RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPHA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000146904

Ensembl transcript IDs: ENST00000275815.4, ENST00000458129.1, ENST00000465208.5, ENST00000479459.1, ENST00000488068.5, ENST00000494989.1, ENST00000497891.1, ENST00000642708.1, ENST00000643917.1, ENST00000644029.1, ENST00000645510.1, ENST00000645847.2, ENST00000646228.1, ENST00000647400.1

Found 345 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGTTCTCCTGAAAGTGGGCAGAAGCAGCACCGATAGCCTAGTCTaGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCT +
Preference number: 1 (lower is better)
Translates to: RVLLKVGRSSTDSLV*QVVGRGAGSDHERP
Trigger: AGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCCCACTTTCAGGAGAACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
3UTR-3UTR GCA 90 bp GGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGCCCGTCCTTGCTCCTTaGACCCTGATTGGGCATGGG +
Preference number: 2 (lower is better)
Translates to: GRSSTDSLVWQVVGRGAGPVLAP*TLIGHG
Trigger: CCCATGCCCAATCAGGGTGCAAGGAGCAAGGACGGG...CCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
3UTR-3UTR GCA 90 bp TGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACCCCCGTCCTTGCTCCTTaGACCCTGATTGGGCATGGG +
Preference number: 2 (lower is better)
Translates to: CIYINPSAPSHDHPFTSTPVLAP*TLIGHG
Trigger: CCCATGCCCAATCAGGGTGCAAGGAGCAAGGACGGG...GGTAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
3UTR-3UTR CCA 90 bp TGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACCACCGATAGCCTAGTCTaGCAGGTTGTGGGAAGGGGC +
Preference number: 2 (lower is better)
Translates to: CIYINPSAPSHDHPFTSTTDSLV*QVVGRG
Trigger: GCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGT...GGTAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
3UTR-3UTR TCA 90 bp TATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTAAGAGCAGGGTTCTCCTaGAAGTGGGCAGAAGCAGCA +
Preference number: 2 (lower is better)
Translates to: YVYILTPQLPPMIILLLLRAGFS*KWAEAA
Trigger: TGCTGCTTCTGCCCACTTTCAGGAGAACCCTGCTCT...TAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
3UTR-3UTR CCA 90 bp TATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTAAACAAAGAGGTTTTCTaGGGTGCAGAGCAGGGTTCT +
Preference number: 2 (lower is better)
Translates to: YVYILTPQLPPMIILLLLNKEVF*GAEQGS
Trigger: AGAACCCTGCTCTGCACCCCAGAAAACCTCTTTGTT...TAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
3UTR CCA 72 bp CTGAAAGTGGGCAGAAGCAGCACCGATAGCCTAGTCTaGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCAT +
Preference number: 3 (lower is better)
Translates to: LKVGRSSTDSLV*QVVGRGAGSDH
Trigger: ATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCCCACTTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
3UTR-3UTR CAA 90 bp GTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTCCCCGTCCTTGCTCCTaGCACCCTGATTGGGCATGG +
Preference number: 3 (lower is better)
Translates to: VCIYINPSAPSHDHPFTSPRPCS*HPDWAW
Trigger: CCATGCCCAATCAGGGTGCAAGGAGCAAGGACGGGG...AGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
3UTR-3UTR CAA 90 bp TATATGTGTATGTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCCCCGTCCTTGCTCCTaGCACCCTGATTGGGCATGG +
Preference number: 3 (lower is better)
Translates to: YMCMYVYILTPQLPPMIIPRPCS*HPDWAW
Trigger: CCATGCCCAATCAGGGTGCAAGGAGCAAGGACGGGG...GATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATACATACACATATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp GGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCGGGACCTGGGACAGTaGCCCGGATGGCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: GRLWEGAQGVTMSDLGPVRDLGQ*PGWQRQ
Trigger: CTGGCGCTGCCATCCGGGCCACTGTCCCAGGTCCCG...GACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp CTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCTCCGGGCCGGGACCTaGGACAGTGGCCCGGATGGC +
Preference number: 4 (lower is better)
Translates to: LVWQVVGRGAGSDHERPWLRAGT*DSGPDG
Trigger: GCCATCCGGGCCACTGTCCCAGGTCCCGGCCCGGAG...CCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp AGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGCCCCCGGCGAGAAGTaGACGCCCACCCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: STDSLVWQVVGRGAGSDHAPGEK*TPTPQG
Trigger: GCCCTGTGGGGTGGGCGTGCACTTCTCGCCGGGGGC...ATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp TGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTTGCCTCTGCTGCCTCTaGCGCTGGGCTCTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: WEGAQGVTMSDLGPVLAPCLCCL*RWALLD
Trigger: GTCCAGGAGAGCCCAGCGGCAGAGGCAGCAGAGGCA...AGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp TGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTTCACGCTGCCTCTGCTaGCTCTGCCGCTGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: WEGAQGVTMSDLGPVLAPSRCLC*LCRWAL
Trigger: GAGAGCCCAGCGGCAGAGGCAGCAGAGGCAGCGTGA...AGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp GGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCGTCCAGGGCTCCCTGTaGAGGGTCCTCGTATGCCTG +
Preference number: 4 (lower is better)
Translates to: GRLWEGAQGVTMSDLGPVVQGSL*RVLVCL
Trigger: CAGGCATACGAGGACCCTGCACAGGGAGCCCTGGAC...GACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTCTCCAGTCAGGCCCCTaGACACTGGTGGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: WEGAQGVTMSDLGPVLAPLQSGP*TLVGWS
Trigger: GGACCAGCCCACCAGTGTCCAGGGGCCTGACTGGAG...AGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp AGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTCAGGGCTGCAGTGCATaGGGGGTGCACCTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SLVWQVVGRGAGSDHERPQGCSA*GVHLRA
Trigger: GGCCCTCAGGTGCACCCCGCATGCACTGCAGCCCTG...AGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp TGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTCCATCAGGGCTGCAGTaGATGCGGGGTGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: WEGAQGVTMSDLGPVLAPPSGLQ*MRGAPE
Trigger: CTCAGGTGCACCCCGCATGCACTGCAGCCCTGATGG...AGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp TGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTACTCGCCATCAGGGCTaGAGTGCATGCGGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: WEGAQGVTMSDLGPVLAPTRHQG*SACGVH
Trigger: GTGCACCCCGCATGCACTGCAGCCCTGATGGCGAGT...AGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp GGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTTGCACCCTGATTGGCGGTCACGCTGCCTCTaGTGCCTCTGCCGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GSDHERPWPRPCSLHPDWRSRCL*CLCRWA
Trigger: AGCCCAGCGGCAGAGGCAGCAGAGGCAGCGTGACCG...CCAATCAGGGTGCAAGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp TGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTAGCATGGCCACTAGCTaGCCAGGGACCAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: WEGAQGVTMSDLGPVLAPSMATS*PGTSWS
Trigger: GGACCAGCTGGTCCCTGGGCAGCTAGTGGCCATGCT...AGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp AGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATCGGGACCTGGGACAGTaGCCCGGATGGCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: STDSLVWQVVGRGAGSDHRDLGQ*PGWQRQ
Trigger: CTGGCGCTGCCATCCGGGCCACTGTCCCAGGTCCCG...ATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp GGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCAGGGCCAGGACCCAGTaGGGTCAGCATTCGGACTCT +
Preference number: 4 (lower is better)
Translates to: GRLWEGAQGVTMSDLGPVRARTQ*GQHSDS
Trigger: AGAGTCCGAATGCTGACCCCACTGGGTCCTGGCCCT...GACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp GGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGCTCCAGTCAGGCCCCTaGACACTGGTGGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: GRSSTDSLVWQVVGRGAGLQSGP*TLVGWS
Trigger: GGACCAGCCCACCAGTGTCCAGGGGCCTGACTGGAG...CCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp GGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCTCCTGTGCTGTGCCCTaGCACTGGGAACACCTCACA +
Preference number: 4 (lower is better)
Translates to: GRLWEGAQGVTMSDLGPVSCAVP*HWEHLT
Trigger: TGTGAGGTGTTCCCAGTGTCAGGGCACAGCACAGGA...GACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp AGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTCCCCGTCCTGTGCTGTaGCCTGACACTGGGAACACC +
Preference number: 4 (lower is better)
Translates to: RLWEGAQGVTMSDLGPVLPRPVL*PDTGNT
Trigger: GGTGTTCCCAGTGTCAGGGCACAGCACAGGACGGGG...AAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp GGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTTGCACCCTGATTGGTGCCTCTGCTGCCTCTaGCGCTGGGCTCTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: GSDHERPWPRPCSLHPDWCLCCL*RWALLD
Trigger: GTCCAGGAGAGCCCAGCGGCAGAGGCAGCAGAGGCA...CCAATCAGGGTGCAAGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp GGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGCAGGCCCCTGGACACTaGTGGGCTGGTCCGAAACTC +
Preference number: 4 (lower is better)
Translates to: GRSSTDSLVWQVVGRGAGQAPGH*WAGPKL
Trigger: GAGTTTCGGACCAGCCCACCAGTGTCCAGGGGCCTG...CCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp GGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGTGCTGCCTCTGCCGCTaGGCTCTCCTGGACCGGAAA +
Preference number: 4 (lower is better)
Translates to: GRSSTDSLVWQVVGRGAGCCLCR*ALLDRK
Trigger: TTTCCGGTCCAGGAGAGCCCAGCGGCAGAGGCAGCA...CCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp GGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGCTCGATCCACATCGGTaGCGCGGTCACGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: GRSSTDSLVWQVVGRGAGLDPHR*RGHAAS
Trigger: AGAGGCAGCGTGACCGCGCCACCGATGTGGATCGAG...CCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTCCAGCACACACTCCATaGTGTCCAGCCCAGCCGAGT +
Preference number: 4 (lower is better)
Translates to: WEGAQGVTMSDLGPVLAPPAHTP*CPAQPS
Trigger: ACTCGGCTGGGCTGGACACCATGGAGTGTGTGCTGG...AGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp TGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTGGAGAGCTGAGTCCCTaGGGCAGAGAAGCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: WEGAQGVTMSDLGPVLAPGELSP*GREAQV
Trigger: AACCTGAGCTTCTCTGCCTCAGGGACTCAGCTCTCC...AGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp TGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTTCCTGTGCTGTGCCCTaGCACTGGGAACACCTCACA +
Preference number: 4 (lower is better)
Translates to: WEGAQGVTMSDLGPVLAPSCAVP*HWEHLT
Trigger: TGTGAGGTGTTCCCAGTGTCAGGGCACAGCACAGGA...AGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp TGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTCATGCTGATGCTGACTaGGGTGCTGGCATGGCCAGA +
Preference number: 4 (lower is better)
Translates to: WEGAQGVTMSDLGPVLAPHADAD*GAGMAR
Trigger: TCTGGCCATGCCAGCACCTCAGTCAGCATCAGCATG...AGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp GGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCCCAGCAGTTCTTCATaGGCTCATACAGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GRLWEGAQGVTMSDLGPVPSSSS*AHTEGQ
Trigger: CTGCCCCTCTGTATGAGCTCATGAAGAACTGCTGGG...GACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp GGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCACATGCTTCGCCACTaGCACCTTCCTCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: GRLWEGAQGVTMSDLGPVHMLRH*HLPHSQ
Trigger: CTGGCTATGAGGAAGGTGGCAGTGGCGAAGCATGTG...GACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp CTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGGTCCAGGGCTCCCTGTaGAGGGTCCTCGTATGCCTG +
Preference number: 4 (lower is better)
Translates to: LVWQVVGRGAGSDHERPWVQGSL*RVLVCL
Trigger: CAGGCATACGAGGACCCTGCACAGGGAGCCCTGGAC...CCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp GGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGCCTTGGCCCCGTCCTTaGTCCTTGCACCCTGATTGG +
Preference number: 4 (lower is better)
Translates to: GRSSTDSLVWQVVGRGAGPWPRP*SLHPDW
Trigger: CCAATCAGGGTGCAAGGAGCAAGGACGGGGCCAAGG...CCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTACTCCACCCATCTTTTaGGGGATCCAGCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: WEGAQGVTMSDLGPVLAPTPPIF*GIQQPA
Trigger: GGCTGGCTGCTGGATCCCCCAAAAGATGGGTGGAGT...AGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTACCGTGGTTACCTTCTaGAACAAGGGCCGTCGGAGC +
Preference number: 4 (lower is better)
Translates to: WEGAQGVTMSDLGPVLAPTVVTF*NKGRRS
Trigger: GCTCCGACGGCCCTTGTTCCAGAAGGTAACCACGGT...AGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp CTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCTCGATCCACATCGGTaGCGCGGTCACGCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: LVWQVVGRGAGSDHERPWLDPHR*RGHAAS
Trigger: AGAGGCAGCGTGACCGCGCCACCGATGTGGATCGAG...CCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTGCAGGGAGTGGGGGTTaGCAAGCAGTTGCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: WEGAQGVTMSDLGPVLAPAGSGG*QAVAPD
Trigger: ATCTGGAGCAACTGCTTGCCAACCCCCACTCCCTGC...AGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp GGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGATGGTCCGCAGGGAGTaGGGGTTGGCAAGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: GRSSTDSLVWQVVGRGAGMVRRE*GLASSC
Trigger: GCAACTGCTTGCCAACCCCCACTCCCTGCGGACCAT...CCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp CTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGAAGGGCCGTCGGAGCTaGATGCCCACATCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: LVWQVVGRGAGSDHERPWKGRRS*MPTSWS
Trigger: TGACCAGGATGTGGGCATTCAGCTCCGACGGCCCTT...CCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp GGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTTGCACCCTGATTGGCAACGCAGGGAGAGCTaGGTCCCTGAGGCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: GSDHERPWPRPCSLHPDWQRRES*VPEAEK
Trigger: CTTCTCTGCCTCAGGGACTCAGCTCTCCCTGCGTTG...CCAATCAGGGTGCAAGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp AGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTCATGCTGATGCTGACTaGGGTGCTGGCATGGCCAGA +
Preference number: 4 (lower is better)
Translates to: RLWEGAQGVTMSDLGPVLHADAD*GAGMAR
Trigger: TCTGGCCATGCCAGCACCTCAGTCAGCATCAGCATG...AAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp GGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCACTCTCCTTCTCCTATaGCAGTGTCCACCATCAGCC +
Preference number: 4 (lower is better)
Translates to: GRLWEGAQGVTMSDLGPVTLLLL*QCPPSA
Trigger: GGCTGATGGTGGACACTGTCATAGGAGAAGGAGAGT...GACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp AGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCCCAGCTCTCCCTGTaGCTTGCTTGTGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: RLWEGAQGVTMSDLGPVLAQLSL*LACVHQ
Trigger: CTGATGGACACAAGCAAGGCACAGGGAGAGCTGGGC...AAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp CTGAAAGTGGGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGCAGGGCTGCAGTGCATaGGGGGTGCACCTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LKVGRSSTDSLVWQVVGRQGCSA*GVHLRA
Trigger: GGCCCTCAGGTGCACCCCGCATGCACTGCAGCCCTG...CCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCCCACTTTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp AGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATACTCGCCATCAGGGCTaGAGTGCATGCGGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: STDSLVWQVVGRGAGSDHTRHQG*SACGVH
Trigger: GTGCACCCCGCATGCACTGCAGCCCTGATGGCGAGT...ATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp AGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTGCCATTGACATGCACTaGAGGTGTGGTGAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: SLVWQVVGRGAGSDHERPAIDMH*RCGEPP
Trigger: CGGGGGCTCACCACACCTGCAGTGCATGTCAATGGC...AGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp GGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCTCCAGATGCAGAATATaGGGGTGGCTAAACTGGCCC +
Preference number: 4 (lower is better)
Translates to: GRLWEGAQGVTMSDLGPVSRCRI*GWLNWP
Trigger: GGGCCAGTTTAGCCACCCGCATATTCTGCATCTGGA...GACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp AGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTCCTTGGCCCCGTCCTTaGTCCTTGCACCCTGATTGG +
Preference number: 4 (lower is better)
Translates to: SLVWQVVGRGAGSDHERPPWPRP*SLHPDW
Trigger: CCAATCAGGGTGCAAGGAGCAAGGACGGGGCCAAGG...AGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTTTGGAGCGAAGCCAGTaGTCAGTGTCTCTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: WEGAQGVTMSDLGPVLAPLERSQ*SVSLRP
Trigger: AGGACGCAGAGACACTGACCACTGGCTTCGCTCCAA...AGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp AGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATAACTGCAGCTCCACGTaGACGCGGGAAGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: STDSLVWQVVGRGAGSDHNCSST*TREASS
Trigger: GGAGGAGGCTTCCCGCGTCCACGTGGAGCTGCAGTT...ATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp AGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTACCGTGGTTACCTTCTaGAACAAGGGCCGTCGGAGC +
Preference number: 4 (lower is better)
Translates to: RLWEGAQGVTMSDLGPVLTVVTF*NKGRRS
Trigger: GCTCCGACGGCCCTTGTTCCAGAAGGTAACCACGGT...AAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp GGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCAGAGTGTCTGGGAATTaGGCCAAGCCATTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GRLWEGAQGVTMSDLGPVRVSGN*AKPFRV
Trigger: GACCCTGAATGGCTTGGCCCAATTCCCAGACACTCT...GACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTGCCAGGCAGAGTGTCTaGGAATTGGGCCAAGCCATT +
Preference number: 4 (lower is better)
Translates to: WEGAQGVTMSDLGPVLAPARQSV*ELGQAI
Trigger: AATGGCTTGGCCCAATTCCCAGACACTCTGCCTGGC...AGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp GGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTTGCACCCTGATTGGAGGGCCAGGACCCAGTaGGGTCAGCATTCGGACTCT +
Preference number: 4 (lower is better)
Translates to: GSDHERPWPRPCSLHPDWRARTQ*GQHSDS
Trigger: AGAGTCCGAATGCTGACCCCACTGGGTCCTGGCCCT...CCAATCAGGGTGCAAGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp GGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTTGCACCCTGATTGGGCCCCTGGACACTGGTaGGCTGGTCCGAAACTCATG +
Preference number: 4 (lower is better)
Translates to: GSDHERPWPRPCSLHPDWAPGHW*AGPKLM
Trigger: CATGAGTTTCGGACCAGCCCACCAGTGTCCAGGGGC...CCAATCAGGGTGCAAGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp GGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTTGCACCCTGATTGGGCCGCTGGGCTCTCCTaGACCGGAAAACGAGAATCC +
Preference number: 4 (lower is better)
Translates to: GSDHERPWPRPCSLHPDWAAGLS*TGKRES
Trigger: GGATTCTCGTTTTCCGGTCCAGGAGAGCCCAGCGGC...CCAATCAGGGTGCAAGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp CTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCTATGCCCTGCAGCATaGCCACTAGCTGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LVWQVVGRGAGSDHERPWLCPAA*PLAAQG
Trigger: TCCCTGGGCAGCTAGTGGCCATGCTGCAGGGCATAG...CCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp GGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAAGCTTCTGGAAGTGTaGCCGGCGGGCACGGTCATA +
Preference number: 4 (lower is better)
Translates to: GRSSTDSLVWQVVGRGAGKLLEV*PAGTVI
Trigger: TATGACCGTGCCCGCCGGCCACACTTCCAGAAGCTT...CCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp GGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGGGTCAAAGTTGGCAATaGTCCGCAGGGAGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: GRSSTDSLVWQVVGRGAGGQSWQ*SAGSGG
Trigger: ACCCCCACTCCCTGCGGACCATTGCCAACTTTGACC...CCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp GGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTTGCACCCTGATTGGCTGAGCCACTCAGGCTaGGCAGGCGAAGAGTCATCC +
Preference number: 4 (lower is better)
Translates to: GSDHERPWPRPCSLHPDWLSHSG*AGEESS
Trigger: GGATGACTCTTCGCCTGCCCAGCCTGAGTGGCTCAG...CCAATCAGGGTGCAAGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp AGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTTCCTTGCACCCTGATTaGGCATGGGGTGAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RLWEGAQGVTMSDLGPVLSLHPD*AWGERR
Trigger: CCTCCTCTCACCCCATGCCCAATCAGGGTGCAAGGA...AAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp CTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGGACCATGAGCGACCTTaGCCCCGTCCTTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LVWQVVGRGAGSDHERPWDHERP*PRPCSL
Trigger: CAAGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTC...CCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp GGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTTGCACCCTGATTGGGGAGAGCTGAGTCCCTaGGGCAGAGAAGCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: GSDHERPWPRPCSLHPDWGELSP*GREAQV
Trigger: AACCTGAGCTTCTCTGCCTCAGGGACTCAGCTCTCC...CCAATCAGGGTGCAAGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp GGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCTCAGCATTCGGACTCTaGCGATGTATGTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: GRLWEGAQGVTMSDLGPVSAFGL*RCMWCQ
Trigger: CTGACACCACATACATCGTCAGAGTCCGAATGCTGA...GACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp AGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTCATCGCTGGCTGTGGTaGAGATCCGATGGGCAATGG +
Preference number: 4 (lower is better)
Translates to: SLVWQVVGRGAGSDHERPHRWLW*RSDGQW
Trigger: CCATTGCCCATCGGATCTTCACCACAGCCAGCGATG...AGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp AGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTGCCGTCGGAGCTGAATaGCCACATCCTGGTCACTCT +
Preference number: 4 (lower is better)
Translates to: SLVWQVVGRGAGSDHERPAVGAE*PHPGHS
Trigger: AGAGTGACCAGGATGTGGGCATTCAGCTCCGACGGC...AGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp GGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGGGTGAAGCTCTGGTCTaGAGCCACCGTGGTTACCTT +
Preference number: 4 (lower is better)
Translates to: GRSSTDSLVWQVVGRGAGGEALV*SHRGYL
Trigger: AAGGTAACCACGGTGGCTGCAGACCAGAGCTTCACC...CCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp CTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGGACTCAGCAGTGCTCTaGTGGGGGCACGTGAGACAA +
Preference number: 4 (lower is better)
Translates to: LVWQVVGRGAGSDHERPWDSAVL*WGHVRQ
Trigger: TTGTCTCACGTGCCCCCAGCAGAGCACTGCTGAGTC...CCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp GGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCAGGTCAGCTCTAGTTaGCTCGGTTCTTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: GRLWEGAQGVTMSDLGPVQVSSS*LGSFFT
Trigger: GGTGAAGAAAGAACCGAGGCAACTAGAGCTGACCTG...GACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp AGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTCCCAAGCAGCAAGGCTaGACCAAGCAGCAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: SLVWQVVGRGAGSDHERPPKQQG*TKQQPK
Trigger: TTTGGGCTGCTGCTTGGTGCAGCCTTGCTGCTTGGG...AGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp GGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGTGATTCCCATCTaGGTCAGGTCCTCAGCGGTC +
Preference number: 4 (lower is better)
Translates to: GRSSTDSLVWQVVGRGAGSVIPI*VRSSAV
Trigger: GACCGCTGAGGACCTGACGCAGATGGGAATCACACT...CCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp CTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGAGAATGCGCTTCTGGTaGCCGGGCAGTGTGATTCCC +
Preference number: 4 (lower is better)
Translates to: LVWQVVGRGAGSDHERPWRMRFW*PGSVIP
Trigger: GGGAATCACACTGCCCGGGCACCAGAAGCGCATTCT...CCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp AGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATCCCGTCCTTGCTCCTTaGACCCTGATTGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: STDSLVWQVVGRGAGSDHPVLAP*TLIGHG
Trigger: CCCATGCCCAATCAGGGTGCAAGGAGCAAGGACGGG...ATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp AGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTCAGCAGTGCTCTGCTaGGGGCACGTGAGACAATGG +
Preference number: 4 (lower is better)
Translates to: SLVWQVVGRGAGSDHERPSAVLC*GHVRQW
Trigger: CCATTGTCTCACGTGCCCCCAGCAGAGCACTGCTGA...AGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp AGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGCCCCTGGACACTGGTaGGCTGGTCCGAAACTCATG +
Preference number: 4 (lower is better)
Translates to: STDSLVWQVVGRGAGSDHAPGHW*AGPKLM
Trigger: CATGAGTTTCGGACCAGCCCACCAGTGTCCAGGGGC...ATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp GGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGCACCATCAGCCACGCTaGATCAAGCTCCCGGGTAAA +
Preference number: 4 (lower is better)
Translates to: GRSSTDSLVWQVVGRGAGHHQPR*IKLPGK
Trigger: TTTACCCGGGAGCTTGATCCAGCGTGGCTGATGGTG...CCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp AGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATCTATGCCCTGCAGCATaGCCACTAGCTGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: STDSLVWQVVGRGAGSDHLCPAA*PLAAQG
Trigger: TCCCTGGGCAGCTAGTGGCCATGCTGCAGGGCATAG...ATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp AGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTAGATCCGATGGGCAATaGCTTCAGGGGCTGTCCAAC +
Preference number: 4 (lower is better)
Translates to: RLWEGAQGVTMSDLGPVLRSDGQ*LQGLSN
Trigger: GTTGGACAGCCCCTGAAGCCATTGCCCATCGGATCT...AAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp AGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATATGGTCCGCAGGGAGTaGGGGTTGGCAAGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: STDSLVWQVVGRGAGSDHMVRRE*GLASSC
Trigger: GCAACTGCTTGCCAACCCCCACTCCCTGCGGACCAT...ATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp GGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGTCCTGGGGTCAAAGTTaGCAATGGTCCGCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: GRSSTDSLVWQVVGRGAGSWGQS*QWSAGS
Trigger: ACTCCCTGCGGACCATTGCCAACTTTGACCCCAGGA...CCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp CTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGACCGATAGCCTAGTCTaGCAGGTTGTGGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: LVWQVVGRGAGSDHERPWTDSLV*QVVGRG
Trigger: GCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGT...CCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp AGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTCCATGTACAGAAGGTTaGAGGTCTCCTTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: RLWEGAQGVTMSDLGPVLPCTEG*RSPCSP
Trigger: TGGGCTGCAAGGAGACCTTCAACCTTCTGTACATGG...AAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp TGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTTCAGCATTCGGACTCTaGCGATGTATGTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: WEGAQGVTMSDLGPVLAPSAFGL*RCMWCQ
Trigger: CTGACACCACATACATCGTCAGAGTCCGAATGCTGA...AGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp CTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGGCAGCAGCCCAAAGATaGCGGCTACAATCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LVWQVVGRGAGSDHERPWAAAQR*RLQSLL
Trigger: GAGGAGAGATTGTAGCCGTCATCTTTGGGCTGCTGC...CCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp CTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCAGCAGTTCTTCATaGGCTCATACAGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LVWQVVGRGAGSDHERPWPSSSS*AHTEGQ
Trigger: CTGCCCCTCTGTATGAGCTCATGAAGAACTGCTGGG...CCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp GGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCGGAGGGATCAGTCCTTaGATCCCTGAATACTGCAAA +
Preference number: 4 (lower is better)
Translates to: GRLWEGAQGVTMSDLGPVGGISP*IPEYCK
Trigger: TTTGCAGTATTCAGGGATTCAAGGACTGATCCCTCC...GACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp GGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTCAGCTCCCTCCCATaGTCATCCTTTTACTTCTAC +
Preference number: 4 (lower is better)
Translates to: GRLWEGAQGVTMSDLGPVLSSLP*SSFYFY
Trigger: GTAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAG...GACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp AGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTGTGTCTCTGCGTCCTTaGATTGGGCAGTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: SLVWQVVGRGAGSDHERPVSLRP*IGQSWY
Trigger: GTACCAGGACTGCCCAATGCAAGGACGCAGAGACAC...AGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp CTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGGGTGAAGCTCTGGTCTaGAGCCACCGTGGTTACCTT +
Preference number: 4 (lower is better)
Translates to: LVWQVVGRGAGSDHERPWGEALV*SHRGYL
Trigger: AAGGTAACCACGGTGGCTGCAGACCAGAGCTTCACC...CCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp CTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCACATGCTTCGCCACTaGCACCTTCCTCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: LVWQVVGRGAGSDHERPWHMLRH*HLPHSQ
Trigger: CTGGCTATGAGGAAGGTGGCAGTGGCGAAGCATGTG...CCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp GGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGTCAAGGCCATTGACATaGACTGCAGGTGTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: GRSSTDSLVWQVVGRGAGSRPLT*TAGVVS
Trigger: GCTCACCACACCTGCAGTGCATGTCAATGGCCTTGA...CCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp GGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGGACAGTGACTCTGCATaGCCCATGCTGATGCTGACT +
Preference number: 4 (lower is better)
Translates to: GRSSTDSLVWQVVGRGAGDSDSA*PMLMLT
Trigger: AGTCAGCATCAGCATGGGGCATGCAGAGTCACTGTC...CCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp CTGAAAGTGGGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGAGCATGGCCACTAGCTaGCCAGGGACCAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LKVGRSSTDSLVWQVVGRSMATS*PGTSWS
Trigger: GGACCAGCTGGTCCCTGGGCAGCTAGTGGCCATGCT...CCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCCCACTTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp GGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGTCATGCCAGATGCTATaGCCTGCAGCATGGCCACTA +
Preference number: 4 (lower is better)
Translates to: GRSSTDSLVWQVVGRGAGSCQML*PAAWPL
Trigger: TAGTGGCCATGCTGCAGGGCATAGCATCTGGCATGA...CCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp AGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTGCGGGCACGGTCATATaGCCAGCAGTTCTTCATGAG +
Preference number: 4 (lower is better)
Translates to: SLVWQVVGRGAGSDHERPAGTVI*PAVLHE
Trigger: CTCATGAAGAACTGCTGGGCATATGACCGTGCCCGC...AGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp GGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTTGCACCCTGATTGGAGTGTGATTCCCATCTaGGTCAGGTCCTCAGCGGTC +
Preference number: 4 (lower is better)
Translates to: GSDHERPWPRPCSLHPDWSVIPI*VRSSAV
Trigger: GACCGCTGAGGACCTGACGCAGATGGGAATCACACT...CCAATCAGGGTGCAAGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp GGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGGAATACTGCAAAGAATaGGCTTCTGGTGCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: GRSSTDSLVWQVVGRGAGEYCKE*ASGARA
Trigger: TGCCCGGGCACCAGAAGCGCATTCTTTGCAGTATTC...CCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp AGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTGGTCTGCAGCCACCGTaGTTACCTTCTGGAACAAGG +
Preference number: 4 (lower is better)
Translates to: SLVWQVVGRGAGSDHERPGLQPP*LPSGTR
Trigger: CCTTGTTCCAGAAGGTAACCACGGTGGCTGCAGACC...AGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp CTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGGCCAGGCAGAGTGTCTaGGAATTGGGCCAAGCCATT +
Preference number: 4 (lower is better)
Translates to: LVWQVVGRGAGSDHERPWARQSV*ELGQAI
Trigger: AATGGCTTGGCCCAATTCCCAGACACTCTGCCTGGC...CCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp AGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATCACAGGTACAGATGGTaGCCCCCTCAGACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: STDSLVWQVVGRGAGSDHHRYRW*PPQTQQ
Trigger: CTGCTGAGTCTGAGGGGGCCACCATCTGTACCTGTG...ATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTTACCGTTCTTCATCCTaGTTCAGCACGTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: WEGAQGVTMSDLGPVLAPYRSSS*FSTCSS
Trigger: TGAGCTGCACGTGCTGAACCAGGATGAAGAACGGTA...AGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp AGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTTGCGGGTGGCTAAACTaGCCCATGATAGTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: RLWEGAQGVTMSDLGPVLCGWLN*PMIVAS
Trigger: AGAGGCAACTATCATGGGCCAGTTTAGCCACCCGCA...AAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp GGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTTGCACCCTGATTGGTCCTGGGGTCAAAGTTaGCAATGGTCCGCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: GSDHERPWPRPCSLHPDWSWGQS*QWSAGS
Trigger: ACTCCCTGCGGACCATTGCCAACTTTGACCCCAGGA...CCAATCAGGGTGCAAGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp AGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGGCGAAGAGTCATCCTaGGGTCAAAGTTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: RLWEGAQGVTMSDLGPVLGEESS*GQSWQW
Trigger: CCATTGCCAACTTTGACCCCAGGATGACTCTTCGCC...AAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp GGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGCAAAGAATGCGCTTCTaGTGCCCGGGCAGTGTGATT +
Preference number: 4 (lower is better)
Translates to: GRSSTDSLVWQVVGRGAGQRMRF*CPGSVI
Trigger: AATCACACTGCCCGGGCACCAGAAGCGCATTCTTTG...CCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp AGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTCCATGTACAGAAGGTTaGAGGTCTCCTTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SLVWQVVGRGAGSDHERPPCTEG*RSPCSP
Trigger: TGGGCTGCAAGGAGACCTTCAACCTTCTGTACATGG...AGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp AGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATAGAGCAGGGTTCTCCTaGAAGTGGGCAGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: STDSLVWQVVGRGAGSDHRAGFS*KWAEAA
Trigger: TGCTGCTTCTGCCCACTTTCAGGAGAACCCTGCTCT...ATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp AGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTAGTGGTCAGTGTCTCTaGGTCCTTGCATTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: SLVWQVVGRGAGSDHERPSGQCL*VLALGS
Trigger: ACTGCCCAATGCAAGGACGCAGAGACACTGACCACT...AGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp AGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTCAGGTCAGCTCTAGTTaGCTCGGTTCTTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: RLWEGAQGVTMSDLGPVLQVSSS*LGSFFT
Trigger: GGTGAAGAAAGAACCGAGGCAACTAGAGCTGACCTG...AAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp GGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTTGCACCCTGATTGGTATGTGGTGTCAGGCTaGAGCTCTGTCAGCAAGACC +
Preference number: 4 (lower is better)
Translates to: GSDHERPWPRPCSLHPDWYVVSG*SSVSKT
Trigger: GGTCTTGCTGACAGAGCTGCAGCCTGACACCACATA...CCAATCAGGGTGCAAGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp AGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATTGCAGGGTCCTCGTATaGCTGGAGGTCCACATAAGG +
Preference number: 4 (lower is better)
Translates to: STDSLVWQVVGRGAGSDHCRVLV*LEVHIR
Trigger: CCTTATGTGGACCTCCAGGCATACGAGGACCCTGCA...ATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp CTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGTCATGCCAGATGCTATaGCCTGCAGCATGGCCACTA +
Preference number: 4 (lower is better)
Translates to: LVWQVVGRGAGSDHERPWSCQML*PAAWPL
Trigger: TAGTGGCCATGCTGCAGGGCATAGCATCTGGCATGA...CCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp CTGAAAGTGGGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGCCCGTCCTTGCTCCTTaGACCCTGATTGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: LKVGRSSTDSLVWQVVGRPVLAP*TLIGHG
Trigger: CCCATGCCCAATCAGGGTGCAAGGAGCAAGGACGGG...CCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCCCACTTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp CTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGTGCATTGGGCAGTCCTaGTACATGTACAGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: LVWQVVGRGAGSDHERPWCIGQS*YMYRGV
Trigger: GACACCCCTGTACATGTACCAGGACTGCCCAATGCA...CCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp AGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATCGCGGTAGATCCAATTaGAGCGAAGCCAGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: STDSLVWQVVGRGAGSDHRGRSN*SEASGQ
Trigger: CTGACCACTGGCTTCGCTCCAATTGGATCTACCGCG...ATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp AGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATTCTCACAGGTACAGATaGTGGCCCCCTCAGACTCAG +
Preference number: 4 (lower is better)
Translates to: STDSLVWQVVGRGAGSDHSHRYR*WPPQTQ
Trigger: CTGAGTCTGAGGGGGCCACCATCTGTACCTGTGAGA...ATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp AGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTCTGTCAGCAAGACCCTaGGTTCTAGAACCATCTGGT +
Preference number: 4 (lower is better)
Translates to: RLWEGAQGVTMSDLGPVLLSARP*VLEPSG
Trigger: ACCAGATGGTTCTAGAACCCAGGGTCTTGCTGACAG...AAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp GGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTTGCACCCTGATTGGTGCGGGTGGCTAAACTaGCCCATGATAGTTGCCTCT +
Preference number: 4 (lower is better)
Translates to: GSDHERPWPRPCSLHPDWCGWLN*PMIVAS
Trigger: AGAGGCAACTATCATGGGCCAGTTTAGCCACCCGCA...CCAATCAGGGTGCAAGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp AGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGGGATCTTTCCTCCCTaGGTTTCGTATGTGCCATCA +
Preference number: 4 (lower is better)
Translates to: RLWEGAQGVTMSDLGPVLGIFPP*VSYVPS
Trigger: TGATGGCACATACGAAACCCAGGGAGGAAAGATCCC...AAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp AGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTGGCGAAGAGTCATCCTaGGGTCAAAGTTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: SLVWQVVGRGAGSDHERPGEESS*GQSWQW
Trigger: CCATTGCCAACTTTGACCCCAGGATGACTCTTCGCC...AGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp GGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGCGTTTCATGCGTATaGACTCGAGCCACTCAGAGA +
Preference number: 4 (lower is better)
Translates to: GRSSTDSLVWQVVGRGAGSVSCV*TRATQR
Trigger: TCTCTGAGTGGCTCGAGTCCATACGCATGAAACGCT...CCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp AGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATAAGGTTCAAGGCCATTaGCATGCACTGCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: STDSLVWQVVGRGAGSDHKVQGH*HALQVW
Trigger: CCACACCTGCAGTGCATGTCAATGGCCTTGAACCTT...ATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp CTGAAAGTGGGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGCATCGCTGGCTGTGGTaGAGATCCGATGGGCAATGG +
Preference number: 4 (lower is better)
Translates to: LKVGRSSTDSLVWQVVGRHRWLW*RSDGQW
Trigger: CCATTGCCCATCGGATCTTCACCACAGCCAGCGATG...CCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCCCACTTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp GGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGCAGTCCTTGAATCCCTaGATACTGCAAAGAATGCGC +
Preference number: 4 (lower is better)
Translates to: GRSSTDSLVWQVVGRGAGQSLNP*ILQRMR
Trigger: GCGCATTCTTTGCAGTATTCAGGGATTCAAGGACTG...CCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp CTGAAAGTGGGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGCCGTCGGAGCTGAATaGCCACATCCTGGTCACTCT +
Preference number: 4 (lower is better)
Translates to: LKVGRSSTDSLVWQVVGRAVGAE*PHPGHS
Trigger: AGAGTGACCAGGATGTGGGCATTCAGCTCCGACGGC...CCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCCCACTTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp CTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCTGGCCCATGATAGTTaGCTCTCGAAGGAAGTTCCA +
Preference number: 4 (lower is better)
Translates to: LVWQVVGRGAGSDHERPWLAHDS*LSKEVP
Trigger: TGGAACTTCCTTCGAGAGGCAACTATCATGGGCCAG...CCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp AGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATAGAGTGTCTGGGAATTaGGCCAAGCCATTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: STDSLVWQVVGRGAGSDHRVSGN*AKPFRV
Trigger: GACCCTGAATGGCTTGGCCCAATTCCCAGACACTCT...ATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp CTGAAAGTGGGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGTCAGCAGTGCTCTGCTaGGGGCACGTGAGACAATGG +
Preference number: 4 (lower is better)
Translates to: LKVGRSSTDSLVWQVVGRSAVLC*GHVRQW
Trigger: CCATTGTCTCACGTGCCCCCAGCAGAGCACTGCTGA...CCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCCCACTTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp GGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTTGCACCCTGATTGGTACCGTTCTTCATCCTaGTTCAGCACGTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GSDHERPWPRPCSLHPDWYRSSS*FSTCSS
Trigger: TGAGCTGCACGTGCTGAACCAGGATGAAGAACGGTA...CCAATCAGGGTGCAAGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp CTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCTGTCAGCAAGACCCTaGGTTCTAGAACCATCTGGT +
Preference number: 4 (lower is better)
Translates to: LVWQVVGRGAGSDHERPWLSARP*VLEPSG
Trigger: ACCAGATGGTTCTAGAACCCAGGGTCTTGCTGACAG...CCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp AGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATTGGACACTGGTGGGCTaGTCCGAAACTCATGATCAG +
Preference number: 4 (lower is better)
Translates to: STDSLVWQVVGRGAGSDHWTLVG*SETHDQ
Trigger: CTGATCATGAGTTTCGGACCAGCCCACCAGTGTCCA...ATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp AGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATCTGGCCCATGATAGTTaGCTCTCGAAGGAAGTTCCA +
Preference number: 4 (lower is better)
Translates to: STDSLVWQVVGRGAGSDHLAHDS*LSKEVP
Trigger: TGGAACTTCCTTCGAGAGGCAACTATCATGGGCCAG...ATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp CTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCTGGGTTTCGTATGTaGCATCAAAGTCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: LVWQVVGRGAGSDHERPWPGFRM*HQSHPG
Trigger: TCCTGGATGACTTTGATGGCACATACGAAACCCAGG...CCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp AGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGGATGTAGCGTTTCATaGGTATGGACTCGAGCCACT +
Preference number: 4 (lower is better)
Translates to: STDSLVWQVVGRGAGSDHGCSVS*VWTRAT
Trigger: AGTGGCTCGAGTCCATACGCATGAAACGCTACATCC...ATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp AGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATTCTGCGTCCTTGCATTaGGCAGTCCTGGTACATGTA +
Preference number: 4 (lower is better)
Translates to: STDSLVWQVVGRGAGSDHSASLH*AVLVHV
Trigger: TACATGTACCAGGACTGCCCAATGCAAGGACGCAGA...ATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp GGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTTGCACCCTGATTGGGGTTCTAGAACCATCTaGTACCGTTCTTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: GSDHERPWPRPCSLHPDWGSRTI*YRSSSW
Trigger: CCAGGATGAAGAACGGTACCAGATGGTTCTAGAACC...CCAATCAGGGTGCAAGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp CTGAAAGTGGGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGAGGAAGTTCCACCACTaGCCACCTGGGGATGTGTCT +
Preference number: 4 (lower is better)
Translates to: LKVGRSSTDSLVWQVVGRRKFHH*PPGDVS
Trigger: AGACACATCCCCAGGTGGCCAGTGGTGGAACTTCCT...CCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCCCACTTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp CTGAAAGTGGGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGACTCTCCTTCTCCTATaGCAGTGTCCACCATCAGCC +
Preference number: 4 (lower is better)
Translates to: LKVGRSSTDSLVWQVVGRTLLLL*QCPPSA
Trigger: GGCTGATGGTGGACACTGTCATAGGAGAAGGAGAGT...CCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCCCACTTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp AGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTCCATTCAGTATCTGTTaGTGTTCACTCCACCCATCT +
Preference number: 4 (lower is better)
Translates to: SLVWQVVGRGAGSDHERPPFSIC*CSLHPS
Trigger: AGATGGGTGGAGTGAACAGCAACAGATACTGAATGG...AGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp CTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCATTCAGTATCTGTTaGTGTTCACTCCACCCATCT +
Preference number: 4 (lower is better)
Translates to: LVWQVVGRGAGSDHERPWPFSIC*CSLHPS
Trigger: AGATGGGTGGAGTGAACAGCAACAGATACTGAATGG...CCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp CTGAAAGTGGGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGTGCATTGGGCAGTCCTaGTACATGTACAGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: LKVGRSSTDSLVWQVVGRCIGQS*YMYRGV
Trigger: GACACCCCTGTACATGTACCAGGACTGCCCAATGCA...CCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCCCACTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp CTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCTGACACTCCATTTTaGGCTTCCACATTAAAGGTG +
Preference number: 4 (lower is better)
Translates to: LVWQVVGRGAGSDHERPWPDTPF*ASTLKV
Trigger: CACCTTTAATGTGGAAGCCCAAAATGGAGTGTCAGG...CCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp CTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCAAAGTCAGACACCTTaGAGCACAGGTTTTGATTCA +
Preference number: 4 (lower is better)
Translates to: LVWQVVGRGAGSDHERPWQSQTP*STGFDS
Trigger: TGAATCAAAACCTGTGCTGCAAGGTGTCTGACTTTG...CCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp CTGAAAGTGGGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGGATCTTTCCTCCCTaGGTTTCGTATGTGCCATCA +
Preference number: 4 (lower is better)
Translates to: LKVGRSSTDSLVWQVVGRGIFPP*VSYVPS
Trigger: TGATGGCACATACGAAACCCAGGGAGGAAAGATCCC...CCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCCCACTTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp GGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTTGCACCCTGATTGGCATAATTGTGATTACTaGGGTAGTTCATGCCAGATG +
Preference number: 4 (lower is better)
Translates to: GSDHERPWPRPCSLHPDWHNCDY*GSSCQM
Trigger: CATCTGGCATGAACTACCTCAGTAATCACAATTATG...CCAATCAGGGTGCAAGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp AGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATTTGCAGCACAGGTTTTaGTTCACCAAGATGTTTCTG +
Preference number: 4 (lower is better)
Translates to: STDSLVWQVVGRGAGSDHLQHRF*FTKMFL
Trigger: CAGAAACATCTTGGTGAATCAAAACCTGTGCTGCAA...ATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp GTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTCTCCGGGCCGGGACCTaGGACAGTGGCCCGGATGGC +
Preference number: 4 (lower is better)
Translates to: VCIYINPSAPSHDHPFTSLRAGT*DSGPDG
Trigger: GCCATCCGGGCCACTGTCCCAGGTCCCGGCCCGGAG...AGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp AGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATCATAATTGTGATTACTaGGGTAGTTCATGCCAGATG +
Preference number: 4 (lower is better)
Translates to: STDSLVWQVVGRGAGSDHHNCDY*GSSCQM
Trigger: CATCTGGCATGAACTACCTCAGTAATCACAATTATG...ATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp TATATGTGTATGTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCGCCCCCGGCGAGAAGTaGACGCCCACCCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: YMCMYVYILTPQLPPMIIAPGEK*TPTPQG
Trigger: GCCCTGTGGGGTGGGCGTGCACTTCTCGCCGGGGGC...GATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATACATACACATATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp TATATGTGTATGTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCGGTCACGCTGCCTCTaGTGCCTCTGCCGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: YMCMYVYILTPQLPPMIIRSRCL*CLCRWA
Trigger: AGCCCAGCGGCAGAGGCAGCAGAGGCAGCGTGACCG...GATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATACATACACATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACCAACTGCAGCTCCACGTaGACGCGGGAAGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: CIYINPSAPSHDHPFTSTNCSST*TREASS
Trigger: GGAGGAGGCTTCCCGCGTCCACGTGGAGCTGCAGTT...GGTAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACCTGCTGCCTCTGCCGCTaGGCTCTCCTGGACCGGAAA +
Preference number: 4 (lower is better)
Translates to: CIYINPSAPSHDHPFTSTCCLCR*ALLDRK
Trigger: TTTCCGGTCCAGGAGAGCCCAGCGGCAGAGGCAGCA...GGTAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp TATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTATCACGCTGCCTCTGCTaGCTCTGCCGCTGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: YVYILTPQLPPMIILLLLSRCLC*LCRWAL
Trigger: GAGAGCCCAGCGGCAGAGGCAGCAGAGGCAGCGTGA...TAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACCGCCGCTGGGCTCTCCTaGACCGGAAAACGAGAATCC +
Preference number: 4 (lower is better)
Translates to: CIYINPSAPSHDHPFTSTAAGLS*TGKRES
Trigger: GGATTCTCGTTTTCCGGTCCAGGAGAGCCCAGCGGC...GGTAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACCCTGAGCCACTCAGGCTaGGCAGGCGAAGAGTCATCC +
Preference number: 4 (lower is better)
Translates to: CIYINPSAPSHDHPFTSTLSHSG*AGEESS
Trigger: GGATGACTCTTCGCCTGCCCAGCCTGAGTGGCTCAG...GGTAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACCGACCATGAGCGACCTTaGCCCCGTCCTTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: CIYINPSAPSHDHPFTSTDHERP*PRPCSL
Trigger: CAAGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTC...GGTAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp GTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTAAGGGCCGTCGGAGCTaGATGCCCACATCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: VCIYINPSAPSHDHPFTSKGRRS*MPTSWS
Trigger: TGACCAGGATGTGGGCATTCAGCTCCGACGGCCCTT...AGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp TGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACCATATGGGATCCCATCTaGGCCACTCAGGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: CIYINPSAPSHDHPFTSTIWDPI*ATQAGQ
Trigger: CTGCCCAGCCTGAGTGGCTCAGATGGGATCCCATAT...GGTAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp TGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACCGCCCAGCTCTCCCTGTaGCTTGCTTGTGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: CIYINPSAPSHDHPFTSTAQLSL*LACVHQ
Trigger: CTGATGGACACAAGCAAGGCACAGGGAGAGCTGGGC...GGTAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp TATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACCCCGTCCTGTGCTGTaGCCTGACACTGGGAACACC +
Preference number: 4 (lower is better)
Translates to: YVYILTPQLPPMIILLLLPRPVL*PDTGNT
Trigger: GGTGTTCCCAGTGTCAGGGCACAGCACAGGACGGGG...TAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp GTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTGCCATTGACATGCACTaGAGGTGTGGTGAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: VCIYINPSAPSHDHPFTSAIDMH*RCGEPP
Trigger: CGGGGGCTCACCACACCTGCAGTGCATGTCAATGGC...AGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp TGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACCCCCAAGCAGCAAGGCTaGACCAAGCAGCAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: CIYINPSAPSHDHPFTSTPKQQG*TKQQPK
Trigger: TTTGGGCTGCTGCTTGGTGCAGCCTTGCTGCTTGGG...GGTAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACCCACAGGTACAGATGGTaGCCCCCTCAGACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: CIYINPSAPSHDHPFTSTHRYRW*PPQTQQ
Trigger: CTGCTGAGTCTGAGGGGGCCACCATCTGTACCTGTG...GGTAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACAGGCCCCTGGACACTaGTGGGCTGGTCCGAAACTC +
Preference number: 4 (lower is better)
Translates to: YVYILTPQLPPMIILLLLQAPGH*WAGPKL
Trigger: GAGTTTCGGACCAGCCCACCAGTGTCCAGGGGCCTG...TAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp TATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTATCTGCTGGGGGCACGTaGGACAATGGGGTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: YVYILTPQLPPMIILLLLSAGGT*DNGVCP
Trigger: TGGACACACCCCATTGTCTCACGTGCCCCCAGCAGA...TAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp TATATGTGTATGTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCAACGCAGGGAGAGCTaGGTCCCTGAGGCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: YMCMYVYILTPQLPPMIIQRRES*VPEAEK
Trigger: CTTCTCTGCCTCAGGGACTCAGCTCTCCCTGCGTTG...GATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATACATACACATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp TGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACCCTGGTCCGAAACTCATaGTCAGGGGAGAAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: CIYINPSAPSHDHPFTSTLVRNS*SGEKGP
Trigger: TGGCCCTTTCTCCCCTGATCATGAGTTTCGGACCAG...GGTAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp TGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACCTGCTCCAGATGTGCCTaGAGCTTCTGGAAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: CIYINPSAPSHDHPFTSTCSRCA*SFWKCG
Trigger: GCCACACTTCCAGAAGCTTCAGGCACATCTGGAGCA...GGTAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp TGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACCTGCAGGGTCCTCGTATaGCTGGAGGTCCACATAAGG +
Preference number: 4 (lower is better)
Translates to: CIYINPSAPSHDHPFTSTCRVLV*LEVHIR
Trigger: CCTTATGTGGACCTCCAGGCATACGAGGACCCTGCA...GGTAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACCGGTCTGCAGCCACCGTaGTTACCTTCTGGAACAAGG +
Preference number: 4 (lower is better)
Translates to: CIYINPSAPSHDHPFTSTGLQPP*LPSGTR
Trigger: CCTTGTTCCAGAAGGTAACCACGGTGGCTGCAGACC...GGTAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACCTCTCACAGGTACAGATaGTGGCCCCCTCAGACTCAG +
Preference number: 4 (lower is better)
Translates to: CIYINPSAPSHDHPFTSTSHRYR*WPPQTQ
Trigger: CTGAGTCTGAGGGGGCCACCATCTGTACCTGTGAGA...GGTAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp GTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTTGCCTGCAGCCCTCATaGGTGGGATGGAGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: VCIYINPSAPSHDHPFTSCLQPS*VGWRQK
Trigger: TTTCTGCCTCCATCCCACCCATGAGGGCTGCAGGCA...AGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp GTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTTCGGCTTTCGCTTTGTaGCGACGCCTTCCAGATGCA +
Preference number: 4 (lower is better)
Translates to: VCIYINPSAPSHDHPFTSSAFAL*RRLPDA
Trigger: TGCATCTGGAAGGCGTCGTCACAAAGCGAAAGCCGA...AGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp TATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTAATATGGGATCCCATCTaGGCCACTCAGGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: YVYILTPQLPPMIILLLLIWDPI*ATQAGQ
Trigger: CTGCCCAGCCTGAGTGGCTCAGATGGGATCCCATAT...TAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp TATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTAAGGGCAGGCAACACATaGTTCGCCACTGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: YVYILTPQLPPMIILLLLRAGNT*FATATF
Trigger: GAAGGTGGCAGTGGCGAAGCATGTGTTGCCTGCCCT...TAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp TATATGTGTATGTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCAGGGCAGGCAACACATaGTTCGCCACTGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: YMCMYVYILTPQLPPMIIRAGNT*FATATF
Trigger: GAAGGTGGCAGTGGCGAAGCATGTGTTGCCTGCCCT...GATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATACATACACATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp TATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTAGACTCAGCAGTGCTCTaGTGGGGGCACGTGAGACAA +
Preference number: 4 (lower is better)
Translates to: YVYILTPQLPPMIILLLLDSAVL*WGHVRQ
Trigger: TTGTCTCACGTGCCCCCAGCAGAGCACTGCTGAGTC...TAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp TGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACCGACAGTGACTCTGCATaGCCCATGCTGATGCTGACT +
Preference number: 4 (lower is better)
Translates to: CIYINPSAPSHDHPFTSTDSDSA*PMLMLT
Trigger: AGTCAGCATCAGCATGGGGCATGCAGAGTCACTGTC...GGTAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp TGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACCACGACGCCTTCCAGATaGAGAATATGCGGGTGGCTA +
Preference number: 4 (lower is better)
Translates to: CIYINPSAPSHDHPFTSTTTPSR*RICGWL
Trigger: TAGCCACCCGCATATTCTGCATCTGGAAGGCGTCGT...GGTAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp TATATGTGTATGTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCAGAATGCGCTTCTGGTaGCCGGGCAGTGTGATTCCC +
Preference number: 4 (lower is better)
Translates to: YMCMYVYILTPQLPPMIIRMRFW*PGSVIP
Trigger: GGGAATCACACTGCCCGGGCACCAGAAGCGCATTCT...GATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATACATACACATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp GTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTTTGGAGCGAAGCCAGTaGTCAGTGTCTCTGCGTCCT +
Preference number: 4 (lower is better)
Translates to: VCIYINPSAPSHDHPFTSLERSQ*SVSLRP
Trigger: AGGACGCAGAGACACTGACCACTGGCTTCGCTCCAA...AGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp GTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTCGCGGTAGATCCAATTaGAGCGAAGCCAGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: VCIYINPSAPSHDHPFTSRGRSN*SEASGQ
Trigger: CTGACCACTGGCTTCGCTCCAATTGGATCTACCGCG...AGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp GTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTCGAATGGTGAAGCTCTaGTCTGCAGCCACCGTGGTT +
Preference number: 4 (lower is better)
Translates to: VCIYINPSAPSHDHPFTSRMVKL*SAATVV
Trigger: AACCACGGTGGCTGCAGACCAGAGCTTCACCATTCG...AGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACCTGGACACTGGTGGGCTaGTCCGAAACTCATGATCAG +
Preference number: 4 (lower is better)
Translates to: CIYINPSAPSHDHPFTSTWTLVG*SETHDQ
Trigger: CTGATCATGAGTTTCGGACCAGCCCACCAGTGTCCA...GGTAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp GTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTCACCATCAGCCACGCTaGATCAAGCTCCCGGGTAAA +
Preference number: 4 (lower is better)
Translates to: VCIYINPSAPSHDHPFTSHHQPR*IKLPGK
Trigger: TTTACCCGGGAGCTTGATCCAGCGTGGCTGATGGTG...AGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TATATGTGTATGTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCAAGCTTCTGGAAGTGTaGCCGGCGGGCACGGTCATA +
Preference number: 4 (lower is better)
Translates to: YMCMYVYILTPQLPPMIIKLLEV*PAGTVI
Trigger: TATGACCGTGCCCGCCGGCCACACTTCCAGAAGCTT...GATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATACATACACATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTATCCTTGCACCCTGATTaGGCATGGGGTGAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: YVYILTPQLPPMIILLLLSLHPD*AWGERR
Trigger: CCTCCTCTCACCCCATGCCCAATCAGGGTGCAAGGA...TAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TATATGTGTATGTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCACCGATAGCCTAGTCTaGCAGGTTGTGGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: YMCMYVYILTPQLPPMIITDSLV*QVVGRG
Trigger: GCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGT...GATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATACATACACATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TATATGTGTATGTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCTGCCTGCAGCCCTCATaGGTGGGATGGAGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: YMCMYVYILTPQLPPMIICLQPS*VGWRQK
Trigger: TTTCTGCCTCCATCCCACCCATGAGGGCTGCAGGCA...GATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATACATACACATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp GTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTAAGGTTCAAGGCCATTaGCATGCACTGCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: VCIYINPSAPSHDHPFTSKVQGH*HALQVW
Trigger: CCACACCTGCAGTGCATGTCAATGGCCTTGAACCTT...AGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp TATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACTGGTCCGAAACTCATaGTCAGGGGAGAAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: YVYILTPQLPPMIILLLLLVRNS*SGEKGP
Trigger: TGGCCCTTTCTCCCCTGATCATGAGTTTCGGACCAG...TAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp TATATGTGTATGTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCGCAGCAGCCCAAAGATaGCGGCTACAATCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: YMCMYVYILTPQLPPMIIAAAQR*RLQSLL
Trigger: GAGGAGAGATTGTAGCCGTCATCTTTGGGCTGCTGC...GATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATACATACACATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp TATATGTGTATGTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCTCGGCTTTCGCTTTGTaGCGACGCCTTCCAGATGCA +
Preference number: 4 (lower is better)
Translates to: YMCMYVYILTPQLPPMIISAFAL*RRLPDA
Trigger: TGCATCTGGAAGGCGTCGTCACAAAGCGAAAGCCGA...GATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATACATACACATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp TATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTATGCTCCAGATGTGCCTaGAGCTTCTGGAAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: YVYILTPQLPPMIILLLLCSRCA*SFWKCG
Trigger: GCCACACTTCCAGAAGCTTCAGGCACATCTGGAGCA...TAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp TATATGTGTATGTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCAGAGCAGGGTTCTCCTaGAAGTGGGCAGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: YMCMYVYILTPQLPPMIIRAGFS*KWAEAA
Trigger: TGCTGCTTCTGCCCACTTTCAGGAGAACCCTGCTCT...GATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATACATACACATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp GTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTTATGTGGTGTCAGGCTaGAGCTCTGTCAGCAAGACC +
Preference number: 4 (lower is better)
Translates to: VCIYINPSAPSHDHPFTSYVVSG*SSVSKT
Trigger: GGTCTTGCTGACAGAGCTGCAGCCTGACACCACATA...AGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp GTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTTCCAGATGCAGAATATaGGGGTGGCTAAACTGGCCC +
Preference number: 4 (lower is better)
Translates to: VCIYINPSAPSHDHPFTSSRCRI*GWLNWP
Trigger: GGGCCAGTTTAGCCACCCGCATATTCTGCATCTGGA...AGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp TATATGTGTATGTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCGCGGGCACGGTCATATaGCCAGCAGTTCTTCATGAG +
Preference number: 4 (lower is better)
Translates to: YMCMYVYILTPQLPPMIIAGTVI*PAVLHE
Trigger: CTCATGAAGAACTGCTGGGCATATGACCGTGCCCGC...GATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATACATACACATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp TGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACCGGATGTAGCGTTTCATaGGTATGGACTCGAGCCACT +
Preference number: 4 (lower is better)
Translates to: CIYINPSAPSHDHPFTSTGCSVS*VWTRAT
Trigger: AGTGGCTCGAGTCCATACGCATGAAACGCTACATCC...GGTAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp GTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTGAATACTGCAAAGAATaGGCTTCTGGTGCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: VCIYINPSAPSHDHPFTSEYCKE*ASGARA
Trigger: TGCCCGGGCACCAGAAGCGCATTCTTTGCAGTATTC...AGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACGAATGGTGAAGCTCTaGTCTGCAGCCACCGTGGTT +
Preference number: 4 (lower is better)
Translates to: YVYILTPQLPPMIILLLLRMVKL*SAATVV
Trigger: AACCACGGTGGCTGCAGACCAGAGCTTCACCATTCG...TAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TATATGTGTATGTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCAGGAAGTTCCACCACTaGCCACCTGGGGATGTGTCT +
Preference number: 4 (lower is better)
Translates to: YMCMYVYILTPQLPPMIIRKFHH*PPGDVS
Trigger: AGACACATCCCCAGGTGGCCAGTGGTGGAACTTCCT...GATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATACATACACATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TATATGTGTATGTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCAGATCCGATGGGCAATaGCTTCAGGGGCTGTCCAAC +
Preference number: 4 (lower is better)
Translates to: YMCMYVYILTPQLPPMIIRSDGQ*LQGLSN
Trigger: GTTGGACAGCCCCTGAAGCCATTGCCCATCGGATCT...GATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATACATACACATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp GTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTCAAAGAATGCGCTTCTaGTGCCCGGGCAGTGTGATT +
Preference number: 4 (lower is better)
Translates to: VCIYINPSAPSHDHPFTSQRMRF*CPGSVI
Trigger: AATCACACTGCCCGGGCACCAGAAGCGCATTCTTTG...AGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp TATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTATCAAGGCCATTGACATaGACTGCAGGTGTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: YVYILTPQLPPMIILLLLSRPLT*TAGVVS
Trigger: GCTCACCACACCTGCAGTGCATGTCAATGGCCTTGA...TAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp TATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTAACGACGCCTTCCAGATaGAGAATATGCGGGTGGCTA +
Preference number: 4 (lower is better)
Translates to: YVYILTPQLPPMIILLLLTTPSR*RICGWL
Trigger: TAGCCACCCGCATATTCTGCATCTGGAAGGCGTCGT...TAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACCTGCAGAATATGCGGGTaGCTAAACTGGCCCATGATA +
Preference number: 4 (lower is better)
Translates to: CIYINPSAPSHDHPFTSTCRICG*LNWPMI
Trigger: TATCATGGGCCAGTTTAGCCACCCGCATATTCTGCA...GGTAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACCAACAAAGAGGTTTTCTaGGGTGCAGAGCAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: CIYINPSAPSHDHPFTSTNKEVF*GAEQGS
Trigger: AGAACCCTGCTCTGCACCCCAGAAAACCTCTTTGTT...GGTAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTATCTGCGTCCTTGCATTaGGCAGTCCTGGTACATGTA +
Preference number: 4 (lower is better)
Translates to: YVYILTPQLPPMIILLLLSASLH*AVLVHV
Trigger: TACATGTACCAGGACTGCCCAATGCAAGGACGCAGA...TAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTAAGCGTTTCATGCGTATaGACTCGAGCCACTCAGAGA +
Preference number: 4 (lower is better)
Translates to: YVYILTPQLPPMIILLLLSVSCV*TRATQR
Trigger: TCTCTGAGTGGCTCGAGTCCATACGCATGAAACGCT...TAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp TATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACAGTCCTTGAATCCCTaGATACTGCAAAGAATGCGC +
Preference number: 4 (lower is better)
Translates to: YVYILTPQLPPMIILLLLQSLNP*ILQRMR
Trigger: GCGCATTCTTTGCAGTATTCAGGGATTCAAGGACTG...TAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp TATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTAGGAGGGATCAGTCCTTaGATCCCTGAATACTGCAAA +
Preference number: 4 (lower is better)
Translates to: YVYILTPQLPPMIILLLLGGISP*IPEYCK
Trigger: TTTGCAGTATTCAGGGATTCAAGGACTGATCCCTCC...TAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp TATATGTGTATGTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTCAGCTCCCTCCCATaGTCATCCTTTTACTTCTAC +
Preference number: 4 (lower is better)
Translates to: YMCMYVYILTPQLPPMIILSSLP*SSFYFY
Trigger: GTAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAG...GATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATACATACACATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp TATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACCTGGGTTTCGTATGTaGCATCAAAGTCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: YVYILTPQLPPMIILLLLPGFRM*HQSHPG
Trigger: TCCTGGATGACTTTGATGGCACATACGAAACCCAGG...TAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTAGGTTCTAGAACCATCTaGTACCGTTCTTCATCCTGG +
Preference number: 4 (lower is better)
Translates to: YVYILTPQLPPMIILLLLGSRTI*YRSSSW
Trigger: CCAGGATGAAGAACGGTACCAGATGGTTCTAGAACC...TAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTATGCAGAATATGCGGGTaGCTAAACTGGCCCATGATA +
Preference number: 4 (lower is better)
Translates to: YVYILTPQLPPMIILLLLCRICG*LNWPMI
Trigger: TATCATGGGCCAGTTTAGCCACCCGCATATTCTGCA...TAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR TCA 90 bp GTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTTTGCAGCACAGGTTTTaGTTCACCAAGATGTTTCTG +
Preference number: 4 (lower is better)
Translates to: VCIYINPSAPSHDHPFTSLQHRF*FTKMFL
Trigger: CAGAAACATCTTGGTGAATCAAAACCTGTGCTGCAA...AGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR GCA 90 bp GTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTCAAAGTCAGACACCTTaGAGCACAGGTTTTGATTCA +
Preference number: 4 (lower is better)
Translates to: VCIYINPSAPSHDHPFTSQSQTP*STGFDS
Trigger: TGAATCAAAACCTGTGCTGCAAGGTGTCTGACTTTG...AGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CCA 90 bp TATATGTGTATGTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCCTGACACTCCATTTTaGGCTTCCACATTAAAGGTG +
Preference number: 4 (lower is better)
Translates to: YMCMYVYILTPQLPPMIIPDTPF*ASTLKV
Trigger: CACCTTTAATGTGGAAGCCCAAAATGGAGTGTCAGG...GATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATACATACACATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CAA 90 bp GGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGATCAGAGTAACTTCCTaGGCGCGCGCCCCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: GRSSTDSLVWQVVGRGAGIRVTS*ARAPGG
Trigger: GCCCCCGGGGGCGCGCGCCAAGGAAGTTACTCTGAT...CCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CAA 90 bp CTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGATCAGAGTAACTTCCTaGGCGCGCGCCCCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: LVWQVVGRGAGSDHERPWIRVTS*ARAPGG
Trigger: GCCCCCGGGGGCGCGCGCCAAGGAAGTTACTCTGAT...CCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CAA 90 bp GGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCACTCCACCCATCTTTaGGGGGATCCAGCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: GRLWEGAQGVTMSDLGPVHSTHL*GDPAAS
Trigger: GCTGGCTGCTGGATCCCCCAAAAGATGGGTGGAGTG...GACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS CCA 90 bp GGTCCCCGCCACTTCCACCAACCCAGCGGGGCCAGGCAGAGTGTCTaGGAATTGGGCCAAGCCATTCAGGGTCTCAGGACAGCGCTGGTA +
Preference number: 5 (lower is better)
Translates to: GPRHFHQPSGARQSV*ELGQAIQGLRTALV
Trigger: TACCAGCGCTGTCCTGAGACCCTGAATGGCTTGGCCCAATTCCCAGACACTCTGCCTGGCCCCGCTGGGTTGGTGGAAGTGGCGGGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS-3UTR CAA 90 bp GGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGCCCCCAGGGAAACTCTaGCAGTCCCGCACGGTGAAC +
Preference number: 5 (lower is better)
Translates to: GRSSTDSLVWQVVGRGAGPPGKL*QSRTVN
Trigger: GTTCACCGTGCGGGACTGCAAGAGTTTCCCTGGGGG...CCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CAA 90 bp AGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTCCCCGTCCTTGCTCCTaGCACCCTGATTGGGCATGG +
Preference number: 5 (lower is better)
Translates to: RLWEGAQGVTMSDLGPVLPRPCS*HPDWAW
Trigger: CCATGCCCAATCAGGGTGCAAGGAGCAAGGACGGGG...AAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS TCA 90 bp GGAAGTGTGGCCGGCGGGCACGGTCATATGCCCAGCAGTTCTTCATaGGCTCATACAGAGGGGCAGGGCAGTCCACAGGAGGGGGCAACC +
Preference number: 5 (lower is better)
Translates to: GSVAGGHGHMPSSSS*AHTEGQGSPQEGAT
Trigger: GGTTGCCCCCTCCTGTGGACTGCCCTGCCCCTCTGTATGAGCTCATGAAGAACTGCTGGGCATATGACCGTGCCCGCCGGCCACACTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS TCA 90 bp GTCCGCAGGGAGTGGGGGTTGGCAAGCAGTTGCTCCAGATGTGCCTaGAGCTTCTGGAAGTGTGGCCGGCGGGCACGGTCATATGCCCAG +
Preference number: 5 (lower is better)
Translates to: VRREWGLASSCSRCA*SFWKCGRRARSYAQ
Trigger: CTGGGCATATGACCGTGCCCGCCGGCCACACTTCCAGAAGCTTCAGGCACATCTGGAGCAACTGCTTGCCAACCCCCACTCCCTGCGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS GCA 90 bp AGCTTGTCCTCTCGATCCACATCGGTGGCGCGGTCACGCTGCCTCTaGTGCCTCTGCCGCTGGGCTCTCCTGGACCGGAAAACGAGAATC +
Preference number: 5 (lower is better)
Translates to: SLSSRSTSVARSRCL*CLCRWALLDRKTRI
Trigger: GATTCTCGTTTTCCGGTCCAGGAGAGCCCAGCGGCAGAGGCAGCAGAGGCAGCGTGACCGCGCCACCGATGTGGATCGAGAGGACAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS CCA 90 bp GCTCCACGTGGACGCGGGAAGCCTCCTCCCCGCGGTAGATCCAATTaGAGCGAAGCCAGTGGTCAGTGTCTCTGCGTCCTTGCATTGGGC +
Preference number: 5 (lower is better)
Translates to: APRGRGKPPPRGRSN*SEASGQCLCVLALG
Trigger: GCCCAATGCAAGGACGCAGAGACACTGACCACTGGCTTCGCTCCAATTGGATCTACCGCGGGGAGGAGGCTTCCCGCGTCCACGTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000497891.1
ENST00000644029.1
ENST00000645847.2
ENST00000647400.1
CDS-3UTR CAA 90 bp TGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTGGGGTTGGCAAGCAGTaGCTCCAGATGTGCCTGAAG +
Preference number: 5 (lower is better)
Translates to: WEGAQGVTMSDLGPVLAPGVGKQ*LQMCLK
Trigger: CTTCAGGCACATCTGGAGCAACTGCTTGCCAACCCC...AGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CAA 90 bp CTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCGCAGGGAGTGGGGGTaGGCAAGCAGTTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: LVWQVVGRGAGSDHERPWRREWG*ASSCSR
Trigger: TCTGGAGCAACTGCTTGCCAACCCCCACTCCCTGCG...CCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS GCA 90 bp CCACCCATCTTTTGGGGGATCCAGCAGCCAGCCCAGCTCTCCCTGTaGCTTGCTTGTGTCCATCAGAGTAACTTCCTTGGCGCGCGCCCC +
Preference number: 5 (lower is better)
Translates to: PPIFWGIQQPAQLSL*LACVHQSNFLGARP
Trigger: GGGGCGCGCGCCAAGGAAGTTACTCTGATGGACACAAGCAAGGCACAGGGAGAGCTGGGCTGGCTGCTGGATCCCCCAAAAGATGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS-3UTR CAA 90 bp GGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCTCCATGTACAGAAGGTaGAAGGTCTCCTTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: GRLWEGAQGVTMSDLGPVSMYRR*KVSLQP
Trigger: GGGCTGCAAGGAGACCTTCAACCTTCTGTACATGGA...GACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CAA 90 bp AGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATCGCAGGGAGTGGGGGTaGGCAAGCAGTTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: STDSLVWQVVGRGAGSDHRREWG*ASSCSR
Trigger: TCTGGAGCAACTGCTTGCCAACCCCCACTCCCTGCG...ATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CAA 90 bp GGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGATCCTGGGGTCAAAGTaGGCAATGGTCCGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: GRSSTDSLVWQVVGRGAGILGSK*AMVRRE
Trigger: CTCCCTGCGGACCATTGCCAACTTTGACCCCAGGAT...CCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS GCA 90 bp CAGCCACGCTGGATCAAGCTCCCGGGTAAAGTCCAGGGCTCCCTGTaGAGGGTCCTCGTATGCCTGGAGGTCCACATAAGGCTTCAGCCA +
Preference number: 5 (lower is better)
Translates to: QPRWIKLPGKVQGSL*RVLVCLEVHIRLQP
Trigger: TGGCTGAAGCCTTATGTGGACCTCCAGGCATACGAGGACCCTGCACAGGGAGCCCTGGACTTTACCCGGGAGCTTGATCCAGCGTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000494989.1
ENST00000645510.1
ENST00000645847.2
ENST00000647400.1
CDS GCA 90 bp AATGGTCCGCAGGGAGTGGGGGTTGGCAAGCAGTTGCTCCAGATGTaGCTGAAGCTTCTGGAAGTGTGGCCGGCGGGCACGGTCATATGC +
Preference number: 5 (lower is better)
Translates to: NGPQGVGVGKQLLQM*LKLLEVWPAGTVIC
Trigger: GCATATGACCGTGCCCGCCGGCCACACTTCCAGAAGCTTCAGGCACATCTGGAGCAACTGCTTGCCAACCCCCACTCCCTGCGGACCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS CCA 90 bp TGGCACCCAATAAGGAGCCACCAGGGATCTGCACCAGGACCCAGATaGCATGGAGGGAAGCAGCACCTTCTGGAACAAGGGCCGTCGGAG +
Preference number: 5 (lower is better)
Translates to: WHPIRSHQGSAPGPR*HGGKQHLLEQGPSE
Trigger: CTCCGACGGCCCTTGTTCCAGAAGGTGCTGCTTCCCTCCATGCCATCTGGGTCCTGGTGCAGATCCCTGGTGGCTCCTTATTGGGTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497891.1
ENST00000644029.1
CDS-3UTR CAA 90 bp AGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTCTCTGCGTCCTTGCATaGGGCAGTCCTGGTACATGT +
Preference number: 5 (lower is better)
Translates to: RLWEGAQGVTMSDLGPVLLCVLA*GSPGTC
Trigger: ACATGTACCAGGACTGCCCAATGCAAGGACGCAGAG...AAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CAA 90 bp AGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTGGGGTTGGCAAGCAGTaGCTCCAGATGTGCCTGAAG +
Preference number: 5 (lower is better)
Translates to: SLVWQVVGRGAGSDHERPGVGKQ*LQMCLK
Trigger: CTTCAGGCACATCTGGAGCAACTGCTTGCCAACCCC...AGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS TCA 90 bp CAGGGGAGAAAGGGCCAGGACCCAGTGGGGTCAGCATTCGGACTCTaGCGATGTATGTGGTGTCAGGCTGCAGCTCTGTCAGCAAGACCC +
Preference number: 5 (lower is better)
Translates to: QGRKGQDPVGSAFGL*RCMWCQAAALSARP
Trigger: GGGTCTTGCTGACAGAGCTGCAGCCTGACACCACATACATCGTCAGAGTCCGAATGCTGACCCCACTGGGTCCTGGCCCTTTCTCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000275815.4
ENST00000479459.1
ENST00000488068.5
ENST00000645847.2
ENST00000646228.1
ENST00000647400.1
CDS GCA 90 bp AAGCTCCCGGGTAAAGTCCAGGGCTCCCTGTGCAGGGTCCTCGTATaGCTGGAGGTCCACATAAGGCTTCAGCCACAGCTTGTCCTCTCG +
Preference number: 5 (lower is better)
Translates to: KLPGKVQGSLCRVLV*LEVHIRLQPQLVLS
Trigger: CGAGAGGACAAGCTGTGGCTGAAGCCTTATGTGGACCTCCAGGCATACGAGGACCCTGCACAGGGAGCCCTGGACTTTACCCGGGAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS GCA 90 bp CTGCAAAGAATGCGCTTCTGGTGCCCGGGCAGTGTGATTCCCATCTaGGTCAGGTCCTCAGCGGTCAGCTCCAGCACACACTCCATGGTG +
Preference number: 5 (lower is better)
Translates to: LQRMRFWCPGSVIPI*VRSSAVSSSTHSMV
Trigger: CACCATGGAGTGTGTGCTGGAGCTGACCGCTGAGGACCTGACGCAGATGGGAATCACACTGCCCGGGCACCAGAAGCGCATTCTTTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS CCA 90 bp CCATCTGCGTCAGGTCCTCAGCGGTCAGCTCCAGCACACACTCCATaGTGTCCAGCCCAGCCGAGTGGAAGTGCAGGATGTAGCGTTTCA +
Preference number: 5 (lower is better)
Translates to: PSASGPQRSAPAHTP*CPAQPSGSAGCSVS
Trigger: TGAAACGCTACATCCTGCACTTCCACTCGGCTGGGCTGGACACCATGGAGTGTGTGCTGGAGCTGACCGCTGAGGACCTGACGCAGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS-3UTR CAA 90 bp GGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTTGCACCCTGATTGGAGTGTCTCTGCGTCCTaGCATTGGGCAGTCCTGGTA +
Preference number: 5 (lower is better)
Translates to: GSDHERPWPRPCSLHPDWSVSAS*HWAVLV
Trigger: TACCAGGACTGCCCAATGCAAGGACGCAGAGACACT...CCAATCAGGGTGCAAGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CAA 90 bp AGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTCAGAGTGTCTGGGAATaGGGCCAAGCCATTCAGGGT +
Preference number: 5 (lower is better)
Translates to: SLVWQVVGRGAGSDHERPQSVWE*GQAIQG
Trigger: ACCCTGAATGGCTTGGCCCAATTCCCAGACACTCTG...AGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS TCA 90 bp CGAGAATCCCAAGCAGCAAGGCTGCACCAAGCAGCAGCCCAAAGATaGCGGCTACAATCTCTCCTCCAGTCAGGCCCCTGGACACTGGTG +
Preference number: 5 (lower is better)
Translates to: RESQAARLHQAAAQR*RLQSLLQSGPWTLV
Trigger: CACCAGTGTCCAGGGGCCTGACTGGAGGAGAGATTGTAGCCGTCATCTTTGGGCTGCTGCTTGGTGCAGCCTTGCTGCTTGGGATTCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000275815.4
ENST00000479459.1
ENST00000488068.5
ENST00000645847.2
ENST00000646228.1
ENST00000647400.1
CDS CCA 90 bp CCCAAACTCTCCTTCTCCTATGACAGTGTCCACCATCAGCCACGCTaGATCAAGCTCCCGGGTAAAGTCCAGGGCTCCCTGTGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: PKLSFSYDSVHHQPR*IKLPGKVQGSLCRV
Trigger: GACCCTGCACAGGGAGCCCTGGACTTTACCCGGGAGCTTGATCCAGCGTGGCTGATGGTGGACACTGTCATAGGAGAAGGAGAGTTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000494989.1
ENST00000645510.1
ENST00000645847.2
ENST00000647400.1
CDS-3UTR CAA 90 bp AGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTAGCTCTCCCTGTGCCTaGCTTGTGTCCATCAGAGTA +
Preference number: 5 (lower is better)
Translates to: SLVWQVVGRGAGSDHERPSSPCA*LVSIRV
Trigger: TACTCTGATGGACACAAGCAAGGCACAGGGAGAGCT...AGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS TCA 90 bp ATCCCTGAATACTGCAAAGAATGCGCTTCTGGTGCCCGGGCAGTGTaGTTCCCATCTGCGTCAGGTCCTCAGCGGTCAGCTCCAGCACAC +
Preference number: 5 (lower is better)
Translates to: IPEYCKECASGARAV*FPSASGPQRSAPAH
Trigger: GTGTGCTGGAGCTGACCGCTGAGGACCTGACGCAGATGGGAATCACACTGCCCGGGCACCAGAAGCGCATTCTTTGCAGTATTCAGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS GCA 90 bp CTGGGCTCTCCTGGACCGGAAAACGAGAATCCCAAGCAGCAAGGCTaGACCAAGCAGCAGCCCAAAGATGACGGCTACAATCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LGSPGPENENPKQQG*TKQQPKDDGYNLSS
Trigger: GGAGGAGAGATTGTAGCCGTCATCTTTGGGCTGCTGCTTGGTGCAGCCTTGCTGCTTGGGATTCTCGTTTTCCGGTCCAGGAGAGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS GCA 90 bp GAGCTGGCACCTGGACCGGAAAACGAGAATCCCAAGCAGCAAGGCTaGACCAAGCAGCAGCCCAAAGATGACGGCTACAATCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: ELAPGPENENPKQQG*TKQQPKDDGYNLSS
Trigger: GGAGGAGAGATTGTAGCCGTCATCTTTGGGCTGCTGCTTGGTGCAGCCTTGCTGCTTGGGATTCTCGTTTTCCGGTCCAGGTGCCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479459.1
ENST00000646228.1
CDS GCA 90 bp TCTCTGCAACCTTCTCTGGCACCCAATAAGGAGCCACCAGGGATCTaGACCAGGACCCAGATGGCATGGAGGGAAGCAGCACCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: SLQPSLAPNKEPPGI*TRTQMAWREAAPSG
Trigger: TCCAGAAGGTGCTGCTTCCCTCCATGCCATCTGGGTCCTGGTGCAGATCCCTGGTGGCTCCTTATTGGGTGCCAGAGAAGGTTGCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497891.1
ENST00000644029.1
CDS GCA 90 bp AAGCTCCCGGGTAAAGTCCAGGGCTCCCTGTGCAGGGTCCTCGTATaGCTGGAGGTCCACATAAGGCTTCAGCCACAGCTTGTCCTCTAT +
Preference number: 5 (lower is better)
Translates to: KLPGKVQGSLCRVLV*LEVHIRLQPQLVLY
Trigger: ATAGAGGACAAGCTGTGGCTGAAGCCTTATGTGGACCTCCAGGCATACGAGGACCCTGCACAGGGAGCCCTGGACTTTACCCGGGAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494989.1
ENST00000645510.1
CDS CCA 90 bp TTCAGCTTCACGGAGCCAGACACAAGGTCTCGAATGGTGAAGCTCTaGTCTGCAGCCACCGTGGTTACCTTCTGGAACAAGGGCCGTCGG +
Preference number: 5 (lower is better)
Translates to: FSFTEPDTRSRMVKL*SAATVVTFWNKGRR
Trigger: CCGACGGCCCTTGTTCCAGAAGGTAACCACGGTGGCTGCAGACCAGAGCTTCACCATTCGAGACCTTGTGTCTGGCTCCGTGAAGCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS CCA 90 bp GCTGGTCCGAAACTCATGATCAGGGGAGAAAGGGCCAGGACCCAGTaGGGTCAGCATTCGGACTCTGACGATGTATGTGGTGTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: AGPKLMIRGERARTQ*GQHSDSDDVCGVRL
Trigger: CAGCCTGACACCACATACATCGTCAGAGTCCGAATGCTGACCCCACTGGGTCCTGGCCCTTTCTCCCCTGATCATGAGTTTCGGACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000275815.4
ENST00000479459.1
ENST00000488068.5
ENST00000645847.2
ENST00000646228.1
ENST00000647400.1
CDS CCA 90 bp GTTGGCAAGCAGTTGCTCCAGATGTGCCTGAAGCTTCTGGAAGTGTaGCCGGCGGGCACGGTCATATGCCCAGCAGTTCTTCATGAGCTC +
Preference number: 5 (lower is better)
Translates to: VGKQLLQMCLKLLEV*PAGTVICPAVLHEL
Trigger: GAGCTCATGAAGAACTGCTGGGCATATGACCGTGCCCGCCGGCCACACTTCCAGAAGCTTCAGGCACATCTGGAGCAACTGCTTGCCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS-3UTR CAA 90 bp AGCCTAGTCTGGCAGGTTGTGGGAAGGGGCGCAGGGAGTGACCATGAGCGACCTCCCATTCAGTATCTGTaGCTGTTCACTCCACCCATC +
Preference number: 5 (lower is better)
Translates to: SLVWQVVGRGAGSDHERPPIQYL*LFTPPI
Trigger: GATGGGTGGAGTGAACAGCAACAGATACTGAATGGG...AGGTCGCTCATGGTCACTCCCTGCGCCCCTTCCCACAACCTGCCAGACTAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CAA 90 bp CTGAAAGTGGGCAGAAGCAGCACCGATAGCCTAGTCTGGCAGGTTGTGGGAAGGATCCTGGGGTCAAAGTaGGCAATGGTCCGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: LKVGRSSTDSLVWQVVGRILGSK*AMVRRE
Trigger: CTCCCTGCGGACCATTGCCAACTTTGACCCCAGGAT...CCTTCCCACAACCTGCCAGACTAGGCTATCGGTGCTGCTTCTGCCCACTTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS TCA 90 bp TATGGACTCGAGCCACTCAGAGACGGTTCGATATGGGATCCCATCTaGGCCACTCAGGCTGGGCAGGCGAAGAGTCATCCTGGGGTCAAA +
Preference number: 5 (lower is better)
Translates to: YGLEPLRDGSIWDPI*ATQAGQAKSHPGVK
Trigger: TTTGACCCCAGGATGACTCTTCGCCTGCCCAGCCTGAGTGGCTCAGATGGGATCCCATATCGAACCGTCTCTGAGTGGCTCGAGTCCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS TCA 90 bp GGCATGGAGGGAAGCAGCACCTTCTGGAACAAGGGCCGTCGGAGCTaGATGCCCACATCCTGGTCACTCTCCATGTACAGAAGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: GMEGSSTFWNKGRRS*MPTSWSLSMYRRLK
Trigger: CTTCAACCTTCTGTACATGGAGAGTGACCAGGATGTGGGCATTCAGCTCCGACGGCCCTTGTTCCAGAAGGTGCTGCTTCCCTCCATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497891.1
ENST00000644029.1
CDS GCA 90 bp TGGTGTCCAGCCCAGCCGAGTGGAAGTGCAGGATGTAGCGTTTCATaGGTATGGACTCGAGCCACTCAGAGACGGTTCGATATGGGATCC +
Preference number: 5 (lower is better)
Translates to: WCPAQPSGSAGCSVS*VWTRATQRRFDMGS
Trigger: GGATCCCATATCGAACCGTCTCTGAGTGGCTCGAGTCCATACGCATGAAACGCTACATCCTGCACTTCCACTCGGCTGGGCTGGACACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS CCA 90 bp TCATCCTGGGGTCAAAGTTGGCAATGGTCCGCAGGGAGTGGGGGTTaGCAAGCAGTTGCTCCAGATGTGCCTGAAGCTTCTGGAAGTGTG +
Preference number: 5 (lower is better)
Translates to: SSWGQSWQWSAGSGG*QAVAPDVPEASGSV
Trigger: CACACTTCCAGAAGCTTCAGGCACATCTGGAGCAACTGCTTGCCAACCCCCACTCCCTGCGGACCATTGCCAACTTTGACCCCAGGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS CCA 90 bp CCAGCCCAGCCGAGTGGAAGTGCAGGATGTAGCGTTTCATGCGTATaGACTCGAGCCACTCAGAGACGGTTCGATATGGGATCCCATCTG +
Preference number: 5 (lower is better)
Translates to: PAQPSGSAGCSVSCV*TRATQRRFDMGSHL
Trigger: CAGATGGGATCCCATATCGAACCGTCTCTGAGTGGCTCGAGTCCATACGCATGAAACGCTACATCCTGCACTTCCACTCGGCTGGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS TCA 90 bp TCTGCAGCCACCGTGGTTACCTTCTGGAACAAGGGCCGTCGGAGCTaGATGCCCACATCCTGGTCACTCTCCATGTACAGAAGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: SAATVVTFWNKGRRS*MPTSWSLSMYRRLK
Trigger: CTTCAACCTTCTGTACATGGAGAGTGACCAGGATGTGGGCATTCAGCTCCGACGGCCCTTGTTCCAGAAGGTAACCACGGTGGCTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS TCA 90 bp GCTCCACATTCAGCTTCACGGAGCCAGACACAAGGTCTCGAATGGTaGAGCTCTGGTCTGCAGCCACCGTGGTTACCTTCTGGAACAAGG +
Preference number: 5 (lower is better)
Translates to: APHSASRSQTQGLEW*SSGLQPPWLPSGTR
Trigger: CCTTGTTCCAGAAGGTAACCACGGTGGCTGCAGACCAGAGCTTCACCATTCGAGACCTTGTGTCTGGCTCCGTGAAGCTGAATGTGGAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS CCA 90 bp CAAGATTCTACCTCTGCACCCTCTTCCTGTCTCTGCAACCTTCTCTaGCACCCAATAAGGAGCCACCAGGGATCTGCACCAGGACCCAGA +
Preference number: 5 (lower is better)
Translates to: QDSTSAPSSCLCNLL*HPIRSHQGSAPGPR
Trigger: TCTGGGTCCTGGTGCAGATCCCTGGTGGCTCCTTATTGGGTGCCAGAGAAGGTTGCAGAGACAGGAAGAGGGTGCAGAGGTAGAATCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497891.1
ENST00000644029.1
CDS GCA 90 bp AGTGGGGTCAGCATTCGGACTCTGACGATGTATGTGGTGTCAGGCTaGAGCTCTGTCAGCAAGACCCTGGGTTCTAGAACCATCTGGTAC +
Preference number: 5 (lower is better)
Translates to: SGVSIRTLTMYVVSG*SSVSKTLGSRTIWY
Trigger: GTACCAGATGGTTCTAGAACCCAGGGTCTTGCTGACAGAGCTGCAGCCTGACACCACATACATCGTCAGAGTCCGAATGCTGACCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000275815.4
ENST00000479459.1
ENST00000488068.5
ENST00000645847.2
ENST00000646228.1
ENST00000647400.1
CDS GCA 90 bp TTCCAGATGCAGAATATGCGGGTGGCTAAACTGGCCCATGATAGTTaGCTCTCGAAGGAAGTTCCACCACTGGCCACCTGGGGATGTGTC +
Preference number: 5 (lower is better)
Translates to: FQMQNMRVAKLAHDS*LSKEVPPLATWGCV
Trigger: GACACATCCCCAGGTGGCCAGTGGTGGAACTTCCTTCGAGAGGCAACTATCATGGGCCAGTTTAGCCACCCGCATATTCTGCATCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000275815.4
ENST00000465208.5
ENST00000488068.5
ENST00000494989.1
ENST00000643917.1
ENST00000645510.1
ENST00000645847.2
ENST00000647400.1
CDS CCA 90 bp CCAATTGGAGCGAAGCCAGTGGTCAGTGTCTCTGCGTCCTTGCATTaGGCAGTCCTGGTACATGTACAGGGGTGTCCCATTCAGTATCTG +
Preference number: 5 (lower is better)
Translates to: PIGAKPVVSVSASLH*AVLVHVQGCPIQYL
Trigger: CAGATACTGAATGGGACACCCCTGTACATGTACCAGGACTGCCCAATGCAAGGACGCAGAGACACTGACCACTGGCTTCGCTCCAATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000497891.1
ENST00000644029.1
ENST00000645847.2
ENST00000647400.1
CDS CCA 90 bp ATGCCTGGAGGTCCACATAAGGCTTCAGCCACAGCTTGTCCTCTATaGGCAGAACATGAGGTTGGGGAGTACCAACATCAGGGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: MPGGPHKASATACPL*AEHEVGEYQHQGSG
Trigger: TCCTGAGCCCTGATGTTGGTACTCCCCAACCTCATGTTCTGCCCATAGAGGACAAGCTGTGGCTGAAGCCTTATGTGGACCTCCAGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494989.1
ENST00000645510.1
CDS CCA 90 bp CGAAGCCAGTGGTCAGTGTCTCTGCGTCCTTGCATTGGGCAGTCCTaGTACATGTACAGGGGTGTCCCATTCAGTATCTGTTGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: RSQWSVSLRPCIGQS*YMYRGVPFSICCCS
Trigger: TGAACAGCAACAGATACTGAATGGGACACCCCTGTACATGTACCAGGACTGCCCAATGCAAGGACGCAGAGACACTGACCACTGGCTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000497891.1
ENST00000644029.1
ENST00000645847.2
ENST00000647400.1
CDS CCA 90 bp TTTGTGACGACGCCTTCCAGATGCAGAATATGCGGGTGGCTAAACTaGCCCATGATAGTTGCCTCTCGAAGGAAGTTCCACCACTGGCCA +
Preference number: 5 (lower is better)
Translates to: FVTTPSRCRICGWLN*PMIVASRRKFHHWP
Trigger: TGGCCAGTGGTGGAACTTCCTTCGAGAGGCAACTATCATGGGCCAGTTTAGCCACCCGCATATTCTGCATCTGGAAGGCGTCGTCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000275815.4
ENST00000465208.5
ENST00000488068.5
ENST00000494989.1
ENST00000643917.1
ENST00000645510.1
ENST00000645847.2
ENST00000647400.1
CDS CCA 90 bp CACACACTTCTCCACACCTCCCTGTTTCCCAAGGTGACTCCTGTTTaGGCTGAGGTGGGAGAAAGTCTCCATTTAGCAACTAGGCCTTTC +
Preference number: 5 (lower is better)
Translates to: HTLLHTSLFPKVTPV*AEVGESLHLATRPF
Trigger: GAAAGGCCTAGTTGCTAAATGGAGACTTTCTCCCACCTCAGCCCAAACAGGAGTCACCTTGGGAAACAGGGAGGTGTGGAGAAGTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494989.1
ENST00000645510.1
CDS CCA 90 bp CTAAACTGGCCCATGATAGTTGCCTCTCGAAGGAAGTTCCACCACTaGCCACCTGGGGATGTGTCTTTTAAGGTCTTAATGGCCACAGTC +
Preference number: 5 (lower is better)
Translates to: LNWPMIVASRRKFHH*PPGDVSFKVLMATV
Trigger: GACTGTGGCCATTAAGACCTTAAAAGACACATCCCCAGGTGGCCAGTGGTGGAACTTCCTTCGAGAGGCAACTATCATGGGCCAGTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000275815.4
ENST00000465208.5
ENST00000488068.5
ENST00000494989.1
ENST00000643917.1
ENST00000645510.1
ENST00000645847.2
ENST00000647400.1
CDS GCA 90 bp CCAAATTCTTTTCAAGATTCTACCTCTGCACCCTCTTCCTGTCTCTaGAACCTTCTCTGGCACCCAATAAGGAGCCACCAGGGATCTGCA +
Preference number: 5 (lower is better)
Translates to: PNSFQDSTSAPSSCL*NLLWHPIRSHQGSA
Trigger: TGCAGATCCCTGGTGGCTCCTTATTGGGTGCCAGAGAAGGTTGCAGAGACAGGAAGAGGGTGCAGAGGTAGAATCTTGAAAAGAATTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497891.1
ENST00000644029.1
CDS GCA 90 bp CATGCCCAGCCTTCAAGCGCCAAATTCTTTTCAAGATTCTACCTCTaGACCCTCTTCCTGTCTCTGCAACCTTCTCTGGCACCCAATAAG +
Preference number: 5 (lower is better)
Translates to: HAQPSSAKFFSRFYL*TLFLSLQPSLAPNK
Trigger: CTTATTGGGTGCCAGAGAAGGTTGCAGAGACAGGAAGAGGGTGCAGAGGTAGAATCTTGAAAAGAATTTGGCGCTTGAAGGCTGGGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497891.1
ENST00000644029.1
CDS-3UTR CAA 90 bp TGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACCGGCTTCAGCCACAGCTaGTCCTCTCGATCCACATCG +
Preference number: 5 (lower is better)
Translates to: CIYINPSAPSHDHPFTSTGFSHS*SSRSTS
Trigger: CGATGTGGATCGAGAGGACAAGCTGTGGCTGAAGCC...GGTAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CAA 90 bp GTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTGGCTTCAGCCACAGCTaGTCCTCTCGATCCACATCG +
Preference number: 5 (lower is better)
Translates to: VCIYINPSAPSHDHPFTSGFSHS*SSRSTS
Trigger: CGATGTGGATCGAGAGGACAAGCTGTGGCTGAAGCC...AGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CAA 90 bp GTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTAGTGTCTCTGCGTCCTaGCATTGGGCAGTCCTGGTA +
Preference number: 5 (lower is better)
Translates to: VCIYINPSAPSHDHPFTSSVSAS*HWAVLV
Trigger: TACCAGGACTGCCCAATGCAAGGACGCAGAGACACT...AGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CAA 90 bp TGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACCTCCATGTACAGAAGGTaGAAGGTCTCCTTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: CIYINPSAPSHDHPFTSTSMYRR*KVSLQP
Trigger: GGGCTGCAAGGAGACCTTCAACCTTCTGTACATGGA...GGTAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CAA 90 bp GTATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTAGCTCTCCCTGTGCCTaGCTTGTGTCCATCAGAGTA +
Preference number: 5 (lower is better)
Translates to: VCIYINPSAPSHDHPFTSSSPCA*LVSIRV
Trigger: TACTCTGATGGACACAAGCAAGGCACAGGGAGAGCT...AGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CAA 90 bp TGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACCCCCATTCAGTATCTGTaGCTGTTCACTCCACCCATC +
Preference number: 5 (lower is better)
Translates to: CIYINPSAPSHDHPFTSTPIQYL*LFTPPI
Trigger: GATGGGTGGAGTGAACAGCAACAGATACTGAATGGG...GGTAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS-3UTR CAA 90 bp TATGTATATATATTAACCCCTCAGCTCCCTCCCATGATCATCCTTTTACTTCTACAGAGTGTCTGGGAATaGGGCCAAGCCATTCAGGGT +
Preference number: 5 (lower is better)
Translates to: YVYILTPQLPPMIILLLLQSVWE*GQAIQG
Trigger: ACCCTGAATGGCTTGGCCCAATTCCCAGACACTCTG...TAGAAGTAAAAGGATGATCATGGGAGGGAGCTGAGGGGTTAATATATATACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS GCA 90 bp TGTAAGGAAAAAGGAAATAACCTTAGTAACTTTTCTATGGCTTCCTaGCCATCAGTTTGTTCTGTGGTCTTAAGCCCTTCTGTCTCCACC +
Preference number: 5 (lower is better)
Translates to: CKEKGNNLSNFSMAS*PSVCSVVLSPSVST
Trigger: GGTGGAGACAGAAGGGCTTAAGACCACAGAACAAACTGATGGGCAGGAAGCCATAGAAAAGTTACTAAGGTTATTTCCTTTTTCCTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000488068.5
ENST00000647400.1
CDS GCA 72 bp CGATCCACATCGGTGGCGCGGTCACGCTGCCTCTGCTaGCTCTGCCGCTGGGCTCTCCTGGACCGGAAAACG +
Preference number: 6 (lower is better)
Translates to: RSTSVARSRCLC*LCRWALLDRKT
Trigger: CGTTTTCCGGTCCAGGAGAGCCCAGCGGCAGAGGCAGCAGAGGCAGCGTGACCGCGCCACCGATGTGGATCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS GCA 72 bp TCTCGATCCACATCGGTGGCGCGGTCACGCTGCCTCTaGTGCCTCTGCCGCTGGGCTCTCCTGGACCGGAAA +
Preference number: 6 (lower is better)
Translates to: SRSTSVARSRCL*CLCRWALLDRK
Trigger: TTTCCGGTCCAGGAGAGCCCAGCGGCAGAGGCAGCAGAGGCAGCGTGACCGCGCCACCGATGTGGATCGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS GCA 72 bp ACATCGGTGGCGCGGTCACGCTGCCTCTGCTGCCTCTaGCGCTGGGCTCTCCTGGACCGGAAAACGAGAATC +
Preference number: 6 (lower is better)
Translates to: TSVARSRCLCCL*RWALLDRKTRI
Trigger: GATTCTCGTTTTCCGGTCCAGGAGAGCCCAGCGGCAGAGGCAGCAGAGGCAGCGTGACCGCGCCACCGATGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS CCA 72 bp GCTTCAGCCACAGCTTGTCCTCTCGATCCACATCGGTaGCGCGGTCACGCTGCCTCTGCTGCCTCTGCCGCT +
Preference number: 6 (lower is better)
Translates to: ASATACPLDPHR*RGHAASAASAA
Trigger: AGCGGCAGAGGCAGCAGAGGCAGCGTGACCGCGCCACCGATGTGGATCGAGAGGACAAGCTGTGGCTGAAGC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS CAA 90 bp GGCGCAGGGAGTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTaGCACCCTGATTGGGCATGGGGTGAGAGGAGGGATCAGTCCTTG +
Preference number: 6 (lower is better)
Translates to: GAGSDHERPWPRPCS*HPDWAWGERRDQSL
Trigger: CAAGGACTGATCCCTCCTCTCACCCCATGCCCAATCAGGGTGCAAGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCACTCCCTGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS CAA 90 bp CGCCACTTCCACCAACCCAGCGGGGCCAGGCAGAGTGTCTGGGAATaGGGCCAAGCCATTCAGGGTCTCAGGACAGCGCTGGTAGAAGAC +
Preference number: 6 (lower is better)
Translates to: RHFHQPSGARQSVWE*GQAIQGLRTALVED
Trigger: GTCTTCTACCAGCGCTGTCCTGAGACCCTGAATGGCTTGGCCCAATTCCCAGACACTCTGCCTGGCCCCGCTGGGTTGGTGGAAGTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS TCA 72 bp GCCGGCGGGCACGGTCATATGCCCAGCAGTTCTTCATaGGCTCATACAGAGGGGCAGGGCAGTCCACAGGAG +
Preference number: 6 (lower is better)
Translates to: AGGHGHMPSSSS*AHTEGQGSPQE
Trigger: CTCCTGTGGACTGCCCTGCCCCTCTGTATGAGCTCATGAAGAACTGCTGGGCATATGACCGTGCCCGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS TCA 72 bp GAGTGGGGGTTGGCAAGCAGTTGCTCCAGATGTGCCTaGAGCTTCTGGAAGTGTGGCCGGCGGGCACGGTCA +
Preference number: 6 (lower is better)
Translates to: EWGLASSCSRCA*SFWKCGRRARS
Trigger: TGACCGTGCCCGCCGGCCACACTTCCAGAAGCTTCAGGCACATCTGGAGCAACTGCTTGCCAACCCCCACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS GCA 72 bp CTTCGGGGCCGGGACCCCGCCCAGGTCAGCTCTAGTTaGCTCGGTTCTTTCTTCACCAGTCTCAGAGACAGG +
Preference number: 6 (lower is better)
Translates to: LRGRDPAQVSSS*LGSFFTSLRDR
Trigger: CCTGTCTCTGAGACTGGTGAAGAAAGAACCGAGGCAACTAGAGCTGACCTGGGCGGGGTCCCGGCCCCGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000275815.4
ENST00000479459.1
ENST00000488068.5
ENST00000645847.2
ENST00000646228.1
ENST00000647400.1
CDS GCA 72 bp ATGCGCTTCTGGTGCCCGGGCAGTGTGATTCCCATCTaGGTCAGGTCCTCAGCGGTCAGCTCCAGCACACAC +
Preference number: 6 (lower is better)
Translates to: MRFWCPGSVIPI*VRSSAVSSSTH
Trigger: GTGTGTGCTGGAGCTGACCGCTGAGGACCTGACGCAGATGGGAATCACACTGCCCGGGCACCAGAAGCGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS GCA 72 bp GTGACCATGAGCGACCTTGGCCCCGTCCTTGCTCCTTaGACCCTGATTGGGCATGGGGTGAGAGGAGGGATC +
Preference number: 6 (lower is better)
Translates to: VTMSDLGPVLAP*TLIGHGVRGGI
Trigger: GATCCCTCCTCTCACCCCATGCCCAATCAGGGTGCAAGGAGCAAGGACGGGGCCAAGGTCGCTCATGGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS CCA 72 bp GGACGCGGGAAGCCTCCTCCCCGCGGTAGATCCAATTaGAGCGAAGCCAGTGGTCAGTGTCTCTGCGTCCTT +
Preference number: 6 (lower is better)
Translates to: GRGKPPPRGRSN*SEASGQCLCVL
Trigger: AAGGACGCAGAGACACTGACCACTGGCTTCGCTCCAATTGGATCTACCGCGGGGAGGAGGCTTCCCGCGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000497891.1
ENST00000644029.1
ENST00000645847.2
ENST00000647400.1
CDS CCA 72 bp GAGCTCTGTAATGGCCGCTCTCACAGGTACAGATGGTaGCCCCCTCAGACTCAGCAGTGCTCTGCTGGGGGC +
Preference number: 6 (lower is better)
Translates to: ELCNGRSHRYRW*PPQTQQCSAGG
Trigger: GCCCCCAGCAGAGCACTGCTGAGTCTGAGGGGGCCACCATCTGTACCTGTGAGAGCGGCCATTACAGAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS CCA 72 bp CGGGAGCTCTGTAATGGCCGCTCTCACAGGTACAGATaGTGGCCCCCTCAGACTCAGCAGTGCTCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: RELCNGRSHRYR*WPPQTQQCSAG
Trigger: CCCAGCAGAGCACTGCTGAGTCTGAGGGGGCCACCATCTGTACCTGTGAGAGCGGCCATTACAGAGCTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS CAA 90 bp GTCAAAGTTGGCAATGGTCCGCAGGGAGTGGGGGTTGGCAAGCAGTaGCTCCAGATGTGCCTGAAGCTTCTGGAAGTGTGGCCGGCGGGC +
Preference number: 6 (lower is better)
Translates to: VKVGNGPQGVGVGKQ*LQMCLKLLEVWPAG
Trigger: GCCCGCCGGCCACACTTCCAGAAGCTTCAGGCACATCTGGAGCAACTGCTTGCCAACCCCCACTCCCTGCGGACCATTGCCAACTTTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS TCA 72 bp TGCCCACATCCTGGTCACTCTCCATGTACAGAAGGTTaGAGGTCTCCTTGCAGCCCAGAGGCCCGGCTCCCC +
Preference number: 6 (lower is better)
Translates to: CPHPGHSPCTEG*RSPCSPEARLP
Trigger: GGGGAGCCGGGCCTCTGGGCTGCAAGGAGACCTTCAACCTTCTGTACATGGAGAGTGACCAGGATGTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000497891.1
ENST00000644029.1
ENST00000645847.2
ENST00000647400.1
CDS GCA 72 bp CAGGGGAGCAAGCACCTTGGGAGCAGCTCTACCCACTaGTTGCCCTCTTGCAGGAAGGTCCTAGTGGGTGAC +
Preference number: 6 (lower is better)
Translates to: QGSKHLGSSSTH*LPSCRKVLVGD
Trigger: GTCACCCACTAGGACCTTCCTGCAAGAGGGCAAGCAGTGGGTAGAGCTGCTCCCAAGGTGCTTGCTCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458129.1
ENST00000642708.1
CDS CCA 72 bp TCAGGTCCTCAGCGGTCAGCTCCAGCACACACTCCATaGTGTCCAGCCCAGCCGAGTGGAAGTGCAGGATGT +
Preference number: 6 (lower is better)
Translates to: SGPQRSAPAHTP*CPAQPSGSAGC
Trigger: ACATCCTGCACTTCCACTCGGCTGGGCTGGACACCATGGAGTGTGTGCTGGAGCTGACCGCTGAGGACCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS TCA 72 bp CAAGCAGCAAGGCTGCACCAAGCAGCAGCCCAAAGATaGCGGCTACAATCTCTCCTCCAGTCAGGCCCCTGG +
Preference number: 6 (lower is better)
Translates to: QAARLHQAAAQR*RLQSLLQSGPW
Trigger: CCAGGGGCCTGACTGGAGGAGAGATTGTAGCCGTCATCTTTGGGCTGCTGCTTGGTGCAGCCTTGCTGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000275815.4
ENST00000479459.1
ENST00000488068.5
ENST00000645847.2
ENST00000646228.1
ENST00000647400.1
CDS GCA 72 bp TGGATCAAGCTCCCGGGTAAAGTCCAGGGCTCCCTGTaGAGGGTCCTCGTATGCCTGGAGGTCCACATAAGG +
Preference number: 6 (lower is better)
Translates to: WIKLPGKVQGSL*RVLVCLEVHIR
Trigger: CCTTATGTGGACCTCCAGGCATACGAGGACCCTGCACAGGGAGCCCTGGACTTTACCCGGGAGCTTGATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000494989.1
ENST00000645510.1
ENST00000645847.2
ENST00000647400.1
CDS GCA 72 bp CCTTCTCTGGCACCCAATAAGGAGCCACCAGGGATCTaGACCAGGACCCAGATGGCATGGAGGGAAGCAGCA +
Preference number: 6 (lower is better)
Translates to: PSLAPNKEPPGI*TRTQMAWREAA
Trigger: TGCTGCTTCCCTCCATGCCATCTGGGTCCTGGTGCAGATCCCTGGTGGCTCCTTATTGGGTGCCAGAGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497891.1
ENST00000644029.1
CDS CCA 72 bp CGACCTTGGCCCCGTCCTTGCTCCTTGCACCCTGATTaGGCATGGGGTGAGAGGAGGGATCAGTCCTTGAAT +
Preference number: 6 (lower is better)
Translates to: RPWPRPCSLHPD*AWGERRDQSLN
Trigger: ATTCAAGGACTGATCCCTCCTCTCACCCCATGCCCAATCAGGGTGCAAGGAGCAAGGACGGGGCCAAGGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275815.4
ENST00000645847.2
CDS CAA 72 bp GGCAATGGTCCGCAGGGAGTGGGGGTTGGCAAGCAGTaGCTCCAGATGTGCCTGAAGCTTCTGGAAGTGTGG +
Preference number: 6 (lower is better)
Translates to: GNGPQGVGVGKQ*LQMCLKLLEVW
Trigger: CCACACTTCCAGAAGCTTCAGGCACATCTGGAGCAACTGCTTGCCAACCCCCACTCCCTGCGGACCATTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS TCA 72 bp AAGGGCCAGGACCCAGTGGGGTCAGCATTCGGACTCTaGCGATGTATGTGGTGTCAGGCTGCAGCTCTGTCA +
Preference number: 6 (lower is better)
Translates to: KGQDPVGSAFGL*RCMWCQAAALS
Trigger: TGACAGAGCTGCAGCCTGACACCACATACATCGTCAGAGTCCGAATGCTGACCCCACTGGGTCCTGGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000275815.4
ENST00000479459.1
ENST00000488068.5
ENST00000645847.2
ENST00000646228.1
ENST00000647400.1
CDS TCA 72 bp GAGCCACTCAGAGACGGTTCGATATGGGATCCCATCTaGGCCACTCAGGCTGGGCAGGCGAAGAGTCATCCT +
Preference number: 6 (lower is better)
Translates to: EPLRDGSIWDPI*ATQAGQAKSHP
Trigger: AGGATGACTCTTCGCCTGCCCAGCCTGAGTGGCTCAGATGGGATCCCATATCGAACCGTCTCTGAGTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS GCA 72 bp GCCAGACACAAGGTCTCGAATGGTGAAGCTCTGGTCTaGAGCCACCGTGGTTACCTTCTGGAACAAGGGCCG +
Preference number: 6 (lower is better)
Translates to: ARHKVSNGEALV*SHRGYLLEQGP
Trigger: CGGCCCTTGTTCCAGAAGGTAACCACGGTGGCTGCAGACCAGAGCTTCACCATTCGAGACCTTGTGTCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS GCA 72 bp GGTAAAGTCCAGGGCTCCCTGTGCAGGGTCCTCGTATaGCTGGAGGTCCACATAAGGCTTCAGCCACAGCTT +
Preference number: 6 (lower is better)
Translates to: GKVQGSLCRVLV*LEVHIRLQPQL
Trigger: AAGCTGTGGCTGAAGCCTTATGTGGACCTCCAGGCATACGAGGACCCTGCACAGGGAGCCCTGGACTTTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000494989.1
ENST00000645510.1
ENST00000645847.2
ENST00000647400.1
CDS CCA 72 bp TCCTTCTCCTATGACAGTGTCCACCATCAGCCACGCTaGATCAAGCTCCCGGGTAAAGTCCAGGGCTCCCTG +
Preference number: 6 (lower is better)
Translates to: SFSYDSVHHQPR*IKLPGKVQGSL
Trigger: CAGGGAGCCCTGGACTTTACCCGGGAGCTTGATCCAGCGTGGCTGATGGTGGACACTGTCATAGGAGAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000494989.1
ENST00000645510.1
ENST00000645847.2
ENST00000647400.1
CDS TCA 72 bp GCATGGGGTGAGAGGAGGGATCAGTCCTTGAATCCCTaGATACTGCAAAGAATGCGCTTCTGGTGCCCGGGC +
Preference number: 6 (lower is better)
Translates to: AWGERRDQSLNP*ILQRMRFWCPG
Trigger: GCCCGGGCACCAGAAGCGCATTCTTTGCAGTATTCAGGGATTCAAGGACTGATCCCTCCTCTCACCCCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS TCA 72 bp GGAAGCAGCACCTTCTGGAACAAGGGCCGTCGGAGCTaGATGCCCACATCCTGGTCACTCTCCATGTACAGA +
Preference number: 6 (lower is better)
Translates to: GSSTFWNKGRRS*MPTSWSLSMYR
Trigger: TCTGTACATGGAGAGTGACCAGGATGTGGGCATTCAGCTCCGACGGCCCTTGTTCCAGAAGGTGCTGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497891.1
ENST00000644029.1
CDS GCA 72 bp GCCCAGCCGAGTGGAAGTGCAGGATGTAGCGTTTCATaGGTATGGACTCGAGCCACTCAGAGACGGTTCGAT +
Preference number: 6 (lower is better)
Translates to: AQPSGSAGCSVS*VWTRATQRRFD
Trigger: ATCGAACCGTCTCTGAGTGGCTCGAGTCCATACGCATGAAACGCTACATCCTGCACTTCCACTCGGCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS GCA 72 bp GCAGCACCTTCTGGAACAAGGGCCGTCGGAGCTGAATaGCCACATCCTGGTCACTCTCCATGTACAGAAGGT +
Preference number: 6 (lower is better)
Translates to: AAPSGTRAVGAE*PHPGHSPCTEG
Trigger: ACCTTCTGTACATGGAGAGTGACCAGGATGTGGGCATTCAGCTCCGACGGCCCTTGTTCCAGAAGGTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497891.1
ENST00000644029.1
CDS CCA 72 bp GCGAAGCCAGTGGTCAGTGTCTCTGCGTCCTTGCATTaGGCAGTCCTGGTACATGTACAGGGGTGTCCCATT +
Preference number: 6 (lower is better)
Translates to: AKPVVSVSASLH*AVLVHVQGCPI
Trigger: AATGGGACACCCCTGTACATGTACCAGGACTGCCCAATGCAAGGACGCAGAGACACTGACCACTGGCTTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000497891.1
ENST00000644029.1
ENST00000645847.2
ENST00000647400.1
CDS CCA 72 bp GGTCAAAGTTGGCAATGGTCCGCAGGGAGTGGGGGTTaGCAAGCAGTTGCTCCAGATGTGCCTGAAGCTTCT +
Preference number: 6 (lower is better)
Translates to: GQSWQWSAGSGG*QAVAPDVPEAS
Trigger: AGAAGCTTCAGGCACATCTGGAGCAACTGCTTGCCAACCCCCACTCCCTGCGGACCATTGCCAACTTTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS CAA 72 bp AGCGAAGCCAGTGGTCAGTGTCTCTGCGTCCTTGCATaGGGCAGTCCTGGTACATGTACAGGGGTGTCCCAT +
Preference number: 6 (lower is better)
Translates to: SEASGQCLCVLA*GSPGTCTGVSH
Trigger: ATGGGACACCCCTGTACATGTACCAGGACTGCCCAATGCAAGGACGCAGAGACACTGACCACTGGCTTCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000497891.1
ENST00000644029.1
ENST00000645847.2
ENST00000647400.1
CDS TCA 72 bp ACCGTGGTTACCTTCTGGAACAAGGGCCGTCGGAGCTaGATGCCCACATCCTGGTCACTCTCCATGTACAGA +
Preference number: 6 (lower is better)
Translates to: TVVTFWNKGRRS*MPTSWSLSMYR
Trigger: TCTGTACATGGAGAGTGACCAGGATGTGGGCATTCAGCTCCGACGGCCCTTGTTCCAGAAGGTAACCACGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS TCA 72 bp GGCTTCAGCCACAGCTTGTCCTCTATGGGCAGAACATaGGGTTGGGGAGTACCAACATCAGGGCTCAGGAGT +
Preference number: 6 (lower is better)
Translates to: GFSHSLSSMGRT*GWGVPTSGLRS
Trigger: ACTCCTGAGCCCTGATGTTGGTACTCCCCAACCTCATGTTCTGCCCATAGAGGACAAGCTGTGGCTGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494989.1
ENST00000645510.1
CDS GCA 72 bp CAGAATATGCGGGTGGCTAAACTGGCCCATGATAGTTaGCTCTCGAAGGAAGTTCCACCACTGGCCACCTGG +
Preference number: 6 (lower is better)
Translates to: QNMRVAKLAHDS*LSKEVPPLATW
Trigger: CCAGGTGGCCAGTGGTGGAACTTCCTTCGAGAGGCAACTATCATGGGCCAGTTTAGCCACCCGCATATTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000275815.4
ENST00000465208.5
ENST00000488068.5
ENST00000494989.1
ENST00000643917.1
ENST00000645510.1
ENST00000645847.2
ENST00000647400.1
CDS CAA 72 bp ATTGGAGCGAAGCCAGTGGTCAGTGTCTCTGCGTCCTaGCATTGGGCAGTCCTGGTACATGTACAGGGGTGT +
Preference number: 6 (lower is better)
Translates to: IGAKPVVSVSAS*HWAVLVHVQGC
Trigger: ACACCCCTGTACATGTACCAGGACTGCCCAATGCAAGGACGCAGAGACACTGACCACTGGCTTCGCTCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000497891.1
ENST00000644029.1
ENST00000645847.2
ENST00000647400.1
CDS CAA 72 bp CAGCCACAGCTTGTCCTCTATGGGCAGAACATGAGGTaGGGGAGTACCAACATCAGGGCTCAGGAGTATGGG +
Preference number: 6 (lower is better)
Translates to: QPQLVLYGQNMR*GSTNIRAQEYG
Trigger: CCCATACTCCTGAGCCCTGATGTTGGTACTCCCCAACCTCATGTTCTGCCCATAGAGGACAAGCTGTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494989.1
ENST00000645510.1
CDS CAA 90 bp GTAGATCCAATTGGAGCGAAGCCAGTGGTCAGTGTCTCTGCGTCCTaGCATTGGGCAGTCCTGGTACATGTACAGGGGTGTCCCATTCAG +
Preference number: 6 (lower is better)
Translates to: VDPIGAKPVVSVSAS*HWAVLVHVQGCPIQ
Trigger: CTGAATGGGACACCCCTGTACATGTACCAGGACTGCCCAATGCAAGGACGCAGAGACACTGACCACTGGCTTCGCTCCAATTGGATCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000497891.1
ENST00000644029.1
ENST00000645847.2
ENST00000647400.1
CDS CAA 90 bp ATAAGGCTTCAGCCACAGCTTGTCCTCTATGGGCAGAACATGAGGTaGGGGAGTACCAACATCAGGGCTCAGGAGTATGGGGGTCAGGAG +
Preference number: 6 (lower is better)
Translates to: IRLQPQLVLYGQNMR*GSTNIRAQEYGGQE
Trigger: CTCCTGACCCCCATACTCCTGAGCCCTGATGTTGGTACTCCCCAACCTCATGTTCTGCCCATAGAGGACAAGCTGTGGCTGAAGCCTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494989.1
ENST00000645510.1
CDS GCA 72 bp TGGTTACCTTCTGGAACAAGGGCCGTCGGAGCTGAATaGCCACATCCTGGTCACTCTCCATGTACAGAAGGT +
Preference number: 6 (lower is better)
Translates to: WLPSGTRAVGAE*PHPGHSPCTEG
Trigger: ACCTTCTGTACATGGAGAGTGACCAGGATGTGGGCATTCAGCTCCGACGGCCCTTGTTCCAGAAGGTAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS GCA 72 bp AGCATTCGGACTCTGACGATGTATGTGGTGTCAGGCTaGAGCTCTGTCAGCAAGACCCTGGGTTCTAGAACC +
Preference number: 6 (lower is better)
Translates to: SIRTLTMYVVSG*SSVSKTLGSRT
Trigger: GGTTCTAGAACCCAGGGTCTTGCTGACAGAGCTGCAGCCTGACACCACATACATCGTCAGAGTCCGAATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000275815.4
ENST00000479459.1
ENST00000488068.5
ENST00000645847.2
ENST00000646228.1
ENST00000647400.1
CDS CCA 72 bp AGCTCTGTCAGCAAGACCCTGGGTTCTAGAACCATCTaGTACCGTTCTTCATCCTGGTTCAGCACGTGCAGC +
Preference number: 6 (lower is better)
Translates to: SSVSKTLGSRTI*YRSSSWFSTCS
Trigger: GCTGCACGTGCTGAACCAGGATGAAGAACGGTACCAGATGGTTCTAGAACCCAGGGTCTTGCTGACAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000275815.4
ENST00000479459.1
ENST00000488068.5
ENST00000645847.2
ENST00000646228.1
ENST00000647400.1
CDS CCA 72 bp CCGAGTGGAAGTGCAGGATGTAGCGTTTCATGCGTATaGACTCGAGCCACTCAGAGACGGTTCGATATGGGA +
Preference number: 6 (lower is better)
Translates to: PSGSAGCSVSCV*TRATQRRFDMG
Trigger: TCCCATATCGAACCGTCTCTGAGTGGCTCGAGTCCATACGCATGAAACGCTACATCCTGCACTTCCACTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000645847.2
ENST00000647400.1
CDS CAA 90 bp TCCAATTGGAGCGAAGCCAGTGGTCAGTGTCTCTGCGTCCTTGCATaGGGCAGTCCTGGTACATGTACAGGGGTGTCCCATTCAGTATCT +
Preference number: 6 (lower is better)
Translates to: SNWSEASGQCLCVLA*GSPGTCTGVSHSVS
Trigger: AGATACTGAATGGGACACCCCTGTACATGTACCAGGACTGCCCAATGCAAGGACGCAGAGACACTGACCACTGGCTTCGCTCCAATTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000497891.1
ENST00000644029.1
ENST00000645847.2
ENST00000647400.1
CDS CCA 72 bp TGGTCAGTGTCTCTGCGTCCTTGCATTGGGCAGTCCTaGTACATGTACAGGGGTGTCCCATTCAGTATCTGT +
Preference number: 6 (lower is better)
Translates to: WSVSLRPCIGQS*YMYRGVPFSIC
Trigger: ACAGATACTGAATGGGACACCCCTGTACATGTACCAGGACTGCCCAATGCAAGGACGCAGAGACACTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000275815.4
ENST00000488068.5
ENST00000497891.1
ENST00000644029.1
ENST00000645847.2
ENST00000647400.1
CDS CCA 72 bp ACGCCTTCCAGATGCAGAATATGCGGGTGGCTAAACTaGCCCATGATAGTTGCCTCTCGAAGGAAGTTCCAC +
Preference number: 6 (lower is better)
Translates to: TPSRCRICGWLN*PMIVASRRKFH
Trigger: GTGGAACTTCCTTCGAGAGGCAACTATCATGGGCCAGTTTAGCCACCCGCATATTCTGCATCTGGAAGGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000275815.4
ENST00000465208.5
ENST00000488068.5
ENST00000494989.1
ENST00000643917.1
ENST00000645510.1
ENST00000645847.2
ENST00000647400.1
CDS CCA 72 bp GGTCCACATAAGGCTTCAGCCACAGCTTGTCCTCTATaGGCAGAACATGAGGTTGGGGAGTACCAACATCAG +
Preference number: 6 (lower is better)
Translates to: GPHKASATACPL*AEHEVGEYQHQ
Trigger: CTGATGTTGGTACTCCCCAACCTCATGTTCTGCCCATAGAGGACAAGCTGTGGCTGAAGCCTTATGTGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494989.1
ENST00000645510.1
CDS GCA 72 bp TTTCAAGATTCTACCTCTGCACCCTCTTCCTGTCTCTaGAACCTTCTCTGGCACCCAATAAGGAGCCACCAG +
Preference number: 6 (lower is better)
Translates to: FQDSTSAPSSCL*NLLWHPIRSHQ
Trigger: CTGGTGGCTCCTTATTGGGTGCCAGAGAAGGTTGCAGAGACAGGAAGAGGGTGCAGAGGTAGAATCTTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497891.1
ENST00000644029.1
CDS CCA 72 bp TGTCGATTGAGGCAGATGACAATGGCTGCTTCCCCCTaGACGGTCACGTGCTCTTGTTTTCCAGAATTCTCA +
Preference number: 6 (lower is better)
Translates to: CRLRQMTMAASP*TVTCSCFPEFS
Trigger: TGAGAATTCTGGAAAACAAGAGCACGTGACCGTCCAGGGGGAAGCAGCCATTGTCATCTGCCTCAATCGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458129.1
ENST00000642708.1
CDS GCA 72 bp TCCAGAATTCTCAGTAGTCAGCTCTTTTGTAGTGCCTaGAGCCCTCATGGGTGGGATGGAGGCAGAAAATCA +
Preference number: 6 (lower is better)
Translates to: SRILSSQLFCSA*SPHGWDGGRKS
Trigger: TGATTTTCTGCCTCCATCCCACCCATGAGGGCTGCAGGCACTACAAAAGAGCTGACTACTGAGAATTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458129.1
ENST00000642708.1
CDS CCA 72 bp CCCATGATAGTTGCCTCTCGAAGGAAGTTCCACCACTaGCCACCTGGGGATGTGTCTTTTAAGGTCTTAATG +
Preference number: 6 (lower is better)
Translates to: PMIVASRRKFHH*PPGDVSFKVLM
Trigger: CATTAAGACCTTAAAAGACACATCCCCAGGTGGCCAGTGGTGGAACTTCCTTCGAGAGGCAACTATCATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000275815.4
ENST00000465208.5
ENST00000488068.5
ENST00000494989.1
ENST00000643917.1
ENST00000645510.1
ENST00000645847.2
ENST00000647400.1
CDS GCA 72 bp AAAGGAAATAACCTTAGTAACTTTTCTATGGCTTCCTaGCCATCAGTTTGTTCTGTGGTCTTAAGCCCTTCT +
Preference number: 6 (lower is better)
Translates to: KGNNLSNFSMAS*PSVCSVVLSPS
Trigger: AGAAGGGCTTAAGACCACAGAACAAACTGATGGGCAGGAAGCCATAGAAAAGTTACTAAGGTTATTTCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488068.5
ENST00000647400.1