RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPHA10 (Homo sapiens)

Ensembl gene IDs: ENSG00000183317

Ensembl transcript IDs: ENST00000319637.6, ENST00000373048.9, ENST00000427468.6, ENST00000432874.7, ENST00000437645.5, ENST00000444950.1, ENST00000446149.6, ENST00000453577.1, ENST00000525749.1, ENST00000534097.5, ENST00000540011.2

Found 777 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGCCAGTGTCCAGTCAGCCCCTGCCAAGGCACAGGGAGCTGAGGTaGATGCACCTCTGGCCCAGCCCCCGACGCCTGAGCCACCAGGCA +
Preference number: 1 (lower is better)
Translates to: WPVSSQPLPRHRELR*MHLWPSPRRLSHQA
Trigger: TGCCTGGTGGCTCAGGCGTCGGGGGCTGGGCCAGAGGTGCATCCACCTCAGCTCCCTGTGCCTTGGCAGGGGCTGACTGGACACTGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR CCA 90 bp CCAGGGCCTCCAGCCACGCGCCCACAGAGCCAAAGGAGGGGAAGGTaGAGAAGGCACGGTCCGCTAGTGGGGTGGGAGGCCTGGGTCCTT +
Preference number: 1 (lower is better)
Translates to: PGPPATRPQSQRRGR*RRHGPLVGWEAWVL
Trigger: AAGGACCCAGGCCTCCCACCCCACTAGCGGACCGTGCCTTCTCCACCTTCCCCTCCTTTGGCTCTGTGGGCGCGTGGCTGGAGGCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437645.5
3UTR GCA 90 bp CCAGATCTGGGCCCAAGCAGAGGAAGAGAGCGCTCCCTCCCACACTaGTGGAGCGCAGCTTGCCACGGTCCTTGGGCAGGGCTGGGGGAC +
Preference number: 1 (lower is better)
Translates to: PDLGPSRGRERSLPH*WSAACHGPWAGLGD
Trigger: GTCCCCCAGCCCTGCCCAAGGACCGTGGCAAGCTGCGCTCCAGCAGTGTGGGAGGGAGCGCTCTCTTCCTCTGCTTGGGCCCAGATCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR CCA 90 bp TCCCACACTGCTGGAGCGCAGCTTGCCACGGTCCTTGGGCAGGGCTaGGGGACTGGACCCCCACCGGAGTCCTGCCTTGGAAGAATGGGG +
Preference number: 1 (lower is better)
Translates to: SHTAGAQLATVLGQG*GTGPPPESCLGRMG
Trigger: CCCCATTCTTCCAAGGCAGGACTCCGGTGGGGGTCCAGTCCCCCAGCCCTGCCCAAGGACCGTGGCAAGCTGCGCTCCAGCAGTGTGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR TCA 90 bp CCCATAGCGCTGGGCTCCGGCCACCATAGTGGTGTAGACAGCCTCTaGTCGGTCCCGGGGGCCCCGCCCGAAGCCAGAGATCTTGCAGAC +
Preference number: 1 (lower is better)
Translates to: PIALGSGHHSGVDSL*SVPGAPPEARDLAD
Trigger: GTCTGCAAGATCTCTGGCTTCGGGCGGGGCCCCCGGGACCGATCAGAGGCTGTCTACACCACTATGGTGGCCGGAGCCCAGCGCTATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432874.7
3UTR TCA 90 bp AAACTGGCCCAGCGTGAGGGCCTCGGCCAGGAAGCCGAGCCTCTGTaGGTCGGAGGCGCTGTCCCTCAGCATATGCACGGCTACGAGCAG +
Preference number: 1 (lower is better)
Translates to: KLAQREGLGQEAEPL*VGGAVPQHMHGYEQ
Trigger: CTGCTCGTAGCCGTGCATATGCTGAGGGACAGCGCCTCCGACTCACAGAGGCTCGGCTTCCTGGCCGAGGCCCTCACGCTGGGCCAGTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437645.5
3UTR GCA 90 bp AGGAAGCCGAGCCTCTGTGAGTCGGAGGCGCTGTCCCTCAGCATATaGACGGCTACGAGCAGCTCCTGGCGACCGGGGAGCTGCAAGCAG +
Preference number: 1 (lower is better)
Translates to: RKPSLCESEALSLSI*TATSSSWRPGSCKQ
Trigger: CTGCTTGCAGCTCCCCGGTCGCCAGGAGCTGCTCGTAGCCGTGCATATGCTGAGGGACAGCGCCTCCGACTCACAGAGGCTCGGCTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437645.5
3UTR CCA 90 bp CAGGGAGCACCAGGGCCTCTCATGGCCCGGCCTGGCCAGGACTTTTaGCCTCACCCTGAACTGTCAGCCCAAGGCAGGGGGACACAGAAA +
Preference number: 1 (lower is better)
Translates to: QGAPGPLMARPGQDF*PHPELSAQGRGTQK
Trigger: TTTCTGTGTCCCCCTGCCTTGGGCTGACAGTTCAGGGTGAGGCCAAAAGTCCTGGCCAGGCCGGGCCATGAGAGGCCCTGGTGCTCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR CCA 90 bp GCCCTGCTGAGATCCAGCTGCCTTCCTGCCACCCTACGAAAGCTCTaGCATACTGGGCCCCACCATTCCCGGGGGCCCTTGTGGATAAGG +
Preference number: 1 (lower is better)
Translates to: ALLRSSCLPATLRKL*HTGPHHSRGPLWIR
Trigger: CCTTATCCACAAGGGCCCCCGGGAATGGTGGGGCCCAGTATGCCAGAGCTTTCGTAGGGTGGCAGGAAGGCAGCTGGATCTCAGCAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR CCA 90 bp CCAGAGAGCCATCGCCCCACATCACATCTGTGCAGGGCTGAGGCCTaGGACCCAACAGGATTCTGGGACCTCACTCCTCAGTGGAGGGGA +
Preference number: 1 (lower is better)
Translates to: PESHRPTSHLCRAEA*DPTGFWDLTPQWRG
Trigger: TCCCCTCCACTGAGGAGTGAGGTCCCAGAATCCTGTTGGGTCCCAGGCCTCAGCCCTGCACAGATGTGATGTGGGGCGATGGCTCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR TCA 90 bp AGGGTTCCCAGAGAGCCATCGCCCCACATCACATCTGTGCAGGGCTaGGGCCTGGGACCCAACAGGATTCTGGGACCTCACTCCTCAGTG +
Preference number: 1 (lower is better)
Translates to: RVPREPSPHITSVQG*GLGPNRILGPHSSV
Trigger: CACTGAGGAGTGAGGTCCCAGAATCCTGTTGGGTCCCAGGCCTCAGCCCTGCACAGATGTGATGTGGGGCGATGGCTCTCTGGGAACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR GCA 90 bp GGAGTCGCCTCTAGAGTCCCCAAGGGCTGTACAGGGAAGTGGTGGTaGCATAGGGCAGGACCAAGGACTCTCTCCCCAGAGCCAGCCTTA +
Preference number: 1 (lower is better)
Translates to: GVASRVPKGCTGKWW*HRAGPRTLSPEPAL
Trigger: TAAGGCTGGCTCTGGGGAGAGAGTCCTTGGTCCTGCCCTATGGCACCACCACTTCCCTGTACAGCCCTTGGGGACTCTAGAGGCGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR CCA 90 bp CGAAAGCTCTGGCATACTGGGCCCCACCATTCCCGGGGGCCCTTGTaGATAAGGAACTCCACGGTGGGCTCAGCACAACCACTTCTGCCA +
Preference number: 1 (lower is better)
Translates to: RKLWHTGPHHSRGPL*IRNSTVGSAQPLLP
Trigger: TGGCAGAAGTGGTTGTGCTGAGCCCACCGTGGAGTTCCTTATCCACAAGGGCCCCCGGGAATGGTGGGGCCCAGTATGCCAGAGCTTTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR CCA 90 bp GAGATCCAGCTGCCTTCCTGCCACCCTACGAAAGCTCTGGCATACTaGGCCCCACCATTCCCGGGGGCCCTTGTGGATAAGGAACTCCAC +
Preference number: 1 (lower is better)
Translates to: EIQLPSCHPTKALAY*APPFPGALVDKELH
Trigger: GTGGAGTTCCTTATCCACAAGGGCCCCCGGGAATGGTGGGGCCCAGTATGCCAGAGCTTTCGTAGGGTGGCAGGAAGGCAGCTGGATCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR CCA 90 bp GCTGAGGCCTGGGACCCAACAGGATTCTGGGACCTCACTCCTCAGTaGAGGGGAGATCTACCCTGGACACCGAAGTCCTGCCAACACAGC +
Preference number: 1 (lower is better)
Translates to: AEAWDPTGFWDLTPQ*RGDLPWTPKSCQHS
Trigger: GCTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGATCTCCCCTCCACTGAGGAGTGAGGTCCCAGAATCCTGTTGGGTCCCAGGCCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR CCA 90 bp GCAGGACCAAGGACTCTCTCCCCAGAGCCAGCCTTACCCCTGGATTaGGTTCTGACCTCAGCTCTGCTCCTGACTCCTCACTTGGCCTCA +
Preference number: 1 (lower is better)
Translates to: AGPRTLSPEPALPLD*VLTSALLLTPHLAS
Trigger: TGAGGCCAAGTGAGGAGTCAGGAGCAGAGCTGAGGTCAGAACCCAATCCAGGGGTAAGGCTGGCTCTGGGGAGAGAGTCCTTGGTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR CCA 90 bp ACAGGATTCTGGGACCTCACTCCTCAGTGGAGGGGAGATCTACCCTaGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGA +
Preference number: 1 (lower is better)
Translates to: TGFWDLTPQWRGDLP*TPKSCQHSQGPFCR
Trigger: TCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGATCTCCCCTCCACTGAGGAGTGAGGTCCCAGAATCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR TCA 90 bp CACAGAAACCAGATCCTGAGTCTAGGGCTCTTGGGTATCAGCCCCTaGGCTCAGCACCATCTTTGCCTGCCTGAGCCTTGGCCAGTGTCC +
Preference number: 1 (lower is better)
Translates to: HRNQILSLGLLGISP*AQHHLCLPEPWPVS
Trigger: GGACACTGGCCAAGGCTCAGGCAGGCAAAGATGGTGCTGAGCTCAGGGGCTGATACCCAAGAGCCCTAGACTCAGGATCTGGTTTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR CCA 90 bp GCACCTTCCCGCCTCTGGGCTCTTTCTCATGCTAGCCTCTCTGCATaGACTCCTTTTGTCCGAGGCCTGCCATCTTGCCTGCCGAAAACT +
Preference number: 1 (lower is better)
Translates to: APSRLWALSHASLSA*TPFVRGLPSCLPKT
Trigger: AGTTTTCGGCAGGCAAGATGGCAGGCCTCGGACAAAAGGAGTCCATGCAGAGAGGCTAGCATGAGAAAGAGCCCAGAGGCGGGAAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR CCA 90 bp CCACCTCTGGGTGCTCTGCAAAGAGGCACTGCACCTTCCCGCCTCTaGGCTCTTTCTCATGCTAGCCTCTCTGCATGGACTCCTTTTGTC +
Preference number: 1 (lower is better)
Translates to: PPLGALQRGTAPSRL*ALSHASLSAWTPFV
Trigger: GACAAAAGGAGTCCATGCAGAGAGGCTAGCATGAGAAAGAGCCCAGAGGCGGGAAGGTGCAGTGCCTCTTTGCAGAGCACCCAGAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR CCA 90 bp GGGACAGTAAATCCCTCTATGCAGAGAGATCTCAGACGCAGATTCTaGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACAC +
Preference number: 1 (lower is better)
Translates to: GTVNPSMQRDLRRRF*TPLSSRKGAEALPH
Trigger: GTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCCAGAATCTGCGTCTGAGATCTCTCTGCATAGAGGGATTTACTGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
3UTR TCA 90 bp GTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATaGTCAAGCAACTGCCACTCAAAGAGGCACCATATCACAGACAAG +
Preference number: 1 (lower is better)
Translates to: VLEEGGRSPSTPAIQ*SSNCHSKRHHITDK
Trigger: CTTGTCTGTGATATGGTGCCTCTTTGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
3UTR CCA 90 bp CAACCTTGCGCACATCTTGATCTTGGCTTCCAGCCTCCAGAGCTGTaGGACAGTAAATCCCTCTATGCAGAGAGATCTCAGACGCAGATT +
Preference number: 1 (lower is better)
Translates to: QPCAHLDLGFQPPEL*DSKSLYAERSQTQI
Trigger: AATCTGCGTCTGAGATCTCTCTGCATAGAGGGATTTACTGTCCCACAGCTCTGGAGGCTGGAAGCCAAGATCAAGATGTGCGCAAGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
3UTR CCA 90 bp TTAGCCAGTCAATTTCATCTAGTAAGTTCACTCATTGGCCCTGACTaGACTCACTGGAAACTCCACAAGACTTCAGGGCTCTCCTTGGGC +
Preference number: 1 (lower is better)
Translates to: LASQFHLVSSLIGPD*THWKLHKTSGLSLG
Trigger: GCCCAAGGAGAGCCCTGAAGTCTTGTGGAGTTTCCAGTGAGTCCAGTCAGGGCCAATGAGTGAACTTACTAGATGAAATTGACTGGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319637.6
3UTR TCA 90 bp CTCCTTAGCCAGTCAATTTCATCTAGTAAGTTCACTCATTGGCCCTaGCTGGACTCACTGGAAACTCCACAAGACTTCAGGGCTCTCCTT +
Preference number: 1 (lower is better)
Translates to: LLSQSISSSKFTHWP*LDSLETPQDFRALL
Trigger: AAGGAGAGCCCTGAAGTCTTGTGGAGTTTCCAGTGAGTCCAGTCAGGGCCAATGAGTGAACTTACTAGATGAAATTGACTGGCTAAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319637.6
3UTR TCA 90 bp AGAAACTTGGTAAGCAACATTCTCCAGTTAGCCTTATCAAAGAGCTaGTATTTTGCTCTCCACAGAGGGAAGATGATGCGAAGAGAGAGT +
Preference number: 1 (lower is better)
Translates to: RNLVSNILQLALSKS*YFALHRGKMMRRES
Trigger: ACTCTCTCTTCGCATCATCTTCCCTCTGTGGAGAGCAAAATATCAGCTCTTTGATAAGGCTAACTGGAGAATGTTGCTTACCAAGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000534097.5
3UTR TCA 90 bp AACTGGGATGCATCTTTCAGTTGGATGGCACAACATAGTTGGCTGTaGTGTTTCTTTCTTGGTAGGACATCTTACACTCAATGGCATCTT +
Preference number: 1 (lower is better)
Translates to: NWDASFSWMAQHSWL*CFFLGRTSYTQWHL
Trigger: AAGATGCCATTGAGTGTAAGATGTCCTACCAAGAAAGAAACATCACAGCCAACTATGTTGTGCCATCCAACTGAAAGATGCATCCCAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000534097.5
3UTR TCA 90 bp AACTGGGATGCATCTTTCAGTTGGATGGCACAACATAGTTGGCTGTaGTGTTTCTTTCTTGGTAGGACATCTTACACTCAATGGCATAGA +
Preference number: 1 (lower is better)
Translates to: NWDASFSWMAQHSWL*CFFLGRTSYTQWHR
Trigger: TCTATGCCATTGAGTGTAAGATGTCCTACCAAGAAAGAAACATCACAGCCAACTATGTTGTGCCATCCAACTGAAAGATGCATCCCAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437645.5
3UTR-3UTR TCA 90 bp CACCAGGTCCTGGGCAGTCATCTCGGCCACGGCCTCCAGGCTCCCATAGCCAGCGGTGTAGACAGCCTCTaGTCGGTCCCGGGGGCCCCG +
Preference number: 2 (lower is better)
Translates to: HQVLGSHLGHGLQAPIASGVDSL*SVPGAP
Trigger: CGGGGCCCCCGGGACCGATCAGAGGCTGTCTACACC...GCTGGCTATGGGAGCCTGGAGGCCGTGGCCGAGATGACTGCCCAGGACCTGGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000437645.5
3UTR CAA 90 bp ACAGCCTCTGATCGGTCCCGGGGGCCCCGCCCGAAGCCAGAGATCTaGCAGACAAGGTCGCTGCTGACCAGCACATGGCGAGCTGCCAGG +
Preference number: 2 (lower is better)
Translates to: TASDRSRGPRPKPEI*QTRSLLTSTWRAAR
Trigger: CCTGGCAGCTCGCCATGTGCTGGTCAGCAGCGACCTTGTCTGCAAGATCTCTGGCTTCGGGCGGGGCCCCCGGGACCGATCAGAGGCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000437645.5
3UTR-3UTR CCA 90 bp CTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTGGCAGGGCTGGGGGACTaGACCCCCACCGGAGTCCTG +
Preference number: 2 (lower is better)
Translates to: LDTEVLPTQPGALLQKQLAGLGD*TPTGVL
Trigger: CAGGACTCCGGTGGGGGTCCAGTCCCCCAGCCCTGC...CAGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR GCA 90 bp CCATTCCCGGGGGCCCTTGTGGATAAGGAACTCCACGGTGGGCTCAGCACAACCCGCTCCCTCCCACACTaGTGGAGCGCAGCTTGCCAC +
Preference number: 2 (lower is better)
Translates to: PFPGALVDKELHGGLSTTRSLPH*WSAACH
Trigger: GTGGCAAGCTGCGCTCCAGCAGTGTGGGAGGGAGCG...GGTTGTGCTGAGCCCACCGTGGAGTTCCTTATCCACAAGGGCCCCCGGGAATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR GCA 90 bp GCCAGAGATCTTGCAGACAAGGTCGCTGCTGACCAGCACATGGCGAGCTGCCAGACCAGCTGCCCCTCGTaGCGCCTGAGGAAGCCGTCC +
Preference number: 2 (lower is better)
Translates to: ARDLADKVAADQHMASCQTSCPS*RLRKPS
Trigger: GGACGGCTTCCTCAGGCGGCACGAGGGGCAGCTGGT...CTGGCAGCTCGCCATGTGCTGGTCAGCAGCGACCTTGTCTGCAAGATCTCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000437645.5
3UTR-3UTR CCA 90 bp CTGATCGGTCCCGGGGGCCCCGCCCGAAGCCAGAGATCTTGCAGACAAGGTCGCTCCAGCCGCACGATGTaGCTATGGTCAAACTGGCCC +
Preference number: 2 (lower is better)
Translates to: LIGPGGPARSQRSCRQGRSSRTM*LWSNWP
Trigger: GGGCCAGTTTGACCATAGCCACATCGTGCGGCTGGA...GCGACCTTGTCTGCAAGATCTCTGGCTTCGGGCGGGGCCCCCGGGACCGATCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437645.5
3UTR-3UTR TCA 90 bp CTGCCATCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTCCAGCCCCCGACGCCTaGGCCACCAGGCAGCTGCAG +
Preference number: 2 (lower is better)
Translates to: LPSCLPKTPPTPRKEPSLPAPDA*ATRQLQ
Trigger: CTGCAGCTGCCTGGTGGCTCAGGCGTCGGGGGCTGG...AAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGATGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CCA 90 bp TGCAGGGCGCTGATCCCGCTGAGGAGGGCCTCTCGATGTTCAGCCAAAGAGATGGCTACGAGCAGCTCCTaGCGACCGGGGAGCTGCAAG +
Preference number: 2 (lower is better)
Translates to: CRALIPLRRASRCSAKEMATSSS*RPGSCK
Trigger: CTTGCAGCTCCCCGGTCGCCAGGAGCTGCTCGTAGC...CATCTCTTTGGCTGAACATCGAGAGGCCCTCCTCAGCGGGATCAGCGCCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437645.5
3UTR-3UTR TCA 90 bp CCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTCCCTGTGGGGGAGGGGCAGGCAGTaGAAGCGGGGAAGCTGTGGC +
Preference number: 2 (lower is better)
Translates to: PSRADKCHGRPKQTQSLWGRGRQ*KRGSCG
Trigger: GCCACAGCTTCCCCGCTTTCACTGCCTGCCCCTCCC...CCACAGGGACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR TCA 90 bp GGCTCCCATAGCCAGCAGCCGCGAAGCTGTCCTTGTAGCGGCACAGGTCCAGGGCATCCTCCACAGCCTTaGTCACGTCTTGGCCAGACA +
Preference number: 2 (lower is better)
Translates to: GSHSQQPRSCPCSGTGPGHPPQP*SRLGQT
Trigger: TGTCTGGCCAAGACGTGATCAAGGCTGTGGAGGATG...CCCTGGACCTGTGCCGCTACAAGGACAGCTTCGCGGCTGCTGGCTATGGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000437645.5
3UTR-3UTR CCA 90 bp CCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTAGGCACGGAGCTGGCTaGAGGGGAGTCGCCTCTAGA +
Preference number: 2 (lower is better)
Translates to: PGHRSPANTARGPSAETARHGAG*RGVASR
Trigger: TCTAGAGGCGACTCCCCTCCAGCCAGCTCCGTGCCT...AGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CCA 90 bp CTGGGCCTCCCAGGATGGCCCCGGGGAAGCGGCCCGGATCTGAAAGACGTAGCGCCCCTGTCTTCACCATaGAGTAAGTCTGCTCACTCT +
Preference number: 2 (lower is better)
Translates to: LGLPGWPRGSGPDLKDVAPLSSP*SKSAHS
Trigger: AGAGTGAGCAGACTTACTCCATGGTGAAGACAGGGG...CGCTACGTCTTTCAGATCCGGGCCGCTTCCCCGGGGCCATCCTGGGAGGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525749.1
3UTR CAA 90 bp GGCAGGACCAAGGACTCTCTCCCCAGAGCCAGCCTTACCCCTGGATaGGGTTCTGACCTCAGCTCTGCTCCTGACTCCTCACTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: GRTKDSLPRASLTPG*GSDLSSAPDSSLGL
Trigger: GAGGCCAAGTGAGGAGTCAGGAGCAGAGCTGAGGTCAGAACCCAATCCAGGGGTAAGGCTGGCTCTGGGGAGAGAGTCCTTGGTCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR GCA 90 bp CTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTGTCCCCCACCTCTGGGTaGTCTGCAAAGAGGCACTGC +
Preference number: 2 (lower is better)
Translates to: LDTEVLPTQPGALLQKQLSPTSG*SAKRHC
Trigger: GCAGTGCCTCTTTGCAGAGCACCCAGAGGTGGGGGA...CAGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CCA 90 bp CTGCCATCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTCACCAGGGCCTCTCATaGCCCGGCCTGGCCAGGACT +
Preference number: 2 (lower is better)
Translates to: LPSCLPKTPPTPRKEPSLHQGLS*PGLART
Trigger: AGTCCTGGCCAGGCCGGGCCATGAGAGGCCCTGGTG...AAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGATGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CCA 90 bp TCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTTCCCACCCCAAGGCACGGAGCTaGCTGGAGGGGAGTCGCCTC +
Preference number: 2 (lower is better)
Translates to: SCLPKTPPTPRKEPSLSHPKARS*LEGSRL
Trigger: GAGGCGACTCCCCTCCAGCCAGCTCCGTGCCTTGGG...GTGGGAAAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR CAA 90 bp CTACGAAAGCTCTGGCATACTGGGCCCCACCATTCCCGGGGGCCCTaGTGGATAAGGAACTCCACGGTGGGCTCAGCACAACCACTTCTG +
Preference number: 2 (lower is better)
Translates to: LRKLWHTGPHHSRGP*WIRNSTVGSAQPLL
Trigger: CAGAAGTGGTTGTGCTGAGCCCACCGTGGAGTTCCTTATCCACAAGGGCCCCCGGGAATGGTGGGGCCCAGTATGCCAGAGCTTTCGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR TCA 90 bp ACCCTACGAAAGCTCTGGCATACTGGGCCCCACCATTCCCGGGGGCCCTTGTGGTCTTTTCAGGGGCACTaGGTTAGCCAAGGCGTTCAG +
Preference number: 2 (lower is better)
Translates to: TLRKLWHTGPHHSRGPLWSFQGH*VSQGVQ
Trigger: CTGAACGCCTTGGCTAACTCAGTGCCCCTGAAAAGA...CCACAAGGGCCCCCGGGAATGGTGGGGCCCAGTATGCCAGAGCTTTCGTAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR TCA 90 bp GAGATCTTGCAGACAAGGTCGCTGCTGACCAGCACATGGCGAGCTGCCAGGCCCGGCCTGTCTCCTCTGTaGAATGGGGATTCCTCTCTG +
Preference number: 2 (lower is better)
Translates to: EILQTRSLLTSTWRAARPGLSPL*NGDSSL
Trigger: CAGAGAGGAATCCCCATTTCACAGAGGAGACAGGCC...GGGCCTGGCAGCTCGCCATGTGCTGGTCAGCAGCGACCTTGTCTGCAAGATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437645.5
3UTR-3UTR GCA 90 bp CACTCCTCAGTGGAGGGGAGATCTACCCTGGACACCGAAGTCCTGCCAACACAGCCACCCAAGAAGGGATaGTGGTCCAGGCTTCCCAGG +
Preference number: 2 (lower is better)
Translates to: HSSVEGRSTLDTEVLPTQPPKKG*WSRLPR
Trigger: CCTGGGAAGCCTGGACCAGCATCCCTTCTTGGGTGG...CTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGATCTCCCCTCCACTGAGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CCA 90 bp ACACACAGCCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTGCTTGCCACGGTCCTTaGGCAGGGCTGGGGGACTGG +
Preference number: 2 (lower is better)
Translates to: THSQAEQTSVTGGLNKLSACHGP*AGLGDW
Trigger: CCAGTCCCCCAGCCCTGCCCAAGGACCGTGGCAAGC...ACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGGCTGTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CCA 90 bp ACACACAGCCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTAGGTGGATGCACCTCTaGCCCAGCCCCCGACGCCTG +
Preference number: 2 (lower is better)
Translates to: THSQAEQTSVTGGLNKLSRWMHL*PSPRRL
Trigger: CAGGCGTCGGGGGCTGGGCCAGAGGTGCATCCACCT...ACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGGCTGTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CCA 90 bp ATCTACCCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAAAAGCTCTGGCATACTaGGCCCCACCATTCCCGGGG +
Preference number: 2 (lower is better)
Translates to: IYPGHRSPANTARGPSAEKALAY*APPFPG
Trigger: CCCCGGGAATGGTGGGGCCCAGTATGCCAGAGCTTT...TTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CCA 90 bp CCGCTGAGGAGGGCCTCTCGATGTTCAGCCAAAGAGATGCCTAGGCTCACCAGGCTCAGACGCAGATTCTaGACACCCCTGTCCTCGAGG +
Preference number: 2 (lower is better)
Translates to: PLRRASRCSAKEMPRLTRLRRRF*TPLSSR
Trigger: CCTCGAGGACAGGGGTGTCCAGAATCTGCGTCTGAG...CCTGGTGAGCCTAGGCATCTCTTTGGCTGAACATCGAGAGGCCCTCCTCAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
3UTR-3UTR CCA 90 bp GGAAACAACCTTGCGCACATCTTGATCTTGGCTTCCAGCCTCCAGAGCTGTGGGGTGGGGTGGGAGGCCTaGGTCCTTCTGCCAGCAGTC +
Preference number: 2 (lower is better)
Translates to: GNNLAHILILASSLQSCGVGWEA*VLLPAV
Trigger: GACTGCTGGCAGAAGGACCCAGGCCTCCCACCCCAC...CCCACAGCTCTGGAGGCTGGAAGCCAAGATCAAGATGTGCGCAAGGTTGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437645.5
3UTR CAA 90 bp GCCTCTGGGCTCTTTCTCATGCTAGCCTCTCTGCATGGACTCCTTTaGTCCGAGGCCTGCCATCTTGCCTGCCGAAAACTCCACCCACCC +
Preference number: 2 (lower is better)
Translates to: ASGLFLMLASLHGLL*SEACHLACRKLHPP
Trigger: GGGTGGGTGGAGTTTTCGGCAGGCAAGATGGCAGGCCTCGGACAAAAGGAGTCCATGCAGAGAGGCTAGCATGAGAAAGAGCCCAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR TCA 90 bp GCCCAAGGCAGGGGGACACAGAAACCAGATCCTGAGTCTAGGGCTCTTGGGTATCCATCTTTGCCTGCCTaGGCCTTGGCCAGTGTCCAG +
Preference number: 2 (lower is better)
Translates to: AQGRGTQKPDPESRALGYPSLPA*ALASVQ
Trigger: CTGGACACTGGCCAAGGCTCAGGCAGGCAAAGATGG...ATACCCAAGAGCCCTAGACTCAGGATCTGGTTTCTGTGTCCCCCTGCCTTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR TCA 90 bp TCTGGGCTCTTTCTCATGCTAGCCTCTCTGCATGGACTCCTTTTGTCCGAGGCCTCCCTGTGGCCCTGCTaGGATCCAGCTGCCTTCCTG +
Preference number: 2 (lower is better)
Translates to: SGLFLMLASLHGLLLSEASLWPC*DPAAFL
Trigger: CAGGAAGGCAGCTGGATCTCAGCAGGGCCACAGGGA...GGCCTCGGACAAAAGGAGTCCATGCAGAGAGGCTAGCATGAGAAAGAGCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR TCA 90 bp GGTCCAGGGCCTCCAGCCACGCGCCCACAGAGCCAAAGGAGGGGAAGGTGGAGAACACCAGCTATACAATaGTCAAGCAACTGCCACTCA +
Preference number: 2 (lower is better)
Translates to: GPGPPATRPQSQRRGRWRTPAIQ*SSNCHS
Trigger: TGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGT...TCTCCACCTTCCCCTCCTTTGGCTCTGTGGGCGCGTGGCTGGAGGCCCTGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
3UTR-3UTR GCA 90 bp TCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTTCCCACCCCCCACCGGAGTCCTaGCTTGGAAGAATGGGGTCC +
Preference number: 2 (lower is better)
Translates to: SCLPKTPPTPRKEPSLSHPPPES*LGRMGS
Trigger: GGACCCCATTCTTCCAAGGCAGGACTCCGGTGGGGG...GTGGGAAAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR GCA 90 bp CACTCCTCAGTGGAGGGGAGATCTACCCTGGACACCGAAGTCCTGCCAACACAGGAGCCACCAGGCAGCTaGAGTCACTGCCAGGTAGAA +
Preference number: 2 (lower is better)
Translates to: HSSVEGRSTLDTEVLPTQEPPGS*SHCQVE
Trigger: TTCTACCTGGCAGTGACTGCAGCTGCCTGGTGGCTC...CTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGATCTCCCCTCCACTGAGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CCA 90 bp TCTGGGCTCTTTCTCATGCTAGCCTCTCTGCATGGACTCCTTTTGTCCGAGGCCTCCCTCCCACACTGCTaGAGCGCAGCTTGCCACGGT +
Preference number: 2 (lower is better)
Translates to: SGLFLMLASLHGLLLSEASLPHC*SAACHG
Trigger: ACCGTGGCAAGCTGCGCTCCAGCAGTGTGGGAGGGA...GGCCTCGGACAAAAGGAGTCCATGCAGAGAGGCTAGCATGAGAAAGAGCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CCA 90 bp TCTGGGCTCTTTCTCATGCTAGCCTCTCTGCATGGACTCCTTTTGTCCGAGGCCGGCCCCAGCCCCCAGTaGGTACAAATGGCAGTAGGG +
Preference number: 2 (lower is better)
Translates to: SGLFLMLASLHGLLLSEAGPSPQ*VQMAVG
Trigger: CCCTACTGCCATTTGTACCCACTGGGGGCTGGGGCC...GGCCTCGGACAAAAGGAGTCCATGCAGAGAGGCTAGCATGAGAAAGAGCCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CCA 90 bp TCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTTCCCACGGCTCCATGGAAGGCTaGGTAGTGCCCAAGGCACGG +
Preference number: 2 (lower is better)
Translates to: SCLPKTPPTPRKEPSLSHGSMEG*VVPKAR
Trigger: CCGTGCCTTGGGCACTACCCAGCCTTCCATGGAGCC...GTGGGAAAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR TCA 90 bp GCCCAAGGCAGGGGGACACAGAAACCAGATCCTGAGTCTAGGGCTCTTGGGTATAGGCGTTCAGACTCGTaGAAATGGGAGGGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: AQGRGTQKPDPESRALGYRRSDS*KWEGQA
Trigger: TGCCTGCCCCTCCCATTTTCACGAGTCTGAACGCCT...ATACCCAAGAGCCCTAGACTCAGGATCTGGTTTCTGTGTCCCCCTGCCTTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR TCA 90 bp ACACACAGCCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTCAAGGCACAGGGAGCTaGGGTGGATGCACCTCTGGC +
Preference number: 2 (lower is better)
Translates to: THSQAEQTSVTGGLNKLSQGTGS*GGCTSG
Trigger: GCCAGAGGTGCATCCACCTCAGCTCCCTGTGCCTTG...ACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGGCTGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR TCA 90 bp ATCTACCCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAATTGGGTATCAGCCCCTaGGCTCAGCACCATCTTTGC +
Preference number: 2 (lower is better)
Translates to: IYPGHRSPANTARGPSAELGISP*AQHHLC
Trigger: GCAAAGATGGTGCTGAGCTCAGGGGCTGATACCCAA...TTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR TCA 90 bp CTGCCATCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTCCTCAGCTCTGCTCCTaGCTCCTCACTTGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: LPSCLPKTPPTPRKEPSLPQLCS*LLTWPQ
Trigger: CTGAGGCCAAGTGAGGAGTCAGGAGCAGAGCTGAGG...AAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGATGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR TCA 90 bp AGGAGGGCCTCTCGATGTTCAGCCAAAGAGATGCCTAGGCTCACCAGGTCCTGGAGCACTGTGCATTCGTaGAGAAGCGAGGGCTTCAGG +
Preference number: 2 (lower is better)
Translates to: RRASRCSAKEMPRLTRSWSTVHS*RSEGFR
Trigger: CCTGAAGCCCTCGCTTCTTCACGAATGCACAGTGCT...CCAGGACCTGGTGAGCCTAGGCATCTCTTTGGCTGAACATCGAGAGGCCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432874.7
3UTR-3UTR GCA 90 bp CTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTGCCCCGAATTTCCTCCTaGTGTTATCTCAGGGGTCCT +
Preference number: 2 (lower is better)
Translates to: LDTEVLPTQPGALLQKQLPRISS*CYLRGP
Trigger: AGGACCCCTGAGATAACAGCAGGAGGAAATTCGGGG...CAGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR GCA 90 bp ATCTACCCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAAGCACCATCTTTGCCTaGCTGAGCCTTGGCCAGTGT +
Preference number: 2 (lower is better)
Translates to: IYPGHRSPANTARGPSAESTIFA*LSLGQC
Trigger: ACACTGGCCAAGGCTCAGGCAGGCAAAGATGGTGCT...TTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR GCA 90 bp GCCCAAGGCAGGGGGACACAGAAACCAGATCCTGAGTCTAGGGCTCTTGGGTATGCTCAGCACCATCTTTaGCTGCCTGAGCCTTGGCCA +
Preference number: 2 (lower is better)
Translates to: AQGRGTQKPDPESRALGYAQHHL*LPEPWP
Trigger: TGGCCAAGGCTCAGGCAGGCAAAGATGGTGCTGAGC...ATACCCAAGAGCCCTAGACTCAGGATCTGGTTTCTGTGTCCCCCTGCCTTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR GCA 90 bp CCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTCCCTGTGGACAGGGAAGTGGTGGTaGCATAGGGCAGGACCAAGG +
Preference number: 2 (lower is better)
Translates to: PSRADKCHGRPKQTQSLWTGKWW*HRAGPR
Trigger: CCTTGGTCCTGCCCTATGGCACCACCACTTCCCTGT...CCACAGGGACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR GCA 90 bp CCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTCCCTGTGGCTGCTGAGATCCAGCTaGCTTCCTGCCACCCTACGA +
Preference number: 2 (lower is better)
Translates to: PSRADKCHGRPKQTQSLWLLRSS*LPATLR
Trigger: TCGTAGGGTGGCAGGAAGGCAGCTGGATCTCAGCAG...CCACAGGGACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR GCA 90 bp CTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTGGGGCACTGTGGATGGTaGCCTGGAATTACTTCTTGG +
Preference number: 2 (lower is better)
Translates to: LDTEVLPTQPGALLQKQLGHCGW*PGITSW
Trigger: CCAAGAAGTAATTCCAGGGCACCATCCACAGTGCCC...CAGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CCA 90 bp ATAAGGAACTCCACGGTGGGCTCAGCACAACCACTTCTGCCAGGGCTCTTCAAAAAAGCGGGGAAGCTGTaGCCCCACCAGATCTGGGCC +
Preference number: 2 (lower is better)
Translates to: IRNSTVGSAQPLLPGLFKKAGKL*PHQIWA
Trigger: GGCCCAGATCTGGTGGGGCCACAGCTTCCCCGCTTT...TTTGAAGAGCCCTGGCAGAAGTGGTTGTGCTGAGCCCACCGTGGAGTTCCTTAT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CCA 90 bp ATCTACCCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAACCCACGCTGTCTGACTaGTCAATGGGTCTGTGGGAA +
Preference number: 2 (lower is better)
Translates to: IYPGHRSPANTARGPSAEPTLSD*SMGLWE
Trigger: TTCCCACAGACCCATTGACCAGTCAGACAGCGTGGG...TTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CCA 90 bp ATAAGGAACTCCACGGTGGGCTCAGCACAACCACTTCTGCCAGGGCTCTTCAAACACAGGGAGCTGAGGTaGATGCACCTCTGGCCCAGC +
Preference number: 2 (lower is better)
Translates to: IRNSTVGSAQPLLPGLFKHRELR*MHLWPS
Trigger: GCTGGGCCAGAGGTGCATCCACCTCAGCTCCCTGTG...TTTGAAGAGCCCTGGCAGAAGTGGTTGTGCTGAGCCCACCGTGGAGTTCCTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CCA 90 bp CTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTGAAGCTCTTGGGTCCCTaGGGAGATAACATGGCCCTT +
Preference number: 2 (lower is better)
Translates to: LDTEVLPTQPGALLQKQLKLLGP*GDNMAL
Trigger: AAGGGCCATGTTATCTCCCCAGGGACCCAAGAGCTT...CAGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CCA 90 bp ATCTACCCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAGCCTTACCCCTGGATTaGGTTCTGACCTCAGCTCTG +
Preference number: 2 (lower is better)
Translates to: IYPGHRSPANTARGPSAEALPLD*VLTSAL
Trigger: CAGAGCTGAGGTCAGAACCCAATCCAGGGGTAAGGC...TTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CCA 90 bp CACTCCTCAGTGGAGGGGAGATCTACCCTGGACACCGAAGTCCTGCCAACACAGACCCTACGAAAGCTCTaGCATACTGGGCCCCACCAT +
Preference number: 2 (lower is better)
Translates to: HSSVEGRSTLDTEVLPTQTLRKL*HTGPHH
Trigger: ATGGTGGGGCCCAGTATGCCAGAGCTTTCGTAGGGT...CTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGATCTCCCCTCCACTGAGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CCA 90 bp TCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTTCCCACGGGCCCTGGGCACTGTaGATGGTGCCCTGGAATTAC +
Preference number: 2 (lower is better)
Translates to: SCLPKTPPTPRKEPSLSHGPWAL*MVPWNY
Trigger: GTAATTCCAGGGCACCATCCACAGTGCCCAGGGCCC...GTGGGAAAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CCA 90 bp CCCCTCACAGCTCTCAGCAGGAAACAACCTTGCGCACATCTTGATCTTGGCTTCAGGCTCACCAGGTCCTaGGCAGTCATCTCGGCCACG +
Preference number: 2 (lower is better)
Translates to: PLTALSRKQPCAHLDLGFRLTRS*AVISAT
Trigger: CGTGGCCGAGATGACTGCCCAGGACCTGGTGAGCCT...GAAGCCAAGATCAAGATGTGCGCAAGGTTGTTTCCTGCTGAGAGCTGTGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
3UTR-3UTR TCA 90 bp TCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTTCCCACGAGAGGACCCATCTCTaGGTCTCCTCTTCACCCTCC +
Preference number: 2 (lower is better)
Translates to: SCLPKTPPTPRKEPSLSHERTHL*VSSSPS
Trigger: GGAGGGTGAAGAGGAGACTCAGAGATGGGTCCTCTC...GTGGGAAAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR TCA 90 bp CCGCTGAGGAGGGCCTCTCGATGTTCAGCCAAAGAGATGCCTAGGCTCACCAGGGGCTCATGTACTCGGTaGCAATCATCAAGGTGCTTC +
Preference number: 2 (lower is better)
Translates to: PLRRASRCSAKEMPRLTRGSCTR*QSSRCF
Trigger: GAAGCACCTTGATGATTGTCACCGAGTACATGAGCC...CCTGGTGAGCCTAGGCATCTCTTTGGCTGAACATCGAGAGGCCCTCCTCAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000437645.5
3UTR-3UTR TCA 90 bp AGAGCAGAAGCTCCCCTCACAGCTCTCAGCAGGAAACAACCTTGCGCACATCTTCTGAAGTGGCCAAACTaGAGTGTCTCGGGAGCGGCC +
Preference number: 2 (lower is better)
Translates to: RAEAPLTALSRKQPCAHLLKWPN*SVSGAA
Trigger: GGCCGCTCCCGAGACACTTCAGTTTGGCCACTTCAG...AAGATGTGCGCAAGGTTGTTTCCTGCTGAGAGCTGTGAGGGGAGCTTCTGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000437645.5
3UTR-3UTR GCA 90 bp TCTGGGCTCTTTCTCATGCTAGCCTCTCTGCATGGACTCCTTTTGTCCGAGGCCGGCAGCTGCAGTCACTaGCAGGTAGAAGAAGACCCC +
Preference number: 2 (lower is better)
Translates to: SGLFLMLASLHGLLLSEAGSCSH*QVEEDP
Trigger: GGGGTCTTCTTCTACCTGGCAGTGACTGCAGCTGCC...GGCCTCGGACAAAAGGAGTCCATGCAGAGAGGCTAGCATGAGAAAGAGCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR GCA 90 bp CTGAGGAGGGCCTCTCGATGTTCAGCCAAAGAGATGCCTAGGCTCACCAGGTCCGTTCAGCCAAAGAGATaGCTAGGCTCACCAGGTCCT +
Preference number: 2 (lower is better)
Translates to: LRRASRCSAKEMPRLTRSVQPKR*LGSPGP
Trigger: AGGACCTGGTGAGCCTAGGCATCTCTTTGGCTGAAC...GGACCTGGTGAGCCTAGGCATCTCTTTGGCTGAACATCGAGAGGCCCTCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
3UTR-3UTR GCA 90 bp ACAGTAAATCCCTCTATGCAGAGAGATCTCAGACGCAGATTCTGGACACCCCTGTGGAGCACTCGTGCCTaGAGGGCGCTGATCCCGCTG +
Preference number: 2 (lower is better)
Translates to: TVNPSMQRDLRRRFWTPLWSTRA*RALIPL
Trigger: CAGCGGGATCAGCGCCCTGCAGGCACGAGTGCTCCA...CAGGGGTGTCCAGAATCTGCGTCTGAGATCTCTCTGCATAGAGGGATTTACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
3UTR-3UTR GCA 90 bp AGGCACCATATCACAGACAAGTTTTTATTATCACCTGCACCCCCTGGCCCTGCATGGCGACCGGGGAGCTaGAAGCAGCCACAGCACAGC +
Preference number: 2 (lower is better)
Translates to: RHHITDKFLLSPAPPGPAWRPGS*KQPQHS
Trigger: GCTGTGCTGTGGCTGCTTGCAGCTCCCCGGTCGCCA...TGCAGGGCCAGGGGGTGCAGGTGATAATAAAAACTTGTCTGTGATATGGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000437645.5
3UTR-3UTR CCA 90 bp ACACACAGCCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTTGGCCCCACCAGATCTaGGCCCAAGCAGAGGAAGAG +
Preference number: 2 (lower is better)
Translates to: THSQAEQTSVTGGLNKLSWPHQI*AQAEEE
Trigger: CTCTTCCTCTGCTTGGGCCCAGATCTGGTGGGGCCA...ACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGGCTGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CCA 90 bp ACACACAGCCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTTCTCATGGCCCGGCCTaGCCAGGACTTTTGGCCTCA +
Preference number: 2 (lower is better)
Translates to: THSQAEQTSVTGGLNKLSSHGPA*PGLLAS
Trigger: TGAGGCCAAAAGTCCTGGCCAGGCCGGGCCATGAGA...ACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGGCTGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CCA 90 bp CCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTGGAGAGAAAAGCTCTTaGGTCCCTGGGGAGATAACA +
Preference number: 2 (lower is better)
Translates to: PGHRSPANTARGPSAETAGEKSS*VPGEIT
Trigger: TGTTATCTCCCCAGGGACCCAAGAGCTTTTCTCTCC...AGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CCA 90 bp CCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTCCCTGTGGTGTACAGGGAAGTGGTaGTGCCATAGGGCAGGACCA +
Preference number: 2 (lower is better)
Translates to: PSRADKCHGRPKQTQSLWCTGKW*CHRAGP
Trigger: TGGTCCTGCCCTATGGCACCACCACTTCCCTGTACA...CCACAGGGACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CCA 90 bp CCCCTCACAGCTCTCAGCAGGAAACAACCTTGCGCACATCTTGATCTTGGCTTCTTATCCTGCACCCCCTaGCCCTGCAGCTGGAGCACT +
Preference number: 2 (lower is better)
Translates to: PLTALSRKQPCAHLDLGFLSCTP*PCSWST
Trigger: AGTGCTCCAGCTGCAGGGCCAGGGGGTGCAGGATAA...GAAGCCAAGATCAAGATGTGCGCAAGGTTGTTTCCTGCTGAGAGCTGTGAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432874.7
3UTR-3UTR CCA 90 bp CCCCTCGTGCCGCCTGAGGAAGCCGTCCAGGGCCCCATGGCTCATGTACTCGGTAGTGACTCCAGATCATaGACTGTTTCCAGCTTAAAT +
Preference number: 2 (lower is better)
Translates to: PLVPPEEAVQGPMAHVLGSDSRS*TVSSLN
Trigger: ATTTAAGCTGGAAACAGTCCATGATCTGGAGTCACT...ACCGAGTACATGAGCCATGGGGCCCTGGACGGCTTCCTCAGGCGGCACGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437645.5
3UTR-3UTR TCA 90 bp CCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTCCCTGTGGTCCTCCCTAGGGATTTaGACCTCTTTTCAGGGGCAC +
Preference number: 2 (lower is better)
Translates to: PSRADKCHGRPKQTQSLWSSLGI*TSFQGH
Trigger: GTGCCCCTGAAAAGAGGTTCAAATCCCTAGGGAGGA...CCACAGGGACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR TCA 90 bp TCTGGGCTCTTTCTCATGCTAGCCTCTCTGCATGGACTCCTTTTGTCCGAGGCCAATGGCAGTAGGGCATaGGCCAGGGCAATCTCAACC +
Preference number: 2 (lower is better)
Translates to: SGLFLMLASLHGLLLSEANGSRA*ARAIST
Trigger: GGTTGAGATTGCCCTGGCTCATGCCCTACTGCCATT...GGCCTCGGACAAAAGGAGTCCATGCAGAGAGGCTAGCATGAGAAAGAGCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR TCA 90 bp ACACACAGCCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTAGGACCCACGCTGTCTaGCTGGTCAATGGGTCTGTG +
Preference number: 2 (lower is better)
Translates to: THSQAEQTSVTGGLNKLSRTHAV*LVNGSV
Trigger: CACAGACCCATTGACCAGTCAGACAGCGTGGGTCCT...ACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGGCTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR TCA 90 bp GGAAACAACCTTGCGCACATCTTGATCTTGGCTTCCAGCCTCCAGAGCTGTGGGCAGATACTTCATGGCTaGTGCCAGCCCAGGCAGCAA +
Preference number: 2 (lower is better)
Translates to: GNNLAHILILASSLQSCGQILHG*CQPRQQ
Trigger: TTGCTGCCTGGGCTGGCATCAGCCATGAAGTATCTG...CCCACAGCTCTGGAGGCTGGAAGCCAAGATCAAGATGTGCGCAAGGTTGTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000437645.5
3UTR-3UTR GCA 90 bp GGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCAAACAGCACATGGCGAGCTaGCAGGCCCCGGTGAACGTA +
Preference number: 2 (lower is better)
Translates to: GQKPFHTSYTMIKQLPLKQHMAS*QAPVNV
Trigger: TACGTTCACCGGGGCCTGGCAGCTCGCCATGTGCTG...TTTGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000437645.5
3UTR CAA 90 bp AAGCTCCCCTCACAGCTCTCAGCAGGAAACAACCTTGCGCACATCTaGATCTTGGCTTCCAGCCTCCAGAGCTGTGGGACAGTAAATCCC +
Preference number: 2 (lower is better)
Translates to: KLPSQLSAGNNLAHI*ILASSLQSCGTVNP
Trigger: GGGATTTACTGTCCCACAGCTCTGGAGGCTGGAAGCCAAGATCAAGATGTGCGCAAGGTTGTTTCCTGCTGAGAGCTGTGAGGGGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
3UTR-3UTR TCA 90 bp TGCAGGGCGCTGATCCCGCTGAGGAGGGCCTCTCGATGTTCAGCCAAAGAGATGACACCAGCTATACAATaGTCAAGCAACTGCCACTCA +
Preference number: 2 (lower is better)
Translates to: CRALIPLRRASRCSAKEMTPAIQ*SSNCHS
Trigger: TGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGT...CATCTCTTTGGCTGAACATCGAGAGGCCCTCCTCAGCGGGATCAGCGCCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
3UTR-3UTR TCA 90 bp CCCCTCACAGCTCTCAGCAGGAAACAACCTTGCGCACATCTTGATCTTGGCTTCCAGATACTTCATGGCTaGTGCCAGCCCAGGCAGCAA +
Preference number: 2 (lower is better)
Translates to: PLTALSRKQPCAHLDLGFQILHG*CQPRQQ
Trigger: TTGCTGCCTGGGCTGGCATCAGCCATGAAGTATCTG...GAAGCCAAGATCAAGATGTGCGCAAGGTTGTTTCCTGCTGAGAGCTGTGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000437645.5
3UTR-3UTR CCA 90 bp CAGAGAATGACTGATGTAGCTGGAGATGAGGACGAGGCTCCATCCACCCAAGAAGGCTGTACAGGGAAGTaGTGGTGCCATAGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: QRMTDVAGDEDEAPSTQEGCTGK*WCHRAG
Trigger: TCCTGCCCTATGGCACCACCACTTCCCTGTACAGCC...TTCTTGGGTGGATGGAGCCTCGTCCTCATCTCCAGCTACATCAGTCATTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CCA 90 bp TCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTTCCCACCCTGGGCACTGTGGATaGTGCCCTGGAATTACTTCT +
Preference number: 2 (lower is better)
Translates to: SCLPKTPPTPRKEPSLSHPGHCG*CPGITS
Trigger: AGAAGTAATTCCAGGGCACCATCCACAGTGCCCAGG...GTGGGAAAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CCA 90 bp TCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTTCCCACCACACATTAAGAGAGTaGCTATCTCCCCCTCCAGCC +
Preference number: 2 (lower is better)
Translates to: SCLPKTPPTPRKEPSLSHHTLRE*LSPPPA
Trigger: GGCTGGAGGGGGAGATAGCCACTCTCTTAATGTGTG...GTGGGAAAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR CAA 90 bp CCCTCACAGCTCTCAGCAGGAAACAACCTTGCGCACATCTTGATCTaGGCTTCCAGCCTCCAGAGCTGTGGGACAGTAAATCCCTCTATG +
Preference number: 2 (lower is better)
Translates to: PSQLSAGNNLAHILI*ASSLQSCGTVNPSM
Trigger: CATAGAGGGATTTACTGTCCCACAGCTCTGGAGGCTGGAAGCCAAGATCAAGATGTGCGCAAGGTTGTTTCCTGCTGAGAGCTGTGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
3UTR-3UTR TCA 90 bp CTGCCATCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTTTAGACCAGCCTGTTTaGGAGAGAGGACCCATCTCT +
Preference number: 2 (lower is better)
Translates to: LPSCLPKTPPTPRKEPSLLDQPV*ERGPIS
Trigger: AGAGATGGGTCCTCTCTCTCAAACAGGCTGGTCTAA...AAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGATGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CCA 90 bp CAGAGAATGACTGATGTAGCTGGAGATGAGGACGAGGCTCCATCCACCCAAGAAGCTAGCCTCTCTGCATaGACTCCTTTTGTCCGAGGC +
Preference number: 2 (lower is better)
Translates to: QRMTDVAGDEDEAPSTQEASLSA*TPFVRG
Trigger: GCCTCGGACAAAAGGAGTCCATGCAGAGAGGCTAGC...TTCTTGGGTGGATGGAGCCTCGTCCTCATCTCCAGCTACATCAGTCATTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CCA 90 bp AGAGCAGAAGCTCCCCTCACAGCTCTCAGCAGGAAACAACCTTGCGCACATCTTCTGACAGATACTTCATaGCTGATGCCAGCCCAGGCA +
Preference number: 2 (lower is better)
Translates to: RAEAPLTALSRKQPCAHLLTDTS*LMPAQA
Trigger: TGCCTGGGCTGGCATCAGCCATGAAGTATCTGTCAG...AAGATGTGCGCAAGGTTGTTTCCTGCTGAGAGCTGTGAGGGGAGCTTCTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000437645.5
3UTR-3UTR CCA 90 bp TCTGGGCTCTTTCTCATGCTAGCCTCTCTGCATGGACTCCTTTTGTCCGAGGCCCCTGGGGAGATAACATaGCCCTTTATGCTTTTCCCA +
Preference number: 2 (lower is better)
Translates to: SGLFLMLASLHGLLLSEAPGEIT*PFMLFP
Trigger: TGGGAAAAGCATAAAGGGCCATGTTATCTCCCCAGG...GGCCTCGGACAAAAGGAGTCCATGCAGAGAGGCTAGCATGAGAAAGAGCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CCA 90 bp GACGGTGACTGTGGGCGCCCCTGTCTTCACCATGGAGTAAGTCTGCTCACTCTGGGGAAAAGAGCAGATTaGGATGTGACTCCATTTGTT +
Preference number: 2 (lower is better)
Translates to: DGDCGRPCLHHGVSLLTLGKRAD*DVTPFV
Trigger: AACAAATGGAGTCACATCCCAATCTGCTCTTTTCCC...CAGAGTGAGCAGACTTACTCCATGGTGAAGACAGGGGCGCCCACAGTCACCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525749.1
3UTR-3UTR TCA 90 bp AAGAGAGAGAATGAGAGGTCTGTTCCTAATGCCCCCACTAGCCTGAGAACCCAGTTCACTCATTGGCCCTaGCTGGACTCACTGGAAACT +
Preference number: 2 (lower is better)
Translates to: KRENERSVPNAPTSLRTQFTHWP*LDSLET
Trigger: AGTTTCCAGTGAGTCCAGTCAGGGCCAATGAGTGAA...CTGGGTTCTCAGGCTAGTGGGGGCATTAGGAACAGACCTCTCATTCTCTCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319637.6
3UTR-3UTR TCA 90 bp TCTGAAACTGGGATGCATCTTTCAGTTGGATGGCACAACATAGTTGGCTGTGATAGACAAGGTCGCTGCTaGCCAGCACATGGCGAGCTG +
Preference number: 2 (lower is better)
Translates to: SETGMHLSVGWHNIVGCDRQGRC*PAHGEL
Trigger: CAGCTCGCCATGTGCTGGTCAGCAGCGACCTTGTCT...ATCACAGCCAACTATGTTGTGCCATCCAACTGAAAGATGCATCCCAGTTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000437645.5
3UTR-3UTR GCA 90 bp GATCAAGCAACTGCCACTCAAAGAGGCACCATATCACAGACAAGTTTTTATTATTGCACCCCCTGGCCCTaGAGCTGGAGCACTCGTGCC +
Preference number: 2 (lower is better)
Translates to: DQATATQRGTISQTSFYYCTPWP*SWSTRA
Trigger: GGCACGAGTGCTCCAGCTGCAGGGCCAGGGGGTGCA...ATAATAAAAACTTGTCTGTGATATGGTGCCTCTTTGAGTGGCAGTTGCTTGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
3UTR-3UTR CCA 90 bp AAGAGAGAGAATGAGAGGTCTGTTCCTAATGCCCCCACTAGCCTGAGAACCCAGCTTGAACCCAGGAGGTaGAAGTTGCAGTTAGCCAAG +
Preference number: 2 (lower is better)
Translates to: KRENERSVPNAPTSLRTQLEPRR*KLQLAK
Trigger: CTTGGCTAACTGCAACTTCCACCTCCTGGGTTCAAG...CTGGGTTCTCAGGCTAGTGGGGGCATTAGGAACAGACCTCTCATTCTCTCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319637.6
3UTR-3UTR GCA 90 bp TCAAAGAAACTTGGTAAGCAACATTCTCCAGTTAGCCTTATCAAAGAGCTGATATGCACCCCCTGGCCCTaGAGCTGGAGCACTCGTGCC +
Preference number: 2 (lower is better)
Translates to: SKKLGKQHSPVSLIKELICTPWP*SWSTRA
Trigger: GGCACGAGTGCTCCAGCTGCAGGGCCAGGGGGTGCA...TATCAGCTCTTTGATAAGGCTAACTGGAGAATGTTGCTTACCAAGTTTCTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000534097.5
3UTR-3UTR CCA 90 bp AAGAGAGAGAATGAGAGGTCTGTTCCTAATGCCCCCACTAGCCTGAGAACCCAGCCTGACTGGACTCACTaGAAACTCCACAAGACTTCA +
Preference number: 2 (lower is better)
Translates to: KRENERSVPNAPTSLRTQPDWTH*KLHKTS
Trigger: TGAAGTCTTGTGGAGTTTCCAGTGAGTCCAGTCAGG...CTGGGTTCTCAGGCTAGTGGGGGCATTAGGAACAGACCTCTCATTCTCTCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319637.6
3UTR-3UTR TCA 90 bp AAGAGAGAGAATGAGAGGTCTGTTCCTAATGCCCCCACTAGCCTGAGAACCCAGTTCTTCCTTATGCACTaGGGAGACCTCATGATGTCA +
Preference number: 2 (lower is better)
Translates to: KRENERSVPNAPTSLRTQFFLMH*GDLMMS
Trigger: TGACATCATGAGGTCTCCTCAGTGCATAAGGAAGAA...CTGGGTTCTCAGGCTAGTGGGGGCATTAGGAACAGACCTCTCATTCTCTCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319637.6
3UTR-3UTR GCA 90 bp GGGAGCACAGTGATTGTAGTTCAGAGAGTGGGATGTGATCTTCGTAATCATCTACCAAGATCAAGCCAGTaGACTCCAGCCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: GSTVIVVQRVGCDLRNHLPRSSQ*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCACTGGCTTGATCTTGG...TAGATGATTACGAAGATCACATCCCACTCTCTGAACTACAATCACTGTGCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319637.6
3UTR-3UTR GCA 90 bp AACATCTCTGAAACTGGGATGCATCTTTCAGTTGGATGGCACAACATAGTTGGCGTTCAGCCAAAGAGATaGCTAGGCTCACCAGGTCCT +
Preference number: 2 (lower is better)
Translates to: NISETGMHLSVGWHNIVGVQPKR*LGSPGP
Trigger: AGGACCTGGTGAGCCTAGGCATCTCTTTGGCTGAAC...GCCAACTATGTTGTGCCATCCAACTGAAAGATGCATCCCAGTTTCAGAGATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
3UTR-3UTR CCA 90 bp AACTGCCACTCAAAGAGGCACCATATCACAGACAAGTTTTTATTATCACCTGCACTCAGACGCAGATTCTaGACACCCCTGTCCTCGAGG +
Preference number: 2 (lower is better)
Translates to: NCHSKRHHITDKFLLSPALRRRF*TPLSSR
Trigger: CCTCGAGGACAGGGGTGTCCAGAATCTGCGTCTGAG...TGCAGGTGATAATAAAAACTTGTCTGTGATATGGTGCCTCTTTGAGTGGCAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437645.5
ENST00000534097.5
3UTR-3UTR CCA 90 bp TCTGAAACTGGGATGCATCTTTCAGTTGGATGGCACAACATAGTTGGCTGTGATCTGACAGATACTTCATaGCTGATGCCAGCCCAGGCA +
Preference number: 2 (lower is better)
Translates to: SETGMHLSVGWHNIVGCDLTDTS*LMPAQA
Trigger: TGCCTGGGCTGGCATCAGCCATGAAGTATCTGTCAG...ATCACAGCCAACTATGTTGTGCCATCCAACTGAAAGATGCATCCCAGTTTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000437645.5
3UTR-3UTR GCA 90 bp TCTGAAACTGGGATGCATCTTTCAGTTGGATGGCACAACATAGTTGGCTGTGATAAGTTTTTATTATCCTaGACCCCCTGGCCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: SETGMHLSVGWHNIVGCDKFLLS*TPWPCS
Trigger: GCTGCAGGGCCAGGGGGTGCAGGATAATAAAAACTT...ATCACAGCCAACTATGTTGTGCCATCCAACTGAAAGATGCATCCCAGTTTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000432874.7
3UTR-3UTR CCA 90 bp TCCTTTATTGCCATGAAAATAAATAAACGAGAAGGCCTGTGCAAGGTGCCTAAGCTCATTGGCCCTGACTaGACTCACTGGAAACTCCAC +
Preference number: 2 (lower is better)
Translates to: SFIAMKINKREGLCKVPKLIGPD*THWKLH
Trigger: GTGGAGTTTCCAGTGAGTCCAGTCAGGGCCAATGAG...CTTAGGCACCTTGCACAGGCCTTCTCGTTTATTTATTTTCATGGCAATAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319637.6
3UTR CCA 72 bp GCTGGAGCGCAGCTTGCCACGGTCCTTGGGCAGGGCTaGGGGACTGGACCCCCACCGGAGTCCTGCCTTGGA +
Preference number: 3 (lower is better)
Translates to: AGAQLATVLGQG*GTGPPPESCLG
Trigger: TCCAAGGCAGGACTCCGGTGGGGGTCCAGTCCCCCAGCCCTGCCCAAGGACCGTGGCAAGCTGCGCTCCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR CCA 72 bp TCCAGTCAGCCCCTGCCAAGGCACAGGGAGCTGAGGTaGATGCACCTCTGGCCCAGCCCCCGACGCCTGAGC +
Preference number: 3 (lower is better)
Translates to: SSQPLPRHRELR*MHLWPSPRRLS
Trigger: GCTCAGGCGTCGGGGGCTGGGCCAGAGGTGCATCCACCTCAGCTCCCTGTGCCTTGGCAGGGGCTGACTGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CAA 90 bp CACCAGGTCCTGGGCAGTCATCTCGGCCACGGCCTCCAGGCTCCCATAGCCAGCCAGCAACCCCATCAGTaGCCCAGCCACCAGCTGCCC +
Preference number: 3 (lower is better)
Translates to: HQVLGSHLGHGLQAPIASQQPHQ*PSHQLP
Trigger: GGGCAGCTGGTGGCTGGGCAACTGATGGGGTTGCTG...GCTGGCTATGGGAGCCTGGAGGCCGTGGCCGAGATGACTGCCCAGGACCTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000437645.5
3UTR TCA 72 bp CTGGGCTCCGGCCACCATAGTGGTGTAGACAGCCTCTaGTCGGTCCCGGGGGCCCCGCCCGAAGCCAGAGAT +
Preference number: 3 (lower is better)
Translates to: LGSGHHSGVDSL*SVPGAPPEARD
Trigger: ATCTCTGGCTTCGGGCGGGGCCCCCGGGACCGATCAGAGGCTGTCTACACCACTATGGTGGCCGGAGCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432874.7
3UTR TCA 72 bp CAGCGTGAGGGCCTCGGCCAGGAAGCCGAGCCTCTGTaGGTCGGAGGCGCTGTCCCTCAGCATATGCACGGC +
Preference number: 3 (lower is better)
Translates to: QREGLGQEAEPL*VGGAVPQHMHG
Trigger: GCCGTGCATATGCTGAGGGACAGCGCCTCCGACTCACAGAGGCTCGGCTTCCTGGCCGAGGCCCTCACGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437645.5
3UTR TCA 72 bp TGGGCTCCGGCCACTCATAGTGGTGTAGACAGCCTCTaGTCGGTCCCGGGGGCCCCGCCCGAAGCCAGAGAT +
Preference number: 3 (lower is better)
Translates to: WAPATHSGVDSL*SVPGAPPEARD
Trigger: ATCTCTGGCTTCGGGCGGGGCCCCCGGGACCGATCAGAGGCTGTCTACACCACTATGAGTGGCCGGAGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437645.5
3UTR GCA 72 bp AGCCTCTGTGAGTCGGAGGCGCTGTCCCTCAGCATATaGACGGCTACGAGCAGCTCCTGGCGACCGGGGAGC +
Preference number: 3 (lower is better)
Translates to: SLCESEALSLSI*TATSSSWRPGS
Trigger: GCTCCCCGGTCGCCAGGAGCTGCTCGTAGCCGTGCATATGCTGAGGGACAGCGCCTCCGACTCACAGAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437645.5
3UTR TCA 72 bp GCCGCACGATGTGGCTATGGTCAAACTGGCCCAGCGTaGGGGCCTCGGCCAGGAAGCCGAGCCTCTGTGAGT +
Preference number: 3 (lower is better)
Translates to: AARCGYGQTGPA*GPRPGSRASVS
Trigger: ACTCACAGAGGCTCGGCTTCCTGGCCGAGGCCCTCACGCTGGGCCAGTTTGACCATAGCCACATCGTGCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437645.5
3UTR CCA 72 bp GCAGTGAAAGCGGGGAAGCTGTGGCCCCACCAGATCTaGGCCCAAGCAGAGGAAGAGAGCGCTCCCTCCCAC +
Preference number: 3 (lower is better)
Translates to: AVKAGKLWPHQI*AQAEEESAPSH
Trigger: GTGGGAGGGAGCGCTCTCTTCCTCTGCTTGGGCCCAGATCTGGTGGGGCCACAGCTTCCCCGCTTTCACTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CAA 90 bp TGCCTGCAGGGCGCTGATCCCGCTGAGGAGGGCCTCTCGATGTTCAGCCAAAGACAGCAACCCCATCAGTaGCCCAGCCACCAGCTGCCC +
Preference number: 3 (lower is better)
Translates to: CLQGADPAEEGLSMFSQRQQPHQ*PSHQLP
Trigger: GGGCAGCTGGTGGCTGGGCAACTGATGGGGTTGCTG...TCTTTGGCTGAACATCGAGAGGCCCTCCTCAGCGGGATCAGCGCCCTGCAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000437645.5
3UTR TCA 72 bp GCCCGAAGCCAGAGATCTTGCAGACAAGGTCGCTGCTaGCCAGCACATGGCGAGCTGCCAGGCCCCGGTGAA +
Preference number: 3 (lower is better)
Translates to: ARSQRSCRQGRC*PAHGELPGPGE
Trigger: TTCACCGGGGCCTGGCAGCTCGCCATGTGCTGGTCAGCAGCGACCTTGTCTGCAAGATCTCTGGCTTCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000437645.5
3UTR CCA 72 bp AGATCCAGCTGCCTTCCTGCCACCCTACGAAAGCTCTaGCATACTGGGCCCCACCATTCCCGGGGGCCCTTG +
Preference number: 3 (lower is better)
Translates to: RSSCLPATLRKL*HTGPHHSRGPL
Trigger: CAAGGGCCCCCGGGAATGGTGGGGCCCAGTATGCCAGAGCTTTCGTAGGGTGGCAGGAAGGCAGCTGGATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR CCA 72 bp TGGGACCTCACTCCTCAGTGGAGGGGAGATCTACCCTaGACACCGAAGTCCTGCCAACACAGCCAGGGGCCC +
Preference number: 3 (lower is better)
Translates to: WDLTPQWRGDLP*TPKSCQHSQGP
Trigger: GGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGATCTCCCCTCCACTGAGGAGTGAGGTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CAA 90 bp GGCTCCCATAGCCAGCAGCCGCGAAGCTGTCCTTGTAGCGGCACAGGTCCAGGGCCGAAGCCAGAGATCTaGCAGACAAGGTCGCTGCTG +
Preference number: 3 (lower is better)
Translates to: GSHSQQPRSCPCSGTGPGPKPEI*QTRSLL
Trigger: CAGCAGCGACCTTGTCTGCAAGATCTCTGGCTTCGG...CCCTGGACCTGTGCCGCTACAAGGACAGCTTCGCGGCTGCTGGCTATGGGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000437645.5
3UTR-3UTR CAA 90 bp GCCCAAGGCAGGGGGACACAGAAACCAGATCCTGAGTCTAGGGCTCTTGGGTATAGCTTGCCACGGTCCTaGGGCAGGGCTGGGGGACTG +
Preference number: 3 (lower is better)
Translates to: AQGRGTQKPDPESRALGYSLPRS*GRAGGL
Trigger: CAGTCCCCCAGCCCTGCCCAAGGACCGTGGCAAGCT...ATACCCAAGAGCCCTAGACTCAGGATCTGGTTTCTGTGTCCCCCTGCCTTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CAA 90 bp CCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTCCCTGTGGCTGCTGGAGCGCAGCTaGCCACGGTCCTTGGGCAGG +
Preference number: 3 (lower is better)
Translates to: PSRADKCHGRPKQTQSLWLLERS*PRSLGR
Trigger: CCTGCCCAAGGACCGTGGCAAGCTGCGCTCCAGCAG...CCACAGGGACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR GCA 72 bp AGGCACCTCTGTGAGTCACTGTCCCCCACCTCTGGGTaGTCTGCAAAGAGGCACTGCACCTTCCCGCCTCTG +
Preference number: 3 (lower is better)
Translates to: RHLCESLSPTSG*SAKRHCTFPPL
Trigger: CAGAGGCGGGAAGGTGCAGTGCCTCTTTGCAGAGCACCCAGAGGTGGGGGACAGTGACTCACAGAGGTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CAA 90 bp CTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTGCATTCCCGGGGGCCCTaGTGGATAAGGAACTCCACG +
Preference number: 3 (lower is better)
Translates to: LDTEVLPTQPGALLQKQLHSRGP*WIRNST
Trigger: CGTGGAGTTCCTTATCCACAAGGGCCCCCGGGAATG...CAGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CAA 90 bp CACTCCTCAGTGGAGGGGAGATCTACCCTGGACACCGAAGTCCTGCCAACACAGCCGAGGCCTGCCATCTaGCCTGCCGAAAACTCCACC +
Preference number: 3 (lower is better)
Translates to: HSSVEGRSTLDTEVLPTQPRPAI*PAENST
Trigger: GGTGGAGTTTTCGGCAGGCAAGATGGCAGGCCTCGG...CTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGATCTCCCCTCCACTGAGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CAA 90 bp GTCCTTGTAGCGGCACAGGTCCAGGGCCTCCAGCCACGCGCCCACAGAGCCAAACGCCAGCTAAAGGTATaGGCGTATCCGGAACAGTCT +
Preference number: 3 (lower is better)
Translates to: VLVAAQVQGLQPRAHRAKRQLKV*AYPEQS
Trigger: AGACTGTTCCGGATACGCCAATACCTTTAGCTGGCG...TTTGGCTCTGTGGGCGCGTGGCTGGAGGCCCTGGACCTGTGCCGCTACAAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432874.7
3UTR TCA 72 bp CCCCAGCCCCCAGTGGGTACAAATGGCAGTAGGGCATaGGCCAGGGCAATCTCAACCCACTGTCTTCCCTCC +
Preference number: 3 (lower is better)
Translates to: PQPPVGTNGSRA*ARAISTHCLPS
Trigger: GGAGGGAAGACAGTGGGTTGAGATTGCCCTGGCTCATGCCCTACTGCCATTTGTACCCACTGGGGGCTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR GCA 72 bp CAGTGGAGGGGAGATCTACCCTGGACACCGAAGTCCTaGCAACACAGCCAGGGGCCCTTCTGCAGAAACAGC +
Preference number: 3 (lower is better)
Translates to: QWRGDLPWTPKS*QHSQGPFCRNS
Trigger: GCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGATCTCCCCTCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR CCA 72 bp GCCTCTAGAGTCCCCAAGGGCTGTACAGGGAAGTGGTaGTGCCATAGGGCAGGACCAAGGACTCTCTCCCCA +
Preference number: 3 (lower is better)
Translates to: ASRVPKGCTGKW*CHRAGPRTLSP
Trigger: TGGGGAGAGAGTCCTTGGTCCTGCCCTATGGCACCACCACTTCCCTGTACAGCCCTTGGGGACTCTAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR CCA 72 bp GTCGCCTCTAGAGTCCCCAAGGGCTGTACAGGGAAGTaGTGGTGCCATAGGGCAGGACCAAGGACTCTCTCC +
Preference number: 3 (lower is better)
Translates to: VASRVPKGCTGK*WCHRAGPRTLS
Trigger: GGAGAGAGTCCTTGGTCCTGCCCTATGGCACCACCACTTCCCTGTACAGCCCTTGGGGACTCTAGAGGCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR GCA 72 bp TCTAGAGTCCCCAAGGGCTGTACAGGGAAGTGGTGGTaGCATAGGGCAGGACCAAGGACTCTCTCCCCAGAG +
Preference number: 3 (lower is better)
Translates to: SRVPKGCTGKWW*HRAGPRTLSPE
Trigger: CTCTGGGGAGAGAGTCCTTGGTCCTGCCCTATGGCACCACCACTTCCCTGTACAGCCCTTGGGGACTCTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR CCA 72 bp TGGGACCCAACAGGATTCTGGGACCTCACTCCTCAGTaGAGGGGAGATCTACCCTGGACACCGAAGTCCTGC +
Preference number: 3 (lower is better)
Translates to: WDPTGFWDLTPQ*RGDLPWTPKSC
Trigger: GCAGGACTTCGGTGTCCAGGGTAGATCTCCCCTCCACTGAGGAGTGAGGTCCCAGAATCCTGTTGGGTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CAA 90 bp CTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTGCTGCATGGACTCCTTTaGTCCGAGGCCTGCCATCTT +
Preference number: 3 (lower is better)
Translates to: LDTEVLPTQPGALLQKQLLHGLL*SEACHL
Trigger: AAGATGGCAGGCCTCGGACAAAAGGAGTCCATGCAG...CAGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR CCA 72 bp CGCCTCTGGGCTCTTTCTCATGCTAGCCTCTCTGCATaGACTCCTTTTGTCCGAGGCCTGCCATCTTGCCTG +
Preference number: 3 (lower is better)
Translates to: RLWALSHASLSA*TPFVRGLPSCL
Trigger: CAGGCAAGATGGCAGGCCTCGGACAAAAGGAGTCCATGCAGAGAGGCTAGCATGAGAAAGAGCCCAGAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CAA 90 bp CTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTGCCCTGGAATTACTTCTaGGTACCTGAGCTCTTCTCC +
Preference number: 3 (lower is better)
Translates to: LDTEVLPTQPGALLQKQLPWNYF*VPELFS
Trigger: GGAGAAGAGCTCAGGTACCAAGAAGTAATTCCAGGG...CAGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CAA 90 bp GCTCCCCTCACAGCTCTCAGCAGGAAACAACCTTGCGCACATCTTGATCTTGGCCCGAAGCCAGAGATCTaGCAGACAAGGTCGCTGCTG +
Preference number: 3 (lower is better)
Translates to: APLTALSRKQPCAHLDLGPKPEI*QTRSLL
Trigger: CAGCAGCGACCTTGTCTGCAAGATCTCTGGCTTCGG...GCCAAGATCAAGATGTGCGCAAGGTTGTTTCCTGCTGAGAGCTGTGAGGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000437645.5
3UTR-3UTR CAA 90 bp AAGAGAGAGAATGAGAGGTCTGTTCCTAATGCCCCCACTAGCCTGAGAACCCAGACTTCAGGGCTCTCCTaGGGCTCCAGAGTCCAAGGC +
Preference number: 3 (lower is better)
Translates to: KRENERSVPNAPTSLRTQTSGLS*GSRVQG
Trigger: GCCTTGGACTCTGGAGCCCAAGGAGAGCCCTGAAGT...CTGGGTTCTCAGGCTAGTGGGGGCATTAGGAACAGACCTCTCATTCTCTCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319637.6
3UTR-3UTR CAA 90 bp GCAGAAGCTCCCCTCACAGCTCTCAGCAGGAAACAACCTTGCGCACATCTTGATCCATCCTCCACAGCCTaGATCACGTCTTGGCCAGAC +
Preference number: 3 (lower is better)
Translates to: AEAPLTALSRKQPCAHLDPSSTA*ITSWPD
Trigger: GTCTGGCCAAGACGTGATCAAGGCTGTGGAGGATGG...ATCAAGATGTGCGCAAGGTTGTTTCCTGCTGAGAGCTGTGAGGGGAGCTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000437645.5
3UTR TCA 72 bp CCCCCATCTGTACACTGGGGGTTAGACCAGCCTGTTTaGGAGAGAGGACCCATCTCTGAGTCTCCTCTTCAC +
Preference number: 3 (lower is better)
Translates to: PPSVHWGLDQPV*ERGPISESPLH
Trigger: GTGAAGAGGAGACTCAGAGATGGGTCCTCTCTCTCAAACAGGCTGGTCTAACCCCCAGTGTACAGATGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR GCA 72 bp GAAGCTCCCCTCACAGCTCTCAGCAGGAAACAACCTTaGGCACATCTTGATCTTGGCTTCCAGCCTCCAGAG +
Preference number: 3 (lower is better)
Translates to: EAPLTALSRKQP*AHLDLGFQPPE
Trigger: CTCTGGAGGCTGGAAGCCAAGATCAAGATGTGCGCAAGGTTGTTTCCTGCTGAGAGCTGTGAGGGGAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
3UTR-3UTR CAA 90 bp TCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTTCCCACGTCCTCCCTAGGGATTaGAACCTCTTTTCAGGGGCA +
Preference number: 3 (lower is better)
Translates to: SCLPKTPPTPRKEPSLSHVLPRD*NLFSGA
Trigger: TGCCCCTGAAAAGAGGTTCAAATCCCTAGGGAGGAC...GTGGGAAAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CAA 90 bp TCTGGGCTCTTTCTCATGCTAGCCTCTCTGCATGGACTCCTTTTGTCCGAGGCCGTTAGACCAGCCTGTTaGAGAGAGAGGACCCATCTC +
Preference number: 3 (lower is better)
Translates to: SGLFLMLASLHGLLLSEAVRPAC*RERTHL
Trigger: GAGATGGGTCCTCTCTCTCAAACAGGCTGGTCTAAC...GGCCTCGGACAAAAGGAGTCCATGCAGAGAGGCTAGCATGAGAAAGAGCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR-3UTR CAA 90 bp ATAAGGAACTCCACGGTGGGCTCAGCACAACCACTTCTGCCAGGGCTCTTCAAAAGCCTTACCCCTGGATaGGGTTCTGACCTCAGCTCT +
Preference number: 3 (lower is better)
Translates to: IRNSTVGSAQPLLPGLFKSLTPG*GSDLSS
Trigger: AGAGCTGAGGTCAGAACCCAATCCAGGGGTAAGGCT...TTTGAAGAGCCCTGGCAGAAGTGGTTGTGCTGAGCCCACCGTGGAGTTCCTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR CCA 72 bp CTAGTAAGTTCACTCATTGGCCCTGACTGGACTCACTaGAAACTCCACAAGACTTCAGGGCTCTCCTTGGGC +
Preference number: 3 (lower is better)
Translates to: LVSSLIGPDWTH*KLHKTSGLSLG
Trigger: GCCCAAGGAGAGCCCTGAAGTCTTGTGGAGTTTCCAGTGAGTCCAGTCAGGGCCAATGAGTGAACTTACTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319637.6
3UTR-3UTR CAA 90 bp GGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCAAAAGCCTTGATCACGTCTaGGCCAGACATGTCCCAGTA +
Preference number: 3 (lower is better)
Translates to: GQKPFHTSYTMIKQLPLKSLDHV*ARHVPV
Trigger: TACTGGGACATGTCTGGCCAAGACGTGATCAAGGCT...TTTGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000437645.5
3UTR TCA 72 bp GAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATaGTCAAGCAACTGCCACTCAAAGAGGCACCATATC +
Preference number: 3 (lower is better)
Translates to: EGGRSPSTPAIQ*SSNCHSKRHHI
Trigger: GATATGGTGCCTCTTTGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
3UTR CCA 72 bp GCACATCTTGATCTTGGCTTCCAGCCTCCAGAGCTGTaGGACAGTAAATCCCTCTATGCAGAGAGATCTCAG +
Preference number: 3 (lower is better)
Translates to: AHLDLGFQPPEL*DSKSLYAERSQ
Trigger: CTGAGATCTCTCTGCATAGAGGGATTTACTGTCCCACAGCTCTGGAGGCTGGAAGCCAAGATCAAGATGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
3UTR TCA 72 bp CAAAGAGCTGATATTTTGCTCTCCACAGAGGGAAGATaGTGCGAAGAGAGAGTGGGAAGATGGCCACAGGCA +
Preference number: 3 (lower is better)
Translates to: QRADILLSTEGR*CEERVGRWPQA
Trigger: TGCCTGTGGCCATCTTCCCACTCTCTCTTCGCATCATCTTCCCTCTGTGGAGAGCAAAATATCAGCTCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000534097.5
3UTR CCA 72 bp CAATTTCATCTAGTAAGTTCACTCATTGGCCCTGACTaGACTCACTGGAAACTCCACAAGACTTCAGGGCTC +
Preference number: 3 (lower is better)
Translates to: QFHLVSSLIGPD*THWKLHKTSGL
Trigger: GAGCCCTGAAGTCTTGTGGAGTTTCCAGTGAGTCCAGTCAGGGCCAATGAGTGAACTTACTAGATGAAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319637.6
3UTR TCA 72 bp CAGTCAATTTCATCTAGTAAGTTCACTCATTGGCCCTaGCTGGACTCACTGGAAACTCCACAAGACTTCAGG +
Preference number: 3 (lower is better)
Translates to: QSISSSKFTHWP*LDSLETPQDFR
Trigger: CCTGAAGTCTTGTGGAGTTTCCAGTGAGTCCAGTCAGGGCCAATGAGTGAACTTACTAGATGAAATTGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319637.6
3UTR TCA 72 bp GTAAGCAACATTCTCCAGTTAGCCTTATCAAAGAGCTaGTATTTTGCTCTCCACAGAGGGAAGATGATGCGA +
Preference number: 3 (lower is better)
Translates to: VSNILQLALSKS*YFALHRGKMMR
Trigger: TCGCATCATCTTCCCTCTGTGGAGAGCAAAATATCAGCTCTTTGATAAGGCTAACTGGAGAATGTTGCTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000534097.5
3UTR TCA 72 bp GCATCTTTCAGTTGGATGGCACAACATAGTTGGCTGTaGTGTTTCTTTCTTGGTAGGACATCTTACACTCAA +
Preference number: 3 (lower is better)
Translates to: ASFSWMAQHSWL*CFFLGRTSYTQ
Trigger: TTGAGTGTAAGATGTCCTACCAAGAAAGAAACATCACAGCCAACTATGTTGTGCCATCCAACTGAAAGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
3UTR CCA 72 bp AACATCTCTGAAACTGGGATGCATCTTTCAGTTGGATaGCACAACATAGTTGGCTGTGATGTTTCTTTCTTG +
Preference number: 3 (lower is better)
Translates to: NISETGMHLSVG*HNIVGCDVSFL
Trigger: CAAGAAAGAAACATCACAGCCAACTATGTTGTGCCATCCAACTGAAAGATGCATCCCAGTTTCAGAGATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp TCAGCCCCTGCCAAGGCACAGGGAGCTGAGGTGGATGCACCTCTGGCCCAGCCCGCAGGTGCAGCAGCGTaGCGGCTCGCTCCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: SAPAKAQGAEVDAPLAQPAGAAA*RLAPAA
Trigger: GGCTGCGGGAGCGAGCCGCCACGCTGCTGCACCTGC...GGGCTGGGCCAGAGGTGCATCCACCTCAGCTCCCTGTGCCTTGGCAGGGGCTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp GCGGCACAGGTCCAGGGCCTCCAGCCACGCGCCCACAGAGCCAAAGGAGGGGAACAAACTGGCCCAGCGTaGGGGCCTCGGCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: AAQVQGLQPRAHRAKGGEQTGPA*GPRPGS
Trigger: GCTTCCTGGCCGAGGCCCTCACGCTGGGCCAGTTTG...TTCCCCTCCTTTGGCTCTGTGGGCGCGTGGCTGGAGGCCCTGGACCTGTGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp TCAGCCCCTGCCAAGGCACAGGGAGCTGAGGTGGATGCACCTCTGGCCCAGCCCTCCCGCAGCCCTGCCTaGCGCGGTAGGAAGGCCACG +
Preference number: 4 (lower is better)
Translates to: SAPAKAQGAEVDAPLAQPSRSPA*RGRKAT
Trigger: CGTGGCCTTCCTACCGCGCCAGGCAGGGCTGCGGGA...GGGCTGGGCCAGAGGTGCATCCACCTCAGCTCCCTGTGCCTTGGCAGGGGCTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp GGAAGGTGGAGAAGGCACGGTCCGCTAGTGGGGTGGGAGGCCTGGGTCCTTCTGCTGGTCCCTGGACCCTaGGGCAGCCTCCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: GRWRRHGPLVGWEAWVLLLVPGP*GSLPQG
Trigger: ACCCTGGGGGAGGCTGCCTCAGGGTCCAGGGACCAG...CAGAAGGACCCAGGCCTCCCACCCCACTAGCGGACCGTGCCTTCTCCACCTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437645.5
CDS-3UTR TCA 90 bp TCAGCCCCTGCCAAGGCACAGGGAGCTGAGGTGGATGCACCTCTGGCCCAGCCCCAAACTGGCCCAGCGTaGGGGCCTCGGCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: SAPAKAQGAEVDAPLAQPQTGPA*GPRPGS
Trigger: GCTTCCTGGCCGAGGCCCTCACGCTGGGCCAGTTTG...GGGCTGGGCCAGAGGTGCATCCACCTCAGCTCCCTGTGCCTTGGCAGGGGCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp GGCTCCCATAGCCAGCAGCCGCGAAGCTGTCCTTGTAGCGGCACAGGTCCAGGGGGTGTAGACAGCCTCTaGTCGGTCCCGGGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: GSHSQQPRSCPCSGTGPGGVDSL*SVPGAP
Trigger: CGGGGCCCCCGGGACCGATCAGAGGCTGTCTACACC...CCCTGGACCTGTGCCGCTACAAGGACAGCTTCGCGGCTGCTGGCTATGGGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp ACCCTACGAAAGCTCTGGCATACTGGGCCCCACCATTCCCGGGGGCCCTTGTGGCGGTGGCTGGGAACGTaGCCAGGCCCCGCACGGTGG +
Preference number: 4 (lower is better)
Translates to: TLRKLWHTGPHHSRGPLWRWLGT*PGPARW
Trigger: CCACCGTGCGGGGCCTGGCCACGTTCCCAGCCACCG...CCACAAGGGCCCCCGGGAATGGTGGGGCCCAGTATGCCAGAGCTTTCGTAGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp ACCCTACGAAAGCTCTGGCATACTGGGCCCCACCATTCCCGGGGGCCCTTGTGGCTCGGCTGCGGTGGCTaGGAACGTGGCCAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: TLRKLWHTGPHHSRGPLWLGCGG*ERGQAP
Trigger: CGGGGCCTGGCCACGTTCCCAGCCACCGCAGCCGAG...CCACAAGGGCCCCCGGGAATGGTGGGGCCCAGTATGCCAGAGCTTTCGTAGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp TCAGCCCCTGCCAAGGCACAGGGAGCTGAGGTGGATGCACCTCTGGCCCAGCCCCCGAGGGCGGGTCGGTaGGTGAGCGCGCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: SAPAKAQGAEVDAPLAQPPRAGR*VSAHSC
Trigger: ACAGCTATGCGCGCTCACCCACCGACCCGCCCTCGG...GGGCTGGGCCAGAGGTGCATCCACCTCAGCTCCCTGTGCCTTGGCAGGGGCTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp ATGCCTAGGCTCACCAGGTCCTGGGCAGTCATCTCGGCCACGGCCTCCAGGCTCCGGGGCTCTGGTCCCTaGACCCTGAGGCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: MPRLTRSWAVISATASRLRGSGP*TLRQPP
Trigger: GGGAGGCTGCCTCAGGGTCCAGGGACCAGAGCCCCG...GAGCCTGGAGGCCGTGGCCGAGATGACTGCCCAGGACCTGGTGAGCCTAGGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp GGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAGTGCTCTGGGCACGGTaGGCAGAGGGGCCGCCGCGG +
Preference number: 4 (lower is better)
Translates to: GHPCPRGRGQKPFHTSYTVLWAR*AEGPPR
Trigger: CCGCGGCGGCCCCTCTGCTCACCGTGCCCAGAGCAC...TGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR TCA 90 bp ACCCTACGAAAGCTCTGGCATACTGGGCCCCACCATTCCCGGGGGCCCTTGTGGCTGGTCCCTGGACCCTaGGGCAGCCTCCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: TLRKLWHTGPHHSRGPLWLVPGP*GSLPQG
Trigger: ACCCTGGGGGAGGCTGCCTCAGGGTCCAGGGACCAG...CCACAAGGGCCCCCGGGAATGGTGGGGCCCAGTATGCCAGAGCTTTCGTAGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp GGTCCAGGGCCTCCAGCCACGCGCCCACAGAGCCAAAGGAGGGGAAGGTGGAGAGAAGCCGAGCCTCTGTaGGTCGGAGGCGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: GPGPPATRPQSQRRGRWREAEPL*VGGAVP
Trigger: AGGGACAGCGCCTCCGACTCACAGAGGCTCGGCTTC...TCTCCACCTTCCCCTCCTTTGGCTCTGTGGGCGCGTGGCTGGAGGCCCTGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp GGCTCCCATAGCCAGCAGCCGCGAAGCTGTCCTTGTAGCGGCACAGGTCCAGGGCAAACTGGCCCAGCGTaGGGGCCTCGGCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GSHSQQPRSCPCSGTGPGQTGPA*GPRPGS
Trigger: GCTTCCTGGCCGAGGCCCTCACGCTGGGCCAGTTTG...CCCTGGACCTGTGCCGCTACAAGGACAGCTTCGCGGCTGCTGGCTATGGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp TCAGCCCCTGCCAAGGCACAGGGAGCTGAGGTGGATGCACCTCTGGCCCAGCCCTGGCGACCGGGGAGCTaGAAGCAGCCACAGCACAGC +
Preference number: 4 (lower is better)
Translates to: SAPAKAQGAEVDAPLAQPWRPGS*KQPQHS
Trigger: GCTGTGCTGTGGCTGCTTGCAGCTCCCCGGTCGCCA...GGGCTGGGCCAGAGGTGCATCCACCTCAGCTCCCTGTGCCTTGGCAGGGGCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp GGCCACGGCCTCCAGGCTCCCATAGCCAGCAGCCGCGAAGCTGTCCTTGTAGCGGCTACGAGCAGCTCCTaGCGACCGGGGAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: GHGLQAPIASSREAVLVAATSSS*RPGSCK
Trigger: CTTGCAGCTCCCCGGTCGCCAGGAGCTGCTCGTAGC...CGCTACAAGGACAGCTTCGCGGCTGCTGGCTATGGGAGCCTGGAGGCCGTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp TCAGCCCCTGCCAAGGCACAGGGAGCTGAGGTGGATGCACCTCTGGCCCAGCCCCCTGGGCCGCTCACCTaGGTCCTTCTGCCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: SAPAKAQGAEVDAPLAQPPGPLT*VLLPAV
Trigger: GACTGCTGGCAGAAGGACCCAGGTGAGCGGCCCAGG...GGGCTGGGCCAGAGGTGCATCCACCTCAGCTCCCTGTGCCTTGGCAGGGGCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp AGCGGCACAGGTCCAGGGCCTCCAGCCACGCGCCCACAGAGCCAAAGGAGGGGAAGACAAGGTCGCTGCTaGCCAGCACATGGCGAGCTG +
Preference number: 4 (lower is better)
Translates to: SGTGPGPPATRPQSQRRGRQGRC*PAHGEL
Trigger: CAGCTCGCCATGTGCTGGTCAGCAGCGACCTTGTCT...TCCCCTCCTTTGGCTCTGTGGGCGCGTGGCTGGAGGCCCTGGACCTGTGCCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp TGCCTGCAGGGCGCTGATCCCGCTGAGGAGGGCCTCTCGATGTTCAGCCAAAGAGGTGTAGACAGCCTCTaGTCGGTCCCGGGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: CLQGADPAEEGLSMFSQRGVDSL*SVPGAP
Trigger: CGGGGCCCCCGGGACCGATCAGAGGCTGTCTACACC...TCTTTGGCTGAACATCGAGAGGCCCTCCTCAGCGGGATCAGCGCCCTGCAGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp CCTGGGCAGTCATCTCGGCCACGGCCTCCAGGCTCCCATAGCCAGCAGCCGCGACTGAAGTGGCCAAACTaGAGTGTCTCGGGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: PGQSSRPRPPGSHSQQPRLKWPN*SVSGAA
Trigger: GGCCGCTCCCGAGACACTTCAGTTTGGCCACTTCAG...TCGCGGCTGCTGGCTATGGGAGCCTGGAGGCCGTGGCCGAGATGACTGCCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp AGATGCCTAGGCTCACCAGGTCCTGGGCAGTCATCTCGGCCACGGCCTCCAGGCTGGCGACCGGGGAGCTaGAAGCAGCCACAGCACAGC +
Preference number: 4 (lower is better)
Translates to: RCLGSPGPGQSSRPRPPGWRPGS*KQPQHS
Trigger: GCTGTGCTGTGGCTGCTTGCAGCTCCCCGGTCGCCA...GCCTGGAGGCCGTGGCCGAGATGACTGCCCAGGACCTGGTGAGCCTAGGCATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp GCCTGCAGGGCGCTGATCCCGCTGAGGAGGGCCTCTCGATGTTCAGCCAAAGAGACCAGCTGCCCCTCGTaGCGCCTGAGGAAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: ACRALIPLRRASRCSAKETSCPS*RLRKPS
Trigger: GGACGGCTTCCTCAGGCGGCACGAGGGGCAGCTGGT...CTCTTTGGCTGAACATCGAGAGGCCCTCCTCAGCGGGATCAGCGCCCTGCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp GTCCTTGTAGCGGCACAGGTCCAGGGCCTCCAGCCACGCGCCCACAGAGCCAAATGGAGCACTCGTGCCTaGAGGGCGCTGATCCCGCTG +
Preference number: 4 (lower is better)
Translates to: VLVAAQVQGLQPRAHRAKWSTRA*RALIPL
Trigger: CAGCGGGATCAGCGCCCTGCAGGCACGAGTGCTCCA...TTTGGCTCTGTGGGCGCGTGGCTGGAGGCCCTGGACCTGTGCCGCTACAAGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp ACCCTACGAAAGCTCTGGCATACTGGGCCCCACCATTCCCGGGGGCCCTTGTGGTGCACCCCCTGGCCCTaGAGCTGGAGCACTCGTGCC +
Preference number: 4 (lower is better)
Translates to: TLRKLWHTGPHHSRGPLWCTPWP*SWSTRA
Trigger: GGCACGAGTGCTCCAGCTGCAGGGCCAGGGGGTGCA...CCACAAGGGCCCCCGGGAATGGTGGGGCCCAGTATGCCAGAGCTTTCGTAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp TCAGCCCCTGCCAAGGCACAGGGAGCTGAGGTGGATGCACCTCTGGCCCAGCCCCAGCCCAGCTCGGCCTaGGAGGCTTTGGAATCCAGG +
Preference number: 4 (lower is better)
Translates to: SAPAKAQGAEVDAPLAQPQPSSA*EALESR
Trigger: CCTGGATTCCAAAGCCTCCCAGGCCGAGCTGGGCTG...GGGCTGGGCCAGAGGTGCATCCACCTCAGCTCCCTGTGCCTTGGCAGGGGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp GGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACACGGTGGCTGGGAACGTaGCCAGGCCCCGCACGGTGG +
Preference number: 4 (lower is better)
Translates to: GHPCPRGRGQKPFHTSYTRWLGT*PGPARW
Trigger: CCACCGTGCGGGGCCTGGCCACGTTCCCAGCCACCG...TGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR CCA 90 bp GCGGCACAGGTCCAGGGCCTCCAGCCACGCGCCCACAGAGCCAAAGGAGGGGAACTGGGGTTAAAACTCTaGGCCTCCCAGGATGGCCCC +
Preference number: 4 (lower is better)
Translates to: AAQVQGLQPRAHRAKGGELGLKL*ASQDGP
Trigger: GGGGCCATCCTGGGAGGCCCAGAGTTTTAACCCCAG...TTCCCCTCCTTTGGCTCTGTGGGCGCGTGGCTGGAGGCCCTGGACCTGTGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp AGGTCCAGGGCCTCCAGCCACGCGCCCACAGAGCCAAAGGAGGGGAAGGTGGAGACAATGGCGGGGCTCTaGTCCCTGGACCCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: RSRASSHAPTEPKEGKVETMAGL*SLDPEA
Trigger: TGCCTCAGGGTCCAGGGACCAGAGCCCCGCCATTGT...CTCCACCTTCCCCTCCTTTGGCTCTGTGGGCGCGTGGCTGGAGGCCCTGGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
3UTR CAA 72 bp GATCGGTCCCGGGGGCCCCGCCCGAAGCCAGAGATCTaGCAGACAAGGTCGCTGCTGACCAGCACATGGCGA +
Preference number: 4 (lower is better)
Translates to: DRSRGPRPKPEI*QTRSLLTSTWR
Trigger: TCGCCATGTGCTGGTCAGCAGCGACCTTGTCTGCAAGATCTCTGGCTTCGGGCGGGGCCCCCGGGACCGATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000437645.5
CDS-3UTR TCA 90 bp TGGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACGGTGTAGACAGCCTCTaGTCGGTCCCGGGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: WTPLSSRKGAEALPHQLYGVDSL*SVPGAP
Trigger: CGGGGCCCCCGGGACCGATCAGAGGCTGTCTACACC...GTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp TCAGCCCCTGCCAAGGCACAGGGAGCTGAGGTGGATGCACCTCTGGCCCAGCCCCCCATTACTTGGCAGTaGAGTCCAGCCCAGCTCGGC +
Preference number: 4 (lower is better)
Translates to: SAPAKAQGAEVDAPLAQPPITWQ*SPAQLG
Trigger: GCCGAGCTGGGCTGGACTGCACTGCCAAGTAATGGG...GGGCTGGGCCAGAGGTGCATCCACCTCAGCTCCCTGTGCCTTGGCAGGGGCTGA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp CCATTCCCGGGGGCCCTTGTGGATAAGGAACTCCACGGTGGGCTCAGCACAACCCCGCGGCGCCAGGGATaGTGCTGCAGTCACGGAGTG +
Preference number: 4 (lower is better)
Translates to: PFPGALVDKELHGGLSTTPRRQG*CCSHGV
Trigger: CACTCCGTGACTGCAGCAGCATCCCTGGCGCCGCGG...GGTTGTGCTGAGCCCACCGTGGAGTTCCTTATCCACAAGGGCCCCCGGGAATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp ACTCGTGCCTGCAGGGCGCTGATCCCGCTGAGGAGGGCCTCTCGATGTTCAGCCCAGCACATGGCGAGCTaGCAGGCCCCGGTGAACGTA +
Preference number: 4 (lower is better)
Translates to: TRACRALIPLRRASRCSAQHMAS*QAPVNV
Trigger: TACGTTCACCGGGGCCTGGCAGCTCGCCATGTGCTG...GGCTGAACATCGAGAGGCCCTCCTCAGCGGGATCAGCGCCCTGCAGGCACGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp TGGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACCGCTCTCGGCTGCGGTaGCTGGGAACGTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: WTPLSSRKGAEALPHQLYRSRLR*LGTWPG
Trigger: GCCTGGCCACGTTCCCAGCCACCGCAGCCGAGAGCG...GTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR CCA 90 bp GCCTGCAGGGCGCTGATCCCGCTGAGGAGGGCCTCTCGATGTTCAGCCAAAGAGCGTACTCCGTGTCATTaGCCCCAGGGGCTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: ACRALIPLRRASRCSAKERTPCH*PQGLRQ
Trigger: CTGCCGGAGCCCCTGGGGCCAATGACACGGAGTACG...CTCTTTGGCTGAACATCGAGAGGCCCTCCTCAGCGGGATCAGCGCCCTGCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437645.5
CDS-3UTR CCA 90 bp CCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTCGGGGCTCTGGTCCCTaGACCCTGAGGCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: PGHRSPANTARGPSAETARGSGP*TLRQPP
Trigger: GGGAGGCTGCCTCAGGGTCCAGGGACCAGAGCCCCG...AGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp AGGTCCAGGGCCTCCAGCCACGCGCCCACAGAGCCAAAGGAGGGGAAGGTGGAGAGGTCCCCACAGCTCTaGGGGTCCAGGAATGTGCGA +
Preference number: 4 (lower is better)
Translates to: RSRASSHAPTEPKEGKVERSPQL*GSRNVR
Trigger: TCGCACATTCCTGGACCCCCAGAGCTGTGGGGACCT...CTCCACCTTCCCCTCCTTTGGCTCTGTGGGCGCGTGGCTGGAGGCCCTGGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp TCAGCCCCTGCCAAGGCACAGGGAGCTGAGGTGGATGCACCTCTGGCCCAGCCCTGGCTATGGTCAAACTaGCCCAGCGTGAGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: SAPAKAQGAEVDAPLAQPWLWSN*PSVRAS
Trigger: CGAGGCCCTCACGCTGGGCCAGTTTGACCATAGCCA...GGGCTGGGCCAGAGGTGCATCCACCTCAGCTCCCTGTGCCTTGGCAGGGGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp GGTCCAGGGCCTCCAGCCACGCGCCCACAGAGCCAAAGGAGGGGAAGGTGGAGATGGCTATGGTCAAACTaGCCCAGCGTGAGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: GPGPPATRPQSQRRGRWRWLWSN*PSVRAS
Trigger: CGAGGCCCTCACGCTGGGCCAGTTTGACCATAGCCA...TCTCCACCTTCCCCTCCTTTGGCTCTGTGGGCGCGTGGCTGGAGGCCCTGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp GGCCACGGCCTCCAGGCTCCCATAGCCAGCAGCCGCGAAGCTGTCCTTGTAGCGTGGCTATGGTCAAACTaGCCCAGCGTGAGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: GHGLQAPIASSREAVLVAWLWSN*PSVRAS
Trigger: CGAGGCCCTCACGCTGGGCCAGTTTGACCATAGCCA...CGCTACAAGGACAGCTTCGCGGCTGCTGGCTATGGGAGCCTGGAGGCCGTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp AGCGGCACAGGTCCAGGGCCTCCAGCCACGCGCCCACAGAGCCAAAGGAGGGGACGCACGATGTGGCTATaGTCAAACTGGCCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: SGTGPGPPATRPQSQRRGRTMWL*SNWPSV
Trigger: CACGCTGGGCCAGTTTGACCATAGCCACATCGTGCG...TCCCCTCCTTTGGCTCTGTGGGCGCGTGGCTGGAGGCCCTGGACCTGTGCCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp AGCGGCACAGGTCCAGGGCCTCCAGCCACGCGCCCACAGAGCCAAAGGAGGGGATCCAGCCGCACGATGTaGCTATGGTCAAACTGGCCC +
Preference number: 4 (lower is better)
Translates to: SGTGPGPPATRPQSQRRGSSRTM*LWSNWP
Trigger: GGGCCAGTTTGACCATAGCCACATCGTGCGGCTGGA...TCCCCTCCTTTGGCTCTGTGGGCGCGTGGCTGGAGGCCCTGGACCTGTGCCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp ACTCGTGCCTGCAGGGCGCTGATCCCGCTGAGGAGGGCCTCTCGATGTTCAGCCAGGCTCACCAGGTCCTaGGCAGTCATCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: TRACRALIPLRRASRCSARLTRS*AVISAT
Trigger: CGTGGCCGAGATGACTGCCCAGGACCTGGTGAGCCT...GGCTGAACATCGAGAGGCCCTCCTCAGCGGGATCAGCGCCCTGCAGGCACGAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp CCATTCCCGGGGGCCCTTGTGGATAAGGAACTCCACGGTGGGCTCAGCACAACCCACCAGGGCCTCTCATaGCCCGGCCTGGCCAGGACT +
Preference number: 4 (lower is better)
Translates to: PFPGALVDKELHGGLSTTHQGLS*PGLART
Trigger: AGTCCTGGCCAGGCCGGGCCATGAGAGGCCCTGGTG...GGTTGTGCTGAGCCCACCGTGGAGTTCCTTATCCACAAGGGCCCCCGGGAATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CCCCTCGTGCCGCCTGAGGAAGCCGTCCAGGGCCCCATGGCTCATGTACTCGGTTTATCCTGCACCCCCTaGCCCTGCAGCTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: PLVPPEEAVQGPMAHVLGLSCTP*PCSWST
Trigger: AGTGCTCCAGCTGCAGGGCCAGGGGGTGCAGGATAA...ACCGAGTACATGAGCCATGGGGCCCTGGACGGCTTCCTCAGGCGGCACGAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000432874.7
CDS-3UTR TCA 90 bp CACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGGGAAACCCCGCCGGCTaGGCGGTCCGATCTCGCGCA +
Preference number: 4 (lower is better)
Translates to: HPCPRGRGQKPFHTSYTMGNPAG*AVRSRA
Trigger: TGCGCGAGATCGGACCGCTCAGCCGGCGGGGTTTCC...CATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR TCA 90 bp GACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAACTGGTCCCTGGACCCTaGGGCAGCCTCCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: DTPVLEEGGRSPSTPAIQLVPGP*GSLPQG
Trigger: ACCCTGGGGGAGGCTGCCTCAGGGTCCAGGGACCAG...TTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp CCCCTCGTGCCGCCTGAGGAAGCCGTCCAGGGCCCCATGGCTCATGTACTCGGTAGATGGTCACTACGGTaGCGACAATGGCGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PLVPPEEAVQGPMAHVLGRWSLR*RQWRGS
Trigger: AGAGCCCCGCCATTGTCGTCACCGTAGTGACCATCT...ACCGAGTACATGAGCCATGGGGCCCTGGACGGCTTCCTCAGGCGGCACGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000437645.5
CDS-3UTR TCA 90 bp ATGCCTAGGCTCACCAGGTCCTGGGCAGTCATCTCGGCCACGGCCTCCAGGCTCCTGAAGTGGCCAAACTaGAGTGTCTCGGGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: MPRLTRSWAVISATASRLLKWPN*SVSGAA
Trigger: GGCCGCTCCCGAGACACTTCAGTTTGGCCACTTCAG...GAGCCTGGAGGCCGTGGCCGAGATGACTGCCCAGGACCTGGTGAGCCTAGGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp TCAGCCCCTGCCAAGGCACAGGGAGCTGAGGTGGATGCACCTCTGGCCCAGCCCAGGCGTTCAGACTCGTaGAAATGGGAGGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SAPAKAQGAEVDAPLAQPRRSDS*KWEGQA
Trigger: TGCCTGCCCCTCCCATTTTCACGAGTCTGAACGCCT...GGGCTGGGCCAGAGGTGCATCCACCTCAGCTCCCTGTGCCTTGGCAGGGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp ACCCTACGAAAGCTCTGGCATACTGGGCCCCACCATTCCCGGGGGCCCTTGTGGTACCCCCAGAGTCACTaGGCTGGGGCAGGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: TLRKLWHTGPHHSRGPLWYPQSH*AGAGAQ
Trigger: CTGAGCACCTGCCCCAGCTCAGTGACTCTGGGGGTA...CCACAAGGGCCCCCGGGAATGGTGGGGCCCAGTATGCCAGAGCTTTCGTAGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp GGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAGCAGTTCCACGAAGATaGGCTGCCCGCGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: GHPCPRGRGQKPFHTSYTAVPRR*AARGHG
Trigger: GCCGTGGCCGCGGGCAGCGCATCTTCGTGGAACTGC...TGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR GCA 90 bp TGGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACCCGCGGCGCCAGGGATaGTGCTGCAGTCACGGAGTG +
Preference number: 4 (lower is better)
Translates to: WTPLSSRKGAEALPHQLYPRRQG*CCSHGV
Trigger: CACTCCGTGACTGCAGCAGCATCCCTGGCGCCGCGG...GTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR GCA 90 bp TGGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACATCCCGCGCTGCAGCTaGAGCGGCCCACAGGCACCA +
Preference number: 4 (lower is better)
Translates to: WTPLSSRKGAEALPHQLYIPRCS*SGPQAP
Trigger: TGGTGCCTGTGGGCCGCTGCAGCTGCAGCGCGGGAT...GTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR GCA 90 bp CTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTGCCTGGAATCCCGCGCTaGAGCTGCAGCGGCCCACAG +
Preference number: 4 (lower is better)
Translates to: LDTEVLPTQPGALLQKQLPGIPR*SCSGPQ
Trigger: CTGTGGGCCGCTGCAGCTGCAGCGCGGGATTCCAGG...CAGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp CACTCCTCAGTGGAGGGGAGATCTACCCTGGACACCGAAGTCCTGCCAACACAGCGGCTCAGGCTGTACTaGAGGTCCCGCGGCGCCGAC +
Preference number: 4 (lower is better)
Translates to: HSSVEGRSTLDTEVLPTQRLRLY*RSRGAD
Trigger: GTCGGCGCCGCGGGACCTGCAGTACAGCCTGAGCCG...CTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGATCTCCCCTCCACTGAGGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp CACCAGGTCCTGGGCAGTCATCTCGGCCACGGCCTCCAGGCTCCCATAGCCAGCCTGTCCCTCAGCATATaGACGGCTACGAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HQVLGSHLGHGLQAPIASLSLSI*TATSSS
Trigger: GGAGCTGCTCGTAGCCGTGCATATGCTGAGGGACAG...GCTGGCTATGGGAGCCTGGAGGCCGTGGCCGAGATGACTGCCCAGGACCTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp CCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTGAGGCGCAGCGGGTGTaGACCGGCGCAGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: PGHRSPANTARGPSAETAEAQRV*TGAGLH
Trigger: ATGGAGACCTGCGCCGGTCCACACCCGCTGCGCCTC...AGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp TGGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACGAGGCGCAGCGGGTGTaGACCGGCGCAGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: WTPLSSRKGAEALPHQLYEAQRV*TGAGLH
Trigger: ATGGAGACCTGCGCCGGTCCACACCCGCTGCGCCTC...GTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR CCA 90 bp CCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTCCCTGTGGGCCGCAGTGCATGCGTaGGGGGCTGCCAGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: PSRADKCHGRPKQTQSLWAAVHA*GAARLP
Trigger: GGGGAGCCTGGCAGCCCCCCACGCATGCACTGCGGC...CCACAGGGACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp ACCCTACGAAAGCTCTGGCATACTGGGCCCCACCATTCCCGGGGGCCCTTGTGGGGCACACGCAGAAGGTaGAGGCGTTTTCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: TLRKLWHTGPHHSRGPLWGTRRR*RRFPGP
Trigger: GGGCCCTGGAAAACGCCTCCACCTTCTGCGTGTGCC...CCACAAGGGCCCCCGGGAATGGTGGGGCCCAGTATGCCAGAGCTTTCGTAGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCGCAGGTGCAGCAGCGTaGCGGCTCGCTCCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: PCPRGRGQKPFHTSYTMIAGAAA*RLAPAA
Trigger: GGCTGCGGGAGCGAGCCGCCACGCTGCTGCACCTGC...GATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR CCA 90 bp CCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTCCCTGTGGGGGCTCCGGCAGGGATaGGCTCCCGCCACGACAGGG +
Preference number: 4 (lower is better)
Translates to: PSRADKCHGRPKQTQSLWGLRQG*APATTG
Trigger: CCCTGTCGTGGCGGGAGCCCATCCCTGCCGGAGCCC...CCACAGGGACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp GGCCACGGCCTCCAGGCTCCCATAGCCAGCAGCCGCGAAGCTGTCCTTGTAGCGAGGGCCTCCTCCAAATaGCCAGCACACTCATCACGG +
Preference number: 4 (lower is better)
Translates to: GHGLQAPIASSREAVLVARASSK*PAHSSR
Trigger: CCGTGATGAGTGTGCTGGCCATTTGGAGGAGGCCCT...CGCTACAAGGACAGCTTCGCGGCTGCTGGCTATGGGAGCCTGGAGGCCGTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp CACTCGTGCCTGCAGGGCGCTGATCCCGCTGAGGAGGGCCTCTCGATGTTCAGCAGGTCCCCACAGCTCTaGGGGTCCAGGAATGTGCGA +
Preference number: 4 (lower is better)
Translates to: HSCLQGADPAEEGLSMFSRSPQL*GSRNVR
Trigger: TCGCACATTCCTGGACCCCCAGAGCTGTGGGGACCT...GCTGAACATCGAGAGGCCCTCCTCAGCGGGATCAGCGCCCTGCAGGCACGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp CACTCCTCAGTGGAGGGGAGATCTACCCTGGACACCGAAGTCCTGCCAACACAGGCAGGGCTGGGGGACTaGACCCCCACCGGAGTCCTG +
Preference number: 4 (lower is better)
Translates to: HSSVEGRSTLDTEVLPTQAGLGD*TPTGVL
Trigger: CAGGACTCCGGTGGGGGTCCAGTCCCCCAGCCCTGC...CTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGATCTCCCCTCCACTGAGGAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp AGGCAGCAACCCCATCAGTTGCCCAGCCACCAGCTGCCCCTCGTGCCGCCTGAGCTCTGCCTTCCTCAGTaGGGGGAGGTTTCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: RQQPHQLPSHQLPLVPPELCLPQ*GEVSKP
Trigger: AGGCTTGGAAACCTCCCCCCACTGAGGAAGGCAGAG...CTCAGGCGGCACGAGGGGCAGCTGGTGGCTGGGCAACTGATGGGGTTGCTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000437645.5
CDS-3UTR TCA 90 bp GCCCAAGGCAGGGGGACACAGAAACCAGATCCTGAGTCTAGGGCTCTTGGGTATGGAAACCCCGCCGGCTaGGCGGTCCGATCTCGCGCA +
Preference number: 4 (lower is better)
Translates to: AQGRGTQKPDPESRALGYGNPAG*AVRSRA
Trigger: TGCGCGAGATCGGACCGCTCAGCCGGCGGGGTTTCC...ATACCCAAGAGCCCTAGACTCAGGATCTGGTTTCTGTGTCCCCCTGCCTTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp ATCTACCCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCAGCGAGTAGGTaGCGTCCGAGCGGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: IYPGHRSPANTARGPSAETAASR*RPSGLP
Trigger: CGGGAGGCCGCTCGGACGTCACCTACTCGCTGCTGT...TTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp AGTCATCTCGGCCACGGCCTCCAGGCTCCCATAGCCAGCAGCCGCGAAGCTGTCAGATGGTCACTACGGTaGCGACAATGGCGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SHLGHGLQAPIASSREAVRWSLR*RQWRGS
Trigger: AGAGCCCCGCCATTGTCGTCACCGTAGTGACCATCT...GACAGCTTCGCGGCTGCTGGCTATGGGAGCCTGGAGGCCGTGGCCGAGATGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp TCAGCCCCTGCCAAGGCACAGGGAGCTGAGGTGGATGCACCTCTGGCCCAGCCCCAGATACTTCATGGCTaGTGCCAGCCCAGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: SAPAKAQGAEVDAPLAQPQILHG*CQPRQQ
Trigger: TTGCTGCCTGGGCTGGCATCAGCCATGAAGTATCTG...GGGCTGGGCCAGAGGTGCATCCACCTCAGCTCCCTGTGCCTTGGCAGGGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp AGGTCCAGGGCCTCCAGCCACGCGCCCACAGAGCCAAAGGAGGGGAAGGTGGAGAGCACTGTGCATTCGTaGAGAAGCGAGGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RSRASSHAPTEPKEGKVESTVHS*RSEGFR
Trigger: CCTGAAGCCCTCGCTTCTTCACGAATGCACAGTGCT...CTCCACCTTCCCCTCCTTTGGCTCTGTGGGCGCGTGGCTGGAGGCCCTGGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432874.7
CDS-3UTR GCA 90 bp TCAGCCCCTGCCAAGGCACAGGGAGCTGAGGTGGATGCACCTCTGGCCCAGCCCTGTTCAGCTTCATCTTaGGCTCACCCAGGTCGCCCT +
Preference number: 4 (lower is better)
Translates to: SAPAKAQGAEVDAPLAQPCSASS*AHPGRP
Trigger: AGGGCGACCTGGGTGAGCGCAAGATGAAGCTGAACA...GGGCTGGGCCAGAGGTGCATCCACCTCAGCTCCCTGTGCCTTGGCAGGGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp ACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGGCTCCCCTTCCGAGTaGGCCACGCACGTTCCGGCC +
Preference number: 4 (lower is better)
Translates to: TPLSSRKGAEALPHQLYNGSPSE*ATHVPA
Trigger: GGCCGGAACGTGCGTGGCGCACTCGGAAGGGGAGCC...ATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR GCA 90 bp ATCTACCCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAATCCCGCGCTGCAGCTaGAGCGGCCCACAGGCACCA +
Preference number: 4 (lower is better)
Translates to: IYPGHRSPANTARGPSAEIPRCS*SGPQAP
Trigger: TGGTGCCTGTGGGCCGCTGCAGCTGCAGCGCGGGAT...TTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp CACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGCCTGGAATCCCGCGCTaGAGCTGCAGCGGCCCACAG +
Preference number: 4 (lower is better)
Translates to: HPCPRGRGQKPFHTSYTMPGIPR*SCSGPQ
Trigger: CTGTGGGCCGCTGCAGCTGCAGCGCGGGATTCCAGG...CATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR GCA 90 bp GACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATCCAGGGCCCGGCTGTaGTCTGGGCACGGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: DTPVLEEGGRSPSTPAIQSRARL*SGHGEQ
Trigger: CTGCTCACCGTGCCCAGAGCACAGCCGGGCCCTGGA...TTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR GCA 90 bp ACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATCGGCTCAGGCTGTACTaGAGGTCCCGCGGCGCCGAC +
Preference number: 4 (lower is better)
Translates to: TPLSSRKGAEALPHQLYNRLRLY*RSRGAD
Trigger: GTCGGCGCCGCGGGACCTGCAGTACAGCCTGAGCCG...ATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR GCA 90 bp AAGGTCGCTGCTGACCAGCACATGGCGAGCTGCCAGGCCCCGGTGAACGTAGCCCTGTCCCTCAGCATATaGACGGCTACGAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KVAADQHMASCQAPVNVALSLSI*TATSSS
Trigger: GGAGCTGCTCGTAGCCGTGCATATGCTGAGGGACAG...GGCTACGTTCACCGGGGCCTGGCAGCTCGCCATGTGCTGGTCAGCAGCGACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000437645.5
CDS-3UTR GCA 90 bp CACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGACCAGCTGCCCCTCGTaGCGCCTGAGGAAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: HPCPRGRGQKPFHTSYTMTSCPS*RLRKPS
Trigger: GGACGGCTTCCTCAGGCGGCACGAGGGGCAGCTGGT...CATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp GATGATGCGAAGAGAGAGTGGGAAGATGGCCACAGGCAAGCCGGGGAGAGAGGCTGGAGCACTCGTGCCTaGAGGGCGCTGATCCCGCTG +
Preference number: 4 (lower is better)
Translates to: DDAKREWEDGHRQAGERGWSTRA*RALIPL
Trigger: CAGCGGGATCAGCGCCCTGCAGGCACGAGTGCTCCA...GCCTCTCTCCCCGGCTTGCCTGTGGCCATCTTCCCACTCTCTCTTCGCATCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp TCAGCCCCTGCCAAGGCACAGGGAGCTGAGGTGGATGCACCTCTGGCCCAGCCCAGCACCATCTTTGCCTaGCTGAGCCTTGGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: SAPAKAQGAEVDAPLAQPSTIFA*LSLGQC
Trigger: ACACTGGCCAAGGCTCAGGCAGGCAAAGATGGTGCT...GGGCTGGGCCAGAGGTGCATCCACCTCAGCTCCCTGTGCCTTGGCAGGGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTCCCTGTGGCGCTCTCGGCTGCGGTaGCTGGGAACGTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PSRADKCHGRPKQTQSLWRSRLR*LGTWPG
Trigger: GCCTGGCCACGTTCCCAGCCACCGCAGCCGAGAGCG...CCACAGGGACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp ACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATTCCCGCAGCCCTGCCTaGCGCGGTAGGAAGGCCACG +
Preference number: 4 (lower is better)
Translates to: TPLSSRKGAEALPHQLYNSRSPA*RGRKAT
Trigger: CGTGGCCTTCCTACCGCGCCAGGCAGGGCTGCGGGA...ATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR CCA 90 bp CTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTGCGTACTCCGTGTCATTaGCCCCAGGGGCTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: LDTEVLPTQPGALLQKQLRTPCH*PQGLRQ
Trigger: CTGCCGGAGCCCCTGGGGCCAATGACACGGAGTACG...CAGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp TGGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACCGTACTCCGTGTCATTaGCCCCAGGGGCTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: WTPLSSRKGAEALPHQLYRTPCH*PQGLRQ
Trigger: CTGCCGGAGCCCCTGGGGCCAATGACACGGAGTACG...GTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000427468.6
ENST00000437645.5
CDS-3UTR CCA 90 bp GGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAGCTACGAGCAGCTCCTaGCGACCGGGGAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: GHPCPRGRGQKPFHTSYTATSSS*RPGSCK
Trigger: CTTGCAGCTCCCCGGTCGCCAGGAGCTGCTCGTAGC...TGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp TGGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACCCTGGGCCGCTCACCTaGGTCCTTCTGCCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: WTPLSSRKGAEALPHQLYPGPLT*VLLPAV
Trigger: GACTGCTGGCAGAAGGACCCAGGTGAGCGGCCCAGG...GTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR CCA 90 bp CCATTCCCGGGGGCCCTTGTGGATAAGGAACTCCACGGTGGGCTCAGCACAACCCACAGGGAGCTGAGGTaGATGCACCTCTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PFPGALVDKELHGGLSTTHRELR*MHLWPS
Trigger: GCTGGGCCAGAGGTGCATCCACCTCAGCTCCCTGTG...GGTTGTGCTGAGCCCACCGTGGAGTTCCTTATCCACAAGGGCCCCCGGGAATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp ACCCTACGAAAGCTCTGGCATACTGGGCCCCACCATTCCCGGGGGCCCTTGTGGTCTCATGGCCCGGCCTaGCCAGGACTTTTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: TLRKLWHTGPHHSRGPLWSHGPA*PGLLAS
Trigger: TGAGGCCAAAAGTCCTGGCCAGGCCGGGCCATGAGA...CCACAAGGGCCCCCGGGAATGGTGGGGCCCAGTATGCCAGAGCTTTCGTAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp ATCTACCCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAACCCAAGGCACGGAGCTaGCTGGAGGGGAGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: IYPGHRSPANTARGPSAEPKARS*LEGSRL
Trigger: GAGGCGACTCCCCTCCAGCCAGCTCCGTGCCTTGGG...TTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp TCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTTCCCACGGGGAAGGCGGATCCTaGAGGGCACCTGGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: SCLPKTPPTPRKEPSLSHGEGGS*RAPGRG
Trigger: CCCCCGGCCAGGTGCCCTCCAGGATCCGCCTTCCCC...GTGGGAAAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CACTCGTGCCTGCAGGGCGCTGATCCCGCTGAGGAGGGCCTCTCGATGTTCAGCAAGCCAGGGACTTTCTaGGTGGAGGGTGGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: HSCLQGADPAEEGLSMFSKPGTF*VEGGLG
Trigger: ACCAAGCCCACCCTCCACCCAGAAAGTCCCTGGCTT...GCTGAACATCGAGAGGCCCTCCTCAGCGGGATCAGCGCCCTGCAGGCACGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432874.7
CDS-3UTR CCA 90 bp GGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAGGTCCGCTAGTGGGGTaGGAGGCCTGGGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: GHPCPRGRGQKPFHTSYTGPLVG*EAWVLL
Trigger: CAGAAGGACCCAGGCCTCCCACCCCACTAGCGGACC...TGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp CTGCCATCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTCCAGGTCGCCCTGCGTaGAGCTCTCGTCCGCCGCGA +
Preference number: 4 (lower is better)
Translates to: LPSCLPKTPPTPRKEPSLPGRPA*SSRPPR
Trigger: TCGCGGCGGACGAGAGCTTCACGCAGGGCGACCTGG...AAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGATGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp CAGAGAATGACTGATGTAGCTGGAGATGAGGACGAGGCTCCATCCACCCAAGAAGTGCTCTGGGCACGGTaGGCAGAGGGGCCGCCGCGG +
Preference number: 4 (lower is better)
Translates to: QRMTDVAGDEDEAPSTQEVLWAR*AEGPPR
Trigger: CCGCGGCGGCCCCTCTGCTCACCGTGCCCAGAGCAC...TTCTTGGGTGGATGGAGCCTCGTCCTCATCTCCAGCTACATCAGTCATTCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp TCTGGGCTCTTTCTCATGCTAGCCTCTCTGCATGGACTCCTTTTGTCCGAGGCCGGGCGGGTCGGTGGGTaGGCGCGCATAGCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SGLFLMLASLHGLLLSEAGRVGG*ARIAVL
Trigger: CAGGACAGCTATGCGCGCTCACCCACCGACCCGCCC...GGCCTCGGACAAAAGGAGTCCATGCAGAGAGGCTAGCATGAGAAAGAGCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp CCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCGCCCGGTGGAGACGGTaGCCTGCGCGTAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: PCPRGRGQKPFHTSYTMIARWRR*PARRWF
Trigger: GAACCACCTACGCGCAGGTCACCGTCTCCACCGGGC...GATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR TCA 90 bp ACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATCAAACTGGCCCAGCGTaGGGGCCTCGGCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: TPLSSRKGAEALPHQLYNQTGPA*GPRPGS
Trigger: GCTTCCTGGCCGAGGCCCTCACGCTGGGCCAGTTTG...ATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp TCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTTCCCACGGTGTAGACAGCCTCTaGTCGGTCCCGGGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: SCLPKTPPTPRKEPSLSHGVDSL*SVPGAP
Trigger: CGGGGCCCCCGGGACCGATCAGAGGCTGTCTACACC...GTGGGAAAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp GTCCTTGTAGCGGCACAGGTCCAGGGCCTCCAGCCACGCGCCCACAGAGCCAAACATCCTCCACAGCCTTaGTCACGTCTTGGCCAGACA +
Preference number: 4 (lower is better)
Translates to: VLVAAQVQGLQPRAHRAKHPPQP*SRLGQT
Trigger: TGTCTGGCCAAGACGTGATCAAGGCTGTGGAGGATG...TTTGGCTCTGTGGGCGCGTGGCTGGAGGCCCTGGACCTGTGCCGCTACAAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp CCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTTCCCTGTGGCCCTGCTaGGATCCAGCTGCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PGHRSPANTARGPSAETASLWPC*DPAAFL
Trigger: CAGGAAGGCAGCTGGATCTCAGCAGGGCCACAGGGA...AGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp CTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTGACATCTGTGCAGGGCTaGGGCCTGGGACCCAACAGG +
Preference number: 4 (lower is better)
Translates to: LDTEVLPTQPGALLQKQLTSVQG*GLGPNR
Trigger: CCTGTTGGGTCCCAGGCCTCAGCCCTGCACAGATGT...CAGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp CACCAGGTCCTGGGCAGTCATCTCGGCCACGGCCTCCAGGCTCCCATAGCCAGCTCCACAGAGGGAAGATaGTGCGAAGAGAGAGTGGGA +
Preference number: 4 (lower is better)
Translates to: HQVLGSHLGHGLQAPIASSTEGR*CEERVG
Trigger: TCCCACTCTCTCTTCGCATCATCTTCCCTCTGTGGA...GCTGGCTATGGGAGCCTGGAGGCCGTGGCCGAGATGACTGCCCAGGACCTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000534097.5
CDS-3UTR GCA 90 bp CTGCCATCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTGGCTCCCCTTCCGAGTaGGCCACGCACGTTCCGGCC +
Preference number: 4 (lower is better)
Translates to: LPSCLPKTPPTPRKEPSLGSPSE*ATHVPA
Trigger: GGCCGGAACGTGCGTGGCGCACTCGGAAGGGGAGCC...AAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGATGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp GGCTCCCATAGCCAGCAGCCGCGAAGCTGTCCTTGTAGCGGCACAGGTCCAGGGCTCCTTTGCCATAGCTaGAGGGCCTCCTCCAAATGG +
Preference number: 4 (lower is better)
Translates to: GSHSQQPRSCPCSGTGPGLLCHS*RASSKW
Trigger: CCATTTGGAGGAGGCCCTGCAGCTATGGCAAAGGAG...CCCTGGACCTGTGCCGCTACAAGGACAGCTTCGCGGCTGCTGGCTATGGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp GTCCTTGTAGCGGCACAGGTCCAGGGCCTCCAGCCACGCGCCCACAGAGCCAAACTCCTTTGCCATAGCTaGAGGGCCTCCTCCAAATGG +
Preference number: 4 (lower is better)
Translates to: VLVAAQVQGLQPRAHRAKLLCHS*RASSKW
Trigger: CCATTTGGAGGAGGCCCTGCAGCTATGGCAAAGGAG...TTTGGCTCTGTGGGCGCGTGGCTGGAGGCCCTGGACCTGTGCCGCTACAAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp GACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGGCGACCGGGGAGCTaGAAGCAGCCACAGCACAGC +
Preference number: 4 (lower is better)
Translates to: DTPVLEEGGRSPSTPAIQWRPGS*KQPQHS
Trigger: GCTGTGCTGTGGCTGCTTGCAGCTCCCCGGTCGCCA...TTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp TCAGCCCCTGCCAAGGCACAGGGAGCTGAGGTGGATGCACCTCTGGCCCAGCCCGTTCAGCCAAAGAGATaGCTAGGCTCACCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: SAPAKAQGAEVDAPLAQPVQPKR*LGSPGP
Trigger: AGGACCTGGTGAGCCTAGGCATCTCTTTGGCTGAAC...GGGCTGGGCCAGAGGTGCATCCACCTCAGCTCCCTGTGCCTTGGCAGGGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp CCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTCCCTGTGGGGGTCCACTCACACCTaGACCCCCTGGCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PSRADKCHGRPKQTQSLWGSTHT*TPWPCS
Trigger: GCTGCAGGGCCAGGGGGTGCAGGTGTGAGTGGACCC...CCACAGGGACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTCCCTGTGGCCAGGCCCCGCACGGTaGCGCGGCACTGCTTGTAGT +
Preference number: 4 (lower is better)
Translates to: PSRADKCHGRPKQTQSLWPGPAR*RGTACS
Trigger: ACTACAAGCAGTGCCGCGCCACCGTGCGGGGCCTGG...CCACAGGGACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp ACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATCCAGGCCCCGCACGGTaGCGCGGCACTGCTTGTAGT +
Preference number: 4 (lower is better)
Translates to: TPLSSRKGAEALPHQLYNPGPAR*RGTACS
Trigger: ACTACAAGCAGTGCCGCGCCACCGTGCGGGGCCTGG...ATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR CCA 90 bp CGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCTCGGCTGCGGTGGCTaGGAACGTGGCCAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: RGRGQKPFHTSYTMIKQLLGCGG*ERGQAP
Trigger: CGGGGCCTGGCCACGTTCCCAGCCACCGCAGCCGAG...CAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR CCA 90 bp CGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGGCCGCAGTGCATGCGTaGGGGGCTGCCAGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: RGRGQKPFHTSYTMIKQLAAVHA*GAARLP
Trigger: GGGGAGCCTGGCAGCCCCCCACGCATGCACTGCGGC...CAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR CCA 90 bp CGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGGGGCTCCGGCAGGGATaGGCTCCCGCCACGACAGGG +
Preference number: 4 (lower is better)
Translates to: RGRGQKPFHTSYTMIKQLGLRQG*APATTG
Trigger: CCCTGTCGTGGCGGGAGCCCATCCCTGCCGGAGCCC...CAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427468.6
ENST00000437645.5
CDS-3UTR CCA 90 bp TCAGCAGGAAACAACCTTGCGCACATCTTGATCTTGGCTTCCAGCCTCCAGAGCGGGCTCCGGCAGGGATaGGCTCCCGCCACGACAGGG +
Preference number: 4 (lower is better)
Translates to: SAGNNLAHILILASSLQSGLRQG*APATTG
Trigger: CCCTGTCGTGGCGGGAGCCCATCCCTGCCGGAGCCC...GCTCTGGAGGCTGGAAGCCAAGATCAAGATGTGCGCAAGGTTGTTTCCTGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437645.5
CDS-3UTR CCA 90 bp GGAGTAAGTCTGCTCACTCTGACCGGGGAAAAGAGCAGATTGGGATGTGACTCCGGGCTCCGGCAGGGATaGGCTCCCGCCACGACAGGG +
Preference number: 4 (lower is better)
Translates to: GVSLLTLTGEKSRLGCDSGLRQG*APATTG
Trigger: CCCTGTCGTGGCGGGAGCCCATCCCTGCCGGAGCCC...GGAGTCACATCCCAATCTGCTCTTTTCCCCGGTCAGAGTGAGCAGACTTACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525749.1
CDS-3UTR CCA 90 bp GGAAACAACCTTGCGCACATCTTGATCTTGGCTTCCAGCCTCCAGAGCTGTGGGCGGGGCTCTGGTCCCTaGACCCTGAGGCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: GNNLAHILILASSLQSCGRGSGP*TLRQPP
Trigger: GGGAGGCTGCCTCAGGGTCCAGGGACCAGAGCCCCG...CCCACAGCTCTGGAGGCTGGAAGCCAAGATCAAGATGTGCGCAAGGTTGTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp TGGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACACAATGGCGGGGCTCTaGTCCCTGGACCCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: WTPLSSRKGAEALPHQLYTMAGL*SLDPEA
Trigger: TGCCTCAGGGTCCAGGGACCAGAGCCCCGCCATTGT...GTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp CACTCCTCAGTGGAGGGGAGATCTACCCTGGACACCGAAGTCCTGCCAACACAGGCTACGAGCAGCTCCTaGCGACCGGGGAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: HSSVEGRSTLDTEVLPTQATSSS*RPGSCK
Trigger: CTTGCAGCTCCCCGGTCGCCAGGAGCTGCTCGTAGC...CTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGATCTCCCCTCCACTGAGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CACCAGGTCCTGGGCAGTCATCTCGGCCACGGCCTCCAGGCTCCCATAGCCAGCCTGACAGATACTTCATaGCTGATGCCAGCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: HQVLGSHLGHGLQAPIASLTDTS*LMPAQA
Trigger: TGCCTGGGCTGGCATCAGCCATGAAGTATCTGTCAG...GCTGGCTATGGGAGCCTGGAGGCCGTGGCCGAGATGACTGCCCAGGACCTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp ATCTACCCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAACACACCTGCACCCCCTaGCCCTGCAGCTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: IYPGHRSPANTARGPSAEHTCTP*PCSWST
Trigger: AGTGCTCCAGCTGCAGGGCCAGGGGGTGCAGGTGTG...TTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTGGCTCCATGGAAGGCTaGGTAGTGCCCAAGGCACGG +
Preference number: 4 (lower is better)
Translates to: PGHRSPANTARGPSAETAGSMEG*VVPKAR
Trigger: CCGTGCCTTGGGCACTACCCAGCCTTCCATGGAGCC...AGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CCATTCCCGGGGGCCCTTGTGGATAAGGAACTCCACGGTGGGCTCAGCACAACCAAAGCTCTGGCATACTaGGCCCCACCATTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: PFPGALVDKELHGGLSTTKALAY*APPFPG
Trigger: CCCCGGGAATGGTGGGGCCCAGTATGCCAGAGCTTT...GGTTGTGCTGAGCCCACCGTGGAGTTCCTTATCCACAAGGGCCCCCGGGAATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTAGGGAGGCAGGGGGCTaGGGGGAGATTCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: PGHRSPANTARGPSAETAREAGG*GEIPRA
Trigger: TGCTCTTGGAATCTCCCCCCAGCCCCCTGCCTCCCT...AGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp GAGATCTTGCAGACAAGGTCGCTGCTGACCAGCACATGGCGAGCTGCCAGGCCCTTTCTGGGTGGAGGGTaGGCTTGGTGTGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: EILQTRSLLTSTWRAARPFLGGG*AWCGGR
Trigger: CCTGCCTCCACACCAAGCCCACCCTCCACCCAGAAA...GGGCCTGGCAGCTCGCCATGTGCTGGTCAGCAGCGACCTTGTCTGCAAGATCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432874.7
CDS-3UTR CCA 90 bp CTGAGGAGGGCCTCTCGATGTTCAGCCAAAGAGATGCCTAGGCTCACCAGGTCCGTGGGGTGGGAGGCCTaGGTCCTTCTGCCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: LRRASRCSAKEMPRLTRSVGWEA*VLLPAV
Trigger: GACTGCTGGCAGAAGGACCCAGGCCTCCCACCCCAC...GGACCTGGTGAGCCTAGGCATCTCTTTGGCTGAACATCGAGAGGCCCTCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437645.5
ENST00000534097.5
3UTR CAA 72 bp CTCTGGCATACTGGGCCCCACCATTCCCGGGGGCCCTaGTGGATAAGGAACTCCACGGTGGGCTCAGCACAA +
Preference number: 4 (lower is better)
Translates to: LWHTGPHHSRGP*WIRNSTVGSAQ
Trigger: TTGTGCTGAGCCCACCGTGGAGTTCCTTATCCACAAGGGCCCCCGGGAATGGTGGGGCCCAGTATGCCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp CCATTCCCGGGGGCCCTTGTGGATAAGGAACTCCACGGTGGGCTCAGCACAACCGTTCATCCACGCCGCTaGTCTCCTCCCACCCATTAC +
Preference number: 4 (lower is better)
Translates to: PFPGALVDKELHGGLSTTVHPRR*SPPTHY
Trigger: GTAATGGGTGGGAGGAGATCAGCGGCGTGGATGAAC...GGTTGTGCTGAGCCCACCGTGGAGTTCCTTATCCACAAGGGCCCCCGGGAATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp CGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCAGGTCGCCCTGCGTaGAGCTCTCGTCCGCCGCGA +
Preference number: 4 (lower is better)
Translates to: RGRGQKPFHTSYTMIKQLPGRPA*SSRPPR
Trigger: TCGCGGCGGACGAGAGCTTCACGCAGGGCGACCTGG...CAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR TCA 90 bp CGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGGGGCGGGTCGGTGGGTaGGCGCGCATAGCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: RGRGQKPFHTSYTMIKQLGRVGG*ARIAVL
Trigger: CAGGACAGCTATGCGCGCTCACCCACCGACCCGCCC...CAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR TCA 90 bp CTGCCATCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTGCCCGGTGGAGACGGTaGCCTGCGCGTAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: LPSCLPKTPPTPRKEPSLARWRR*PARRWF
Trigger: GAACCACCTACGCGCAGGTCACCGTCTCCACCGGGC...AAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGATGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp AGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCCTGGTCCCTGGACCCTaGGGCAGCCTCCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: RGQKPFHTSYTMIKQLPLLVPGP*GSLPQG
Trigger: ACCCTGGGGGAGGCTGCCTCAGGGTCCAGGGACCAG...GAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp AATCCCTCTATGCAGAGAGATCTCAGACGCAGATTCTGGACACCCCTGTCCTCGCTGGTCCCTGGACCCTaGGGCAGCCTCCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: NPSMQRDLRRRFWTPLSSLVPGP*GSLPQG
Trigger: ACCCTGGGGGAGGCTGCCTCAGGGTCCAGGGACCAG...CGAGGACAGGGGTGTCCAGAATCTGCGTCTGAGATCTCTCTGCATAGAGGGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp TCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTTCCCACGGGAGGGGCAGGCAGTaGAAGCGGGGAAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SCLPKTPPTPRKEPSLSHGRGRQ*KRGSCG
Trigger: GCCACAGCTTCCCCGCTTTCACTGCCTGCCCCTCCC...GTGGGAAAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp CAGAGAATGACTGATGTAGCTGGAGATGAGGACGAGGCTCCATCCACCCAAGAACCAGCCCCCGACGCCTaGGCCACCAGGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: QRMTDVAGDEDEAPSTQEPAPDA*ATRQLQ
Trigger: CTGCAGCTGCCTGGTGGCTCAGGCGTCGGGGGCTGG...TTCTTGGGTGGATGGAGCCTCGTCCTCATCTCCAGCTACATCAGTCATTCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp CACTCCTCAGTGGAGGGGAGATCTACCCTGGACACCGAAGTCCTGCCAACACAGCAAGGCACAGGGAGCTaGGGTGGATGCACCTCTGGC +
Preference number: 4 (lower is better)
Translates to: HSSVEGRSTLDTEVLPTQQGTGS*GGCTSG
Trigger: GCCAGAGGTGCATCCACCTCAGCTCCCTGTGCCTTG...CTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGATCTCCCCTCCACTGAGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp CCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTCCTCAGCTCTGCTCCTaGCTCCTCACTTGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PGHRSPANTARGPSAETAPQLCS*LLTWPQ
Trigger: CTGAGGCCAAGTGAGGAGTCAGGAGCAGAGCTGAGG...AGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp AAGGTGGAGAAGGCACGGTCCGCTAGTGGGGTGGGAGGCCTGGGTCCTTCTGCCGGCATAGAGGGAAGATaGTGCGAAGAGAGAGTGGGA +
Preference number: 4 (lower is better)
Translates to: KVEKARSASGVGGLGPSAGIEGR*CEERVG
Trigger: TCCCACTCTCTCTTCGCATCATCTTCCCTCTATGCC...GGCAGAAGGACCCAGGCCTCCCACCCCACTAGCGGACCGTGCCTTCTCCACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437645.5
CDS-3UTR GCA 90 bp GACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAACGATCGTGTCGATTTTaGGGGGCCGGCTGCCGCCTA +
Preference number: 4 (lower is better)
Translates to: DTPVLEEGGRSPSTPAIQRSCRF*GAGCRL
Trigger: TAGGCGGCAGCCGGCCCCGCAAAATCGACACGATCG...TTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR GCA 90 bp CCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTCATCCCCTCCTCCTTTaGCATAGCTGCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PGHRSPANTARGPSAETAHPLLL*HSCRAS
Trigger: GGAGGCCCTGCAGCTATGGCAAAGGAGGAGGGGATG...AGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp TGGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACCATCCCCTCCTCCTTTaGCATAGCTGCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: WTPLSSRKGAEALPHQLYHPLLL*HSCRAS
Trigger: GGAGGCCCTGCAGCTATGGCAAAGGAGGAGGGGATG...GTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp TCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTTCCCACACCAGCTGCCCCTCGTaGCGCCTGAGGAAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: SCLPKTPPTPRKEPSLSHTSCPS*RLRKPS
Trigger: GGACGGCTTCCTCAGGCGGCACGAGGGGCAGCTGGT...GTGGGAAAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp GGAAACAACCTTGCGCACATCTTGATCTTGGCTTCCAGCCTCCAGAGCTGTGGGACCAGCTGCCCCTCGTaGCGCCTGAGGAAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: GNNLAHILILASSLQSCGTSCPS*RLRKPS
Trigger: GGACGGCTTCCTCAGGCGGCACGAGGGGCAGCTGGT...CCCACAGCTCTGGAGGCTGGAAGCCAAGATCAAGATGTGCGCAAGGTTGTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp AGATGCCTAGGCTCACCAGGTCCTGGGCAGTCATCTCGGCCACGGCCTCCAGGCGTTCAGCCAAAGAGATaGCTAGGCTCACCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: RCLGSPGPGQSSRPRPPGVQPKR*LGSPGP
Trigger: AGGACCTGGTGAGCCTAGGCATCTCTTTGGCTGAAC...GCCTGGAGGCCGTGGCCGAGATGACTGCCCAGGACCTGGTGAGCCTAGGCATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp CCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTCCCTGTGGTGGAGCACTCGTGCCTaGAGGGCGCTGATCCCGCTG +
Preference number: 4 (lower is better)
Translates to: PSRADKCHGRPKQTQSLWWSTRA*RALIPL
Trigger: CAGCGGGATCAGCGCCCTGCAGGCACGAGTGCTCCA...CCACAGGGACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp GCCCAAGGCAGGGGGACACAGAAACCAGATCCTGAGTCTAGGGCTCTTGGGTATCGCTCCCTCCCACACTaGTGGAGCGCAGCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: AQGRGTQKPDPESRALGYRSLPH*WSAACH
Trigger: GTGGCAAGCTGCGCTCCAGCAGTGTGGGAGGGAGCG...ATACCCAAGAGCCCTAGACTCAGGATCTGGTTTCTGTGTCCCCCTGCCTTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp AAGAGAGAGAATGAGAGGTCTGTTCCTAATGCCCCCACTAGCCTGAGAACCCAGCTCGGCTGCGGTGGCTaGGAACGTGGCCAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: KRENERSVPNAPTSLRTQLGCGG*ERGQAP
Trigger: CGGGGCCTGGCCACGTTCCCAGCCACCGCAGCCGAG...CTGGGTTCTCAGGCTAGTGGGGGCATTAGGAACAGACCTCTCATTCTCTCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR CCA 90 bp GGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAAAGTCACCACGCTCCTaGAATCCCGCGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GHPCPRGRGQKPFHTSYTKSPRS*NPALQL
Trigger: CAGCTGCAGCGCGGGATTCCAGGAGCGTGGTGACTT...TGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR CCA 90 bp GACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAAGACAGGGACACGCTCTaGGGTTCCACTCGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: DTPVLEEGGRSPSTPAIQDRDTL*GSTRSL
Trigger: CAGGGACCGAGTGGAACCCCAGAGCGTGTCCCTGTC...TTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427468.6
ENST00000437645.5
CDS-3UTR CCA 90 bp GCCAGAGATCTTGCAGACAAGGTCGCTGCTGACCAGCACATGGCGAGCTGCCAGCTGGGGTTAAAACTCTaGGCCTCCCAGGATGGCCCC +
Preference number: 4 (lower is better)
Translates to: ARDLADKVAADQHMASCQLGLKL*ASQDGP
Trigger: GGGGCCATCCTGGGAGGCCCAGAGTTTTAACCCCAG...CTGGCAGCTCGCCATGTGCTGGTCAGCAGCGACCTTGTCTGCAAGATCTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000437645.5
CDS-3UTR CCA 90 bp CCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTAGGTCCCCACAGCTCTaGGGGTCCAGGAATGTGCGA +
Preference number: 4 (lower is better)
Translates to: PGHRSPANTARGPSAETARSPQL*GSRNVR
Trigger: TCGCACATTCCTGGACCCCCAGAGCTGTGGGGACCT...AGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp TGGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAGGTCCCCACAGCTCTaGGGGTCCAGGAATGTGCGA +
Preference number: 4 (lower is better)
Translates to: WTPLSSRKGAEALPHQLYRSPQL*GSRNVR
Trigger: TCGCACATTCCTGGACCCCCAGAGCTGTGGGGACCT...GTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp AGATGCCTAGGCTCACCAGGTCCTGGGCAGTCATCTCGGCCACGGCCTCCAGGCTCGCATCCAGTTCCTTaGCGAACAGATGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: RCLGSPGPGQSSRPRPPGSHPVP*RTDAQP
Trigger: AGGCTGTGCATCTGTTCGCCAAGGAACTGGATGCGA...GCCTGGAGGCCGTGGCCGAGATGACTGCCCAGGACCTGGTGAGCCTAGGCATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp TGGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACTGGCTATGGTCAAACTaGCCCAGCGTGAGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: WTPLSSRKGAEALPHQLYWLWSN*PSVRAS
Trigger: CGAGGCCCTCACGCTGGGCCAGTTTGACCATAGCCA...GTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp ACCCTACGAAAGCTCTGGCATACTGGGCCCCACCATTCCCGGGGGCCCTTGTGGACCCTACGAAAGCTCTaGCATACTGGGCCCCACCAT +
Preference number: 4 (lower is better)
Translates to: TLRKLWHTGPHHSRGPLWTLRKL*HTGPHH
Trigger: ATGGTGGGGCCCAGTATGCCAGAGCTTTCGTAGGGT...CCACAAGGGCCCCCGGGAATGGTGGGGCCCAGTATGCCAGAGCTTTCGTAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp ACCCTACGAAAGCTCTGGCATACTGGGCCCCACCATTCCCGGGGGCCCTTGTGGGTGGTAGCAACATCTTaGTCTCCCCAGTACCCCCAG +
Preference number: 4 (lower is better)
Translates to: TLRKLWHTGPHHSRGPLWVVATS*SPQYPQ
Trigger: CTGGGGGTACTGGGGAGACCAAGATGTTGCTACCAC...CCACAAGGGCCCCCGGGAATGGTGGGGCCCAGTATGCCAGAGCTTTCGTAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp ACACACAGCCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTATCCTGGAGGGCACCTaGCCGGGGGCTCCCCCAACC +
Preference number: 4 (lower is better)
Translates to: THSQAEQTSVTGGLNKLSILEGT*PGAPPT
Trigger: GGTTGGGGGAGCCCCCGGCCAGGTGCCCTCCAGGAT...ACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGGCTGTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CTGAGGAGGGCCTCTCGATGTTCAGCCAAAGAGATGCCTAGGCTCACCAGGTCCATCACCTGCACCCCCTaGCCCTGCAGCTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: LRRASRCSAKEMPRLTRSITCTP*PCSWST
Trigger: AGTGCTCCAGCTGCAGGGCCAGGGGGTGCAGGTGAT...GGACCTGGTGAGCCTAGGCATCTCTTTGGCTGAACATCGAGAGGCCCTCCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp TGGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAGATGGTCACTACGGTaGCGACAATGGCGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: WTPLSSRKGAEALPHQLYRWSLR*RQWRGS
Trigger: AGAGCCCCGCCATTGTCGTCACCGTAGTGACCATCT...GTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp GGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAGGCTCCTCTCCAGCGTaGCGCTTTTCGCATCCAGTT +
Preference number: 4 (lower is better)
Translates to: GHPCPRGRGQKPFHTSYTGSSPA*RFSHPV
Trigger: AACTGGATGCGAAAAGCGTCACGCTGGAGAGGAGCC...TGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp TCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTTCCCACGAAGCCGAGCCTCTGTaGGTCGGAGGCGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: SCLPKTPPTPRKEPSLSHEAEPL*VGGAVP
Trigger: AGGGACAGCGCCTCCGACTCACAGAGGCTCGGCTTC...GTGGGAAAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp GCTCCCCTCACAGCTCTCAGCAGGAAACAACCTTGCGCACATCTTGATCTTGGCGAAGCCGAGCCTCTGTaGGTCGGAGGCGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: APLTALSRKQPCAHLDLGEAEPL*VGGAVP
Trigger: AGGGACAGCGCCTCCGACTCACAGAGGCTCGGCTTC...GCCAAGATCAAGATGTGCGCAAGGTTGTTTCCTGCTGAGAGCTGTGAGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp GACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAAAGACAAGGTCGCTGCTaGCCAGCACATGGCGAGCTG +
Preference number: 4 (lower is better)
Translates to: DTPVLEEGGRSPSTPAIQRQGRC*PAHGEL
Trigger: CAGCTCGCCATGTGCTGGTCAGCAGCGACCTTGTCT...TTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp CTGAGGAGGGCCTCTCGATGTTCAGCCAAAGAGATGCCTAGGCTCACCAGGTCCAGACAAGGTCGCTGCTaGCCAGCACATGGCGAGCTG +
Preference number: 4 (lower is better)
Translates to: LRRASRCSAKEMPRLTRSRQGRC*PAHGEL
Trigger: CAGCTCGCCATGTGCTGGTCAGCAGCGACCTTGTCT...GGACCTGGTGAGCCTAGGCATCTCTTTGGCTGAACATCGAGAGGCCCTCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp CCCCGCCCGAAGCCAGAGATCTTGCAGACAAGGTCGCTGCTGACCAGCACATGGCATCCTCCACAGCCTTaGTCACGTCTTGGCCAGACA +
Preference number: 4 (lower is better)
Translates to: PRPKPEILQTRSLLTSTWHPPQP*SRLGQT
Trigger: TGTCTGGCCAAGACGTGATCAAGGCTGTGGAGGATG...CCATGTGCTGGTCAGCAGCGACCTTGTCTGCAAGATCTCTGGCTTCGGGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000437645.5
CDS-3UTR TCA 90 bp ATCTACCCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAACCATCTTTGCCTGCCTaGGCCTTGGCCAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: IYPGHRSPANTARGPSAEPSLPA*ALASVQ
Trigger: CTGGACACTGGCCAAGGCTCAGGCAGGCAAAGATGG...TTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp GACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAACCCATTACTTGGCAGTaGAGTCCAGCCCAGCTCGGC +
Preference number: 4 (lower is better)
Translates to: DTPVLEEGGRSPSTPAIQPITWQ*SPAQLG
Trigger: GCCGAGCTGGGCTGGACTGCACTGCCAAGTAATGGG...TTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR GCA 90 bp GCCCAAGGCAGGGGGACACAGAAACCAGATCCTGAGTCTAGGGCTCTTGGGTATTCCACGAAGATGCGCTaGCCGCGGCCACGGCTTATC +
Preference number: 4 (lower is better)
Translates to: AQGRGTQKPDPESRALGYSTKMR*PRPRLI
Trigger: GATAAGCCGTGGCCGCGGGCAGCGCATCTTCGTGGA...ATACCCAAGAGCCCTAGACTCAGGATCTGGTTTCTGTGTCCCCCTGCCTTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp ACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGACAAGCGCCACGCATaGGCCCACGTCCTGAAAGGC +
Preference number: 4 (lower is better)
Translates to: TPLSSRKGAEALPHQLYNDKRHA*AHVLKG
Trigger: GCCTTTCAGGACGTGGGCGCATGCGTGGCGCTTGTC...ATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR GCA 90 bp ATAAGGAACTCCACGGTGGGCTCAGCACAACCACTTCTGCCAGGGCTCTTCAAAGAAGGCGCTCTCGGCTaGGGTGGCTGGGAACGTGGC +
Preference number: 4 (lower is better)
Translates to: IRNSTVGSAQPLLPGLFKEGALG*GGWERG
Trigger: GCCACGTTCCCAGCCACCGCAGCCGAGAGCGCCTTC...TTTGAAGAGCCCTGGCAGAAGTGGTTGTGCTGAGCCCACCGTGGAGTTCCTTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp GCGCACATCTTGATCTTGGCTTCCAGCCTCCAGAGCTGTGGGACAGTAAATCCCTGGCGACCGGGGAGCTaGAAGCAGCCACAGCACAGC +
Preference number: 4 (lower is better)
Translates to: AHILILASSLQSCGTVNPWRPGS*KQPQHS
Trigger: GCTGTGCTGTGGCTGCTTGCAGCTCCCCGGTCGCCA...GGGATTTACTGTCCCACAGCTCTGGAGGCTGGAAGCCAAGATCAAGATGTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp CCTCCAGAGCTGTGGGACAGTAAATCCCTCTATGCAGAGAGATCTCAGACGCAGACCAGCTGCCCCTCGTaGCGCCTGAGGAAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: PPELWDSKSLYAERSQTQTSCPS*RLRKPS
Trigger: GGACGGCTTCCTCAGGCGGCACGAGGGGCAGCTGGT...CTGCGTCTGAGATCTCTCTGCATAGAGGGATTTACTGTCCCACAGCTCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp ACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATCAGCACATGGCGAGCTaGCAGGCCCCGGTGAACGTA +
Preference number: 4 (lower is better)
Translates to: TPLSSRKGAEALPHQLYNQHMAS*QAPVNV
Trigger: TACGTTCACCGGGGCCTGGCAGCTCGCCATGTGCTG...ATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp ACCCTACGAAAGCTCTGGCATACTGGGCCCCACCATTCCCGGGGGCCCTTGTGGCCATCTTGCTCAGGATaGTGTGGATCTGGGAGAACC +
Preference number: 4 (lower is better)
Translates to: TLRKLWHTGPHHSRGPLWPSCSG*CGSGRT
Trigger: GGTTCTCCCAGATCCACAGCATCCTGAGCAAGATGG...CCACAAGGGCCCCCGGGAATGGTGGGGCCCAGTATGCCAGAGCTTTCGTAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp CACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGGGGGGCTCTGGGTCCTaGACCATCTTGCTCAGGATG +
Preference number: 4 (lower is better)
Translates to: HPCPRGRGQKPFHTSYTMGGSGS*TILLRM
Trigger: CATCCTGAGCAAGATGGTGCAGGACCCAGAGCCCCC...CATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR GCA 90 bp CGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGTGCACCCCCTGGCCCTaGAGCTGGAGCACTCGTGCC +
Preference number: 4 (lower is better)
Translates to: RGRGQKPFHTSYTMIKQLCTPWP*SWSTRA
Trigger: GGCACGAGTGCTCCAGCTGCAGGGCCAGGGGGTGCA...CAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp CTCATGTACTCGGTGACAATCATCAAGGTGCTTCCTCGGGTAACAACGCCCTCCTGCACCCCCTGGCCCTaGAGCTGGAGCACTCGTGCC +
Preference number: 4 (lower is better)
Translates to: LMYSVTIIKVLPRVTTPSCTPWP*SWSTRA
Trigger: GGCACGAGTGCTCCAGCTGCAGGGCCAGGGGGTGCA...GGAGGGCGTTGTTACCCGAGGAAGCACCTTGATGATTGTCACCGAGTACATGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000437645.5
CDS-3UTR GCA 90 bp GCCCAAGGCAGGGGGACACAGAAACCAGATCCTGAGTCTAGGGCTCTTGGGTATCCCCCACCGGAGTCCTaGCTTGGAAGAATGGGGTCC +
Preference number: 4 (lower is better)
Translates to: AQGRGTQKPDPESRALGYPPPES*LGRMGS
Trigger: GGACCCCATTCTTCCAAGGCAGGACTCCGGTGGGGG...ATACCCAAGAGCCCTAGACTCAGGATCTGGTTTCTGTGTCCCCCTGCCTTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp CCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTGGCAGCTGCAGTCACTaGCAGGTAGAAGAAGACCCC +
Preference number: 4 (lower is better)
Translates to: PGHRSPANTARGPSAETAGSCSH*QVEEDP
Trigger: GGGGTCTTCTTCTACCTGGCAGTGACTGCAGCTGCC...AGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp CACTCCTCAGTGGAGGGGAGATCTACCCTGGACACCGAAGTCCTGCCAACACAGCGAGGCCTGCCATCTTaGCTGCCGAAAACTCCACCC +
Preference number: 4 (lower is better)
Translates to: HSSVEGRSTLDTEVLPTQRGLPS*LPKTPP
Trigger: GGGTGGAGTTTTCGGCAGGCAAGATGGCAGGCCTCG...CTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGATCTCCCCTCCACTGAGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp ACCCTACGAAAGCTCTGGCATACTGGGCCCCACCATTCCCGGGGGCCCTTGTGGCTTTTGTCCGAGGCCTaGCATCTTGCCTGCCGAAAA +
Preference number: 4 (lower is better)
Translates to: TLRKLWHTGPHHSRGPLWLLSEA*HLACRK
Trigger: TTTTCGGCAGGCAAGATGGCAGGCCTCGGACAAAAG...CCACAAGGGCCCCCGGGAATGGTGGGGCCCAGTATGCCAGAGCTTTCGTAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp CTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTGAGGGTAATGGGGGCTTaGAGGCCACCTCTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: LDTEVLPTQPGALLQKQLRVMGA*RPPLSS
Trigger: ACTGGACAGAGGTGGCCTGCAAGCCCCCATTACCCT...CAGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CACTCCTCAGTGGAGGGGAGATCTACCCTGGACACCGAAGTCCTGCCAACACAGAAGTCACCACGCTCCTaGAATCCCGCGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: HSSVEGRSTLDTEVLPTQKSPRS*NPALQL
Trigger: CAGCTGCAGCGCGGGATTCCAGGAGCGTGGTGACTT...CTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGATCTCCCCTCCACTGAGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp TCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTCGGGGCTCTGGTCCCTaGACCCTGAGGCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: SRKGAEALPHQLYNDQATRGSGP*TLRQPP
Trigger: GGGAGGCTGCCTCAGGGTCCAGGGACCAGAGCCCCG...AGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp CTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTGAGGGCCTCCTCCAAATaGCCAGCACACTCATCACGG +
Preference number: 4 (lower is better)
Translates to: LDTEVLPTQPGALLQKQLRASSK*PAHSSR
Trigger: CCGTGATGAGTGTGCTGGCCATTTGGAGGAGGCCCT...CAGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp GCCAGAGATCTTGCAGACAAGGTCGCTGCTGACCAGCACATGGCGAGCTGCCAGAGGGCCTCCTCCAAATaGCCAGCACACTCATCACGG +
Preference number: 4 (lower is better)
Translates to: ARDLADKVAADQHMASCQRASSK*PAHSSR
Trigger: CCGTGATGAGTGTGCTGGCCATTTGGAGGAGGCCCT...CTGGCAGCTCGCCATGTGCTGGTCAGCAGCGACCTTGTCTGCAAGATCTCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000437645.5
CDS-3UTR CCA 90 bp CCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCGGATCTGGGAGAACCTaGGCCGCTCACCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: PCPRGRGQKPFHTSYTMIGSGRT*AAHLGP
Trigger: AGGACCCAGGTGAGCGGCCCAGGTTCTCCCAGATCC...GATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR CCA 90 bp CTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTGAGGATGCTGTGGATCTaGGAGAACCTGGGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: LDTEVLPTQPGALLQKQLRMLWI*ENLGRS
Trigger: TGAGCGGCCCAGGTTCTCCCAGATCCACAGCATCCT...CAGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CCATTCCCGGGGGCCCTTGTGGATAAGGAACTCCACGGTGGGCTCAGCACAACCTTGCTCAGGATGCTGTaGATCTGGGAGAACCTGGGC +
Preference number: 4 (lower is better)
Translates to: PFPGALVDKELHGGLSTTLLRML*IWENLG
Trigger: GCCCAGGTTCTCCCAGATCCACAGCATCCTGAGCAA...GGTTGTGCTGAGCCCACCGTGGAGTTCCTTATCCACAAGGGCCCCCGGGAATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTCCCTGTGGAGGCTCACCAGGTCCTaGGCAGTCATCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: PSRADKCHGRPKQTQSLWRLTRS*AVISAT
Trigger: CGTGGCCGAGATGACTGCCCAGGACCTGGTGAGCCT...CCACAGGGACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp ATAAGGAACTCCACGGTGGGCTCAGCACAACCACTTCTGCCAGGGCTCTTCAAAGCTTGCCACGGTCCTTaGGCAGGGCTGGGGGACTGG +
Preference number: 4 (lower is better)
Translates to: IRNSTVGSAQPLLPGLFKACHGP*AGLGDW
Trigger: CCAGTCCCCCAGCCCTGCCCAAGGACCGTGGCAAGC...TTTGAAGAGCCCTGGCAGAAGTGGTTGTGCTGAGCCCACCGTGGAGTTCCTTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTCCCTGTGGAAAGCGGGGAAGCTGTaGCCCCACCAGATCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PSRADKCHGRPKQTQSLWKAGKL*PHQIWA
Trigger: GGCCCAGATCTGGTGGGGCCACAGCTTCCCCGCTTT...CCACAGGGACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTCCCTGTGGGGCCCCAGCCCCCAGTaGGTACAAATGGCAGTAGGG +
Preference number: 4 (lower is better)
Translates to: PSRADKCHGRPKQTQSLWGPSPQ*VQMAVG
Trigger: CCCTACTGCCATTTGTACCCACTGGGGGCTGGGGCC...CCACAGGGACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp ATAAGGAACTCCACGGTGGGCTCAGCACAACCACTTCTGCCAGGGCTCTTCAAAAGGTGGATGCACCTCTaGCCCAGCCCCCGACGCCTG +
Preference number: 4 (lower is better)
Translates to: IRNSTVGSAQPLLPGLFKRWMHL*PSPRRL
Trigger: CAGGCGTCGGGGGCTGGGCCAGAGGTGCATCCACCT...TTTGAAGAGCCCTGGCAGAAGTGGTTGTGCTGAGCCCACCGTGGAGTTCCTTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp GCCCAAGGCAGGGGGACACAGAAACCAGATCCTGAGTCTAGGGCTCTTGGGTATAGGCACGGAGCTGGCTaGAGGGGAGTCGCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: AQGRGTQKPDPESRALGYRHGAG*RGVASR
Trigger: TCTAGAGGCGACTCCCCTCCAGCCAGCTCCGTGCCT...ATACCCAAGAGCCCTAGACTCAGGATCTGGTTTCTGTGTCCCCCTGCCTTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CACTCCTCAGTGGAGGGGAGATCTACCCTGGACACCGAAGTCCTGCCAACACAGCCCAAGAAGGGATGCTaGTCCAGGCTTCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: HSSVEGRSTLDTEVLPTQPKKGC*SRLPRR
Trigger: CCTCCTGGGAAGCCTGGACCAGCATCCCTTCTTGGG...CTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGATCTCCCCTCCACTGAGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp ACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATATCACCTGCACCCCCTaGCCCTGCAGCTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: TPLSSRKGAEALPHQLYNITCTP*PCSWST
Trigger: AGTGCTCCAGCTGCAGGGCCAGGGGGTGCAGGTGAT...ATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000427468.6
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp AGGAGGGCCTCTCGATGTTCAGCCAAAGAGATGCCTAGGCTCACCAGGTCCTGGCAGGGACTTTCTGGGTaGAGGGTGGGCTTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: RRASRCSAKEMPRLTRSWQGLSG*RVGLVW
Trigger: CCACACCAAGCCCACCCTCCACCCAGAAAGTCCCTG...CCAGGACCTGGTGAGCCTAGGCATCTCTTTGGCTGAACATCGAGAGGCCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432874.7
CDS-3UTR CCA 90 bp GGCTCCCATAGCCAGCAGCCGCGAAGCTGTCCTTGTAGCGGCACAGGTCCAGGGCAGCCTCCAGAGCTGTaGGACAGTAAATCCCTCTAT +
Preference number: 4 (lower is better)
Translates to: GSHSQQPRSCPCSGTGPGQPPEL*DSKSLY
Trigger: ATAGAGGGATTTACTGTCCCACAGCTCTGGAGGCTG...CCCTGGACCTGTGCCGCTACAAGGACAGCTTCGCGGCTGCTGGCTATGGGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp GTCCTTGTAGCGGCACAGGTCCAGGGCCTCCAGCCACGCGCCCACAGAGCCAAACAGCCTCCAGAGCTGTaGGACAGTAAATCCCTCTAT +
Preference number: 4 (lower is better)
Translates to: VLVAAQVQGLQPRAHRAKQPPEL*DSKSLY
Trigger: ATAGAGGGATTTACTGTCCCACAGCTCTGGAGGCTG...TTTGGCTCTGTGGGCGCGTGGCTGGAGGCCCTGGACCTGTGCCGCTACAAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp GCTCCCCTCACAGCTCTCAGCAGGAAACAACCTTGCGCACATCTTGATCTTGGCGGTCCGCTAGTGGGGTaGGAGGCCTGGGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: APLTALSRKQPCAHLDLGGPLVG*EAWVLL
Trigger: CAGAAGGACCCAGGCCTCCCACCCCACTAGCGGACC...GCCAAGATCAAGATGTGCGCAAGGTTGTTTCCTGCTGAGAGCTGTGAGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp GACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAAGGCTCCTCTCCAGCGTaGCGCTTTTCGCATCCAGTT +
Preference number: 4 (lower is better)
Translates to: DTPVLEEGGRSPSTPAIQGSSPA*RFSHPV
Trigger: AACTGGATGCGAAAAGCGTCACGCTGGAGAGGAGCC...TTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp TGGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACCAGATACTTCATGGCTaGTGCCAGCCCAGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: WTPLSSRKGAEALPHQLYQILHG*CQPRQQ
Trigger: TTGCTGCCTGGGCTGGCATCAGCCATGAAGTATCTG...GTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp AGGCACCATATCACAGACAAGTTTTTATTATCACCTGCACCCCCTGGCCCTGCAGGTGTAGACAGCCTCTaGTCGGTCCCGGGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: RHHITDKFLLSPAPPGPAGVDSL*SVPGAP
Trigger: CGGGGCCCCCGGGACCGATCAGAGGCTGTCTACACC...TGCAGGGCCAGGGGGTGCAGGTGATAATAAAAACTTGTCTGTGATATGGTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp GGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACACATCCTCCACAGCCTTaGTCACGTCTTGGCCAGACA +
Preference number: 4 (lower is better)
Translates to: GHPCPRGRGQKPFHTSYTHPPQP*SRLGQT
Trigger: TGTCTGGCCAAGACGTGATCAAGGCTGTGGAGGATG...TGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp CTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTGAATGGCAGTAGGGCATaGGCCAGGGCAATCTCAACC +
Preference number: 4 (lower is better)
Translates to: LDTEVLPTQPGALLQKQLNGSRA*ARAIST
Trigger: GGTTGAGATTGCCCTGGCTCATGCCCTACTGCCATT...CAGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp CACTCCTCAGTGGAGGGGAGATCTACCCTGGACACCGAAGTCCTGCCAACACAGAGGACCCACGCTGTCTaGCTGGTCAATGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: HSSVEGRSTLDTEVLPTQRTHAV*LVNGSV
Trigger: CACAGACCCATTGACCAGTCAGACAGCGTGGGTCCT...CTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGATCTCCCCTCCACTGAGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp GTCCTGGGCAGTCATCTCGGCCACGGCCTCCAGGCTCCCATAGCCAGCAGCCGCGCCTTATCAAAGAGCTaGTATTTTGCTCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: VLGSHLGHGLQAPIASSRALSKS*YFALHR
Trigger: TCTGTGGAGAGCAAAATATCAGCTCTTTGATAAGGC...GCGGCTGCTGGCTATGGGAGCCTGGAGGCCGTGGCCGAGATGACTGCCCAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000534097.5
CDS-3UTR GCA 90 bp CCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTTGGGCTCCAGCACATTaGACACTTGGTACGTGCGGA +
Preference number: 4 (lower is better)
Translates to: PGHRSPANTARGPSAETAWAPAH*TLGTCG
Trigger: TCCGCACGTACCAAGTGTGCAATGTGCTGGAGCCCA...AGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp CAGAGAATGACTGATGTAGCTGGAGATGAGGACGAGGCTCCATCCACCCAAGAAGCAGTTCCACGAAGATaGGCTGCCCGCGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: QRMTDVAGDEDEAPSTQEAVPRR*AARGHG
Trigger: GCCGTGGCCGCGGGCAGCGCATCTTCGTGGAACTGC...TTCTTGGGTGGATGGAGCCTCGTCCTCATCTCCAGCTACATCAGTCATTCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp TCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGAAGGCGCTCTCGGCTaGGGTGGCTGGGAACGTGGC +
Preference number: 4 (lower is better)
Translates to: SRKGAEALPHQLYNDQATEGALG*GGWERG
Trigger: GCCACGTTCCCAGCCACCGCAGCCGAGAGCGCCTTC...AGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR GCA 90 bp CAGAGAATGACTGATGTAGCTGGAGATGAGGACGAGGCTCCATCCACCCAAGAATCCAGGGCCCGGCTGTaGTCTGGGCACGGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: QRMTDVAGDEDEAPSTQESRARL*SGHGEQ
Trigger: CTGCTCACCGTGCCCAGAGCACAGCCGGGCCCTGGA...TTCTTGGGTGGATGGAGCCTCGTCCTCATCTCCAGCTACATCAGTCATTCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp CCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTCCCTGTGGGTTCCACTCGGTCCCTaGGGATCTCATCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: PSRADKCHGRPKQTQSLWVPLGP*GSHPPP
Trigger: GGGAGGAGGATGAGATCCGCAGGGACCGAGTGGAAC...CCACAGGGACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp TGTTCAGCCAAAGAGATGCCTAGGCTCACCAGGTCCTGGGCAGTCATCTCGGCCCTGTCCCTCAGCATATaGACGGCTACGAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: CSAKEMPRLTRSWAVISALSLSI*TATSSS
Trigger: GGAGCTGCTCGTAGCCGTGCATATGCTGAGGGACAG...GGCCGAGATGACTGCCCAGGACCTGGTGAGCCTAGGCATCTCTTTGGCTGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp ATCTACCCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAGAGCCACCAGGCAGCTaGAGTCACTGCCAGGTAGAA +
Preference number: 4 (lower is better)
Translates to: IYPGHRSPANTARGPSAEEPPGS*SHCQVE
Trigger: TTCTACCTGGCAGTGACTGCAGCTGCCTGGTGGCTC...TTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp CTGCCATCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTTGGACACCGAAGTCCTaGCAACACAGCCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LPSCLPKTPPTPRKEPSLWTPKS*QHSQGP
Trigger: GGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCA...AAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGATGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp TCTGGGCTCTTTCTCATGCTAGCCTCTCTGCATGGACTCCTTTTGTCCGAGGCCGACAGGGACACGCTCTaGGGTTCCACTCGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SGLFLMLASLHGLLLSEADRDTL*GSTRSL
Trigger: CAGGGACCGAGTGGAACCCCAGAGCGTGTCCCTGTC...GGCCTCGGACAAAAGGAGTCCATGCAGAGAGGCTAGCATGAGAAAGAGCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp GGAGTAAGTCTGCTCACTCTGACCGGGGAAAAGAGCAGATTGGGATGTGACTCCCGTACTCCGTGTCATTaGCCCCAGGGGCTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: GVSLLTLTGEKSRLGCDSRTPCH*PQGLRQ
Trigger: CTGCCGGAGCCCCTGGGGCCAATGACACGGAGTACG...GGAGTCACATCCCAATCTGCTCTTTTCCCCGGTCAGAGTGAGCAGACTTACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000525749.1
CDS-3UTR CCA 90 bp TCTGGGCTCTTTCTCATGCTAGCCTCTCTGCATGGACTCCTTTTGTCCGAGGCCACAATGGCGGGGCTCTaGTCCCTGGACCCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: SGLFLMLASLHGLLLSEATMAGL*SLDPEA
Trigger: TGCCTCAGGGTCCAGGGACCAGAGCCCCGCCATTGT...GGCCTCGGACAAAAGGAGTCCATGCAGAGAGGCTAGCATGAGAAAGAGCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp AGGAGGGCCTCTCGATGTTCAGCCAAAGAGATGCCTAGGCTCACCAGGTCCTGGAGGGCCTCCTCCAAATaGCCAGCACACTCATCACGG +
Preference number: 4 (lower is better)
Translates to: RRASRCSAKEMPRLTRSWRASSK*PAHSSR
Trigger: CCGTGATGAGTGTGCTGGCCATTTGGAGGAGGCCCT...CCAGGACCTGGTGAGCCTAGGCATCTCTTTGGCTGAACATCGAGAGGCCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp CCATTCCCGGGGGCCCTTGTGGATAAGGAACTCCACGGTGGGCTCAGCACAACCAGCTCCTCTTCATCATaGGCATCCCCTCCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: PFPGALVDKELHGGLSTTSSSSS*ASPPPL
Trigger: CAAAGGAGGAGGGGATGCCCATGATGAAGAGGAGCT...GGTTGTGCTGAGCCCACCGTGGAGTTCCTTATCCACAAGGGCCCCCGGGAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CCATTCCCGGGGGCCCTTGTGGATAAGGAACTCCACGGTGGGCTCAGCACAACCTCGCATCCAGTTCCTTaGCGAACAGATGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: PFPGALVDKELHGGLSTTSHPVP*RTDAQP
Trigger: AGGCTGTGCATCTGTTCGCCAAGGAACTGGATGCGA...GGTTGTGCTGAGCCCACCGTGGAGTTCCTTATCCACAAGGGCCCCCGGGAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp GACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATCCAGCCGCACGATGTaGCTATGGTCAAACTGGCCC +
Preference number: 4 (lower is better)
Translates to: DTPVLEEGGRSPSTPAIQSSRTM*LWSNWP
Trigger: GGGCCAGTTTGACCATAGCCACATCGTGCGGCTGGA...TTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp GGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACATTGCTCAGGATGCTGTaGATCTGGGAGAACCTGGGC +
Preference number: 4 (lower is better)
Translates to: GHPCPRGRGQKPFHTSYTLLRML*IWENLG
Trigger: GCCCAGGTTCTCCCAGATCCACAGCATCCTGAGCAA...TGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR CCA 90 bp CCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTCCCTGTGGTGGCCCCACCAGATCTaGGCCCAAGCAGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: PSRADKCHGRPKQTQSLWWPHQI*AQAEEE
Trigger: CTCTTCCTCTGCTTGGGCCCAGATCTGGTGGGGCCA...CCACAGGGACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTGCCTTACCCCTGGATTaGGTTCTGACCTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: PGHRSPANTARGPSAETAALPLD*VLTSAL
Trigger: CAGAGCTGAGGTCAGAACCCAATCCAGGGGTAAGGC...AGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp GCCCAAGGCAGGGGGACACAGAAACCAGATCCTGAGTCTAGGGCTCTTGGGTATTCCCGGGGGCCCTTGTaGATAAGGAACTCCACGGTG +
Preference number: 4 (lower is better)
Translates to: AQGRGTQKPDPESRALGYSRGPL*IRNSTV
Trigger: CACCGTGGAGTTCCTTATCCACAAGGGCCCCCGGGA...ATACCCAAGAGCCCTAGACTCAGGATCTGGTTTCTGTGTCCCCCTGCCTTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTCCCTGTGGCCAGAGTCACTGAGCTaGGGCAGGTGCTCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: PSRADKCHGRPKQTQSLWPESLS*GRCSGD
Trigger: GTCTCCTGAGCACCTGCCCCAGCTCAGTGACTCTGG...CCACAGGGACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp TGTTCAGCCAAAGAGATGCCTAGGCTCACCAGGTCCTGGGCAGTCATCTCGGCCCTCAGACGCAGATTCTaGACACCCCTGTCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: CSAKEMPRLTRSWAVISALRRRF*TPLSSR
Trigger: CCTCGAGGACAGGGGTGTCCAGAATCTGCGTCTGAG...GGCCGAGATGACTGCCCAGGACCTGGTGAGCCTAGGCATCTCTTTGGCTGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp CACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGCTCAGACGCAGATTCTaGACACCCCTGTCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: HPCPRGRGQKPFHTSYTMLRRRF*TPLSSR
Trigger: CCTCGAGGACAGGGGTGTCCAGAATCTGCGTCTGAG...CATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp GCCAGAGATCTTGCAGACAAGGTCGCTGCTGACCAGCACATGGCGAGCTGCCAGGTATCCGGAACAGTCTaGGTCCTTCTGCCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: ARDLADKVAADQHMASCQVSGTV*VLLPAV
Trigger: GACTGCTGGCAGAAGGACCCAGACTGTTCCGGATAC...CTGGCAGCTCGCCATGTGCTGGTCAGCAGCGACCTTGTCTGCAAGATCTCTGGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432874.7
CDS-3UTR CCA 90 bp GCCTGCAGGGCGCTGATCCCGCTGAGGAGGGCCTCTCGATGTTCAGCCAAAGAGCAGCCTCCAGAGCTGTaGGACAGTAAATCCCTCTAT +
Preference number: 4 (lower is better)
Translates to: ACRALIPLRRASRCSAKEQPPEL*DSKSLY
Trigger: ATAGAGGGATTTACTGTCCCACAGCTCTGGAGGCTG...CTCTTTGGCTGAACATCGAGAGGCCCTCCTCAGCGGGATCAGCGCCCTGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp CTCTCAGCAGGAAACAACCTTGCGCACATCTTGATCTTGGCTTCCAGCCTCCAGGTGGGGTGGGAGGCCTaGGTCCTTCTGCCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: LSAGNNLAHILILASSLQVGWEA*VLLPAV
Trigger: GACTGCTGGCAGAAGGACCCAGGCCTCCCACCCCAC...CTGGAGGCTGGAAGCCAAGATCAAGATGTGCGCAAGGTTGTTTCCTGCTGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp CTGGGCCTCCCAGGATGGCCCCGGGGAAGCGGCCCGGATCTGAAAGACGTAGCGGGGAAAAGAGCAGATTaGGATGTGACTCCATTTGTT +
Preference number: 4 (lower is better)
Translates to: LGLPGWPRGSGPDLKDVAGKRAD*DVTPFV
Trigger: AACAAATGGAGTCACATCCCAATCTGCTCTTTTCCC...CGCTACGTCTTTCAGATCCGGGCCGCTTCCCCGGGGCCATCCTGGGAGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000525749.1
CDS-3UTR TCA 90 bp CCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCGTTCATCCACGCCGCTaGTCTCCTCCCACCCATTAC +
Preference number: 4 (lower is better)
Translates to: PCPRGRGQKPFHTSYTMIVHPRR*SPPTHY
Trigger: GTAATGGGTGGGAGGAGATCAGCGGCGTGGATGAAC...GATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR TCA 90 bp GGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCAAACAAACTGGCCCAGCGTaGGGGCCTCGGCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GQKPFHTSYTMIKQLPLKQTGPA*GPRPGS
Trigger: GCTTCCTGGCCGAGGCCCTCACGCTGGGCCAGTTTG...TTTGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp CACTCCTCAGTGGAGGGGAGATCTACCCTGGACACCGAAGTCCTGCCAACACAGCGTCACTGGCAGAGCTaGAGTGGCCAAACTGAAGTG +
Preference number: 4 (lower is better)
Translates to: HSSVEGRSTLDTEVLPTQRHWQS*SGQTEV
Trigger: CACTTCAGTTTGGCCACTTCAGCTCTGCCAGTGACG...CTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGATCTCCCCTCCACTGAGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp CACTCCTCAGTGGAGGGGAGATCTACCCTGGACACCGAAGTCCTGCCAACACAGTTGGGTATCAGCCCCTaGGCTCAGCACCATCTTTGC +
Preference number: 4 (lower is better)
Translates to: HSSVEGRSTLDTEVLPTQLGISP*AQHHLC
Trigger: GCAAAGATGGTGCTGAGCTCAGGGGCTGATACCCAA...CTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGATCTCCCCTCCACTGAGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp CTCATGTACTCGGTGACAATCATCAAGGTGCTTCCTCGGGTAACAACGCCCTCCTCCCCAAACCGCCCTTaGGGACCAGGAGAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: LMYSVTIIKVLPRVTTPSSPNRP*GPGEGH
Trigger: GTGACCCTCTCCTGGTCCTCAAGGGCGGTTTGGGGA...GGAGGGCGTTGTTACCCGAGGAAGCACCTTGATGATTGTCACCGAGTACATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432874.7
CDS-3UTR GCA 90 bp CACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGTGGGCTCCAGCACATTaGACACTTGGTACGTGCGGA +
Preference number: 4 (lower is better)
Translates to: HPCPRGRGQKPFHTSYTMWAPAH*TLGTCG
Trigger: TCCGCACGTACCAAGTGTGCAATGTGCTGGAGCCCA...CATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR GCA 90 bp GGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACACTTATCCAGCCAGTCTaGAGCCAGTTGTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: GHPCPRGRGQKPFHTSYTLIQPV*SQLSWL
Trigger: CAACCAGGACAACTGGCTGCAGACTGGCTGGATAAG...TGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR GCA 90 bp ACACACAGCCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTCGATCGTGTCGATTTTaGGGGGCCGGCTGCCGCCTA +
Preference number: 4 (lower is better)
Translates to: THSQAEQTSVTGGLNKLSRSCRF*GAGCRL
Trigger: TAGGCGGCAGCCGGCCCCGCAAAATCGACACGATCG...ACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGGCTGTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp GCTCCCCTCACAGCTCTCAGCAGGAAACAACCTTGCGCACATCTTGATCTTGGCGTTCCACTCGGTCCCTaGGGATCTCATCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: APLTALSRKQPCAHLDLGVPLGP*GSHPPP
Trigger: GGGAGGAGGATGAGATCCGCAGGGACCGAGTGGAAC...GCCAAGATCAAGATGTGCGCAAGGTTGTTTCCTGCTGAGAGCTGTGAGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437645.5
CDS-3UTR GCA 90 bp CACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGCTCCTTTGCCATAGCTaGAGGGCCTCCTCCAAATGG +
Preference number: 4 (lower is better)
Translates to: HPCPRGRGQKPFHTSYTMLLCHS*RASSKW
Trigger: CCATTTGGAGGAGGCCCTGCAGCTATGGCAAAGGAG...CATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp ATAAGGAACTCCACGGTGGGCTCAGCACAACCACTTCTGCCAGGGCTCTTCAAACAGCACATGGCGAGCTaGCAGGCCCCGGTGAACGTA +
Preference number: 4 (lower is better)
Translates to: IRNSTVGSAQPLLPGLFKQHMAS*QAPVNV
Trigger: TACGTTCACCGGGGCCTGGCAGCTCGCCATGTGCTG...TTTGAAGAGCCCTGGCAGAAGTGGTTGTGCTGAGCCCACCGTGGAGTTCCTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp CGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCAGCACATGGCGAGCTaGCAGGCCCCGGTGAACGTA +
Preference number: 4 (lower is better)
Translates to: RGRGQKPFHTSYTMIKQLQHMAS*QAPVNV
Trigger: TACGTTCACCGGGGCCTGGCAGCTCGCCATGTGCTG...CAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp TGGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACCCATCTTGCTCAGGATaGTGTGGATCTGGGAGAACC +
Preference number: 4 (lower is better)
Translates to: WTPLSSRKGAEALPHQLYPSCSG*CGSGRT
Trigger: GGTTCTCCCAGATCCACAGCATCCTGAGCAAGATGG...GTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR GCA 90 bp TTCCAGCCTCCAGAGCTGTGGGACAGTAAATCCCTCTATGCAGAGAGATCTCAGTGGAGCACTCGTGCCTaGAGGGCGCTGATCCCGCTG +
Preference number: 4 (lower is better)
Translates to: FQPPELWDSKSLYAERSQWSTRA*RALIPL
Trigger: CAGCGGGATCAGCGCCCTGCAGGCACGAGTGCTCCA...CTGAGATCTCTCTGCATAGAGGGATTTACTGTCCCACAGCTCTGGAGGCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp CCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTCCCCGAATTTCCTCCTaGTGTTATCTCAGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: PGHRSPANTARGPSAETAPRISS*CYLRGP
Trigger: AGGACCCCTGAGATAACAGCAGGAGGAAATTCGGGG...AGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp GCCCAAGGCAGGGGGACACAGAAACCAGATCCTGAGTCTAGGGCTCTTGGGTATCTGCTGAGATCCAGCTaGCTTCCTGCCACCCTACGA +
Preference number: 4 (lower is better)
Translates to: AQGRGTQKPDPESRALGYLLRSS*LPATLR
Trigger: TCGTAGGGTGGCAGGAAGGCAGCTGGATCTCAGCAG...ATACCCAAGAGCCCTAGACTCAGGATCTGGTTTCTGTGTCCCCCTGCCTTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp CTGCCATCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTGCCTGCCATCTTGCCTaGCGAAAACTCCACCCACCC +
Preference number: 4 (lower is better)
Translates to: LPSCLPKTPPTPRKEPSLACHLA*RKLHPP
Trigger: GGGTGGGTGGAGTTTTCGGCAGGCAAGATGGCAGGC...AAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGATGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp CTGCCATCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTTCCCCCACCTCTGGGTaGTCTGCAAAGAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: LPSCLPKTPPTPRKEPSLSPTSG*SAKRHC
Trigger: GCAGTGCCTCTTTGCAGAGCACCCAGAGGTGGGGGA...AAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGATGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp TCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTTCCCACCCACCCAAGAAGGGATaGTGGTCCAGGCTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SCLPKTPPTPRKEPSLSHPPKKG*WSRLPR
Trigger: CCTGGGAAGCCTGGACCAGCATCCCTTCTTGGGTGG...GTGGGAAAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CAGAGAATGACTGATGTAGCTGGAGATGAGGACGAGGCTCCATCCACCCAAGAACGGCGCAGGTCTCCATaGTCCGCAGACCGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: QRMTDVAGDEDEAPSTQERRRSP*SADRAV
Trigger: GACAGCTCGGTCTGCGGACCATGGAGACCTGCGCCG...TTCTTGGGTGGATGGAGCCTCGTCCTCATCTCCAGCTACATCAGTCATTCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp AGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCCAGCCCAGCTCGGCCTaGGAGGCTTTGGAATCCAGG +
Preference number: 4 (lower is better)
Translates to: RGQKPFHTSYTMIKQLPLQPSSA*EALESR
Trigger: CCTGGATTCCAAAGCCTCCCAGGCCGAGCTGGGCTG...GAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR CCA 90 bp ACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATCTCCCACCCATTACTTaGCAGTGCAGTCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: TPLSSRKGAEALPHQLYNLPPIT*QCSPAQ
Trigger: CTGGGCTGGACTGCACTGCCAAGTAATGGGTGGGAG...ATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR CCA 90 bp ATCTACCCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAACTTGGTACGTGCGGATaGGACGGTCGTGTTCATCCA +
Preference number: 4 (lower is better)
Translates to: IYPGHRSPANTARGPSAELGTCG*DGRVHP
Trigger: TGGATGAACACGACCGTCCCATCCGCACGTACCAAG...TTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAAGGCACACGCAGAAGGTaGAGGCGTTTTCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: PRGRGQKPFHTSYTMIKQGTRRR*RRFPGP
Trigger: GGGCCCTGGAAAACGCCTCCACCTTCTGCGTGTGCC...TTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR CCA 90 bp GGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCAAACCGAGGGCGGGTCGGTaGGTGAGCGCGCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: GQKPFHTSYTMIKQLPLKPRAGR*VSAHSC
Trigger: ACAGCTATGCGCGCTCACCCACCGACCCGCCCTCGG...TTTGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR CCA 90 bp CGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGGACAGGGACACGCTCTaGGGTTCCACTCGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: RGRGQKPFHTSYTMIKQLDRDTL*GSTRSL
Trigger: CAGGGACCGAGTGGAACCCCAGAGCGTGTCCCTGTC...CAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427468.6
ENST00000437645.5
CDS-3UTR CCA 90 bp CGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGACAATGGCGGGGCTCTaGTCCCTGGACCCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: RGRGQKPFHTSYTMIKQLTMAGL*SLDPEA
Trigger: TGCCTCAGGGTCCAGGGACCAGAGCCCCGCCATTGT...CAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp GATGATGCGAAGAGAGAGTGGGAAGATGGCCACAGGCAAGCCGGGGAGAGAGGCAGCTCCTCTTCATCATaGGCATCCCCTCCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: DDAKREWEDGHRQAGERGSSSSS*ASPPPL
Trigger: CAAAGGAGGAGGGGATGCCCATGATGAAGAGGAGCT...GCCTCTCTCCCCGGCTTGCCTGTGGCCATCTTCCCACTCTCTCTTCGCATCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp CCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTCCCTGTGGCGCACGATGTGGCTATaGTCAAACTGGCCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: PSRADKCHGRPKQTQSLWRTMWL*SNWPSV
Trigger: CACGCTGGGCCAGTTTGACCATAGCCACATCGTGCG...CCACAGGGACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp GATGATGCGAAGAGAGAGTGGGAAGATGGCCACAGGCAAGCCGGGGAGAGAGGCCTGACAGATACTTCATaGCTGATGCCAGCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: DDAKREWEDGHRQAGERGLTDTS*LMPAQA
Trigger: TGCCTGGGCTGGCATCAGCCATGAAGTATCTGTCAG...GCCTCTCTCCCCGGCTTGCCTGTGGCCATCTTCCCACTCTCTCTTCGCATCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp ATAAGGAACTCCACGGTGGGCTCAGCACAACCACTTCTGCCAGGGCTCTTCAAAGGATCTGGGAGAACCTaGGCCGCTCACCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: IRNSTVGSAQPLLPGLFKGSGRT*AAHLGP
Trigger: AGGACCCAGGTGAGCGGCCCAGGTTCTCCCAGATCC...TTTGAAGAGCCCTGGCAGAAGTGGTTGTGCTGAGCCCACCGTGGAGTTCCTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp GGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCAAGGCTCACCAGGTCCTaGGCAGTCATCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: GRGQKPFHTSYTMIKQLPRLTRS*AVISAT
Trigger: CGTGGCCGAGATGACTGCCCAGGACCTGGTGAGCCT...TGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp AATCCCTCTATGCAGAGAGATCTCAGACGCAGATTCTGGACACCCCTGTCCTCGAGGCTCACCAGGTCCTaGGCAGTCATCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: NPSMQRDLRRRFWTPLSSRLTRS*AVISAT
Trigger: CGTGGCCGAGATGACTGCCCAGGACCTGGTGAGCCT...CGAGGACAGGGGTGTCCAGAATCTGCGTCTGAGATCTCTCTGCATAGAGGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp ATCTACCCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACCGGAGTCCTGCCTTaGAAGAATGGGGTCCACTCA +
Preference number: 4 (lower is better)
Translates to: IYPGHRSPANTARGPSAETGVLP*KNGVHS
Trigger: TGAGTGGACCCCATTCTTCCAAGGCAGGACTCCGGT...TTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CCATTCCCGGGGGCCCTTGTGGATAAGGAACTCCACGGTGGGCTCAGCACAACCTCTTCACCCTCCCCATaGCTGGAGAGAAAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: PFPGALVDKELHGGLSTTSSPSP*LERKAL
Trigger: AAGAGCTTTTCTCTCCAGCCATGGGGAGGGTGAAGA...GGTTGTGCTGAGCCCACCGTGGAGTTCCTTATCCACAAGGGCCCCCGGGAATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTCCCTGTGGGGCTGTACAGGGAAGTaGTGGTGCCATAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PSRADKCHGRPKQTQSLWGCTGK*WCHRAG
Trigger: TCCTGCCCTATGGCACCACCACTTCCCTGTACAGCC...CCACAGGGACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CACTCCTCAGTGGAGGGGAGATCTACCCTGGACACCGAAGTCCTGCCAACACAGAGGGGAGATCTACCCTaGACACCGAAGTCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: HSSVEGRSTLDTEVLPTQRGDLP*TPKSCQ
Trigger: TTGGCAGGACTTCGGTGTCCAGGGTAGATCTCCCCT...CTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGATCTCCCCTCCACTGAGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CTGCCATCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTTGCAGGGCTGAGGCCTaGGACCCAACAGGATTCTGG +
Preference number: 4 (lower is better)
Translates to: LPSCLPKTPPTPRKEPSLCRAEA*DPTGFW
Trigger: CCAGAATCCTGTTGGGTCCCAGGCCTCAGCCCTGCA...AAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGATGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCCTCAGACGCAGATTCTaGACACCCCTGTCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: PCPRGRGQKPFHTSYTMILRRRF*TPLSSR
Trigger: CCTCGAGGACAGGGGTGTCCAGAATCTGCGTCTGAG...GATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp GCTCCCCTCACAGCTCTCAGCAGGAAACAACCTTGCGCACATCTTGATCTTGGCAGGGTGGGCTTGGTGTaGAGGCAGGGCTTCCAGACA +
Preference number: 4 (lower is better)
Translates to: APLTALSRKQPCAHLDLGRVGLV*RQGFQT
Trigger: TGTCTGGAAGCCCTGCCTCCACACCAAGCCCACCCT...GCCAAGATCAAGATGTGCGCAAGGTTGTTTCCTGCTGAGAGCTGTGAGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432874.7
CDS-3UTR CCA 90 bp GCTCCCCTCACAGCTCTCAGCAGGAAACAACCTTGCGCACATCTTGATCTTGGCGAGAGAGTGGGAAGATaGCCACAGGCAAGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: APLTALSRKQPCAHLDLGERVGR*PQASRG
Trigger: TCCCCGGCTTGCCTGTGGCCATCTTCCCACTCTCTC...GCCAAGATCAAGATGTGCGCAAGGTTGTTTCCTGCTGAGAGCTGTGAGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp CACCAGGTCCTGGGCAGTCATCTCGGCCACGGCCTCCAGGCTCCCATAGCCAGCGATGCATCTTTCAGTTaGATGGCACAACATAGTTGG +
Preference number: 4 (lower is better)
Translates to: HQVLGSHLGHGLQAPIASDASFS*MAQHSW
Trigger: CCAACTATGTTGTGCCATCCAACTGAAAGATGCATC...GCTGGCTATGGGAGCCTGGAGGCCGTGGCCGAGATGACTGCCCAGGACCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp CAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCAAAGAGACAGCAGCGAGTAGGTaGCGTCCGAGCGGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: QKPFHTSYTMIKQLPLKETAASR*RPSGLP
Trigger: CGGGAGGCCGCTCGGACGTCACCTACTCGCTGCTGT...CTCTTTGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR TCA 90 bp GCGCACATCTTGATCTTGGCTTCCAGCCTCCAGAGCTGTGGGACAGTAAATCCCGGCTCCTCTCCAGCGTaGCGCTTTTCGCATCCAGTT +
Preference number: 4 (lower is better)
Translates to: AHILILASSLQSCGTVNPGSSPA*RFSHPV
Trigger: AACTGGATGCGAAAAGCGTCACGCTGGAGAGGAGCC...GGGATTTACTGTCCCACAGCTCTGGAGGCTGGAAGCCAAGATCAAGATGTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp ATAAGGAACTCCACGGTGGGCTCAGCACAACCACTTCTGCCAGGGCTCTTCAAAAGACAAGGTCGCTGCTaGCCAGCACATGGCGAGCTG +
Preference number: 4 (lower is better)
Translates to: IRNSTVGSAQPLLPGLFKRQGRC*PAHGEL
Trigger: CAGCTCGCCATGTGCTGGTCAGCAGCGACCTTGTCT...TTTGAAGAGCCCTGGCAGAAGTGGTTGTGCTGAGCCCACCGTGGAGTTCCTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp ATCCCTCTATGCAGAGAGATCTCAGACGCAGATTCTGGACACCCCTGTCCTCGAAGACAAGGTCGCTGCTaGCCAGCACATGGCGAGCTG +
Preference number: 4 (lower is better)
Translates to: IPLCREISDADSGHPCPRRQGRC*PAHGEL
Trigger: CAGCTCGCCATGTGCTGGTCAGCAGCGACCTTGTCT...TCGAGGACAGGGGTGTCCAGAATCTGCGTCTGAGATCTCTCTGCATAGAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp GGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTGAAGTGGCCAAACTaGAGTGTCTCGGGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: GRGQKPFHTSYTMIKQLPLKWPN*SVSGAA
Trigger: GGCCGCTCCCGAGACACTTCAGTTTGGCCACTTCAG...TGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp CTCTCAGCAGGAAACAACCTTGCGCACATCTTGATCTTGGCTTCCAGCCTCCAGCTGAAGTGGCCAAACTaGAGTGTCTCGGGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: LSAGNNLAHILILASSLQLKWPN*SVSGAA
Trigger: GGCCGCTCCCGAGACACTTCAGTTTGGCCACTTCAG...CTGGAGGCTGGAAGCCAAGATCAAGATGTGCGCAAGGTTGTTTCCTGCTGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp AGATGCCTAGGCTCACCAGGTCCTGGGCAGTCATCTCGGCCACGGCCTCCAGGCCAACATAGTTGGCTGTaGTGTTTCTTTCTTGGTAGG +
Preference number: 4 (lower is better)
Translates to: RCLGSPGPGQSSRPRPPGQHSWL*CFFLGR
Trigger: CCTACCAAGAAAGAAACATCACAGCCAACTATGTTG...GCCTGGAGGCCGTGGCCGAGATGACTGCCCAGGACCTGGTGAGCCTAGGCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp CCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTCCCTGTGGTGCACACTTGGTACGTaGGGATGGGACGGTCGTGTT +
Preference number: 4 (lower is better)
Translates to: PSRADKCHGRPKQTQSLWCTLGT*GWDGRV
Trigger: AACACGACCGTCCCATCCGCACGTACCAAGTGTGCA...CCACAGGGACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp CACTCCTCAGTGGAGGGGAGATCTACCCTGGACACCGAAGTCCTGCCAACACAGCTTATCCAGCCAGTCTaGAGCCAGTTGTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: HSSVEGRSTLDTEVLPTQLIQPV*SQLSWL
Trigger: CAACCAGGACAACTGGCTGCAGACTGGCTGGATAAG...CTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGATCTCCCCTCCACTGAGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp TCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTTCCACGAAGATGCGCTaGCCGCGGCCACGGCTTATC +
Preference number: 4 (lower is better)
Translates to: SRKGAEALPHQLYNDQATSTKMR*PRPRLI
Trigger: GATAAGCCGTGGCCGCGGGCAGCGCATCTTCGTGGA...AGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR GCA 90 bp AAGAGAGAGAATGAGAGGTCTGTTCCTAATGCCCCCACTAGCCTGAGAACCCAGGACAAGCGCCACGCATaGGCCCACGTCCTGAAAGGC +
Preference number: 4 (lower is better)
Translates to: KRENERSVPNAPTSLRTQDKRHA*AHVLKG
Trigger: GCCTTTCAGGACGTGGGCGCATGCGTGGCGCTTGTC...CTGGGTTCTCAGGCTAGTGGGGGCATTAGGAACAGACCTCTCATTCTCTCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR GCA 90 bp CAGAGAATGACTGATGTAGCTGGAGATGAGGACGAGGCTCCATCCACCCAAGAAGACAAGCGCCACGCATaGGCCCACGTCCTGAAAGGC +
Preference number: 4 (lower is better)
Translates to: QRMTDVAGDEDEAPSTQEDKRHA*AHVLKG
Trigger: GCCTTTCAGGACGTGGGCGCATGCGTGGCGCTTGTC...TTCTTGGGTGGATGGAGCCTCGTCCTCATCTCCAGCTACATCAGTCATTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp GGAGTAAGTCTGCTCACTCTGACCGGGGAAAAGAGCAGATTGGGATGTGACTCCGTTCCACTCGGTCCCTaGGGATCTCATCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GVSLLTLTGEKSRLGCDSVPLGP*GSHPPP
Trigger: GGGAGGAGGATGAGATCCGCAGGGACCGAGTGGAAC...GGAGTCACATCCCAATCTGCTCTTTTCCCCGGTCAGAGTGAGCAGACTTACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525749.1
CDS-3UTR GCA 90 bp TCAGCAGGAAACAACCTTGCGCACATCTTGATCTTGGCTTCCAGCCTCCAGAGCCATCCCCTCCTCCTTTaGCATAGCTGCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SAGNNLAHILILASSLQSHPLLL*HSCRAS
Trigger: GGAGGCCCTGCAGCTATGGCAAAGGAGGAGGGGATG...GCTCTGGAGGCTGGAAGCCAAGATCAAGATGTGCGCAAGGTTGTTTCCTGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp GGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCAAATGGCGACCGGGGAGCTaGAAGCAGCCACAGCACAGC +
Preference number: 4 (lower is better)
Translates to: GQKPFHTSYTMIKQLPLKWRPGS*KQPQHS
Trigger: GCTGTGCTGTGGCTGCTTGCAGCTCCCCGGTCGCCA...TTTGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp ACACACAGCCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTGGGGGCTCTGGGTCCTaGACCATCTTGCTCAGGATG +
Preference number: 4 (lower is better)
Translates to: THSQAEQTSVTGGLNKLSGGSGS*TILLRM
Trigger: CATCCTGAGCAAGATGGTGCAGGACCCAGAGCCCCC...ACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGGCTGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp CACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGGTTCAGCCAAAGAGATaGCTAGGCTCACCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: HPCPRGRGQKPFHTSYTMVQPKR*LGSPGP
Trigger: AGGACCTGGTGAGCCTAGGCATCTCTTTGGCTGAAC...CATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp GGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCAAATGGAGCACTCGTGCCTaGAGGGCGCTGATCCCGCTG +
Preference number: 4 (lower is better)
Translates to: GQKPFHTSYTMIKQLPLKWSTRA*RALIPL
Trigger: CAGCGGGATCAGCGCCCTGCAGGCACGAGTGCTCCA...TTTGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp CTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTGCAGCACAACCACTTCTaGCAGGGCTCTTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: LDTEVLPTQPGALLQKQLQHNHF*QGSSKS
Trigger: TGACTTTGAAGAGCCCTGGCAGAAGTGGTTGTGCTG...CAGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp CACTCCTCAGTGGAGGGGAGATCTACCCTGGACACCGAAGTCCTGCCAACACAGGGGCACTGTGGATGGTaGCCTGGAATTACTTCTTGG +
Preference number: 4 (lower is better)
Translates to: HSSVEGRSTLDTEVLPTQGHCGW*PGITSW
Trigger: CCAAGAAGTAATTCCAGGGCACCATCCACAGTGCCC...CTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGATCTCCCCTCCACTGAGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp CCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTCTTCCCTTTCCCACCTaGAAGGCCCTGTTCAACTTA +
Preference number: 4 (lower is better)
Translates to: PGHRSPANTARGPSAETALPFPT*KALFNL
Trigger: TAAGTTGAACAGGGCCTTGCAGGTGGGAAAGGGAAG...AGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp GCCCAAGGCAGGGGGACACAGAAACCAGATCCTGAGTCTAGGGCTCTTGGGTATCACCTCTGGGTGCTCTaGAAAGAGGCACTGCACCTT +
Preference number: 4 (lower is better)
Translates to: AQGRGTQKPDPESRALGYHLWVL*KEALHL
Trigger: AAGGTGCAGTGCCTCTTTGCAGAGCACCCAGAGGTG...ATACCCAAGAGCCCTAGACTCAGGATCTGGTTTCTGTGTCCCCCTGCCTTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp ACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATAGGCCTGGGTCCTTCTaGCAGCAGTCGAGCATTAGT +
Preference number: 4 (lower is better)
Translates to: TPLSSRKGAEALPHQLYNRPGSF*QQSSIS
Trigger: ACTAATGCTCGACTGCTGGCAGAAGGACCCAGGCCT...ATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp TCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTTCCCACCTCCCACCCATTACTTaGCAGTGCAGTCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SCLPKTPPTPRKEPSLSHLPPIT*QCSPAQ
Trigger: CTGGGCTGGACTGCACTGCCAAGTAATGGGTGGGAG...GTGGGAAAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTCCCTGTGGTGCAGCCAGTTGTCCTaGTTGGGCTCCAGCACATTG +
Preference number: 4 (lower is better)
Translates to: PSRADKCHGRPKQTQSLWCSQLS*LGSSTL
Trigger: CAATGTGCTGGAGCCCAACCAGGACAACTGGCTGCA...CCACAGGGACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp GGGAGCACAGTGATTGTAGTTCAGAGAGTGGGATGTGATCTTCGTAATCATCTACGGTGGCTGGGAACGTaGCCAGGCCCCGCACGGTGG +
Preference number: 4 (lower is better)
Translates to: GSTVIVVQRVGCDLRNHLRWLGT*PGPARW
Trigger: CCACCGTGCGGGGCCTGGCCACGTTCCCAGCCACCG...TAGATGATTACGAAGATCACATCCCACTCTCTGAACTACAATCACTGTGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR CCA 90 bp GGGAGCACAGTGATTGTAGTTCAGAGAGTGGGATGTGATCTTCGTAATCATCTAGCCGCAGTGCATGCGTaGGGGGCTGCCAGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GSTVIVVQRVGCDLRNHLAAVHA*GAARLP
Trigger: GGGGAGCCTGGCAGCCCCCCACGCATGCACTGCGGC...TAGATGATTACGAAGATCACATCCCACTCTCTGAACTACAATCACTGTGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR CCA 90 bp GGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACACCCCTGTCTTCACCATaGAGTAAGTCTGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: GHPCPRGRGQKPFHTSYTPLSSP*SKSAHS
Trigger: AGAGTGAGCAGACTTACTCCATGGTGAAGACAGGGG...TGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000427468.6
ENST00000437645.5
CDS-3UTR CCA 90 bp CCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGGGGTTAAAACTCTaGGCCTCCCAGGATGGCCCC +
Preference number: 4 (lower is better)
Translates to: PRGRGQKPFHTSYTMIKQLGLKL*ASQDGP
Trigger: GGGGCCATCCTGGGAGGCCCAGAGTTTTAACCCCAG...TTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp GGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCAAGGTCCCCACAGCTCTaGGGGTCCAGGAATGTGCGA +
Preference number: 4 (lower is better)
Translates to: GRGQKPFHTSYTMIKQLPRSPQL*GSRNVR
Trigger: TCGCACATTCCTGGACCCCCAGAGCTGTGGGGACCT...TGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp GGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCAAAGCTACGAGCAGCTCCTaGCGACCGGGGAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: GQKPFHTSYTMIKQLPLKATSSS*RPGSCK
Trigger: CTTGCAGCTCCCCGGTCGCCAGGAGCTGCTCGTAGC...TTTGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp ATCTACCCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAACTGACAGATACTTCATaGCTGATGCCAGCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: IYPGHRSPANTARGPSAELTDTS*LMPAQA
Trigger: TGCCTGGGCTGGCATCAGCCATGAAGTATCTGTCAG...TTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp GACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAACTGACAGATACTTCATaGCTGATGCCAGCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: DTPVLEEGGRSPSTPAIQLTDTS*LMPAQA
Trigger: TGCCTGGGCTGGCATCAGCCATGAAGTATCTGTCAG...TTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp ACACACAGCCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTGGGCCCTGGGCACTGTaGATGGTGCCCTGGAATTAC +
Preference number: 4 (lower is better)
Translates to: THSQAEQTSVTGGLNKLSGPWAL*MVPWNY
Trigger: GTAATTCCAGGGCACCATCCACAGTGCCCAGGGCCC...ACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGGCTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp TCTGGGCTCTTTCTCATGCTAGCCTCTCTGCATGGACTCCTTTTGTCCGAGGCCGCACCTTCCCGCCTCTaGGCTCTTTCTCATGCTAGC +
Preference number: 4 (lower is better)
Translates to: SGLFLMLASLHGLLLSEAAPSRL*ALSHAS
Trigger: GCTAGCATGAGAAAGAGCCCAGAGGCGGGAAGGTGC...GGCCTCGGACAAAAGGAGTCCATGCAGAGAGGCTAGCATGAGAAAGAGCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CAGAGAATGACTGATGTAGCTGGAGATGAGGACGAGGCTCCATCCACCCAAGAACAGGGGAGCTGCTGCTaGCAGGGTAAGGCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: QRMTDVAGDEDEAPSTQEQGSCC*QGKAKG
Trigger: GCCTTTGGCCTTACCCTGCCAGCAGCAGCTCCCCTG...TTCTTGGGTGGATGGAGCCTCGTCCTCATCTCCAGCTACATCAGTCATTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp TCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTTCCCACGACCTCACTCCTCAGTaGAGGGGAGATCTACCCTGG +
Preference number: 4 (lower is better)
Translates to: SCLPKTPPTPRKEPSLSHDLTPQ*RGDLPW
Trigger: CCAGGGTAGATCTCCCCTCCACTGAGGAGTGAGGTC...GTGGGAAAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp AAATCCCTCTATGCAGAGAGATCTCAGACGCAGATTCTGGACACCCCTGTCCTCATCACCTGCACCCCCTaGCCCTGCAGCTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: KSLYAERSQTQILDTPVLITCTP*PCSWST
Trigger: AGTGCTCCAGCTGCAGGGCCAGGGGGTGCAGGTGAT...GAGGACAGGGGTGTCCAGAATCTGCGTCTGAGATCTCTCTGCATAGAGGGATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp CTCATGTACTCGGTGACAATCATCAAGGTGCTTCCTCGGGTAACAACGCCCTCCGAGAGAGTGGGAAGATaGCCACAGGCAAGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: LMYSVTIIKVLPRVTTPSERVGR*PQASRG
Trigger: TCCCCGGCTTGCCTGTGGCCATCTTCCCACTCTCTC...GGAGGGCGTTGTTACCCGAGGAAGCACCTTGATGATTGTCACCGAGTACATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000437645.5
CDS-3UTR CCA 90 bp CACTCGTGCCTGCAGGGCGCTGATCCCGCTGAGGAGGGCCTCTCGATGTTCAGCGATGCATCTTTCAGTTaGATGGCACAACATAGTTGG +
Preference number: 4 (lower is better)
Translates to: HSCLQGADPAEEGLSMFSDASFS*MAQHSW
Trigger: CCAACTATGTTGTGCCATCCAACTGAAAGATGCATC...GCTGAACATCGAGAGGCCCTCCTCAGCGGGATCAGCGCCCTGCAGGCACGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp AATGCCTCCTTAGCCAGTCAATTTCATCTAGTAAGTTCACTCATTGGCCCTGACGGAAACCCCGCCGGCTaGGCGGTCCGATCTCGCGCA +
Preference number: 4 (lower is better)
Translates to: NASLASQFHLVSSLIGPDGNPAG*AVRSRA
Trigger: TGCGCGAGATCGGACCGCTCAGCCGGCGGGGTTTCC...GTCAGGGCCAATGAGTGAACTTACTAGATGAAATTGACTGGCTAAGGAGGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR TCA 90 bp CAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCAAAGAGGAAGCCGAGCCTCTGTaGGTCGGAGGCGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: QKPFHTSYTMIKQLPLKEEAEPL*VGGAVP
Trigger: AGGGACAGCGCCTCCGACTCACAGAGGCTCGGCTTC...CTCTTTGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp GACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAAGGCTCATGTACTCGGTaGCAATCATCAAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: DTPVLEEGGRSPSTPAIQGSCTR*QSSRCF
Trigger: GAAGCACCTTGATGATTGTCACCGAGTACATGAGCC...TTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp CAGAGAATGACTGATGTAGCTGGAGATGAGGACGAGGCTCCATCCACCCAAGAACTGAAGTGGCCAAACTaGAGTGTCTCGGGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: QRMTDVAGDEDEAPSTQELKWPN*SVSGAA
Trigger: GGCCGCTCCCGAGACACTTCAGTTTGGCCACTTCAG...TTCTTGGGTGGATGGAGCCTCGTCCTCATCTCCAGCTACATCAGTCATTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp TCTGGGCTCTTTCTCATGCTAGCCTCTCTGCATGGACTCCTTTTGTCCGAGGCCCATCCTCCACAGCCTTaGTCACGTCTTGGCCAGACA +
Preference number: 4 (lower is better)
Translates to: SGLFLMLASLHGLLLSEAHPPQP*SRLGQT
Trigger: TGTCTGGCCAAGACGTGATCAAGGCTGTGGAGGATG...GGCCTCGGACAAAAGGAGTCCATGCAGAGAGGCTAGCATGAGAAAGAGCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp AGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCGTGGGGTGGGAGGCATaGGCACTGTGCATTCGTGAA +
Preference number: 4 (lower is better)
Translates to: RGQKPFHTSYTMIKQLPLVGWEA*ALCIRE
Trigger: TTCACGAATGCACAGTGCTCATGCCTCCCACCCCAC...GAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432874.7
CDS-3UTR GCA 90 bp TCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGTTCCACTCGGTCCCTaGGGATCTCATCCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SRKGAEALPHQLYNDQATVPLGP*GSHPPP
Trigger: GGGAGGAGGATGAGATCCGCAGGGACCGAGTGGAAC...AGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427468.6
ENST00000437645.5
CDS-3UTR GCA 90 bp TCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTTCCCACCTCCTTTGCCATAGCTaGAGGGCCTCCTCCAAATGG +
Preference number: 4 (lower is better)
Translates to: SCLPKTPPTPRKEPSLSHLLCHS*RASSKW
Trigger: CCATTTGGAGGAGGCCCTGCAGCTATGGCAAAGGAG...GTGGGAAAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp ATAAGGAACTCCACGGTGGGCTCAGCACAACCACTTCTGCCAGGGCTCTTCAAACTGTCCCTCAGCATATaGACGGCTACGAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: IRNSTVGSAQPLLPGLFKLSLSI*TATSSS
Trigger: GGAGCTGCTCGTAGCCGTGCATATGCTGAGGGACAG...TTTGAAGAGCCCTGGCAGAAGTGGTTGTGCTGAGCCCACCGTGGAGTTCCTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp CCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGTCCCTCAGCATATaGACGGCTACGAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PRGRGQKPFHTSYTMIKQLSLSI*TATSSS
Trigger: GGAGCTGCTCGTAGCCGTGCATATGCTGAGGGACAG...TTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp ATAAGGAACTCCACGGTGGGCTCAGCACAACCACTTCTGCCAGGGCTCTTCAAAGCTCAGCACCATCTTTaGCTGCCTGAGCCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: IRNSTVGSAQPLLPGLFKAQHHL*LPEPWP
Trigger: TGGCCAAGGCTCAGGCAGGCAAAGATGGTGCTGAGC...TTTGAAGAGCCCTGGCAGAAGTGGTTGTGCTGAGCCCACCGTGGAGTTCCTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp ATAAGGAACTCCACGGTGGGCTCAGCACAACCACTTCTGCCAGGGCTCTTCAAAACAGGGAAGTGGTGGTaGCATAGGGCAGGACCAAGG +
Preference number: 4 (lower is better)
Translates to: IRNSTVGSAQPLLPGLFKTGKWW*HRAGPR
Trigger: CCTTGGTCCTGCCCTATGGCACCACCACTTCCCTGT...TTTGAAGAGCCCTGGCAGAAGTGGTTGTGCTGAGCCCACCGTGGAGTTCCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp CAGAGAATGACTGATGTAGCTGGAGATGAGGACGAGGCTCCATCCACCCAAGAAGAGCAGGGGAGCTGCTaGTGGCAGGGTAAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: QRMTDVAGDEDEAPSTQEEQGSC*WQGKAK
Trigger: TTTGGCCTTACCCTGCCAGCAGCAGCTCCCCTGCTC...TTCTTGGGTGGATGGAGCCTCGTCCTCATCTCCAGCTACATCAGTCATTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp GGGAGCACAGTGATTGTAGTTCAGAGAGTGGGATGTGATCTTCGTAATCATCTACGCTCTCGGCTGCGGTaGCTGGGAACGTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GSTVIVVQRVGCDLRNHLRSRLR*LGTWPG
Trigger: GCCTGGCCACGTTCCCAGCCACCGCAGCCGAGAGCG...TAGATGATTACGAAGATCACATCCCACTCTCTGAACTACAATCACTGTGCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR CCA 90 bp ACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATCACCTTGTAAAACCCTaGGGGACAGGCTTCGCAGAA +
Preference number: 4 (lower is better)
Translates to: TPLSSRKGAEALPHQLYNHLVKP*GTGFAE
Trigger: TTCTGCGAAGCCTGTCCCCCAGGGTTTTACAAGGTG...ATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR CCA 90 bp AGTCTGCTCACTCTGACCGGGGAAAAGAGCAGATTGGGATGTGACTCCATTTGTGACAGGGACACGCTCTaGGGTTCCACTCGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SLLTLTGEKSRLGCDSICDRDTL*GSTRSL
Trigger: CAGGGACCGAGTGGAACCCCAGAGCGTGTCCCTGTC...ACAAATGGAGTCACATCCCAATCTGCTCTTTTCCCCGGTCAGAGTGAGCAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525749.1
CDS-3UTR CCA 90 bp CAGAGAATGACTGATGTAGCTGGAGATGAGGACGAGGCTCCATCCACCCAAGAACTGGGGTTAAAACTCTaGGCCTCCCAGGATGGCCCC +
Preference number: 4 (lower is better)
Translates to: QRMTDVAGDEDEAPSTQELGLKL*ASQDGP
Trigger: GGGGCCATCCTGGGAGGCCCAGAGTTTTAACCCCAG...TTCTTGGGTGGATGGAGCCTCGTCCTCATCTCCAGCTACATCAGTCATTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp TCTTCACCATGGAGTAAGTCTGCTCACTCTGACCGGGGAAAAGAGCAGATTGGGCTGGGGTTAAAACTCTaGGCCTCCCAGGATGGCCCC +
Preference number: 4 (lower is better)
Translates to: SSPWSKSAHSDRGKEQIGLGLKL*ASQDGP
Trigger: GGGGCCATCCTGGGAGGCCCAGAGTTTTAACCCCAG...CCCAATCTGCTCTTTTCCCCGGTCAGAGTGAGCAGACTTACTCCATGGTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000525749.1
CDS-3UTR CCA 90 bp AACATCTCTGAAACTGGGATGCATCTTTCAGTTGGATGGCACAACATAGTTGGCCGGGGCTCTGGTCCCTaGACCCTGAGGCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: NISETGMHLSVGWHNIVGRGSGP*TLRQPP
Trigger: GGGAGGCTGCCTCAGGGTCCAGGGACCAGAGCCCCG...GCCAACTATGTTGTGCCATCCAACTGAAAGATGCATCCCAGTTTCAGAGATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp AGGCACCATATCACAGACAAGTTTTTATTATCACCTGCACCCCCTGGCCCTGCAACAATGGCGGGGCTCTaGTCCCTGGACCCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: RHHITDKFLLSPAPPGPATMAGL*SLDPEA
Trigger: TGCCTCAGGGTCCAGGGACCAGAGCCCCGCCATTGT...TGCAGGGCCAGGGGGTGCAGGTGATAATAAAAACTTGTCTGTGATATGGTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp AGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCAGGGCCTCCTCCAAATaGCCAGCACACTCATCACGG +
Preference number: 4 (lower is better)
Translates to: RGQKPFHTSYTMIKQLPLRASSK*PAHSSR
Trigger: CCGTGATGAGTGTGCTGGCCATTTGGAGGAGGCCCT...GAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp CCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCTCGCATCCAGTTCCTTaGCGAACAGATGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: PCPRGRGQKPFHTSYTMISHPVP*RTDAQP
Trigger: AGGCTGTGCATCTGTTCGCCAAGGAACTGGATGCGA...GATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp AGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCCGCACGATGTGGCTATaGTCAAACTGGCCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: RGQKPFHTSYTMIKQLPLRTMWL*SNWPSV
Trigger: CACGCTGGGCCAGTTTGACCATAGCCACATCGTGCG...GAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp AGAGCAGAAGCTCCCCTCACAGCTCTCAGCAGGAAACAACCTTGCGCACATCTTCGCACGATGTGGCTATaGTCAAACTGGCCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: RAEAPLTALSRKQPCAHLRTMWL*SNWPSV
Trigger: CACGCTGGGCCAGTTTGACCATAGCCACATCGTGCG...AAGATGTGCGCAAGGTTGTTTCCTGCTGAGAGCTGTGAGGGGAGCTTCTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp ACACACAGCCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTTCCAGCCGCACGATGTaGCTATGGTCAAACTGGCCC +
Preference number: 4 (lower is better)
Translates to: THSQAEQTSVTGGLNKLSSSRTM*LWSNWP
Trigger: GGGCCAGTTTGACCATAGCCACATCGTGCGGCTGGA...ACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGGCTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp TCTGGGCTCTTTCTCATGCTAGCCTCTCTGCATGGACTCCTTTTGTCCGAGGCCCCCACGCTGTCTGACTaGTCAATGGGTCTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: SGLFLMLASLHGLLLSEAPTLSD*SMGLWE
Trigger: TTCCCACAGACCCATTGACCAGTCAGACAGCGTGGG...GGCCTCGGACAAAAGGAGTCCATGCAGAGAGGCTAGCATGAGAAAGAGCCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp TCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTTCCCACCCTGGCCAGGACTTTTaGCCTCACCCTGAACTGTCA +
Preference number: 4 (lower is better)
Translates to: SCLPKTPPTPRKEPSLSHPGQDF*PHPELS
Trigger: TGACAGTTCAGGGTGAGGCCAAAAGTCCTGGCCAGG...GTGGGAAAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CTGCCATCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTGCTAGCCTCTCTGCATaGACTCCTTTTGTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: LPSCLPKTPPTPRKEPSLASLSA*TPFVRG
Trigger: GCCTCGGACAAAAGGAGTCCATGCAGAGAGGCTAGC...AAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGATGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp AGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCCTCAGACGCAGATTCTaGACACCCCTGTCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: RGQKPFHTSYTMIKQLPLLRRRF*TPLSSR
Trigger: CCTCGAGGACAGGGGTGTCCAGAATCTGCGTCTGAG...GAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp TCTGGGCTCTTTCTCATGCTAGCCTCTCTGCATGGACTCCTTTTGTCCGAGGCCTGCAGTCACGGAGTGTaGACTGCAGTTCCACGAAGA +
Preference number: 4 (lower is better)
Translates to: SGLFLMLASLHGLLLSEACSHGV*TAVPRR
Trigger: TCTTCGTGGAACTGCAGTTCACACTCCGTGACTGCA...GGCCTCGGACAAAAGGAGTCCATGCAGAGAGGCTAGCATGAGAAAGAGCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp CAGAGAATGACTGATGTAGCTGGAGATGAGGACGAGGCTCCATCCACCCAAGAAAGATGGTCACTACGGTaGCGACAATGGCGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: QRMTDVAGDEDEAPSTQERWSLR*RQWRGS
Trigger: AGAGCCCCGCCATTGTCGTCACCGTAGTGACCATCT...TTCTTGGGTGGATGGAGCCTCGTCCTCATCTCCAGCTACATCAGTCATTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp CAGAGAATGACTGATGTAGCTGGAGATGAGGACGAGGCTCCATCCACCCAAGAAGGCTCCTCTCCAGCGTaGCGCTTTTCGCATCCAGTT +
Preference number: 4 (lower is better)
Translates to: QRMTDVAGDEDEAPSTQEGSSPA*RFSHPV
Trigger: AACTGGATGCGAAAAGCGTCACGCTGGAGAGGAGCC...TTCTTGGGTGGATGGAGCCTCGTCCTCATCTCCAGCTACATCAGTCATTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp AAATCCCTCTATGCAGAGAGATCTCAGACGCAGATTCTGGACACCCCTGTCCTCGGCTCCTCTCCAGCGTaGCGCTTTTCGCATCCAGTT +
Preference number: 4 (lower is better)
Translates to: KSLYAERSQTQILDTPVLGSSPA*RFSHPV
Trigger: AACTGGATGCGAAAAGCGTCACGCTGGAGAGGAGCC...GAGGACAGGGGTGTCCAGAATCTGCGTCTGAGATCTCTCTGCATAGAGGGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp CCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCGGCTCATGTACTCGGTaGCAATCATCAAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: PCPRGRGQKPFHTSYTMIGSCTR*QSSRCF
Trigger: GAAGCACCTTGATGATTGTCACCGAGTACATGAGCC...GATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp AGAGCAGAAGCTCCCCTCACAGCTCTCAGCAGGAAACAACCTTGCGCACATCTTCGTCACTGGCAGAGCTaGAGTGGCCAAACTGAAGTG +
Preference number: 4 (lower is better)
Translates to: RAEAPLTALSRKQPCAHLRHWQS*SGQTEV
Trigger: CACTTCAGTTTGGCCACTTCAGCTCTGCCAGTGACG...AAGATGTGCGCAAGGTTGTTTCCTGCTGAGAGCTGTGAGGGGAGCTTCTGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp GGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACGTCACTGGCAGAGCTaGAGTGGCCAAACTGAAGTG +
Preference number: 4 (lower is better)
Translates to: GRGQKPFHTSYTMIKQLPRHWQS*SGQTEV
Trigger: CACTTCAGTTTGGCCACTTCAGCTCTGCCAGTGACG...TGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp AATCCCTCTATGCAGAGAGATCTCAGACGCAGATTCTGGACACCCCTGTCCTCGCATCCTCCACAGCCTTaGTCACGTCTTGGCCAGACA +
Preference number: 4 (lower is better)
Translates to: NPSMQRDLRRRFWTPLSSHPPQP*SRLGQT
Trigger: TGTCTGGCCAAGACGTGATCAAGGCTGTGGAGGATG...CGAGGACAGGGGTGTCCAGAATCTGCGTCTGAGATCTCTCTGCATAGAGGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp CTGCCATCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTTCCTCCCTAGGGATTTaGACCTCTTTTCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: LPSCLPKTPPTPRKEPSLSSLGI*TSFQGH
Trigger: GTGCCCCTGAAAAGAGGTTCAAATCCCTAGGGAGGA...AAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGATGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp GGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAACACCAGCTATACAATaGTCAAGCAACTGCCACTCA +
Preference number: 4 (lower is better)
Translates to: GHPCPRGRGQKPFHTSYTTPAIQ*SSNCHS
Trigger: TGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGT...TGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp CAGCCAAAGAGATGCCTAGGCTCACCAGGTCCTGGGCAGTCATCTCGGCCACGGGCCTTATCAAAGAGCTaGTATTTTGCTCTCCACAGA +
Preference number: 4 (lower is better)
Translates to: QPKRCLGSPGPGQSSRPRALSKS*YFALHR
Trigger: TCTGTGGAGAGCAAAATATCAGCTCTTTGATAAGGC...CCGTGGCCGAGATGACTGCCCAGGACCTGGTGAGCCTAGGCATCTCTTTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000534097.5
CDS-3UTR GCA 90 bp GGGAGCACAGTGATTGTAGTTCAGAGAGTGGGATGTGATCTTCGTAATCATCTACCGCGGCGCCAGGGATaGTGCTGCAGTCACGGAGTG +
Preference number: 4 (lower is better)
Translates to: GSTVIVVQRVGCDLRNHLPRRQG*CCSHGV
Trigger: CACTCCGTGACTGCAGCAGCATCCCTGGCGCCGCGG...TAGATGATTACGAAGATCACATCCCACTCTCTGAACTACAATCACTGTGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR GCA 90 bp AATGCCTCCTTAGCCAGTCAATTTCATCTAGTAAGTTCACTCATTGGCCCTGACGAAGGCGCTCTCGGCTaGGGTGGCTGGGAACGTGGC +
Preference number: 4 (lower is better)
Translates to: NASLASQFHLVSSLIGPDEGALG*GGWERG
Trigger: GCCACGTTCCCAGCCACCGCAGCCGAGAGCGCCTTC...GTCAGGGCCAATGAGTGAACTTACTAGATGAAATTGACTGGCTAAGGAGGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR GCA 90 bp AATGCCTCCTTAGCCAGTCAATTTCATCTAGTAAGTTCACTCATTGGCCCTGACATCCCGCGCTGCAGCTaGAGCGGCCCACAGGCACCA +
Preference number: 4 (lower is better)
Translates to: NASLASQFHLVSSLIGPDIPRCS*SGPQAP
Trigger: TGGTGCCTGTGGGCCGCTGCAGCTGCAGCGCGGGAT...GTCAGGGCCAATGAGTGAACTTACTAGATGAAATTGACTGGCTAAGGAGGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR GCA 90 bp GGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCAAACATCCCCTCCTCCTTTaGCATAGCTGCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GQKPFHTSYTMIKQLPLKHPLLL*HSCRAS
Trigger: GGAGGCCCTGCAGCTATGGCAAAGGAGGAGGGGATG...TTTGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp ATCTACCCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAATCGAGCATTAGTCGGTaGAGAAGGTTAGGACAGTTC +
Preference number: 4 (lower is better)
Translates to: IYPGHRSPANTARGPSAESSISR*RRLGQF
Trigger: GAACTGTCCTAACCTTCTGCACCGACTAATGCTCGA...TTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp TCTGAAACTGGGATGCATCTTTCAGTTGGATGGCACAACATAGTTGGCTGTGATTGCACCCCCTGGCCCTaGAGCTGGAGCACTCGTGCC +
Preference number: 4 (lower is better)
Translates to: SETGMHLSVGWHNIVGCDCTPWP*SWSTRA
Trigger: GGCACGAGTGCTCCAGCTGCAGGGCCAGGGGGTGCA...ATCACAGCCAACTATGTTGTGCCATCCAACTGAAAGATGCATCCCAGTTTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp GGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCATGCAGCCAGTTGTCCTaGTTGGGCTCCAGCACATTG +
Preference number: 4 (lower is better)
Translates to: GRGQKPFHTSYTMIKQLPCSQLS*LGSSTL
Trigger: CAATGTGCTGGAGCCCAACCAGGACAACTGGCTGCA...TGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR CCA 90 bp GGGAGCACAGTGATTGTAGTTCAGAGAGTGGGATGTGATCTTCGTAATCATCTACCAGGCCCCGCACGGTaGCGCGGCACTGCTTGTAGT +
Preference number: 4 (lower is better)
Translates to: GSTVIVVQRVGCDLRNHLPGPAR*RGTACS
Trigger: ACTACAAGCAGTGCCGCGCCACCGTGCGGGGCCTGG...TAGATGATTACGAAGATCACATCCCACTCTCTGAACTACAATCACTGTGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR CCA 90 bp TCTGGGCTCTTTCTCATGCTAGCCTCTCTGCATGGACTCCTTTTGTCCGAGGCCCACCTTGTAAAACCCTaGGGGACAGGCTTCGCAGAA +
Preference number: 4 (lower is better)
Translates to: SGLFLMLASLHGLLLSEAHLVKP*GTGFAE
Trigger: TTCTGCGAAGCCTGTCCCCCAGGGTTTTACAAGGTG...GGCCTCGGACAAAAGGAGTCCATGCAGAGAGGCTAGCATGAGAAAGAGCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTCCCTGTGGCCCCTGTCTTCACCATaGAGTAAGTCTGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: PSRADKCHGRPKQTQSLWPLSSP*SKSAHS
Trigger: AGAGTGAGCAGACTTACTCCATGGTGAAGACAGGGG...CCACAGGGACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CCATTCCCGGGGGCCCTTGTGGATAAGGAACTCCACGGTGGGCTCAGCACAACCGAATGTGCGACGTGTTaGGACTTTGAAGTGGAAATA +
Preference number: 4 (lower is better)
Translates to: PFPGALVDKELHGGLSTTECATC*DFEVEI
Trigger: TATTTCCACTTCAAAGTCCCAACACGTCGCACATTC...GGTTGTGCTGAGCCCACCGTGGAGTTCCTTATCCACAAGGGCCCCCGGGAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp AAATCCCTCTATGCAGAGAGATCTCAGACGCAGATTCTGGACACCCCTGTCCTCCGCACGATGTGGCTATaGTCAAACTGGCCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: KSLYAERSQTQILDTPVLRTMWL*SNWPSV
Trigger: CACGCTGGGCCAGTTTGACCATAGCCACATCGTGCG...GAGGACAGGGGTGTCCAGAATCTGCGTCTGAGATCTCTCTGCATAGAGGGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp GGAAACAACCTTGCGCACATCTTGATCTTGGCTTCCAGCCTCCAGAGCTGTGGGCTGACAGATACTTCATaGCTGATGCCAGCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GNNLAHILILASSLQSCGLTDTS*LMPAQA
Trigger: TGCCTGGGCTGGCATCAGCCATGAAGTATCTGTCAG...CCCACAGCTCTGGAGGCTGGAAGCCAAGATCAAGATGTGCGCAAGGTTGTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp ATCTACCCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAACCTGGGGAGATAACATaGCCCTTTATGCTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: IYPGHRSPANTARGPSAEPGEIT*PFMLFP
Trigger: TGGGAAAAGCATAAAGGGCCATGTTATCTCCCCAGG...TTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp ATAAGGAACTCCACGGTGGGCTCAGCACAACCACTTCTGCCAGGGCTCTTCAAACACCCTCCCCATGGCTaGAGAGAAAAGCTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: IRNSTVGSAQPLLPGLFKHPPHG*REKLLG
Trigger: ACCCAAGAGCTTTTCTCTCCAGCCATGGGGAGGGTG...TTTGAAGAGCCCTGGCAGAAGTGGTTGTGCTGAGCCCACCGTGGAGTTCCTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CTGCCATCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTCCTGGGCACTGTGGATaGTGCCCTGGAATTACTTCT +
Preference number: 4 (lower is better)
Translates to: LPSCLPKTPPTPRKEPSLPGHCG*CPGITS
Trigger: AGAAGTAATTCCAGGGCACCATCCACAGTGCCCAGG...AAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGATGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR CAA 72 bp CTCTTTCTCATGCTAGCCTCTCTGCATGGACTCCTTTaGTCCGAGGCCTGCCATCTTGCCTGCCGAAAACTC +
Preference number: 4 (lower is better)
Translates to: LFLMLASLHGLL*SEACHLACRKL
Trigger: GAGTTTTCGGCAGGCAAGATGGCAGGCCTCGGACAAAAGGAGTCCATGCAGAGAGGCTAGCATGAGAAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
3UTR CAA 72 bp TCACAGCTCTCAGCAGGAAACAACCTTGCGCACATCTaGATCTTGGCTTCCAGCCTCCAGAGCTGTGGGACA +
Preference number: 4 (lower is better)
Translates to: SQLSAGNNLAHI*ILASSLQSCGT
Trigger: TGTCCCACAGCTCTGGAGGCTGGAAGCCAAGATCAAGATGTGCGCAAGGTTGTTTCCTGCTGAGAGCTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp TCCTTTATTGCCATGAAAATAAATAAACGAGAAGGCCTGTGCAAGGTGCCTAAGCCAGGTCGCCCTGCGTaGAGCTCTCGTCCGCCGCGA +
Preference number: 4 (lower is better)
Translates to: SFIAMKINKREGLCKVPKPGRPA*SSRPPR
Trigger: TCGCGGCGGACGAGAGCTTCACGCAGGGCGACCTGG...CTTAGGCACCTTGCACAGGCCTTCTCGTTTATTTATTTTCATGGCAATAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR TCA 90 bp GAAAAGAGCAGATTGGGATGTGACTCCATTTGTTACATCACAGCTAAGCTGCAAGCCCGGTGGAGACGGTaGCCTGCGCGTAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: EKSRLGCDSICYITAKLQARWRR*PARRWF
Trigger: GAACCACCTACGCGCAGGTCACCGTCTCCACCGGGC...TTGCAGCTTAGCTGTGATGTAACAAATGGAGTCACATCCCAATCTGCTCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525749.1
CDS-3UTR TCA 90 bp TCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTCGTCACTGGCAGAGCTaGAGTGGCCAAACTGAAGTG +
Preference number: 4 (lower is better)
Translates to: SRKGAEALPHQLYNDQATRHWQS*SGQTEV
Trigger: CACTTCAGTTTGGCCACTTCAGCTCTGCCAGTGACG...AGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp ACACACAGCCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTTCTTTTCAGGGGCACTaGGTTAGCCAAGGCGTTCAG +
Preference number: 4 (lower is better)
Translates to: THSQAEQTSVTGGLNKLSSFQGH*VSQGVQ
Trigger: CTGAACGCCTTGGCTAACTCAGTGCCCCTGAAAAGA...ACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGGCTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp TCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTTCCCACTTAGACCAGCCTGTTTaGGAGAGAGGACCCATCTCT +
Preference number: 4 (lower is better)
Translates to: SCLPKTPPTPRKEPSLSHLDQPV*ERGPIS
Trigger: AGAGATGGGTCCTCTCTCTCAAACAGGCTGGTCTAA...GTGGGAAAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp GCCTCTCGATGTTCAGCCAAAGAGATGCCTAGGCTCACCAGGTCCTGGGCAGTCACACCAGCTATACAATaGTCAAGCAACTGCCACTCA +
Preference number: 4 (lower is better)
Translates to: ASRCSAKEMPRLTRSWAVTPAIQ*SSNCHS
Trigger: TGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGT...GACTGCCCAGGACCTGGTGAGCCTAGGCATCTCTTTGGCTGAACATCGAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp TGGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACCAACATAGTTGGCTGTaGTGTTTCTTTCTTGGTAGG +
Preference number: 4 (lower is better)
Translates to: WTPLSSRKGAEALPHQLYQHSWL*CFFLGR
Trigger: CCTACCAAGAAAGAAACATCACAGCCAACTATGTTG...GTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp ACACACAGCCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTTCACGGAGTGTGAACTaGAGTTCCACGAAGATGCGC +
Preference number: 4 (lower is better)
Translates to: THSQAEQTSVTGGLNKLSSRSVN*SSTKMR
Trigger: GCGCATCTTCGTGGAACTGCAGTTCACACTCCGTGA...ACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGGCTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR GCA 90 bp CGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGTCACGGAGTGTGAACTaGAGTTCCACGAAGATGCGC +
Preference number: 4 (lower is better)
Translates to: RGRGQKPFHTSYTMIKQLSRSVN*SSTKMR
Trigger: GCGCATCTTCGTGGAACTGCAGTTCACACTCCGTGA...CAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR GCA 90 bp TCCTTTATTGCCATGAAAATAAATAAACGAGAAGGCCTGTGCAAGGTGCCTAAGGGCTCCCCTTCCGAGTaGGCCACGCACGTTCCGGCC +
Preference number: 4 (lower is better)
Translates to: SFIAMKINKREGLCKVPKGSPSE*ATHVPA
Trigger: GGCCGGAACGTGCGTGGCGCACTCGGAAGGGGAGCC...CTTAGGCACCTTGCACAGGCCTTCTCGTTTATTTATTTTCATGGCAATAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR GCA 90 bp GCAGAAGCTCCCCTCACAGCTCTCAGCAGGAAACAACCTTGCGCACATCTTGATGTTTTTATTATCACCTaGACCCCCTGGCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AEAPLTALSRKQPCAHLDVFIIT*TPWPCS
Trigger: GCTGCAGGGCCAGGGGGTGCAGGTGATAATAAAAAC...ATCAAGATGTGCGCAAGGTTGTTTCCTGCTGAGAGCTGTGAGGGGAGCTTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp CCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACAGTCTGGGTCCTTCTaGCAGCAGTCGAGCATTAGT +
Preference number: 4 (lower is better)
Translates to: PRGRGQKPFHTSYTMIKQQSGSF*QQSSIS
Trigger: ACTAATGCTCGACTGCTGGCAGAAGGACCCAGACTG...TTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000432874.7
CDS-3UTR CCA 90 bp GGGAGCACAGTGATTGTAGTTCAGAGAGTGGGATGTGATCTTCGTAATCATCTACGGCGCAGGTCTCCATaGTCCGCAGACCGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: GSTVIVVQRVGCDLRNHLRRRSP*SADRAV
Trigger: GACAGCTCGGTCTGCGGACCATGGAGACCTGCGCCG...TAGATGATTACGAAGATCACATCCCACTCTCTGAACTACAATCACTGTGCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR CCA 90 bp AAGAGAGAGAATGAGAGGTCTGTTCCTAATGCCCCCACTAGCCTGAGAACCCAGCTTGGTACGTGCGGATaGGACGGTCGTGTTCATCCA +
Preference number: 4 (lower is better)
Translates to: KRENERSVPNAPTSLRTQLGTCG*DGRVHP
Trigger: TGGATGAACACGACCGTCCCATCCGCACGTACCAAG...CTGGGTTCTCAGGCTAGTGGGGGCATTAGGAACAGACCTCTCATTCTCTCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR CCA 90 bp TCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTCTTGGTACGTGCGGATaGGACGGTCGTGTTCATCCA +
Preference number: 4 (lower is better)
Translates to: SRKGAEALPHQLYNDQATLGTCG*DGRVHP
Trigger: TGGATGAACACGACCGTCCCATCCGCACGTACCAAG...AGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR CCA 90 bp AAGAGAGAGAATGAGAGGTCTGTTCCTAATGCCCCCACTAGCCTGAGAACCCAGTGCAGCCAGTTGTCCTaGTTGGGCTCCAGCACATTG +
Preference number: 4 (lower is better)
Translates to: KRENERSVPNAPTSLRTQCSQLS*LGSSTL
Trigger: CAATGTGCTGGAGCCCAACCAGGACAACTGGCTGCA...CTGGGTTCTCAGGCTAGTGGGGGCATTAGGAACAGACCTCTCATTCTCTCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR CCA 90 bp GGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCAAGCTCCTCTTCATCATaGGCATCCCCTCCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: GRGQKPFHTSYTMIKQLPSSSSS*ASPPPL
Trigger: CAAAGGAGGAGGGGATGCCCATGATGAAGAGGAGCT...TGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp AATCCCTCTATGCAGAGAGATCTCAGACGCAGATTCTGGACACCCCTGTCCTCGAGCTCCTCTTCATCATaGGCATCCCCTCCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: NPSMQRDLRRRFWTPLSSSSSSS*ASPPPL
Trigger: CAAAGGAGGAGGGGATGCCCATGATGAAGAGGAGCT...CGAGGACAGGGGTGTCCAGAATCTGCGTCTGAGATCTCTCTGCATAGAGGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp CCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAAAGCTCCTCTTCATCATaGGCATCCCCTCCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: PRGRGQKPFHTSYTMIKQSSSSS*ASPPPL
Trigger: CAAAGGAGGAGGGGATGCCCATGATGAAGAGGAGCT...TTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp TGGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACGTTGGGACTTTGAAGTaGAAATACAGCTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: WTPLSSRKGAEALPHQLYVGTLK*KYSSSS
Trigger: TGAAGAGGAGCTGTATTTCCACTTCAAAGTCCCAAC...GTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp GGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAGAATGTGCGACGTGTTaGGACTTTGAAGTGGAAATA +
Preference number: 4 (lower is better)
Translates to: GHPCPRGRGQKPFHTSYTECATC*DFEVEI
Trigger: TATTTCCACTTCAAAGTCCCAACACGTCGCACATTC...TGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp CTGCCACTCAAAGAGGCACCATATCACAGACAAGTTTTTATTATCACCTGCACCGCTACGAGCAGCTCCTaGCGACCGGGGAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: LPLKEAPYHRQVFIITCTATSSS*RPGSCK
Trigger: CTTGCAGCTCCCCGGTCGCCAGGAGCTGCTCGTAGC...GGTGCAGGTGATAATAAAAACTTGTCTGTGATATGGTGCCTCTTTGAGTGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp CTGCCATCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTGGAGAGAAAAGCTCTTaGGTCCCTGGGGAGATAACA +
Preference number: 4 (lower is better)
Translates to: LPSCLPKTPPTPRKEPSLGEKSS*VPGEIT
Trigger: TGTTATCTCCCCAGGGACCCAAGAGCTTTTCTCTCC...AAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGATGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CAGAGAATGACTGATGTAGCTGGAGATGAGGACGAGGCTCCATCCACCCAAGAATGTACAGGGAAGTGGTaGTGCCATAGGGCAGGACCA +
Preference number: 4 (lower is better)
Translates to: QRMTDVAGDEDEAPSTQECTGKW*CHRAGP
Trigger: TGGTCCTGCCCTATGGCACCACCACTTCCCTGTACA...TTCTTGGGTGGATGGAGCCTCGTCCTCATCTCCAGCTACATCAGTCATTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp TCTGGGCTCTTTCTCATGCTAGCCTCTCTGCATGGACTCCTTTTGTCCGAGGCCTTCTGCAGAAACAGCTaGGGTAGGGGGAGGAGATTT +
Preference number: 4 (lower is better)
Translates to: SGLFLMLASLHGLLLSEAFCRNS*GRGRRF
Trigger: AAATCTCCTCCCCCTACCCCAGCTGTTTCTGCAGAA...GGCCTCGGACAAAAGGAGTCCATGCAGAGAGGCTAGCATGAGAAAGAGCCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CAGAGAATGACTGATGTAGCTGGAGATGAGGACGAGGCTCCATCCACCCAAGAAGACCCAACAGGATTCTaGGACCTCACTCCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: QRMTDVAGDEDEAPSTQEDPTGF*DLTPQW
Trigger: CCACTGAGGAGTGAGGTCCCAGAATCCTGTTGGGTC...TTCTTGGGTGGATGGAGCCTCGTCCTCATCTCCAGCTACATCAGTCATTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CCGCTGAGGAGGGCCTCTCGATGTTCAGCCAAAGAGATGCCTAGGCTCACCAGGCATCTTTCAGTTGGATaGCACAACATAGTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: PLRRASRCSAKEMPRLTRHLSVG*HNIVGC
Trigger: ACAGCCAACTATGTTGTGCCATCCAACTGAAAGATG...CCTGGTGAGCCTAGGCATCTCTTTGGCTGAACATCGAGAGGCCCTCCTCAGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp GGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAGATGCATCTTTCAGTTaGATGGCACAACATAGTTGG +
Preference number: 4 (lower is better)
Translates to: GHPCPRGRGQKPFHTSYTDASFS*MAQHSW
Trigger: CCAACTATGTTGTGCCATCCAACTGAAAGATGCATC...TGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp AAGAGAGAGAATGAGAGGTCTGTTCCTAATGCCCCCACTAGCCTGAGAACCCAGGGCAGGAGAATTGCTTaGACCCAGGAGGTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: KRENERSVPNAPTSLRTQGRRIA*TQEVEV
Trigger: AACTTCCACCTCCTGGGTTCAAGCAATTCTCCTGCC...CTGGGTTCTCAGGCTAGTGGGGGCATTAGGAACAGACCTCTCATTCTCTCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR TCA 90 bp ACACACAGCCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTGGCTCATGTACTCGGTaGCAATCATCAAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: THSQAEQTSVTGGLNKLSGSCTR*QSSRCF
Trigger: GAAGCACCTTGATGATTGTCACCGAGTACATGAGCC...ACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGGCTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp TCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTTCCACAGAGGGAAGATaGTGCGAAGAGAGAGTGGGA +
Preference number: 4 (lower is better)
Translates to: SRKGAEALPHQLYNDQATSTEGR*CEERVG
Trigger: TCCCACTCTCTCTTCGCATCATCTTCCCTCTGTGGA...AGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000534097.5
CDS-3UTR TCA 90 bp AGGCACCATATCACAGACAAGTTTTTATTATCACCTGCACCCCCTGGCCCTGCAGGCCTGTCTCCTCTGTaGAATGGGGATTCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: RHHITDKFLLSPAPPGPAGLSPL*NGDSSL
Trigger: CAGAGAGGAATCCCCATTTCACAGAGGAGACAGGCC...TGCAGGGCCAGGGGGTGCAGGTGATAATAAAAACTTGTCTGTGATATGGTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000437645.5
CDS-3UTR GCA 90 bp GGGAGCACAGTGATTGTAGTTCAGAGAGTGGGATGTGATCTTCGTAATCATCTATCCACGAAGATGCGCTaGCCGCGGCCACGGCTTATC +
Preference number: 4 (lower is better)
Translates to: GSTVIVVQRVGCDLRNHLSTKMR*PRPRLI
Trigger: GATAAGCCGTGGCCGCGGGCAGCGCATCTTCGTGGA...TAGATGATTACGAAGATCACATCCCACTCTCTGAACTACAATCACTGTGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR GCA 90 bp TCCTTTATTGCCATGAAAATAAATAAACGAGAAGGCCTGTGCAAGGTGCCTAAGGCAGTTCCACGAAGATaGGCTGCCCGCGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: SFIAMKINKREGLCKVPKAVPRR*AARGHG
Trigger: GCCGTGGCCGCGGGCAGCGCATCTTCGTGGAACTGC...CTTAGGCACCTTGCACAGGCCTTCTCGTTTATTTATTTTCATGGCAATAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR GCA 90 bp GGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCAAATGTTCAGCTTCATCTTaGGCTCACCCAGGTCGCCCT +
Preference number: 4 (lower is better)
Translates to: GQKPFHTSYTMIKQLPLKCSASS*AHPGRP
Trigger: AGGGCGACCTGGGTGAGCGCAAGATGAAGCTGAACA...TTTGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR GCA 90 bp TCCTTTATTGCCATGAAAATAAATAAACGAGAAGGCCTGTGCAAGGTGCCTAAGCCTGGAATCCCGCGCTaGAGCTGCAGCGGCCCACAG +
Preference number: 4 (lower is better)
Translates to: SFIAMKINKREGLCKVPKPGIPR*SCSGPQ
Trigger: CTGTGGGCCGCTGCAGCTGCAGCGCGGGATTCCAGG...CTTAGGCACCTTGCACAGGCCTTCTCGTTTATTTATTTTCATGGCAATAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR GCA 90 bp GGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCAAACTCCTTTGCCATAGCTaGAGGGCCTCCTCCAAATGG +
Preference number: 4 (lower is better)
Translates to: GQKPFHTSYTMIKQLPLKLLCHS*RASSKW
Trigger: CCATTTGGAGGAGGCCCTGCAGCTATGGCAAAGGAG...TTTGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp TCTGAAACTGGGATGCATCTTTCAGTTGGATGGCACAACATAGTTGGCTGTGATCAGCACATGGCGAGCTaGCAGGCCCCGGTGAACGTA +
Preference number: 4 (lower is better)
Translates to: SETGMHLSVGWHNIVGCDQHMAS*QAPVNV
Trigger: TACGTTCACCGGGGCCTGGCAGCTCGCCATGTGCTG...ATCACAGCCAACTATGTTGTGCCATCCAACTGAAAGATGCATCCCAGTTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp TTCCAGCCTCCAGAGCTGTGGGACAGTAAATCCCTCTATGCAGAGAGATCTCAGGTTTTTATTATCACCTaGACCCCCTGGCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FQPPELWDSKSLYAERSQVFIIT*TPWPCS
Trigger: GCTGCAGGGCCAGGGGGTGCAGGTGATAATAAAAAC...CTGAGATCTCTCTGCATAGAGGGATTTACTGTCCCACAGCTCTGGAGGCTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp TCCTTTATTGCCATGAAAATAAATAAACGAGAAGGCCTGTGCAAGGTGCCTAAGGAGGCGCAGCGGGTGTaGACCGGCGCAGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: SFIAMKINKREGLCKVPKEAQRV*TGAGLH
Trigger: ATGGAGACCTGCGCCGGTCCACACCCGCTGCGCCTC...CTTAGGCACCTTGCACAGGCCTTCTCGTTTATTTATTTTCATGGCAATAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR CCA 90 bp GGGAGCACAGTGATTGTAGTTCAGAGAGTGGGATGTGATCTTCGTAATCATCTACAGCCCAGCTCGGCCTaGGAGGCTTTGGAATCCAGG +
Preference number: 4 (lower is better)
Translates to: GSTVIVVQRVGCDLRNHLQPSSA*EALESR
Trigger: CCTGGATTCCAAAGCCTCCCAGGCCGAGCTGGGCTG...TAGATGATTACGAAGATCACATCCCACTCTCTGAACTACAATCACTGTGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR CCA 90 bp CACTCCTCAGTGGAGGGGAGATCTACCCTGGACACCGAAGTCCTGCCAACACAGGTTGGGACTTTGAAGTaGAAATACAGCTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: HSSVEGRSTLDTEVLPTQVGTLK*KYSSSS
Trigger: TGAAGAGGAGCTGTATTTCCACTTCAAAGTCCCAAC...CTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGATCTCCCCTCCACTGAGGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp TTCCAGCCTCCAGAGCTGTGGGACAGTAAATCCCTCTATGCAGAGAGATCTCAGTCGCATCCAGTTCCTTaGCGAACAGATGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: FQPPELWDSKSLYAERSQSHPVP*RTDAQP
Trigger: AGGCTGTGCATCTGTTCGCCAAGGAACTGGATGCGA...CTGAGATCTCTCTGCATAGAGGGATTTACTGTCCCACAGCTCTGGAGGCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp TCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTTCGCATCCAGTTCCTTaGCGAACAGATGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: SRKGAEALPHQLYNDQATSHPVP*RTDAQP
Trigger: AGGCTGTGCATCTGTTCGCCAAGGAACTGGATGCGA...AGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp CAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCAAAGAGTCCAGCCGCACGATGTaGCTATGGTCAAACTGGCCC +
Preference number: 4 (lower is better)
Translates to: QKPFHTSYTMIKQLPLKESSRTM*LWSNWP
Trigger: GGGCCAGTTTGACCATAGCCACATCGTGCGGCTGGA...CTCTTTGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp CAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCAAAGAGAGGATGCTGTGGATCTaGGAGAACCTGGGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: QKPFHTSYTMIKQLPLKERMLWI*ENLGRS
Trigger: TGAGCGGCCCAGGTTCTCCCAGATCCACAGCATCCT...CTCTTTGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR CCA 90 bp CAGAGAATGACTGATGTAGCTGGAGATGAGGACGAGGCTCCATCCACCCAAGAAAAGCTCTTGGGTCCCTaGGGAGATAACATGGCCCTT +
Preference number: 4 (lower is better)
Translates to: QRMTDVAGDEDEAPSTQEKLLGP*GDNMAL
Trigger: AAGGGCCATGTTATCTCCCCAGGGACCCAAGAGCTT...TTCTTGGGTGGATGGAGCCTCGTCCTCATCTCCAGCTACATCAGTCATTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CTGCCATCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTCTGTGGATGGTGCCCTaGAATTACTTCTTGGTACCT +
Preference number: 4 (lower is better)
Translates to: LPSCLPKTPPTPRKEPSLLWMVP*NYFLVP
Trigger: AGGTACCAAGAAGTAATTCCAGGGCACCATCCACAG...AAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGATGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CCA 90 bp CAGAGAATGACTGATGTAGCTGGAGATGAGGACGAGGCTCCATCCACCCAAGAACACACATTAAGAGAGTaGCTATCTCCCCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: QRMTDVAGDEDEAPSTQEHTLRE*LSPPPA
Trigger: GGCTGGAGGGGGAGATAGCCACTCTCTTAATGTGTG...TTCTTGGGTGGATGGAGCCTCGTCCTCATCTCCAGCTACATCAGTCATTCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR TCA 90 bp CAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCAAAGAGCAGATACTTCATGGCTaGTGCCAGCCCAGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: QKPFHTSYTMIKQLPLKEQILHG*CQPRQQ
Trigger: TTGCTGCCTGGGCTGGCATCAGCCATGAAGTATCTG...CTCTTTGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp CGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGTCGAGCATTAGTCGGTaGAGAAGGTTAGGACAGTTC +
Preference number: 4 (lower is better)
Translates to: RGRGQKPFHTSYTMIKQLSSISR*RRLGQF
Trigger: GAACTGTCCTAACCTTCTGCACCGACTAATGCTCGA...CAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp AGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCTCGAGCATTAGTCGGTaGAGAAGGTTAGGACAGTTC +
Preference number: 4 (lower is better)
Translates to: RGQKPFHTSYTMIKQLPLSSISR*RRLGQF
Trigger: GAACTGTCCTAACCTTCTGCACCGACTAATGCTCGA...GAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp GGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCAAAGTTCAGCCAAAGAGATaGCTAGGCTCACCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: GQKPFHTSYTMIKQLPLKVQPKR*LGSPGP
Trigger: AGGACCTGGTGAGCCTAGGCATCTCTTTGGCTGAAC...TTTGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp CACATCTTGATCTTGGCTTCCAGCCTCCAGAGCTGTGGGACAGTAAATCCCTCTAAGTTTTTATTATCCTaGACCCCCTGGCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: HILILASSLQSCGTVNPSKFLLS*TPWPCS
Trigger: GCTGCAGGGCCAGGGGGTGCAGGATAATAAAAACTT...AGAGGGATTTACTGTCCCACAGCTCTGGAGGCTGGAAGCCAAGATCAAGATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000432874.7
CDS-3UTR GCA 90 bp CAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCAAAGAGAGGCCTGGGTCCTTCTaGCAGCAGTCGAGCATTAGT +
Preference number: 4 (lower is better)
Translates to: QKPFHTSYTMIKQLPLKERPGSF*QQSSIS
Trigger: ACTAATGCTCGACTGCTGGCAGAAGGACCCAGGCCT...CTCTTTGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp AATGCCTCCTTAGCCAGTCAATTTCATCTAGTAAGTTCACTCATTGGCCCTGACAAGTCACCACGCTCCTaGAATCCCGCGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: NASLASQFHLVSSLIGPDKSPRS*NPALQL
Trigger: CAGCTGCAGCGCGGGATTCCAGGAGCGTGGTGACTT...GTCAGGGCCAATGAGTGAACTTACTAGATGAAATTGACTGGCTAAGGAGGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR CCA 90 bp TCTTCACCATGGAGTAAGTCTGCTCACTCTGACCGGGGAAAAGAGCAGATTGGGCCCCTGTCTTCACCATaGAGTAAGTCTGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: SSPWSKSAHSDRGKEQIGPLSSP*SKSAHS
Trigger: AGAGTGAGCAGACTTACTCCATGGTGAAGACAGGGG...CCCAATCTGCTCTTTTCCCCGGTCAGAGTGAGCAGACTTACTCCATGGTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525749.1
CDS-3UTR CCA 90 bp CTGCCACTCAAAGAGGCACCATATCACAGACAAGTTTTTATTATCACCTGCACCTGGCTATGGTCAAACTaGCCCAGCGTGAGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LPLKEAPYHRQVFIITCTWLWSN*PSVRAS
Trigger: CGAGGCCCTCACGCTGGGCCAGTTTGACCATAGCCA...GGTGCAGGTGATAATAAAAACTTGTCTGTGATATGGTGCCTCTTTGAGTGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp CTGCCACTCAAAGAGGCACCATATCACAGACAAGTTTTTATTATCACCTGCACCGAGAGAGTGGGAAGATaGCCACAGGCAAGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: LPLKEAPYHRQVFIITCTERVGR*PQASRG
Trigger: TCCCCGGCTTGCCTGTGGCCATCTTCCCACTCTCTC...GGTGCAGGTGATAATAAAAACTTGTCTGTGATATGGTGCCTCTTTGAGTGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp AATGCCTCCTTAGCCAGTCAATTTCATCTAGTAAGTTCACTCATTGGCCCTGACATGCCCCCACTAGCCTaGGAACCCAGCAAAACCCTC +
Preference number: 4 (lower is better)
Translates to: NASLASQFHLVSSLIGPDMPPLA*EPSKTL
Trigger: GAGGGTTTTGCTGGGTTCTCAGGCTAGTGGGGGCAT...GTCAGGGCCAATGAGTGAACTTACTAGATGAAATTGACTGGCTAAGGAGGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR TCA 90 bp CTCTCAGCAGGAAACAACCTTGCGCACATCTTGATCTTGGCTTCCAGCCTCCAGACACCAGCTATACAATaGTCAAGCAACTGCCACTCA +
Preference number: 4 (lower is better)
Translates to: LSAGNNLAHILILASSLQTPAIQ*SSNCHS
Trigger: TGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGT...CTGGAGGCTGGAAGCCAAGATCAAGATGTGCGCAAGGTTGTTTCCTGCTGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp CGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGACACCAGCTATACAATaGTCAAGCAACTGCCACTCA +
Preference number: 4 (lower is better)
Translates to: RGRGQKPFHTSYTMIKQLTPAIQ*SSNCHS
Trigger: TGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGT...CAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp TCCTTTATTGCCATGAAAATAAATAAACGAGAAGGCCTGTGCAAGGTGCCTAAGCGATCGTGTCGATTTTaGGGGGCCGGCTGCCGCCTA +
Preference number: 4 (lower is better)
Translates to: SFIAMKINKREGLCKVPKRSCRF*GAGCRL
Trigger: TAGGCGGCAGCCGGCCCCGCAAAATCGACACGATCG...CTTAGGCACCTTGCACAGGCCTTCTCGTTTATTTATTTTCATGGCAATAAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR GCA 90 bp AAGAGAGAGAATGAGAGGTCTGTTCCTAATGCCCCCACTAGCCTGAGAACCCAGTGCCAGCCTCTAACTTaGAAGTATTTGGTCCGTGAC +
Preference number: 4 (lower is better)
Translates to: KRENERSVPNAPTSLRTQCQPLT*KYLVRD
Trigger: GTCACGGACCAAATACTTGCAAGTTAGAGGCTGGCA...CTGGGTTCTCAGGCTAGTGGGGGCATTAGGAACAGACCTCTCATTCTCTCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR GCA 90 bp CAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCAAAGAGGTTCAGCCAAAGAGATaGCTAGGCTCACCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: QKPFHTSYTMIKQLPLKEVQPKR*LGSPGP
Trigger: AGGACCTGGTGAGCCTAGGCATCTCTTTGGCTGAAC...CTCTTTGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp CAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCAAAGAGGTTTTTATTATCACCTaGACCCCCTGGCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QKPFHTSYTMIKQLPLKEVFIIT*TPWPCS
Trigger: GCTGCAGGGCCAGGGGGTGCAGGTGATAATAAAAAC...CTCTTTGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000427468.6
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp CACATCTTGATCTTGGCTTCCAGCCTCCAGAGCTGTGGGACAGTAAATCCCTCTGGTCACAGACCCTTCTaGCATCCTCTTCCCTATAAT +
Preference number: 4 (lower is better)
Translates to: HILILASSLQSCGTVNPSGHRPF*HPLPYN
Trigger: ATTATAGGGAAGAGGATGGCAGAAGGGTCTGTGACC...AGAGGGATTTACTGTCCCACAGCTCTGGAGGCTGGAAGCCAAGATCAAGATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432874.7
CDS-3UTR CCA 90 bp AATGCCTCCTTAGCCAGTCAATTTCATCTAGTAAGTTCACTCATTGGCCCTGACCTCCCACCCATTACTTaGCAGTGCAGTCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: NASLASQFHLVSSLIGPDLPPIT*QCSPAQ
Trigger: CTGGGCTGGACTGCACTGCCAAGTAATGGGTGGGAG...GTCAGGGCCAATGAGTGAACTTACTAGATGAAATTGACTGGCTAAGGAGGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR CCA 90 bp GCTCCCCTCACAGCTCTCAGCAGGAAACAACCTTGCGCACATCTTGATCTTGGCCATCTTTCAGTTGGATaGCACAACATAGTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: APLTALSRKQPCAHLDLGHLSVG*HNIVGC
Trigger: ACAGCCAACTATGTTGTGCCATCCAACTGAAAGATG...GCCAAGATCAAGATGTGCGCAAGGTTGTTTCCTGCTGAGAGCTGTGAGGGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp GGGAGCACAGTGATTGTAGTTCAGAGAGTGGGATGTGATCTTCGTAATCATCTAGCAAAACCCTCAACATaGAGGATCTCCCCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GSTVIVVQRVGCDLRNHLAKPST*RISPRE
Trigger: CTCCCTGGGGGAGATCCTTCATGTTGAGGGTTTTGC...TAGATGATTACGAAGATCACATCCCACTCTCTGAACTACAATCACTGTGCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR TCA 90 bp CTGCCACTCAAAGAGGCACCATATCACAGACAAGTTTTTATTATCACCTGCACCCAGATACTTCATGGCTaGTGCCAGCCCAGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: LPLKEAPYHRQVFIITCTQILHG*CQPRQQ
Trigger: TTGCTGCCTGGGCTGGCATCAGCCATGAAGTATCTG...GGTGCAGGTGATAATAAAAACTTGTCTGTGATATGGTGCCTCTTTGAGTGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp CCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACAACATAGTTGGCTGTaGTGTTTCTTTCTTGGTAGG +
Preference number: 4 (lower is better)
Translates to: PRGRGQKPFHTSYTMIKQQHSWL*CFFLGR
Trigger: CCTACCAAGAAAGAAACATCACAGCCAACTATGTTG...TTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp TCCTTTATTGCCATGAAAATAAATAAACGAGAAGGCCTGTGCAAGGTGCCTAAGCCCATTACTTGGCAGTaGAGTCCAGCCCAGCTCGGC +
Preference number: 4 (lower is better)
Translates to: SFIAMKINKREGLCKVPKPITWQ*SPAQLG
Trigger: GCCGAGCTGGGCTGGACTGCACTGCCAAGTAATGGG...CTTAGGCACCTTGCACAGGCCTTCTCGTTTATTTATTTTCATGGCAATAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR GCA 90 bp GGGAGCACAGTGATTGTAGTTCAGAGAGTGGGATGTGATCTTCGTAATCATCTATGTTCAGCTTCATCTTaGGCTCACCCAGGTCGCCCT +
Preference number: 4 (lower is better)
Translates to: GSTVIVVQRVGCDLRNHLCSASS*AHPGRP
Trigger: AGGGCGACCTGGGTGAGCGCAAGATGAAGCTGAACA...TAGATGATTACGAAGATCACATCCCACTCTCTGAACTACAATCACTGTGCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR CCA 90 bp CTCTCAGCAGGAAACAACCTTGCGCACATCTTGATCTTGGCTTCCAGCCTCCAGGTTGGGACTTTGAAGTaGAAATACAGCTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LSAGNNLAHILILASSLQVGTLK*KYSSSS
Trigger: TGAAGAGGAGCTGTATTTCCACTTCAAAGTCCCAAC...CTGGAGGCTGGAAGCCAAGATCAAGATGTGCGCAAGGTTGTTTCCTGCTGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp AGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCGAATGTGCGACGTGTTaGGACTTTGAAGTGGAAATA +
Preference number: 4 (lower is better)
Translates to: RGQKPFHTSYTMIKQLPLECATC*DFEVEI
Trigger: TATTTCCACTTCAAAGTCCCAACACGTCGCACATTC...GAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp CTCTCAGCAGGAAACAACCTTGCGCACATCTTGATCTTGGCTTCCAGCCTCCAGGAATGTGCGACGTGTTaGGACTTTGAAGTGGAAATA +
Preference number: 4 (lower is better)
Translates to: LSAGNNLAHILILASSLQECATC*DFEVEI
Trigger: TATTTCCACTTCAAAGTCCCAACACGTCGCACATTC...CTGGAGGCTGGAAGCCAAGATCAAGATGTGCGCAAGGTTGTTTCCTGCTGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp TCCTTTATTGCCATGAAAATAAATAAACGAGAAGGCCTGTGCAAGGTGCCTAAGGTTCATCCACGCCGCTaGTCTCCTCCCACCCATTAC +
Preference number: 4 (lower is better)
Translates to: SFIAMKINKREGLCKVPKVHPRR*SPPTHY
Trigger: GTAATGGGTGGGAGGAGATCAGCGGCGTGGATGAAC...CTTAGGCACCTTGCACAGGCCTTCTCGTTTATTTATTTTCATGGCAATAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR GCA 90 bp GGGAGCACAGTGATTGTAGTTCAGAGAGTGGGATGTGATCTTCGTAATCATCTACTTATCCAGCCAGTCTaGAGCCAGTTGTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: GSTVIVVQRVGCDLRNHLLIQPV*SQLSWL
Trigger: CAACCAGGACAACTGGCTGCAGACTGGCTGGATAAG...TAGATGATTACGAAGATCACATCCCACTCTCTGAACTACAATCACTGTGCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR CCA 90 bp TCCTTTATTGCCATGAAAATAAATAAACGAGAAGGCCTGTGCAAGGTGCCTAAGCGGCCCCCAGCCAACTaGATACCTTCGCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: SFIAMKINKREGLCKVPKRPPAN*IPSQKS
Trigger: TGACTTCTGCGAAGGTATCCAGTTGGCTGGGGGCCG...CTTAGGCACCTTGCACAGGCCTTCTCGTTTATTTATTTTCATGGCAATAAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR CCA 90 bp GGGAGCACAGTGATTGTAGTTCAGAGAGTGGGATGTGATCTTCGTAATCATCTACTCATTGGCCCTGACTaGACTCACTGGAAACTCCAC +
Preference number: 4 (lower is better)
Translates to: GSTVIVVQRVGCDLRNHLLIGPD*THWKLH
Trigger: GTGGAGTTTCCAGTGAGTCCAGTCAGGGCCAATGAG...TAGATGATTACGAAGATCACATCCCACTCTCTGAACTACAATCACTGTGCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR CCA 90 bp TTCCAGCCTCCAGAGCTGTGGGACAGTAAATCCCTCTATGCAGAGAGATCTCAGGTTGGGACTTTGAAGTaGAAATACAGCTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: FQPPELWDSKSLYAERSQVGTLK*KYSSSS
Trigger: TGAAGAGGAGCTGTATTTCCACTTCAAAGTCCCAAC...CTGAGATCTCTCTGCATAGAGGGATTTACTGTCCCACAGCTCTGGAGGCTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp AAACTTGGTAAGCAACATTCTCCAGTTAGCCTTATCAAAGAGCTGATATTTTGCAGGCTCACCAGGTCCTaGGCAGTCATCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: KLGKQHSPVSLIKELIFCRLTRS*AVISAT
Trigger: CGTGGCCGAGATGACTGCCCAGGACCTGGTGAGCCT...GCAAAATATCAGCTCTTTGATAAGGCTAACTGGAGAATGTTGCTTACCAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000534097.5
CDS-3UTR TCA 90 bp GGGAGCACAGTGATTGTAGTTCAGAGAGTGGGATGTGATCTTCGTAATCATCTATTCACTCATTGGCCCTaGCTGGACTCACTGGAAACT +
Preference number: 4 (lower is better)
Translates to: GSTVIVVQRVGCDLRNHLFTHWP*LDSLET
Trigger: AGTTTCCAGTGAGTCCAGTCAGGGCCAATGAGTGAA...TAGATGATTACGAAGATCACATCCCACTCTCTGAACTACAATCACTGTGCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR TCA 90 bp TCTGAAACTGGGATGCATCTTTCAGTTGGATGGCACAACATAGTTGGCTGTGATGGCTCATGTACTCGGTaGCAATCATCAAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: SETGMHLSVGWHNIVGCDGSCTR*QSSRCF
Trigger: GAAGCACCTTGATGATTGTCACCGAGTACATGAGCC...ATCACAGCCAACTATGTTGTGCCATCCAACTGAAAGATGCATCCCAGTTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp AACTGCCACTCAAAGAGGCACCATATCACAGACAAGTTTTTATTATCACCTGCACGTCACTGGCAGAGCTaGAGTGGCCAAACTGAAGTG +
Preference number: 4 (lower is better)
Translates to: NCHSKRHHITDKFLLSPARHWQS*SGQTEV
Trigger: CACTTCAGTTTGGCCACTTCAGCTCTGCCAGTGACG...TGCAGGTGATAATAAAAACTTGTCTGTGATATGGTGCCTCTTTGAGTGGCAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437645.5
ENST00000534097.5
CDS-3UTR GCA 90 bp TCCTTTATTGCCATGAAAATAAATAAACGAGAAGGCCTGTGCAAGGTGCCTAAGTGCACACTTGGTACGTaGGGATGGGACGGTCGTGTT +
Preference number: 4 (lower is better)
Translates to: SFIAMKINKREGLCKVPKCTLGT*GWDGRV
Trigger: AACACGACCGTCCCATCCGCACGTACCAAGTGTGCA...CTTAGGCACCTTGCACAGGCCTTCTCGTTTATTTATTTTCATGGCAATAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR GCA 90 bp TCCTTTATTGCCATGAAAATAAATAAACGAGAAGGCCTGTGCAAGGTGCCTAAGTGGGCTCCAGCACATTaGACACTTGGTACGTGCGGA +
Preference number: 4 (lower is better)
Translates to: SFIAMKINKREGLCKVPKWAPAH*TLGTCG
Trigger: TCCGCACGTACCAAGTGTGCAATGTGCTGGAGCCCA...CTTAGGCACCTTGCACAGGCCTTCTCGTTTATTTATTTTCATGGCAATAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR GCA 90 bp TCCTTTATTGCCATGAAAATAAATAAACGAGAAGGCCTGTGCAAGGTGCCTAAGCCAAGATCAAGCCAGTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: SFIAMKINKREGLCKVPKPRSSQ*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCACTGGCTTGATCTTGG...CTTAGGCACCTTGCACAGGCCTTCTCGTTTATTTATTTTCATGGCAATAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR CCA 90 bp AATGCCTCCTTAGCCAGTCAATTTCATCTAGTAAGTTCACTCATTGGCCCTGACCTTGAACCCAGGAGGTaGAAGTTGCAGTTAGCCAAG +
Preference number: 4 (lower is better)
Translates to: NASLASQFHLVSSLIGPDLEPRR*KLQLAK
Trigger: CTTGGCTAACTGCAACTTCCACCTCCTGGGTTCAAG...GTCAGGGCCAATGAGTGAACTTACTAGATGAAATTGACTGGCTAAGGAGGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR CCA 90 bp CTGCCACTCAAAGAGGCACCATATCACAGACAAGTTTTTATTATCACCTGCACCCCCCTGTCTTCACCATaGAGTAAGTCTGCTCACTCT +
Preference number: 4 (lower is better)
Translates to: LPLKEAPYHRQVFIITCTPLSSP*SKSAHS
Trigger: AGAGTGAGCAGACTTACTCCATGGTGAAGACAGGGG...GGTGCAGGTGATAATAAAAACTTGTCTGTGATATGGTGCCTCTTTGAGTGGCAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000437645.5
CDS-3UTR CCA 90 bp TCAAAGAAACTTGGTAAGCAACATTCTCCAGTTAGCCTTATCAAAGAGCTGATACTGGGGTTAAAACTCTaGGCCTCCCAGGATGGCCCC +
Preference number: 4 (lower is better)
Translates to: SKKLGKQHSPVSLIKELILGLKL*ASQDGP
Trigger: GGGGCCATCCTGGGAGGCCCAGAGTTTTAACCCCAG...TATCAGCTCTTTGATAAGGCTAACTGGAGAATGTTGCTTACCAAGTTTCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432874.7
ENST00000534097.5
CDS-3UTR CCA 90 bp GGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCAAAGTTGGGACTTTGAAGTaGAAATACAGCTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: GQKPFHTSYTMIKQLPLKVGTLK*KYSSSS
Trigger: TGAAGAGGAGCTGTATTTCCACTTCAAAGTCCCAAC...TTTGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp CATCTTGATCTTGGCTTCCAGCCTCCAGAGCTGTGGGACAGTAAATCCCTCTATCATCTTTCAGTTGGATaGCACAACATAGTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: HLDLGFQPPELWDSKSLYHLSVG*HNIVGC
Trigger: ACAGCCAACTATGTTGTGCCATCCAACTGAAAGATG...ATAGAGGGATTTACTGTCCCACAGCTCTGGAGGCTGGAAGCCAAGATCAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp TCCTTTATTGCCATGAAAATAAATAAACGAGAAGGCCTGTGCAAGGTGCCTAAGTGCAGTCACGGAGTGTaGACTGCAGTTCCACGAAGA +
Preference number: 4 (lower is better)
Translates to: SFIAMKINKREGLCKVPKCSHGV*TAVPRR
Trigger: TCTTCGTGGAACTGCAGTTCACACTCCGTGACTGCA...CTTAGGCACCTTGCACAGGCCTTCTCGTTTATTTATTTTCATGGCAATAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR GCA 90 bp TCCTTTATTGCCATGAAAATAAATAAACGAGAAGGCCTGTGCAAGGTGCCTAAGTCACGGAGTGTGAACTaGAGTTCCACGAAGATGCGC +
Preference number: 4 (lower is better)
Translates to: SFIAMKINKREGLCKVPKSRSVN*SSTKMR
Trigger: GCGCATCTTCGTGGAACTGCAGTTCACACTCCGTGA...CTTAGGCACCTTGCACAGGCCTTCTCGTTTATTTATTTTCATGGCAATAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR GCA 90 bp AATGCCTCCTTAGCCAGTCAATTTCATCTAGTAAGTTCACTCATTGGCCCTGACACACTCTCTCTCAATTaGCACCTACGCTCTACACTC +
Preference number: 4 (lower is better)
Translates to: NASLASQFHLVSSLIGPDTLSLN*HLRSTL
Trigger: GAGTGTAGAGCGTAGGTGGCAATTGAGAGAGAGTGT...GTCAGGGCCAATGAGTGAACTTACTAGATGAAATTGACTGGCTAAGGAGGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR GCA 90 bp AACATCTCTGAAACTGGGATGCATCTTTCAGTTGGATGGCACAACATAGTTGGCTCGAGCATTAGTCGGTaGAGAAGGTTAGGACAGTTC +
Preference number: 4 (lower is better)
Translates to: NISETGMHLSVGWHNIVGSSISR*RRLGQF
Trigger: GAACTGTCCTAACCTTCTGCACCGACTAATGCTCGA...GCCAACTATGTTGTGCCATCCAACTGAAAGATGCATCCCAGTTTCAGAGATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CCA 90 bp GGGAGCACAGTGATTGTAGTTCAGAGAGTGGGATGTGATCTTCGTAATCATCTACCTGACTGGACTCACTaGAAACTCCACAAGACTTCA +
Preference number: 4 (lower is better)
Translates to: GSTVIVVQRVGCDLRNHLPDWTH*KLHKTS
Trigger: TGAAGTCTTGTGGAGTTTCCAGTGAGTCCAGTCAGG...TAGATGATTACGAAGATCACATCCCACTCTCTGAACTACAATCACTGTGCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR TCA 90 bp GATCAAGCAACTGCCACTCAAAGAGGCACCATATCACAGACAAGTTTTTATTATGGCTCATGTACTCGGTaGCAATCATCAAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: DQATATQRGTISQTSFYYGSCTR*QSSRCF
Trigger: GAAGCACCTTGATGATTGTCACCGAGTACATGAGCC...ATAATAAAAACTTGTCTGTGATATGGTGCCTCTTTGAGTGGCAGTTGCTTGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR TCA 90 bp TCCTTTATTGCCATGAAAATAAATAAACGAGAAGGCCTGTGCAAGGTGCCTAAGTTCTTCCTTATGCACTaGGGAGACCTCATGATGTCA +
Preference number: 4 (lower is better)
Translates to: SFIAMKINKREGLCKVPKFFLMH*GDLMMS
Trigger: TGACATCATGAGGTCTCCTCAGTGCATAAGGAAGAA...CTTAGGCACCTTGCACAGGCCTTCTCGTTTATTTATTTTCATGGCAATAAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR CCA 90 bp AACATCTCTGAAACTGGGATGCATCTTTCAGTTGGATGGCACAACATAGTTGGCAGTGACTCCAGATCATaGACTGTTTCCAGCTTAAAT +
Preference number: 4 (lower is better)
Translates to: NISETGMHLSVGWHNIVGSDSRS*TVSSLN
Trigger: ATTTAAGCTGGAAACAGTCCATGATCTGGAGTCACT...GCCAACTATGTTGTGCCATCCAACTGAAAGATGCATCCCAGTTTCAGAGATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437645.5
CDS-3UTR CCA 90 bp AACTGCCACTCAAAGAGGCACCATATCACAGACAAGTTTTTATTATCACCTGCAGAATGTGCGACGTGTTaGGACTTTGAAGTGGAAATA +
Preference number: 4 (lower is better)
Translates to: NCHSKRHHITDKFLLSPAECATC*DFEVEI
Trigger: TATTTCCACTTCAAAGTCCCAACACGTCGCACATTC...TGCAGGTGATAATAAAAACTTGTCTGTGATATGGTGCCTCTTTGAGTGGCAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437645.5
ENST00000534097.5
CDS CCA 90 bp GGCCGCAGGTGCAGCAGCGTGGCGGCTCGCTCCCGCAGCCCTGCCTaGCGCGGTAGGAAGGCCACGCGCGGCCCGCACGGCTCGCAGGCG +
Preference number: 5 (lower is better)
Translates to: GRRCSSVAARSRSPA*RGRKATRGPHGSQA
Trigger: CGCCTGCGAGCCGTGCGGGCCGCGCGTGGCCTTCCTACCGCGCCAGGCAGGGCTGCGGGAGCGAGCCGCCACGCTGCTGCACCTGCGGCC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373048.9
ENST00000427468.6
CDS TCA 90 bp CCGCCGGGCCCTCGCGGCCGCAGCGCAGGCACAGCAGCGAGTAGGTaGCGTCCGAGCGGCCTCCCGAGTCGGCCGGCGGCAGCCAGCGCA +
Preference number: 5 (lower is better)
Translates to: PPGPRGRSAGTAASR*RPSGLPSRPAAASA
Trigger: TGCGCTGGCTGCCGCCGGCCGACTCGGGAGGCCGCTCGGACGTCACCTACTCGCTGCTGTGCCTGCGCTGCGGCCGCGAGGGCCCGGCGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373048.9
ENST00000427468.6
CDS CCA 90 bp CCACGCGCACGGTGTAGCGCGCGCCGGGCCGCAGGTGCAGCAGCGTaGCGGCTCGCTCCCGCAGCCCTGCCTGGCGCGGTAGGAAGGCCA +
Preference number: 5 (lower is better)
Translates to: PRARCSARRAAGAAA*RLAPAALPGAVGRP
Trigger: TGGCCTTCCTACCGCGCCAGGCAGGGCTGCGGGAGCGAGCCGCCACGCTGCTGCACCTGCGGCCCGGCGCGCGCTACACCGTGCGCGTGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373048.9
ENST00000427468.6
CDS GCA 90 bp AGCCAGCGCAGTCGCAGCACCAGCGGCGAGCGGCTCAGGCTGTACTaGAGGTCCCGCGGCGCCGACGGCGGCCGGGTGCAGGAAGCCGAG +
Preference number: 5 (lower is better)
Translates to: SQRSRSTSGERLRLY*RSRGADGGRVQEAE
Trigger: CTCGGCTTCCTGCACCCGGCCGCCGTCGGCGCCGCGGGACCTGCAGTACAGCCTGAGCCGCTCGCCGCTGGTGCTGCGACTGCGCTGGCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373048.9
ENST00000427468.6
CDS GCA 90 bp GCACGTTCCGGCCACTTCCACCAGTGTGGAGAAGGCGCTCTCGGCTaGGGTGGCTGGGAACGTGGCCAGGCCCCGCACGGTGGCGCGGCA +
Preference number: 5 (lower is better)
Translates to: ARSGHFHQCGEGALG*GGWERGQAPHGGAA
Trigger: TGCCGCGCCACCGTGCGGGGCCTGGCCACGTTCCCAGCCACCGCAGCCGAGAGCGCCTTCTCCACACTGGTGGAAGTGGCCGGAACGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319637.6
ENST00000373048.9
ENST00000427468.6
CDS GCA 90 bp GCTCCCGCCACGACAGGGACACGCTCTGGGGTTCCACTCGGTCCCTaGGGATCTCATCCTCCTCCCAGGGCGCCCCGGGCCCGGTGGAGA +
Preference number: 5 (lower is better)
Translates to: APATTGTRSGVPLGP*GSHPPPRAPRARWR
Trigger: TCTCCACCGGGCCCGGGGCGCCCTGGGAGGAGGATGAGATCCGCAGGGACCGAGTGGAACCCCAGAGCGTGTCCCTGTCGTGGCGGGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373048.9
ENST00000427468.6
ENST00000437645.5
ENST00000525749.1
ENST00000540011.2
CDS CCA 90 bp GGCAGAGGAAGAGGCGCAGCGGGTGTGGACCGGCGCAGGTCTCCATaGTCCGCAGACCGAGCTGTCAGTCCGGCGGCGGCTCAAGCCGCG +
Preference number: 5 (lower is better)
Translates to: GRGRGAAGVDRRRSP*SADRAVSPAAAQAA
Trigger: CGCGGCTTGAGCCGCCGCCGGACTGACAGCTCGGTCTGCGGACCATGGAGACCTGCGCCGGTCCACACCCGCTGCGCCTCTTCCTCTGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319637.6
ENST00000373048.9
CDS GCA 90 bp GCGGTCCCAGGCCGCCAGGGTCCCAAAAGCAGCGCGAGACAGAGCTaGATCCGGCAGAGGAAGAGGCGCAGCGGGTGTGGACCGGCGCAG +
Preference number: 5 (lower is better)
Translates to: AVPGRQGPKSSARQS*IRQRKRRSGCGPAQ
Trigger: CTGCGCCGGTCCACACCCGCTGCGCCTCTTCCTCTGCCGGATGCAGCTCTGTCTCGCGCTGCTTTTGGGACCCTGGCGGCCTGGGACCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319637.6
ENST00000373048.9
ENST00000427468.6
CDS CCA 90 bp TTCCGGCCACTTCCACCAGTGTGGAGAAGGCGCTCTCGGCTGCGGTaGCTGGGAACGTGGCCAGGCCCCGCACGGTGGCGCGGCACTGCT +
Preference number: 5 (lower is better)
Translates to: FRPLPPVWRRRSRLR*LGTWPGPARWRGTA
Trigger: AGCAGTGCCGCGCCACCGTGCGGGGCCTGGCCACGTTCCCAGCCACCGCAGCCGAGAGCGCCTTCTCCACACTGGTGGAAGTGGCCGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319637.6
ENST00000373048.9
ENST00000427468.6
CDS CCA 90 bp GGGGCTCCGGCAGGGATGGGCTCCCGCCACGACAGGGACACGCTCTaGGGTTCCACTCGGTCCCTGCGGATCTCATCCTCCTCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: GAPAGMGSRHDRDTL*GSTRSLRISSSSQG
Trigger: GCCCTGGGAGGAGGATGAGATCCGCAGGGACCGAGTGGAACCCCAGAGCGTGTCCCTGTCGTGGCGGGAGCCCATCCCTGCCGGAGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373048.9
ENST00000427468.6
ENST00000437645.5
ENST00000446149.6
ENST00000525749.1
ENST00000540011.2
CDS CCA 90 bp CCACCAGTGTGGAGAAGGCGCTCTCGGCTGCGGTGGCTGGGAACGTaGCCAGGCCCCGCACGGTGGCGCGGCACTGCTTGTAGTAGACGC +
Preference number: 5 (lower is better)
Translates to: PPVWRRRSRLRWLGT*PGPARWRGTACSRR
Trigger: GCGTCTACTACAAGCAGTGCCGCGCCACCGTGCGGGGCCTGGCCACGTTCCCAGCCACCGCAGCCGAGAGCGCCTTCTCCACACTGGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319637.6
ENST00000373048.9
ENST00000427468.6
CDS CCA 90 bp GGCCACTTCCACCAGTGTGGAGAAGGCGCTCTCGGCTGCGGTGGCTaGGAACGTGGCCAGGCCCCGCACGGTGGCGCGGCACTGCTTGTA +
Preference number: 5 (lower is better)
Translates to: GHFHQCGEGALGCGG*ERGQAPHGGAALLV
Trigger: TACAAGCAGTGCCGCGCCACCGTGCGGGGCCTGGCCACGTTCCCAGCCACCGCAGCCGAGAGCGCCTTCTCCACACTGGTGGAAGTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319637.6
ENST00000373048.9
ENST00000427468.6
CDS-3UTR CAA 90 bp TCAGCCCCTGCCAAGGCACAGGGAGCTGAGGTGGATGCACCTCTGGCCCAGCCCGCGATCGTGTCGATTTaGCGGGGCCGGCTGCCGCCT +
Preference number: 5 (lower is better)
Translates to: SAPAKAQGAEVDAPLAQPAIVSI*RGRLPP
Trigger: AGGCGGCAGCCGGCCCCGCAAAATCGACACGATCGC...GGGCTGGGCCAGAGGTGCATCCACCTCAGCTCCCTGTGCCTTGGCAGGGGCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS CCA 90 bp CGGCCCCCAGCCAACTGGATACCTTCGCAGAAGTCACCACGCTCCTaGAATCCCGCGCTGCAGCTGCAGCGGCCCACAGGCACCAGCCAC +
Preference number: 5 (lower is better)
Translates to: RPPANWIPSQKSPRS*NPALQLQRPTGTSH
Trigger: GTGGCTGGTGCCTGTGGGCCGCTGCAGCTGCAGCGCGGGATTCCAGGAGCGTGGTGACTTCTGCGAAGGTATCCAGTTGGCTGGGGGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS CCA 90 bp GGTCGGTGGGTGAGCGCGCATAGCTGTCCTGGCACACGCAGAAGGTaGAGGCGTTTTCCAGGGCCCGGCTGTGCTCTGGGCACGGTGAGC +
Preference number: 5 (lower is better)
Translates to: GRWVSAHSCPGTRRR*RRFPGPGCALGTVS
Trigger: GCTCACCGTGCCCAGAGCACAGCCGGGCCCTGGAAAACGCCTCCACCTTCTGCGTGTGCCAGGACAGCTATGCGCGCTCACCCACCGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373048.9
ENST00000427468.6
CDS TCA 90 bp TCATCACGGAGCCCAGGACGAGGAGGGCCGAGATGGTCACTACGGTaGCGACAATGGCGGGGCTCTGGTCCCTGGACCCTGAGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: SSRSPGRGGPRWSLR*RQWRGSGPWTLRQP
Trigger: AGGCTGCCTCAGGGTCCAGGGACCAGAGCCCCGCCATTGTCGTCACCGTAGTGACCATCTCGGCCCTCCTCGTCCTGGGCTCCGTGATGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373048.9
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000446149.6
ENST00000534097.5
ENST00000540011.2
CDS-3UTR CAA 90 bp TCAGCCCCTGCCAAGGCACAGGGAGCTGAGGTGGATGCACCTCTGGCCCAGCCCCACCGGAGTCCTGCCTaGGAAGAATGGGGTCCACTC +
Preference number: 5 (lower is better)
Translates to: SAPAKAQGAEVDAPLAQPHRSPA*EEWGPL
Trigger: GAGTGGACCCCATTCTTCCAAGGCAGGACTCCGGTG...GGGCTGGGCCAGAGGTGCATCCACCTCAGCTCCCTGTGCCTTGGCAGGGGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CAA 90 bp CAGCCAAAGAGATGCCTAGGCTCACCAGGTCCTGGGCAGTCATCTCGGCCACGGCAGCAACCCCATCAGTaGCCCAGCCACCAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: QPKRCLGSPGPGQSSRPRQQPHQ*PSHQLP
Trigger: GGGCAGCTGGTGGCTGGGCAACTGATGGGGTTGCTG...CCGTGGCCGAGATGACTGCCCAGGACCTGGTGAGCCTAGGCATCTCTTTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp GGCCACGGCCTCCAGGCTCCCATAGCCAGCAGCCGCGAAGCTGTCCTTGTAGCGCCGAAGCCAGAGATCTaGCAGACAAGGTCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GHGLQAPIASSREAVLVAPKPEI*QTRSLL
Trigger: CAGCAGCGACCTTGTCTGCAAGATCTCTGGCTTCGG...CGCTACAAGGACAGCTTCGCGGCTGCTGGCTATGGGAGCCTGGAGGCCGTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp ACCCTACGAAAGCTCTGGCATACTGGGCCCCACCATTCCCGGGGGCCCTTGTGGCCTCCCACCCATTACTaGGCAGTGCAGTCCAGCCCA +
Preference number: 5 (lower is better)
Translates to: TLRKLWHTGPHHSRGPLWPPTHY*AVQSSP
Trigger: TGGGCTGGACTGCACTGCCAAGTAATGGGTGGGAGG...CCACAAGGGCCCCCGGGAATGGTGGGGCCCAGTATGCCAGAGCTTTCGTAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS GCA 90 bp CTGCTGCAGTCACGGAGTGTGAACTGCAGTTCCACGAAGATGCGCTaGCCGCGGCCACGGCTTATCCAGCCAGTCTGCAGCCAGTTGTCC +
Preference number: 5 (lower is better)
Translates to: LLQSRSVNCSSTKMR*PRPRLIQPVCSQLS
Trigger: GGACAACTGGCTGCAGACTGGCTGGATAAGCCGTGGCCGCGGGCAGCGCATCTTCGTGGAACTGCAGTTCACACTCCGTGACTGCAGCAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319637.6
ENST00000373048.9
ENST00000427468.6
CDS-3UTR CAA 90 bp GGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAACGTTGAAGGTCTCCTaGCAGGTACCCGCGGCGCCA +
Preference number: 5 (lower is better)
Translates to: GHPCPRGRGQKPFHTSYTTLKVS*QVPAAP
Trigger: TGGCGCCGCGGGTACCTGCAAGGAGACCTTCAACGT...TGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR CAA 90 bp ACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGCGATCGTGTCGATTTaGCGGGGCCGGCTGCCGCCT +
Preference number: 5 (lower is better)
Translates to: TPLSSRKGAEALPHQLYNAIVSI*RGRLPP
Trigger: AGGCGGCAGCCGGCCCCGCAAAATCGACACGATCGC...ATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR CAA 90 bp GACGGTGACTGTGGGCGCCCCTGTCTTCACCATGGAGTAAGTCTGCTCACTCTGTCGTACTCCGTGTCATaGGCCCCAGGGGCTCCGGCA +
Preference number: 5 (lower is better)
Translates to: DGDCGRPCLHHGVSLLTLSYSVS*APGAPA
Trigger: TGCCGGAGCCCCTGGGGCCAATGACACGGAGTACGA...CAGAGTGAGCAGACTTACTCCATGGTGAAGACAGGGGCGCCCACAGTCACCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525749.1
CDS-3UTR CAA 90 bp ACTCGTGCCTGCAGGGCGCTGATCCCGCTGAGGAGGGCCTCTCGATGTTCAGCCTTCGCATCCAGTTCCTaGGCGAACAGATGCACAGCC +
Preference number: 5 (lower is better)
Translates to: TRACRALIPLRRASRCSAFASSS*ANRCTA
Trigger: GGCTGTGCATCTGTTCGCCAAGGAACTGGATGCGAA...GGCTGAACATCGAGAGGCCCTCCTCAGCGGGATCAGCGCCCTGCAGGCACGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp GGCCACGGCCTCCAGGCTCCCATAGCCAGCAGCCGCGAAGCTGTCCTTGTAGCGAGCCTTGATCACGTCTaGGCCAGACATGTCCCAGTA +
Preference number: 5 (lower is better)
Translates to: GHGLQAPIASSREAVLVASLDHV*ARHVPV
Trigger: TACTGGGACATGTCTGGCCAAGACGTGATCAAGGCT...CGCTACAAGGACAGCTTCGCGGCTGCTGGCTATGGGAGCCTGGAGGCCGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp ACCCTACGAAAGCTCTGGCATACTGGGCCCCACCATTCCCGGGGGCCCTTGTGGGGTGGTAGCAACATCTaGGTCTCCCCAGTACCCCCA +
Preference number: 5 (lower is better)
Translates to: TLRKLWHTGPHHSRGPLWGGSNI*VSPVPP
Trigger: TGGGGGTACTGGGGAGACCAAGATGTTGCTACCACC...CCACAAGGGCCCCCGGGAATGGTGGGGCCCAGTATGCCAGAGCTTTCGTAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CAA 90 bp CTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTGCAGGGTAATGGGGGCTaGCAGGCCACCTCTGTCCAG +
Preference number: 5 (lower is better)
Translates to: LDTEVLPTQPGALLQKQLQGNGG*QATSVQ
Trigger: CTGGACAGAGGTGGCCTGCAAGCCCCCATTACCCTG...CAGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CAA 90 bp AGGCAGCAACCCCATCAGTTGCCCAGCCACCAGCTGCCCCTCGTGCCGCCTGAGCGCCAGCTAAAGGTATaGGCGTATCCGGAACAGTCT +
Preference number: 5 (lower is better)
Translates to: RQQPHQLPSHQLPLVPPERQLKV*AYPEQS
Trigger: AGACTGTTCCGGATACGCCAATACCTTTAGCTGGCG...CTCAGGCGGCACGAGGGGCAGCTGGTGGCTGGGCAACTGATGGGGTTGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000432874.7
CDS CCA 90 bp TCCTCCCACCCATTACTTGGCAGTGCAGTCCAGCCCAGCTCGGCCTaGGAGGCTTTGGAATCCAGGAGGATAACTTCCTCGGCGGTCCCA +
Preference number: 5 (lower is better)
Translates to: SSHPLLGSAVQPSSA*EALESRRITSSAVP
Trigger: TGGGACCGCCGAGGAAGTTATCCTCCTGGATTCCAAAGCCTCCCAGGCCGAGCTGGGCTGGACTGCACTGCCAAGTAATGGGTGGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319637.6
ENST00000373048.9
ENST00000427468.6
CDS-3UTR CAA 90 bp GCCCAAGGCAGGGGGACACAGAAACCAGATCCTGAGTCTAGGGCTCTTGGGTATTCGTACTCCGTGTCATaGGCCCCAGGGGCTCCGGCA +
Preference number: 5 (lower is better)
Translates to: AQGRGTQKPDPESRALGYSYSVS*APGAPA
Trigger: TGCCGGAGCCCCTGGGGCCAATGACACGGAGTACGA...ATACCCAAGAGCCCTAGACTCAGGATCTGGTTTCTGTGTCCCCCTGCCTTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CAA 90 bp CTGCCATCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTAGCTTGCCACGGTCCTaGGGCAGGGCTGGGGGACTG +
Preference number: 5 (lower is better)
Translates to: LPSCLPKTPPTPRKEPSLSLPRS*GRAGGL
Trigger: CAGTCCCCCAGCCCTGCCCAAGGACCGTGGCAAGCT...AAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGATGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CAA 90 bp TCTGGGCTCTTTCTCATGCTAGCCTCTCTGCATGGACTCCTTTTGTCCGAGGCCCTGCTGGAGCGCAGCTaGCCACGGTCCTTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: SGLFLMLASLHGLLLSEALLERS*PRSLGR
Trigger: CCTGCCCAAGGACCGTGGCAAGCTGCGCTCCAGCAG...GGCCTCGGACAAAAGGAGTCCATGCAGAGAGGCTAGCATGAGAAAGAGCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CAA 90 bp AGGAGGGCCTCTCGATGTTCAGCCAAAGAGATGCCTAGGCTCACCAGGTCCTGGCTCCCCAAACCGCCCTaGAGGACCAGGAGAGGGTCA +
Preference number: 5 (lower is better)
Translates to: RRASRCSAKEMPRLTRSWLPKPP*RTRRGS
Trigger: TGACCCTCTCCTGGTCCTCAAGGGCGGTTTGGGGAG...CCAGGACCTGGTGAGCCTAGGCATCTCTTTGGCTGAACATCGAGAGGCCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432874.7
CDS TCA 90 bp AGCACAGCTCCCCAAACCGCCCTCCTCCAAGGCTCCTCTCCAGCGTaGCGCTTTTCGCATCCAGTTCCTTGGCGAACAGATGCACAGCCT +
Preference number: 5 (lower is better)
Translates to: STAPQTALLQGSSPA*RFSHPVPWRTDAQP
Trigger: AGGCTGTGCATCTGTTCGCCAAGGAACTGGATGCGAAAAGCGTCACGCTGGAGAGGAGCCTTGGAGGAGGGCGGTTTGGGGAGCTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373048.9
ENST00000427468.6
ENST00000446149.6
ENST00000534097.5
CDS CCA 90 bp CTCCCAGGGCGCTTCAGAGATAATCTAGCTCAGCTCCCACTGGCCTaGTCCTCCGGCAGCTTCCCCAGCAGTAGCCACAGTCTTTGTCAC +
Preference number: 5 (lower is better)
Translates to: LPGRFRDNLAQLPLA*SSGSFPSSSHSLCH
Trigger: GTGACAAAGACTGTGGCTACTGCTGGGGAAGCTGCCGGAGGACCAGGCCAGTGGGAGCTGAGCTAGATTATCTCTGAAGCGCCCTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446149.6
CDS-3UTR CAA 90 bp ACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGTAGCCGGCTTCAGGTaGGTGACGGTGACTGTGGGC +
Preference number: 5 (lower is better)
Translates to: TPLSSRKGAEALPHQLYNVAGFR*VTVTVG
Trigger: GCCCACAGTCACCGTCACCAACCTGAAGCCGGCTAC...ATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000427468.6
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp TGGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACGGGTCCTGCACCATCTaGCTCAGGATGCTGTGGATC +
Preference number: 5 (lower is better)
Translates to: WTPLSSRKGAEALPHQLYGSCTI*LRMLWI
Trigger: GATCCACAGCATCCTGAGCAAGATGGTGCAGGACCC...GTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR CAA 90 bp CCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCCCTCCCACCCATTACTaGGCAGTGCAGTCCAGCCCA +
Preference number: 5 (lower is better)
Translates to: PCPRGRGQKPFHTSYTMIPPTHY*AVQSSP
Trigger: TGGGCTGGACTGCACTGCCAAGTAATGGGTGGGAGG...GATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR CAA 90 bp GGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCATCGTACTCCGTGTCATaGGCCCCAGGGGCTCCGGCA +
Preference number: 5 (lower is better)
Translates to: GRGQKPFHTSYTMIKQLPSYSVS*APGAPA
Trigger: TGCCGGAGCCCCTGGGGCCAATGACACGGAGTACGA...TGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000427468.6
ENST00000437645.5
CDS-3UTR CAA 90 bp TGGACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACTTCGCATCCAGTTCCTaGGCGAACAGATGCACAGCC +
Preference number: 5 (lower is better)
Translates to: WTPLSSRKGAEALPHQLYFASSS*ANRCTA
Trigger: GGCTGTGCATCTGTTCGCCAAGGAACTGGATGCGAA...GTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp AGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCCAGCAACCCCATCAGTaGCCCAGCCACCAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: RGQKPFHTSYTMIKQLPLQQPHQ*PSHQLP
Trigger: GGGCAGCTGGTGGCTGGGCAACTGATGGGGTTGCTG...GAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp CCTCCAGAGCTGTGGGACAGTAAATCCCTCTATGCAGAGAGATCTCAGACGCAGCAGCAACCCCATCAGTaGCCCAGCCACCAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: PPELWDSKSLYAERSQTQQQPHQ*PSHQLP
Trigger: GGGCAGCTGGTGGCTGGGCAACTGATGGGGTTGCTG...CTGCGTCTGAGATCTCTCTGCATAGAGGGATTTACTGTCCCACAGCTCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp CACTCCTCAGTGGAGGGGAGATCTACCCTGGACACCGAAGTCCTGCCAACACAGCCGAAGCCAGAGATCTaGCAGACAAGGTCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: HSSVEGRSTLDTEVLPTQPKPEI*QTRSLL
Trigger: CAGCAGCGACCTTGTCTGCAAGATCTCTGGCTTCGG...CTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGATCTCCCCTCCACTGAGGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CAA 90 bp TGTTCAGCCAAAGAGATGCCTAGGCTCACCAGGTCCTGGGCAGTCATCTCGGCCCCATCCTCCACAGCCTaGATCACGTCTTGGCCAGAC +
Preference number: 5 (lower is better)
Translates to: CSAKEMPRLTRSWAVISAPSSTA*ITSWPD
Trigger: GTCTGGCCAAGACGTGATCAAGGCTGTGGAGGATGG...GGCCGAGATGACTGCCCAGGACCTGGTGAGCCTAGGCATCTCTTTGGCTGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp CTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTGAGCCTTACCCCTGGATaGGGTTCTGACCTCAGCTCT +
Preference number: 5 (lower is better)
Translates to: LDTEVLPTQPGALLQKQLSLTPG*GSDLSS
Trigger: AGAGCTGAGGTCAGAACCCAATCCAGGGGTAAGGCT...CAGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS TCA 90 bp CTTCCAGACACGAGCAGAGACCTCCTCCAAGGCTCCTCTCCAGCGTaGCGCTTTTCGCATCCAGTTCCTTGGCGAACAGATGCACAGCCT +
Preference number: 5 (lower is better)
Translates to: LPDTSRDLLQGSSPA*RFSHPVPWRTDAQP
Trigger: AGGCTGTGCATCTGTTCGCCAAGGAACTGGATGCGAAAAGCGTCACGCTGGAGAGGAGCCTTGGAGGAGGTCTCTGCTCGTGTCTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432874.7
CDS-3UTR CAA 90 bp GCCCAAGGCAGGGGGACACAGAAACCAGATCCTGAGTCTAGGGCTCTTGGGTATAGCCAGTTGTCCTGGTaGGGCTCCAGCACATTGCAC +
Preference number: 5 (lower is better)
Translates to: AQGRGTQKPDPESRALGYSQLSW*GSSTLH
Trigger: GTGCAATGTGCTGGAGCCCAACCAGGACAACTGGCT...ATACCCAAGAGCCCTAGACTCAGGATCTGGTTTCTGTGTCCCCCTGCCTTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CAA 90 bp TTCCAGCCTCCAGAGCTGTGGGACAGTAAATCCCTCTATGCAGAGAGATCTCAGTCGTACTCCGTGTCATaGGCCCCAGGGGCTCCGGCA +
Preference number: 5 (lower is better)
Translates to: FQPPELWDSKSLYAERSQSYSVS*APGAPA
Trigger: TGCCGGAGCCCCTGGGGCCAATGACACGGAGTACGA...CTGAGATCTCTCTGCATAGAGGGATTTACTGTCCCACAGCTCTGGAGGCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437645.5
CDS-3UTR CAA 90 bp GGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCAGTAGCCGGCTTCAGGTaGGTGACGGTGACTGTGGGC +
Preference number: 5 (lower is better)
Translates to: GRGQKPFHTSYTMIKQLPVAGFR*VTVTVG
Trigger: GCCCACAGTCACCGTCACCAACCTGAAGCCGGCTAC...TGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427468.6
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp CTGAGGAGGGCCTCTCGATGTTCAGCCAAAGAGATGCCTAGGCTCACCAGGTCCTTCGCATCCAGTTCCTaGGCGAACAGATGCACAGCC +
Preference number: 5 (lower is better)
Translates to: LRRASRCSAKEMPRLTRSFASSS*ANRCTA
Trigger: GGCTGTGCATCTGTTCGCCAAGGAACTGGATGCGAA...GGACCTGGTGAGCCTAGGCATCTCTTTGGCTGAACATCGAGAGGCCCTCCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp CAGAGAATGACTGATGTAGCTGGAGATGAGGACGAGGCTCCATCCACCCAAGAACAGCAACCCCATCAGTaGCCCAGCCACCAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: QRMTDVAGDEDEAPSTQEQQPHQ*PSHQLP
Trigger: GGGCAGCTGGTGGCTGGGCAACTGATGGGGTTGCTG...TTCTTGGGTGGATGGAGCCTCGTCCTCATCTCCAGCTACATCAGTCATTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CAA 90 bp GCCCAAGGCAGGGGGACACAGAAACCAGATCCTGAGTCTAGGGCTCTTGGGTATCCATCCTCCACAGCCTaGATCACGTCTTGGCCAGAC +
Preference number: 5 (lower is better)
Translates to: AQGRGTQKPDPESRALGYPSSTA*ITSWPD
Trigger: GTCTGGCCAAGACGTGATCAAGGCTGTGGAGGATGG...ATACCCAAGAGCCCTAGACTCAGGATCTGGTTTCTGTGTCCCCCTGCCTTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CAA 90 bp CCTGGACACCGAAGTCCTGCCAACACAGCCAGGGGCCCTTCTGCAGAAACAGCTGTTAGACCAGCCTGTTaGAGAGAGAGGACCCATCTC +
Preference number: 5 (lower is better)
Translates to: PGHRSPANTARGPSAETAVRPAC*RERTHL
Trigger: GAGATGGGTCCTCTCTCTCAAACAGGCTGGTCTAAC...AGCTGTTTCTGCAGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CAA 90 bp CTGCCATCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTCATTCCCGGGGGCCCTaGTGGATAAGGAACTCCACG +
Preference number: 5 (lower is better)
Translates to: LPSCLPKTPPTPRKEPSLHSRGP*WIRNST
Trigger: CGTGGAGTTCCTTATCCACAAGGGCCCCCGGGAATG...AAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGATGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CAA 90 bp AAGAGAGAGAATGAGAGGTCTGTTCCTAATGCCCCCACTAGCCTGAGAACCCAGACGTTGAAGGTCTCCTaGCAGGTACCCGCGGCGCCA +
Preference number: 5 (lower is better)
Translates to: KRENERSVPNAPTSLRTQTLKVS*QVPAAP
Trigger: TGGCGCCGCGGGTACCTGCAAGGAGACCTTCAACGT...CTGGGTTCTCAGGCTAGTGGGGGCATTAGGAACAGACCTCTCATTCTCTCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR CAA 90 bp CAGAGAATGACTGATGTAGCTGGAGATGAGGACGAGGCTCCATCCACCCAAGAAACGTTGAAGGTCTCCTaGCAGGTACCCGCGGCGCCA +
Preference number: 5 (lower is better)
Translates to: QRMTDVAGDEDEAPSTQETLKVS*QVPAAP
Trigger: TGGCGCCGCGGGTACCTGCAAGGAGACCTTCAACGT...TTCTTGGGTGGATGGAGCCTCGTCCTCATCTCCAGCTACATCAGTCATTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CAA 90 bp ACACACAGCCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTGTGTTCAGCTTCATCTaGCGCTCACCCAGGTCGCCC +
Preference number: 5 (lower is better)
Translates to: THSQAEQTSVTGGLNKLSVFSFI*RSPRSP
Trigger: GGGCGACCTGGGTGAGCGCAAGATGAAGCTGAACAC...ACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGGCTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CAA 90 bp CAGAGAATGACTGATGTAGCTGGAGATGAGGACGAGGCTCCATCCACCCAAGAAGTAGCCGGCTTCAGGTaGGTGACGGTGACTGTGGGC +
Preference number: 5 (lower is better)
Translates to: QRMTDVAGDEDEAPSTQEVAGFR*VTVTVG
Trigger: GCCCACAGTCACCGTCACCAACCTGAAGCCGGCTAC...TTCTTGGGTGGATGGAGCCTCGTCCTCATCTCCAGCTACATCAGTCATTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CAA 90 bp TCACCATGGAGTAAGTCTGCTCACTCTGACCGGGGAAAAGAGCAGATTGGGATGGTAGCCGGCTTCAGGTaGGTGACGGTGACTGTGGGC +
Preference number: 5 (lower is better)
Translates to: SPWSKSAHSDRGKEQIGMVAGFR*VTVTVG
Trigger: GCCCACAGTCACCGTCACCAACCTGAAGCCGGCTAC...CATCCCAATCTGCTCTTTTCCCCGGTCAGAGTGAGCAGACTTACTCCATGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525749.1
CDS-3UTR CAA 90 bp CACCAGGTCCTGGGCAGTCATCTCGGCCACGGCCTCCAGGCTCCCATAGCCAGCGCGGCATCTCATTTATaGAAGACGTACATGTTAACA +
Preference number: 5 (lower is better)
Translates to: HQVLGSHLGHGLQAPIASAASHL*KTYMLT
Trigger: TGTTAACATGTACGTCTTCAATAAATGAGATGCCGC...GCTGGCTATGGGAGCCTGGAGGCCGTGGCCGAGATGACTGCCCAGGACCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp GGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCAAAGTAGCCGGCTTCAGGTaGGTGACGGTGACTGTGGGC +
Preference number: 5 (lower is better)
Translates to: GQKPFHTSYTMIKQLPLKVAGFR*VTVTVG
Trigger: GCCCACAGTCACCGTCACCAACCTGAAGCCGGCTAC...TTTGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427468.6
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp CTGAGGAGGGCCTCTCGATGTTCAGCCAAAGAGATGCCTAGGCTCACCAGGTCCCGACGTGTTGGGACTTaGAAGTGGAAATACAGCTCC +
Preference number: 5 (lower is better)
Translates to: LRRASRCSAKEMPRLTRSRRVGT*KWKYSS
Trigger: GGAGCTGTATTTCCACTTCAAAGTCCCAACACGTCG...GGACCTGGTGAGCCTAGGCATCTCTTTGGCTGAACATCGAGAGGCCCTCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp TCTTGCCTGCCGAAAACTCCACCCACCCCAAGGAAAGAACCTTCCCTTTCCCACTTCGCATCCAGTTCCTaGGCGAACAGATGCACAGCC +
Preference number: 5 (lower is better)
Translates to: SCLPKTPPTPRKEPSLSHFASSS*ANRCTA
Trigger: GGCTGTGCATCTGTTCGCCAAGGAACTGGATGCGAA...GTGGGAAAGGGAAGGTTCTTTCCTTGGGGTGGGTGGAGTTTTCGGCAGGCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CAA 90 bp GGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACCGAAGCCAGAGATCTaGCAGACAAGGTCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GRGQKPFHTSYTMIKQLPPKPEI*QTRSLL
Trigger: CAGCAGCGACCTTGTCTGCAAGATCTCTGGCTTCGG...TGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp AGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCCCATCCTCCACAGCCTaGATCACGTCTTGGCCAGAC +
Preference number: 5 (lower is better)
Translates to: RGQKPFHTSYTMIKQLPLPSSTA*ITSWPD
Trigger: GTCTGGCCAAGACGTGATCAAGGCTGTGGAGGATGG...GAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp AATCCCTCTATGCAGAGAGATCTCAGACGCAGATTCTGGACACCCCTGTCCTCGCCATCCTCCACAGCCTaGATCACGTCTTGGCCAGAC +
Preference number: 5 (lower is better)
Translates to: NPSMQRDLRRRFWTPLSSPSSTA*ITSWPD
Trigger: GTCTGGCCAAGACGTGATCAAGGCTGTGGAGGATGG...CGAGGACAGGGGTGTCCAGAATCTGCGTCTGAGATCTCTCTGCATAGAGGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp ACACACAGCCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTGGGTCCTGCACCATCTaGCTCAGGATGCTGTGGATC +
Preference number: 5 (lower is better)
Translates to: THSQAEQTSVTGGLNKLSGSCTI*LRMLWI
Trigger: GATCCACAGCATCCTGAGCAAGATGGTGCAGGACCC...ACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGGCTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CAA 90 bp CACTCGTGCCTGCAGGGCGCTGATCCCGCTGAGGAGGGCCTCTCGATGTTCAGCTGTGATGTTTCTTTCTaGGTAGGACATCTTACACTC +
Preference number: 5 (lower is better)
Translates to: HSCLQGADPAEEGLSMFSCDVSF*VGHLTL
Trigger: GAGTGTAAGATGTCCTACCAAGAAAGAAACATCACA...GCTGAACATCGAGAGGCCCTCCTCAGCGGGATCAGCGCCCTGCAGGCACGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS CCA 90 bp CAACCTTGCGCACATCTTGATCTTGGCTTCCAGCCTCCAGAGCTGTaGGACAGTAAATCCCTGTCGGCAAACCCATGGGTGCTGTGTTAC +
Preference number: 5 (lower is better)
Translates to: QPCAHLDLGFQPPEL*DSKSLSANPWVLCY
Trigger: GTAACACAGCACCCATGGGTTTGCCGACAGGGATTTACTGTCCCACAGCTCTGGAGGCTGGAAGCCAAGATCAAGATGTGCGCAAGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444950.1
CDS-3UTR CAA 90 bp AAGAGAGAGAATGAGAGGTCTGTTCCTAATGCCCCCACTAGCCTGAGAACCCAGAGCCAGTTGTCCTGGTaGGGCTCCAGCACATTGCAC +
Preference number: 5 (lower is better)
Translates to: KRENERSVPNAPTSLRTQSQLSW*GSSTLH
Trigger: GTGCAATGTGCTGGAGCCCAACCAGGACAACTGGCT...CTGGGTTCTCAGGCTAGTGGGGGCATTAGGAACAGACCTCTCATTCTCTCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR CAA 90 bp GGGAGCACAGTGATTGTAGTTCAGAGAGTGGGATGTGATCTTCGTAATCATCTAGCGATCGTGTCGATTTaGCGGGGCCGGCTGCCGCCT +
Preference number: 5 (lower is better)
Translates to: GSTVIVVQRVGCDLRNHLAIVSI*RGRLPP
Trigger: AGGCGGCAGCCGGCCCCGCAAAATCGACACGATCGC...TAGATGATTACGAAGATCACATCCCACTCTCTGAACTACAATCACTGTGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR CAA 90 bp ACACCCCTGTCCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATCGACGTGTTGGGACTTaGAAGTGGAAATACAGCTCC +
Preference number: 5 (lower is better)
Translates to: TPLSSRKGAEALPHQLYNRRVGT*KWKYSS
Trigger: GGAGCTGTATTTCCACTTCAAAGTCCCAACACGTCG...ATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGGACAGGGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp GCTCCCCTCACAGCTCTCAGCAGGAAACAACCTTGCGCACATCTTGATCTTGGCAGCCTTGATCACGTCTaGGCCAGACATGTCCCAGTA +
Preference number: 5 (lower is better)
Translates to: APLTALSRKQPCAHLDLGSLDHV*ARHVPV
Trigger: TACTGGGACATGTCTGGCCAAGACGTGATCAAGGCT...GCCAAGATCAAGATGTGCGCAAGGTTGTTTCCTGCTGAGAGCTGTGAGGGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp CACATCTTGATCTTGGCTTCCAGCCTCCAGAGCTGTGGGACAGTAAATCCCTCTCCATCCTCCACAGCCTaGATCACGTCTTGGCCAGAC +
Preference number: 5 (lower is better)
Translates to: HILILASSLQSCGTVNPSPSSTA*ITSWPD
Trigger: GTCTGGCCAAGACGTGATCAAGGCTGTGGAGGATGG...AGAGGGATTTACTGTCCCACAGCTCTGGAGGCTGGAAGCCAAGATCAAGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp ACACACAGCCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTCTGCATGGACTCCTTTaGTCCGAGGCCTGCCATCTT +
Preference number: 5 (lower is better)
Translates to: THSQAEQTSVTGGLNKLSLHGLL*SEACHL
Trigger: AAGATGGCAGGCCTCGGACAAAAGGAGTCCATGCAG...ACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGGCTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CAA 90 bp GCCTGCAGGGCGCTGATCCCGCTGAGGAGGGCCTCTCGATGTTCAGCCAAAGAGTGTGATGTTTCTTTCTaGGTAGGACATCTTACACTC +
Preference number: 5 (lower is better)
Translates to: ACRALIPLRRASRCSAKECDVSF*VGHLTL
Trigger: GAGTGTAAGATGTCCTACCAAGAAAGAAACATCACA...CTCTTTGGCTGAACATCGAGAGGCCCTCCTCAGCGGGATCAGCGCCCTGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp CAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCCACTCAAAGAGGTGTTCAGCTTCATCTaGCGCTCACCCAGGTCGCCC +
Preference number: 5 (lower is better)
Translates to: QKPFHTSYTMIKQLPLKEVFSFI*RSPRSP
Trigger: GGGCGACCTGGGTGAGCGCAAGATGAAGCTGAACAC...CTCTTTGAGTGGCAGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427468.6
CDS-3UTR CAA 90 bp TCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTTTCGCATCCAGTTCCTaGGCGAACAGATGCACAGCC +
Preference number: 5 (lower is better)
Translates to: SRKGAEALPHQLYNDQATFASSS*ANRCTA
Trigger: GGCTGTGCATCTGTTCGCCAAGGAACTGGATGCGAA...AGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp ACACACAGCCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTAGCCTTGATCACGTCTaGGCCAGACATGTCCCAGTA +
Preference number: 5 (lower is better)
Translates to: THSQAEQTSVTGGLNKLSSLDHV*ARHVPV
Trigger: TACTGGGACATGTCTGGCCAAGACGTGATCAAGGCT...ACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGGCTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CAA 90 bp CCTCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAAAGCCTTGATCACGTCTaGGCCAGACATGTCCCAGTA +
Preference number: 5 (lower is better)
Translates to: PRGRGQKPFHTSYTMIKQSLDHV*ARHVPV
Trigger: TACTGGGACATGTCTGGCCAAGACGTGATCAAGGCT...TTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp ACACACAGCCAAGCAGAGCAGACAAGTGTCACGGGCGGCCTAAACAAACTCAGTCGACGTGTTGGGACTTaGAAGTGGAAATACAGCTCC +
Preference number: 5 (lower is better)
Translates to: THSQAEQTSVTGGLNKLSRRVGT*KWKYSS
Trigger: GGAGCTGTATTTCCACTTCAAAGTCCCAACACGTCG...ACTGAGTTTGTTTAGGCCGCCCGTGACACTTGTCTGCTCTGCTTGGCTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CAA 90 bp CAGAGAATGACTGATGTAGCTGGAGATGAGGACGAGGCTCCATCCACCCAAGAAGTCCTCCCTAGGGATTaGAACCTCTTTTCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: QRMTDVAGDEDEAPSTQEVLPRD*NLFSGA
Trigger: TGCCCCTGAAAAGAGGTTCAAATCCCTAGGGAGGAC...TTCTTGGGTGGATGGAGCCTCGTCCTCATCTCCAGCTACATCAGTCATTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CAA 90 bp GGGAGCACAGTGATTGTAGTTCAGAGAGTGGGATGTGATCTTCGTAATCATCTACCTCCCACCCATTACTaGGCAGTGCAGTCCAGCCCA +
Preference number: 5 (lower is better)
Translates to: GSTVIVVQRVGCDLRNHLPPTHY*AVQSSP
Trigger: TGGGCTGGACTGCACTGCCAAGTAATGGGTGGGAGG...TAGATGATTACGAAGATCACATCCCACTCTCTGAACTACAATCACTGTGCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR CAA 90 bp AATGCCTCCTTAGCCAGTCAATTTCATCTAGTAAGTTCACTCATTGGCCCTGACGTGTTCAGCTTCATCTaGCGCTCACCCAGGTCGCCC +
Preference number: 5 (lower is better)
Translates to: NASLASQFHLVSSLIGPDVFSFI*RSPRSP
Trigger: GGGCGACCTGGGTGAGCGCAAGATGAAGCTGAACAC...GTCAGGGCCAATGAGTGAACTTACTAGATGAAATTGACTGGCTAAGGAGGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR CAA 90 bp AAGAGAGAGAATGAGAGGTCTGTTCCTAATGCCCCCACTAGCCTGAGAACCCAGCACACTCTCTCTCAATaGCCACCTACGCTCTACACT +
Preference number: 5 (lower is better)
Translates to: KRENERSVPNAPTSLRTQHTLSQ*PPTLYT
Trigger: AGTGTAGAGCGTAGGTGGCAATTGAGAGAGAGTGTG...CTGGGTTCTCAGGCTAGTGGGGGCATTAGGAACAGACCTCTCATTCTCTCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR CAA 90 bp AAATCCCTCTATGCAGAGAGATCTCAGACGCAGATTCTGGACACCCCTGTCCTCCGACGTGTTGGGACTTaGAAGTGGAAATACAGCTCC +
Preference number: 5 (lower is better)
Translates to: KSLYAERSQTQILDTPVLRRVGT*KWKYSS
Trigger: GGAGCTGTATTTCCACTTCAAAGTCCCAACACGTCG...GAGGACAGGGGTGTCCAGAATCTGCGTCTGAGATCTCTCTGCATAGAGGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp AACTGCCACTCAAAGAGGCACCATATCACAGACAAGTTTTTATTATCACCTGCACAGCAACCCCATCAGTaGCCCAGCCACCAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: NCHSKRHHITDKFLLSPAQQPHQ*PSHQLP
Trigger: GGGCAGCTGGTGGCTGGGCAACTGATGGGGTTGCTG...TGCAGGTGATAATAAAAACTTGTCTGTGATATGGTGCCTCTTTGAGTGGCAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp CAGAGAATGACTGATGTAGCTGGAGATGAGGACGAGGCTCCATCCACCCAAGAACCCTGGAATTACTTCTaGGTACCTGAGCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: QRMTDVAGDEDEAPSTQEPWNYF*VPELFS
Trigger: GGAGAAGAGCTCAGGTACCAAGAAGTAATTCCAGGG...TTCTTGGGTGGATGGAGCCTCGTCCTCATCTCCAGCTACATCAGTCATTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373048.9
CDS-3UTR CAA 90 bp CATCTTGATCTTGGCTTCCAGCCTCCAGAGCTGTGGGACAGTAAATCCCTCTATCGACGTGTTGGGACTTaGAAGTGGAAATACAGCTCC +
Preference number: 5 (lower is better)
Translates to: HLDLGFQPPELWDSKSLYRRVGT*KWKYSS
Trigger: GGAGCTGTATTTCCACTTCAAAGTCCCAACACGTCG...ATAGAGGGATTTACTGTCCCACAGCTCTGGAGGCTGGAAGCCAAGATCAAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp TCTGAAACTGGGATGCATCTTTCAGTTGGATGGCACAACATAGTTGGCTGTGATCCGAAGCCAGAGATCTaGCAGACAAGGTCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SETGMHLSVGWHNIVGCDPKPEI*QTRSLL
Trigger: CAGCAGCGACCTTGTCTGCAAGATCTCTGGCTTCGG...ATCACAGCCAACTATGTTGTGCCATCCAACTGAAAGATGCATCCCAGTTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp TCACCATGGAGTAAGTCTGCTCACTCTGACCGGGGAAAAGAGCAGATTGGGATGGGGGAAAAGAGCAGATaGGGATGTGACTCCATTTGT +
Preference number: 5 (lower is better)
Translates to: SPWSKSAHSDRGKEQIGMGEKSR*GCDSIC
Trigger: ACAAATGGAGTCACATCCCAATCTGCTCTTTTCCCC...CATCCCAATCTGCTCTTTTCCCCGGTCAGAGTGAGCAGACTTACTCCATGGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000525749.1
CDS-3UTR CAA 90 bp TCCTTTATTGCCATGAAAATAAATAAACGAGAAGGCCTGTGCAAGGTGCCTAAGACTTCAGGGCTCTCCTaGGGCTCCAGAGTCCAAGGC +
Preference number: 5 (lower is better)
Translates to: SFIAMKINKREGLCKVPKTSGLS*GSRVQG
Trigger: GCCTTGGACTCTGGAGCCCAAGGAGAGCCCTGAAGT...CTTAGGCACCTTGCACAGGCCTTCTCGTTTATTTATTTTCATGGCAATAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR CAA 90 bp TCTGAAACTGGGATGCATCTTTCAGTTGGATGGCACAACATAGTTGGCTGTGATAGCCTTGATCACGTCTaGGCCAGACATGTCCCAGTA +
Preference number: 5 (lower is better)
Translates to: SETGMHLSVGWHNIVGCDSLDHV*ARHVPV
Trigger: TACTGGGACATGTCTGGCCAAGACGTGATCAAGGCT...ATCACAGCCAACTATGTTGTGCCATCCAACTGAAAGATGCATCCCAGTTTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp TCGAGGAAGGGGGCAGAAGCCCTTCCACACCAGCTATACAATGATCAAGCAACTGCGGCATCTCATTTATaGAAGACGTACATGTTAACA +
Preference number: 5 (lower is better)
Translates to: SRKGAEALPHQLYNDQATAASHL*KTYMLT
Trigger: TGTTAACATGTACGTCTTCAATAAATGAGATGCCGC...AGTTGCTTGATCATTGTATAGCTGGTGTGGAAGGGCTTCTGCCCCCTTCCTCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp CATCTTGATCTTGGCTTCCAGCCTCCAGAGCTGTGGGACAGTAAATCCCTCTATTGTGATGTTTCTTTCTaGGTAGGACATCTTACACTC +
Preference number: 5 (lower is better)
Translates to: HLDLGFQPPELWDSKSLYCDVSF*VGHLTL
Trigger: GAGTGTAAGATGTCCTACCAAGAAAGAAACATCACA...ATAGAGGGATTTACTGTCCCACAGCTCTGGAGGCTGGAAGCCAAGATCAAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432874.7
ENST00000437645.5
ENST00000534097.5
CDS-3UTR CAA 90 bp GGGAGCACAGTGATTGTAGTTCAGAGAGTGGGATGTGATCTTCGTAATCATCTAGTCATAGAATGTGAGTaGGGCAAGCCTGAATTCAAA +
Preference number: 5 (lower is better)
Translates to: GSTVIVVQRVGCDLRNHLVIECE*GKPEFK
Trigger: TTTGAATTCAGGCTTGCCCAACTCACATTCTATGAC...TAGATGATTACGAAGATCACATCCCACTCTCTGAACTACAATCACTGTGCTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319637.6
CDS-3UTR CAA 90 bp AACTGCCACTCAAAGAGGCACCATATCACAGACAAGTTTTTATTATCACCTGCAGCGGCATCTCATTTATaGAAGACGTACATGTTAACA +
Preference number: 5 (lower is better)
Translates to: NCHSKRHHITDKFLLSPAAASHL*KTYMLT
Trigger: TGTTAACATGTACGTCTTCAATAAATGAGATGCCGC...TGCAGGTGATAATAAAAACTTGTCTGTGATATGGTGCCTCTTTGAGTGGCAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437645.5
ENST00000534097.5
CDS CCA 72 bp TGCAGCAGCGTGGCGGCTCGCTCCCGCAGCCCTGCCTaGCGCGGTAGGAAGGCCACGCGCGGCCCGCACGGC +
Preference number: 6 (lower is better)
Translates to: CSSVAARSRSPA*RGRKATRGPHG
Trigger: GCCGTGCGGGCCGCGCGTGGCCTTCCTACCGCGCCAGGCAGGGCTGCGGGAGCGAGCCGCCACGCTGCTGCA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373048.9
ENST00000427468.6
CDS CCA 72 bp CGGTGTAGCGCGCGCCGGGCCGCAGGTGCAGCAGCGTaGCGGCTCGCTCCCGCAGCCCTGCCTGGCGCGGTA +
Preference number: 6 (lower is better)
Translates to: RCSARRAAGAAA*RLAPAALPGAV
Trigger: TACCGCGCCAGGCAGGGCTGCGGGAGCGAGCCGCCACGCTGCTGCACCTGCGGCCCGGCGCGCGCTACACCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373048.9
ENST00000427468.6
CDS TCA 72 bp CCTCGCGGCCGCAGCGCAGGCACAGCAGCGAGTAGGTaGCGTCCGAGCGGCCTCCCGAGTCGGCCGGCGGCA +
Preference number: 6 (lower is better)
Translates to: PRGRSAGTAASR*RPSGLPSRPAA
Trigger: TGCCGCCGGCCGACTCGGGAGGCCGCTCGGACGTCACCTACTCGCTGCTGTGCCTGCGCTGCGGCCGCGAGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373048.9
ENST00000427468.6
CDS GCA 72 bp AGTCGCAGCACCAGCGGCGAGCGGCTCAGGCTGTACTaGAGGTCCCGCGGCGCCGACGGCGGCCGGGTGCAG +
Preference number: 6 (lower is better)
Translates to: SRSTSGERLRLY*RSRGADGGRVQ
Trigger: CTGCACCCGGCCGCCGTCGGCGCCGCGGGACCTGCAGTACAGCCTGAGCCGCTCGCCGCTGGTGCTGCGACT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373048.9
ENST00000427468.6
CDS CCA 72 bp CACCAGTGTGGAGAAGGCGCTCTCGGCTGCGGTGGCTaGGAACGTGGCCAGGCCCCGCACGGTGGCGCGGCA +
Preference number: 6 (lower is better)
Translates to: HQCGEGALGCGG*ERGQAPHGGAA
Trigger: TGCCGCGCCACCGTGCGGGGCCTGGCCACGTTCCCAGCCACCGCAGCCGAGAGCGCCTTCTCCACACTGGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319637.6
ENST00000373048.9
ENST00000427468.6
CDS CCA 72 bp AGAGGCGCAGCGGGTGTGGACCGGCGCAGGTCTCCATaGTCCGCAGACCGAGCTGTCAGTCCGGCGGCGGCT +
Preference number: 6 (lower is better)
Translates to: RGAAGVDRRRSP*SADRAVSPAAA
Trigger: AGCCGCCGCCGGACTGACAGCTCGGTCTGCGGACCATGGAGACCTGCGCCGGTCCACACCCGCTGCGCCTCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319637.6
ENST00000373048.9
CDS CCA 72 bp TGGAGAAGGCGCTCTCGGCTGCGGTGGCTGGGAACGTaGCCAGGCCCCGCACGGTGGCGCGGCACTGCTTGT +
Preference number: 6 (lower is better)
Translates to: WRRRSRLRWLGT*PGPARWRGTAC
Trigger: ACAAGCAGTGCCGCGCCACCGTGCGGGGCCTGGCCACGTTCCCAGCCACCGCAGCCGAGAGCGCCTTCTCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319637.6
ENST00000373048.9
ENST00000427468.6
CDS CCA 72 bp CTTCCACCAGTGTGGAGAAGGCGCTCTCGGCTGCGGTaGCTGGGAACGTGGCCAGGCCCCGCACGGTGGCGC +
Preference number: 6 (lower is better)
Translates to: LPPVWRRRSRLR*LGTWPGPARWR
Trigger: GCGCCACCGTGCGGGGCCTGGCCACGTTCCCAGCCACCGCAGCCGAGAGCGCCTTCTCCACACTGGTGGAAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319637.6
ENST00000373048.9
ENST00000427468.6
CDS TCA 72 bp CGGCCGGGTGCAGGAAGCCGAGGGCGGGTCGGTGGGTaGGCGCGCATAGCTGTCCTGGCACACGCAGAAGGT +
Preference number: 6 (lower is better)
Translates to: RPGAGSRGRVGG*ARIAVLAHAEG
Trigger: ACCTTCTGCGTGTGCCAGGACAGCTATGCGCGCTCACCCACCGACCCGCCCTCGGCTTCCTGCACCCGGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373048.9
ENST00000427468.6
CDS GCA 72 bp GGCCACTTCCACCAGTGTGGAGAAGGCGCTCTCGGCTaGGGTGGCTGGGAACGTGGCCAGGCCCCGCACGGT +
Preference number: 6 (lower is better)
Translates to: GHFHQCGEGALG*GGWERGQAPHG
Trigger: ACCGTGCGGGGCCTGGCCACGTTCCCAGCCACCGCAGCCGAGAGCGCCTTCTCCACACTGGTGGAAGTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319637.6
ENST00000373048.9
ENST00000427468.6
CDS GCA 72 bp ACGACAGGGACACGCTCTGGGGTTCCACTCGGTCCCTaGGGATCTCATCCTCCTCCCAGGGCGCCCCGGGCC +
Preference number: 6 (lower is better)
Translates to: TTGTRSGVPLGP*GSHPPPRAPRA
Trigger: GGCCCGGGGCGCCCTGGGAGGAGGATGAGATCCGCAGGGACCGAGTGGAACCCCAGAGCGTGTCCCTGTCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373048.9
ENST00000427468.6
ENST00000437645.5
ENST00000525749.1
ENST00000540011.2
CDS CCA 72 bp GAGCTGCATCCGGCAGAGGAAGAGGCGCAGCGGGTGTaGACCGGCGCAGGTCTCCATGGTCCGCAGACCGAG +
Preference number: 6 (lower is better)
Translates to: ELHPAEEEAQRV*TGAGLHGPQTE
Trigger: CTCGGTCTGCGGACCATGGAGACCTGCGCCGGTCCACACCCGCTGCGCCTCTTCCTCTGCCGGATGCAGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319637.6
ENST00000373048.9
CDS GCA 72 bp GGCCGCCAGGGTCCCAAAAGCAGCGCGAGACAGAGCTaGATCCGGCAGAGGAAGAGGCGCAGCGGGTGTGGA +
Preference number: 6 (lower is better)
Translates to: GRQGPKSSARQS*IRQRKRRSGCG
Trigger: TCCACACCCGCTGCGCCTCTTCCTCTGCCGGATGCAGCTCTGTCTCGCGCTGCTTTTGGGACCCTGGCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319637.6
ENST00000373048.9
ENST00000427468.6
CDS CCA 72 bp GCAGGGATGGGCTCCCGCCACGACAGGGACACGCTCTaGGGTTCCACTCGGTCCCTGCGGATCTCATCCTCC +
Preference number: 6 (lower is better)
Translates to: AGMGSRHDRDTL*GSTRSLRISSS
Trigger: GGAGGATGAGATCCGCAGGGACCGAGTGGAACCCCAGAGCGTGTCCCTGTCGTGGCGGGAGCCCATCCCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373048.9
ENST00000427468.6
ENST00000437645.5
ENST00000446149.6
ENST00000525749.1
ENST00000540011.2
CDS TCA 72 bp AGCCCAGGACGAGGAGGGCCGAGATGGTCACTACGGTaGCGACAATGGCGGGGCTCTGGTCCCTGGACCCTG +
Preference number: 6 (lower is better)
Translates to: SPGRGGPRWSLR*RQWRGSGPWTL
Trigger: CAGGGTCCAGGGACCAGAGCCCCGCCATTGTCGTCACCGTAGTGACCATCTCGGCCCTCCTCGTCCTGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373048.9
ENST00000427468.6
ENST00000432874.7
ENST00000437645.5
ENST00000446149.6
ENST00000534097.5
ENST00000540011.2
CDS CCA 72 bp GTGAGCGCGCATAGCTGTCCTGGCACACGCAGAAGGTaGAGGCGTTTTCCAGGGCCCGGCTGTGCTCTGGGC +
Preference number: 6 (lower is better)
Translates to: VSAHSCPGTRRR*RRFPGPGCALG
Trigger: GCCCAGAGCACAGCCGGGCCCTGGAAAACGCCTCCACCTTCTGCGTGTGCCAGGACAGCTATGCGCGCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373048.9
ENST00000427468.6
CDS TCA 72 bp CCACGTCCTGAAAGGCCAGGTGGAAACCCCGCCGGCTaGGCGGTCCGATCTCGCGCACCTCTGTGTTCAGCT +
Preference number: 6 (lower is better)
Translates to: PRPERPGGNPAG*AVRSRAPLCSA
Trigger: AGCTGAACACAGAGGTGCGCGAGATCGGACCGCTCAGCCGGCGGGGTTTCCACCTGGCCTTTCAGGACGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319637.6
ENST00000373048.9
ENST00000427468.6
CDS GCA 72 bp ACGACAGGGACACGCTCTGGGGTTCCACTCGGTCCCTaGGGATCTCATCCTCCTCCCAGGGCGCTTCAGAGA +
Preference number: 6 (lower is better)
Translates to: TTGTRSGVPLGP*GSHPPPRALQR
Trigger: TCTCTGAAGCGCCCTGGGAGGAGGATGAGATCCGCAGGGACCGAGTGGAACCCCAGAGCGTGTCCCTGTCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446149.6
CDS CAA 72 bp GGCAGTGCAGTCCAGCCCAGCTCGGCCTGGGAGGCTTaGGAATCCAGGAGGATAACTTCCTCGGCGGTCCCA +
Preference number: 6 (lower is better)
Translates to: GSAVQPSSAWEA*ESRRITSSAVP
Trigger: TGGGACCGCCGAGGAAGTTATCCTCCTGGATTCCAAAGCCTCCCAGGCCGAGCTGGGCTGGACTGCACTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319637.6
ENST00000373048.9
ENST00000427468.6
CDS GCA 72 bp TCACGGAGTGTGAACTGCAGTTCCACGAAGATGCGCTaGCCGCGGCCACGGCTTATCCAGCCAGTCTGCAGC +
Preference number: 6 (lower is better)
Translates to: SRSVNCSSTKMR*PRPRLIQPVCS
Trigger: GCTGCAGACTGGCTGGATAAGCCGTGGCCGCGGGCAGCGCATCTTCGTGGAACTGCAGTTCACACTCCGTGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319637.6
ENST00000373048.9
ENST00000427468.6
CDS TCA 72 bp ACGTGCGGATGGGACGGTCGTGTTCATCCACGCCGCTaGTCTCCTCCCACCCATTACTTGGCAGTGCAGTCC +
Preference number: 6 (lower is better)
Translates to: TCGWDGRVHPRR*SPPTHYLAVQS
Trigger: GGACTGCACTGCCAAGTAATGGGTGGGAGGAGATCAGCGGCGTGGATGAACACGACCGTCCCATCCGCACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319637.6
ENST00000373048.9
ENST00000427468.6
CDS CCA 72 bp CGCTTCAGAGATAATCTAGCTCAGCTCCCACTGGCCTaGTCCTCCGGCAGCTTCCCCAGCAGTAGCCACAGT +
Preference number: 6 (lower is better)
Translates to: RFRDNLAQLPLA*SSGSFPSSSHS
Trigger: ACTGTGGCTACTGCTGGGGAAGCTGCCGGAGGACCAGGCCAGTGGGAGCTGAGCTAGATTATCTCTGAAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446149.6
CDS CCA 72 bp CTCTGTGAAATGGGGATTCCTCTCTGCCTTCCTCAGTaGGGGGAGGTTTCCAAGCCTCCTCCAAGGCTCCTC +
Preference number: 6 (lower is better)
Translates to: LCEMGIPLCLPQ*GEVSKPPPRLL
Trigger: GAGGAGCCTTGGAGGAGGCTTGGAAACCTCCCCCCACTGAGGAAGGCAGAGAGGAATCCCCATTTCACAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437645.5
CDS CCA 72 bp AAAGTGAGGGACCCCTGCCCGCTTTACAGAATAAAGTaGTCATTGGCAGCCCCAGGGCCACTCACCCTGAGG +
Preference number: 6 (lower is better)
Translates to: KVRDPCPLYRIK*SLAAPGPLTLR
Trigger: CCTCAGGGTGAGTGGCCCTGGGGCTGCCAATGACCACTTTATTCTGTAAAGCGGGCAGGGGTCCCTCACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453577.1
CDS CAA 90 bp CCCTCACAGCTCTCAGCAGGAAACAACCTTGCGCACATCTTGATCTaGGCTTCCAGCCTCCAGAGCTGTGGGACAGTAAATCCCTGTCGG +
Preference number: 6 (lower is better)
Translates to: PSQLSAGNNLAHILI*ASSLQSCGTVNPCR
Trigger: CCGACAGGGATTTACTGTCCCACAGCTCTGGAGGCTGGAAGCCAAGATCAAGATGTGCGCAAGGTTGTTTCCTGCTGAGAGCTGTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444950.1
CDS TCA 72 bp AGGTTTCCAAGCCTCCTCCAAGGCTCCTCTCCAGCGTaGCGCTTTTCGCATCCAGTTCCTTGGCGAACAGAT +
Preference number: 6 (lower is better)
Translates to: RFPSLLQGSSPA*RFSHPVPWRTD
Trigger: ATCTGTTCGCCAAGGAACTGGATGCGAAAAGCGTCACGCTGGAGAGGAGCCTTGGAGGAGGCTTGGAAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437645.5
ENST00000540011.2
CDS CCA 72 bp GCACATCTTGATCTTGGCTTCCAGCCTCCAGAGCTGTaGGACAGTAAATCCCTGTCGGCAAACCCATGGGTG +
Preference number: 6 (lower is better)
Translates to: AHLDLGFQPPEL*DSKSLSANPWV
Trigger: CACCCATGGGTTTGCCGACAGGGATTTACTGTCCCACAGCTCTGGAGGCTGGAAGCCAAGATCAAGATGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444950.1
CDS GCA 72 bp TTCCAAGCCCTACCAAAGAGAAAAGTGAGGGACCCCTaGCCGCTTTACAGAATAAAGTGGTCATTGGCAGCC +
Preference number: 6 (lower is better)
Translates to: FQALPKRKVRDP*PLYRIKWSLAA
Trigger: GGCTGCCAATGACCACTTTATTCTGTAAAGCGGGCAGGGGTCCCTCACTTTTCTCTTTGGTAGGGCTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453577.1
CDS CAA 90 bp CTGAGTACCAGCAGTGTGACCTCGAATTCCATCTCTTTCCTTTTCTaGGCCTGTCTCCTCTGTGAAATGGGGATTCCTCTCTGCCTTCCT +
Preference number: 6 (lower is better)
Translates to: LSTSSVTSNSISFLF*ACLLCEMGIPLCLP
Trigger: AGGAAGGCAGAGAGGAATCCCCATTTCACAGAGGAGACAGGCCAAGAAAAGGAAAGAGATGGAATTCGAGGTCACACTGCTGGTACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437645.5
CDS GCA 72 bp TCGGCAAACCCATGGGTGCTGTGTTACAGTCTGAGGTaGTGTGTTACAGTAGCCCAAGCAAATGAATACACT +
Preference number: 6 (lower is better)
Translates to: SANPWVLCYSLR*CVTVAQANEYT
Trigger: AGTGTATTCATTTGCTTGGGCTACTGTAACACAGCACCTCAGACTGTAACACAGCACCCATGGGTTTGCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444950.1