTVGFRIS*SRILTI
Trigger: GATTGTTAGTATTCTGGACAAGCTTATCCGGAATCC...CACCGTGGTTGGGCCACAGAAGAAGATCATCAGTAGCATTAAAGCTCTAGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CAA 90 bp GGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTGCAGGATGATGAACTGGGCCATTCTTaGATTGCGTTTCTAGAGCTT +
Preference number: 5 (lower is better)
Translates to: GLGTSTSISRIIVCLQDDELGHS*IAFLEL
Trigger: AAGCTCTAGAAACGCAATCAAAGAATGGCCCAGTTC...ATCATCCTGCAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp GTATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCATATTTGAGTGTCTTATaGGACTTGGAACTTCCACCA +
Preference number: 5 (lower is better)
Translates to: VSPELLSVCRMMLRLPQPYLSVL*DLELPP
Trigger: TGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATA...TGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp ACCCACACAAACACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCAATGAGTAGATTGACTTCATaGGAAGGCTGCGGAATCAGT +
Preference number: 5 (lower is better)
Translates to: THTNTNTVYRHRALQIAMSRLTS*EGCGIS
Trigger: ACTGATTCCGCAGCCTTCCAATGAAGTCAATCTACT...CATTGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGTGTTTGTGTGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CAA 90 bp TTAATGCTACTGATGATCTTCTTCTGTGGCCCAACCACGGTGACACCAACCTTTAGGTTGAATGTCTCCTaGCAAGTTCCTAAAACCAAT +
Preference number: 5 (lower is better)
Translates to: LMLLMIFFCGPTTVTPTFRLNVS*QVPKTN
Trigger: ATTGGTTTTAGGAACTTGCAAGGAGACATTCAACCT...AAAGGTTGGTGTCACCGTGGTTGGGCCACAGAAGAAGATCATCAGTAGCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CAA 90 bp AAACACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCAATGTCCCAAGCGTCCCCAAGATCCATTaGAGTGAAACTTTCATCAGC +
Preference number: 5 (lower is better)
Translates to: KHKYCIQTQGSANCNVPSVPKIH*SETFIS
Trigger: GCTGATGAAAGTTTCACTCAAATGGATCTTGGGGAC...GCTTGGGACATTGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CAA 90 bp CTGTATACAGACACAGGGCTCTGCAAATTGCAATGTCCCAAGCAATATACCTTATGTTCGGGCTCGGATTaGGAATACGTATATAGTGTC +
Preference number: 5 (lower is better)
Translates to: LYTDTGLCKLQCPKQYTLCSGSD*EYVYSV
Trigger: GACACTATATACGTATTCCAAATCCGAGCCCGAACA...TAAGGTATATTGCTTGGGACATTGCAATTTGCAGAGCCCTGTGTCTGTATACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CAA 90 bp AAACACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCAATGTCCCAAGCGTTTCAAACTCAAACTaGCGGCTGTTCGTCCCATAT +
Preference number: 5 (lower is better)
Translates to: KHKYCIQTQGSANCNVPSVSNSN*RLFVPY
Trigger: ATATGGGACGAACAGCCGCAAGTTTGAGTTTGAAAC...GCTTGGGACATTGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CAA 90 bp AATCCTTCTAAGTTACACACCAAAACTGCACCATGTGCATTGAAGTGGAAGACTCATCTGCCCCATGTTTaGACTTATAGCCACAGAACC +
Preference number: 5 (lower is better)
Translates to: NPSKLHTKTAPCALKWKTHLPHV*TYSHRT
Trigger: GGTTCTGTGGCTATAAGTCAAAACATGGGGCAGATG...AGTCTTCCACTTCAATGCACATGGTGCAGTTTTGGTGTGTAACTTAGAAGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR CAA 90 bp TTAATGCTACTGATGATCTTCTTCTGTGGCCCAACCACGGTGACACCAACCTTTTTATCAATGGATATGTaGGTGGCATCCAATTCCTTG +
Preference number: 5 (lower is better)
Translates to: LMLLMIFFCGPTTVTPTFLSMDM*VASNSL
Trigger: CAAGGAATTGGATGCCACCAACATATCCATTGATAA...AAAGGTTGGTGTCACCGTGGTTGGGCCACAGAAGAAGATCATCAGTAGCATTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CAA 90 bp ACTGGGCCATTCTTTGATTGCGTTTCTAGAGCTTTAATGCTACTGATGATCTTCTCTTCCCTCCTCTTGTaGTATAAGCAGCTTCTGGGT +
Preference number: 5 (lower is better)
Translates to: TGPFFDCVSRALMLLMIFSSLLL*YKQLLG
Trigger: ACCCAGAAGCTGCTTATACAACAAGAGGAGGGAAGA...GAAGATCATCAGTAGCATTAAAGCTCTAGAAACGCAATCAAAGAATGGCCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CAA 90 bp GTATCTCCAGAATTATTGTCTGTCTGCAGGATGATGCTACGCCTTCCACAGCCAATATGGCCAGATAGTTaGAGGTATAAATTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: VSPELLSVCRMMLRLPQPIWPDS*RYKFLC
Trigger: ACAGAGGAATTTATACCTCAAACTATCTGGCCATAT...TGGCTGTGGAAGGCGTAGCATCATCCTGCAGACAGACAATAATTCTGGAGATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR CAA 90 bp GGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTGCAGGATGATGAGAGCATTTGGCACTaGGCTGTAACAAATCCATAT +
Preference number: 5 (lower is better)
Translates to: GLGTSTSISRIIVCLQDDESIWH*AVTNPY
Trigger: ATATGGATTTGTTACAGCCAAGTGCCAAATGCTCTC...ATCATCCTGCAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR CAA 90 bp TACACCCACACAAACACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCAACAGGGCTCTGCAAATaGCAATGTCCCAAGCAATAT +
Preference number: 5 (lower is better)
Translates to: YTHTNTNTVYRHRALQIATGLCK*QCPKQY
Trigger: ATATTGCTTGGGACATTGCAATTTGCAGAGCCCTGT...TGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGTGTTTGTGTGGGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CAA 90 bp ACCCACACAAACACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCAATGCCAGCTCCCCTTGAATaGTTTTTGAATCCAGTAGAT +
Preference number: 5 (lower is better)
Translates to: THTNTNTVYRHRALQIAMPAPLE*FLNPVD
Trigger: ATCTACTGGATTCAAAAACAATTCAAGGGGAGCTGG...CATTGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGTGTTTGTGTGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CAA 90 bp GGAACTGGGCCATTCTTTGATTGCGTTTCTAGAGCTTTAATGCTACTGATGATCCCAGCTCCCCTTGAATaGTTTTTGAATCCAGTAGAT +
Preference number: 5 (lower is better)
Translates to: GTGPFFDCVSRALMLLMIPAPLE*FLNPVD
Trigger: ATCTACTGGATTCAAAAACAATTCAAGGGGAGCTGG...GATCATCAGTAGCATTAAAGCTCTAGAAACGCAATCAAAGAATGGCCCAGTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS-3UTR CAA 90 bp CTGTATACAGACACAGGGCTCTGCAAATTGCAATGTCCCAAGCAATATACCTTATCTCAGCCAATTGTTTaGACTGTGGTCCATGACATT +
Preference number: 5 (lower is better)
Translates to: LYTDTGLCKLQCPKQYTLSQPIV*TVVHDI
Trigger: AATGTCATGGACCACAGTCAAAACAATTGGCTGAGA...TAAGGTATATTGCTTGGGACATTGCAATTTGCAGAGCCCTGTGTCTGTATACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CAA 90 bp AATCCTTCTAAGTTACACACCAAAACTGCACCATGTGCATTGAAGTGGAAGACTACCAATGGAATGCTATaGCAGTCTCGTAGAGTGAAC +
Preference number: 5 (lower is better)
Translates to: NPSKLHTKTAPCALKWKTTNGML*QSRRVN
Trigger: GTTCACTCTACGAGACTGCAATAGCATTCCATTGGT...AGTCTTCCACTTCAATGCACATGGTGCAGTTTTGGTGTGTAACTTAGAAGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR CAA 90 bp ATTGAATCACGCAATGAACCTGGAATATCTGAAATGACAGACACTGGAAGTGTGACCAATGGAATGCTATaGCAGTCTCGTAGAGTGAAC +
Preference number: 5 (lower is better)
Translates to: IESRNEPGISEMTDTGSVTNGML*QSRRVN
Trigger: GTTCACTCTACGAGACTGCAATAGCATTCCATTGGT...CACACTTCCAGTGTCTGTCATTTCAGATATTCCAGGTTCATTGCGTGATTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CAA 90 bp TGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTGTCTCTAATCTCAGTGTaGAGCTTCAGAATACGGTCC +
Preference number: 5 (lower is better)
Translates to: CLIGLGTSTSISRIIVCLSLISV*SFRIRS
Trigger: GGACCGTATTCTGAAGCTCAACACTGAGATTAGAGA...CAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp ATTGAATCACGCAATGAACCTGGAATATCTGAAATGACAGACACTGGAAGTGTGTCCTCCTTAGAATTGTaGACACAAGACCCTCTAACC +
Preference number: 5 (lower is better)
Translates to: IESRNEPGISEMTDTGSVSSLEL*TQDPLT
Trigger: GGTTAGAGGGTCTTGTGTCAACAATTCTAAGGAGGA...CACACTTCCAGTGTCTGTCATTTCAGATATTCCAGGTTCATTGCGTGATTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CAA 90 bp AGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTCCTCCTTAGAATTGTaGACACAAGACCCTCTAACC +
Preference number: 5 (lower is better)
Translates to: SVLLDLELPPVSPELLSVSSLEL*TQDPLT
Trigger: GGTTAGAGGGTCTTGTGTCAACAATTCTAAGGAGGA...GACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp ACCCACACAAACACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCAATGTATATAGTGTCAGGCTaGAGGCTACTGATGGTAACA +
Preference number: 5 (lower is better)
Translates to: THTNTNTVYRHRALQIAMYIVSG*RLLMVT
Trigger: TGTTACCATCAGTAGCCTCAAGCCTGACACTATATA...CATTGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGTGTTTGTGTGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CAA 90 bp TACTCATATTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAACATCTGCCCCATGTTTaGACTTATAGCCACAGAACC +
Preference number: 5 (lower is better)
Translates to: YSYLSVLLDLELPPVSPEHLPHV*TYSHRT
Trigger: GGTTCTGTGGCTATAAGTCAAAACATGGGGCAGATG...TTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATATGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS GCA 90 bp TATAGTGTCAGGCTTGAGGCTACTGATGGTAACATTTGTGCCTCTTaGCCTCAGAATGGTATAACTTGTTTCTTGTTCCTGCTTTTCATA +
Preference number: 5 (lower is better)
Translates to: YSVRLEATDGNICAS*PQNGITCFLFLLFI
Trigger: TATGAAAAGCAGGAACAAGAAACAAGTTATACCATTCTGAGGGCAAGAGGCACAAATGTTACCATCAGTAGCCTCAAGCCTGACACTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336596.7
ENST00000452448.6
ENST00000494014.1
CDS GCA 90 bp AACGATCAGACATCTTTTGCAAGATCCCTGCCCCCTCCTCTAGACTaGATTGAAATAATACATACAGTCTGGACTAGTTTCAAACTCAAA +
Preference number: 5 (lower is better)
Translates to: NDQTSFARSLPPPLD*IEIIHTVWTSFKLK
Trigger: TTTGAGTTTGAAACTAGTCCAGACTGTATGTATTATTTCAATGCAGTCTAGAGGAGGGGGCAGGGATCTTGCAAAAGATGTCTGATCGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CAA 90 bp GACACAGGGCTCTGCAAATTGCAATGTCCCAAGCAATATACCTTAAATGTATCATTTGAATCCAGTAGATaGACTTCATTGGAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: DTGLCKLQCPKQYTLNVSFESSR*TSLEGC
Trigger: GCAGCCTTCCAATGAAGTCAATCTACTGGATTCAAA...TGATACATTTAAGGTATATTGCTTGGGACATTGCAATTTGCAGAGCCCTGTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CAA 90 bp AGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTCTCAGCCAATTGTTTaGACTGTGGTCCATGACATT +
Preference number: 5 (lower is better)
Translates to: SVLLDLELPPVSPELLSVSQPIV*TVVHDI
Trigger: AATGTCATGGACCACAGTCAAAACAATTGGCTGAGA...GACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp TACTCATATTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAAGTCCCCAAGATCCATTaGAGTGAAACTTTCATCAGC +
Preference number: 5 (lower is better)
Translates to: YSYLSVLLDLELPPVSPEVPKIH*SETFIS
Trigger: GCTGATGAAAGTTTCACTCAAATGGATCTTGGGGAC...TTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATATGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp TTCATTGAATCACGCAATGAACCTGGAATATCTGAAATGACAGACACTGGAAGTTCTCTAATCTCAGTGTaGAGCTTCAGAATACGGTCC +
Preference number: 5 (lower is better)
Translates to: FIESRNEPGISEMTDTGSSLISV*SFRIRS
Trigger: GGACCGTATTCTGAAGCTCAACACTGAGATTAGAGA...ACTTCCAGTGTCTGTCATTTCAGATATTCCAGGTTCATTGCGTGATTCAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CAA 90 bp TGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTGTCTTCCTCCTTAGAATaGTTGACACAAGACCCTCTA +
Preference number: 5 (lower is better)
Translates to: CLIGLGTSTSISRIIVCLSSSLE*LTQDPL
Trigger: TAGAGGGTCTTGTGTCAACAATTCTAAGGAGGAAGA...CAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp ACAAATACTGTATACAGACACAGGGCTCTGCAAATTGCAATGTCCCAAGCAATATCTTCCTCCTTAGAATaGTTGACACAAGACCCTCTA +
Preference number: 5 (lower is better)
Translates to: TNTVYRHRALQIAMSQAISSSLE*LTQDPL
Trigger: TAGAGGGTCTTGTGTCAACAATTCTAAGGAGGAAGA...TATTGCTTGGGACATTGCAATTTGCAGAGCCCTGTGTCTGTATACAGTATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CAA 90 bp ATATTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGCATTGCAGGAACACTaGCCAATGGGTACAAGCCAT +
Preference number: 5 (lower is better)
Translates to: IFECLIGLGTSTSISRIIALQEH*PMGTSH
Trigger: ATGGCTTGTACCCATTGGCAAGTGTTCCTGCAATGC...AATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp AGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCGTATCTCCAGAATTATaGTCTGTCTGCAGGATGATG +
Preference number: 5 (lower is better)
Translates to: SVLLDLELPPVSPELLSVVSPEL*SVCRMM
Trigger: CATCATCCTGCAGACAGACAATAATTCTGGAGATAC...GACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp CTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTCTGCAGAATTTGAGAGAGCATTaGGCACTTGGCTGTAACAAA +
Preference number: 5 (lower is better)
Translates to: LIGLGTSTSISRIIVCLQNLREH*ALGCNK
Trigger: TTTGTTACAGCCAAGTGCCAAATGCTCTCTCAAATT...CTGCAGACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR CAA 90 bp AATCCTTCTAAGTTACACACCAAAACTGCACCATGTGCATTGAAGTGGAAGACTACTGCACCATGTGCATaGAAGTGGAAGACTCTTAAA +
Preference number: 5 (lower is better)
Translates to: NPSKLHTKTAPCALKWKTTAPCA*KWKTLK
Trigger: TTTAAGAGTCTTCCACTTCAATGCACATGGTGCAGT...AGTCTTCCACTTCAATGCACATGGTGCAGTTTTGGTGTGTAACTTAGAAGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR CAA 90 bp GACACAGGGCTCTGCAAATTGCAATGTCCCAAGCAATATACCTTAAATGTATCAAGGTTGAATGTCTCCTaGCAAGTTCCTAAAACCAAT +
Preference number: 5 (lower is better)
Translates to: DTGLCKLQCPKQYTLNVSRLNVS*QVPKTN
Trigger: ATTGGTTTTAGGAACTTGCAAGGAGACATTCAACCT...TGATACATTTAAGGTATATTGCTTGGGACATTGCAATTTGCAGAGCCCTGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CAA 90 bp TCATATTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTAGTTTCAAACTCAAACTaGCGGCTGTTCGTCCCATAT +
Preference number: 5 (lower is better)
Translates to: SYLSVLLDLELPPVSPELVSNSN*RLFVPY
Trigger: ATATGGGACGAACAGCCGCAAGTTTGAGTTTGAAAC...TAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp GAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTGTCTGTATAACTGGCTTACTTTaGGTAACAACTCCTTCCAGT +
Preference number: 5 (lower is better)
Translates to: ECLIGLGTSTSISRIIVCITGLL*VTTPSS
Trigger: ACTGGAAGGAGTTGTTACCAAAAGTAAGCCAGTTAT...ACAGACAATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp TCATATTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTAGAACTGGGCCATTCTTaGATTGCGTTTCTAGAGCTT +
Preference number: 5 (lower is better)
Translates to: SYLSVLLDLELPPVSPELELGHS*IAFLEL
Trigger: AAGCTCTAGAAACGCAATCAAAGAATGGCCCAGTTC...TAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS-3UTR CAA 90 bp AATCCTTCTAAGTTACACACCAAAACTGCACCATGTGCATTGAAGTGGAAGACTCTGGTTGAAAATCCATaGCATACAAGCTGGTATATT +
Preference number: 5 (lower is better)
Translates to: NPSKLHTKTAPCALKWKTLVENP*HTSWYI
Trigger: AATATACCAGCTTGTATGCAATGGATTTTCAACCAG...AGTCTTCCACTTCAATGCACATGGTGCAGTTTTGGTGTGTAACTTAGAAGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS-3UTR CAA 90 bp TTCATTGAATCACGCAATGAACCTGGAATATCTGAAATGACAGACACTGGAAGTCAGCAAGTTTCTTTTTaGTGGTTCATTGAATCACGC +
Preference number: 5 (lower is better)
Translates to: FIESRNEPGISEMTDTGSQQVSF*WFIESR
Trigger: GCGTGATTCAATGAACCACAAAAAAGAAACTTGCTG...ACTTCCAGTGTCTGTCATTTCAGATATTCCAGGTTCATTGCGTGATTCAATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS-3UTR CAA 90 bp ATATTTGAGTGTCTTATTGGACTTGGAACTTCCACCAGTATCTCCAGAATTATTTTTGAATCCAGTAGATaGACTTCATTGGAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: IFECLIGLGTSTSISRIIFESSR*TSLEGC
Trigger: GCAGCCTTCCAATGAAGTCAATCTACTGGATTCAAA...AATAATTCTGGAGATACTGGTGGAAGTTCCAAGTCCAATAAGACACTCAAATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS TCA 72 bp GTGCCAGAAGGTCTGTCACTGTCACCGTGGTGTTGGTaGGTCCAAACTGTCGAGGGAGGAAGCGGACATTTG +
Preference number: 6 (lower is better)
Translates to: VPEGLSLSPWCW*VQTVEGGSGHL
Trigger: CAAATGTCCGCTTCCTCCCTCGACAGTTTGGACTCACCAACACCACGGTGACAGTGACAGACCTTCTGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336596.7
ENST00000452448.6
ENST00000494014.1
CDS CAA 72 bp GTATGTGCCAGAAGGTCTGTCACTGTCACCGTGGTGTaGGTGAGTCCAAACTGTCGAGGGAGGAAGCGGACA +
Preference number: 6 (lower is better)
Translates to: VCARRSVTVTVV*VSPNCRGRKRT
Trigger: TGTCCGCTTCCTCCCTCGACAGTTTGGACTCACCAACACCACGGTGACAGTGACAGACCTTCTGGCACATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336596.7
ENST00000452448.6
ENST00000494014.1
CDS TCA 72 bp GCAGTGAGAGGAGCATATCTCCATGAAGCATGCCACTaGTGTGAGGGGGAGCGCTCTGATTGCTGGAGAAGT +
Preference number: 6 (lower is better)
Translates to: AVRGAYLHEACH*CEGERSDCWRS
Trigger: ACTTCTCCAGCAATCAGAGCGCTCCCCCTCACATCAGTGGCATGCTTCATGGAGATATGCTCCTCTCACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS CCA 72 bp CTCCACCAGGGACTGGGAGTCCATGGGTACCGTGTCTaGAAACATAGCCAGATTCTTCACTGTAAATGGGCA +
Preference number: 6 (lower is better)
Translates to: LHQGLGVHGYRV*KHSQILHCKWA
Trigger: TGCCCATTTACAGTGAAGAATCTGGCTATGTTTCCAGACACGGTACCCATGGACTCCCAGTCCCTGGTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336596.7
ENST00000452448.6
ENST00000494014.1
CDS CCA 72 bp GGTGAGTCCAAACTGTCGAGGGAGGAAGCGGACATTTaGGCTGCATGGCTCACACTGTTTTATATTCCACCC +
Preference number: 6 (lower is better)
Translates to: GESKLSREEADI*AAWLTLFYIPP
Trigger: GGGTGGAATATAAAACAGTGTGAGCCATGCAGCCCAAATGTCCGCTTCCTCCCTCGACAGTTTGGACTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336596.7
ENST00000452448.6
ENST00000494014.1
CDS CAA 90 bp CTTGCGGCTGTTCGTCCCATATCCAGCGGCTGTTCGGGCTCGGATTaGGAATACGTATATAGTGTCAGGCTTGAGGCTACTGATGGTAAC +
Preference number: 6 (lower is better)
Translates to: LAAVRPISSGCSGSD*EYVYSVRLEATDGN
Trigger: GTTACCATCAGTAGCCTCAAGCCTGACACTATATACGTATTCCAAATCCGAGCCCGAACAGCCGCTGGATATGGGACGAACAGCCGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336596.7
ENST00000452448.6
ENST00000494014.1
CDS CAA 90 bp CCATTAAGCCAGTCACCTGTTGTGCGGAAGGTAGTGATATCCACATaGCTTTGGTCCAGAAGAAGGTTTGATGGCCTTGCGGCTGCACTG +
Preference number: 6 (lower is better)
Translates to: PLSQSPVVRKVVIST*LWSRRRFDGLAAAL
Trigger: CAGTGCAGCCGCAAGGCCATCAAACCTTCTTCTGGACCAAAGCAATGTGGATATCACTACCTTCCGCACAACAGGTGACTGGCTTAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS CCA 72 bp TTCGTCCCATATCCAGCGGCTGTTCGGGCTCGGATTTaGAATACGTATATAGTGTCAGGCTTGAGGCTACTG +
Preference number: 6 (lower is better)
Translates to: FVPYPAAVRARI*NTYIVSGLRLL
Trigger: CAGTAGCCTCAAGCCTGACACTATATACGTATTCCAAATCCGAGCCCGAACAGCCGCTGGATATGGGACGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336596.7
ENST00000452448.6
ENST00000494014.1
CDS CAA 72 bp GTTCGTCCCATATCCAGCGGCTGTTCGGGCTCGGATTaGGAATACGTATATAGTGTCAGGCTTGAGGCTACT +
Preference number: 6 (lower is better)
Translates to: VRPISSGCSGSD*EYVYSVRLEAT
Trigger: AGTAGCCTCAAGCCTGACACTATATACGTATTCCAAATCCGAGCCCGAACAGCCGCTGGATATGGGACGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336596.7
ENST00000452448.6
ENST00000494014.1
CDS CAA 90 bp GCGGCTGTTCGGGCTCGGATTTGGAATACGTATATAGTGTCAGGCTaGAGGCTACTGATGGTAACATTTGTGCCTCTTGCCCTCAGAATG +
Preference number: 6 (lower is better)
Translates to: AAVRARIWNTYIVSG*RLLMVTFVPLALRM
Trigger: CATTCTGAGGGCAAGAGGCACAAATGTTACCATCAGTAGCCTCAAGCCTGACACTATATACGTATTCCAAATCCGAGCCCGAACAGCCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336596.7
ENST00000452448.6
ENST00000494014.1
CDS GCA 72 bp AGGTCGGGTACAAGCCATGGATGGAGGGTCTTTGTCTaGCCGGAAGTAATTATTCTCACACCTGCAGTTCAT +
Preference number: 6 (lower is better)
Translates to: RSGTSHGWRVFV*PEVIILTPAVH
Trigger: ATGAACTGCAGGTGTGAGAATAATTACTTCCGGGCAGACAAAGACCCTCCATCCATGGCTTGTACCCGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336596.7
ENST00000452448.6
ENST00000494014.1
CDS CAA 72 bp ATGGAGAAAGAGTCTGGACTAGTTTCAAACTCAAACTaGCGGCTGTTCGTCCCATATCCAGCGGCTGTTCGG +
Preference number: 6 (lower is better)
Translates to: MEKESGLVSNSN*RLFVPYPAAVR
Trigger: CCGAACAGCCGCTGGATATGGGACGAACAGCCGCAAGTTTGAGTTTGAAACTAGTCCAGACTCTTTCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS CAA 72 bp CAGTCACCTGTTGTGCGGAAGGTAGTGATATCCACATaGCTTTGGTCCAGAAGAAGGTTTGATGGCCTTGCG +
Preference number: 6 (lower is better)
Translates to: QSPVVRKVVIST*LWSRRRFDGLA
Trigger: CGCAAGGCCATCAAACCTTCTTCTGGACCAAAGCAATGTGGATATCACTACCTTCCGCACAACAGGTGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336596.7
CDS CAA 90 bp GCTGCACTGGTGATGATCTTCAGGCTGCCGGGATTCCGGATAAGCTaGTCCAGAATACTAACAATCTGCTCAAACTTGGGTCTGTTGTTC +
Preference number: 6 (lower is better)
Translates to: AALVMIFRLPGFRIS*SRILTICSNLGLLF
Trigger: GAACAACAGACCCAAGTTTGAGCAGATTGTTAGTATTCTGGACAAGCTTATCCGGAATCCCGGCAGCCTGAAGATCATCACCAGTGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS TCA 72 bp TGCCCGGAAGTAATTATTCTCACACCTGCAGTTCATTaGACCATCTTCCTGAGTAGAACTGTGAGGCGGGCA +
Preference number: 6 (lower is better)
Translates to: CPEVIILTPAVH*TIFLSRTVRRA
Trigger: TGCCCGCCTCACAGTTCTACTCAGGAAGATGGTTCAATGAACTGCAGGTGTGAGAATAATTACTTCCGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336596.7
ENST00000452448.6
ENST00000494014.1
CDS GCA 72 bp AGGCGGGCACTTAGCACACTTCATATTACCATCCAATaGCTTGTAGAAACCTGGTCGACAAGCTTGGCACAT +
Preference number: 6 (lower is better)
Translates to: RRALSTLHITIQ*LVETWSTSLAH
Trigger: ATGTGCCAAGCTTGTCGACCAGGTTTCTACAAGGCATTGGATGGTAATATGAAGTGTGCTAAGTGCCCGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336596.7
ENST00000452448.6
ENST00000494014.1
CDS CCA 72 bp CATTTCTTGGTGAAGATGGAGGTCGGGTACAAGCCATaGATGGAGGGTCTTTGTCTGCCCGGAAGTAATTAT +
Preference number: 6 (lower is better)
Translates to: HFLVKMEVGYKP*MEGLCLPGSNY
Trigger: ATAATTACTTCCGGGCAGACAAAGACCCTCCATCCATGGCTTGTACCCGACCTCCATCTTCACCAAGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336596.7
ENST00000452448.6
ENST00000494014.1
CDS CCA 72 bp ATTGCTACTGCCGCTGAAATGGCGATCATGACCACTTaGCTACTTTCACCAGAGATGGAGAAAGAGTCTGGA +
Preference number: 6 (lower is better)
Translates to: IATAAEMAIMTT*LLSPEMEKESG
Trigger: TCCAGACTCTTTCTCCATCTCTGGTGAAAGTAGCCAAGTGGTCATGATCGCCATTTCAGCGGCAGTAGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS CAA 72 bp CGGGCTCGGATTTGGAATACGTATATAGTGTCAGGCTaGAGGCTACTGATGGTAACATTTGTGCCTCTTGCC +
Preference number: 6 (lower is better)
Translates to: RARIWNTYIVSG*RLLMVTFVPLA
Trigger: GGCAAGAGGCACAAATGTTACCATCAGTAGCCTCAAGCCTGACACTATATACGTATTCCAAATCCGAGCCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336596.7
ENST00000452448.6
ENST00000494014.1
CDS CAA 72 bp CATGTCACTGTTGTGCGGAAGGTAGTGATATCCACATaGCTTTGGTCCAGAAGAAGGTTTGATGGCCTTGCG +
Preference number: 6 (lower is better)
Translates to: HVTVVRKVVIST*LWSRRRFDGLA
Trigger: CGCAAGGCCATCAAACCTTCTTCTGGACCAAAGCAATGTGGATATCACTACCTTCCGCACAACAGTGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494014.1
CDS TCA 72 bp GATGACAACAGTGAGGAGAATAATTGCTACTGCCGCTaGAATGGCGATCATGACCACTTGGCTACTTTCACC +
Preference number: 6 (lower is better)
Translates to: DDNSEENNCYCR*NGDHDHLATFT
Trigger: GGTGAAAGTAGCCAAGTGGTCATGATCGCCATTTCAGCGGCAGTAGCAATTATTCTCCTCACTGTTGTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS GCA 72 bp GTTTTTGAATCCAGTAGATTGACTTCATTGGAAGGCTaGGGAATCAGTTCCCCGAAGCTGTCGAGAACAGAG +
Preference number: 6 (lower is better)
Translates to: VFESSRLTSLEG*GISSPKLSRTE
Trigger: CTCTGTTCTCGACAGCTTCGGGGAACTGATTCCGCAGCCTTCCAATGAAGTCAATCTACTGGATTCAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336596.7
ENST00000452448.6
ENST00000494014.1
CDS CAA 72 bp GTGATGATCTTCAGGCTGCCGGGATTCCGGATAAGCTaGTCCAGAATACTAACAATCTGCTCAAACTTGGGT +
Preference number: 6 (lower is better)
Translates to: VMIFRLPGFRIS*SRILTICSNLG
Trigger: ACCCAAGTTTGAGCAGATTGTTAGTATTCTGGACAAGCTTATCCGGAATCCCGGCAGCCTGAAGATCATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336596.7
ENST00000494014.1
CDS GCA 72 bp AGGCTTGAGGCTACTGATGGTAACATTTGTGCCTCTTaGCCTCAGAATGGTATAACTTGTTTCTTGTTCCTG +
Preference number: 6 (lower is better)
Translates to: RLEATDGNICAS*PQNGITCFLFL
Trigger: CAGGAACAAGAAACAAGTTATACCATTCTGAGGGCAAGAGGCACAAATGTTACCATCAGTAGCCTCAAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336596.7
ENST00000452448.6
ENST00000494014.1
CDS GCA 72 bp ACATCTTTTGCAAGATCCCTGCCCCCTCCTCTAGACTaGATTGAAATAATACATACAGTCTGGACTAGTTTC +
Preference number: 6 (lower is better)
Translates to: TSFARSLPPPLD*IEIIHTVWTSF
Trigger: GAAACTAGTCCAGACTGTATGTATTATTTCAATGCAGTCTAGAGGAGGGGGCAGGGATCTTGCAAAAGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000452448.6
CDS CCA 72 bp CGTGTCTGGAAACATAGCCAGATTCTTCACTGTAAATaGGCACTTTTTGAAGTATACTCTCACAGACACCAA +
Preference number: 6 (lower is better)
Translates to: RVWKHSQILHCK*ALFEVYSHRHQ
Trigger: TTGGTGTCTGTGAGAGTATACTTCAAAAAGTGCCCATTTACAGTGAAGAATCTGGCTATGTTTCCAGACACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336596.7
ENST00000452448.6
ENST00000494014.1
CDS CCA 72 bp ACACTTCATATTACCATCCAATGCCTTGTAGAAACCTaGTCGACAAGCTTGGCACATAAAACCTCTTTCTTC +
Preference number: 6 (lower is better)
Translates to: TLHITIQCLVET*STSLAHKTSFF
Trigger: GAAGAAAGAGGTTTTATGTGCCAAGCTTGTCGACCAGGTTTCTACAAGGCATTGGATGGTAATATGAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336596.7
ENST00000452448.6
ENST00000494014.1